Citrus Sinensis ID: 013505
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 441 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYG7 | 508 | Aldehyde dehydrogenase fa | yes | no | 1.0 | 0.868 | 0.807 | 0.0 | |
| Q41247 | 494 | Aldehyde dehydrogenase fa | N/A | no | 1.0 | 0.892 | 0.808 | 0.0 | |
| Q9ZPB7 | 508 | Aldehyde dehydrogenase fa | N/A | no | 1.0 | 0.868 | 0.777 | 0.0 | |
| P25795 | 508 | Aldehyde dehydrogenase fa | N/A | no | 0.979 | 0.850 | 0.759 | 0.0 | |
| P83401 | 509 | Putative aldehyde dehydro | yes | no | 0.988 | 0.856 | 0.554 | 1e-145 | |
| Q2KJC9 | 539 | Alpha-aminoadipic semiald | yes | no | 0.984 | 0.805 | 0.557 | 1e-145 | |
| P49419 | 539 | Alpha-aminoadipic semiald | yes | no | 0.984 | 0.805 | 0.559 | 1e-144 | |
| Q9DBF1 | 539 | Alpha-aminoadipic semiald | yes | no | 0.984 | 0.805 | 0.555 | 1e-144 | |
| Q64057 | 539 | Alpha-aminoadipic semiald | yes | no | 0.984 | 0.805 | 0.550 | 1e-143 | |
| P46562 | 531 | Putative aldehyde dehydro | yes | no | 0.984 | 0.817 | 0.541 | 1e-139 |
| >sp|Q9SYG7|AL7B4_ARATH Aldehyde dehydrogenase family 7 member B4 OS=Arabidopsis thaliana GN=ALDH7B4 PE=2 SV=3 | Back alignment and function desciption |
|---|
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/441 (80%), Positives = 398/441 (90%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M A EYEFLSEIGL+ G +V GKW+A+GP VS++NP NNQ IA VVEASLEDYE+
Sbjct: 1 MGSANNEYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQ 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+KAC EA+KIWM++ APKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEV
Sbjct: 61 GLKACEEAAKIWMQVTAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPLITIA+TKLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTAMCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS++VG MVQQTV+ R GK LLELSGNNAII+MDDADI+LA RSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSRVGSMVQQTVNARSGKTLLELSGNNAIIVMDDADIQLAARSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HES+Y VL+QL+ YKQVKIG+PLEKGTLLGPLHTPES+KNFEKGIE IKS
Sbjct: 301 TTCRRLLLHESVYDKVLEQLLTSYKQVKIGNPLEKGTLLGPLHTPESKKNFEKGIEVIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGG +E EGNFV+PTI+EIS A +VKEELFAPVLYV+KF++F EAV INNSV
Sbjct: 361 QGGKILTGGKAVEGEGNFVEPTIIEISADAAVVKEELFAPVLYVLKFKSFGEAVAINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLG 441
PQGLSSSIFTR+PENIF+W+G
Sbjct: 421 PQGLSSSIFTRNPENIFRWIG 441
|
Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q41247|AL7A1_BRANA Aldehyde dehydrogenase family 7 member A1 OS=Brassica napus GN=BTG-26 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/444 (80%), Positives = 395/444 (88%), Gaps = 3/444 (0%)
Query: 1 MEFAKQEYEFLSEIGLSP-ETPGCFVNGKWKAHGPTVSSINPVNNQ--KIATVVEASLED 57
M A +EYEFLSEIGLS G +V GKW +GP VS++NP NNQ IA VVEASLED
Sbjct: 1 MGSASKEYEFLSEIGLSSSHNLGNYVGGKWLGNGPLVSTLNPANNQVLPIAQVVEASLED 60
Query: 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117
YE G+KAC EA+K WM++PAPKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEV
Sbjct: 61 YEIGLKACEEAAKTWMQVPAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEV 120
Query: 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177
QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 121 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACI 180
Query: 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRI 237
ALVCGNCVVWKGAPTTPLITIA+TKLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI
Sbjct: 181 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNHLPGAIFTAMCGGAEIGEAIAKDTRI 240
Query: 238 SLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAG 297
LVSFTGS+KVGL VQQTV R GK LLELSGNNAII+MDDADI+LA RSVLFAAVGTAG
Sbjct: 241 PLVSFTGSSKVGLTVQQTVSARSGKTLLELSGNNAIIVMDDADIQLAARSVLFAAVGTAG 300
Query: 298 QRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357
QRCTTCRRLL+HES+Y VL+QL+ YKQVKIGDPLEKGTLLGPLHTPES+KNFEKGIE
Sbjct: 301 QRCTTCRRLLLHESVYDKVLEQLLTSYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEV 360
Query: 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN 417
IKSQGGK+LTGG +E EGNFV+PTI+EIS A +VKEELFAPVLY +KF+TFEEAV IN
Sbjct: 361 IKSQGGKVLTGGKAVEGEGNFVEPTIIEISSDAAVVKEELFAPVLYALKFKTFEEAVAIN 420
Query: 418 NSVPQGLSSSIFTRSPENIFKWLG 441
NSVPQGLSSSIFTRSP+NIFKW+G
Sbjct: 421 NSVPQGLSSSIFTRSPDNIFKWIG 444
|
Brassica napus (taxid: 3708) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q9ZPB7|AL7A1_MALDO Aldehyde dehydrogenase family 7 member A1 OS=Malus domestica PE=1 SV=3 | Back alignment and function description |
|---|
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/441 (77%), Positives = 394/441 (89%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FAK+E+EFLS IGL+PE PG F+NGKWKA GP +S+++P NNQ+IA V E S+E+YEE
Sbjct: 1 MGFAKKEHEFLSAIGLAPENPGGFINGKWKASGPVISTVSPSNNQEIAKVTEVSMEEYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+++C++A+K W LPAPKRGE+VRQIGDALREKL HLG+L+S+EMGKIL EGIGEVQEV
Sbjct: 61 GLRSCNDAAKTWKSLPAPKRGEIVRQIGDALREKLQHLGKLVSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
I MCDFAVGLSRQLNGS+IPSERP+HMM E WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IYMCDFAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPL+TIA+TKL++EV E+N LP AIFT+FCGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLVTIAVTKLIAEVLEKNNLPAAIFTAFCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVG VQQ V +RFGKCLLELSGNNA+I+MDDAD+ LAVRS+ FAAVGTAGQRC
Sbjct: 241 SFTGSSKVGAKVQQIVTERFGKCLLELSGNNALIVMDDADVGLAVRSIFFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRL +HESIYQ VLD+LV +Y QVKIGDPLE+GTL+GP+HT SR+NFEKGI IKS
Sbjct: 301 TTCRRLYLHESIYQNVLDKLVGLYNQVKIGDPLEEGTLVGPVHTKASRENFEKGISTIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGGSVIES+GNFVQPTIVEI+ A +VKEELF PVLYVMKF+T EEA+ +NNSV
Sbjct: 361 QGGKILTGGSVIESDGNFVQPTIVEIASNASVVKEELFGPVLYVMKFKTLEEAIALNNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLG 441
PQGLSSSIFT P IFKW+G
Sbjct: 421 PQGLSSSIFTSKPNTIFKWIG 441
|
May play a role in fruit development. Malus domestica (taxid: 3750) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P25795|AL7A1_PEA Aldehyde dehydrogenase family 7 member A1 OS=Pisum sativum PE=1 SV=3 | Back alignment and function description |
|---|
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/432 (75%), Positives = 376/432 (87%)
Query: 10 FLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS 69
FL EIGL G F+NG+WKA+GPTV S+NP NQ IA+V EA+L+DYEEG++A SEA+
Sbjct: 10 FLKEIGLGATNIGSFINGQWKANGPTVHSVNPSTNQVIASVTEATLDDYEEGLRASSEAA 69
Query: 70 KIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVG 129
K W +PAPKRGE+VRQIGDALR KL LGRL+++EMGKIL EGIGEVQE+IDMCD++VG
Sbjct: 70 KTWRTVPAPKRGEIVRQIGDALRAKLDPLGRLVALEMGKILAEGIGEVQEIIDMCDYSVG 129
Query: 130 LSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKG 189
LSRQLNGS+IPSERP HMM E WNPLG+VGVITAFNFPCAVLGWNACIALV GN VVWKG
Sbjct: 130 LSRQLNGSIIPSERPEHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVGGNTVVWKG 189
Query: 190 APTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
APTTPLIT+A+TKL++EVFERN LPGAIFT+ CGGA+IG AIAKD RI LVSFTGS+KVG
Sbjct: 190 APTTPLITVAVTKLIAEVFERNNLPGAIFTALCGGADIGHAIAKDTRIPLVSFTGSSKVG 249
Query: 250 LMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+VQQTV QRFGK LLELSGNNAII+MDDADI LAVRS+ FAAVGTAGQRCTTCRRL +H
Sbjct: 250 ALVQQTVSQRFGKTLLELSGNNAIIVMDDADITLAVRSIFFAAVGTAGQRCTTCRRLYLH 309
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
ES+Y VL+QL +YKQVKIG+PLE+GTL+GPLHT + +NF+ GI IKSQGGKI+TGG
Sbjct: 310 ESVYANVLEQLTALYKQVKIGNPLEEGTLVGPLHTRSAVENFKNGISAIKSQGGKIVTGG 369
Query: 370 SVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429
SV+ESEGNFV PTIVEIS A +VKEELFAPVLYVMKF+ EEA+ +NNSVPQGLSSSIF
Sbjct: 370 SVLESEGNFVVPTIVEISADAAVVKEELFAPVLYVMKFKDLEEAIALNNSVPQGLSSSIF 429
Query: 430 TRSPENIFKWLG 441
T+ P IFKW+G
Sbjct: 430 TQKPSTIFKWIG 441
|
Pisum sativum (taxid: 3888) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P83401|AL7A1_DICDI Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Dictyostelium discoideum GN=DDB_G0276821 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/438 (55%), Positives = 323/438 (73%), Gaps = 2/438 (0%)
Query: 6 QEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKAC 65
EY FL+E+G+ E NGKW G + +NP NN+ IATV A+ E+YE ++A
Sbjct: 5 NEYPFLAELGIKAENNDGVFNGKWGGAGEIIKCLNPTNNKVIATVRGAAPEEYETCIQAM 64
Query: 66 SEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCD 125
A W PAP+RGE+VR IG A+REK+ L +L+S+EMGKI E GEVQE ID+CD
Sbjct: 65 LAAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKIYIEAKGEVQEFIDVCD 124
Query: 126 FAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCV 185
+A GLSR +NG V+PSERPNH+++ETWNPLG+VG+ITAFNFPCAVLGWNA I+++CGN
Sbjct: 125 YATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAFNFPCAVLGWNAAISMICGNVQ 184
Query: 186 VWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244
+WKGA TT LIT+A++K++ +V N + A+ G G +G+ + +D R L+SFTG
Sbjct: 185 LWKGASTTSLITLAVSKIIEKVLVENDVDPAVCCVLIGPGRTVGEQMIQDKRFGLISFTG 244
Query: 245 STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCR 304
ST+VG + TVH FGK +LEL GNNAI++ +DADI+L +R+VLFA+VGT GQRCTTCR
Sbjct: 245 STEVGRRISSTVHGYFGKTILELGGNNAIVVAEDADIELVLRAVLFASVGTTGQRCTTCR 304
Query: 305 RLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
RL +HES+Y T+L++L YK +KIG+PLE+G L+GPLHT + K F +G+E IK QGGK
Sbjct: 305 RLFVHESLYDTILERLTKAYKTIKIGNPLEEGVLVGPLHTQSAVKEFTEGLEEIKKQGGK 364
Query: 365 ILTGGSVIE-SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
++ GG+ ++ S GNFV+PT+V I A IVK ELF P+LY+MKF+ ++A NN VPQG
Sbjct: 365 VVIGGNKLDISGGNFVEPTVVAIEHDAPIVKTELFVPILYIMKFKNLDDAFAWNNEVPQG 424
Query: 424 LSSSIFTRSPENIFKWLG 441
LSSS+FT + +NIFKWLG
Sbjct: 425 LSSSLFTNNQKNIFKWLG 442
|
Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q2KJC9|AL7A1_BOVIN Alpha-aminoadipic semialdehyde dehydrogenase OS=Bos taurus GN=ALDH7A1 PE=2 SV=4 | Back alignment and function description |
|---|
Score = 514 bits (1323), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/436 (55%), Positives = 318/436 (72%), Gaps = 2/436 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE ++
Sbjct: 38 QYAWLKELGLREENDGVY-NGSWGGRGEVITTYCPANNEPIARVRQASMADYEETVEKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA IW ++PAPKRGEVVRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWSIWADVPAPKRGEVVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNACL 216
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKGAPTT LI++A+TK++++V E NKLPGAI + CGGA+IG A+AKD R+ L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVDLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNNAII +DAD+ L V S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVALMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 337 FLHESIHDEVVNRLKKAYAQIRVGNPWDSNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A IV E FAP+LYV KF+ +E NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTIVTGLDHDASIVHTETFAPILYVFKFKNEDEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLG 441
SSIFT+ IF+WLG
Sbjct: 457 SSIFTKDMGRIFRWLG 472
|
Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|P49419|AL7A1_HUMAN Alpha-aminoadipic semialdehyde dehydrogenase OS=Homo sapiens GN=ALDH7A1 PE=1 SV=5 | Back alignment and function description |
|---|
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/436 (55%), Positives = 318/436 (72%), Gaps = 2/436 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE +K
Sbjct: 38 QYAWLKELGLREENEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA KIW ++PAPKRGE+VRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSER H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCL 216
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKGAPTT LI++A+TK++++V E NKLPGAI + CGGA+IG A+AKD R++L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNNAII +DAD+ L V S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
IHESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 337 FIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A I E FAP+LYV KF+ EE NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLG 441
SSIFT+ IF+WLG
Sbjct: 457 SSIFTKDLGRIFRWLG 472
|
Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q9DBF1|AL7A1_MOUSE Alpha-aminoadipic semialdehyde dehydrogenase OS=Mus musculus GN=Aldh7a1 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 510 bits (1314), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/436 (55%), Positives = 319/436 (73%), Gaps = 2/436 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L ++GL + G + NG W G +++ P NN+ IA V +ASL+DYEE +
Sbjct: 38 QYAWLQDLGLREDNEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASLKDYEETIGKAK 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
+A IW ++PAPKRGE+VR+IGDA REK+ LGRL+S+EMGKIL EGIGEVQE +D+CD+
Sbjct: 97 KAWNIWADIPAPKRGEIVRKIGDAFREKIQLLGRLVSLEMGKILVEGIGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GLSR + G +PSERP H ++E WNPLG+VG+ITAFNFP AV GWN IAL+ GN +
Sbjct: 157 AAGLSRMIGGPTLPSERPGHALIEMWNPLGLVGIITAFNFPVAVFGWNNAIALITGNVCL 216
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKGAPTT L+++A+TK++++V E N LPGAI + CGGA+IG +A+D R++L+SFTGST
Sbjct: 217 WKGAPTTSLVSVAVTKIIAQVLEDNLLPGAICSLVCGGADIGTTMARDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFGK LLEL GNNAII +DAD+ L V SVLFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKEVALMVQERFGKSLLELGGNNAIIAFEDADLSLVVPSVLFAAVGTAGQRCTTVRRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+D+L Y Q+++G+P + L GPLHT ++ F + +E K QGG ++
Sbjct: 337 FLHESIHNEVVDRLRSAYSQIRVGNPWDPNILYGPLHTKQAVSMFVRAVEEAKKQGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV ++ A IV +E FAP+LYV KFQ EE + NN V QGLS
Sbjct: 397 YGGKVMDHPGNYVEPTIVTGLAHDAPIVHQETFAPILYVFKFQDEEEVFEWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLG 441
SSIFT+ IF+WLG
Sbjct: 457 SSIFTKDLGRIFRWLG 472
|
Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|Q64057|AL7A1_RAT Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus GN=Aldh7a1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/436 (55%), Positives = 320/436 (73%), Gaps = 2/436 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L ++GL + G F NG W G +++ P NN+ IA V +AS++DYEE +
Sbjct: 38 QYAWLQDLGLREDNEGVF-NGSWGGRGEVITTYCPANNEPIARVRQASMKDYEETIGKAK 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
+A IW ++PAPKRGE+VR+IGDALREK+ LGRL+S+EMGKIL EGIGEVQE +D+CD+
Sbjct: 97 KAWNIWADIPAPKRGEIVRKIGDALREKIQLLGRLVSLEMGKILVEGIGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GLSR + G +PSERP H ++E WNPLG+VG+ITAFNFP AV GWN IAL+ GN +
Sbjct: 157 AAGLSRMIGGPTLPSERPGHALMEQWNPLGLVGIITAFNFPVAVFGWNNAIALITGNVCL 216
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKGAPTT L++IA+TK++++V E N LPGAI + CGGA++G A+A+D R++L+SFTGST
Sbjct: 217 WKGAPTTSLVSIAVTKIIAKVLEDNLLPGAICSLTCGGADMGTAMARDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFGK LLEL GNNAII +DAD+ L + S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVALMVQERFGKSLLELGGNNAIIAFEDADLSLVLPSALFAAVGTAGQRCTTVRRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+D+L + Y Q+++G+P + L GPLHT ++ F + +E K +GG ++
Sbjct: 337 FLHESIHDEVVDRLKNAYSQIRVGNPWDPNILYGPLHTKQAVSMFVQAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A IV +E FAP+LYV KF+ EE + NN V QGLS
Sbjct: 397 YGGKVMDHPGNYVEPTIVTGLVHDAPIVHKETFAPILYVFKFKNEEEVFEWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLG 441
SSIFT+ IF+WLG
Sbjct: 457 SSIFTKDLGRIFRWLG 472
|
Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 |
| >sp|P46562|AL7A1_CAEEL Putative aldehyde dehydrogenase family 7 member A1 homolog OS=Caenorhabditis elegans GN=alh-9 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 495 bits (1275), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/438 (54%), Positives = 311/438 (71%), Gaps = 4/438 (0%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y FL E+GL+ G F +GKW A G V S P NN IA V +++DYE +
Sbjct: 28 KYGFLKELGLTENNAGVF-HGKWAASGQVVQSFAPANNSPIANVQNGNVQDYEIAISEAK 86
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
+A W E+PAP+RGE+VRQIGD LR +L +LG+L+S+EMGKI EG+GEVQE +D+CD+
Sbjct: 87 KAYNDWCEVPAPRRGEIVRQIGDKLRTQLQNLGKLVSLEMGKISAEGVGEVQEYVDICDY 146
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GLSR L G + PSERP H +LE WNPLGVVGVI+AFNFPCAV GWN +ALV GN VV
Sbjct: 147 ATGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVISAFNFPCAVYGWNNALALVTGNSVV 206
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WK AP+TPL IA+TKLV EV N + A+ + CG ++GQA+ KD R++LVSFTGS+
Sbjct: 207 WKPAPSTPLTAIAVTKLVEEVLVANNVNPALCSLVCGEGDVGQALVKDKRVNLVSFTGSS 266
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
++G +V Q V RFGK LLEL GNNAII+ +DAD+ + V + +FAAVGTAGQRCTT RRL
Sbjct: 267 EIGKIVGQQVQARFGKLLLELGGNNAIIVNEDADLNMVVPATVFAAVGTAGQRCTTTRRL 326
Query: 307 LIHESIYQTVLDQLVDVYKQV--KIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
++H+ +Y VL++L Y Q +IG PL+ T++GPLH ++ ++ + + GGK
Sbjct: 327 IVHDKVYDQVLERLKKAYAQFESRIGCPLDSNTIIGPLHNQQAVGKYKASVAEAVASGGK 386
Query: 365 ILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
I GG V+E +GNFV PTIV + + +V E FAP+LYV+KF T EEA+ INN V QG
Sbjct: 387 IEYGGKVLERDGNFVLPTIVTGLKHDSPVVLRETFAPILYVLKFSTLEEAIAINNEVDQG 446
Query: 424 LSSSIFTRSPENIFKWLG 441
LSSS+FT + +N+FKW+G
Sbjct: 447 LSSSLFTTNIQNVFKWMG 464
|
Caenorhabditis elegans (taxid: 6239) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 441 | ||||||
| 224119508 | 508 | predicted protein [Populus trichocarpa] | 1.0 | 0.868 | 0.843 | 0.0 | |
| 449447906 | 507 | PREDICTED: aldehyde dehydrogenase family | 0.988 | 0.859 | 0.841 | 0.0 | |
| 59860157 | 508 | aldehyde dehydrogenase family 7 member A | 1.0 | 0.868 | 0.832 | 0.0 | |
| 224073640 | 516 | predicted protein [Populus trichocarpa] | 1.0 | 0.854 | 0.819 | 0.0 | |
| 225444704 | 508 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.868 | 0.802 | 0.0 | |
| 242049414 | 509 | hypothetical protein SORBIDRAFT_02g02579 | 0.995 | 0.862 | 0.806 | 0.0 | |
| 224031057 | 509 | unknown [Zea mays] gi|414589591|tpg|DAA4 | 0.995 | 0.862 | 0.804 | 0.0 | |
| 226531366 | 509 | aldehyde dehydrogenase family 7 member A | 0.995 | 0.862 | 0.804 | 0.0 | |
| 312283183 | 508 | unnamed protein product [Thellungiella h | 1.0 | 0.868 | 0.809 | 0.0 | |
| 357158604 | 509 | PREDICTED: LOW QUALITY PROTEIN: aldehyde | 0.995 | 0.862 | 0.806 | 0.0 |
| >gi|224119508|ref|XP_002331178.1| predicted protein [Populus trichocarpa] gi|222873299|gb|EEF10430.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/441 (84%), Positives = 409/441 (92%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FA++EYEFLSEIGLS GC+V+G WKA+GP V+S+NP NNQ IA VVE S+EDYEE
Sbjct: 1 MSFARKEYEFLSEIGLSSRNLGCYVDGTWKANGPVVTSVNPANNQAIAEVVEGSVEDYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
GM+ACSEA+KIWM++P+PKRGE+VRQIGDALR KL LGRL+S+EMGKILPEGIGEVQE+
Sbjct: 61 GMRACSEAAKIWMQVPSPKRGEIVRQIGDALRTKLQELGRLVSLEMGKILPEGIGEVQEI 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDF VGLSRQLNGSVIPSERPNH MLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFCVGLSRQLNGSVIPSERPNHAMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPLITIA+T+LV+ V E+N LP AIFTSFCGGA+IGQAIAKD RISLV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTRLVAGVLEKNNLPPAIFTSFCGGADIGQAIAKDTRISLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGLM+QQTV+QRFGKCLLELSGNNAIIIMDDADI+LAV SVLFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLMLQQTVNQRFGKCLLELSGNNAIIIMDDADIQLAVHSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HESIYQ VLDQL+DVYKQVKIG+PLEKG LLGPLHT ESRK+FE+GIE IKS
Sbjct: 301 TTCRRLLLHESIYQRVLDQLLDVYKQVKIGNPLEKGNLLGPLHTSESRKSFERGIEIIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKIL GGSVIESEGNFVQPTIVEISP AD+VKEELFAPVLYVMKFQT +EA++INNSV
Sbjct: 361 QGGKILIGGSVIESEGNFVQPTIVEISPNADVVKEELFAPVLYVMKFQTLQEAIEINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLG 441
PQGLSSSIFTR PE IFKW+G
Sbjct: 421 PQGLSSSIFTRKPEIIFKWIG 441
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447906|ref|XP_004141707.1| PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Cucumis sativus] gi|449480506|ref|XP_004155914.1| PREDICTED: aldehyde dehydrogenase family 7 member B4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/436 (84%), Positives = 405/436 (92%)
Query: 6 QEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKAC 65
+EY FLSEIGL GC+VNG WK +GP VSS NP NNQ IA VVEAS +DYEEGM+AC
Sbjct: 5 KEYGFLSEIGLGSRNLGCYVNGAWKGNGPVVSSSNPANNQVIAEVVEASTQDYEEGMQAC 64
Query: 66 SEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCD 125
SEA+KIWM++PAPKRG++VRQIGDALR KLH LGRL+S+EMGKILPEGIGEVQE+IDMCD
Sbjct: 65 SEAAKIWMQVPAPKRGDIVRQIGDALRAKLHQLGRLVSLEMGKILPEGIGEVQEIIDMCD 124
Query: 126 FAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCV 185
F+VGLSRQLNGS+IPSERPNHMM+E WNPLG+VGVITAFNFPCAVLGWNACIALVCGNCV
Sbjct: 125 FSVGLSRQLNGSIIPSERPNHMMMEMWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCV 184
Query: 186 VWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGS 245
VWKGAPTTPLITIA+TKLV+ V E+N LPGAIFTSFCGGAEIGQAIAKD RI LVSFTGS
Sbjct: 185 VWKGAPTTPLITIAMTKLVAGVLEKNNLPGAIFTSFCGGAEIGQAIAKDRRIPLVSFTGS 244
Query: 246 TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR 305
+KVGLMVQQTV++R+GKCLLELSGNNAI++MDDADI+LAVRSVLFAAVGTAGQRCTTCRR
Sbjct: 245 SKVGLMVQQTVNERYGKCLLELSGNNAIVVMDDADIQLAVRSVLFAAVGTAGQRCTTCRR 304
Query: 306 LLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365
LL+HES+YQ VLDQLVDVYKQVKIGDPLEKGTLLGPLHT +SRKNFEKGIE IKSQGGKI
Sbjct: 305 LLLHESVYQKVLDQLVDVYKQVKIGDPLEKGTLLGPLHTSDSRKNFEKGIEIIKSQGGKI 364
Query: 366 LTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
+ GGSVIESEGNFV+PTIVEISP A++VKEELFAPVLYVMKF+T +EA++INNSVPQGLS
Sbjct: 365 VIGGSVIESEGNFVEPTIVEISPNANVVKEELFAPVLYVMKFKTLKEAIEINNSVPQGLS 424
Query: 426 SSIFTRSPENIFKWLG 441
SSIFTR PE IFKW G
Sbjct: 425 SSIFTRRPEIIFKWTG 440
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|59860157|gb|AAX09646.1| aldehyde dehydrogenase family 7 member A1 [Euphorbia characias] | Back alignment and taxonomy information |
|---|
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/441 (83%), Positives = 402/441 (91%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FA++EYEFLSEIGLS GC+VNG WKA+GP V++ NP NNQ IA VVE S+EDYEE
Sbjct: 1 MGFARKEYEFLSEIGLSERNLGCYVNGTWKANGPVVTTSNPANNQAIAEVVEGSIEDYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
GMKACSEA+KIWM++PAPKRG++VRQIGDALR KL HLGRL+S+EMGKIL EGIGEVQE+
Sbjct: 61 GMKACSEAAKIWMQVPAPKRGDIVRQIGDALRGKLEHLGRLVSLEMGKILAEGIGEVQEI 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDF VGLSRQLNGS+IPSERPNH MLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFCVGLSRQLNGSIIPSERPNHAMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNC VWKGAPTTPL+TIA TKLV+EV ERN LP AIFTSFCGGA+IGQAIAKD RI LV
Sbjct: 181 CGNCAVWKGAPTTPLMTIATTKLVAEVLERNNLPLAIFTSFCGGADIGQAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGLMVQQTV+QR+GK LLELSGNNAII+MDDADI LA RS+LFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLMVQQTVNQRYGKSLLELSGNNAIIVMDDADIPLAARSILFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRL++HE IY TVLDQL+ YKQVKIGDPLEKGTLLGP+HT ESRKNFEKGIE IKS
Sbjct: 301 TTCRRLILHEKIYDTVLDQLLKSYKQVKIGDPLEKGTLLGPVHTAESRKNFEKGIELIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGGSVIESEGN+VQPTIVEIS A++VKEELFAPVLYVMKFQT EEA++INNSV
Sbjct: 361 QGGKILTGGSVIESEGNYVQPTIVEISSKAEVVKEELFAPVLYVMKFQTLEEAIEINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLG 441
PQGLSSSIFTR P+ IFKWLG
Sbjct: 421 PQGLSSSIFTRRPDVIFKWLG 441
|
Source: Euphorbia characias Species: Euphorbia characias Genus: Euphorbia Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224073640|ref|XP_002304124.1| predicted protein [Populus trichocarpa] gi|222841556|gb|EEE79103.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/449 (81%), Positives = 408/449 (90%), Gaps = 8/449 (1%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQ-KIATVVEASLEDYE 59
M FA++EYEFLSEIGLS GC+V+G WKA+GP V+S+NP NNQ IA VVE S+EDYE
Sbjct: 1 MGFARKEYEFLSEIGLSSRNLGCYVDGTWKANGPVVTSVNPANNQVAIAEVVEGSIEDYE 60
Query: 60 EGMKACSEASKIWME-------LPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE 112
EGM+ACSEA+KIWM+ +P+PKRGE+VRQIGDALR KL LGRL+S+EMGKILPE
Sbjct: 61 EGMRACSEAAKIWMQASLFFLAVPSPKRGEIVRQIGDALRTKLQQLGRLVSLEMGKILPE 120
Query: 113 GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172
GIGEVQE+IDMCDF+VGLSRQLNGSVIPSERPNH MLE WNPLG+VGVITAFNFPCAVLG
Sbjct: 121 GIGEVQEIIDMCDFSVGLSRQLNGSVIPSERPNHAMLEMWNPLGIVGVITAFNFPCAVLG 180
Query: 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIA 232
WNACIALVCGNCVVWKGAPTTPLITIA+T+LV+ V E+N LP AIFTSFCGGA+IGQA+A
Sbjct: 181 WNACIALVCGNCVVWKGAPTTPLITIAMTRLVAGVLEKNNLPPAIFTSFCGGADIGQAVA 240
Query: 233 KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAA 292
KD RI LVSFTGS+KVGLMVQQ V+QRFGKCLLELSGNNAII+MDDA+I+LAVRSV+FAA
Sbjct: 241 KDARIPLVSFTGSSKVGLMVQQIVNQRFGKCLLELSGNNAIIVMDDANIQLAVRSVMFAA 300
Query: 293 VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFE 352
VGTAGQRCTTCRRLL+HESIYQ VLDQL+DVYKQVKIGDPLEKGTLLGPLHT ESRK+FE
Sbjct: 301 VGTAGQRCTTCRRLLLHESIYQRVLDQLLDVYKQVKIGDPLEKGTLLGPLHTSESRKSFE 360
Query: 353 KGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEE 412
KGIE IKSQ KI+TGGSVIESEGNFVQPTIVEISP AD+VKEELFAPVLYVMKFQT +E
Sbjct: 361 KGIEIIKSQACKIITGGSVIESEGNFVQPTIVEISPNADVVKEELFAPVLYVMKFQTLQE 420
Query: 413 AVKINNSVPQGLSSSIFTRSPENIFKWLG 441
A++INNSVPQGLSSSIFTR P IFKW+G
Sbjct: 421 AIEINNSVPQGLSSSIFTRQPGVIFKWIG 449
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444704|ref|XP_002278093.1| PREDICTED: aldehyde dehydrogenase family 7 member A1 [Vitis vinifera] gi|297738549|emb|CBI27794.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/441 (80%), Positives = 404/441 (91%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M F ++EY+FL+EIG+ P PGC++NG+WKA GP VSS+NP NNQ+IA V EAS+EDYEE
Sbjct: 1 MSFERKEYQFLAEIGVGPANPGCYINGEWKARGPLVSSVNPSNNQRIAVVTEASIEDYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+ ACSEA+K WM++PAPKRGE+VRQIG+ALR KL LGRL+S+EMGKIL EGIGEVQE+
Sbjct: 61 GLMACSEAAKTWMKIPAPKRGEIVRQIGEALRAKLGSLGRLVSLEMGKILAEGIGEVQEI 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
+DMCD+AVGLSRQ+NGS+IPSERP+HMM E WNP+G+VGVITAFNFPCAVLGWNAC+ALV
Sbjct: 121 VDMCDYAVGLSRQINGSIIPSERPDHMMCEVWNPMGIVGVITAFNFPCAVLGWNACLALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPL+TIA+TKLV+EV E+N LPGAIFTSFCGGAEIG+AI+KD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLVTIAVTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAISKDARIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGLMVQQ V+QRFGKCLLELSGNNAIIIM+DADI LAVRSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLMVQQAVNQRFGKCLLELSGNNAIIIMEDADIGLAVRSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HESIY+TVL+QL+DVYKQVK+GDPLEK TL+GPLHT S++NFEKGIE IK
Sbjct: 301 TTCRRLLVHESIYETVLNQLIDVYKQVKMGDPLEKSTLVGPLHTRASKENFEKGIEIIKF 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGG IL GGS +ESEGNFVQPTIVEISP A +VKEELF PVLYVMKFQTFEEAV++NNSV
Sbjct: 361 QGGNILIGGSTVESEGNFVQPTIVEISPNASVVKEELFGPVLYVMKFQTFEEAVEMNNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLG 441
PQGLSSSIFTR PE IFKW+G
Sbjct: 421 PQGLSSSIFTRKPEVIFKWIG 441
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242049414|ref|XP_002462451.1| hypothetical protein SORBIDRAFT_02g025790 [Sorghum bicolor] gi|241925828|gb|EER98972.1| hypothetical protein SORBIDRAFT_02g025790 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/439 (80%), Positives = 398/439 (90%)
Query: 3 FAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGM 62
FAK+E++FL+E+GL+ PG FV G W GP V+S +P NNQ IA VVEAS++DYEEGM
Sbjct: 4 FAKEEHQFLAELGLAQRNPGAFVCGAWGGSGPAVTSTSPTNNQVIAEVVEASVQDYEEGM 63
Query: 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID 122
+AC +A+K WM PAPKRGE+VRQIGDALR KLHHLGRL+S+EMGKILPEGIGEVQE+ID
Sbjct: 64 RACFDAAKTWMAFPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIID 123
Query: 123 MCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182
MCD+AVGLSRQLNGS+IPSERPNHMM+E WNPLGVVGVITAFNFPCAVLGWNACIALVCG
Sbjct: 124 MCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCG 183
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
NCVVWKGAPTTPLITIA+TK+V+ V E+N LPGAIFTSFCGG EIGQAIA D RI LVSF
Sbjct: 184 NCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIAVDTRIPLVSF 243
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGST+ GLMVQQ V+ RFGKCLLELSGNNAII+MDDADI+LAVRSVLFAAVGTAGQRCTT
Sbjct: 244 TGSTRAGLMVQQQVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTT 303
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
CRRL++HESIYQT LDQLV+VYKQV+IGDPLEKGTLLGPLHTP S++NF KG++ IKSQG
Sbjct: 304 CRRLILHESIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGVQTIKSQG 363
Query: 363 GKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422
GKIL GGS IESEGNFVQPTIVEI+P+A +VKEELF PVLYVMKFQ+ +EA++INNSVPQ
Sbjct: 364 GKILFGGSAIESEGNFVQPTIVEITPSAAVVKEELFGPVLYVMKFQSLKEAIEINNSVPQ 423
Query: 423 GLSSSIFTRSPENIFKWLG 441
GLSSSIFT+ PE IFKWLG
Sbjct: 424 GLSSSIFTKRPEIIFKWLG 442
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224031057|gb|ACN34604.1| unknown [Zea mays] gi|414589591|tpg|DAA40162.1| TPA: aldehyde dehydrogenase family 7 member A1 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/439 (80%), Positives = 397/439 (90%)
Query: 3 FAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGM 62
FAK+E++FL+E+GL+ PG F G W GPTV+S +P NNQ IA VVEAS+ DYEEGM
Sbjct: 4 FAKEEHQFLAELGLAQRNPGAFACGAWGGSGPTVTSTSPTNNQVIAEVVEASVHDYEEGM 63
Query: 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID 122
+AC +A+K WM +PAPKRGE+VRQIGDALR KLHHLGRL+S+EMGKILPEGIGEVQE+ID
Sbjct: 64 RACFDAAKTWMAIPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIID 123
Query: 123 MCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182
MCD+AVGLSRQLNGS+IPSERPNHMM+E WNPLGVVGVITAFNFPCAVLGWNACIALVCG
Sbjct: 124 MCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCG 183
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
NCVVWKGAPTTPLITIA+TK+V+ V E+N LPGAIFTSFCGG EIGQAIA D RI LVSF
Sbjct: 184 NCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRIPLVSF 243
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGST+ GLMVQQ V RFGKCLLELSGNNAII+MDDADI+LAVRSVLFAAVGTAGQRCTT
Sbjct: 244 TGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTT 303
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
CRRL++HE+IYQT LDQLV+VYKQV+IGDPLEKGTLLGPLHTP S++NF KGI+ IKSQG
Sbjct: 304 CRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQG 363
Query: 363 GKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422
GKIL GGS IESEGNFVQPTIVEI+P+A +VKEELF PVLYVMKFQ+ +EA++INNSVPQ
Sbjct: 364 GKILFGGSAIESEGNFVQPTIVEITPSAPVVKEELFGPVLYVMKFQSLKEAIEINNSVPQ 423
Query: 423 GLSSSIFTRSPENIFKWLG 441
GLSSSIFT+ P+ IFKWLG
Sbjct: 424 GLSSSIFTKRPDIIFKWLG 442
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|226531366|ref|NP_001149126.1| aldehyde dehydrogenase family 7 member A1 [Zea mays] gi|195624928|gb|ACG34294.1| aldehyde dehydrogenase family 7 member A1 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/439 (80%), Positives = 396/439 (90%)
Query: 3 FAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGM 62
FAK+E++FL+E+GL+ PG F G W GPTV+S +P NNQ IA VVEAS+ DYEEGM
Sbjct: 4 FAKEEHQFLAELGLAQRNPGAFACGAWGGSGPTVTSTSPTNNQVIAEVVEASVHDYEEGM 63
Query: 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID 122
+AC +A+K WM +PAPKRGE+VRQIGDALR KLHHLGRL+S+EMGKILPEGIGEVQE+ID
Sbjct: 64 RACFDAAKTWMAIPAPKRGEIVRQIGDALRAKLHHLGRLVSLEMGKILPEGIGEVQEIID 123
Query: 123 MCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182
MCD+AVGLSRQLNGS+IPSERPNHMM+E WNPLGVVGVITAFNFPCAVLGWNACIALVCG
Sbjct: 124 MCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCG 183
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
NCVVWKGAPTTPLITIA+TK+V+ V E+N LPGAIFTSFCGG EIGQAIA D RI LVSF
Sbjct: 184 NCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRIPLVSF 243
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGST+ GLMVQQ V RFGKCLLELSGNNAII+MDDADI+LAVRSVLFAAVGTAGQRCTT
Sbjct: 244 TGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTT 303
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
CRRL++HE+IYQT LDQLV+VYKQV+IGDPLEKGTLLGPLHTP S++NF KGI+ IKSQG
Sbjct: 304 CRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQG 363
Query: 363 GKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422
GKIL GGS IESEGNFVQPTIVEI+P+A +VKEELF PVLY MKFQT +EA++INNSVPQ
Sbjct: 364 GKILFGGSAIESEGNFVQPTIVEITPSAPVVKEELFGPVLYAMKFQTLKEAIEINNSVPQ 423
Query: 423 GLSSSIFTRSPENIFKWLG 441
GLSSSIFT+ P+ IFKWLG
Sbjct: 424 GLSSSIFTKRPDIIFKWLG 442
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312283183|dbj|BAJ34457.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
|---|
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/441 (80%), Positives = 396/441 (89%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M A +EYEFLSEIGLS G +V GKW+ +GP VS++NP NNQ IA VVEASL+DYE+
Sbjct: 1 MGSANKEYEFLSEIGLSSHNLGSYVGGKWQGNGPVVSTLNPANNQPIAQVVEASLDDYEK 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+KAC EA+K WM++PAPKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEV
Sbjct: 61 GLKACEEAAKTWMQVPAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPLITIA+TKLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTAMCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGL VQQTV R GK LLELSGNNAII+M+DADI+LA RSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLKVQQTVSARSGKTLLELSGNNAIIVMEDADIQLAARSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HE +Y VL+QL+ YKQVKIGDPLEKGTLLGPLHTPES+KNFEKGIE IKS
Sbjct: 301 TTCRRLLLHERVYDKVLEQLLTSYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEVIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGG IE EGNFV+PTI+EIS A +VKEELFAPVLY +KF++FEEAV INNSV
Sbjct: 361 QGGKILTGGKAIEGEGNFVEPTIIEISSDASVVKEELFAPVLYALKFKSFEEAVAINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLG 441
PQGLSSSIFTR+PENIFKW+G
Sbjct: 421 PQGLSSSIFTRNPENIFKWIG 441
|
Source: Thellungiella halophila Species: Eutrema halophilum Genus: Eutrema Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357158604|ref|XP_003578181.1| PREDICTED: LOW QUALITY PROTEIN: aldehyde dehydrogenase family 7 member A1-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/439 (80%), Positives = 396/439 (90%)
Query: 3 FAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGM 62
FA +E++FL+E+GLSP PG F G W GP +++ NP NNQ IA VVEAS++DYE+GM
Sbjct: 4 FAHKEHQFLAELGLSPRNPGSFACGAWGGSGPVITTTNPTNNQVIAEVVEASVDDYEKGM 63
Query: 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVID 122
AC +A+K WM +PAPKRGE+VRQIGDALR KL HLGRLLS+EMGKILPEGIGEVQE+ID
Sbjct: 64 NACFDAAKTWMAIPAPKRGEIVRQIGDALRAKLDHLGRLLSLEMGKILPEGIGEVQEIID 123
Query: 123 MCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182
MCD+AVGLSRQLNGS+IPSERPNHMM+E WNPLGVVGVITAFNFPCAVLGWNACIALVCG
Sbjct: 124 MCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCG 183
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
NCVVWKGAPTTPLITIA+TK+V+ VFE+N LP AIFT+FCGGAEIGQAIA D RI LVSF
Sbjct: 184 NCVVWKGAPTTPLITIAMTKIVASVFEKNNLPSAIFTAFCGGAEIGQAIALDRRIPLVSF 243
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGS+KVG MVQQ V+ RFGKCLLELSGNNAIIIMDDADI LAVRSVLFAAVGTAGQRCTT
Sbjct: 244 TGSSKVGQMVQQQVNARFGKCLLELSGNNAIIIMDDADIPLAVRSVLFAAVGTAGQRCTT 303
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
CRRLL+HESIYQTVLDQLV+VYKQV+IGDPLEKGTLLGPLHT S+++F KGI+ IKSQG
Sbjct: 304 CRRLLLHESIYQTVLDQLVEVYKQVRIGDPLEKGTLLGPLHTTASKESFLKGIQIIKSQG 363
Query: 363 GKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422
GKIL GGS IESEGNFVQPTIVEISP+A +V+EELF PVLYVMKFQT +EA++INNSVPQ
Sbjct: 364 GKILLGGSAIESEGNFVQPTIVEISPSAPVVREELFGPVLYVMKFQTLKEAIEINNSVPQ 423
Query: 423 GLSSSIFTRSPENIFKWLG 441
GLSSSIFTR P+ IFKW+G
Sbjct: 424 GLSSSIFTRKPDAIFKWIG 442
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 441 | ||||||
| TAIR|locus:2014380 | 508 | ALDH7B4 "AT1G54100" [Arabidops | 1.0 | 0.868 | 0.761 | 3e-181 | |
| UNIPROTKB|Q41247 | 494 | BTG-26 "Aldehyde dehydrogenase | 1.0 | 0.892 | 0.763 | 4.3e-180 | |
| UNIPROTKB|Q9ZPB7 | 508 | Q9ZPB7 "Aldehyde dehydrogenase | 1.0 | 0.868 | 0.739 | 5.5e-180 | |
| UNIPROTKB|E1C4W4 | 536 | ALDH7A1 "Uncharacterized prote | 0.984 | 0.809 | 0.541 | 1.1e-126 | |
| DICTYBASE|DDB_G0276821 | 509 | DDB_G0276821 "aldehyde dehydro | 0.986 | 0.854 | 0.526 | 1.4e-126 | |
| UNIPROTKB|E2RQ99 | 539 | ALDH7A1 "Uncharacterized prote | 0.984 | 0.805 | 0.529 | 2.6e-125 | |
| UNIPROTKB|J9NVL7 | 522 | ALDH7A1 "Uncharacterized prote | 0.984 | 0.831 | 0.529 | 2.6e-125 | |
| ZFIN|ZDB-GENE-030131-6129 | 541 | aldh7a1 "aldehyde dehydrogenas | 0.984 | 0.802 | 0.522 | 4.3e-125 | |
| UNIPROTKB|E1BFG0 | 539 | ALDH7A1 "Alpha-aminoadipic sem | 0.984 | 0.805 | 0.525 | 1.3e-123 | |
| UNIPROTKB|Q2KJC9 | 539 | ALDH7A1 "Alpha-aminoadipic sem | 0.984 | 0.805 | 0.525 | 1.7e-123 |
| TAIR|locus:2014380 ALDH7B4 "AT1G54100" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1759 (624.3 bits), Expect = 3.0e-181, P = 3.0e-181
Identities = 336/441 (76%), Positives = 376/441 (85%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M A EYEFLSEIGL+ G +V GKW+A+GP VS++NP NNQ IA VVEASLEDYE+
Sbjct: 1 MGSANNEYEFLSEIGLTSHNLGSYVAGKWQANGPLVSTLNPANNQPIAQVVEASLEDYEQ 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+KAC EA+KIWM++ APKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEVQEV
Sbjct: 61 GLKACEEAAKIWMQVTAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKG KLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTAMCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRC 300
SFTGS++VG MVQQTV+ R GK LLELSGNN +LA RSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSRVGSMVQQTVNARSGKTLLELSGNNAIIVMDDADIQLAARSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HES+Y VL+QL+ YKQVKIG+PLEKGTLLGPLHTPES+KNFEKGIE IKS
Sbjct: 301 TTCRRLLLHESVYDKVLEQLLTSYKQVKIGNPLEKGTLLGPLHTPESKKNFEKGIEVIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGG +E EGNFV+PTI+EIS A +VKEELFAPVLYV+KF++F EAV INNSV
Sbjct: 361 QGGKILTGGKAVEGEGNFVEPTIIEISADAAVVKEELFAPVLYVLKFKSFGEAVAINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLG 441
PQGLSSSIFTR+PENIF+W+G
Sbjct: 421 PQGLSSSIFTRNPENIFRWIG 441
|
|
| UNIPROTKB|Q41247 BTG-26 "Aldehyde dehydrogenase family 7 member A1" [Brassica napus (taxid:3708)] | Back alignment and assigned GO terms |
|---|
Score = 1748 (620.4 bits), Expect = 4.3e-180, P = 4.3e-180
Identities = 339/444 (76%), Positives = 373/444 (84%)
Query: 1 MEFAKQEYEFLSEIGLSPE-TPGCFVNGKWKAHGPTVSSINPVNNQ--KIATVVEASLED 57
M A +EYEFLSEIGLS G +V GKW +GP VS++NP NNQ IA VVEASLED
Sbjct: 1 MGSASKEYEFLSEIGLSSSHNLGNYVGGKWLGNGPLVSTLNPANNQVLPIAQVVEASLED 60
Query: 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117
YE G+KAC EA+K WM++PAPKRG++VRQIGDALR KL +LGRLLS+EMGKIL EGIGEV
Sbjct: 61 YEIGLKACEEAAKTWMQVPAPKRGDIVRQIGDALRSKLDYLGRLLSLEMGKILAEGIGEV 120
Query: 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177
QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE WNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 121 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLEMWNPLGIVGVITAFNFPCAVLGWNACI 180
Query: 178 ALVCGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRI 237
ALVCGNCVVWKG KLV+EV E+N LPGAIFT+ CGGAEIG+AIAKD RI
Sbjct: 181 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNHLPGAIFTAMCGGAEIGEAIAKDTRI 240
Query: 238 SLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAG 297
LVSFTGS+KVGL VQQTV R GK LLELSGNN +LA RSVLFAAVGTAG
Sbjct: 241 PLVSFTGSSKVGLTVQQTVSARSGKTLLELSGNNAIIVMDDADIQLAARSVLFAAVGTAG 300
Query: 298 QRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357
QRCTTCRRLL+HES+Y VL+QL+ YKQVKIGDPLEKGTLLGPLHTPES+KNFEKGIE
Sbjct: 301 QRCTTCRRLLLHESVYDKVLEQLLTSYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEV 360
Query: 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN 417
IKSQGGK+LTGG +E EGNFV+PTI+EIS A +VKEELFAPVLY +KF+TFEEAV IN
Sbjct: 361 IKSQGGKVLTGGKAVEGEGNFVEPTIIEISSDAAVVKEELFAPVLYALKFKTFEEAVAIN 420
Query: 418 NSVPQGLSSSIFTRSPENIFKWLG 441
NSVPQGLSSSIFTRSP+NIFKW+G
Sbjct: 421 NSVPQGLSSSIFTRSPDNIFKWIG 444
|
|
| UNIPROTKB|Q9ZPB7 Q9ZPB7 "Aldehyde dehydrogenase family 7 member A1" [Malus x domestica (taxid:3750)] | Back alignment and assigned GO terms |
|---|
Score = 1747 (620.0 bits), Expect = 5.5e-180, P = 5.5e-180
Identities = 326/441 (73%), Positives = 372/441 (84%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FAK+E+EFLS IGL+PE PG F+NGKWKA GP +S+++P NNQ+IA V E S+E+YEE
Sbjct: 1 MGFAKKEHEFLSAIGLAPENPGGFINGKWKASGPVISTVSPSNNQEIAKVTEVSMEEYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G+++C++A+K W LPAPKRGE+VRQIGDALREKL HLG+L+S+EMGKIL EGIGEVQEV
Sbjct: 61 GLRSCNDAAKTWKSLPAPKRGEIVRQIGDALREKLQHLGKLVSLEMGKILAEGIGEVQEV 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
I MCDFAVGLSRQLNGS+IPSERP+HMM E WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IYMCDFAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKG KL++EV E+N LP AIFT+FCGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLVTIAVTKLIAEVLEKNNLPAAIFTAFCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVG VQQ V +RFGKCLLELSGNN LAVRS+ FAAVGTAGQRC
Sbjct: 241 SFTGSSKVGAKVQQIVTERFGKCLLELSGNNALIVMDDADVGLAVRSIFFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRL +HESIYQ VLD+LV +Y QVKIGDPLE+GTL+GP+HT SR+NFEKGI IKS
Sbjct: 301 TTCRRLYLHESIYQNVLDKLVGLYNQVKIGDPLEEGTLVGPVHTKASRENFEKGISTIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGGSVIES+GNFVQPTIVEI+ A +VKEELF PVLYVMKF+T EEA+ +NNSV
Sbjct: 361 QGGKILTGGSVIESDGNFVQPTIVEIASNASVVKEELFGPVLYVMKFKTLEEAIALNNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLG 441
PQGLSSSIFT P IFKW+G
Sbjct: 421 PQGLSSSIFTSKPNTIFKWIG 441
|
|
| UNIPROTKB|E1C4W4 ALDH7A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1244 (443.0 bits), Expect = 1.1e-126, P = 1.1e-126
Identities = 236/436 (54%), Positives = 305/436 (69%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL + PG + NG+W G V++ P NN+ IA V +ASLEDYEE +K
Sbjct: 35 QYAWLRELGLQEDNPGVY-NGRWGGGGQVVTTYCPANNEPIARVRQASLEDYEETVKKAK 93
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA ++W ++PAPKRGEVVRQIGDALR+K+ LG L+S+EMGKI EG+GEVQE +D+CD+
Sbjct: 94 EAWQVWADIPAPKRGEVVRQIGDALRQKIKVLGSLVSLEMGKIYVEGVGEVQEYVDVCDY 153
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G V+PSER H ++E WNP+G+VG+ITAFNFP AV GWN+ IA++CGN +
Sbjct: 154 AVGLSRMIGGPVLPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNSAIAMICGNACL 213
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K+V++V E NK+PGA+ + CGGA+IG A+A+D R+ L+SFTGST
Sbjct: 214 WKGAPTTSLTSVAVTKIVAKVLEDNKIPGAVCSLVCGGADIGTAMARDERMDLLSFTGST 273
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L + S LFAAVGTAGQRCTT RRL
Sbjct: 274 EVGKQVALMVQERFGRSLLELGGNNAIIVFEDADLNLVIPSTLFAAVGTAGQRCTTARRL 333
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HE+I+ V+++LV Y QV+IGDP + TL GPLHT + K F +E K QGG ++
Sbjct: 334 FLHENIHDEVVEKLVKAYAQVRIGDPWDSDTLYGPLHTKAAVKMFLDAVEQAKQQGGSVV 393
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG VI GN+V+PTIV ++ A IV E FAP+LYV+KF+ EE NN V QGLS
Sbjct: 394 YGGKVINRPGNYVEPTIVTGLAHNAPIVHTETFAPILYVLKFKEEEEVFAWNNEVKQGLS 453
Query: 426 SSIFTRSPENIFKWLG 441
SSIFTR IF+WLG
Sbjct: 454 SSIFTRDLGRIFRWLG 469
|
|
| DICTYBASE|DDB_G0276821 DDB_G0276821 "aldehyde dehydrogenase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 230/437 (52%), Positives = 304/437 (69%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
EY FL+E+G+ E NGKW G + +NP NN+ IATV A+ E+YE ++A
Sbjct: 6 EYPFLAELGIKAENNDGVFNGKWGGAGEIIKCLNPTNNKVIATVRGAAPEEYETCIQAML 65
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
A W PAP+RGE+VR IG A+REK+ L +L+S+EMGKI E GEVQE ID+CD+
Sbjct: 66 AAKVKWALTPAPRRGEIVRLIGQAMREKIEPLSKLISLEMGKIYIEAKGEVQEFIDVCDY 125
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GLSR +NG V+PSERPNH+++ETWNPLG+VG+ITAFNFPCAVLGWNA I+++CGN +
Sbjct: 126 ATGLSRSINGQVMPSERPNHILMETWNPLGLVGIITAFNFPCAVLGWNAAISMICGNVQL 185
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245
WKG K++ +V N + A+ G G +G+ + +D R L+SFTGS
Sbjct: 186 WKGASTTSLITLAVSKIIEKVLVENDVDPAVCCVLIGPGRTVGEQMIQDKRFGLISFTGS 245
Query: 246 TKVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRR 305
T+VG + TVH FGK +LEL GNN +L +R+VLFA+VGT GQRCTTCRR
Sbjct: 246 TEVGRRISSTVHGYFGKTILELGGNNAIVVAEDADIELVLRAVLFASVGTTGQRCTTCRR 305
Query: 306 LLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365
L +HES+Y T+L++L YK +KIG+PLE+G L+GPLHT + K F +G+E IK QGGK+
Sbjct: 306 LFVHESLYDTILERLTKAYKTIKIGNPLEEGVLVGPLHTQSAVKEFTEGLEEIKKQGGKV 365
Query: 366 LTGGSVIE-SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL 424
+ GG+ ++ S GNFV+PT+V I A IVK ELF P+LY+MKF+ ++A NN VPQGL
Sbjct: 366 VIGGNKLDISGGNFVEPTVVAIEHDAPIVKTELFVPILYIMKFKNLDDAFAWNNEVPQGL 425
Query: 425 SSSIFTRSPENIFKWLG 441
SSS+FT + +NIFKWLG
Sbjct: 426 SSSLFTNNQKNIFKWLG 442
|
|
| UNIPROTKB|E2RQ99 ALDH7A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 231/436 (52%), Positives = 304/436 (69%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE +K
Sbjct: 38 QYAWLKELGLREENEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA K+W E+PAPKRGEVVRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWKVWAEVPAPKRGEVVRQIGDALREKIQILGNLVSLEMGKILVEGVGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCL 216
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K++++V E NKLPGAI + CGGA+IG A+AKD R++L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L V SVLFAAVGTAGQRCTT RRL
Sbjct: 277 QVGRQVALMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSVLFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+++L Y+Q+++G+P + L GPLHT ++ F +E+ K +GG ++
Sbjct: 337 FLHESIHDEVVNRLKKAYEQIRVGNPWDSDVLYGPLHTKQAVSMFLAAVEDAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PT+V ++ A I E FAP+LYV KF+ EE NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTVVTGLAHNASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLG 441
SSIFT+ IF+WLG
Sbjct: 457 SSIFTKDLGRIFRWLG 472
|
|
| UNIPROTKB|J9NVL7 ALDH7A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1231 (438.4 bits), Expect = 2.6e-125, P = 2.6e-125
Identities = 231/436 (52%), Positives = 304/436 (69%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE +K
Sbjct: 38 QYAWLKELGLREENEGVY-NGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA K+W E+PAPKRGEVVRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWKVWAEVPAPKRGEVVRQIGDALREKIQILGNLVSLEMGKILVEGVGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCL 216
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K++++V E NKLPGAI + CGGA+IG A+AKD R++L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L V SVLFAAVGTAGQRCTT RRL
Sbjct: 277 QVGRQVALMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSVLFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+++L Y+Q+++G+P + L GPLHT ++ F +E+ K +GG ++
Sbjct: 337 FLHESIHDEVVNRLKKAYEQIRVGNPWDSDVLYGPLHTKQAVSMFLAAVEDAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PT+V ++ A I E FAP+LYV KF+ EE NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTVVTGLAHNASIAHTETFAPILYVFKFKNEEEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLG 441
SSIFT+ IF+WLG
Sbjct: 457 SSIFTKDLGRIFRWLG 472
|
|
| ZFIN|ZDB-GENE-030131-6129 aldh7a1 "aldehyde dehydrogenase 7 family, member A1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 228/436 (52%), Positives = 304/436 (69%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
EY +L E+GL + G + NG W G V+S P NN+ IA V +A++ +YEE ++
Sbjct: 40 EYNWLKELGLKEDNDGVY-NGSWGGQGEVVTSYCPANNEPIARVRQATIAEYEETIQKAL 98
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
+A K+W ++PAPKRGE+VRQIG+ALR K+ LG L+S+EMGKI EG+GEVQE +D+CD+
Sbjct: 99 DAWKVWADVPAPKRGEIVRQIGEALRRKIKALGSLVSLEMGKIYVEGVGEVQEYVDVCDY 158
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H+++E WNP+G+VG+ITAFNFP AV GWN IAL+CGN +
Sbjct: 159 AVGLSRMIGGPILPSERPGHVLIEQWNPVGLVGIITAFNFPVAVYGWNNAIALICGNACL 218
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K+V+EV E+N LPGAI + CGGA+IG A+AKD R+ L+SFTGST
Sbjct: 219 WKGAPTTPLTSVAVTKIVAEVLEQNHLPGAICSMTCGGADIGMAMAKDERVGLLSFTGST 278
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
VG V V +RFG+ LLEL GNN L V S +FA+VGTAGQRCTT RRL
Sbjct: 279 HVGKQVAMMVQERFGRQLLELGGNNAIIVFEDADLSLVVPSAVFASVGTAGQRCTTTRRL 338
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
++HESI+ V++++ YKQ++IGDP + TL GPLHT ++ + + IE K QGG ++
Sbjct: 339 MLHESIHDEVVERIAKAYKQIRIGDPWDPNTLYGPLHTKQAVQQYLAAIEQAKQQGGTLV 398
Query: 367 TGGSVIESEGNFVQPTIVEISP-TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG +++ GN+V+PTI+ P A IV E F P+LYV+KF+T EEA NN V QGLS
Sbjct: 399 CGGKIMDRPGNYVEPTIITGLPHNASIVHTETFVPILYVLKFKTEEEAFSWNNEVKQGLS 458
Query: 426 SSIFTRSPENIFKWLG 441
SSIFT+ +F+WLG
Sbjct: 459 SSIFTKDMGRVFRWLG 474
|
|
| UNIPROTKB|E1BFG0 ALDH7A1 "Alpha-aminoadipic semialdehyde dehydrogenase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1215 (432.8 bits), Expect = 1.3e-123, P = 1.3e-123
Identities = 229/436 (52%), Positives = 299/436 (68%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE ++
Sbjct: 38 QYAWLKELGLREENDGVY-NGSWGGRGEVITTYCPANNEPIARVRQASMADYEETVEKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA IW ++PAPKRGEVVRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWSIWADIPAPKRGEVVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNACL 216
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K++++V E NKLPGAI + CGGA+IG A+AKD R+ L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVDLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L V S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVALMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 337 FLHESIHDEVVNRLKKAYAQIRVGNPWDSNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A IV E FAP+LYV KF+ +E NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTIVTGLDHDASIVHTETFAPILYVFKFKNEDEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLG 441
SSIFT+ IF+WLG
Sbjct: 457 SSIFTKDMGRIFRWLG 472
|
|
| UNIPROTKB|Q2KJC9 ALDH7A1 "Alpha-aminoadipic semialdehyde dehydrogenase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 229/436 (52%), Positives = 299/436 (68%)
Query: 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
+Y +L E+GL E G + NG W G +++ P NN+ IA V +AS+ DYEE ++
Sbjct: 38 QYAWLKELGLREENDGVY-NGSWGGRGEVITTYCPANNEPIARVRQASMADYEETVEKAR 96
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
EA IW ++PAPKRGEVVRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE +D+CD+
Sbjct: 97 EAWSIWADVPAPKRGEVVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDVCDY 156
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
AVGLSR + G ++PSERP H ++E WNP+G+VG+ITAFNFP AV GWN IA++CGN +
Sbjct: 157 AVGLSRMIGGPILPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNACL 216
Query: 187 WKGXXXXXXXXXXXXKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
WKG K++++V E NKLPGAI + CGGA+IG A+AKD R+ L+SFTGST
Sbjct: 217 WKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVDLLSFTGST 276
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNXXXXXXXXXXKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG V V +RFG+ LLEL GNN L V S LFAAVGTAGQRCTT RRL
Sbjct: 277 QVGKQVALMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRL 336
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
+HESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K +GG ++
Sbjct: 337 FLHESIHDEVVNRLKKAYAQIRVGNPWDSNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVV 396
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG V++ GN+V+PTIV + A IV E FAP+LYV KF+ +E NN V QGLS
Sbjct: 397 YGGKVMDRPGNYVEPTIVTGLDHDASIVHTETFAPILYVFKFKNEDEVFAWNNEVKQGLS 456
Query: 426 SSIFTRSPENIFKWLG 441
SSIFT+ IF+WLG
Sbjct: 457 SSIFTKDMGRIFRWLG 472
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| B7GYG4 | BETB_ACIB3 | 1, ., 2, ., 1, ., 8 | 0.3078 | 0.9160 | 0.8244 | yes | no |
| A6UVT6 | LADH_META3 | 1, ., 2, ., 1, ., 2, 2 | 0.3243 | 0.9092 | 0.8623 | yes | no |
| B7I896 | BETB_ACIB5 | 1, ., 2, ., 1, ., 8 | 0.3078 | 0.9160 | 0.8244 | yes | no |
| B0V944 | BETB_ACIBY | 1, ., 2, ., 1, ., 8 | 0.3078 | 0.9160 | 0.8244 | yes | no |
| B2HV80 | BETB_ACIBC | 1, ., 2, ., 1, ., 8 | 0.3102 | 0.9160 | 0.8244 | yes | no |
| P42236 | ALDH1_BACSU | 1, ., 2, ., 1, ., 3 | 0.3474 | 0.9297 | 0.8401 | yes | no |
| P83401 | AL7A1_DICDI | 1, ., 2, ., 1, ., 3 | 0.5547 | 0.9886 | 0.8565 | yes | no |
| P46562 | AL7A1_CAEEL | 1, ., 2, ., 1, ., 3 | 0.5410 | 0.9841 | 0.8173 | yes | no |
| Q9K9B2 | ROCA1_BACHD | 1, ., 5, ., 1, ., 1, 2 | 0.3020 | 0.9478 | 0.8116 | yes | no |
| Q9SYG7 | AL7B4_ARATH | 1, ., 2, ., 1, ., 3 | 0.8072 | 1.0 | 0.8681 | yes | no |
| Q9DBF1 | AL7A1_MOUSE | 1, ., 2, ., 1, ., 8 | 0.5550 | 0.9841 | 0.8051 | yes | no |
| Q64057 | AL7A1_RAT | 1, ., 2, ., 1, ., 8 | 0.5504 | 0.9841 | 0.8051 | yes | no |
| Q2KJC9 | AL7A1_BOVIN | 1, ., 2, ., 1, ., 8 | 0.5573 | 0.9841 | 0.8051 | yes | no |
| P25795 | AL7A1_PEA | 1, ., 2, ., 1, ., 3 | 0.7592 | 0.9795 | 0.8503 | N/A | no |
| P49419 | AL7A1_HUMAN | 1, ., 2, ., 1, ., 8 | 0.5596 | 0.9841 | 0.8051 | yes | no |
| Q9ZPB7 | AL7A1_MALDO | 1, ., 2, ., 1, ., 3 | 0.7777 | 1.0 | 0.8681 | N/A | no |
| Q41247 | AL7A1_BRANA | 1, ., 2, ., 1, ., 3 | 0.8085 | 1.0 | 0.8927 | N/A | no |
| A3M365 | BETB_ACIBT | 1, ., 2, ., 1, ., 8 | 0.3102 | 0.9160 | 0.8244 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_1580042 | aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (509 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| eugene3.00140876 | acetate-CoA ligase (EC-6.2.1.1) (684 aa) | • | • | 0.918 | |||||||
| estExt_fgenesh4_pg.C_LG_VII0287 | beta-ureidopropionase (EC-3.5.1.6) (418 aa) | • | • | 0.900 | |||||||
| gw1.XIV.108.1 | annotation not avaliable (356 aa) | • | 0.899 | ||||||||
| gw1.XI.942.1 | alcohol dehydrogenase (EC-1.1.1.1) (377 aa) | • | 0.899 | ||||||||
| gw1.XI.3391.1 | pyruvate decarboxylase (EC-4.1.1.1) (574 aa) | • | 0.899 | ||||||||
| gw1.X.6258.1 | hypothetical protein (497 aa) | • | 0.899 | ||||||||
| gw1.VII.1374.1 | annotation not avaliable (139 aa) | • | 0.899 | ||||||||
| NIT2 | nitrilase 2 (EC-3.5.5.1) (266 aa) | • | 0.899 | ||||||||
| gw1.V.4399.1 | hypothetical protein (495 aa) | • | • | 0.899 | |||||||
| gw1.IX.2840.1 | SubName- Full=Putative uncharacterized protein; (496 aa) | • | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 441 | |||
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 0.0 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 0.0 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-150 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-136 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-135 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-121 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-117 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-108 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-105 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-102 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-98 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 5e-94 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 3e-91 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 9e-91 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 2e-87 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 8e-87 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 4e-86 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 6e-86 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 8e-86 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 2e-85 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 2e-84 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-83 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 6e-83 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 8e-82 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 5e-81 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 3e-80 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 3e-80 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 2e-79 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 2e-78 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 4e-78 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 5e-78 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-77 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 2e-77 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 2e-77 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 2e-77 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 2e-76 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 2e-76 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 3e-76 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 5e-76 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 1e-75 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 7e-75 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 7e-74 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 3e-73 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-72 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 3e-72 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 5e-72 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 6e-72 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 8e-72 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-71 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 3e-71 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 4e-71 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 8e-71 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-70 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 3e-70 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 3e-70 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 2e-69 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 3e-69 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 2e-68 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 5e-68 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 7e-68 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 9e-68 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 4e-66 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-65 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-65 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 1e-62 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 3e-61 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 4e-59 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-58 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-58 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 2e-58 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-57 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-57 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 1e-57 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 5e-57 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-56 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 2e-56 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 2e-54 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-54 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 4e-54 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 4e-54 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 4e-54 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 2e-53 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-52 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 2e-49 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 3e-49 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 1e-46 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 1e-46 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 6e-46 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 1e-43 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 3e-42 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 1e-41 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-39 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 1e-38 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 7e-38 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 1e-36 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 2e-36 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-32 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 6e-30 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 1e-27 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 4e-25 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 3e-24 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-23 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 2e-23 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 1e-21 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 5e-21 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 7e-20 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-16 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 8e-16 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 9e-16 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 2e-13 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 3e-13 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 5e-13 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 3e-08 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 5e-07 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 2e-06 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 2e-04 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 0.002 | |
| cd07079 | 406 | cd07079, ALDH_F18-19_ProA-GPR, Gamma-glutamyl phos | 0.004 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 884 bits (2287), Expect = 0.0
Identities = 374/441 (84%), Positives = 412/441 (93%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
M FA++EYEFLSEIGLS GC+V G+W+A+GP VSS+NP NNQ IA VVEASLEDYEE
Sbjct: 1 MGFARKEYEFLSEIGLSSRNLGCYVGGEWRANGPLVSSVNPANNQPIAEVVEASLEDYEE 60
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
G++AC EA+KIWM++PAPKRGE+VRQIGDALR KL +LGRL+S+EMGKIL EGIGEVQE+
Sbjct: 61 GLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEI 120
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
IDMCDFAVGLSRQLNGS+IPSERPNHMM+E WNPLG+VGVITAFNFPCAVLGWNACIALV
Sbjct: 121 IDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALV 180
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGNCVVWKGAPTTPLITIA+TKLV+EV E+N LPGAIFTSFCGGAEIG+AIAKD RI LV
Sbjct: 181 CGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLV 240
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGS+KVGLMVQQTV+ RFGKCLLELSGNNAII+MDDADI+LAVRSVLFAAVGTAGQRC
Sbjct: 241 SFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRC 300
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TTCRRLL+HESIY VL+QL+ VYKQVKIGDPLEKGTLLGPLHTPES+KNFEKGIE IKS
Sbjct: 301 TTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKS 360
Query: 361 QGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
QGGKILTGGS IESEGNFVQPTIVEISP AD+VKEELF PVLYVMKF+T EEA++INNSV
Sbjct: 361 QGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSV 420
Query: 421 PQGLSSSIFTRSPENIFKWLG 441
PQGLSSSIFTR+PE IFKW+G
Sbjct: 421 PQGLSSSIFTRNPETIFKWIG 441
|
Length = 508 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 762 bits (1971), Expect = 0.0
Identities = 275/419 (65%), Positives = 327/419 (78%)
Query: 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+G+W G V+SI+P N + IA V +A+ EDYE +KA EA K W ++PAPKRGE
Sbjct: 1 GVYDGEWGGGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGE 60
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
+VRQIGDALR+K LG+L+S+EMGKILPEG+GEVQE+ID+CDFAVGLSRQL G IPSE
Sbjct: 61 IVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSE 120
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
RP H M+E WNPLGVVGVITAFNFP AV GWNA IALVCGN VVWK +PTTPL IA+TK
Sbjct: 121 RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTK 180
Query: 203 LVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
+V+ V E+N LPGAI + CGGA++G+A+ KDPR+ LVSFTGST VG V Q V RFG+
Sbjct: 181 IVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGR 240
Query: 263 CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LLEL GNNAII+M+DAD+ LAVR+VLFAAVGTAGQRCTT RRL++HESIY VL++L
Sbjct: 241 SLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKK 300
Query: 323 VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382
YKQV+IGDPL+ GTL+GPLHT + N+ IE KSQGG +L GG VI+ GN+V+PT
Sbjct: 301 AYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPT 360
Query: 383 IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG 441
IVE A IVKEE FAP+LYV+KF T EEA+ NN VPQGLSSSIFT N F+WLG
Sbjct: 361 IVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLG 419
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 708 bits (1830), Expect = 0.0
Identities = 256/423 (60%), Positives = 317/423 (74%), Gaps = 4/423 (0%)
Query: 23 CFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+ G+W + G T +S NP N + IA V AS ED E + A EA K W ++PAP+RG
Sbjct: 1 GVIGGEWVGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRG 60
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
E+VRQIG+ALR+K LGRL+S+EMGKILPEG+GEVQE+ID+CD+AVGLSR L G IPS
Sbjct: 61 EIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPS 120
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
ERP H ++E WNPLGVVGVITAFNFP AV GWNA IALVCGN VVWK + TTPL IA+T
Sbjct: 121 ERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVT 180
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
K+++EV E+N LP + GG + G+ + DPR+ LVSFTGST+VG V +TV +RFG
Sbjct: 181 KILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFG 240
Query: 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
+ LLEL GNNAII+MDDAD+ LAVR+VLFAAVGTAGQRCTT RRL++HES+Y L++LV
Sbjct: 241 RVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLV 300
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFV 379
YKQV+IGDPL++GTL+GPL + + + IE KSQGG +LTGG I+ GN+V
Sbjct: 301 KAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYV 360
Query: 380 QPTIVEI-SPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+PTIV + A IV+EE FAP+LYV+KF + EEA+ INN VPQGLSSSIFT F+
Sbjct: 361 EPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFR 420
Query: 439 WLG 441
WLG
Sbjct: 421 WLG 423
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 435 bits (1121), Expect = e-150
Identities = 153/412 (37%), Positives = 226/412 (54%), Gaps = 7/412 (1%)
Query: 30 KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGD 89
+ T+ INP + IATV A+ ED + + A A K W + P +R ++ + D
Sbjct: 3 DSSSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLKAAD 62
Query: 90 ALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMML 149
L E+ L L ++E GK L E GEV ID + GL+R+L G +PS P +
Sbjct: 63 LLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLPS-DPGVLAY 121
Query: 150 ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFE 209
PLGVVG IT +NFP + W AL GN VV K + TPL + + +L E
Sbjct: 122 TRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEA-- 179
Query: 210 RNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
LP + G G+E+G A+ + P + VSFTGST+VG + + + + LEL
Sbjct: 180 --GLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLELG 237
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
G N +I+ DDAD+ AV +F A G AGQ CT RLL+HESIY +++LV+ K +K
Sbjct: 238 GKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLK 297
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-IS 387
+GDPL+ T +GPL + + R+ IE+ K +G K+L GG +G FV+PT++ ++
Sbjct: 298 VGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADVT 357
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW 439
P I +EE+F PVL V+ F+ +EA+++ N GL++ +FT E +
Sbjct: 358 PDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRV 409
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 399 bits (1027), Expect = e-136
Identities = 154/419 (36%), Positives = 227/419 (54%), Gaps = 9/419 (2%)
Query: 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++G+W T+ INP + IATV A+ ED + + A A + W L A +R
Sbjct: 2 KLLIDGEWVDGASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERA 61
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++R+I D L + L L+++E GK + E GE+ D + +R+L G IP
Sbjct: 62 AILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIP- 120
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
L PLGVVG IT +NFP A+ W AL GN VV K + TPL +A+
Sbjct: 121 TDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALA 180
Query: 202 KLVSEVFERNKLP-GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L +E LP G + GGAE+G A+ P + +SFTGST VG +
Sbjct: 181 ELAAEAG----LPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANL 236
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
LEL G + I+++DAD+ AV + +F A AGQRCT RL++HES+Y +++L
Sbjct: 237 KPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERL 296
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQ 380
V +K+GDPL+ T LGPL + E E IE+ ++G ++L GG G FV+
Sbjct: 297 VARAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP--GGYFVE 354
Query: 381 PTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
PTI+E ++P I +EE+F PVL V++F+ EEA+++ N GL+++IFTR F+
Sbjct: 355 PTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFR 413
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 395 bits (1018), Expect = e-135
Identities = 144/378 (38%), Positives = 213/378 (56%), Gaps = 7/378 (1%)
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
A K W LP +R ++R++ D L E+ L L ++E GK + E +GEV D +
Sbjct: 9 AAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRY 68
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
GL+R+L+G VIPS P + + PLGVVG IT +NFP + W AL GN VV
Sbjct: 69 YAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVV 128
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245
K + TPL + + +L++E LP + G G E+G A+A PR+ +SFTGS
Sbjct: 129 LKPSELTPLTALLLAELLAEAG----LPPGVLNVVTGDGDEVGAALASHPRVDKISFTGS 184
Query: 246 TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR 305
T VG + + + + LEL G + +I+ DDAD+ AV+ +F A G AGQ CT R
Sbjct: 185 TAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASR 244
Query: 306 LLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI 365
LL+HESIY +++LV+ K +K+G+PL+ T +GPL + IE+ K++G K+
Sbjct: 245 LLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKL 304
Query: 366 LTGGSVIESE-GNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
L GG +E G FV PT++ + P I +EE+F PVL V+ F+ EEA+++ N G
Sbjct: 305 LCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYG 364
Query: 424 LSSSIFTRSPENIFKWLG 441
L++ +FTR E +
Sbjct: 365 LAAGVFTRDLERALRVAE 382
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 360 bits (925), Expect = e-121
Identities = 159/423 (37%), Positives = 243/423 (57%), Gaps = 11/423 (2%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQK-IATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
++ G+W A G T S NP + ++ + T ++ D + ++A EA W ++PAP+R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
E + + + L+++ L RL++ EMGK L EG G+VQE IDM +A G R+L G +P
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVP 121
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
SE PN + P+GVV +IT +NFP A+ W ALVCGN VV+K A TP
Sbjct: 122 SELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA--- 178
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
KLV E PG + G E+G+A+ + P + +VSFTGST+VG + +T +
Sbjct: 179 LKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN 238
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
+ LE+ G N II+MDDAD+ LA+ L++A GT GQRCT RL++HES+Y L +
Sbjct: 239 KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRF 298
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEG 376
V+ K++++GD L++ T +GPL + E K +G +L GG + +G
Sbjct: 299 VERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKG 358
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
FV+PT+ ++P I +EE+F PV+ +++ + EEA++I N GLSS+I+T
Sbjct: 359 YFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNK 418
Query: 436 IFK 438
F+
Sbjct: 419 AFR 421
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 349 bits (898), Expect = e-117
Identities = 142/414 (34%), Positives = 223/414 (53%), Gaps = 9/414 (2%)
Query: 24 FVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+++G+W A G + NP + + + AS ED + + A + A W R +
Sbjct: 4 YIDGEWVAGGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARAD 63
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
++ + GD L + L RLL+ E GK LPE GEV + + G + +L+G +PS
Sbjct: 64 ILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPST 123
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
RP + T PLGVVG+IT +NFP A+ W AL GN VV+K A TP A+
Sbjct: 124 RPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALV- 182
Query: 203 LVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
E+ E LP +F G G+E+GQA+ + P + VSFTGST VG + R
Sbjct: 183 ---EILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGA 239
Query: 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
+ LE+ G N ++++DDAD+ LAV + A + GQRCT RL++ E I+ ++ LV
Sbjct: 240 RVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALV 299
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES--EGNFV 379
+ K +K+GD L++G +GP+ + + + IE +S+G K++ GG ++ EG ++
Sbjct: 300 ERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYL 359
Query: 380 QPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
P + ++ I +EE+F PV V++ + ++EA+ I N GLS+ I T S
Sbjct: 360 APALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTS 413
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 326 bits (838), Expect = e-108
Identities = 142/420 (33%), Positives = 227/420 (54%), Gaps = 9/420 (2%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG++ + G T+ +NP + +ATV A+ ED + + A A K W LPA +R
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA 60
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
+R++ D +RE L +L+ E GK L EV+ D D+ +R++ G +IPS
Sbjct: 61 AYLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPS 120
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
+RPN + P+GVV I +NFP ++ ALV GN +V K + TPL +
Sbjct: 121 DRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFA 180
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+LV E LP + G G+ +G A+ P++ ++S TGST+ G + + +
Sbjct: 181 ELVDEA----GLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENI 236
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL G I+M DAD+ LAV++++ + + GQ CT R+ +HE IY +++L
Sbjct: 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKL 296
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-GNFV 379
V+ K VK+GDP + T +GPL + E+ +E G +LTGG E E G F
Sbjct: 297 VEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFY 356
Query: 380 QPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+PT++ + +IV+EE+F PVL V+KF + +EA+++ N GL+S I+T + +
Sbjct: 357 EPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMR 416
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 321 bits (824), Expect = e-105
Identities = 143/430 (33%), Positives = 227/430 (52%), Gaps = 29/430 (6%)
Query: 24 FVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+ GK + S NP + ++ + TV +A+ E+ E ++A A W P +R
Sbjct: 36 VIGGKEVRTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERAR 95
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
++ + LR + L + +E+GK E +V E ID ++ +L G +
Sbjct: 96 LLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEMV 155
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
+ PLGV VI+ +NFP A+L ALV GN VV K A TP+I K
Sbjct: 156 PGEDNRY-VYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIA---AK 211
Query: 203 LVSEVFERNKLP-GAIFTSFCGG--AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
LV E+ E LP G + +F G E+G + + P + ++FTGS +VGL +++R
Sbjct: 212 LV-EILEEAGLPPGVV--NFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGL----RIYER 264
Query: 260 FGK----------CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
K + E+ G NAII+ +DAD+ A ++ +A G GQ+C+ C R+++H
Sbjct: 265 AAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVH 324
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
ES+Y L++LV+ K +K+GDP + +GP+ +R + IE K G++L GG
Sbjct: 325 ESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGK-SEGRLLLGG 383
Query: 370 SVIE--SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
V+E +EG FVQPTI + P + +EE+F PVL V+K + F+EA++I N GL+
Sbjct: 384 EVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTG 443
Query: 427 SIFTRSPENI 436
+F+RSPE++
Sbjct: 444 GVFSRSPEHL 453
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 312 bits (802), Expect = e-102
Identities = 143/406 (35%), Positives = 217/406 (53%), Gaps = 14/406 (3%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
INP + I V +A D + + A + A K W + A +R ++R+ D +RE+ L
Sbjct: 2 INPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDL 61
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVV 158
RLL++E GK L E GEV ++ +R++ G IPS P +L P+GVV
Sbjct: 62 ARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVV 121
Query: 159 GVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP-GAI 217
IT +NFP A++ AL G VV K A TPL +A+ +L E LP G +
Sbjct: 122 AAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAEL----AEEAGLPAGVL 177
Query: 218 FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG--LMVQ--QTVHQRFGKCLLELSGNNAI 273
AEIG+A+ PR+ +SFTGST VG LM Q TV + LEL GN
Sbjct: 178 NVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVK----RVSLELGGNAPF 233
Query: 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333
I+ DDAD+ AV + + AGQ C R+ +HESIY +++LV+ K++K+G+ L
Sbjct: 234 IVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGL 293
Query: 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADI 392
++GT +GPL + + E +E+ ++G K+LTGG + G F +PT++ +++ I
Sbjct: 294 DEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLI 353
Query: 393 VKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+ EE F PV ++ F T +E + N P GL++ +FTR ++
Sbjct: 354 MNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWR 399
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 302 bits (776), Expect = 1e-98
Identities = 128/407 (31%), Positives = 207/407 (50%), Gaps = 22/407 (5%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDALREKL 95
SINP + A V EAS D + + A A W +L +RG+++R++ D +
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL 155
L L + + GK++ E +V+ + + + GL+ ++ G+VIP ++ +++ PL
Sbjct: 61 EELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPL 120
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE------VFE 209
GVV IT +N P +L AL GN VV K + TP T+ + KL E V
Sbjct: 121 GVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVV- 179
Query: 210 RNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSG 269
N + G G E G+A+ + P ++ ++FTG T+ G + + + LEL G
Sbjct: 180 -NVVTG-------FGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGG 231
Query: 270 NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329
+ I+ DDAD+ AV V+ AGQ C RLL+ SIY +++LV + +++
Sbjct: 232 KSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRV 291
Query: 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIVE 385
GDPL+ T +GPL T + E+ + + +G ++LTGG G F +PTI+
Sbjct: 292 GDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILA 351
Query: 386 -ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
++ I +EE+F PVL V+ F EEA+ + N GL++ I+TR
Sbjct: 352 DVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTR 398
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 290 bits (744), Expect = 5e-94
Identities = 141/406 (34%), Positives = 220/406 (54%), Gaps = 12/406 (2%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
NP N + I TV S E+ E ++ +A + LPA KR +++ ++ + + + L
Sbjct: 4 RNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEEL 63
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNP 154
+LL+IE+GK + + EV+ I + A ++ L G IP + + P
Sbjct: 64 AKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREP 123
Query: 155 LGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP 214
+GVVG IT FNFP + A+ GN VV K + TPL I + K++ E LP
Sbjct: 124 IGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEA----GLP 179
Query: 215 GAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273
+ G G+E+G I +P+++++SFTGST VGL++ K LEL G++ +
Sbjct: 180 PGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPM 239
Query: 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333
I++ DAD++ AV + AGQ C +R+L+ E +Y L LV+ K++K+GDPL
Sbjct: 240 IVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPL 299
Query: 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEI-SPTADI 392
++ T LGPL +PE+ + E + + +GGKIL GG EG+F PT++E +P +
Sbjct: 300 DESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIV 357
Query: 393 VKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+KEE+F PVL + K + EEAV+I NS GL +S+FT K
Sbjct: 358 MKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALK 403
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 283 bits (726), Expect = 3e-91
Identities = 129/400 (32%), Positives = 192/400 (48%), Gaps = 15/400 (3%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
INP + A+ AS ++ + A A W P +R + I DA+ L
Sbjct: 2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEEL 61
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVV 158
RLL++E GK L E EV + + L + + + PLGVV
Sbjct: 62 ARLLTLEQGKPLAEAQFEVGGAVAWLRYTASLDLP---DEVIEDDDTRRVELRRKPLGVV 118
Query: 159 GVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218
I +NFP + W AL+ GN VV K +P TPL T+ + +L EV P +
Sbjct: 119 AAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEVL-----PPGVL 173
Query: 219 TSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278
GG E+G A+ P I +SFTGST G V + + + LEL GN+A I++ D
Sbjct: 174 NVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPD 233
Query: 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338
DI + + A +GQ C +RL +HESIY + LV + K +GD L+ GT
Sbjct: 234 VDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTT 293
Query: 339 LGPLHTPESRKNFEKG---IENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVK 394
LGP+ + ++K +E+ K++G K+L GG ++ G F+ PTIV + + IV
Sbjct: 294 LGPVQN---KMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVD 350
Query: 395 EELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
EE F PVL V+K+ +E + N GL +S+++ E
Sbjct: 351 EEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLE 390
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 281 bits (721), Expect = 9e-91
Identities = 139/381 (36%), Positives = 207/381 (54%), Gaps = 10/381 (2%)
Query: 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE 116
D + A + A K W P +R ++R+ + L E+ + L E G P+ E
Sbjct: 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFE 60
Query: 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA- 175
V I + A GL R+ G ++PS+ P + PLGVVGVI+ FNFP +L +
Sbjct: 61 VGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFP-LILAMRSV 119
Query: 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSF-CGGAEIGQAIAKD 234
AL GN VV K TP +T + L++E+FE LP + GG+EIG A+ +
Sbjct: 120 APALALGNAVVLKPDSRTP-VTGGL--LIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEH 176
Query: 235 PRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVG 294
PR+ ++SFTGST VG + + + K LEL GNN +I++DDAD+ LAV + F A
Sbjct: 177 PRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFL 236
Query: 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354
GQ C R+L+HES+Y +++LV K + +GDP + T++GPL
Sbjct: 237 HQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAI 296
Query: 355 IENIKSQGGKILTGGSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEA 413
+E+ + G ++LTGG+ EG F QPT+ +++P I +EE+F PV V+ F EEA
Sbjct: 297 VEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEA 353
Query: 414 VKINNSVPQGLSSSIFTRSPE 434
V++ N GLS+++FTR E
Sbjct: 354 VELANDTEYGLSAAVFTRDLE 374
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 273 bits (699), Expect = 2e-87
Identities = 130/402 (32%), Positives = 209/402 (51%), Gaps = 11/402 (2%)
Query: 40 NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99
NP + A V S +D E + A +A W +R ++ + + + + L
Sbjct: 5 NPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLI 64
Query: 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVG 159
LL E G + E ++ A G R++ G +PS+ P + + PLGVV
Sbjct: 65 DLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVA 124
Query: 160 VITAFNFPCAVLGWNA-CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218
IT FN+P +L AL GN VV K + TP+I + I +E+ E LP +F
Sbjct: 125 GITPFNYP-LILATKKVAFALAAGNTVVLKPSEETPVIGLKI----AEIMEEAGLPKGVF 179
Query: 219 TSF-CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277
GGAE+G + DPR+ +V+FTGST VG + + + K LEL G N +I++
Sbjct: 180 NVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLA 239
Query: 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337
DAD+ AVR+ F A GQ C + R+++ E +Y + + V ++K+GDP + T
Sbjct: 240 DADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDT 299
Query: 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEE 396
++GPL +P + ++ +E+ ++G K+LTGG + +GNF QPT++ +++P I +EE
Sbjct: 300 VIGPLISPRQVERIKRQVEDAVAKGAKLLTGG---KYDGNFYQPTVLTDVTPDMRIFREE 356
Query: 397 LFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
F PV V+ + EEA+++ N GLS++I T + FK
Sbjct: 357 TFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFK 398
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 8e-87
Identities = 105/277 (37%), Positives = 147/277 (53%), Gaps = 5/277 (1%)
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
A K W LP +R ++R+I D L E+ L L ++E GK + E +GEV ID +
Sbjct: 5 AAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRY 64
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A GL+ +L G +PS P PLGVVGVIT +NFP + W AL GN VV
Sbjct: 65 AAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVV 124
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245
K + TPL +A+ +L+ E LP + G G E+G A+ PR+ +SFTGS
Sbjct: 125 LKPSELTPLTALALAELLQEAG----LPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGS 180
Query: 246 TKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR 305
T VG + + + LEL G + +I+ +DAD+ AV +F A AGQ CT R
Sbjct: 181 TAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASR 240
Query: 306 LLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPL 342
LL+HESIY +++LV V V P+ + + GP+
Sbjct: 241 LLVHESIYDEFVEKLVTVLVDVDPDMPIAQEEIFGPV 277
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 270 bits (691), Expect = 4e-86
Identities = 131/399 (32%), Positives = 204/399 (51%), Gaps = 12/399 (3%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
++NP + IA V +AS ED + + A A + W + +RG ++ ++ + +
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADE 60
Query: 98 LGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERP--NHMMLETWNP 154
L RL S++ GK + +V D + G + ++ G VIP P N+ + E P
Sbjct: 61 LARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVRE---P 117
Query: 155 LGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP 214
+GVVG I +NFP W AL GN VV K A TPL + I +L++E P
Sbjct: 118 VGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEA----GFP 173
Query: 215 GAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273
+ G G G A+ + P + ++FTGST VG + Q + LEL G +A
Sbjct: 174 AGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSAN 233
Query: 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333
I+ DAD+ AVR+ GQ CT RLL+HESIY L++ + + ++ GDPL
Sbjct: 234 IVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPL 293
Query: 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTADI 392
+ T +GPL + ++ + +G ++LTGG + G FV+PTI + P I
Sbjct: 294 DPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRI 353
Query: 393 VKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+EE+F PV+ VM+F+ EEA++I N GL++ ++TR
Sbjct: 354 AQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTR 392
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 6e-86
Identities = 148/420 (35%), Positives = 223/420 (53%), Gaps = 17/420 (4%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
+++G+W A G T INP N + IATV E + ED + + A A S W LPA +
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++ +I D +RE L RL ++ GK L E ++ +V + + GL+ + G V
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVY 120
Query: 140 PSERPNHMMLETWN-PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
P H++ T P+GV G+IT +N+P W AL GN VV K + TPL TI
Sbjct: 121 DV--PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTI 178
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
A+ +L+ E LP + G GA +G +A+ P + LVSFTG T G + +
Sbjct: 179 ALFELIEEA----GLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA 234
Query: 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
K LEL G N I+ DAD + AV L AGQ C+ RLL+ ESI+ +
Sbjct: 235 GNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFV 294
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---- 373
L + K++K+G+ L+ T +GPL + E R+ I+ K +G +++ GG
Sbjct: 295 AALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDEL 354
Query: 374 SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
++G FV+PTI ++ T IV+EE+F PVL V +F T EEA+++ N P GL+ +++T+
Sbjct: 355 AKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKD 414
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 269 bits (690), Expect = 8e-86
Identities = 120/405 (29%), Positives = 194/405 (47%), Gaps = 18/405 (4%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
+ NP + +A V E + + + A EA W + +R ++ ++ D + +
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 98 LGRLLSIEMGKILPEGIGEVQEVIDMCD----FAVGLSRQLNGSVIPSERPNHMMLETWN 153
L L S++ GK P + +++ FA QL+G P + +
Sbjct: 61 LALLESLDTGK--PITLARTRDIPRAAANFRFFA-DYILQLDGESYPQD-GGALNYVLRQ 116
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213
P+GV G+IT +N P +L W AL GN VV K + TPL L E+ L
Sbjct: 117 PVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPL---TAWLLA-ELANEAGL 172
Query: 214 PGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
P + G G E G A+ P + L+SFTG T G + + LEL G N
Sbjct: 173 PPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNP 232
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I+ DAD+ AV + + ++ G+ C R+L+ SIY L++ V+ K +K+GDP
Sbjct: 233 NIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDP 292
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES----EGNFVQPTIVE-IS 387
L+ T +GPL + E + +E +++G ILTGG E G FV+PT++ +
Sbjct: 293 LDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLD 352
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+ + +EE+F PV+ V+ F EEA+++ N P GL++ ++TR
Sbjct: 353 NDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRD 397
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 269 bits (690), Expect = 2e-85
Identities = 132/422 (31%), Positives = 206/422 (48%), Gaps = 19/422 (4%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPA 77
G F+N ++ G T +INP + I V EA ED + +KA A + W ++
Sbjct: 5 GLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDP 64
Query: 78 PKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNG 136
+RG ++ ++ D + L L S++ GK L E G+V I + G + ++ G
Sbjct: 65 RERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQG 124
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
IP + N + P+GV G I +NFP +L W AL GN VV K A TPL
Sbjct: 125 KTIPIDG-NFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLS 183
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+ + +L+ E P + G G G AI+ + ++FTGST VG + +
Sbjct: 184 ALYLAELIKEA----GFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEA 239
Query: 256 VHQR-FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ K LEL G + I+ DDAD+ AV F GQ C R+ + ESIY
Sbjct: 240 AAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYD 299
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK---GIENIKSQGGKILTGGSV 371
+++ ++ +GDP + T GP S+ F+K IE+ K +G +LTGG
Sbjct: 300 EFVEKFKARAEKRVVGDPFDPDTFQGPQ---VSKAQFDKILSYIESGKKEGATLLTGGER 356
Query: 372 IESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
S+G F+QPT+ ++ I KEE+F PV+ ++KF+T +E ++ N GL++ +FT
Sbjct: 357 HGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFT 416
Query: 431 RS 432
+
Sbjct: 417 KD 418
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 265 bits (681), Expect = 2e-84
Identities = 130/412 (31%), Positives = 206/412 (50%), Gaps = 27/412 (6%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
I+P + + I V AS ED E+ + A E +K LPA +R E++ + L E+
Sbjct: 4 ISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEF 63
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP------SERPNHMMLETW 152
R +++E GK + + EV I+ + +++L G IP E +
Sbjct: 64 ARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGE--GRIGFTIR 121
Query: 153 NPLGVVGVITAFNFP----CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
P+GVV IT FNFP +G A+ GN VV K A TPL + + E+
Sbjct: 122 EPIGVVAAITPFNFPLNLVAHKVG----PAIAAGNAVVLKPASQTPLSALKLA----ELL 173
Query: 209 ERNKLPGAIFTSFCGGAE-IGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLEL 267
LP G E +G A+ DPR+ ++SFTGS VG + + + K LEL
Sbjct: 174 LEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAGLK--KVTLEL 231
Query: 268 SGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQV 327
N A+I+ DAD++ AV + A AGQ C + +R+ +HE IY L++ V K++
Sbjct: 232 GSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKL 291
Query: 328 KIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-I 386
+GDPL++ T +GP+ + + E+ +E G ++LTGG +G ++PT++ +
Sbjct: 292 VVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDV 348
Query: 387 SPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
P +V EE+FAPV+ + F T +EA+ + N P GL + +FT + K
Sbjct: 349 PPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALK 400
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 263 bits (674), Expect = 1e-83
Identities = 131/395 (33%), Positives = 200/395 (50%), Gaps = 7/395 (1%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
++P ++IATV +AS D + + A A W +R + + ++ DA+ E L
Sbjct: 2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEEL 61
Query: 99 GRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGV 157
L S GK L E+ +D F G +R L G P H + P+GV
Sbjct: 62 AALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGV 121
Query: 158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217
V I +N+P + W AL GN VV K + TTPL T+ + +L +EV PG +
Sbjct: 122 VAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAEVLP----PGVV 177
Query: 218 FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277
GGA G A+ PR+ +VS TGS + G V + + LEL G +I+ D
Sbjct: 178 NVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFD 237
Query: 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337
DAD+ AV + A AGQ CT R+ +HES+Y + LV+ +++GDP ++ T
Sbjct: 238 DADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDT 297
Query: 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEE 396
+GPL++ R+ +E ++LTGG E G F +PT+V ++ +IV+EE
Sbjct: 298 EMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEE 356
Query: 397 LFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+F PV+ V F +EA+++ N V GL+SS++TR
Sbjct: 357 IFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTR 391
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 262 bits (672), Expect = 6e-83
Identities = 132/420 (31%), Positives = 211/420 (50%), Gaps = 19/420 (4%)
Query: 24 FVNGKWK-AHGPTVSSI-NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F+NG+W + + NP + IA V A+ E+ + + A A W P KR
Sbjct: 4 FINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQ 63
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
+V+ + L E L L RL+++E GK L + G+V +++ +FA + L G + +
Sbjct: 64 QVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLEN 123
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
PLGVV IT FNFP + W +A+ CGN V K + P + +
Sbjct: 124 VARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLA 183
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR-- 259
+L+ E LP + GG E A+ P I VSF GST VG + +++R
Sbjct: 184 ELLQEA----GLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVG----EYIYERAA 235
Query: 260 -FGKCLLELSG-NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
GK + L G N ++M DAD++ +++ AA G AGQRC + +
Sbjct: 236 ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWI 295
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---- 373
+LV+ K++K+G + G +GP+ +P +++ E IE+ +G K++ G ++
Sbjct: 296 PKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGY 355
Query: 374 SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
GNFV PTI++ ++P I KEE+F PVL +++ T +EA+ I N+ P G ++IFTRS
Sbjct: 356 ENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRS 415
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 260 bits (667), Expect = 8e-82
Identities = 134/429 (31%), Positives = 227/429 (52%), Gaps = 31/429 (7%)
Query: 25 VNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+ G+ + SINP N ++ + V +A+ E E+ M+A EA + W + R +
Sbjct: 41 IGGERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARI 100
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ---LNGSVIP 140
+ + +R + H L E GK E + E ID ++ +RQ L
Sbjct: 101 LLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEY---YARQMLKLADGKPV 157
Query: 141 SERP---NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
RP N PLGV VI+ +NFP A++ A+V GN V+ K A TP+I
Sbjct: 158 ESRPGEHNRYFYI---PLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIA 214
Query: 198 IAITKLVSEVFERNKLP-GAIFTSFC--GGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
K V EV E LP G + +F G+E+G + P+ ++FTGS +VGL + +
Sbjct: 215 ---AKFV-EVLEEAGLPAGVV--NFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYE 268
Query: 255 ---TVH--QRFGK-CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
V Q + K + E+ G +AI++ +DAD+ LA S++ +A G +GQ+C+ C R ++
Sbjct: 269 RAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIV 328
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368
HE +Y VL+++V++ K++ +G+P E +GP+ S IE I + G+++ G
Sbjct: 329 HEDVYDEVLEKVVELTKELTVGNP-EDNAYMGPVINQASFDKIMSYIE-IGKEEGRLVLG 386
Query: 369 GSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
G +S+G F+QPTI ++ P A I++EE+F PV+ +K + F+ A++I N+ GL+ +
Sbjct: 387 GEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGA 446
Query: 428 IFTRSPENI 436
+ + + E++
Sbjct: 447 VISNNREHL 455
|
Length = 514 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 256 bits (657), Expect = 5e-81
Identities = 132/400 (33%), Positives = 208/400 (52%), Gaps = 13/400 (3%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
I P + +ATV A ED + +K+ A K W +RG ++R+ D LRE+ +
Sbjct: 2 IEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEI 61
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN-PLGV 157
RL +I+ GK + E ++ D ++ GL+ L+G +P P T PLGV
Sbjct: 62 ARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVP--LPGGSFAYTRREPLGV 119
Query: 158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217
I A+N+P + W + AL CGN +V+K +P TPL + L++E+ LP +
Sbjct: 120 CAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTAL----LLAEILTEAGLPDGV 175
Query: 218 FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277
F GG E GQ + + P ++ VSFTGS G V + LEL G + +II D
Sbjct: 176 FNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD 235
Query: 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337
DAD++ AV + A + GQ C+ R+ + SI ++LV+ K+++IGDPL++ T
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDT 295
Query: 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-----GNFVQPTI-VEISPTAD 391
+G L + E + IE+ K +G K+L GG + E G +V P + + +
Sbjct: 296 QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMT 355
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
IV+EE+F PV+ ++ F T EE ++ N GL++ +FTR
Sbjct: 356 IVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR 395
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 253 bits (650), Expect = 3e-80
Identities = 119/383 (31%), Positives = 189/383 (49%), Gaps = 18/383 (4%)
Query: 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQ 118
E + A W + +R ++R++ D LRE+ L RL+++EMGK + E EV+
Sbjct: 2 EAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVE 61
Query: 119 EVIDMCDF-AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN--- 174
+ +C + A L I ++ + + PLGVV I +NFP W
Sbjct: 62 KCAWICRYYAENAEAFLADEPIETDAGKAYV--RYEPLGVVLGIMPWNFPF----WQVFR 115
Query: 175 -ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTS-FCGGAEIGQAIA 232
A L+ GN V+ K A P +AI E+F P +F + ++ IA
Sbjct: 116 FAAPNLMAGNTVLLKHASNVPGCALAIE----ELFREAGFPEGVFQNLLIDSDQVEAIIA 171
Query: 233 KDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAA 292
DPR+ V+ TGS + G V + K +LEL G++ I++DDAD+ AV++ +
Sbjct: 172 -DPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGR 230
Query: 293 VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFE 352
+ AGQ C +R ++HE +Y L++ V+ +K+GDP+++ T LGPL + R
Sbjct: 231 LQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELH 290
Query: 353 KGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFE 411
+ +E + G +L GG + G F PT++ ++P EELF PV V+K + E
Sbjct: 291 EQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEE 350
Query: 412 EAVKINNSVPQGLSSSIFTRSPE 434
EA+ + N P GL S+FT E
Sbjct: 351 EAIALANDSPFGLGGSVFTTDLE 373
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 254 bits (652), Expect = 3e-80
Identities = 121/406 (29%), Positives = 189/406 (46%), Gaps = 23/406 (5%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
INP Q +A V AS D + + A A W +R ++R++ LRE
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGV 157
L + +++ G + +G+V + D+ GL +L G IP ++ P GV
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGV 119
Query: 158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER---NKLP 214
V I AFN P L GN VV K PL + + +L EV N LP
Sbjct: 120 VARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREVLPPGVFNILP 179
Query: 215 GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
G GA G A+ + P + ++ GS G + + + LEL G NA+I
Sbjct: 180 G-------DGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALI 232
Query: 275 IMDDADIKLAVRSVLFAAVG----TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330
+ DAD + A + A G GQ C + RL +HESIY VL ++V+ +K+G
Sbjct: 233 VFPDADPEAAADA---AVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVG 289
Query: 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG----SVIESEGNFVQPTIV-E 385
DP + T +GPL + + I++ K +G +++TGG G +V+PT+ +
Sbjct: 290 DPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFAD 349
Query: 386 ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
++P I +EE+F PVL V++++ E V N V GL+++I+T
Sbjct: 350 VTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTN 395
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 252 bits (646), Expect = 2e-79
Identities = 133/416 (31%), Positives = 214/416 (51%), Gaps = 14/416 (3%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F++G++ + G T INP N + IATV A+ ED E + A A W + +RG
Sbjct: 1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERG 60
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIP 140
++R+ D +RE+ L +L +++ GK L E I ++ D+ +F GL+ LNG +IP
Sbjct: 61 RILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIP 120
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
P+ PLGV I A+N+P + W AL GN +V+K + TPL + +
Sbjct: 121 LGGPSFAYTIR-EPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 201 TKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
+++ E LP +F G GAE+G + P ++ VSFTG G +
Sbjct: 180 AEIMEEA----GLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGH 235
Query: 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
+EL G + +I+ DDAD++ AV + +AGQ C+ R+ +H+ I + L +
Sbjct: 236 LKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLAR 295
Query: 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SE 375
LV+ +++K+GDP ++ T +GPL + R IE K++G + TGG E
Sbjct: 296 LVERTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQN 355
Query: 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
G FV+PT+ + + IV+EE+F PV+ V+ F +E + N GL+ +FT
Sbjct: 356 GFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFT 411
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 249 bits (639), Expect = 2e-78
Identities = 128/403 (31%), Positives = 198/403 (49%), Gaps = 11/403 (2%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
INP I + A+ ED + ++A A W + +R + +R I + +RE+ L
Sbjct: 2 INPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREEL 61
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN---GSVIPSERPNHMMLETWNPL 155
L + + GK L E +V +V ++ L+ QL+ +P + P+
Sbjct: 62 AELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPV 121
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215
GVVG+IT +NFP + W AL G VV K + T L + + ++ +E LP
Sbjct: 122 GVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEA----GLPP 177
Query: 216 AIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
+ G G E G +A P I +SFTGST G V Q Q LEL G + II
Sbjct: 178 GVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPII 237
Query: 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
+ DDAD++ AV +F GQ C+ RLL+HESI L++L + +++GDPLE
Sbjct: 238 VFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLE 297
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTI-VEISPTAD 391
+G LGPL + + I K +G ++L GG +G F+ PT+ ++ +
Sbjct: 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSR 357
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
I +EE+F PVL V F T +EA+ + N GL++++ +R E
Sbjct: 358 IWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAE 400
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 249 bits (637), Expect = 4e-78
Identities = 127/408 (31%), Positives = 197/408 (48%), Gaps = 14/408 (3%)
Query: 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95
+ NP + +A V A +D EE + A +A + LPA +R ++ L E+
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP---SER-PNHMMLET 151
L + +E GK + + GEV ID A + ++ G V+P S R L
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVR 120
Query: 152 WNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
P+G V IT FNFP ++ A+ G V K A TPL + ++ EV
Sbjct: 121 RFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSAL----ILGEVLAET 176
Query: 212 KLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271
LP F+ + + D RI L+SFTGS VG ++ ++ K +LEL GN
Sbjct: 177 GLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNA 234
Query: 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331
A+I+ DAD+ A + ++F A AGQ C + +R+L+H S+Y +LV K +K GD
Sbjct: 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGD 294
Query: 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTA 390
P + T +GP+ + + E + G K+LTGG +G ++PTI+E + P
Sbjct: 295 PKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDM 351
Query: 391 DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
++ EE+F PV+ V + F+EA+ N GL + +FTR E +
Sbjct: 352 EVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALR 399
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 249 bits (637), Expect = 5e-78
Identities = 123/400 (30%), Positives = 202/400 (50%), Gaps = 12/400 (3%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALREKLH 96
+P + A + D + ++A A + W+ L +RG ++ +I +RE
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLG 156
L RL S++ GK L + +V+ ++ G + +L+G IP P + + P G
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHG 119
Query: 157 VVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216
V G I +N+P + G + AL GN VV K A PL + + E+ E LP
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLA----ELAEEAGLPAG 175
Query: 217 IFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275
G GAE G A+ P + +SFTGS + G+ V + + LEL G + I+
Sbjct: 176 ALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIV 235
Query: 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335
DAD++ A+ V+ A + AGQ C+ RLL+H SIY VL++LV+ ++ +++G LE
Sbjct: 236 FADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE- 294
Query: 336 GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTAD 391
LGPL + + E + +++G +I+ GG + E + G FV PT++ ++ P +
Sbjct: 295 DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSR 354
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+ +EE+F PVL VM F EA+ + N GL + ++TR
Sbjct: 355 LAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTR 394
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 248 bits (635), Expect = 1e-77
Identities = 132/415 (31%), Positives = 209/415 (50%), Gaps = 16/415 (3%)
Query: 27 GKWKAHGP--TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVV 84
G+W+ T+ +NP + +A + AS ED +E +A + A K W +R E++
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 85 RQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERP 144
+ L E+ + L E G + E + + A ++ G ++PS+ P
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 145 ---NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
N + E PLGVVGVI+ +NFP + + AL GN VV K A TP IT +
Sbjct: 121 GKENRVYRE---PLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTP-ITGGL- 175
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
L++++FE LP + G G+EIG A + P L+SFTGST VG + + +
Sbjct: 176 -LLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHL 234
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL GNN ++++DADI AV + +F GQ C R+++HE +Y +++
Sbjct: 235 KKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKF 294
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQ 380
V+ K + GDP + T++GPL IE +G +L GG EGN ++
Sbjct: 295 VERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLE 351
Query: 381 PTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
PT+ +++ +I +EE+F PV ++K EEA+++ N GLS ++FT E
Sbjct: 352 PTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLE 406
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 2e-77
Identities = 118/406 (29%), Positives = 194/406 (47%), Gaps = 20/406 (4%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
I+P++ IA ASLE ++ A K W +P +R +V + + L +
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE---TWNPL 155
L+ +MG+ + + GE++ +++ + + ++ P E PL
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARY---MISIAEEALADIRVPEKDGFERYIRREPL 117
Query: 156 GVVGVITAFNFP--CAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
GVV +I +N+P AV NA I AL+ GN V+ K +P TPL F
Sbjct: 118 GVVLIIAPWNYPYLTAV---NAVIPALLAGNAVILKHSPQTPLCGERFAAA----FAEAG 170
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
LP +F E A+ DPRI VSFTGS G +Q+ RF K LEL G +
Sbjct: 171 LPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDP 230
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
+ DAD+ A S++ A +GQ C + R+ +HESIY ++ V V K K+GDP
Sbjct: 231 AYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDP 290
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG---SVIESEGNFVQPTI-VEISP 388
L+ T LGP+ + + I + ++G + L G ++ G ++ PT+ +
Sbjct: 291 LDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDH 350
Query: 389 TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
+ +++EE F PV+ +MK ++ EA+ + N GL++S++T+
Sbjct: 351 SMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIA 396
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 2e-77
Identities = 128/390 (32%), Positives = 188/390 (48%), Gaps = 10/390 (2%)
Query: 45 QKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSI 104
+ V A D + + A + W P +R V+R+ D L E + +
Sbjct: 2 AVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVR 61
Query: 105 EMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAF 164
E G I P+ EV I A GL Q G ++PS P + L PLGVVGVI+ F
Sbjct: 62 ESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPF 120
Query: 165 NFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG 223
NFP +L + AL GN VV K P TP ++ +++ +FE LP + G
Sbjct: 121 NFPL-ILAMRSVAPALALGNAVVLKPDPRTP---VSGGVVIARLFEEAGLPAGVLHVLPG 176
Query: 224 GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKL 283
GA+ G+A+ +DP ++++SFTGST VG V + + K LEL G NA+I++DDAD+ L
Sbjct: 177 GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDL 236
Query: 284 AVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343
A + + A GQ C R L+HES+ +L K + +GDP LGPL
Sbjct: 237 AASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLI 296
Query: 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402
+++ + G ++ GG +G F +PT++ + P EE+F PV
Sbjct: 297 NARQLDRVHAIVDDSVAAGARLEAGG---TYDGLFYRPTVLSGVKPGMPAFDEEIFGPVA 353
Query: 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
V F + EEAV + N GLS+ I +R
Sbjct: 354 PVTVFDSDEEAVALANDTEYGLSAGIISRD 383
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 247 bits (634), Expect = 2e-77
Identities = 124/422 (29%), Positives = 197/422 (46%), Gaps = 18/422 (4%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ G+W A T+ ++P + + V EA+ D + + A A + W L +
Sbjct: 2 FIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAE 61
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGSV 138
R V+R++ DAL + L RL + E G I + + + L+R
Sbjct: 62 RAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFP--- 118
Query: 139 IPSERPNHMM---LETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
RP L P+GVV I +N P + AL G VV K +P TPL
Sbjct: 119 FEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPL 178
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+ + E LP + E+G+ + + P + VSFTGST G +
Sbjct: 179 DAYLLAEAAEEA----GLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAV 234
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+R + LEL G +A I++DDAD+ AV ++ A++ GQ C R+L+ S Y
Sbjct: 235 CGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDE 294
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-- 373
V++ L +K+GDPL+ T +GPL + R+ E I +++G +++TGG
Sbjct: 295 VVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGL 354
Query: 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
G FV+PT+ ++ I +EE+F PVL V+ + ++AV+I N GLS S++T
Sbjct: 355 DRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTAD 414
Query: 433 PE 434
E
Sbjct: 415 VE 416
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 246 bits (630), Expect = 2e-76
Identities = 133/418 (31%), Positives = 211/418 (50%), Gaps = 16/418 (3%)
Query: 23 CFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+ GKW G T NP + IA V + + + + +A W +L A +R
Sbjct: 27 GLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASER 86
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
+++R+ D + L +L+++E GK L E IGEV ++ ++++ G +IP
Sbjct: 87 SKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIP 146
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
S P+ +L P+GVVG IT +NFP A++ AL G VV K + TPL +A
Sbjct: 147 SPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALA- 205
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG--LMVQ--QT 255
+E+ + +P + G A EIG A+ P++ ++FTGST VG LM T
Sbjct: 206 ---AAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAAT 262
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
V + LEL GN I+ DDAD+ +AV+ L + +GQ C R+L+ E IY
Sbjct: 263 VK----RVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDK 318
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
+ +++ +GD E+G GPL + + E +++ S+G K+L GG
Sbjct: 319 FAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLG 378
Query: 376 GNFVQPT-IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
G F +PT + +++ I +EE+F PV + +F+T EEA+ I N GL++ IFTR
Sbjct: 379 GTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRD 436
|
Length = 498 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 244 bits (625), Expect = 2e-76
Identities = 118/398 (29%), Positives = 197/398 (49%), Gaps = 13/398 (3%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
NP + + I V D EE + ++ LP +R ++ + D L+++
Sbjct: 4 HNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEF 63
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNP 154
++++ E GK + + EV ID A + ++ G IP + N + P
Sbjct: 64 AKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREP 123
Query: 155 LGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP 214
+GVV IT FNFP ++ A+ G VV K A TPL + + K++ E
Sbjct: 124 VGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEA---GVPE 180
Query: 215 GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
G + +G A A D R++++SFTGS VG + + + LEL GN +I
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEAL--RANAGGKRIALELGGNAPVI 238
Query: 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
+ DAD+ A+ ++ AGQ C + +R+ +HE +Y ++ V K++K+GDPL+
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISP-TADIV 393
+ T +GPL + E+ + E+ +E G ++L GG E +G +PT++E P +
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGG---ERDGALFKPTVLEDVPRDTKLS 355
Query: 394 KEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
EE F PV+ ++++ FEEA++I NS GL + IFTR
Sbjct: 356 TEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTR 393
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 244 bits (625), Expect = 3e-76
Identities = 123/405 (30%), Positives = 207/405 (51%), Gaps = 16/405 (3%)
Query: 31 AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDA 90
AHG V+ + + V A+ + +++G W + +R V+ ++ D
Sbjct: 5 AHGVVVARYAEGTVEDVDAAVAAARKAFDKGP---------WPRMSGAERAAVLLKVADL 55
Query: 91 LREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE 150
+R + L + ++E GK + + GE++ D+ +A L+R L+G + + + L
Sbjct: 56 IRARRERLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLV 115
Query: 151 TWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER 210
P+GVVG+IT +NFP +L AL G VV K + T T+ + +L+ E
Sbjct: 116 LREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEA--- 172
Query: 211 NKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSG 269
LP + G GA +GQA+ + P + +VSFTGST+VG + + K LEL G
Sbjct: 173 -GLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGG 231
Query: 270 NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329
N I+ DAD+ A +V+F AG+ C + RLL+HESI + +V ++V++
Sbjct: 232 KNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRV 291
Query: 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EIS 387
GDPL+ T +G + ++ +++G +L GG + S G F QPTI +++
Sbjct: 292 GDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVT 351
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
P I +EE+F PVL V+ F T +EA+ + N GLS+ ++++
Sbjct: 352 PDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKD 396
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 245 bits (627), Expect = 5e-76
Identities = 122/422 (28%), Positives = 219/422 (51%), Gaps = 14/422 (3%)
Query: 24 FVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+NG+ + SINP + ++ + TV +AS E E ++A ++A + W + +R
Sbjct: 36 VINGERVETENKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEERAA 95
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
++ + +R + H LL E+GK E EV E ID ++ +L +
Sbjct: 96 ILFKAAAIVRRRRHEFSALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIELAKGKPVNS 155
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
R + P GV VI+ +NFP A++ +V GNCVV K A P+I
Sbjct: 156 REGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFV- 214
Query: 203 LVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ------QT 255
E+ E LP + G G+E+G + P+ SL++FTGS +VG + Q
Sbjct: 215 ---EILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQP 271
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ + + E+ G + +I+ +DADI+LA +S +A G AGQ+C+ R ++HE +Y
Sbjct: 272 GQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDE 331
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
V+++ V++ + +K+G P +GP+ +S + IE K++ G++++GG +S+
Sbjct: 332 VVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAE-GRLVSGGCGDDSK 390
Query: 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
G F+ PTI ++ A + +EE+F PV+ ++ F+EA++I N+ GL+ + + + +
Sbjct: 391 GYFIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRD 450
Query: 435 NI 436
+I
Sbjct: 451 HI 452
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 245 bits (627), Expect = 1e-75
Identities = 125/428 (29%), Positives = 199/428 (46%), Gaps = 19/428 (4%)
Query: 22 GCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+NG+ G I+P + + I V A ED + + + A W P +R
Sbjct: 34 IPIINGEETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEER 93
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI- 139
E++ + D L L L + E GK L + EV+E ID C + +R+L
Sbjct: 94 AEILEKAADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPEL 153
Query: 140 --PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
P+ N + L GV I+ +NFP A+ AL GN V+ K A TPLI
Sbjct: 154 PGPTGELNGLELH---GRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA 210
Query: 198 IAITKLVSEVFERNKLPG-AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+L +P + G EIG+A+ PRI V FTGST+ ++ + +
Sbjct: 211 ARAVEL----LHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRAL 266
Query: 257 HQRFGK--CLL-ELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
+R G L+ E G NA+I+ A + AV+ V+ +A G+AGQRC+ R L + E I
Sbjct: 267 AERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIA 326
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
+ ++ L +K+GDP + T +GPL + K E ++ + ++ + +
Sbjct: 327 ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDD 385
Query: 374 SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKF--QTFEEAVKINNSVPQGLSSSIFTR 431
G FV P I+EI D+ E+F P+L+V++F + +EA++ N+ GL+ I +R
Sbjct: 386 GNGYFVAPGIIEIVGIFDL-TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSR 444
Query: 432 SPENIFKW 439
I W
Sbjct: 445 DEREIEYW 452
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 241 bits (616), Expect = 7e-75
Identities = 127/402 (31%), Positives = 200/402 (49%), Gaps = 15/402 (3%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
INP Q I V + D + + A A W PA +RG+++ +I DAL + L
Sbjct: 2 INPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEEL 61
Query: 99 GRLLSIEMGKIL-PEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGV 157
RLL++E G L + E + D+ + GL+ +L G +P P+ + PLGV
Sbjct: 62 ARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPF-GPDVLTYTVREPLGV 120
Query: 158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217
VG I +N P + ALV GN VV K A PL + + +++++V LP +
Sbjct: 121 VGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-----LPAGV 175
Query: 218 FTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276
G G E G A+ P + V+FTGST+VG ++ + R LEL G + +I+
Sbjct: 176 LNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVF 235
Query: 277 DDADIKLAVRSVLFAAVGT-AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335
DAD+ AV + T GQ CT RL +HE IY L++LV ++KIGDPL++
Sbjct: 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDE 295
Query: 336 GTLLGPLHTPESRKNFEKGIE-NIKSQGGKILTGGS----VIESEGNFVQPTIV-EISPT 389
T +G + + + I+ + + G +L GG ++G FVQPTI +
Sbjct: 296 ATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNE 355
Query: 390 ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+ +EE+F PVL + ++ +E + + N GL++ ++TR
Sbjct: 356 WRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTR 397
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 238 bits (609), Expect = 7e-74
Identities = 129/401 (32%), Positives = 195/401 (48%), Gaps = 12/401 (2%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKL 95
SI+P + I T + + + E + A A W P R V+ ++ DA
Sbjct: 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDPR-LRARVLLELADAFEANA 59
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL 155
L RLL++E GKIL E E+ I + GL+R G +I E P L P+
Sbjct: 60 ERLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPE-PGSFSLVLREPM 118
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215
GV G+I +N P +L + AL G VV K A T I AI ++++E+ LP
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPA 175
Query: 216 AIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
+ F G+E + P + ++SFTGST G + + LEL G I
Sbjct: 176 GVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCI 235
Query: 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
+ DDAD+ A+ + A AGQ C R+L+ SI V D+L VK+G L+
Sbjct: 236 VFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLD 295
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGK-ILTGGSVIE--SEGNFVQPTIVEIS-PTA 390
+ +GPL + ++ +E + G + +L GG V E ++G F++PT++E+ P A
Sbjct: 296 PASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDA 355
Query: 391 DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
DIV+EE+F PVL + F EAV + N GL++S++TR
Sbjct: 356 DIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTR 396
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 3e-73
Identities = 120/413 (29%), Positives = 194/413 (46%), Gaps = 8/413 (1%)
Query: 23 CFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+NG+ A G NP + +A + EAS + + A A W + +R
Sbjct: 5 LLINGELVAGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERA 64
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIP 140
E + ++ DA+ E RL S+ GK L + E+ ++D+ F G +R L G
Sbjct: 65 EALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAG 124
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
H + +P+GVV I +N+P + W AL GN VV K + TPL + +
Sbjct: 125 EYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKL 184
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L +++ PG + GA +G A+ P++ +VS TGS G V
Sbjct: 185 AELAADILP----PGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSV 240
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
+ LEL G +I+ DDAD+ V + AGQ CT R+ IY ++ +L
Sbjct: 241 KRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKL 300
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG-GKILTGGSVIESEGNFV 379
+K+GDP ++ T LGPL + R +E K+ G +++TGG + +G +
Sbjct: 301 AAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYY 360
Query: 380 QPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+PT++ +IV+ E+F PV+ V F ++AV+ N GL+SS++TR
Sbjct: 361 EPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTR 413
|
Length = 475 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 236 bits (603), Expect = 1e-72
Identities = 133/431 (30%), Positives = 213/431 (49%), Gaps = 46/431 (10%)
Query: 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
G F+NGKW + + +INP + +A+V++A ED + + A A + W LP
Sbjct: 23 GHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHV 82
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCD-------------F 126
R + +I +++ L S++ GK ++E D CD +
Sbjct: 83 RARHLYRIARHIQKHQRLFAVLESLDNGK-------PIRESRD-CDIPLVARHFYHHAGW 134
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
A L +L G W P+GVVG I +NFP +L W C AL GN VV
Sbjct: 135 AQLLDTELAG---------------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVV 179
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
K A TPL + L +E+ LP + G G A+A P + V+FTGST
Sbjct: 180 LKPAEYTPLTAL----LFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGST 235
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+VG +++ K LEL G + I+ DDAD+ AV ++ A GQ C RL
Sbjct: 236 EVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRL 295
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
L+ ES+ + ++ +L + +++GDPL+K +G + P K + +E +++G +
Sbjct: 296 LVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVF 355
Query: 367 TGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
G+ + S+G F PT+ + P + I +EE+F PVL V+ F+T +EAV + N+ P GL+
Sbjct: 356 QPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLA 415
Query: 426 SSIFTRSPENI 436
+S+++ EN+
Sbjct: 416 ASVWS---ENL 423
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 234 bits (600), Expect = 3e-72
Identities = 131/420 (31%), Positives = 218/420 (51%), Gaps = 15/420 (3%)
Query: 22 GCFVNGKW-KAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAP 78
G F+N ++ K+ G T+ ++NP + IA+V A ED ++ +KA +A + W ++
Sbjct: 9 GLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGE 68
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKIL-PEGIGEVQEVIDMCDFAVGLSRQLNGS 137
+RGE++ ++ D + + L + +++ GK +G++ E+I + + G + ++ G
Sbjct: 69 ERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGK 128
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
IP+ PN + P GV G I +N+P A+ W AL GN VV K A TPL
Sbjct: 129 TIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSL 187
Query: 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ LV E P + G GA G A+A+ P + ++FTGST G +V +
Sbjct: 188 LYFANLVKEA----GFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
Q LE G + ++ +DAD+ AV+ + +GQ CT R+ + ESIY
Sbjct: 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKF 303
Query: 317 LDQLVDVYKQV-KIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV---I 372
+++ V+ KQ K+G P + T++GP + IE K +G K++ GG
Sbjct: 304 VEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEG 363
Query: 373 ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+G F+ PTI ++ IVKEE+F PV+ + KF+T+EEA+K N GL++++FT+
Sbjct: 364 LGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTK 423
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 5e-72
Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 85 RQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERP 144
R+I +RE+ + L+ E GKI EV D D+ +R+ G +I S+RP
Sbjct: 2 RKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRP 61
Query: 145 NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLV 204
+L LGV I +NFP ++ AL+ GN +V K + TP IA K+V
Sbjct: 62 GENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIV 121
Query: 205 SEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
E+ LP +F G G +GQ +A +P++++VS TGS G + + K
Sbjct: 122 DEI----GLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKV 177
Query: 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
LEL G I+MDDAD+ LAV++++ + V +GQ C R+ + + IY +++L +
Sbjct: 178 CLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEA 237
Query: 324 YKQVKIGDPLEKGTL-LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382
+ V+ G+P E+ + +GPL + + E+ + +G ++ GG +E +G + PT
Sbjct: 238 MQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPT 297
Query: 383 -IVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
++++ I+ EE F PVL V+ F T EEA+ + N GL+SSI+T++
Sbjct: 298 LLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQN 348
|
Length = 409 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 233 bits (595), Expect = 6e-72
Identities = 116/403 (28%), Positives = 192/403 (47%), Gaps = 18/403 (4%)
Query: 40 NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99
NP + + TV + E E + + L +R ++ + L +
Sbjct: 5 NPYTGEVVGTVPAGTEEALREALALAASYRS---TLTRYQRSAILNKAAALLEARREEFA 61
Query: 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNH----MMLETWNPL 155
RL+++E G L + EV D+ FA + + +G + + + PL
Sbjct: 62 RLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPL 121
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215
GVV IT FN P + A+ N +V K + TPL I + L+ E LP
Sbjct: 122 GVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEA----GLPP 177
Query: 216 AIFTSFCGG-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274
+ + G EIG + P + LV+FTG VG + T + + LLEL GN+ +I
Sbjct: 178 DMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYK--RQLLELGGNDPLI 235
Query: 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334
+MDDAD++ A + + +GQRCT +R+L+HES+ +D LV+ + +GDP++
Sbjct: 236 VMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMD 295
Query: 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTADIV 393
T +G + E+ E +E +QG ++L G + +G PT+++ + P A++V
Sbjct: 296 PATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGN---QRQGALYAPTVLDHVPPDAELV 352
Query: 394 KEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
EE F PV V++ + +EA+ I+NS GLSS + T + I
Sbjct: 353 TEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTI 395
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 8e-72
Identities = 124/402 (30%), Positives = 203/402 (50%), Gaps = 7/402 (1%)
Query: 40 NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99
NP + I +V + +++ E ++A EA K W A +R ++R+ + + E L
Sbjct: 3 NPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDDLA 62
Query: 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVG 159
RL+++E GK L E GE+ ++ ++++ G IPS + + ++ P+GV
Sbjct: 63 RLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCA 122
Query: 160 VITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFT 219
IT +NFP A++ A AL G VV K A TPL +A+ +L + +P +
Sbjct: 123 AITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQA----GIPKGVLN 178
Query: 220 SFCG--GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277
G E+G + P + +SFTGST VG ++ + K +EL GN I+ D
Sbjct: 179 VITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFD 238
Query: 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337
DAD+ AV + + AGQ C RL +H+ IY +L + K++K+G+ L++G
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGV 298
Query: 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEISPTADIVKEE 396
GPL ++ + EK I + +G K++TGG E GNF +PT+ ++ + KEE
Sbjct: 299 TQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEE 358
Query: 397 LFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
F P+ V KF EE + I N GL++ F+R I++
Sbjct: 359 TFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWR 400
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 233 bits (595), Expect = 2e-71
Identities = 126/426 (29%), Positives = 207/426 (48%), Gaps = 17/426 (3%)
Query: 23 CFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+ G+W + S++P ++ + T +A + E ++A A K W + P R
Sbjct: 21 LVIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRA 80
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF-AVGLSRQLNGSVIP 140
++ + D LR + L L+ E+GK E I +V E ID + A R +V
Sbjct: 81 RLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEV 140
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
P + LG VI+ +NFP A+ + GN V+ K A ++
Sbjct: 141 VPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYK- 199
Query: 201 TKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
V E+F P + G G E+G + + RI ++FTGS + G + + +
Sbjct: 200 ---VFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARL 256
Query: 260 ------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY 313
F + +E G NAII+ + AD +L V V+ +A G GQ+C+ RL++ + Y
Sbjct: 257 APGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY 316
Query: 314 QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
+ VL++L+ +++ +G P E GT LGP+ E IE+ K++ G+++ GG +E
Sbjct: 317 EPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNE-GQLVLGGKRLE 375
Query: 374 SEGNFVQPTIVEI-SPTADIVKEELFAPVL--YVMKFQTFEEAVKINNSVPQGLSSSIFT 430
EG FV PT+VE P A I +EE+F PVL K F EA+++ NS P GL+ +++
Sbjct: 376 GEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYS 435
Query: 431 RSPENI 436
R E++
Sbjct: 436 RKREHL 441
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 3e-71
Identities = 121/409 (29%), Positives = 192/409 (46%), Gaps = 20/409 (4%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDALREKLH 96
INP + I T +A D + + A A + W A +R +RQ+ +AL +
Sbjct: 2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDW-STDAEERARCLRQLHEALEARKE 60
Query: 97 HLGRLLSIEMGKILP-EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLET---- 151
L LL E+G + +V I + L+
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVR 120
Query: 152 WNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
P+GVV IT +NFP + AL GN VV K AP TPL + + ++++E
Sbjct: 121 REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAET---- 176
Query: 212 KLPGAIF---TSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
LP + T +G+A+ DPR+ +VSFTGST VG + + LLEL
Sbjct: 177 DLPAGVVNVVTG--SDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELG 234
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
G +A I++DDAD+ A + + + AGQ C RLL+ S Y V++ L ++ +
Sbjct: 235 GKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALP 294
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES--EGNFVQPTI-VE 385
+GDP + GT++GPL + R E I + +G +++TGG +G +V+PT+ +
Sbjct: 295 VGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFAD 354
Query: 386 ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
+ I +EE+F PVL V+ + +EAV+I N GLS +++ +
Sbjct: 355 VDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVD 403
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 230 bits (589), Expect = 4e-71
Identities = 113/367 (30%), Positives = 186/367 (50%), Gaps = 11/367 (2%)
Query: 72 WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS 131
W L +R ++R+ + L+ L RL+S E GK L E EV + D ++
Sbjct: 16 WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAY 75
Query: 132 RQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI--ALVCGNCVVWKG 189
+ G + + P GV+ V FNFP L N I AL+ GN VV+K
Sbjct: 76 HERTGER-ATPMAQGRAVLRHRPHGVMAVFGPFNFP-GHLP-NGHIVPALLAGNTVVFKP 132
Query: 190 APTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
+ TP A+ +L+ E++E LP + GG E G+A+A I + FTGS G
Sbjct: 133 SELTP----AVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATG 188
Query: 250 LMVQQTVHQRFGKCL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
L++ + R GK L LE+ GNN +++ D ADI A ++ +A TAGQRCT RRL++
Sbjct: 189 LLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIV 248
Query: 309 HESIY-QTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367
+ L++LV+ K+++IG P + +GPL + + +++ + GG+ L
Sbjct: 249 PDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLL 308
Query: 368 GGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
+ + F+ P I++++ AD+ EE+F P+L V ++ F+EA+ + N+ GLS+
Sbjct: 309 AMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAG 368
Query: 428 IFTRSPE 434
+ +
Sbjct: 369 LLSDDEA 375
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 8e-71
Identities = 129/426 (30%), Positives = 209/426 (49%), Gaps = 24/426 (5%)
Query: 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
G F++G++ G T +++P N+ + +V D + KA EA K W EL A +
Sbjct: 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAE 61
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCD----FAVGLSRQLN 135
R + +I D + + + L ++ G+ L + Q+VI + FA ++
Sbjct: 62 RKRYLHKIADLIEQHADEIAVLECLDCGQPLRQ---TRQQVIRAAENFRFFADKCEEAMD 118
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
G P H+ P+G VG+IT +N P + W AL GN VV K A +PL
Sbjct: 119 GRTYPV--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPL 176
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
T A ++E+ + LP +F G G E G+A+ P + VSFTG T G ++ +
Sbjct: 177 -TAAR---LAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMR 232
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ +EL G + +I+ DDAD++ A+ +V+F G+RCT RLL+ ESI +
Sbjct: 233 NGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAE 292
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++LV+ + +++G PL+ T +GPL PE +E + +G IL GG +
Sbjct: 293 DFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPT 352
Query: 375 E-------GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
GN+V PT+ I +EE+F PVL V+ F+ EEA++ N GL+
Sbjct: 353 FRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAG 412
Query: 427 SIFTRS 432
++T
Sbjct: 413 YVWTND 418
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 229 bits (587), Expect = 1e-70
Identities = 106/401 (26%), Positives = 183/401 (45%), Gaps = 15/401 (3%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
NP + + V + + A + W L R + + + AL + L
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLE------TW 152
LL E GK + EV ++ D+A + ++ P + P +++ +
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLA---PRKVPTGLLMPNKKATVEY 117
Query: 153 NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
P GVVGVI+ +N+P + AL GN VV K + TPL+ + + +
Sbjct: 118 RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAA----G 173
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
P + G G A+ D + V+FTGS G V +R +LEL G +
Sbjct: 174 PPQGVLQVVTGDGATGAALI-DAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDP 232
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
+I++ DAD++ A + ++ A+ AGQ C + R+ +HES+Y + +LV + ++ G
Sbjct: 233 MIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGAD 292
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEISPTAD 391
+GP+ T + +++ ++G K LTGG+ G F +PT+ ++ D
Sbjct: 293 DIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMD 352
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+++EE F PVL VM +EA+ + N GLS+S+F+R
Sbjct: 353 VMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRD 393
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 229 bits (587), Expect = 3e-70
Identities = 130/420 (30%), Positives = 206/420 (49%), Gaps = 20/420 (4%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W G T +INP +KI V E D ++ +KA A K+ W + A
Sbjct: 10 FINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDAS 69
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGS 137
+RG ++ ++ D + +L L +++ GK + ++ I + + G + +++G
Sbjct: 70 ERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGK 129
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
IP + + P+GV G I +NFP + W AL CGN VV K A TPL
Sbjct: 130 TIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTA 188
Query: 198 IAITKLVSEV-FER---NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253
+ + L+ E F N +PG G G AI+ P I V+FTGST+VG ++Q
Sbjct: 189 LYLASLIKEAGFPPGVVNVVPGY-------GPTAGAAISSHPDIDKVAFTGSTEVGKLIQ 241
Query: 254 QTV-HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI 312
Q + LEL G + I+ DAD+ AV A GQ C R + ESI
Sbjct: 242 QAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESI 301
Query: 313 YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372
Y + + V+ K+ +G+P + T GP E K + IE+ K +G K+ GG
Sbjct: 302 YDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRH 361
Query: 373 ESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+G F+QPT+ +++ I KEE+F PV + KF+T +E ++ N+ GL++++FT+
Sbjct: 362 GDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTK 421
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 3e-70
Identities = 131/421 (31%), Positives = 208/421 (49%), Gaps = 13/421 (3%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPK 79
F+NG++ A G T +I+P N + IA V E ED + +KA +A W + +
Sbjct: 7 FINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYE 66
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSV 138
R ++ + D L + L L + + GK + EV + + G + +++G
Sbjct: 67 RSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT 126
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+P++ P H + P+GVVG I +NFP + W AL CGN +V K A TPL +
Sbjct: 127 LPADGP-HHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSAL 185
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
KL +E LP + G G G AIA + V+FTGST+VG ++ Q
Sbjct: 186 LAAKLAAEA----GLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAA 241
Query: 258 Q-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + I+ +DAD+ AV FA GQ C R +HESIY
Sbjct: 242 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEF 301
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+++ + +GDP KG GP E + IE+ K +G ++TGG I S+G
Sbjct: 302 VEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKG 361
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
++QPTI ++ I ++E+F PV ++KF+T +E +K N+ GL++ +F+++ +
Sbjct: 362 YYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDT 421
Query: 436 I 436
Sbjct: 422 A 422
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 2e-69
Identities = 129/425 (30%), Positives = 219/425 (51%), Gaps = 20/425 (4%)
Query: 24 FVNGKWK-AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWME-LPAPKRG 81
+NG+WK + G T+ +P++ + I +V S + E + +A + W +P +R
Sbjct: 5 LINGEWKESSGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERI 64
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
+ + + D L+E + LL E+GK L + + EV ID + ++L+G +P
Sbjct: 65 DCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPG 124
Query: 142 ERPNHMMLETWN-----PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPL 195
+ PLGVV I FN+P L + I AL+ GN VV+K A L
Sbjct: 125 DWFPGT-KGKIAQVRREPLGVVLAIGPFNYPLN-LTVSKLIPALIMGNTVVFKPATQGVL 182
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+ I ++E F P + G G EIG + RI ++SFTGST+VG +++
Sbjct: 183 LGI----PLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK 238
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
H + +LEL G + I++ DAD++LA + ++ A+ +GQRCT +R+L+HES+
Sbjct: 239 Q-HPM-KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVAD 296
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++ L + ++K+G P + G + PL P+S E I++ ++G +L GG
Sbjct: 297 ELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE-- 354
Query: 375 EGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
GN + PT+++ ++P + EE F PVL +++ EEA+++ N GL +SIFT+
Sbjct: 355 GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDI 414
Query: 434 ENIFK 438
K
Sbjct: 415 NKARK 419
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 226 bits (579), Expect = 3e-69
Identities = 128/417 (30%), Positives = 203/417 (48%), Gaps = 30/417 (7%)
Query: 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDA 90
G T ++INP + +A V D + + A A S +W L +R V+ ++ D
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 91 LREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMML 149
+ L L +++MGK I +V + + ++ G V P+ P+ + L
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTG-PDALAL 119
Query: 150 ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE--- 206
T PLGVVG + +NFP + W AL GN VV K A +PL + + +L E
Sbjct: 120 ITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGL 179
Query: 207 ---VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK- 262
V N +PG G G+A+ + ++FTGST+VG + Q K
Sbjct: 180 PAGVL--NVVPGF-------GHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKR 230
Query: 263 CLLELSGNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
LE G + I+ DA D+ A + G+ C+ RLL+HESI L+++V
Sbjct: 231 VWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVV 290
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG---IENIKSQGGKILTGGSV--IESEG 376
++ K GDPL+ T +G L S +F+K IE+ K++G +++ GG E+ G
Sbjct: 291 AAAREWKPGDPLDPATRMGAL---VSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGG 347
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
FV+PT+ + ++P I +EE+F PVL V+ F + EEAV + N GL++S++T
Sbjct: 348 FFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSD 404
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 2e-68
Identities = 122/419 (29%), Positives = 205/419 (48%), Gaps = 8/419 (1%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+NG+W +G + NP N K+ +V + ++ + A + A W L A +R
Sbjct: 14 LINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERA 73
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++R+ + + E L RL+++E GK L E GE+ ++ +++ G IP
Sbjct: 74 NILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPG 133
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
+ + ++ P+GV IT +NFP A++ A AL G +V K A TP +A+
Sbjct: 134 HQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALA 193
Query: 202 KLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L R +P +F G A +G + +P + +SFTGST++G + + +
Sbjct: 194 ELA----IRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 249
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL GN I+ DDAD+ AV L + AGQ C RL + + +Y ++L
Sbjct: 250 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 309
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQ 380
++ IGD LEKG +GPL ++ E+ I + +G +++ GG E GNF Q
Sbjct: 310 QQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQ 369
Query: 381 PTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
PTI V++ A + KEE F P+ + +F+ + + N GL++ + R +F+
Sbjct: 370 PTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFR 428
|
Length = 482 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 5e-68
Identities = 130/428 (30%), Positives = 207/428 (48%), Gaps = 24/428 (5%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-----SKIWMELP 76
F+ G+W+ G + +NP + I + A+ ED + ++A +A K W
Sbjct: 11 FIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTT 70
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
R + +R I + E+ L +L +++ GK L E ++ +V ++ L+ L+
Sbjct: 71 GAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDA 130
Query: 137 SVIPSERPNHMMLET------WNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190
+ P + +ET PLGVVG+IT +N+P + W AL G V K +
Sbjct: 131 K---QKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPS 187
Query: 191 PTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG 249
+ + + + EV LP + G G E G +A P + ++FTGST G
Sbjct: 188 ELASVTCLELADICREV----GLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATG 243
Query: 250 LMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ Q LEL G + II+ DD D+ AV +F T GQ C+ RLL+H
Sbjct: 244 RKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVH 303
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
E I L++LV K +KI DPLE+G LGP+ + + K I KS+G IL GG
Sbjct: 304 ERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGG 363
Query: 370 SVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
E +G F++PTI+ +++ + I +EE+F PVL V F T +EA+++ N GL+
Sbjct: 364 KRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAG 423
Query: 427 SIFTRSPE 434
++ + E
Sbjct: 424 AVISNDLE 431
|
Length = 503 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 7e-68
Identities = 130/418 (31%), Positives = 207/418 (49%), Gaps = 13/418 (3%)
Query: 22 GCFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIW-MELPA 77
G F+NG++ HG TV NP + I + EA+ D + ++ A W +++
Sbjct: 8 GLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSG 67
Query: 78 PKRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
KRG + ++ D + L +L + +++ GK +VQ D + G + +++G
Sbjct: 68 SKRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHG 127
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
VI ++ + P+GV G I +NFP + W AL GN +V K + TPL
Sbjct: 128 QVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLS 186
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV-QQ 254
+ +TKL+ E P + G G G AI+ I V+FTGST VG V +
Sbjct: 187 ALYMTKLIPEA----GFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEA 242
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
K LEL G + I+ DDAD++ AV + GQ C R+ + E IY
Sbjct: 243 AAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYD 302
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+ + + K++K+GDP + T GP + + IE+ K++G + TGG +
Sbjct: 303 KFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGN 362
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
EG F++PTI +++ IVKEE+F PV+ V+KF+T EEA+K N GL++++FT
Sbjct: 363 EGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTN 420
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 9e-68
Identities = 128/423 (30%), Positives = 212/423 (50%), Gaps = 22/423 (5%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F+NG+W A G + NPVN + + + ++ ED + + A EA K W + +R
Sbjct: 4 FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA 63
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIP 140
++ +I D + E L L +++ GK + E + ++ ID + G+ R GS+
Sbjct: 64 NILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSE 123
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
+ + + PLGVVG I +NFP + W AL GN VV K A TPL + +
Sbjct: 124 IDE-DTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVL 182
Query: 201 TKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259
+L+ ++ LP + G G+E G+ +A PRI+ ++FTGST VG ++ Q +
Sbjct: 183 MELIGDL-----LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAEN 237
Query: 260 FGKCLLELSGNNAIIIMDDADIKLA--VRSVLFAAVGTA---GQRCTTCRRLLIHESIYQ 314
LEL G + I DDA +G A G+ CT R L+ ESIY
Sbjct: 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYD 297
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++ V+ ++ +K+G+PL+ T++G + + + ++ K +G ++LTGG +
Sbjct: 298 EFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTL 357
Query: 375 ----EGNFVQPTIVEISPTAD--IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+G F +PT+++ D I +EE+F PVL V+ F+ EEA+ I N GL +
Sbjct: 358 GGLDKGYFYEPTLIK-GGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGV 416
Query: 429 FTR 431
+TR
Sbjct: 417 WTR 419
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 218 bits (558), Expect = 4e-66
Identities = 124/439 (28%), Positives = 202/439 (46%), Gaps = 57/439 (12%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+++G W G T+ INP + I TV + D + + A A W +R
Sbjct: 2 YIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERA 61
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKIL--------PEGIGEVQEVIDMC-DFAVGLSR 132
++ +I +A + L + +++EMG + GIG ++ D DF
Sbjct: 62 ALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFE--FEE 119
Query: 133 QLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFP-----CAVLGWNACIALVCGNCVVW 187
+ S++ E P+GV G+IT +N+P V AL G VV
Sbjct: 120 RRGNSLVVRE-----------PIGVCGLITPWNWPLNQIVLKVAP-----ALAAGCTVVL 163
Query: 188 KGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGST 246
K + PL I +++E+ + LP +F G G +G+A++ P + +VSFTGST
Sbjct: 164 KPSEVAPLSAI----ILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGST 219
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
+ G V + + LEL G +A II+DDAD++ AV + A +GQ C R+
Sbjct: 220 RAGKRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRM 279
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK-------GIENIK 359
L+ S Y + + +GDP + T LGPL S F++ GIE
Sbjct: 280 LVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPL---ASAAQFDRVQGYIQKGIE--- 333
Query: 360 SQGGKILTGGS---VIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415
+G +++ GG G FV+PT+ +++P I +EE+F PVL ++ + +EA+
Sbjct: 334 -EGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIA 392
Query: 416 INNSVPQGLSSSIFTRSPE 434
I N P GL+ +++ PE
Sbjct: 393 IANDTPYGLAGYVWSADPE 411
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 217 bits (555), Expect = 1e-65
Identities = 123/420 (29%), Positives = 209/420 (49%), Gaps = 17/420 (4%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
G F+NG+W + G T+ S NP N + ++ + +A+ D + +KA EA K W + +
Sbjct: 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAE 61
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
R ++ +I D + E L + +++ GK + E ++ D + G+ R GS
Sbjct: 62 RANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSA 121
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ + + + P+GVVG I +NFP + W AL GN VV K + TT L +
Sbjct: 122 NMIDE-DTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL 180
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
+ K++ +V LP + G G++ G+ + P + ++FTGST+VG V
Sbjct: 181 ELAKIIQDV-----LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA 235
Query: 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
++ LEL G +A II DDA+ A+ + GQ C R+ + E IY +
Sbjct: 236 KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFV 295
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-- 375
+L + ++ VK+G+PL+ T +G + ++ K +G KILTGG +
Sbjct: 296 AKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGL 355
Query: 376 --GNFVQPTIVEISPTAD--IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
G F++PT++ + T D + +EE+F PV V+KF+T +E + + N GL +FT+
Sbjct: 356 DKGFFIEPTLIV-NVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTK 414
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 217 bits (556), Expect = 1e-65
Identities = 124/419 (29%), Positives = 209/419 (49%), Gaps = 17/419 (4%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+++G + G T INP + +ATV A+ D E + + + KIW + A +R
Sbjct: 10 YIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERS 69
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVI---DMCDFAVGLSRQLNGSV 138
++R+ D LRE+ L L +++ GK + E V +++ D+ ++ GL+ L G
Sbjct: 70 RILRRAVDILRERNDELAALETLDTGKPIQETS--VVDIVTGADVLEYYAGLAPALEGEQ 127
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
IP R + PLGV I A+N+P + W + AL GN +++K + TPL +
Sbjct: 128 IPL-RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTAL 186
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
KL +E++ LP +F G +G + + P I+ VSFTG G V
Sbjct: 187 ---KL-AEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA 242
Query: 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
+ +EL G + +I+ DDAD+ A + A ++GQ CT R+ + +SI
Sbjct: 243 SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEA 302
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----S 374
+L++ ++++IGDP++ T GPL + R IE K++G ++L GG + +
Sbjct: 303 RLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFA 362
Query: 375 EGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
G FV PT+ + + IV+EE+F PV+ V+ F +E + N GL++ +FT
Sbjct: 363 NGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTAD 421
|
Length = 488 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 209 bits (534), Expect = 1e-62
Identities = 116/417 (27%), Positives = 196/417 (47%), Gaps = 15/417 (3%)
Query: 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
G F G + P NP N+ V AS+++ + + + E W + +R
Sbjct: 7 GKFAEGASGTYIPVT---NPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRT 63
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
V+ + L+E + L++ E GK + +G+V +++ + A G++ L G
Sbjct: 64 SVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQ 123
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
+ PLGV IT FNFP + W IA+ CGN V K + P +
Sbjct: 124 VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAV--- 180
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
++E+F P + G E + + P + VSF GST +G + T G
Sbjct: 181 -KLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTG-SAHG 238
Query: 262 KCLLELSG-NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K + L G N +++M DAD A +++ AA G AGQRC ++ + + ++
Sbjct: 239 KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEI 297
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEG 376
+ ++++IG + G +GPL TP+++ I ++G ++L G + EG
Sbjct: 298 RERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEG 357
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
N+V PT++E + PT +EE+F PVL V++ T EEA+ + N+ P G ++IFTR
Sbjct: 358 NWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRD 414
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 206 bits (525), Expect = 3e-61
Identities = 116/435 (26%), Positives = 201/435 (46%), Gaps = 29/435 (6%)
Query: 22 GCFVNGKWKAHGPT--VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAP 78
G F++G+ A + NP Q IA+V A+ D + + + A W +
Sbjct: 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPA 60
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKI--LPEGIGEVQEVIDMCDFAVGLSRQLNG 136
+RG ++ ++ D + + L +L ++ GK L EV + + + G + ++NG
Sbjct: 61 ERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAF-EVGQSANFLRYFAGWATKING 119
Query: 137 SV----IPS---ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKG 189
IPS ER P+GVV I +NF + W AL G +V K
Sbjct: 120 ETLAPSIPSMQGERYTAFTRR--EPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKP 177
Query: 190 APTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
+ TPL + + +L E +P + G +G + P ++ VSFTGS G
Sbjct: 178 SEFTPLTLLRVAELAKEA----GIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATG 233
Query: 250 LMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ + + LEL G NA + DADI V +L A GQ C R +H
Sbjct: 234 KKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVH 293
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK---GIENIKSQGGKIL 366
S + ++ +L ++G P+++ + GPL ++ +F+K +++ +++G +I+
Sbjct: 294 RSKFDELVTKLKQALSSFQVGSPMDESVMFGPL---ANQPHFDKVCSYLDDARAEGDEIV 350
Query: 367 TGGSVIESEGNFVQPTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
GG + EG FVQPT+V +++EE F PV+ + ++ EE +++ N P GL+
Sbjct: 351 RGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLT 410
Query: 426 SSIFTRSPENIFKWL 440
+S++T N+ K L
Sbjct: 411 ASVWT---NNLSKAL 422
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 200 bits (509), Expect = 4e-59
Identities = 118/412 (28%), Positives = 188/412 (45%), Gaps = 8/412 (1%)
Query: 24 FVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+NG+ + G NP + I + EAS E + ++A A W + R E
Sbjct: 5 LINGELVSGEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAE 64
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPS 141
+ ++ D + E L S GK L E+ ++D+ F G +R L+G
Sbjct: 65 CLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGE 124
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
H + +PLGVV I +N+P + W AL GNCVV K + TPL + +
Sbjct: 125 YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLA 184
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
+L ++F G + F G +G + ++ +VS TGS G +
Sbjct: 185 ELAKDIFP----AGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIK 240
Query: 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321
+ +EL G +I+ DDADI V V AGQ CT R+ IY T++++L
Sbjct: 241 RTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLG 300
Query: 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQ 380
+K G P ++ T LGPL + + K +E K+ G K++TGG + G +
Sbjct: 301 AAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFA 360
Query: 381 PTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
PT++ + D IV++E+F PV+ + F E+ V N GL+SS++T+
Sbjct: 361 PTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTK 412
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 1e-58
Identities = 109/389 (28%), Positives = 189/389 (48%), Gaps = 31/389 (7%)
Query: 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMG-------KI 109
D ++ ++A + A W + P +R +++ + D L + + E G
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 110 LPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCA 169
+ G ++E + Q+ G IPS++P + + P+GVV I +N P
Sbjct: 61 VDLAAGMLREAASLIT-------QIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAP-V 112
Query: 170 VLGWNA-CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLP-GA---IFTSFCGG 224
+LG A L GN VV K + +P I VF LP G + S
Sbjct: 113 ILGTRAIAYPLAAGNTVVLKASELSPRTHWLIG----RVFHEAGLPKGVLNVVTHSPEDA 168
Query: 225 AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLA 284
E+ +A+ P + V+FTGST+VG ++ +T + LLEL G I+++DAD+ A
Sbjct: 169 PEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAA 228
Query: 285 VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHT 344
+ LF A +GQ C + R+++HESI +++L +++ G +LG L +
Sbjct: 229 ANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLGSLVS 283
Query: 345 PESRKNFEKGIENIKSQGGKILTGG-SVIESEGNFVQPTIVE-ISPTADIVKEELFAPVL 402
+ ++ +++ S+G K++ GG + G + PTI++ ++P DI EE F PV+
Sbjct: 284 AAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVV 343
Query: 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+++ + EEAV+I N GLS+++FTR
Sbjct: 344 SIIRVKDEEEAVRIANDSEYGLSAAVFTR 372
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 2e-58
Identities = 122/415 (29%), Positives = 202/415 (48%), Gaps = 9/415 (2%)
Query: 24 FVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
F++GKW+A G + SS NP + + AS E + A A W L +R
Sbjct: 2 FIDGKWRAGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIA 61
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
VV++ L E+ L R+++ E GK L E EV +I ++ + G +
Sbjct: 62 VVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGES-ENP 120
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202
P+ + P GVV V +NFP + + AL+ GN VV+K + TP + K
Sbjct: 121 MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVK 180
Query: 203 LVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
L +E+ LP + G E G A+A P I + FTGS+ G ++ + R K
Sbjct: 181 L----WEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEK 236
Query: 263 CL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY-QTVLDQL 320
L LE+ GNN +I+ + ADI AV ++ +A +AGQRCT RRLL+ + L +L
Sbjct: 237 ILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARL 296
Query: 321 VDVYKQVKIGD-PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFV 379
V+V +++ +G E +G + + ++ + + + GGK L ++ +
Sbjct: 297 VEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALL 356
Query: 380 QPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
P I++++ A++ EE F P+L V+++ F+EA+ I N+ GLS+ + + E
Sbjct: 357 TPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRE 411
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 2e-58
Identities = 119/417 (28%), Positives = 206/417 (49%), Gaps = 13/417 (3%)
Query: 24 FVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
++NG W A G S NPV+ + + +A+ + ++A A W L +R
Sbjct: 4 WINGDWIAGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQA 63
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE 142
+V + L E L +++ E GK L E EV +I+ ++ + G SE
Sbjct: 64 IVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKR-SE 122
Query: 143 RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI--ALVCGNCVVWKGAPTTPLITIAI 200
+ + P GVV V +NFP L N I AL+ GN VV+K + TP +
Sbjct: 123 MADGAAVLRHRPHGVVAVFGPYNFP-GHLP-NGHIVPALLAGNTVVFKPSELTP----WV 176
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L +++++ LP + GG E G+A+A P I + FTGS G ++ + +
Sbjct: 177 AELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236
Query: 261 GKCL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY-QTVLD 318
K L LE+ GNN ++I + ADI AV ++ +A +AGQRCT RRLL+ + L
Sbjct: 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLA 296
Query: 319 QLVDVYKQVKIGDPL-EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN 377
+LV V K++ +G E +G + + ++ + + + GGK L + +++
Sbjct: 297 RLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTG 356
Query: 378 FVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
+ P I++++ A++ EE F P+L V+++ F+EA+++ N+ GLS+ + + E
Sbjct: 357 LLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDRE 413
|
Length = 487 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 1e-57
Identities = 108/403 (26%), Positives = 185/403 (45%), Gaps = 19/403 (4%)
Query: 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98
P + + + +++ D E A + W P +R V + D + E+ L
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60
Query: 99 GRLLSIEMGKILPEGIGEVQEVIDMCDF-AVGLSRQLNGSVIPSERPNHMML-----ETW 152
L+ +E GK EV +V + + A R L P R + +
Sbjct: 61 LDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLK----PRRRRGAIPVLTRTTVNR 116
Query: 153 NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
P GVVGVI+ +N+P + +A AL+ GN VV K T L + +L+
Sbjct: 117 RPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELL----IEAG 172
Query: 213 LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271
LP ++ G G+E+G AI V FTGST G +V + +R C LEL G N
Sbjct: 173 LPRDLWQVVTGPGSEVGGAIVD--NADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKN 230
Query: 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331
+I+++DAD+ A + A AGQ C + R+ +HES+Y + + V + +++G
Sbjct: 231 PMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGA 290
Query: 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN-FVQPTIVE-ISPT 389
L+ G +G L + +++ ++G +L GG G F +PT++ ++
Sbjct: 291 ALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTED 350
Query: 390 ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
++ EE F PV+ + + +EA+++ N GL++S++TR
Sbjct: 351 MELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRD 393
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 1e-57
Identities = 131/431 (30%), Positives = 203/431 (47%), Gaps = 25/431 (5%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F+ G+W A G +I PV + V ++ ED E + A A + W + +R
Sbjct: 4 FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERA 63
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIP 140
++ +I D + L L + + GK + E + ++ ID + G R GS+
Sbjct: 64 NILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI-- 121
Query: 141 SE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
SE N + PLGVVG I +NFP + W AL GNCVV K A TP +
Sbjct: 122 SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV 181
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+ +L+ ++ LP + G G E G+ +A RI+ V+FTG T G ++ Q +
Sbjct: 182 LMELIGDL-----LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE 236
Query: 259 RFGKCLLELSGNNAII----IM--DDADIKLAVRS-VLFAAVGTAGQRCTTCRRLLIHES 311
LEL G + I +M DDA A+ V+FA G+ CT R LI ES
Sbjct: 237 NIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL--NQGEVCTCPSRALIQES 294
Query: 312 IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
IY +++ ++ K +K G+PL+ T++G + E + I+ K +G ++LTGG
Sbjct: 295 IYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGER 354
Query: 372 IESEGN----FVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
E G + PT + I +EE+F PVL V F+ EEA++I N GL +
Sbjct: 355 NELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAG 414
Query: 428 IFTRSPENIFK 438
++TR ++
Sbjct: 415 VWTRDGNTAYR 425
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 201 bits (514), Expect = 1e-57
Identities = 130/425 (30%), Positives = 208/425 (48%), Gaps = 25/425 (5%)
Query: 25 VNGKWKAHGPTVSSINPVNNQKI-ATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
VNG A G INP + I TV EA+ D E+ ++A A+ IW P +R +
Sbjct: 118 VNGAPVAGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAI 177
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143
+ + D + ++ L LL E GK L I EV+E +D + G +R G+
Sbjct: 178 LERAADLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------ 231
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203
T PLG V I+ +NFP A+ AL GN V+ K A TPLI +L
Sbjct: 232 ------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRL 285
Query: 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
+ E +P + G G +G A+ D R++ V FTGST+V ++Q+ + +R G+
Sbjct: 286 LHEA----GVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGR 341
Query: 263 ---CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319
+ E G NA+I+ A + V VL +A +AGQRC+ R L + E + +L
Sbjct: 342 PIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTM 401
Query: 320 LVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-GNF 378
L ++++G+P T +GP+ E++ N EK I+ ++S+G + + + G F
Sbjct: 402 LKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTF 461
Query: 379 VQPTIVEISPTADIVKEELFAPVLYVMKF--QTFEEAVKINNSVPQGLSSSIFTRSPENI 436
V PT++E+ D ++ E+F PVL+V+++ +E + N+ GL+ + TR E I
Sbjct: 462 VAPTLIEL-ENLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETI 520
Query: 437 FKWLG 441
Sbjct: 521 AHVTE 525
|
Length = 769 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 195 bits (496), Expect = 5e-57
Identities = 123/430 (28%), Positives = 209/430 (48%), Gaps = 33/430 (7%)
Query: 23 CFVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAP 78
F+NG++ G T ++INP + I V A++ED + + A EA + W ++ A
Sbjct: 8 LFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNAR 67
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGS 137
RG ++ ++ D + E L + S++ G + + V I + G ++ G
Sbjct: 68 DRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGK 127
Query: 138 VIP--SERPNHMMLETW-NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194
IP RPN + T P+GV G++ +N+P +L W L GN VV K A TP
Sbjct: 128 TIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTP 187
Query: 195 LITIAITKLVSEV-FER---NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250
L + +L + F + N LPG+ G+ +GQ ++ P + + FTGST +G
Sbjct: 188 LTALKFAELTVKAGFPKGVINILPGS-------GSLVGQRLSDHPDVRKLGFTGSTPIGK 240
Query: 251 MVQQT-VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ ++ K LEL G + +II D D+ AVR + + G+ C RL +
Sbjct: 241 HIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVE 300
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIK---SQGGKIL 366
ESI+ + ++V+ K++KIGDPL++ T GP + + +K +E + +G ++
Sbjct: 301 ESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGP---QNHKAHLDKLVEYCERGVKEGATLV 357
Query: 367 TGGSVIESEGNFVQPTIVEISPTAD---IVKEELFAPVLYVMKFQT--FEEAVKINNSVP 421
GG ++ G F +PT+ + D I KEE F P++ + KF + ++ N
Sbjct: 358 YGGKQVDRPGFFFEPTV--FTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTE 415
Query: 422 QGLSSSIFTR 431
GL+S +FT+
Sbjct: 416 YGLASGVFTK 425
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 1e-56
Identities = 122/417 (29%), Positives = 199/417 (47%), Gaps = 13/417 (3%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+NG++ A G T + +P + IA + E ED + +KA EA W + +
Sbjct: 24 FINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFE 83
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSV 138
RG ++ + D + E + L L +I+ GK+ G ++ + + G + +++G
Sbjct: 84 RGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGET 143
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ R P+GVVG I +NFP + AL G +V K A TPL +
Sbjct: 144 LKMSRQLQGYTLK-EPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSAL 202
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG-LMVQQTV 256
L + +P + G G G AIA + VSFTGST+VG ++Q
Sbjct: 203 FYAHLA----KLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAA 258
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ LEL G + ++I DDAD+ +AV L G+ C R+ + E IY
Sbjct: 259 TSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEF 318
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+ +LV+ K +GDP + GP + + IE+ K +G +LTGG +G
Sbjct: 319 VKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKG 378
Query: 377 NFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+++PTI +++ I ++E+F PV+ +MKF+T EEA+K N+ GL++ I T+
Sbjct: 379 YYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKD 435
|
Length = 501 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 200 bits (512), Expect = 2e-56
Identities = 128/424 (30%), Positives = 202/424 (47%), Gaps = 45/424 (10%)
Query: 24 FVNGKWKAHGPTVSSI-------NPVNN-QKIATVVEASLEDYEEGMKACSEASKIWMEL 75
F+ +W+A GP ++ +P + + + V A E E+ + A A W
Sbjct: 546 FLEKQWQA-GPIINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRT 604
Query: 76 PAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN 135
P +R ++ + D L L L E GK L + I EV+E +D C + +R+L
Sbjct: 605 PVEERAAILERAADLLEANRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLF 664
Query: 136 GSVIPSERP----NHMMLETWNPLGVVGVITAFNFPCAV-LGWNACIALVCGNCVVWKGA 190
G+ P N + L GV I+ +NFP A+ LG A AL GN V+ K A
Sbjct: 665 GAPEKLPGPTGESNELRLH---GRGVFVCISPWNFPLAIFLGQVAA-ALAAGNTVIAKPA 720
Query: 191 PTTPLITIAITKLVSEV--------FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
TPLI KL+ E LPG GA +G A+ DPRI+ V+F
Sbjct: 721 EQTPLIAAEAVKLLHEAGIPKDVLQL----LPGD-------GATVGAALTADPRIAGVAF 769
Query: 243 TGSTKVGLMVQQTVHQRFGK--CLL-ELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQR 299
TGST+ ++ +T+ R G L+ E G NA+I+ A + V V+ +A +AGQR
Sbjct: 770 TGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQR 829
Query: 300 CTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIK 359
C+ R L + E I V++ L ++K+GDP T +GP+ E++ N + IE +K
Sbjct: 830 CSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMK 889
Query: 360 SQGGKILTGGSVIESE-GNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFE-EAV--K 415
+ + +E G+FV PT EI + ++ E+F P+L+V++++ + + V
Sbjct: 890 REARLLAQLPLPAGTENGHFVAPTAFEI-DSISQLEREVFGPILHVIRYKASDLDKVIDA 948
Query: 416 INNS 419
IN +
Sbjct: 949 INAT 952
|
Length = 1038 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 2e-54
Identities = 122/421 (28%), Positives = 195/421 (46%), Gaps = 25/421 (5%)
Query: 25 VNGKWKAHGPTVSSINPVNNQ-KIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+ +KA G NP + + + V A+L + + + +A W PA +R
Sbjct: 42 IGHSYKADGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAK 101
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143
+ ++ D L + L L E GK + I EV+E +D C + R + G
Sbjct: 102 LDRLADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------ 155
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203
+ GV I+ +NFP A+ AL GN V+ K A T LI +
Sbjct: 156 ------FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIA---YRA 206
Query: 204 VSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF--- 260
V + E G I GA++G A+ DPRI+ V+FTGST+V ++ QT+ QR
Sbjct: 207 VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAP 266
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
+ E G NA+I+ A + VR VL +A +AGQRC+ R L + E + VL +
Sbjct: 267 VPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMI 326
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI--LTGGSVIESE-GN 377
+++K+G P T +GP+ E+++N IE++ KI LT + G
Sbjct: 327 QGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGT 386
Query: 378 FVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN--NSVPQGLSSSIFTRSPEN 435
FV PT+ E+ A++ EE+F PVL+V++++ E ++ N GL+ + +R
Sbjct: 387 FVAPTLFELDDIAEL-SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETT 445
Query: 436 I 436
Sbjct: 446 Y 446
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 3e-54
Identities = 108/395 (27%), Positives = 195/395 (49%), Gaps = 8/395 (2%)
Query: 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97
S+NP ++++ + A +D E ++ + + W E R + +R IG ALR +
Sbjct: 11 SVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEE 70
Query: 98 LGRLLSIEMGKILPEGIGEVQEVIDMCD-FAVGLSRQLNGSVIPSERPNHMMLETWNPLG 156
+ ++++ EMGK + + EV + ++CD +A L P+ N + + PLG
Sbjct: 71 MAQMITREMGKPINQARAEVAKSANLCDWYAEHGPAMLKAE--PTLVENQQAVIEYRPLG 128
Query: 157 VVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216
+ I +NFP + A L+ GN + K AP + +L+++VF+ +P
Sbjct: 129 TILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNV----MGCAQLIAQVFKDAGIPQG 184
Query: 217 IFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276
++ + + D RI+ V+ TGS + G + KC+LEL G++ I++
Sbjct: 185 VYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL 244
Query: 277 DDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336
+DAD++LAV++ + GQ C +R +I E I ++ V +K+GDP ++
Sbjct: 245 NDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEE 304
Query: 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKE 395
LGP+ + R +E ++G ++L GG I GN+ PT++ ++P +E
Sbjct: 305 NALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFRE 364
Query: 396 ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
ELF PV + + E A+++ N GLS++IFT
Sbjct: 365 ELFGPVAAITVAKDAEHALELANDSEFGLSATIFT 399
|
Length = 462 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 4e-54
Identities = 131/433 (30%), Positives = 196/433 (45%), Gaps = 32/433 (7%)
Query: 24 FVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIW---MELPA 77
++GK T ++NP + + +A+ D + + A A W L
Sbjct: 4 LIDGKLVAGSAGTFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTAL-- 61
Query: 78 PKRGEVVRQIGDALREKLHHLGRLLSIEMG--KILPEGIGEVQEVIDMCDFAVGLS---- 131
R +RQ+ DALR + L L E+G ++L G +++ +D FA L+
Sbjct: 62 --RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAG-AQLEGPVDDLGFAADLAESYA 118
Query: 132 -RQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFP----CAVLGWNACIALVCGNCVV 186
G P P L +GVVG IT +NFP A LG AL GN VV
Sbjct: 119 WTTDLGVASPMGIPTRRTLRR-EAVGVVGAITPWNFPHQINLAKLG----PALAAGNTVV 173
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
K AP TP + +L++E + PG + +G +AKDPR+ +VSFTGST
Sbjct: 174 LKPAPDTPWCAAVLGELIAE--HTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGST 231
Query: 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL 306
G V K LEL G +A I++DDAD+ A F AGQ C RL
Sbjct: 232 ATGRAVMADAAATLKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRL 291
Query: 307 LIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366
++ + Y + +K GDP + GT+ GP+ + R + ++ ++GG+
Sbjct: 292 VVPRARYDEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFA 351
Query: 367 TGGSVIESE--GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
GG G FV+PT++ + A + +EE+F PVL V+ ++AV+I N P G
Sbjct: 352 CGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYG 411
Query: 424 LSSSIFTRSPENI 436
LS ++F PE
Sbjct: 412 LSGTVFGADPERA 424
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 4e-54
Identities = 129/386 (33%), Positives = 191/386 (49%), Gaps = 27/386 (6%)
Query: 30 KAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIG 88
G T +NP + + + TV EAS ED E + A A W PA +R ++ +
Sbjct: 563 DVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAA 622
Query: 89 DALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF-AVGLSRQLNGSVIPSERPNHM 147
D + + L L E GK L I EV+E +D + A R LNG
Sbjct: 623 DLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLNGPGHK------- 675
Query: 148 MLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207
PLG V I+ +NFP A+ ALV GN V+ K A TPLI +L+ E
Sbjct: 676 ------PLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEA 729
Query: 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK--CL 264
+P G G +G A+ DPRI+ V FTGST+V ++Q+T+ +R G L
Sbjct: 730 ----GVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPL 785
Query: 265 L-ELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
+ E G NA+I+ A + V V+ +A +AGQRC+ R L + E + VL L
Sbjct: 786 IAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGA 845
Query: 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI--LTGGSVIESEGNFVQP 381
+++IGDP T +GP+ E++ N E IE +++ G + L + E +G FV P
Sbjct: 846 MDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETE-KGTFVAP 904
Query: 382 TIVEISPTADIVKEELFAPVLYVMKF 407
T++EI +D+ + E+F PVL+V++F
Sbjct: 905 TLIEIDSISDL-EREVFGPVLHVVRF 929
|
Length = 1208 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 188 bits (479), Expect = 4e-54
Identities = 114/414 (27%), Positives = 184/414 (44%), Gaps = 25/414 (6%)
Query: 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR 92
GPT P + +ATV ++ D E A + W P +R V+ + D +
Sbjct: 31 GPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVL 90
Query: 93 EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF----AVGLSRQLNGSVIPSERPNHMM 148
E L L+ +E GK EV +V + A L P R +
Sbjct: 91 ENREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLA-------PRRRAGALP 143
Query: 149 L-----ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203
+ E P GVVGVI+ +N+P + +A AL+ GN VV K TPL +A
Sbjct: 144 VLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALA---- 199
Query: 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
E+ LP ++ G G +G A+ + FTGST G ++ + +R
Sbjct: 200 AVELLYEAGLPRDLWQVVTGPGPVVGTALV--DNADYLMFTGSTATGRVLAEQAGRRLIG 257
Query: 263 CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LEL G N +I++DDAD+ A + A AGQ C + R+ +HESIY + V
Sbjct: 258 FSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVA 317
Query: 323 VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN-FVQP 381
+ +++G + +G L + + +++ ++G +L GG G F +P
Sbjct: 318 AVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEP 377
Query: 382 TIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
T++ ++P ++ +EE F PV+ V +EAV+ N P GL++S++T
Sbjct: 378 TVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTA 431
|
Length = 524 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 2e-53
Identities = 124/423 (29%), Positives = 202/423 (47%), Gaps = 27/423 (6%)
Query: 24 FVNGKW--KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
+NG++ A G T +++P + IA V E ED + A +A W ++ A +
Sbjct: 61 LINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYE 120
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSV 138
R ++ + D L + L L + + GK + E+ + + G + +++G
Sbjct: 121 RSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLT 180
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+P++ P+H+ P+GV G I +NFP + W AL CGN +V K A TPL +
Sbjct: 181 VPADGPHHVQT-LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 239
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
KL+ E LP + G G G A+A + ++FTGST G +V +
Sbjct: 240 YAAKLLHEA----GLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAA 295
Query: 258 QRFGKCL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ K + LEL G + I+ +DAD+ AV FA GQ C R +HE +Y
Sbjct: 296 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY--- 352
Query: 317 LDQLVDVYK----QVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS---QGGKILTGG 369
D+ V+ K + +GDP +KG GP E FEK + IKS G + GG
Sbjct: 353 -DEFVEKAKARALKRVVGDPFKKGVEQGPQIDSE---QFEKILRYIKSGVESGATLECGG 408
Query: 370 SVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
S+G ++QPT+ + I ++E+F PV ++KF+ +E ++ N+ GL++ +
Sbjct: 409 DRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGV 468
Query: 429 FTR 431
FT+
Sbjct: 469 FTQ 471
|
Length = 538 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 2e-52
Identities = 106/413 (25%), Positives = 195/413 (47%), Gaps = 19/413 (4%)
Query: 35 TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94
+ P N + TV +AS++D A + A+ L +R ++ + L +
Sbjct: 18 VIEVRYPYNGTVVGTVPKASVDDVRR---AFAIAAAYRPTLTRYERSAILDRAAALLAAR 74
Query: 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI-----PSERPNHMML 149
+ L+++E G + + EV V D+ FA + + +G + P + +
Sbjct: 75 KEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFT 134
Query: 150 ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFE 209
+ LGV+ IT FN P + A+ N +V K + TPL + + ++ E
Sbjct: 135 QREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEA-- 192
Query: 210 RNKLPGAIFTSFCGG-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
LP + G EI + +P + LV+FTG +G + R + +LEL
Sbjct: 193 --GLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAGYR--RQVLELG 248
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
GN+ +I+M+DAD+ A + + +GQRCT +R+L+ ES+ + LV+ + +
Sbjct: 249 GNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWR 308
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-IS 387
GDP++ +G + + FE + +QG ++L G +G PT+++ +
Sbjct: 309 YGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNV---RDGALYAPTVLDRVD 365
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440
P+ +V+EE F PV V++F ++A++I+NS GLSS + T + I +++
Sbjct: 366 PSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFI 418
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 2e-49
Identities = 105/416 (25%), Positives = 181/416 (43%), Gaps = 37/416 (8%)
Query: 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95
+++INP + + T + ++ + + + + +R D L +
Sbjct: 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEA 62
Query: 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDF-----------------AVGLSRQLNGSV 138
+ L+++EMGK L E + + AVG SR
Sbjct: 63 DQVAALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADEPADAAAVGASR------ 116
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ PLGVV + +NFP + A AL+ GN + K A P +
Sbjct: 117 ---------AYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTAL 167
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+ +++F R P F + G+ +AI +DPR++ + TGS G V
Sbjct: 168 YL----ADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD 223
Query: 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
K +LEL G++ I+M AD+ A + + A V GQ C +R ++H +Y +
Sbjct: 224 EIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAE 283
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
+ V +++GDP + T +GPL T + R EK +++ + G IL GG + G F
Sbjct: 284 KFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWF 343
Query: 379 VQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
PT++ +I+P + EE+F PV + + +EA++I N+ GL S+ +TR
Sbjct: 344 YPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDE 399
|
Length = 457 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 174 bits (442), Expect = 3e-49
Identities = 115/433 (26%), Positives = 192/433 (44%), Gaps = 41/433 (9%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGE 82
F+NG + G T ++INPV+ + IA V EA + + + A A K W ++ +R +
Sbjct: 4 FINGAFVESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERAD 63
Query: 83 VVRQIGDALREKLHHL--------GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQL 134
++ + D + + G+ S+ +P G + D + +
Sbjct: 64 LLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFAD-------VVKNA 116
Query: 135 NGSVIPSERPN---HMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191
P+ + PLGVVGVI+ +N P ++ W AL CGN VV K +
Sbjct: 117 PTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSE 176
Query: 192 TTPLITIAITKLVSEVFERNKLPGAIFT---SFCGGAEIGQAIAKDPRISLVSFTGSTKV 248
TP L+ EV +P ++ F G G+ + + P + ++FTG T+
Sbjct: 177 ETP----GTATLLGEVMNAVGVPKGVYNVVHGF-GPDSAGEFLTRHPGVDAITFTGETRT 231
Query: 249 GLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
G + + EL G NA I+ D D AV +L +A GQ C R+ +
Sbjct: 232 GSAIMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYV 291
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN----FEKGIENIKSQGGK 364
I+ + L + +KIG P + T +GPL + E R + +E +G
Sbjct: 292 ERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVE----EGAT 347
Query: 365 ILTGGSVIE-----SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418
++TGG V + + G +VQPTI + +A +V EE+F P ++ F + EE + + N
Sbjct: 348 VVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALAN 407
Query: 419 SVPQGLSSSIFTR 431
P GL++S++T
Sbjct: 408 DTPYGLAASVWTE 420
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 1e-46
Identities = 116/436 (26%), Positives = 200/436 (45%), Gaps = 43/436 (9%)
Query: 23 CFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+ GK G T + P + +AT A E+ ++A EA K W +P R
Sbjct: 35 LVIGGKEVRTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRA 94
Query: 82 EVVRQIGDALREKLHHLGRLLSIEM---GKILPEG-IGEVQEVIDMCDFAVGLSRQLNGS 137
+ + D L K + L + M GK + + I E+ID F V + +L
Sbjct: 95 AIFLKAADLLSGKYRY--ELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYA- 151
Query: 138 VIPSERPNHMMLETWN-----PL-GVVGVITAFNFPCAVLGWN--ACIALVCGNCVVWKG 189
++P WN PL G V ++ FNF +G N AL+ GN V+WK
Sbjct: 152 ----QQPLSSPAGVWNRLEYRPLEGFVYAVSPFNF--TAIGGNLAGAPALM-GNVVLWKP 204
Query: 190 APTTPLITIAITKLVSEVFERNKLP-GAIFTSF--CGGAEIGQAIAKDPRISLVSFTGST 246
+ T + LV ++ E LP G I +F G +G + P ++ + FTGST
Sbjct: 205 SDTA----VLSNYLVYKILEEAGLPPGVI--NFVPGDGPVVGDTVLASPHLAGLHFTGST 258
Query: 247 KVGLMVQQTVHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
+ + + + + + + E G N ++ AD+ V + + A GQ+C
Sbjct: 259 PTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKC 318
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
+ R + ES++ V ++L++ K++K+GDP + +G + ++ + I++ KS
Sbjct: 319 SAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKS 378
Query: 361 QGG-KILTGGSVIESEGNFVQPTIVEIS-PTADIVKEELFAPVL--YVMKFQTFEEAVK- 415
+I+ GG +S G FV+PT++E + P ++ EE+F PVL YV FEE ++
Sbjct: 379 DPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLEL 438
Query: 416 INNSVPQGLSSSIFTR 431
++ + P L+ +IF +
Sbjct: 439 VDTTSPYALTGAIFAQ 454
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 1e-46
Identities = 103/394 (26%), Positives = 180/394 (45%), Gaps = 16/394 (4%)
Query: 48 ATVVEASLEDYEEGMKACSEASKIWME----LPAPKRGEVVRQIGDALREKLHHLGRLLS 103
+ E D+ KA A ++++ LPA +R ++ ++ D + E+ L L++
Sbjct: 10 KPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIA 69
Query: 104 IEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP----SERPNHMMLETWNPLGVVG 159
E GK L + EV ID + A QL G IP + T P+GVV
Sbjct: 70 REGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVV 129
Query: 160 VITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFT 219
I+AFN P ++ A+ G V+ K A TPL +A L+ E LP
Sbjct: 130 AISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA----GLPEGWCQ 185
Query: 220 SFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDA 279
+ + + + DPR++ SF GS +VG M++ + +C LE G +I+ A
Sbjct: 186 AVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-TRCALEHGGAAPVIVDRSA 244
Query: 280 DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339
D+ + ++ AGQ C + +R+ + I +L +++ +GDP + T +
Sbjct: 245 DLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEV 304
Query: 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELF 398
GPL P E+ + + G ++L GG + S+ + PT++ + A + +E+F
Sbjct: 305 GPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL-SDTTY-APTVLLDPPRDAKVSTQEIF 362
Query: 399 APVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
PV+ V + +EA+ NS+P +++FT+
Sbjct: 363 GPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKD 396
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 6e-46
Identities = 123/425 (28%), Positives = 202/425 (47%), Gaps = 42/425 (9%)
Query: 31 AHGPTVSSINPVNNQKI-ATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGD 89
A G INP + + I V EA+ + E+ +++ A+ IW P +R ++ + D
Sbjct: 656 AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAAD 715
Query: 90 ALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMML 149
+ ++ L LL E GK I EV+E +D + G R + N
Sbjct: 716 LMEAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRD--------DFDN---- 763
Query: 150 ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE--- 206
+T PLG V I+ +NFP A+ AL GN V+ K A TPLI +++ E
Sbjct: 764 DTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGV 823
Query: 207 ---VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF--- 260
V + LPG G +G A+ D R+ V FTGST+V ++Q+ + R
Sbjct: 824 PAGVVQL--LPGR-------GETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQ 874
Query: 261 GKC---LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
G+ + E G NA+I+ A + V VL +A +AGQRC+ R L + + + L
Sbjct: 875 GRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTL 934
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT---GGSVIES 374
L + ++G+P T +GP+ E++ N E+ I+ ++++G + S
Sbjct: 935 KMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQ 994
Query: 375 EGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFE-EAV--KINNSVPQGLSSSIFTR 431
G FV PT++E+ ++ K E+F PVL+V+++ + + + +IN S GL+ + TR
Sbjct: 995 SGTFVPPTLIELDSFDEL-KREVFGPVLHVVRYNRNQLDELIEQINAS-GYGLTLGVHTR 1052
Query: 432 SPENI 436
E I
Sbjct: 1053 IDETI 1057
|
Length = 1318 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 1e-43
Identities = 104/406 (25%), Positives = 188/406 (46%), Gaps = 17/406 (4%)
Query: 40 NPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99
+P Q + +V + ED +E + A A + W + +R +V+R + + E +
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEIC 61
Query: 100 RLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLET------W 152
R+ + GK + + +GE+ + + + ++ P RP +++ +
Sbjct: 62 RVACRDTGKTMVDASLGEILVTCEKIRW---TLKHGEKALRPESRPGGLLMFYKRARVEY 118
Query: 153 NPLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
PLGVVG I ++N+P L I AL GN +V K + + ++ E
Sbjct: 119 EPLGVVGAIVSWNYPFHNL-LGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAAC 177
Query: 212 KLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271
+ E +A+ P I ++F GS VG V + +LEL G +
Sbjct: 178 GHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKD 237
Query: 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331
I++DDAD+ ++ ++GQ C R+++HE IY +L+ L D + ++ G
Sbjct: 238 PAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGP 297
Query: 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS----VIESEGNFVQPTI-VEI 386
PL+ +G + +P E+ + + +G ++L GG +G++ PT+ V++
Sbjct: 298 PLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDV 357
Query: 387 SPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+P I +EE+F PV+ VMK EEAV+I NS GL +S+F +
Sbjct: 358 TPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKD 403
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 156 bits (395), Expect = 3e-42
Identities = 123/449 (27%), Positives = 204/449 (45%), Gaps = 30/449 (6%)
Query: 11 LSEIGLSPETPGCFVNGK--WKAHGPTVSSINPVNNQ-KIATVVEASLEDYEEGMKACSE 67
L E+ E + G+ W + G + ++P N+Q +A A+ E + ++A +
Sbjct: 22 LKELKGRMEEIPLVIGGEEVWTS-GERIYQVSPHNHQAVLAKATNATEELANKAVEAALD 80
Query: 68 ASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEM---GKILPEG-IGEVQEVIDM 123
A K W LP R + + D L +L+ M K + + I V E+ID
Sbjct: 81 AKKEWSLLPFYDRAAIFLKAADLLSGPYRA--EILAATMLGQSKTVYQAEIDAVAELIDF 138
Query: 124 CDFAVGLSRQLNGSVIPSERPNHMMLETWNPL-GVVGVITAFNFPCAVLGWNACIALVCG 182
F +R+L P P + PL G V I+ FNF A+ G A + G
Sbjct: 139 FRFNAKYARELYEQQ-PISAPGEWNRTEYRPLEGFVYAISPFNF-TAIAGNLAGAPALMG 196
Query: 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLP-GAIFTSFCGGAEIGQAIAKDPRISLVS 241
N V+WK + T L + +++ E LP G I G + + DP ++ +
Sbjct: 197 NTVIWKPSDTAMLSNYLVMRILEEA----GLPPGVINFVPGDGPLVSDTVLADPDLAGIH 252
Query: 242 FTGSTKVGLMVQQTVHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295
FTGST + + V Q F + + E G + ++ AD++ V + A
Sbjct: 253 FTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEY 312
Query: 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355
GQ+C+ C RL + S++ +L+ +VK+GDP + GT +G + +S K I
Sbjct: 313 QGQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYI 372
Query: 356 ENIKSQGG--KILTGGSVIESEGNFVQPTIVEIS-PTADIVKEELFAPVL--YVMKFQTF 410
E+ KS IL GG +S G FV+PT+VE P ++KEE+F PVL YV +
Sbjct: 373 EHAKSDPSALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKY 432
Query: 411 EEAVK-INNSVPQGLSSSIFTRSPENIFK 438
+E + ++++ GL+ ++F + + I +
Sbjct: 433 KEILDLVDSTTSYGLTGAVFAKDRDAILE 461
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 156 bits (394), Expect = 1e-41
Identities = 110/426 (25%), Positives = 197/426 (46%), Gaps = 17/426 (3%)
Query: 16 LSPETP----GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI 71
+ P P G FV + + + INP + ++ V + E+++ + A +A +
Sbjct: 110 MPPRVPNLIGGSFVESQSSSF---IDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPL 166
Query: 72 WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS 131
W P R V+ + + +R+ + L ++ E GK L + G++ +++ + A G++
Sbjct: 167 WRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMA 226
Query: 132 RQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191
G +P+ PLGV I FNFP + W +A+ CGN + K +
Sbjct: 227 TLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSE 286
Query: 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLM 251
P ++ + +L E LP + G + AI D I VSF GS G+
Sbjct: 287 KDPGASVILAELAMEA----GLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMH 342
Query: 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES 311
+ + + + N +++ DA+I + ++L A G AGQRC ++
Sbjct: 343 IYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD 402
Query: 312 IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
++ D+LV+ K +K+ E LGP+ + ++++ + I++ G K+L G
Sbjct: 403 A-KSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRD 461
Query: 372 I----ESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
I +GNF+ PTI+ ++P + KEE+F PVL M+ +F+EA+ I N G +
Sbjct: 462 IVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGA 521
Query: 427 SIFTRS 432
+IFT S
Sbjct: 522 AIFTSS 527
|
Length = 604 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 1e-39
Identities = 106/418 (25%), Positives = 184/418 (44%), Gaps = 16/418 (3%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+NG++ A T +++PV +A + D + + A W K
Sbjct: 23 FINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAK 82
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSV 138
R V+ ++ D + L L +++ GK + + ++ + ++ G V
Sbjct: 83 RKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEV 142
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ + + + P+GV+ I +NFP + W AL GN V+ K + +PL I
Sbjct: 143 ATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAI 201
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG-LMVQQTV 256
+ L E LP + G G E GQA+++ I ++FTGST+ G +++
Sbjct: 202 RLAGLAKEA----GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAG 257
Query: 257 HQRFGKCLLELSGNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ LE G +A I+ D D++ A + GQ C RLL+ ESI
Sbjct: 258 DSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADE 317
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
L L + + G PL+ T +G L + I +S+G +L G +
Sbjct: 318 FLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRN--AGL 375
Query: 376 GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+ PTI V++ P A + +EE+F PVL V +F + E+A+++ N GL ++++TR
Sbjct: 376 AAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRD 433
|
Length = 494 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 144 bits (365), Expect = 1e-38
Identities = 78/285 (27%), Positives = 143/285 (50%), Gaps = 16/285 (5%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGVV +I +N+P L I A+ GN VV K + P + + KL+ + F
Sbjct: 100 PLGVVLIIGPWNYP-LQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYF---- 154
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
GG E+ A+ +P + FTGS VG +V + + LEL G +
Sbjct: 155 -DPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSP 212
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I+ DA++++A R + + AGQ C +L+HESI ++++L K+ G+
Sbjct: 213 CIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEF-YGED 271
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTAD 391
++ G + + ++F++ + GK++ GG V + E ++ PTI++ +SP +
Sbjct: 272 PKESPDYGRI---INERHFDRLASLL--DDGKVVIGGQVDKEE-RYIAPTILDDVSPDSP 325
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
+++EE+F P+L ++ + +EA++ NS P+ L+ +F+
Sbjct: 326 LMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQ 370
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 7e-38
Identities = 118/443 (26%), Positives = 202/443 (45%), Gaps = 39/443 (8%)
Query: 9 EFLSEIGLSPETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACS 66
F +EI L + + +G+W+ + G +V+ NP + V + E+ + M++
Sbjct: 5 GFFAEI-LDGDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAK 63
Query: 67 EASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF 126
A K W + P KR E++ + L+E + L E+ K + + EV D+ +
Sbjct: 64 AAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISY 123
Query: 127 A-------VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179
+G + L P N L + PLGVV I FN+P + AL
Sbjct: 124 TAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPAL 183
Query: 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRIS 238
+ GN VV K P T A+ + F P + + G G+EIG + P ++
Sbjct: 184 IAGNAVVLK--PPTQGAVAAL--HMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVN 239
Query: 239 LVSFTG-------STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFA 291
+SFTG S K G++ Q +EL G +A I+++DAD+ LA +++
Sbjct: 240 CISFTGGDTGIAISKKAGMVPLQ----------MELGGKDACIVLEDADLDLAAANIIKG 289
Query: 292 AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351
+GQRCT + +L+ ES+ +++++ ++ +G P E + P+ + ES NF
Sbjct: 290 GFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP-EDDCDITPVVS-ESSANF 347
Query: 352 EKG-IENIKSQGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQT 409
+G + + K +G + EGN + P +++ + P I EE F PVL V++ +
Sbjct: 348 IEGLVMDAKEKGATFCQE---WKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS 404
Query: 410 FEEAVKINNSVPQGLSSSIFTRS 432
EE + N+ GL +FTR
Sbjct: 405 VEEGIHHCNASNFGLQGCVFTRD 427
|
Length = 496 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 1e-36
Identities = 80/283 (28%), Positives = 134/283 (47%), Gaps = 20/283 (7%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGVV VI A+N+P L A+ GN VV K + +P + + KL++
Sbjct: 109 PLGVVLVIGAWNYP-LNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLT-----KY 162
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
L + GG E+ + K+P + FTGS +VG +V Q + C LEL G +
Sbjct: 163 LDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSP 221
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI--- 329
+I+ ++K+A R + + AGQ C +L+H SI D+ ++ K+
Sbjct: 222 VIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSI----KDKFIEALKEAIKEFF 277
Query: 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT-IVEISP 388
G+ +K + ++ E IK GGK++ GG V +V PT IV
Sbjct: 278 GEDPKKSEDYSRIVNEFH---TKRLAELIKDHGGKVVYGGEVDIEN-KYVAPTIIVNPDL 333
Query: 389 TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+ +++EE+F P+L ++ ++ +E ++ NS P+ L+ F
Sbjct: 334 DSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGE 376
|
Length = 493 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 2e-36
Identities = 79/289 (27%), Positives = 135/289 (46%), Gaps = 22/289 (7%)
Query: 154 PLGVVGVITAFNFP-----CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
PLGVV +I +N+P ++G A+ G VV K + TP L++E+
Sbjct: 108 PLGVVLIIGPWNYPVLLALSPLVG-----AIAAGCTVVLKPSELTP----HTAALLAELV 158
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
+ P A G E + + + + +TGS +VG ++ + + LEL
Sbjct: 159 PKYLDPDAFQVVQGGVPETTALLEQ--KFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELG 216
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
G + +I+ +AD++LA + +L+ G AGQ C +L+ S+Y +++L V +
Sbjct: 217 GKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFY 276
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISP 388
G + P ++F + + + GK++ GG + E+ F+ PTIV
Sbjct: 277 PGGANAS-PDYTRIVNP---RHFNRLKSLLDTTKGKVVIGGEMDEAT-RFIPPTIVSDVS 331
Query: 389 TAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
D ++ EELF PVL ++K +EA+K+ NS L+ IFT I
Sbjct: 332 WDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEI 380
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 1e-32
Identities = 81/297 (27%), Positives = 144/297 (48%), Gaps = 32/297 (10%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-----ALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
P GVV +I +N+P + + A+ GN V K + TP + I K++ E F
Sbjct: 100 PYGVVLIIAPWNYP-----FQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETF 154
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
+ + GG E Q + + FTGS +VG +V + + LEL
Sbjct: 155 DEEYV-----AVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELG 208
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
G + I+ +DA++KLA + +++ AGQ C +L+HES+ + + +L + K+
Sbjct: 209 GKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFY 268
Query: 329 IGDPLEKGTLLGPLHTPESR----KNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV 384
DPLE R K+F++ + GKI+ GG+ + E +++PTI+
Sbjct: 269 GEDPLESPDY--------GRIINEKHFDRLAGLLD--NGKIVFGGN-TDRETLYIEPTIL 317
Query: 385 -EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440
++ +++EE+F P+L V+ + T +EA++I S P+ L+ +F+ + K L
Sbjct: 318 DNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVL 374
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 6e-30
Identities = 79/295 (26%), Positives = 148/295 (50%), Gaps = 29/295 (9%)
Query: 154 PLGVVGVITAFNFP-CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
P GV +I+ +N+P G A+ GN + K + TP + I K++ E F+ ++
Sbjct: 100 PKGVCLIISPWNYPFNLAFGPLVS-AIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDE 158
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
+ A+F G AE+ QA+ + P + FTGS VG +V + LEL G +
Sbjct: 159 V--AVFE---GDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSP 212
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I+ + AD+K A + + + AGQ C + +HES V D V+ K
Sbjct: 213 TIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHES----VKDAFVEHLKAE----- 263
Query: 333 LEK--GTLLGPLHTPE-----SRKNFE--KG-IENIKSQGGKILTGGSVIESEGNFVQPT 382
+EK G +P+ + ++F+ KG +++ ++G K+ GG ++ ++ PT
Sbjct: 264 IEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF-DAAQRYIAPT 322
Query: 383 IVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
++ ++P I++EE+F PVL ++ ++ +E ++ N+ P+ L+ +F++ N+
Sbjct: 323 VLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANV 377
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 1e-27
Identities = 85/389 (21%), Positives = 149/389 (38%), Gaps = 32/389 (8%)
Query: 64 ACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL--GRLLSIEMGKILPEGIGEVQEVI 121
A ++K L PKR + + +I L K + + G +L G + E I Q +
Sbjct: 7 AADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAENICGDQVQL 66
Query: 122 DMCDFAVGLSRQLNGSV--IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179
F + R + + W P G V VI AFNFP + AL
Sbjct: 67 RARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRW-PYGPVLVIGAFNFPLWIPLLQLAGAL 125
Query: 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISL 239
GN V+ K ++ + +L+ LP T G + QA+ P +
Sbjct: 126 AMGNPVIVKPHTAVSIVMQIMVRLLHYAG---LLPPEDVTLINGDGKTMQALLLHPNPKM 182
Query: 240 VSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDAD-IKLAVRSVLFAAVGTAGQ 298
V FTGS++V + + + + LEL+G N ++ DA + + +GQ
Sbjct: 183 VLFTGSSRVAEKL--ALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQ 240
Query: 299 RCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358
+CT L + E+ + +++K L + L L P I ++
Sbjct: 241 KCTAQSMLFVPEN------WSKTPLVEKLK--ALLARRKLEDLLLGPVQTFTTLAMIAHM 292
Query: 359 KSQGGKILTGGSVIE---SEGNFVQP--------TIVEISPTADIVKEELFAPVLYVMKF 407
++ G +L S + I EI T ++V EE+F P V+++
Sbjct: 293 ENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEY 352
Query: 408 QTFEEAVKINNSV-PQG-LSSSIFTRSPE 434
+ + A+ + G L+++I++ P
Sbjct: 353 KKDQLALVLELLERMHGSLTAAIYSNDPI 381
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 4e-25
Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 61/311 (19%)
Query: 154 PLGVVGVITAFNFPC--AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
PLGVVG+I +N+P A+ AL GN V+ K + TP + + +L++E F+ +
Sbjct: 101 PLGVVGIIVPWNYPLYLALGP--LIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDED 158
Query: 212 KLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ---------TVHQRFGK 262
++ A+ T GGA++ A + P L+ FTGST VG V + T
Sbjct: 159 EV--AVVT---GGADVAAAFSSLPFDHLL-FTGSTAVGRHVMRAAAENLTPVT------- 205
Query: 263 CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LEL G + II DAD+ A + F + AGQ C +L+ E + +
Sbjct: 206 --LELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKA 263
Query: 323 VYKQVKIGDPLEKGTLLGPLHTPESRKN-----------FE--KG-IENIKSQGGKI--L 366
+ P N + +G +E+ +++G ++ L
Sbjct: 264 AVAK----------------MYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIEL 307
Query: 367 TGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLS 425
+ + PT+V ++ +++EE+F P+L ++ + + +EA+ N+ P+ L+
Sbjct: 308 NPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLA 367
Query: 426 SSIFTRSPENI 436
F
Sbjct: 368 LYYFGEDKAEQ 378
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-24
Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 16/291 (5%)
Query: 154 PLGVVGV-ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
P G V V I AFNFP L A + G + K A T + A+ + + E
Sbjct: 143 PKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTM---VESGL 199
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQTVHQRFGKCLLELSGN 270
LP CG A G + +V+FTGS L V +R + E
Sbjct: 200 LPEGSLQLICGSA--GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSL 257
Query: 271 NAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYK 325
NA I+ +DA + L + ++ AGQ+CT RR+++ +++ + VL L
Sbjct: 258 NAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLA 317
Query: 326 QVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVE 385
+V +GDP E+G +GPL + E R + E + + + G ++ GG +G F PT++
Sbjct: 318 KVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL-DGAFFPPTLLL 376
Query: 386 I-SPTADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
P A V E F PV + EA ++ L +++ T PE
Sbjct: 377 AEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPE 427
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-23
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 32/289 (11%)
Query: 152 WNPLGVVGVITAFNFPCAVL-----GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE 206
PLGVV +I A+N+P + G A+ GNCVV K + +P A KL++E
Sbjct: 98 KEPLGVVLIIGAWNYPLQLTLVPLVG-----AIAAGNCVVIKPSEVSP----ATAKLLAE 148
Query: 207 VFERNKLPGAI----FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
+ +P + + GG E + K R + +TGST VG +V Q +
Sbjct: 149 L-----IPKYLDKECYPVVLGGVEETTELLKQ-RFDYIFYTGSTSVGKIVMQAAAKHLTP 202
Query: 263 CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LEL G + + DI +A R + + AGQ C +L + + ++ L
Sbjct: 203 VTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKK 262
Query: 323 VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382
K+ G+ ++ G + + ++F++ + + GGK+ GG E E ++ PT
Sbjct: 263 TLKEF-YGEDPKESPDYGRI---INDRHFQRLKKLLS--GGKVAIGGQTDEKE-RYIAPT 315
Query: 383 I-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+ ++ P+ +++EE+F P+L ++ +EA++ NS + L+ +F+
Sbjct: 316 VLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFS 364
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 2e-23
Identities = 81/309 (26%), Positives = 126/309 (40%), Gaps = 36/309 (11%)
Query: 152 WNPLGVVGV-ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER 210
P V V I AFNFP + AL+ G V+ K A T +T A +V ++ E
Sbjct: 141 LTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEA---VVKDIVES 197
Query: 211 NKLPGAIFTSFCGGAEIGQAIAK-DPRISLVSFTGSTKVGLMVQQTVHQ-------RFGK 262
LP CG G + + +V+FTGS ++ H RF
Sbjct: 198 GLLPEGALQLICGSV--GDLLDHLGEQ-DVVAFTGSAATAAKLR--AHPNIVARSIRFN- 251
Query: 263 CLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
E NA I+ DA + L V+ V AGQ+CT RR + E+ V+
Sbjct: 252 --AEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVI 309
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG-------S 370
+ L +V +GDP +G +GPL + E R++ + + +++ GG
Sbjct: 310 EALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATL-LAEAEVVFGGPDRFEVVG 368
Query: 371 VIESEGNFVQPTIVEISP--TADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
+G F PT++ A V + E F PV +M + + EA+++ L +S
Sbjct: 369 ADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVAS 428
Query: 428 IFTRSPENI 436
+ T P
Sbjct: 429 VVTNDPAFA 437
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 96.3 bits (240), Expect = 1e-21
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 33/294 (11%)
Query: 154 PLGVVGVITAFNFPCA-----VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
PLGVV VI+A+NFP V+G A+ GN VV K + P + + KL+ E
Sbjct: 101 PLGVVLVISAWNFPFLLSLEPVIG-----AIAAGNAVVLKPSELAPATSALLAKLIPEYL 155
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268
+ AI GG A+ + + + FTGS +VG ++ + LEL
Sbjct: 156 D----TKAI-KVIEGGVPETTALL-EQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELG 209
Query: 269 GNNAIIIMDDADIKLAVRSVLFAAVGT-AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQV 327
G +I+ D+K+AVR + G GQ C +L+ ES T++D L + ++
Sbjct: 210 GKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKF 269
Query: 328 KIGDPLEKGTLLGPLHTPESR---KNFEKGIENI---KSQGGKILTGGSVIESEGNFVQP 381
+P E L SR + + + + S KI+ GG E + +++P
Sbjct: 270 FGENPKESKDL--------SRIVNSHHFQRLSRLLDDPSVADKIVHGGERDE-KNLYIEP 320
Query: 382 TIVEISP-TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
TI+ P + I+ EE+F P+L ++ + EE+++I NS P+ L++ +FT++ E
Sbjct: 321 TILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKE 374
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 94.5 bits (236), Expect = 5e-21
Identities = 78/297 (26%), Positives = 122/297 (41%), Gaps = 41/297 (13%)
Query: 154 PLGVVGVITAFNFPCA--VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211
PLG V V A NFP A V G + AL G VV K P P + + + +
Sbjct: 105 PLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRAT 164
Query: 212 KLPGAIFTS-FCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR------FGKCL 264
LP +F+ GG E+G A+ K P I V FTGS + G + R +
Sbjct: 165 GLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYA--- 221
Query: 265 LELSGNNAIIIMDDADIKLAVRSVLFAA--VGT----AGQRCTTCRRLLIHESIYQTVLD 318
EL N + I+ A LA R A VG+ AGQ CT +L+ D
Sbjct: 222 -ELGSVNPVFILPGA---LAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAG---PAGD 274
Query: 319 QLVDVYKQVKIGDPLEK---GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
+ + + L T+L TP + + +G+E + + G + G
Sbjct: 275 AFIA-----ALAEALAAAPAQTML----TPGIAEAYRQGVEALAAAPGVRVLAGGAAAEG 325
Query: 376 GNFVQPTIVEISPTA----DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
GN PT+ ++ A ++EE+F P V+++ E + + ++ L+++I
Sbjct: 326 GNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATI 382
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 7e-20
Identities = 76/293 (25%), Positives = 126/293 (43%), Gaps = 26/293 (8%)
Query: 156 GVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215
GV I AFNFP L A AL+ G V+ K A T +T ++V +V LP
Sbjct: 150 GVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLT---QRMVKDVVAAGILPA 206
Query: 216 AIFTSFCGGAE--IGQAIAKDPRISLVSFTGS--TKVGLMVQQTVHQRFGKCLLELSGNN 271
+ CG + + D +VSFTGS T L V QR + +E N
Sbjct: 207 GALSVVCGSSAGLLDHLQPFD----VVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLN 262
Query: 272 AIIIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
+ ++ DA L V+ V+ +GQ+CT RR+ + E++Y V + L +
Sbjct: 263 SALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAK 322
Query: 327 VKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE------SEGNFVQ 380
+G+P G +GPL + G+ +++Q ++L G + V
Sbjct: 323 TTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQ-AEVLFDGGGFALVDADPAVAACVG 381
Query: 381 PTIVEISP--TADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
PT++ S A V + E+F PV ++ ++ A+ + L +S+++
Sbjct: 382 PTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYS 434
|
Length = 521 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 1e-16
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 20/286 (6%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGVV + +++NFP L I A+ GN VV K + P A + ++ +
Sbjct: 108 PLGVVLIFSSWNFPIG-LSLEPLIGAIAAGNAVVLKPSELAP----ATSAFLAANIPKYL 162
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
A+ GG +G+ + + + FTGS +VG ++ + LEL G
Sbjct: 163 DSKAV-KVIEGGPAVGEQLL-QHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCP 220
Query: 273 II---IMDDADIKLAVRSVLFAAVGT-AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
I + D K+AV ++ G+ AGQ C +L+ E +++ L K+
Sbjct: 221 CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFF 280
Query: 329 IGDPLEKGTLLGPLHTPESRKNFE--KGIENIKSQGGKILTGGSVIESEGNFVQPTIVEI 386
+P E ++ L ++K+F+ + I+ GGS+ E + F++PTI+
Sbjct: 281 GENPRESKSMARIL----NKKHFQRLSNLLKDPRVAASIVHGGSIDE-KKLFIEPTILLN 335
Query: 387 SP-TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
P +DI+ EE+F P+L ++ + E+++ NS P+ L+ FT
Sbjct: 336 PPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTN 381
|
Length = 484 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 79.5 bits (197), Expect = 8e-16
Identities = 83/312 (26%), Positives = 132/312 (42%), Gaps = 46/312 (14%)
Query: 154 PLGVVGV-ITAFNFPCAVLGWN-----ACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207
PL V V I AFNFP W A A + G + K A T +T A +V +
Sbjct: 147 PLEGVAVHINAFNFPV----WGMLEKLAP-AFLAGVPAIVKPATATAYLTEA---VVRLI 198
Query: 208 FERNKLP-GAIFTSFCGGAE--IGQAIAKDPRISLVSFTGSTKVGLMVQQTVH-----QR 259
E LP GA+ CG A + +D +V+FTGS ++ +
Sbjct: 199 VESGLLPEGAL-QLICGSAGDLLDHLDGQD----VVTFTGSAATAQKLRAHPNVVANSVP 253
Query: 260 FGKCLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
F E NA I+ DA + L V+ V+ AGQ+CT RR ++ ++
Sbjct: 254 FT---AEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVD 310
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG----- 369
V++ L +V +GDP +G +G L + E R++ + + + +I+ GG
Sbjct: 311 AVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAAL-LAAAEIVFGGPDSFE 369
Query: 370 --SVIESEGNFVQPTIV--EISPTADIVKE-ELFAPVLYVMKFQTFEEAVKINNSVPQGL 424
+G F PT++ + A V + E F PV +M + +EA+++ L
Sbjct: 370 VVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSL 429
Query: 425 SSSIFTRSPENI 436
+S+ T PE
Sbjct: 430 VASLVTADPEVA 441
|
Length = 675 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 78.9 bits (194), Expect = 9e-16
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 19/285 (6%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGVV VI+A+N+P +L + I A+ GN VV K + P + + KL+ + +
Sbjct: 112 PLGVVLVISAWNYP-FLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLD--- 167
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
A+ GA + + + +TGS+K+G ++ + +LEL G +
Sbjct: 168 -SSAV--RVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSP 224
Query: 273 IIIMDDADIKLAVRSVLFAAVG-TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331
+++ D D+K+ VR ++ G GQ C + +L + V+D + + +
Sbjct: 225 VVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKN 284
Query: 332 PLEK---GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEIS 387
P+E ++ H K ++ K KI+ GG + E + PTI +++
Sbjct: 285 PMESKDMSRIVNSTHFDRLSKLLDE-----KEVSDKIVYGGEK-DRENLKIAPTILLDVP 338
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+ I+ EE+F P+L ++ EE+ + S P+ L++ +FT +
Sbjct: 339 LDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHN 383
|
Length = 484 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 2e-13
Identities = 69/314 (21%), Positives = 130/314 (41%), Gaps = 45/314 (14%)
Query: 154 PLGVVGVITAFNFPCAVLGWNA----CIALVCGNCVVWKGAPTTPLITIAIT-KLVSEV- 207
P GV VI FP WN +L GN V+ K P L +AIT ++ EV
Sbjct: 193 PRGVALVIGCSTFPT----WNGYPGLFASLATGNPVIVKPHPAAIL-PLAITVQVAREVL 247
Query: 208 ----FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
F+ N + A T I Q +A P + ++ FTGS G ++ Q +
Sbjct: 248 AEAGFDPNLVTLAADTP---EEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ--AQV 302
Query: 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
E +G N +++ D+K +R++ F+ +GQ CTT + + + QT D
Sbjct: 303 YTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQT--DDGRKS 360
Query: 324 YKQVK----------IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
+ +V + DP LLG + +P++ + Q G++L +
Sbjct: 361 FDEVAADLAAAIDGLLADPARAAALLGAIQSPDTLARIAEA-----RQLGEVLLASEAVA 415
Query: 374 S---EGNFVQ-PTIVEI-SPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ---GLS 425
V+ P ++++ + EE F P+ +V+ + + ++++ + ++
Sbjct: 416 HPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMT 475
Query: 426 SSIFTRSPENIFKW 439
+++ PE + +
Sbjct: 476 VGVYSTDPEVVERV 489
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 3e-13
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 45/309 (14%)
Query: 154 PLGVVGVITAFNFPCAVLGWNA----CIALVCGNCVVWKGAPTTPLITIAIT-KLVSEV- 207
P G+ VI FP WN +L GN V+ K P ++ +A+T ++ EV
Sbjct: 193 PRGIALVIGCSTFPT----WNTYPGLFASLATGNPVLVKPHPGA-ILPLALTVQVAREVL 247
Query: 208 ----FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
F+ N + A F G E Q +A DP + ++ FTGS G ++Q + R +
Sbjct: 248 GEAGFDPNLVTLAAFDP---GHEAAQRLATDPAVRIIDFTGSNAFGQWLEQ--NARQAQV 302
Query: 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323
E +G N +II D K +R++ F+ +GQ CTT + +L+ +T DQ
Sbjct: 303 YTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRT--DQGRKS 360
Query: 324 YKQVK----------IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
Y +V +GDP +LG + +P++ + G++L + IE
Sbjct: 361 YDEVAADLATAIDGLLGDPARATAVLGAIQSPDTLARIAEA-----RALGEVLLASTKIE 415
Query: 374 S---EGNFVQ-PTIVEI-SPTADIVKEELFAPVLYVMKFQTFEEAVKI-NNSVPQ--GLS 425
G V+ P +++ + +E F P+ +V+ AV++ SV + ++
Sbjct: 416 HPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMT 475
Query: 426 SSIFTRSPE 434
+T PE
Sbjct: 476 VGAYTTDPE 484
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 5e-13
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 379 VQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+ +V++ P I +EE+F PVL V++F+ EEA+ + N GL++ +FTR +
Sbjct: 255 LVTVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALR 314
Query: 439 WLG 441
Sbjct: 315 VAE 317
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 3e-08
Identities = 106/416 (25%), Positives = 172/416 (41%), Gaps = 66/416 (15%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLED---YEEGMKACSEASKIWMELPAPKR 80
V GKWK + ++P+N K +V + ++ + + ++ C + S + L P+R
Sbjct: 2 LVAGKWKGASNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPK-SGLHNPLKNPER 60
Query: 81 ----GEVVRQIGDALR--EKLHHLGRLLSIEMGKILPEGIGEV---QEVI-----DMCDF 126
G+V ++ LR E RL+ K + +GEV ++ + D F
Sbjct: 61 YLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRF 120
Query: 127 AVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVV 186
L+R N + + W P G V +IT FNFP + AL GN
Sbjct: 121 ---LARSFNVPGDHQGQQSSGY--RW-PYGPVAIITPFNFPLEIPALQLMGALFMGN--- 171
Query: 187 WKGAPTTPLITI-AITKLVSEVFER-NKLPGAIFTSF----CGGAEIGQAIAK-DPRISL 239
PL+ + + +V E F R L G T G + + + + +PR++L
Sbjct: 172 ------KPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTL 225
Query: 240 VSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD-ADIKLAVRSVLFAAVGTAGQ 298
FTGS+KV + +H GK LE +G + I+ D +D+ A +GQ
Sbjct: 226 --FTGSSKVAERLALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQ 280
Query: 299 RCTTCRRLLIHESIYQT-VLDQLVDVYKQVKIGDPLEKGTLLGPLHT--PESRKNFEKGI 355
+C+ L HE+ Q +LD+L + +Q K+ D +GP+ T E + +
Sbjct: 281 KCSAQSILFAHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWTTERILDHVDKL 335
Query: 356 ENIKSQ----GGKILTGGSVIESEGNFVQPTIV-------EISPTADIVKEELFAP 400
I GGK LT S+ G +PT V I ++V E+F P
Sbjct: 336 LAIPGAKVLFGGKPLTNHSIPSIYGA-YEPTAVFVPLEEIAIEENFELVTTEVFGP 390
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 5e-07
Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 27/249 (10%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213
P+GV I P + + +A + N +++ P+ P A+ L +
Sbjct: 100 PIGVTMHILPSTNPLSGI-TSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGP 158
Query: 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273
+ E+ + + P+I L+ TG V V ++ N+
Sbjct: 159 KILVLYVPHPSDELAEELLSHPKIDLIVATGGRD---AVDAAVKHSPHIPVIGFGAGNSP 215
Query: 274 IIMDD-ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD--VYKQVKI- 329
+++D+ AD + A SV + C + + L + + + + ++ V + +K+
Sbjct: 216 VVVDETADEERASGSVHDSKF-FDQNACASEQNLYVVDDVLDPLYEEFKLKLVVEGLKVP 274
Query: 330 ------------GDPLEKGTLLGPLHTPESRKNFEKGIEN---IKSQGGKILTGGSVIES 374
E + PL + +EN I GG T
Sbjct: 275 QETKPLSKETTPSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHK 334
Query: 375 EGN---FVQ 380
FVQ
Sbjct: 335 INKVDDFVQ 343
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 61/309 (19%), Positives = 120/309 (38%), Gaps = 25/309 (8%)
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ + N L P+GVV IT P + + + + I+L N +++ P +T
Sbjct: 80 VLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQ 139
Query: 199 AITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
L+ + P + E+ Q + K P I L+ TG G V + +
Sbjct: 140 RAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVKAAY 195
Query: 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
+ +GN ++I + ADIK AV+S++ + G C + + +++ +S+Y V+
Sbjct: 196 SSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVM 255
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI--LTGGSVI-ES 374
+ L++ P KN + + + KI G V E+
Sbjct: 256 RLFEGQGAYKLTAEELQQ-------VQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQET 308
Query: 375 EGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ----GLSSSIFT 430
+ T + E +PVL + + F +A ++ G +S++++
Sbjct: 309 RILIGEVTSLAEHEPF---AHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYS 365
Query: 431 R---SPENI 436
+ EN+
Sbjct: 366 DNIKAIENM 374
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 65/304 (21%), Positives = 121/304 (39%), Gaps = 27/304 (8%)
Query: 145 NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLV 204
N + L + P GV+G IT P + N+ L GN VV+ P ++ +L+
Sbjct: 88 NGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELI 147
Query: 205 SEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263
++ P + + E + P I+L+ TG V + GK
Sbjct: 148 NKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-----GKK 202
Query: 264 LLEL-SGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
+ +GN +++ + ADI+ A R ++ A C + ++ +S+ ++ +
Sbjct: 203 AIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQR 262
Query: 323 VYKQVKIGDP-----LEKGTLLGPLHTPESRKNFEKGIENIKSQ-GGKILTGGSVIESEG 376
+ D LE L TP ++K K I G ++ +I
Sbjct: 263 -NGAYVLNDEQAEQLLEVVLLTNKGATP-NKKWVGKDASKILKAAGIEVPADIRLI---- 316
Query: 377 NFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL--SSSIFTRSPE 434
IVE V EE P+L V++ + F+EA+++ + G ++ I +++ E
Sbjct: 317 ------IVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVE 370
Query: 435 NIFK 438
N+ K
Sbjct: 371 NLTK 374
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.002
Identities = 67/305 (21%), Positives = 114/305 (37%), Gaps = 49/305 (16%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213
P+GV+ + P + + A IAL N +++ P +I K++ E
Sbjct: 95 PVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGA 154
Query: 214 P-GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNN 271
P G I E+ Q + K P + L+ TG MV+ GK + + GN
Sbjct: 155 PEGLIQWIEEPSIELTQELMKHPDVDLILATGGPG---MVKAA--YSSGKPAIGVGPGNV 209
Query: 272 AIIIMDDADIKLAVRSVLFAAV---GTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328
I + ADIK AV+ ++ + GT C + + +++ + IY V +L
Sbjct: 210 PAYIDETADIKRAVKDIILSKTFDNGTI---CASEQSVIVDDEIYDEVRAELKR------ 260
Query: 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV------IESEGNFVQP- 381
L E ++ EK + + G L V I P
Sbjct: 261 -----RGAYFL----NEEEKEKLEKALFD----DGGTLNPDIVGKSAQKIAELAGIEVPE 307
Query: 382 -TIVEISPTADIVKEELFA-----PVLYVMKFQTFEEAVKINNSVPQ----GLSSSIFTR 431
T V ++ + EE + PVL + + FEEA++ + + G ++ I +
Sbjct: 308 DTKVLVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSN 367
Query: 432 SPENI 436
E I
Sbjct: 368 DEEVI 372
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|143398 cd07079, ALDH_F18-19_ProA-GPR, Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 0.004
Identities = 49/223 (21%), Positives = 82/223 (36%), Gaps = 62/223 (27%)
Query: 141 SERPNHMMLETWN-PLGVVGVITAF-NFPCAVLGWN-----ACIALVCGNCVVWKGAPTT 193
PN + +E PLGV+G+I + + P N A + L GN V+ +G
Sbjct: 95 WTLPNGLQIEKVRVPLGVIGII--YESRP------NVTVDAAALCLKSGNAVILRGGSEA 146
Query: 194 PLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253
A+ +++ E E LP + L+ T V +++
Sbjct: 147 LHSNRALVEIIQEALEEAGLPEDA-------------------VQLIPDTDREAVQELLK 187
Query: 254 QT-----VHQRFGKCLLE-------------LSGNNAIIIMDDADIKLAVRSVLFAAVGT 295
+ R G L+ GN + + + AD+++AVR V+ A
Sbjct: 188 LDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKT-- 245
Query: 296 AGQR---CTTCRRLLIHESIYQTVLDQLVDVY--KQVKI-GDP 332
QR C LL+H I + L +L + V++ GD
Sbjct: 246 --QRPSVCNALETLLVHRDIAEEFLPKLAEALREAGVELRGDE 286
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). Length = 406 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 441 | |||
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.98 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.92 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.82 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.32 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 98.82 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.65 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.51 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 93.3 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 82.64 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 80.69 | |
| PF12340 | 229 | DUF3638: Protein of unknown function (DUF3638); In | 80.63 |
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-99 Score=706.42 Aligned_cols=417 Identities=31% Similarity=0.541 Sum_probs=400.8
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
....||+|+|+. .+++|++.||++|+.|+.++.++.++.++|+++|++||++|+.++..+|.++|+++.++|.+|.++
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 346799999987 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
|+++++.|.|||+.+|++|+..+..+++||+..+++..+...+...+.+..++.++|+||+++|+|||||...+.++..+
T Consensus 103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 99999999999999999999999999999999999999998887777888899999999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC----CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG----GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g----~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
||++||+||+||+++||++++.+ +++.++||+|+|++|++++ ..++++.|+.+|.|++|+||||+.+|+.++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLal----a~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~ 258 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALAL----AKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILM 258 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHH----HHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHH
Confidence 99999999999999999999987 5567899999999999985 358999999999999999999999999999
Q ss_pred HHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 254 ~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
++++.+.|++.+||||+.|+||++|||+|.|++.....+|.|+||.|.+..|+|||++|||+|+.+|.++++++++||.+
T Consensus 259 ~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~ 338 (503)
T KOG2451|consen 259 AQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGL 338 (503)
T ss_pred HhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
+++++.||||+..+.++++.++++|+.+|+++++||+... .+++|++|||+ +++++|-+..||+|||+.+|++|+|.|
T Consensus 339 ~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdtee 418 (503)
T KOG2451|consen 339 DPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEE 418 (503)
T ss_pred CCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHH
Confidence 9999999999999999999999999999999999999544 45699999999 999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|+++|+++.||++|+||+|..+..+++
T Consensus 419 Evi~~ANdt~vGLAgYvfs~~~s~~~rVa 447 (503)
T KOG2451|consen 419 EVIEWANDTRVGLAGYVFSNNLSRLFRVA 447 (503)
T ss_pred HHHHHhccCccceeeEEeccCHHHHHHHH
Confidence 99999999999999999999999987753
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-98 Score=768.14 Aligned_cols=440 Identities=85% Similarity=1.363 Sum_probs=420.9
Q ss_pred CCcchhhHHHHHhccCCCCCCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHH
Q 013505 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80 (441)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R 80 (441)
|-|+..||++|.++..+..+.++||||+|+.++.+++++||.||+++++++.++.+|+++|+++|++||+.|++++..+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R 80 (508)
T PLN02315 1 MGFARKEYEFLSEIGLSSRNLGCYVGGEWRANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKR 80 (508)
T ss_pred CcchHHHHHHHHHHhcCccccCceECCEEecCCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 78999999999999999999999999999877788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEE
Q 013505 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGV 160 (441)
Q Consensus 81 ~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~ 160 (441)
.++|+++++.|++++++|++++++|+|||+.+++.|+..+++.++|++...+.+.+...+...++...+..++|+|||++
T Consensus 81 ~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~ 160 (508)
T PLN02315 81 GEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGV 160 (508)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEE
Confidence 99999999999999999999999999999999999999999999999988887766555443344455678999999999
Q ss_pred EcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEE
Q 013505 161 ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240 (441)
Q Consensus 161 i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v 240 (441)
|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+++|+.+.++.|+.||+|++|
T Consensus 161 I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v 240 (508)
T PLN02315 161 ITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLV 240 (508)
T ss_pred ECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999987889999999999999
Q ss_pred EeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHH
Q 013505 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320 (441)
Q Consensus 241 ~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l 320 (441)
.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 241 ~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 320 (508)
T PLN02315 241 SFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQL 320 (508)
T ss_pred EEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccc
Q 013505 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAP 400 (441)
Q Consensus 321 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgP 400 (441)
+++++++++|+|+++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||++++++|++++||+|||
T Consensus 321 ~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGP 400 (508)
T PLN02315 321 LTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGP 400 (508)
T ss_pred HHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCC
Confidence 99999999999999999999999999999999999999999999999998655579999999999999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 401 v~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 401 Vl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~ 440 (508)
T PLN02315 401 VLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWI 440 (508)
T ss_pred EEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHh
Confidence 9999999999999999999999999999999999999875
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-99 Score=735.63 Aligned_cols=415 Identities=33% Similarity=0.588 Sum_probs=397.0
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
..+||||+|.+ ++++++++||.||+++++++.++.+|++.|+++|++||+ .|++++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 47999999987 789999999999999999999999999999999999999 69999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
.|+.+.+.+.|||+.+++ .++..+++.++|++.+++...+..++.. .....+++++|+||++.|.|||||+....|++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~-~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTD-GEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCC-CceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999998 8999999999999999988866655532 45678899999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
+|||++||+||+||++++|+|++.+ ..++.+||+|+||+|+|+| |.+.+..|.+||+|++|+||||+.+|+.|++
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~----~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~ 255 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYL----ASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIME 255 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHH----HHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhh
Confidence 9999999999999999999999986 5668899999999999999 9999999999999999999999999999999
Q ss_pred Hhhc-cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHh-hccCCC
Q 013505 255 TVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ-VKIGDP 332 (441)
Q Consensus 255 ~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p 332 (441)
.+++ ++|+++||||||+|.||++|||++.|++.+..+.|+|+||.|++.+|+|||+++||+|+++++++.++ +++|||
T Consensus 256 aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP 335 (501)
T KOG2450|consen 256 AAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDP 335 (501)
T ss_pred hhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCC
Confidence 9884 58999999999999999999999999999999999999999999999999999999999999999966 999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
+++.+.+||.+++.+++++.+||+.++++|+++++||.+..+.|+|++|||+ ++.++|.|++||+||||++|++|++.|
T Consensus 336 ~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~e 415 (501)
T KOG2450|consen 336 FDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEE 415 (501)
T ss_pred CCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHH
Confidence 9999999999999999999999999999999999999886678999999999 999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|+++|++.|||++.|||+|.+++.+++
T Consensus 416 E~i~~AN~t~yGLAa~V~t~dl~~a~~va 444 (501)
T KOG2450|consen 416 EVIERANNTTYGLAAGVFTKDLDKAHRVA 444 (501)
T ss_pred HHHHHhcCCcccceeeEeccChHHHHHHH
Confidence 99999999999999999999999998874
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-96 Score=746.08 Aligned_cols=411 Identities=37% Similarity=0.656 Sum_probs=390.0
Q ss_pred CceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013505 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (441)
Q Consensus 22 ~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (441)
.+||+|+|+....+++++||+||+++++++.++.+|+++|+++|+.||+.|+++++.+|.++|++++++|++|+++|+++
T Consensus 2 ~~~i~g~~~~~~~~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~ 81 (472)
T COG1012 2 KLLIDGEWVDGASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAAL 81 (472)
T ss_pred CccCCCeecCCCCceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 57999999985559999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcC
Q 013505 102 LSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVC 181 (441)
Q Consensus 102 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaa 181 (441)
++.|+|||+.+++.++..+++.++|++...+++.+...+... +...+++++|+|||++|+|||||+.+.+|+++|||++
T Consensus 82 ~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaa 160 (472)
T COG1012 82 ITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAA 160 (472)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHc
Confidence 999999999999999999999999999999887776544332 5678899999999999999999999999999999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccC
Q 013505 182 GNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260 (441)
Q Consensus 182 GN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~ 260 (441)
||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 161 GntVV~KPse~tp~sa~~l----~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~ 236 (472)
T COG1012 161 GNTVVLKPSEQTPLSALAL----AELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANL 236 (472)
T ss_pred CCEEEEECcccCcHHHHHH----HHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcC
Confidence 9999999999999998875 6678889999999999999 7779999999999999999999999999999999999
Q ss_pred CceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHh-hccCCCCCCCCcc
Q 013505 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ-VKIGDPLEKGTLL 339 (441)
Q Consensus 261 ~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~~~~ 339 (441)
||+++|||||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++ +++|||.|+.++|
T Consensus 237 k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~ 315 (472)
T COG1012 237 KPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDL 315 (472)
T ss_pred CcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 66 8999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHh
Q 013505 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418 (441)
Q Consensus 340 gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n 418 (441)
||+++..++++++++|++++++|+++++||+. .. |+|++|||+ +++++|++++||+||||++|++|+|+||||+++|
T Consensus 316 Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN 393 (472)
T COG1012 316 GPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELAN 393 (472)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999999983 33 999999999 8999999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHhhh
Q 013505 419 SVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 419 ~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|||+++|||+|..++.+++
T Consensus 394 ~t~yGL~a~v~t~d~~~~~~~~ 415 (472)
T COG1012 394 DTEYGLAAAIFTRDLARAFRVA 415 (472)
T ss_pred CCCCCceEEEEcCCHHHHHHHH
Confidence 9999999999999999888754
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-95 Score=746.75 Aligned_cols=415 Identities=29% Similarity=0.549 Sum_probs=392.0
Q ss_pred CceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 22 ~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
.+||+|+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|++++++|+
T Consensus 12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (482)
T PRK11241 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLA 91 (482)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4799999975 56789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhh
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 179 (441)
+++++|+|||+.+++.|+..+++.++|++...+...+...+...++...+.+++|+|||++|+|||||+...++++++||
T Consensus 92 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 171 (482)
T PRK11241 92 RLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPAL 171 (482)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHH
Confidence 99999999999999999999999999999888776554443322344567889999999999999999999999999999
Q ss_pred cCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhc
Q 013505 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (441)
Q Consensus 180 aaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (441)
++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|+.|+||||+++|+.|++.+++
T Consensus 172 aaGN~VVlKPs~~tp~~~~~l----~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~ 247 (482)
T PRK11241 172 AAGCTMVLKPASQTPFSALAL----AELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAK 247 (482)
T ss_pred HhCCEEEEECCCCChHHHHHH----HHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 999999999999999999875 6778899999999999999 67889999999999999999999999999999999
Q ss_pred cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCc
Q 013505 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (441)
Q Consensus 259 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 338 (441)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++.++
T Consensus 248 ~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~ 327 (482)
T PRK11241 248 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVT 327 (482)
T ss_pred cCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHH
Q 013505 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKIN 417 (441)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~ 417 (441)
+||++++.++++++++|++|+++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|++|||+++
T Consensus 328 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~a 407 (482)
T PRK11241 328 IGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQA 407 (482)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHh
Confidence 9999999999999999999999999999999764346899999999 899999999999999999999999999999999
Q ss_pred hcCCCCcEEEEecCCHHHHHhhh
Q 013505 418 NSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 418 n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|||++||||+|.++++++.
T Consensus 408 N~s~~GL~a~Vft~d~~~a~~~~ 430 (482)
T PRK11241 408 NDTEFGLAAYFYARDLSRVFRVG 430 (482)
T ss_pred hCCCCCceEEEEcCCHHHHHHHH
Confidence 99999999999999999998864
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-95 Score=751.03 Aligned_cols=417 Identities=25% Similarity=0.442 Sum_probs=392.1
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++..++++||+||+++++++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 112 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ 191 (604)
T PLN02419 112 PRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMD 191 (604)
T ss_pred cccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4577899999986 35679999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
+|++++++|+|||+.+++.|+..+++.++|++..++...+...+...++...++.++|+|||++|+|||||+...+++++
T Consensus 192 ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~ia 271 (604)
T PLN02419 192 KLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFP 271 (604)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999888776665444322344567889999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|+||+|+|+.+.++.|+.|++|++|+||||+.+|+.|++.+
T Consensus 272 pALaAGNtVVlKPSe~tp~ta~~l----~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~A 347 (604)
T PLN02419 272 VAVTCGNTFILKPSEKDPGASVIL----AELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARA 347 (604)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHH----HHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHH
Confidence 999999999999999999999875 6778899999999999999667899999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.+++
T Consensus 348 a~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~ 426 (604)
T PLN02419 348 AAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPD 426 (604)
T ss_pred hccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc---C-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI---E-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~---~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
++|||++++.+++++.++|++|+++|+++++||.+. + ..|+|++|||+ +++++|.+++||+||||++|++|+|++
T Consensus 427 t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~d 506 (604)
T PLN02419 427 ADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFD 506 (604)
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHH
Confidence 999999999999999999999999999999999752 1 35899999999 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||++||||+|.+++++++
T Consensus 507 EAI~laN~s~yGLaasVfT~d~~~a~~~a 535 (604)
T PLN02419 507 EAISIINKNKYGNGAAIFTSSGAAARKFQ 535 (604)
T ss_pred HHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 99999999999999999999999998874
|
|
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-92 Score=728.61 Aligned_cols=416 Identities=66% Similarity=1.084 Sum_probs=394.5
Q ss_pred eecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 013505 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLS 103 (441)
Q Consensus 24 ~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 103 (441)
+|+|+|+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++++
T Consensus 2 ~i~g~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 81 (474)
T cd07130 2 VYDGEWGGGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVS 81 (474)
T ss_pred eECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999987778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCC
Q 013505 104 IEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGN 183 (441)
Q Consensus 104 ~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN 183 (441)
+|+|||+.+++.|+..+++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+.+.++++++||++||
T Consensus 82 ~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN 161 (474)
T cd07130 82 LEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGN 161 (474)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCC
Confidence 99999999999999999999999988777666554443334555677899999999999999999999999999999999
Q ss_pred EEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCce
Q 013505 184 CVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (441)
Q Consensus 184 ~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (441)
+||+|||+.+|.++..+++++.++|.++|+|+|++|+|+|+.+.++.|++||+|++|+||||+.+|+.|++.++++++|+
T Consensus 162 ~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~~~ 241 (474)
T cd07130 162 VVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRS 241 (474)
T ss_pred eEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999999999999999999999997678999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCC
Q 013505 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343 (441)
Q Consensus 264 ~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~ 343 (441)
++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++
T Consensus 242 ~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli 321 (474)
T cd07130 242 LLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLH 321 (474)
T ss_pred EEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCC
Q 013505 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422 (441)
Q Consensus 344 ~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~ 422 (441)
++.++++++++|++|+++|+++++||...+.+|+|++|||+ ++++ |++++||+||||++|++|+|++|||+++|+++|
T Consensus 322 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~ 400 (474)
T cd07130 322 TKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQ 400 (474)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCC
Confidence 99999999999999999999999999865556899999999 5555 999999999999999999999999999999999
Q ss_pred CcEEEEecCCHHHHHhhh
Q 013505 423 GLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 423 gl~asv~t~d~~~~~~~~ 440 (441)
||+++|||+|.+++++++
T Consensus 401 gL~a~v~t~d~~~a~~~~ 418 (474)
T cd07130 401 GLSSSIFTTDLRNAFRWL 418 (474)
T ss_pred CceEEEEcCCHHHHHHHH
Confidence 999999999999999874
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-92 Score=723.67 Aligned_cols=414 Identities=28% Similarity=0.481 Sum_probs=387.6
Q ss_pred CceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 22 ~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++
T Consensus 3 ~~~i~g~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 82 (472)
T TIGR03374 3 KLLINGELVSGEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAE 82 (472)
T ss_pred CceECCEEecCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 5799999986 567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhh
Q 013505 101 LLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 179 (441)
++++|+|||+.++. .|+..+++.+++++...+.+.+...+...++...++.++|+|||++|+|||||+...++++++||
T Consensus 83 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~AL 162 (472)
T TIGR03374 83 LESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPAL 162 (472)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHH
Confidence 99999999999996 59999999999999887766554222212344567889999999999999999999999999999
Q ss_pred cCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhc
Q 013505 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (441)
Q Consensus 180 aaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (441)
++||+||+|||+.+|.++..+++ ++.+ ++|+|++|+++| +.++++.|+.||+|++|+||||+++|+.|++.+++
T Consensus 163 aaGN~VV~KPs~~tp~~~~~l~~----l~~~-~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 237 (472)
T TIGR03374 163 AAGNCVVLKPSEITPLTALKLAE----LAKD-IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP 237 (472)
T ss_pred hcCCEEEecCCCCCCHHHHHHHH----HHHH-hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 99999999999999999988654 4555 499999999999 78899999999999999999999999999999999
Q ss_pred cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCc
Q 013505 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (441)
Q Consensus 259 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 338 (441)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++++
T Consensus 238 ~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~ 317 (472)
T TIGR03374 238 SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTE 317 (472)
T ss_pred cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHCC-CEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHH
Q 013505 339 LGPLHTPESRKNFEKGIENIKSQG-GKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (441)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~G-a~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~ 416 (441)
+||+++..++++++++|++++++| +++++||...++.|+|++|||+ +++++|++++||+||||++|++|+|+||||++
T Consensus 318 ~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 397 (472)
T TIGR03374 318 LGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNW 397 (472)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHH
Confidence 999999999999999999999999 7999999765446899999999 89999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEecCCHHHHHhhh
Q 013505 417 NNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 417 ~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+++|||++||||+|.+++.+++
T Consensus 398 an~~~~gL~a~vft~d~~~~~~~~ 421 (472)
T TIGR03374 398 ANDSQYGLASSVWTKDVGRAHRLS 421 (472)
T ss_pred HhCCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999998874
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-92 Score=726.13 Aligned_cols=428 Identities=30% Similarity=0.522 Sum_probs=398.9
Q ss_pred HHHHhccCC-CCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHH
Q 013505 9 EFLSEIGLS-PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVR 85 (441)
Q Consensus 9 ~~~~~~~~~-~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~ 85 (441)
.++..++.. ..+.++||+|+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+
T Consensus 12 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~ 91 (498)
T PLN02278 12 SALVKLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILR 91 (498)
T ss_pred HHHHHhhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 344555554 34577999999975 467899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCC
Q 013505 86 QIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFN 165 (441)
Q Consensus 86 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 165 (441)
++++.|++++++|++++++|+|||..+++.|+..+++.+++++...+...+...+...++...+.+++|+|||++|+|||
T Consensus 92 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN 171 (498)
T PLN02278 92 RWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWN 171 (498)
T ss_pred HHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCc
Confidence 99999999999999999999999999999999999999999998887766554443333445677889999999999999
Q ss_pred chHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeC
Q 013505 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (441)
Q Consensus 166 ~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (441)
||+...++++++||++||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+|++|+|||
T Consensus 172 ~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l----~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTG 247 (498)
T PLN02278 172 FPLAMITRKVGPALAAGCTVVVKPSELTPLTALAA----AELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTG 247 (498)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEEC
Confidence 99999999999999999999999999999998865 6778899999999999999 667899999999999999999
Q ss_pred ChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHH
Q 013505 245 STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324 (441)
Q Consensus 245 s~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 324 (441)
|+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 248 S~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~ 327 (498)
T PLN02278 248 STAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAV 327 (498)
T ss_pred cHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEE
Q 013505 325 KQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLY 403 (441)
Q Consensus 325 ~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~ 403 (441)
+++++|+|+++++++||++++.+++++.++|++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++
T Consensus 328 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~ 407 (498)
T PLN02278 328 QKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAP 407 (498)
T ss_pred HhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEE
Confidence 999999999999999999999999999999999999999999999764446899999999 8999999999999999999
Q ss_pred EEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 404 VMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 404 v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 408 v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~ 444 (498)
T PLN02278 408 LTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVS 444 (498)
T ss_pred EEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999999998874
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-92 Score=727.74 Aligned_cols=417 Identities=29% Similarity=0.488 Sum_probs=391.0
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhh
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREK 94 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 94 (441)
..+++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|+++++.|+++
T Consensus 19 ~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 98 (501)
T PLN02766 19 KFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEH 98 (501)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence 3456899999986 467899999999999999999999999999999999997 599999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
+++|++++++|+|||+.+++ .|+..+++.+++++...++..+..++.. .....++.++|+|||++|+|||||+.+.++
T Consensus 99 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 177 (501)
T PLN02766 99 IEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTMFFM 177 (501)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHHHHH
Confidence 99999999999999999997 5999999999999988777665543322 234467789999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|++||+|+.|+||||+.+|+.|
T Consensus 178 ~~~~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i 253 (501)
T PLN02766 178 KVAPALAAGCTMVVKPAEQTPLSALFY----AHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKI 253 (501)
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHH----HHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 999999999999999999999999865 6678899999999999999 77899999999999999999999999999
Q ss_pred HHHhh-ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCC
Q 013505 253 QQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (441)
Q Consensus 253 ~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 331 (441)
++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 254 ~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~ 333 (501)
T PLN02766 254 MQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGD 333 (501)
T ss_pred HHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCC
Confidence 99998 58999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
|+++++++||++++.++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 334 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~ 413 (501)
T PLN02766 334 PFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTV 413 (501)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCH
Confidence 99999999999999999999999999999999999999764456899999999 89999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|||+++|+++|||++||||+|.+++.+++
T Consensus 414 deai~~aN~~~~GL~a~Vft~d~~~a~~~~ 443 (501)
T PLN02766 414 EEAIKKANNTKYGLAAGIVTKDLDVANTVS 443 (501)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999999999998874
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-91 Score=718.71 Aligned_cols=416 Identities=28% Similarity=0.525 Sum_probs=389.8
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999975 567899999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCC--CC-ceeEEEEeccceEEEEcCCCchHHhHH
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSER--PN-HMMLETWNPLGVVGVITAFNFPCAVLG 172 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 172 (441)
+|++++++|+|||+.++. .|+...++.+++++.+.+...+...+... ++ ...+..++|+|||++|+|||||+...+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 999999999999999996 69999999999999888777655433211 22 245778999999999999999999999
Q ss_pred HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHH
Q 013505 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (441)
Q Consensus 173 ~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (441)
+++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 241 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKF----AELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKH 241 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHH----HHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 9999999999999999999999999875 6778899999999999999 7788999999999999999999999999
Q ss_pred HHHHhhc-cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 252 VQQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 252 i~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
|++.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 242 i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g 321 (486)
T cd07140 242 IMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIG 321 (486)
T ss_pred HHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCcc
Confidence 9999985 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeC-
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ- 408 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~- 408 (441)
+|+++++++||++++.+++++.++|++|+++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 322 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~ 401 (486)
T cd07140 322 DPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDD 401 (486)
T ss_pred CCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCC
Confidence 999999999999999999999999999999999999999765556899999999 899999999999999999999998
Q ss_pred -CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 409 -TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 409 -~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|||+++|+++|||++||||+|.+++++++
T Consensus 402 ~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~ 434 (486)
T cd07140 402 GDVDGVLQRANDTEYGLASGVFTKDINKALYVS 434 (486)
T ss_pred CCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 69999999999999999999999999998874
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-91 Score=717.59 Aligned_cols=418 Identities=61% Similarity=1.018 Sum_probs=395.9
Q ss_pred ceecCeeccC-CCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013505 23 CFVNGKWKAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (441)
Q Consensus 23 ~~I~g~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (441)
+||||+|+.+ +.+++++||+||+++++++.++.+|++.++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~ 80 (478)
T cd07086 1 GVIGGEWVGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRL 80 (478)
T ss_pred CcCCCEEecCCCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 5899999864 478999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcC
Q 013505 102 LSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVC 181 (441)
Q Consensus 102 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaa 181 (441)
+++|+|||+.+++.|+..+++.+++++...+.+.+...+...++...+..++|+|||++|+|||||+...++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaa 160 (478)
T cd07086 81 VSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVC 160 (478)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999988887766554433334456788999999999999999999999999999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCC
Q 013505 182 GNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261 (441)
Q Consensus 182 GN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~ 261 (441)
||+||+|||+.+|.++..+++++.++|.++|+|+|++|+|+|+.+.++.|..||+++.|.||||+.+|+.|++.++++++
T Consensus 161 GN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~~ 240 (478)
T cd07086 161 GNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFG 240 (478)
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999954589999999999999999999999999999999999
Q ss_pred ceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCC
Q 013505 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGP 341 (441)
Q Consensus 262 ~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gp 341 (441)
++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||
T Consensus 241 ~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 320 (478)
T cd07086 241 RVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGP 320 (478)
T ss_pred cEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHCCCEEEecCcccCC--CCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHh
Q 013505 342 LHTPESRKNFEKGIENIKSQGGKILTGGSVIES--EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418 (441)
Q Consensus 342 l~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n 418 (441)
++++.++++++++|++|+++|+++++||...+. .|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|
T Consensus 321 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n 400 (478)
T cd07086 321 LINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINN 400 (478)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999976443 5899999999 8999999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHhhh
Q 013505 419 SVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 419 ~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|||+++|||+|.+++++++
T Consensus 401 ~~~~gL~a~v~t~d~~~a~~~~ 422 (478)
T cd07086 401 DVPQGLSSSIFTEDLREAFRWL 422 (478)
T ss_pred CCCCcceEEEEcCCHHHHHHHH
Confidence 9999999999999999998875
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-91 Score=720.97 Aligned_cols=428 Identities=25% Similarity=0.384 Sum_probs=394.6
Q ss_pred HHHHHhccCCCCCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHH
Q 013505 8 YEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (441)
Q Consensus 8 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 86 (441)
++.++.+...+...++||+|+|+.++.+++++||+| |+++++++.++.+|+++++++|++||+.|+++|..+|.++|++
T Consensus 20 ~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~ 99 (522)
T cd07123 20 QEALAELKSLTVEIPLVIGGKEVRTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLK 99 (522)
T ss_pred HHHHHHHhhhccccCeeECCEEcCCCCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 446666666667788999999998778899999995 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-hHHHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEecc-ceEEEEcC
Q 013505 87 IGDALRE-KLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL-GVVGVITA 163 (441)
Q Consensus 87 ~a~~l~~-~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-Gvv~~i~p 163 (441)
+++.|++ ++++|++++++|+|||+.+++. ++...++.++|++...+...+.......++...++.++|+ |||++|+|
T Consensus 100 ~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~P 179 (522)
T cd07123 100 AADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSP 179 (522)
T ss_pred HHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECC
Confidence 9999996 8999999999999999999864 8889999999999887776544332222244567889998 99999999
Q ss_pred CCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEe
Q 013505 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSF 242 (441)
Q Consensus 164 ~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~f 242 (441)
||||+....+++++|| +||+||+|||+.+|+++..+ .++|.++|+|+|+||+|+| +.++++.|+.||+|++|+|
T Consensus 180 wNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l----~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~F 254 (522)
T cd07123 180 FNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLV----YKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHF 254 (522)
T ss_pred cccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHH----HHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEE
Confidence 9999999999999999 69999999999999999875 6678899999999999999 6678999999999999999
Q ss_pred eCChHHHHHHHHHhhccCC------ceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHH
Q 013505 243 TGSTKVGLMVQQTVHQRFG------KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316 (441)
Q Consensus 243 tGs~~~g~~i~~~a~~~~~------~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f 316 (441)
|||+.+|+.|++.++++++ ++++|||||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|
T Consensus 255 TGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f 334 (522)
T cd07123 255 TGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEV 334 (522)
T ss_pred ECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHH
Confidence 9999999999999998877 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHC-CCEEEecCcccCCCCceEeeEEE-EcCCCCCccc
Q 013505 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQ-GGKILTGGSVIESEGNFVQPTIV-EISPTADIVK 394 (441)
Q Consensus 317 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~ 394 (441)
+++|+++++++++|+|+|+++++||++++.++++++++|++++++ |+++++||......|+|++|||+ +++++|++++
T Consensus 335 ~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~ 414 (522)
T cd07123 335 KERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMT 414 (522)
T ss_pred HHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhh
Confidence 999999999999999999999999999999999999999999999 99999999764446899999999 8999999999
Q ss_pred cccccceEEEEEeCC--HHHHHHHHhcCC-CCcEEEEecCCHHHHHhhh
Q 013505 395 EELFAPVLYVMKFQT--FEEAVKINNSVP-QGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 395 eE~fgPv~~v~~~~~--~~eai~~~n~~~-~gl~asv~t~d~~~~~~~~ 440 (441)
||+||||++|++|+| ++|+|+++|++. |||++||||+|.+++++++
T Consensus 415 eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~ 463 (522)
T cd07123 415 EEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREAT 463 (522)
T ss_pred cCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHH
Confidence 999999999999995 799999999985 9999999999999988864
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-91 Score=721.18 Aligned_cols=415 Identities=27% Similarity=0.490 Sum_probs=390.2
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+. |+.++..+|.++|+++++.|+++++
T Consensus 58 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 137 (538)
T PLN02466 58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHND 137 (538)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46799999975 5788999999999999999999999999999999999974 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
+|++++++|+|||+.+++ .|+..+++.+++++.+.++..+..++.. .....+..++|+|||++|+|||||+...++++
T Consensus 138 ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i 216 (538)
T PLN02466 138 ELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 216 (538)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHHHH
Confidence 999999999999999996 5999999999999988877766544432 23345788999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.++++.|++||+|++|.||||+.+|+.|++
T Consensus 217 ~pALaaGN~VVlKPs~~tp~~~~~l----~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~ 292 (538)
T PLN02466 217 GPALACGNTIVLKTAEQTPLSALYA----AKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLE 292 (538)
T ss_pred hHHHHcCCEEEeECCCCCcHHHHHH----HHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999875 6678899999999999999 7788999999999999999999999999999
Q ss_pred Hhhc-cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 255 TVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 255 ~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.++++|+|.
T Consensus 293 ~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~ 372 (538)
T PLN02466 293 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPF 372 (538)
T ss_pred HHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCc
Confidence 9984 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHH
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~e 412 (441)
++++++||++++.++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+||
T Consensus 373 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~de 452 (538)
T PLN02466 373 KKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDE 452 (538)
T ss_pred cCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHH
Confidence 999999999999999999999999999999999999875556899999999 7999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 413 AVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 413 ai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||+++|+++|||+++|||+|.+++.+|+
T Consensus 453 Ai~~aN~~~~GL~a~VfT~d~~~a~~~~ 480 (538)
T PLN02466 453 VIRRANNTRYGLAAGVFTQNLDTANTLS 480 (538)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 9999999999999999999999998875
|
|
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-91 Score=720.72 Aligned_cols=428 Identities=26% Similarity=0.392 Sum_probs=396.8
Q ss_pred HHHHHhccCCCCCCCceecCeecc-CCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHH
Q 013505 8 YEFLSEIGLSPETPGCFVNGKWKA-HGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVR 85 (441)
Q Consensus 8 ~~~~~~~~~~~~~~~~~I~g~~~~-~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~ 85 (441)
+..++|+..++..+++||+|+|+. ++.+++++||.| |+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+
T Consensus 19 ~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~ 98 (533)
T TIGR01236 19 RAELKELKSHPIEIPLVIGGEEVMGSGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFL 98 (533)
T ss_pred HHHHHHHhhcCeeeceeECCEEecCCCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 356788888899999999999986 566899999997 899999999999999999999999999999999999999999
Q ss_pred HHHHHHH-hhHHHHHHHHHHHhCCChhhhhHH-HHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEecc-ceEEEEc
Q 013505 86 QIGDALR-EKLHHLGRLLSIEMGKILPEGIGE-VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL-GVVGVIT 162 (441)
Q Consensus 86 ~~a~~l~-~~~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-Gvv~~i~ 162 (441)
++++.|+ +++++|+++++.|+|||+.+++.+ +...++.+++++...+.+.+.......++...+..++|+ |||++|+
T Consensus 99 k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~ 178 (533)
T TIGR01236 99 KAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAIS 178 (533)
T ss_pred HHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEe
Confidence 9999999 599999999999999999999876 999999999999887776554331112344567889999 9999999
Q ss_pred CCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEE
Q 013505 163 AFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVS 241 (441)
Q Consensus 163 p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ 241 (441)
|||||+....+++++|| +||+||+|||+.+|+++..+ .++|.++|+|+|+||+|+| +.++++.|+.||+|++|+
T Consensus 179 PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l----~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~ 253 (533)
T TIGR01236 179 PFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLT----MRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIH 253 (533)
T ss_pred CCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHH----HHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEE
Confidence 99999999999999999 89999999999999999875 6678899999999999999 688999999999999999
Q ss_pred eeCChHHHHHHHHHhhccCCc------eeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHH
Q 013505 242 FTGSTKVGLMVQQTVHQRFGK------CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315 (441)
Q Consensus 242 ftGs~~~g~~i~~~a~~~~~~------~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~ 315 (441)
||||+.+|+.|++.++++++| +++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+
T Consensus 254 FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~ 333 (533)
T TIGR01236 254 FTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPR 333 (533)
T ss_pred EECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHH
Confidence 999999999999999988874 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCC--CEEEecCcccCCCCceEeeEEE-EcCCCCCc
Q 013505 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG--GKILTGGSVIESEGNFVQPTIV-EISPTADI 392 (441)
Q Consensus 316 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~G--a~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i 392 (441)
|+++|+++++++++|+|.++++++||++++.+++++.+++++++++| +++++||...+..|+|++|||+ +++++|++
T Consensus 334 f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i 413 (533)
T TIGR01236 334 FKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPL 413 (533)
T ss_pred HHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChh
Confidence 99999999999999999999999999999999999999999999987 7999999764446899999999 79999999
Q ss_pred cccccccceEEEEEeCCH--HHHHHHH-hcCCCCcEEEEecCCHHHHHhhh
Q 013505 393 VKEELFAPVLYVMKFQTF--EEAVKIN-NSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 393 ~~eE~fgPv~~v~~~~~~--~eai~~~-n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++||+||||++|++|+|. +|||+++ |+++|||+++|||+|.+++.+++
T Consensus 414 ~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~ 464 (533)
T TIGR01236 414 MVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEAD 464 (533)
T ss_pred hcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHH
Confidence 999999999999999994 9999999 88999999999999999998874
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-91 Score=716.19 Aligned_cols=415 Identities=25% Similarity=0.484 Sum_probs=387.0
Q ss_pred CceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH-hhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 22 ~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
++||||+|.. ++.+++++||+||+++++++.++.+|+++++++|++|++. |+++|..+|.++|+++++.|++++++|
T Consensus 1 ~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (477)
T cd07113 1 GHFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEEL 80 (477)
T ss_pred CCeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHH
Confidence 3699999976 4567999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCC-----CCceeEEEEeccceEEEEcCCCchHHhHH
Q 013505 99 GRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSER-----PNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 172 (441)
++++++|+|||..+++. |+..+++.+++++.+.+...+..++... .+...+.+++|+|||++|+|||||+...+
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 160 (477)
T cd07113 81 AQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAV 160 (477)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHH
Confidence 99999999999999985 9999999999999887766554332111 12345678999999999999999999999
Q ss_pred HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 173 ~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
+++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+|+..+++.|++||+|++|+||||+.+|+.|
T Consensus 161 ~~i~~ALaaGN~VvlKPs~~tp~~~~~l----~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i 236 (477)
T cd07113 161 WKIGAALATGCTIVIKPSEFTPLTLLRV----AELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKI 236 (477)
T ss_pred HHHHHHHHcCCEEEEECCCCCcHHHHHH----HHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 9999999999999999999999999875 677889999999999999933489999999999999999999999999
Q ss_pred HHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 253 ~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
.+.++++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 237 ~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 237 GRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
++++++|||++++.+++++.++|++|+++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|++
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d 396 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE 396 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence 9999999999999999999999999999999999999764446999999999 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||++||||+|.+++++++
T Consensus 397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~ 425 (477)
T cd07113 397 ELIQLINDTPFGLTASVWTNNLSKALRYI 425 (477)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999998874
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-90 Score=714.41 Aligned_cols=415 Identities=31% Similarity=0.503 Sum_probs=389.9
Q ss_pred CceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 22 ~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
++||||+|+. ++.+++++||+||+++++++.++.+|++.++++|++|++.|+.+|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999986 35789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhh
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 179 (441)
+++++|+|||+.+++.|+..+++.+++++...+...++..+...++...+..++|+|||++|+|||||+...++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 161 (478)
T cd07085 82 RLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAI 161 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877666555443222344567889999999999999999999999999999
Q ss_pred cCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc
Q 013505 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (441)
Q Consensus 180 aaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (441)
++||+||+|||+.+|+++..+ .++|.++|+|+|++|+++|+.+.+..|++||+|+.|+||||+.+|+.|++.++++
T Consensus 162 aaGN~VvlKps~~tp~~~~~l----~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~ 237 (478)
T cd07085 162 ACGNTFVLKPSERVPGAAMRL----AELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAAN 237 (478)
T ss_pred hcCCEEEEECCCcCcHHHHHH----HHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhc
Confidence 999999999999999999875 5667889999999999999777899999999999999999999999999999999
Q ss_pred CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCcc
Q 013505 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339 (441)
Q Consensus 260 ~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~ 339 (441)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++
T Consensus 238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~ 317 (478)
T cd07085 238 GKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADM 317 (478)
T ss_pred CCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHH
Q 013505 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (441)
Q Consensus 340 gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai 414 (441)
||++++.+++++.++|++++++|+++++||.... .+|+|++|||+ +++++|++++||+||||++|++|+|++|||
T Consensus 318 gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai 397 (478)
T cd07085 318 GPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAI 397 (478)
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHH
Confidence 9999999999999999999999999999997532 36899999999 799999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 415 KINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 415 ~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|+++|||++||||+|.++++++.
T Consensus 398 ~~~N~~~~gL~a~v~t~d~~~~~~~~ 423 (478)
T cd07085 398 AIINANPYGNGAAIFTRSGAAARKFQ 423 (478)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999874
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-90 Score=712.29 Aligned_cols=418 Identities=30% Similarity=0.519 Sum_probs=391.9
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHh-----HHhhCCCHHHHHHHHHHHHHHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS-----KIWMELPAPKRGEVVRQIGDAL 91 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l 91 (441)
+..++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++|| +.|+++|..+|.++|+++++.|
T Consensus 6 ~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l 85 (503)
T PLN02467 6 PRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKI 85 (503)
T ss_pred CccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHH
Confidence 3456899999986 46789999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCcccc-CC--CCCceeEEEEeccceEEEEcCCCchH
Q 013505 92 REKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SE--RPNHMMLETWNPLGVVGVITAFNFPC 168 (441)
Q Consensus 92 ~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~ 168 (441)
++++++|++++++|+|||+.+++.|+..+++.+++++...+.+.+.... .. ..+...+.+++|+|||++|+|||||+
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T PLN02467 86 TERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPL 165 (503)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHH
Confidence 9999999999999999999999999999999999999888877654321 11 11234678899999999999999999
Q ss_pred HhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChH
Q 013505 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTK 247 (441)
Q Consensus 169 ~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (441)
...++++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+.
T Consensus 166 ~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l----~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~ 241 (503)
T PLN02467 166 LMATWKVAPALAAGCTAVLKPSELASVTCLEL----ADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTA 241 (503)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcCcHHHHHH----HHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHH
Confidence 99999999999999999999999999999875 5678899999999999999 778899999999999999999999
Q ss_pred HHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhh
Q 013505 248 VGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQV 327 (441)
Q Consensus 248 ~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~ 327 (441)
+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++
T Consensus 242 ~g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 321 (503)
T PLN02467 242 TGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNI 321 (503)
T ss_pred HHHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccceEEE
Q 013505 328 KIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYV 404 (441)
Q Consensus 328 ~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v 404 (441)
++|+|.++++++||++++.+++++.++|++++.+|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|
T Consensus 322 ~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v 401 (503)
T PLN02467 322 KISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCV 401 (503)
T ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEE
Confidence 9999999999999999999999999999999999999999997633 35899999999 79999999999999999999
Q ss_pred EEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 405 MKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 405 ~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|+|.+|||+++|+++|||+++|||+|.++++++.
T Consensus 402 ~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 437 (503)
T PLN02467 402 KTFSTEDEAIELANDSHYGLAGAVISNDLERCERVS 437 (503)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999999999999999998874
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-90 Score=712.59 Aligned_cols=415 Identities=27% Similarity=0.464 Sum_probs=388.4
Q ss_pred CceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH-hhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 22 ~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
++||||+|+.++..++++||+||+++++++.++.+|+++++++|++||+. |+++|..+|.++|+++++.|+++.++|++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (481)
T TIGR03216 2 RNFINGAFVESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLA 81 (481)
T ss_pred CceECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 57999999887889999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred HHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCC---CceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 101 LLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERP---NHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
++++|+|||..+++. |+..+++.+++++...+...+...+...+ +...+.+++|+|||++|+|||||+...+++++
T Consensus 82 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~ 161 (481)
T TIGR03216 82 AEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVG 161 (481)
T ss_pred HHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHH
Confidence 999999999999964 99999999999998887665544332111 23456788999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CH-HHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
+||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+++| +. ++++.|..||+|+.|+||||+.+|+.|++
T Consensus 162 ~ALaaGN~vvlKPs~~tp~t~~~l----~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~ 237 (481)
T TIGR03216 162 PALACGNTVVVKPSEETPGTATLL----GEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMK 237 (481)
T ss_pred HHHHcCCEEEEECCccchHHHHHH----HHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 999999999999999999999875 6677899999999999998 55 58899999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.+
T Consensus 238 ~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 317 (481)
T TIGR03216 238 AAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDD 317 (481)
T ss_pred HHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC-----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeC
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~ 408 (441)
+++++||++++.++++++++|++|+++|+++++||...+ .+|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~ 397 (481)
T TIGR03216 318 PATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFD 397 (481)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeC
Confidence 999999999999999999999999999999999997532 36999999999 799999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 409 ~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|.+|||+++|+++|||++||||+|.++++++.
T Consensus 398 ~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~ 429 (481)
T TIGR03216 398 SEEEVIALANDTPYGLAASVWTEDLSRAHRVA 429 (481)
T ss_pred CHHHHHHHHhCCCccceEEEECCCHHHHHHHH
Confidence 99999999999999999999999999998874
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-90 Score=711.35 Aligned_cols=415 Identities=34% Similarity=0.598 Sum_probs=390.5
Q ss_pred CceecCeeccCCCeEeeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 22 GCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 22 ~~~I~g~~~~~~~~~~~~~P~-tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
++||||+|+.++..++++||. ||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|++
T Consensus 2 ~~~i~g~~~~~~~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (473)
T cd07097 2 RNYIDGEWVAGGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELAR 81 (473)
T ss_pred CceECCEEecCCCCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 579999998765568999999 5999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhc
Q 013505 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALa 180 (441)
++++|+|||..+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+...++++++||+
T Consensus 82 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALa 161 (473)
T cd07097 82 LLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALA 161 (473)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887766544333223445678899999999999999999999999999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (441)
+||+||+|||+.+|+++..+ .+++.++|+|+|++|+++| +.++++.|+.||+|+.|+||||+.+|+.|++.++++
T Consensus 162 aGN~VIlKps~~~p~~~~~l----~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~ 237 (473)
T cd07097 162 YGNTVVFKPAELTPASAWAL----VEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAAR 237 (473)
T ss_pred cCCEEEEeCCCCCcHHHHHH----HHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence 99999999999999999875 5678899999999999999 677999999999999999999999999999999999
Q ss_pred CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCcc
Q 013505 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339 (441)
Q Consensus 260 ~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~ 339 (441)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++.+++
T Consensus 238 ~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 317 (473)
T cd07097 238 GARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDI 317 (473)
T ss_pred CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHH
Q 013505 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (441)
Q Consensus 340 gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~ 416 (441)
|||+++.+++++.++|++|+++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++|||++
T Consensus 318 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 397 (473)
T cd07097 318 GPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAI 397 (473)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHH
Confidence 9999999999999999999999999999997643 35899999999 79999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEecCCHHHHHhhh
Q 013505 417 NNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 417 ~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+++|||+++|||+|.+++++++
T Consensus 398 ~n~~~~gL~~~v~t~d~~~a~~~~ 421 (473)
T cd07097 398 ANDTEFGLSAGIVTTSLKHATHFK 421 (473)
T ss_pred HhCCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999998874
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-90 Score=711.97 Aligned_cols=415 Identities=30% Similarity=0.531 Sum_probs=389.7
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+. |+.+|..+|.++|+++++.|+++++
T Consensus 4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07142 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 45799999975 5678999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
+|++++++|+|||..+++ .|+..+++.+++++.+.+...+..++.. .....+..++|+|||++|+|||||+...++++
T Consensus 84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 999999999999999986 4999999999999988777665544422 22345778999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|+.|+||||+.+|+.|++
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~ 238 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLA----AKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQ 238 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHH----HHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999875 6678899999999999999 7778999999999999999999999999999
Q ss_pred Hhhc-cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 255 TVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 255 ~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
.+++ +++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|.++++++++|+|+
T Consensus 239 ~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 318 (476)
T cd07142 239 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPF 318 (476)
T ss_pred HHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9986 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHH
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~e 412 (441)
++++++||++++.+++++.+++++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|++|
T Consensus 319 ~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07142 319 RKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDE 398 (476)
T ss_pred CCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHH
Confidence 999999999999999999999999999999999999875557899999999 8999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 413 AVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 413 ai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||+++|+++|||++||||+|.++++++.
T Consensus 399 ai~~~n~~~~gL~a~vft~d~~~a~~~~ 426 (476)
T cd07142 399 VIKRANNSKYGLAAGVFSKNIDTANTLS 426 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999999998874
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-90 Score=712.06 Aligned_cols=417 Identities=29% Similarity=0.541 Sum_probs=390.7
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|+++++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERND 84 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4567899999975 46889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
+|++++++|+|||..+++ .|+..+++.+++++...+...+...+.. .+...+.+++|+|||++|+|||||+...++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~ 163 (488)
T PRK13252 85 ELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACWKS 163 (488)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHH
Confidence 999999999999999997 4999999999999988877665543322 23456788999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (441)
++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+|+.+.++.|+.||+|+.|+||||+.+|+.|.+.
T Consensus 164 ~~ALaaGN~Vv~Kps~~~p~t~~~l----~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~ 239 (488)
T PRK13252 164 APALAAGNAMIFKPSEVTPLTALKL----AEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAA 239 (488)
T ss_pred HHHHhcCCeEEEeCCccCcHHHHHH----HHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999875 566788999999999999944589999999999999999999999999999
Q ss_pred hhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCC
Q 013505 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335 (441)
Q Consensus 256 a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 335 (441)
++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 240 aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 319 (488)
T PRK13252 240 AAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDP 319 (488)
T ss_pred HhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 336 GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 336 ~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
.+++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 320 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~ 399 (488)
T PRK13252 320 ATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDE 399 (488)
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCH
Confidence 99999999999999999999999999999999996532 35899999999 89999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|||+++|+++|||++||||+|.++++++.
T Consensus 400 ~eai~~~n~~~~gL~a~I~t~d~~~~~~~~ 429 (488)
T PRK13252 400 DEVIARANDTEYGLAAGVFTADLSRAHRVI 429 (488)
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHH
Confidence 999999999999999999999999998874
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-90 Score=705.75 Aligned_cols=413 Identities=29% Similarity=0.537 Sum_probs=386.5
Q ss_pred CceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 22 ~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 4799999975 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 100 RLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
++++.|+|||+.+++. |+..+++.+++++...+...+...+.. .+...+.+++|+|||++|+|||||+...++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999975 999999999999887766555433322 23356788999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhh
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (441)
|++||+||+|||+.+|.++..+++ ++.+ ++|+|++|+|+| +.++++.|+.||+++.|+||||+.+|+.|.+.++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~----~~~~-~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 235 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAK----IIQD-VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA 235 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHH----HHHH-hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999998755 4555 499999999999 7789999999999999999999999999999999
Q ss_pred ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCC
Q 013505 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (441)
Q Consensus 258 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 337 (441)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~ 315 (475)
T cd07117 236 KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDT 315 (475)
T ss_pred ccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHH
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~e 412 (441)
++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|.+|
T Consensus 316 ~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~e 395 (475)
T cd07117 316 QMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDE 395 (475)
T ss_pred cccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHH
Confidence 999999999999999999999999999999997643 35899999999 8999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 413 AVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 413 ai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||+++|+++|||++||||+|.+++.++.
T Consensus 396 ai~~~n~~~~gL~~~v~t~d~~~~~~~~ 423 (475)
T cd07117 396 VIDMANDSEYGLGGGVFTKDINRALRVA 423 (475)
T ss_pred HHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 9999999999999999999999998774
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-89 Score=707.15 Aligned_cols=414 Identities=27% Similarity=0.461 Sum_probs=385.2
Q ss_pred CceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 22 ~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
++||||+|+. ++.+++++||+||+++++++.++.+++++++++|++||+.|+++|..+|.++|+++++.|++++++|++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (487)
T PRK09457 2 TLWINGDWIAGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAE 81 (487)
T ss_pred CceECCEEecCCCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 4799999986 456799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhc
Q 013505 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALa 180 (441)
++++|+|||+.+++.|+..+++.+++++.......+..... .++...+.+++|+|||++|+|||||+...++++++||+
T Consensus 82 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 160 (487)
T PRK09457 82 VIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE-MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 160 (487)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887766554433321 23445678899999999999999999999999999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc-
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR- 259 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~- 259 (441)
+||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+|+.+.++.|+.||+|+.|+||||+.+|+.|++.++.+
T Consensus 161 aGN~VvlKPs~~tp~t~~~l----~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 161 AGNTVVFKPSELTPWVAELT----VKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred cCCEEEEECCCCCcHHHHHH----HHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99999999999999999875 5667889999999999999878999999999999999999999999999987754
Q ss_pred CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccH-HHHHHHHHHHHHhhccCCCC-CCCC
Q 013505 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY-QTVLDQLVDVYKQVKIGDPL-EKGT 337 (441)
Q Consensus 260 ~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~-~~~~ 337 (441)
.+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|+ ++.+
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~ 316 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQP 316 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCC
Confidence 567899999999999999999999999999999999999999999999999998 99999999999999999996 7889
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHH
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN 417 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~ 417 (441)
++||+++..+++++.+++++++++|+++++||...+.+|+|++|||++++++|++++||+||||++|++|+|+||||+++
T Consensus 317 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~ 396 (487)
T PRK09457 317 FMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLA 396 (487)
T ss_pred ccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999998765556899999999989999999999999999999999999999999
Q ss_pred hcCCCCcEEEEecCCHHHHHhhh
Q 013505 418 NSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 418 n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|||+++|||+|.+++++++
T Consensus 397 N~~~~gL~a~v~t~d~~~~~~~~ 419 (487)
T PRK09457 397 NNTRFGLSAGLLSDDREDYDQFL 419 (487)
T ss_pred hCCCCCceEEEEcCCHHHHHHHH
Confidence 99999999999999999998874
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-89 Score=706.72 Aligned_cols=413 Identities=30% Similarity=0.537 Sum_probs=387.5
Q ss_pred CceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 22 ~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++|+++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999975 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 100 RLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
+++++|+|||+.+++ .|+..+++.++++++..+...+...+.. .+...+..++|+|||++|+|||||+...++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEID-EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 999999999999997 4999999999999988776655443322 24456788999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhh
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (441)
|++||+||+|||+.+|+++..+++ ++.++ +|+|++|+|+| +.++++.|++||+|+.|+||||+.+|+.|++.++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~----l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLME----LIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA 235 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHH----HHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999988754 45554 99999999999 7889999999999999999999999999999999
Q ss_pred ccCCceeecCCCCCeEEEeCCC-----CHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 258 QRFGKCLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 258 ~~~~~~~lelgG~~~~iV~~da-----dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 236 ~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p 315 (480)
T cd07559 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNP 315 (480)
T ss_pred ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+++.+++||++++.+++++.++|++|+++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~ 395 (480)
T cd07559 316 LDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITF 395 (480)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEee
Confidence 99999999999999999999999999999999999997643 36899999999 78999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|||+++|+++|||+++|||+|.+++++++
T Consensus 396 ~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a 428 (480)
T cd07559 396 KDEEEAIAIANDTEYGLGGGVWTRDINRALRVA 428 (480)
T ss_pred CCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHH
Confidence 999999999999999999999999999998874
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=710.06 Aligned_cols=418 Identities=29% Similarity=0.564 Sum_probs=391.0
Q ss_pred CCCCCceecCeeccCCCeEeeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 18 PETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 18 ~~~~~~~I~g~~~~~~~~~~~~~P~-tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
....++||||+|+.++.++.++||+ ||+++++++.++.+|++.+++.|++|++.|+++|..+|.++|+++++.|+++++
T Consensus 30 ~~~~~~~i~g~~~~~~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 109 (511)
T TIGR01237 30 GKTYPLYINGEYVETENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRH 109 (511)
T ss_pred ccccceeECCEEecCCCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 4556789999998877789999999 599999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
+|++++++|+|||+.+++.|+..+++.+++++...+...+...+...++...+.+++|+|||++|+|||||+...+++++
T Consensus 110 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~ 189 (511)
T TIGR01237 110 ELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTV 189 (511)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999888776554332222344567889999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+++.|.||||+.+|+.|++.
T Consensus 190 ~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~ 265 (511)
T TIGR01237 190 APIVTGNCVVLKPAETSTVIAAKI----VEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYED 265 (511)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHH----HHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHH
Confidence 999999999999999999999875 5668889999999999999 78899999999999999999999999999998
Q ss_pred hh------ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhcc
Q 013505 256 VH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (441)
Q Consensus 256 a~------~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 329 (441)
++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 266 aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 266 AAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNV 345 (511)
T ss_pred HhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCC
Confidence 87 578999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeC
Q 013505 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (441)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~ 408 (441)
|+|.++.+++||++++.+.+++.+++++++++| ++++||......|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~ 424 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAA 424 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeC
Confidence 999999999999999999999999999999988 899998754446899999999 899999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 409 ~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|||+++|+++|||++||||+|.+++++++
T Consensus 425 ~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~ 456 (511)
T TIGR01237 425 DFDEALEIANGTEYGLTGGVYSNTRDHIERAA 456 (511)
T ss_pred CHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 99999999999999999999999999998874
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-89 Score=708.53 Aligned_cols=413 Identities=30% Similarity=0.541 Sum_probs=387.6
Q ss_pred CceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 22 ~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~ 81 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA 81 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5699999976 35789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhh-hhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSR-QLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
+++++|+|||+.+++.|+..+++.+++++...+ ...+...+.. ....+..++|+|||++|+|||||+...++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 159 (488)
T TIGR02299 82 VLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPVD--THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA 159 (488)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccCC--CceEEEEEEecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999999999999999999988776 3444433322 3345678999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhh
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (441)
|++||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa 235 (488)
T TIGR02299 160 LAFGNTVVLKPAEWSPLTAARL----AEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGA 235 (488)
T ss_pred HHcCCEEEEECchhchHHHHHH----HHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHH
Confidence 9999999999999999998764 6778999999999999998 7788999999999999999999999999999999
Q ss_pred ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCC
Q 013505 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (441)
Q Consensus 258 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 337 (441)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++.+
T Consensus 236 ~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~ 315 (488)
T TIGR02299 236 DTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPET 315 (488)
T ss_pred hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC-------CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-------SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-------~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
++||++++.+++++.++|++++++|+++++||...+ .+|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 316 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 395 (488)
T TIGR02299 316 EVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKD 395 (488)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCC
Confidence 999999999999999999999999999999997532 25899999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|||+++|+++|||++||||+|.+++++++
T Consensus 396 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~ 426 (488)
T TIGR02299 396 EEEAIEKANDTRYGLAGYVWTNDVGRAHRVA 426 (488)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999998874
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-89 Score=704.27 Aligned_cols=414 Identities=29% Similarity=0.507 Sum_probs=388.8
Q ss_pred CceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 22 ~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
++||||+|+. ++.+++++||+||+++++++.++.+++++++++|++|++.|+.+|..+|.++|+++++.|++++++|++
T Consensus 4 ~~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 83 (475)
T PRK13473 4 KLLINGELVAGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFAR 83 (475)
T ss_pred cceECCEEecCCCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999976 567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhh
Q 013505 101 LLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 179 (441)
++++|+|||..++. .|+..+++.+++++...+.+.+...+....+...+.+++|+|||++|+|||||+...++++++||
T Consensus 84 ~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~AL 163 (475)
T PRK13473 84 LESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPAL 163 (475)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999986 49999999999999887776654332222233457789999999999999999999999999999
Q ss_pred cCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhc
Q 013505 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (441)
Q Consensus 180 aaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (441)
++||+||+|||+.+|.++..+ .+++.++ +|+|++|+++| +.+.++.|++||+|+.|+||||+++|+.|.+.++.
T Consensus 164 aaGN~VIlKps~~~p~~~~~l----~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~ 238 (475)
T PRK13473 164 AAGNTVVLKPSEITPLTALKL----AELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238 (475)
T ss_pred hcCCEEEEECCCCChHHHHHH----HHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999876 5566778 99999999999 88899999999999999999999999999999999
Q ss_pred cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCc
Q 013505 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (441)
Q Consensus 259 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 338 (441)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++++
T Consensus 239 ~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~ 318 (475)
T PRK13473 239 SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTE 318 (475)
T ss_pred cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHCC-CEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHH
Q 013505 339 LGPLHTPESRKNFEKGIENIKSQG-GKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (441)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~G-a~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~ 416 (441)
+||++++.+++++.++|++++++| +++++||+..+..|+|++|||+ ++++++++++||+||||++|++|+|++|||++
T Consensus 319 ~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~ 398 (475)
T PRK13473 319 LGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRW 398 (475)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHH
Confidence 999999999999999999999999 9999999865446899999999 79999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEecCCHHHHHhhh
Q 013505 417 NNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 417 ~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+++|||++||||+|.+++.+++
T Consensus 399 ~N~~~~gL~a~v~t~d~~~~~~~~ 422 (475)
T PRK13473 399 ANDSDYGLASSVWTRDVGRAHRVS 422 (475)
T ss_pred HhCCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999998874
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-89 Score=704.30 Aligned_cols=416 Identities=30% Similarity=0.546 Sum_probs=389.9
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhhCCCHHHHHHHHHHHHHHHHhh
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREK 94 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 94 (441)
..++||||+|+. ++.+++++||+||+++++++.++.+++++++++|++|++ .|+++|.++|.++|+++++.|+++
T Consensus 6 ~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T cd07141 6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERD 85 (481)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHh
Confidence 346799999975 567899999999999999999999999999999999998 699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhh-hHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 95 LHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
.++|++++++|+|||..++ ..|+..+++.+++++...++..+...+.. .....+..++|+|||++|+|||||+...++
T Consensus 86 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 164 (481)
T cd07141 86 RAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAAW 164 (481)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHHHH
Confidence 9999999999999999766 46999999999999988887766544322 233467789999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+.+|+.|
T Consensus 165 ~~~~ALaaGN~VVlKps~~~p~~~~~l----~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i 240 (481)
T cd07141 165 KLAPALACGNTVVLKPAEQTPLTALYL----ASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLI 240 (481)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHH----HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 999999999999999999999999875 6678899999999999999 77889999999999999999999999999
Q ss_pred HHHhhc-cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCC
Q 013505 253 QQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (441)
Q Consensus 253 ~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 331 (441)
++.++. +++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 241 ~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~ 320 (481)
T cd07141 241 QQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGN 320 (481)
T ss_pred HHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence 999886 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
|+++++++||++++.+++++.++|++|+++|+++++||+..+..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 321 p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 400 (481)
T cd07141 321 PFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTI 400 (481)
T ss_pred CCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCH
Confidence 99999999999999999999999999999999999999875557899999999 89999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|||+++|+++|||++||||+|.+++++|+
T Consensus 401 ~eai~~~n~~~~gLs~~vft~d~~~a~~~~ 430 (481)
T cd07141 401 DEVIERANNTTYGLAAAVFTKDIDKAITFS 430 (481)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHH
Confidence 999999999999999999999999998874
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-89 Score=706.62 Aligned_cols=417 Identities=33% Similarity=0.574 Sum_probs=393.0
Q ss_pred CCCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 18 PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 18 ~~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...+++||||+|+.++.+++++||+| |+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|+++++
T Consensus 30 ~~~~~~~i~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 109 (512)
T cd07124 30 GREYPLVIGGKEVRTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRF 109 (512)
T ss_pred ccccceeECCEEecCCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 45678999999988778899999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
+|++++++|+|||+.+++.|+..+++.+++++...+...+...+.. ++...+..++|+|||++|+|||||+...+++++
T Consensus 110 ~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~ 188 (512)
T cd07124 110 ELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEMV-PGEDNRYVYRPLGVGAVISPWNFPLAILAGMTT 188 (512)
T ss_pred HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEecceEEEEECCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999998887755444322 344567889999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+++.|+||||+.+|+.|++.
T Consensus 189 ~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~ 264 (512)
T cd07124 189 AALVTGNTVVLKPAEDTPVIAAKL----VEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYER 264 (512)
T ss_pred HHHHcCCEEEEECCccccHHHHHH----HHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHH
Confidence 999999999999999999999875 6678899999999999999 77889999999999999999999999999999
Q ss_pred hhc------cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhcc
Q 013505 256 VHQ------RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (441)
Q Consensus 256 a~~------~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 329 (441)
+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 265 aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 344 (512)
T cd07124 265 AAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKV 344 (512)
T ss_pred HhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 886 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCC--CCceEeeEEE-EcCCCCCccccccccceEEEEE
Q 013505 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES--EGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (441)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~--~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~ 406 (441)
|+|.++++++||++++.+.+++.++|+++++ |+++++||...+. +|+|++|||+ +++++|++++||+||||++|++
T Consensus 345 g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 423 (512)
T cd07124 345 GDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIK 423 (512)
T ss_pred CCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEe
Confidence 9999999999999999999999999999998 8999999986442 6899999999 7999999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 424 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~ 457 (512)
T cd07124 424 AKDFDEALEIANDTEYGLTGGVFSRSPEHLERAR 457 (512)
T ss_pred cCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999998874
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-89 Score=705.90 Aligned_cols=416 Identities=30% Similarity=0.544 Sum_probs=389.3
Q ss_pred CCCCCceecCeeccCCCeEeeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 18 PETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 18 ~~~~~~~I~g~~~~~~~~~~~~~P~-tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
+...++||||+|+.++.+++++||+ ||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|+++++
T Consensus 34 ~~~~~~~i~g~~~~~~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 113 (514)
T PRK03137 34 GQDYPLIIGGERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKH 113 (514)
T ss_pred ccccceeECCEEecCCCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHH
Confidence 4566789999999877889999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhc-CccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN-GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
+|++++++|+|||+.+++.|+..+++.+++++...+.+. +..... .++...+.+++|+|||++|+|||||+...++++
T Consensus 114 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i 192 (514)
T PRK03137 114 EFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVES-RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMT 192 (514)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCceEEEEEecCcEEEEECCCccHHHHHHHHH
Confidence 999999999999999999999999999999998877654 322221 234456788999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+++| +.+.++.|++||+|+.|+||||+.+|+.|++
T Consensus 193 ~~ALaaGN~VVlKPs~~tp~~a~~l----~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~ 268 (514)
T PRK03137 193 LAAIVAGNTVLLKPASDTPVIAAKF----VEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYE 268 (514)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHH----HHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999875 5678899999999999999 6788999999999999999999999999999
Q ss_pred Hhhc------cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhc
Q 013505 255 TVHQ------RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328 (441)
Q Consensus 255 ~a~~------~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 328 (441)
.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 269 ~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~ 348 (514)
T PRK03137 269 RAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELT 348 (514)
T ss_pred HHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCC
Confidence 9886 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 329 ~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+|+|.++. ++||++++.+++++.++|++++++ +++++||...+..|+|++|||+ +++++|++++||+||||++|++|
T Consensus 349 ~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 426 (514)
T PRK03137 349 VGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKA 426 (514)
T ss_pred CCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEec
Confidence 99999998 999999999999999999999987 6999999764456999999999 89999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|||+++|+++|||++||||+|.+++++++
T Consensus 427 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~ 459 (514)
T PRK03137 427 KDFDHALEIANNTEYGLTGAVISNNREHLEKAR 459 (514)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 999999999999999999999999999998875
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-89 Score=696.96 Aligned_cols=401 Identities=25% Similarity=0.456 Sum_probs=376.8
Q ss_pred EeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH
Q 013505 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (441)
Q Consensus 36 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (441)
++++||+||+++++++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCC
Q 013505 116 EVQEVIDMCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTT 193 (441)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~ 193 (441)
|+..+++.+++++...++..+...... ......+++++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 999999999999988776544322111 122356788999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeE
Q 013505 194 PLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273 (441)
Q Consensus 194 p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~ 273 (441)
|+++..+ .+++.++|+|+|++|+|+++.+.+..|+.||++++|+||||+.+|+.|++.++++++|+++|+|||||+
T Consensus 163 p~~~~~l----~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~ 238 (457)
T PRK09406 163 PQTALYL----ADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPF 238 (457)
T ss_pred cHHHHHH----HHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCee
Confidence 9999865 667889999999999998755678899999999999999999999999999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHH
Q 013505 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK 353 (441)
Q Consensus 274 iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 353 (441)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+.+++++
T Consensus 239 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~ 318 (457)
T PRK09406 239 IVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEK 318 (457)
T ss_pred EECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCC
Q 013505 354 GIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432 (441)
Q Consensus 354 ~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d 432 (441)
+|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|
T Consensus 319 ~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 398 (457)
T PRK09406 319 QVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRD 398 (457)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 9999999999999999875557999999999 799999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh
Q 013505 433 PENIFKWL 440 (441)
Q Consensus 433 ~~~~~~~~ 440 (441)
.+.+++++
T Consensus 399 ~~~~~~~~ 406 (457)
T PRK09406 399 EAEQERFI 406 (457)
T ss_pred HHHHHHHH
Confidence 99998874
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-89 Score=697.22 Aligned_cols=403 Identities=26% Similarity=0.470 Sum_probs=376.9
Q ss_pred CCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhh
Q 013505 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE 112 (441)
Q Consensus 33 ~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 112 (441)
.++++++||+||+++++++.++.+|+++++++|++||+.|+++++.+|.++|+++++.|++|+++|++++++|+|||..+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCC
Q 013505 113 GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 192 (441)
Q Consensus 113 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~ 192 (441)
++.|+..+++.+++++...+...+..... .++...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~ 164 (462)
T PRK13968 86 ARAEVAKSANLCDWYAEHGPAMLKAEPTL-VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN 164 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcccc-CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 99999999999999998776654322111 23445678899999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCe
Q 013505 193 TPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272 (441)
Q Consensus 193 ~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~ 272 (441)
+|+++..+ .+++.++|+|+|++|+|+|+.+.+..|+.||+|+.|+||||+.+|+.|++.++++++|+++|+|||||
T Consensus 165 tp~~~~~l----~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p 240 (462)
T PRK13968 165 VMGCAQLI----AQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDP 240 (462)
T ss_pred ChHHHHHH----HHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCc
Confidence 99998764 67788999999999999984344566999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHH
Q 013505 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFE 352 (441)
Q Consensus 273 ~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~ 352 (441)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.
T Consensus 241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~ 320 (462)
T PRK13968 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELH 320 (462)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecC
Q 013505 353 KGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431 (441)
Q Consensus 353 ~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~ 431 (441)
+++++++.+|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+
T Consensus 321 ~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~ 400 (462)
T PRK13968 321 HQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTT 400 (462)
T ss_pred HHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcC
Confidence 99999999999999999764445899999999 89999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhhh
Q 013505 432 SPENIFKWL 440 (441)
Q Consensus 432 d~~~~~~~~ 440 (441)
|.+.+++++
T Consensus 401 d~~~a~~~~ 409 (462)
T PRK13968 401 DETQARQMA 409 (462)
T ss_pred CHHHHHHHH
Confidence 999998874
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-88 Score=698.23 Aligned_cols=415 Identities=31% Similarity=0.528 Sum_probs=387.8
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-Hhh-CCCHHHHHHHHHHHHHHHHhhHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWM-ELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
.++||||+|+. ++..+.++||+||+++++++.++.+|+++++++|++||+ .|+ .+|..+|.++|+++++.|+++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999976 457899999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhh-hHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
+|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+.. .+...+..++|+|||++|+|||||+...++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999765 56999999999999998877655543322 33456778999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+++.|.||||+.+|+.|++
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l----~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~ 241 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYM----TKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVME 241 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHH----HHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHH
Confidence 9999999999999999999998865 6678899999999999999 6788999999999999999999999999999
Q ss_pred Hhhc-cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 255 TVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 255 ~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
.+++ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 242 ~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~ 321 (481)
T cd07143 242 AAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPF 321 (481)
T ss_pred HHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCC
Confidence 9884 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHH
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~e 412 (441)
++++++||++++.+++++.++|++++++|+++++||......|+|++|||+ +++++|++++||+||||++|++|+|.+|
T Consensus 322 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 401 (481)
T cd07143 322 AEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEE 401 (481)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHH
Confidence 999999999999999999999999999999999999865446899999999 8999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 413 AVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 413 ai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||+++|+++|||++||||+|.+++.+|+
T Consensus 402 ai~~~n~~~~gL~~~v~t~d~~~~~~~~ 429 (481)
T cd07143 402 AIKRANDSTYGLAAAVFTNNINNAIRVA 429 (481)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999999988874
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-88 Score=701.68 Aligned_cols=427 Identities=29% Similarity=0.498 Sum_probs=397.4
Q ss_pred HHHHhccCC-CCCCCceecCeeccCCCeEeeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHH
Q 013505 9 EFLSEIGLS-PETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (441)
Q Consensus 9 ~~~~~~~~~-~~~~~~~I~g~~~~~~~~~~~~~P~-tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 86 (441)
+++..++.. +..+++||+|+|+.++..+.++||. ||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|++
T Consensus 6 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 85 (500)
T cd07083 6 EALRRVKEEFGRAYPLVIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLK 85 (500)
T ss_pred HHHHHHHhhccccccceECCEEecCCCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 556666665 6778899999998877889999997 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCcccc-CCCCCceeEEEEeccceEEEEcCCC
Q 013505 87 IGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SERPNHMMLETWNPLGVVGVITAFN 165 (441)
Q Consensus 87 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n 165 (441)
+++.|++++++|+++++.|+|||+.++..|+..+++.++++++.+....+.... ...++...+..++|+|||++|+|||
T Consensus 86 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N 165 (500)
T cd07083 86 AADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWN 165 (500)
T ss_pred HHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCc
Confidence 999999999999999999999999999999999999999999888776554321 1123445677899999999999999
Q ss_pred chHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeC
Q 013505 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (441)
Q Consensus 166 ~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (441)
||+...++++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|+.|+|||
T Consensus 166 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftG 241 (500)
T cd07083 166 FPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKV----FEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTG 241 (500)
T ss_pred cHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHH----HHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEEC
Confidence 99999999999999999999999999999999876 5667889999999999999 788999999999999999999
Q ss_pred ChHHHHHHHHHhhccC------CceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHH
Q 013505 245 STKVGLMVQQTVHQRF------GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (441)
Q Consensus 245 s~~~g~~i~~~a~~~~------~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (441)
|+.+|+.|++.+++++ +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 242 s~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~ 321 (500)
T cd07083 242 SLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLE 321 (500)
T ss_pred cHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHH
Confidence 9999999999998876 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCcccccc
Q 013505 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEEL 397 (441)
Q Consensus 319 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~ 397 (441)
+|+++++++++|+|.++++++||++++.+.+++++++++++++| ++++||...+..|+|++|||+ +++++|++++||+
T Consensus 322 ~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~ 400 (500)
T cd07083 322 RLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEI 400 (500)
T ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCC
Confidence 99999999999999999999999999999999999999999887 999999765556899999999 7999999999999
Q ss_pred ccceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 398 FAPVLYVMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 398 fgPv~~v~~~~--~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||||++|++|+ |++|||+++|+++|||+++|||+|.+++.++.
T Consensus 401 FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~ 445 (500)
T cd07083 401 FGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEAR 445 (500)
T ss_pred CCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHH
Confidence 99999999999 99999999999999999999999999998874
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-88 Score=698.48 Aligned_cols=412 Identities=32% Similarity=0.597 Sum_probs=388.3
Q ss_pred eecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013505 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (441)
Q Consensus 24 ~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (441)
||+|+|+. ++.++.++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999985 4688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhh-hHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhc
Q 013505 102 LSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (441)
Q Consensus 102 ~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALa 180 (441)
+++|+|||..++ ..|+..+++.+++++...++..+...+...+ ...+..++|+|||++|+|||||+...++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIP-SFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCC-ceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 6799999999999998887766554433222 34578899999999999999999999999999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (441)
+||+||+|||+.+|.++..+ .++|.++|+|+|++|+++| +.+.++.|+.||+|++|+||||+.+|+.|.+.++++
T Consensus 160 aGN~VvlKps~~tp~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~ 235 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKV----AELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADH 235 (467)
T ss_pred cCCEEEeeCCccCcHHHHHH----HHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999875 5678899999999999999 588999999999999999999999999999999999
Q ss_pred CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCcc
Q 013505 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339 (441)
Q Consensus 260 ~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~ 339 (441)
++++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++
T Consensus 236 l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 315 (467)
T TIGR01804 236 LKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEM 315 (467)
T ss_pred CCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHH
Q 013505 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (441)
Q Consensus 340 gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai 414 (441)
||++++.+.+++.+++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++|||
T Consensus 316 gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai 395 (467)
T TIGR01804 316 GPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVI 395 (467)
T ss_pred CccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHH
Confidence 9999999999999999999999999999997643 25899999999 799999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 415 KINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 415 ~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|+++|||++||||+|.+++++|.
T Consensus 396 ~~~n~~~~gLsa~i~t~d~~~~~~~~ 421 (467)
T TIGR01804 396 ARANDTIYGLAAGVFTADLGRAHRVA 421 (467)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999998875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-89 Score=695.88 Aligned_cols=399 Identities=32% Similarity=0.551 Sum_probs=377.0
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (441)
++||+||+++++++.++.++++.++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhH
Q 013505 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (441)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~ 197 (441)
..+++.+++++...++..+...+....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999999877776655444332344556778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEecCC--HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEE
Q 013505 198 IAITKLVSEVFERNKLPGAIFTSFCGG--AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (441)
Q Consensus 198 ~~l~~li~~~l~~aglP~gvv~~v~g~--~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV 275 (441)
..+ .++|.++|+|+|++|+|+|+ .+.++.|++||++++|+||||+.+|+.|++.++.+++|+++|+|||||+||
T Consensus 161 ~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 161 LAL----ARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIV 236 (448)
T ss_pred HHH----HHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEE
Confidence 875 56678999999999999984 678999999999999999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 276 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
++|+|++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.++|
T Consensus 237 ~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i 316 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHI 316 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013505 356 ENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~ 434 (441)
++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 317 ~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~ 396 (448)
T TIGR01780 317 ADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLA 396 (448)
T ss_pred HHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHH
Confidence 99999999999999765456899999999 79999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 013505 435 NIFKWL 440 (441)
Q Consensus 435 ~~~~~~ 440 (441)
+++++.
T Consensus 397 ~~~~~~ 402 (448)
T TIGR01780 397 TIWRVA 402 (448)
T ss_pred HHHHHH
Confidence 998864
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-88 Score=696.51 Aligned_cols=419 Identities=31% Similarity=0.537 Sum_probs=394.2
Q ss_pred hHHHHHhccCCCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHH
Q 013505 7 EYEFLSEIGLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVV 84 (441)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L 84 (441)
..-+++|+.++....++||+|+|+. ++++++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L 87 (480)
T cd07111 8 AACALAWLDAHDRSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHL 87 (480)
T ss_pred HHHHHHHhhhccccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence 3457899999999999999999986 45789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcC
Q 013505 85 RQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (441)
Q Consensus 85 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 163 (441)
+++++.|++++++|++++++|+|||+.+++. |+...++.+++++.+.+...+ .+..++|+|||++|+|
T Consensus 88 ~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~P 156 (480)
T cd07111 88 YRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVP 156 (480)
T ss_pred HHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECC
Confidence 9999999999999999999999999999974 999999999988777664421 1234789999999999
Q ss_pred CCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEee
Q 013505 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243 (441)
Q Consensus 164 ~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ft 243 (441)
||||+...++++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+|+.+.+..|+.||+++.|+||
T Consensus 157 wN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ft 232 (480)
T cd07111 157 WNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLF----AEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFT 232 (480)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEE
Confidence 9999999999999999999999999999999999875 567889999999999999955789999999999999999
Q ss_pred CChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHH
Q 013505 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (441)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 323 (441)
||+.+|+.|.+.++++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++
T Consensus 233 Gs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~ 312 (480)
T cd07111 233 GSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKER 312 (480)
T ss_pred CCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceE
Q 013505 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402 (441)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~ 402 (441)
++++++|+|+++++++||++++.+.+++.++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||+
T Consensus 313 ~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl 392 (480)
T cd07111 313 MSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVL 392 (480)
T ss_pred HHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCee
Confidence 9999999999999999999999999999999999999999999998754456899999999 799999999999999999
Q ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 403 ~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|+|++|||+++|+++|||+++|||+|.+++.++.
T Consensus 393 ~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~ 430 (480)
T cd07111 393 VVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVA 430 (480)
T ss_pred EeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 99999999999999999999999999999999988764
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-88 Score=697.80 Aligned_cols=411 Identities=30% Similarity=0.496 Sum_probs=381.4
Q ss_pred CceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 22 ~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
++||||+|+. ++.+++++||+||+++++++.++.+|++.++++|++||+.|+.+|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLA 81 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999975 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 100 RLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
++++.|+|||+.++. .|+..+++.++++++..+...+...+. .++...+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 160 (479)
T cd07116 82 VAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPA 160 (479)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 999999999999997 499999999999998877665543332 133356788999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhh
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (441)
|++||+||+|||+.+|+++..++++ +.++ +|+|++|+|+| +.+.+..|+.||+|++|+||||+.+|+.|++.++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l----~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 235 (479)
T cd07116 161 LAAGNCVVLKPAEQTPASILVLMEL----IGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235 (479)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHH----HHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999987554 5555 99999999999 7889999999999999999999999999999999
Q ss_pred ccCCceeecCCCCCeEEEeCC------CCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCC
Q 013505 258 QRFGKCLLELSGNNAIIIMDD------ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (441)
Q Consensus 258 ~~~~~~~lelgG~~~~iV~~d------adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 331 (441)
++++|+++|+|||||+||++| ||++.|++.++++. +|+||.|++++|||||+++||+|+++|.++++++++|+
T Consensus 236 ~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~ 314 (479)
T cd07116 236 ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGN 314 (479)
T ss_pred cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999998 79999999999865 59999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEE
Q 013505 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (441)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~ 406 (441)
|+++.+.+||++++.+.++++++|++++++|+++++||...+ ..|+|++|||+ ++ ++|++++||+||||++|++
T Consensus 315 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~-~~~~~~~eE~FGPVl~v~~ 393 (479)
T cd07116 315 PLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGG-NKMRIFQEEIFGPVLAVTT 393 (479)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccC-CCChhhhcCCcCceEEEEE
Confidence 999999999999999999999999999999999999997632 25899999999 55 5999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|++|||+++|+++|||+++|||+|.+++++|+
T Consensus 394 ~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~ 427 (479)
T cd07116 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMG 427 (479)
T ss_pred eCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999998874
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-88 Score=697.69 Aligned_cols=413 Identities=34% Similarity=0.608 Sum_probs=389.7
Q ss_pred eecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013505 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (441)
Q Consensus 24 ~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (441)
||||+|+. ++..++++||.||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 68999975 5688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcC
Q 013505 102 LSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVC 181 (441)
Q Consensus 102 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaa 181 (441)
+++|+|||..+++.|+..+++.+++++.+.++..+...+...++...+.+++|+|||++|+|||||+...++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999988877665544432234456778999999999999999999999999999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccC
Q 013505 182 GNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260 (441)
Q Consensus 182 GN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~ 260 (441)
||+||+|||+.+|.++..+ .++|.++|+|+|++|+++| +.+.++.|+.||++++|.||||+.+|+.|++.+++++
T Consensus 161 GN~VVlKps~~~p~~~~~l----~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 236 (468)
T cd07088 161 GNTIVIKPSEETPLNALEF----AELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENI 236 (468)
T ss_pred CCEEEEECCCcchHHHHHH----HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 9999999999999999875 5667889999999999999 6678899999999999999999999999999999999
Q ss_pred CceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccC
Q 013505 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLG 340 (441)
Q Consensus 261 ~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~g 340 (441)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++.+|
T Consensus 237 ~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 316 (468)
T cd07088 237 TKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMG 316 (468)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHCCCEEEecCcccC-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHh
Q 013505 341 PLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418 (441)
Q Consensus 341 pl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n 418 (441)
|++++.+++++.+++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|
T Consensus 317 pli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 396 (468)
T cd07088 317 PLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAN 396 (468)
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHh
Confidence 999999999999999999999999999997643 36899999999 7899999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHhhh
Q 013505 419 SVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 419 ~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|||++||||+|.+++++|.
T Consensus 397 ~~~~gL~~~v~t~d~~~~~~~~ 418 (468)
T cd07088 397 DSEYGLTSYIYTENLNTAMRAT 418 (468)
T ss_pred CCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999875
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-88 Score=698.06 Aligned_cols=417 Identities=30% Similarity=0.574 Sum_probs=389.3
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH-hhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
...++||||+|.. ++.++.++||+||+++++++.++.+|+++++++|++|++. |+.+|.++|.++|+++++.|++++
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~ 85 (484)
T cd07144 6 QPTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNR 85 (484)
T ss_pred cCcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3456899999976 4578999999999999999999999999999999999996 889999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhh-hHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+.. ++...+..++|+|||++|+|||||+.+.+++
T Consensus 86 ~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~ 164 (484)
T cd07144 86 DLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWK 164 (484)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHHHHH
Confidence 999999999999998775 67999999999999998887765544322 3445678899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+++.|.||||+.+|+.|+
T Consensus 165 ~~~ALaaGN~VV~Kps~~~p~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~ 240 (484)
T cd07144 165 LAPALAAGNTVVIKPAENTPLSLLYF----ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVM 240 (484)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHH----HHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999875 6678899999999999999 778999999999999999999999999999
Q ss_pred HHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHh-hccCCC
Q 013505 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ-VKIGDP 332 (441)
Q Consensus 254 ~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p 332 (441)
+.++++++|+++|+|||||+||++|||++.|++.+++|+|+|+||.|++++|||||+++||+|+++|++++++ +++|+|
T Consensus 241 ~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p 320 (484)
T cd07144 241 KAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSP 320 (484)
T ss_pred HHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 899999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC---CCCceEeeEEE-EcCCCCCccccccccceEEEEEeC
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~ 408 (441)
+++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 321 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 400 (484)
T cd07144 321 FDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFK 400 (484)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccC
Confidence 99999999999999999999999999999999999997643 36899999999 799999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 409 ~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|||+++|+++|||++||||+|.+++.+|.
T Consensus 401 ~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~ 432 (484)
T cd07144 401 TYEEAIKKANDTTYGLAAAVFTKDIRRAHRVA 432 (484)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999999998874
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-88 Score=697.07 Aligned_cols=416 Identities=31% Similarity=0.529 Sum_probs=389.0
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHhhH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIW--MELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
..++||||+|.. ++..++++||+||+++++++.++.+|++.++++|++|++.| +.+|.++|.++|+++++.|++++
T Consensus 3 ~~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07091 3 PTGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDR 82 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 357899999975 56789999999999999999999999999999999999985 49999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhh-hHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+..++|+|||++|+|||||+...+++
T Consensus 83 ~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (476)
T cd07091 83 DELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWK 161 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHH
Confidence 999999999999998665 46999999999999988777655544322 3445678899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+|+.|+
T Consensus 162 ~~~AL~aGN~VvlKps~~~p~~~~~l----~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~ 237 (476)
T cd07091 162 LAPALAAGNTVVLKPAEQTPLSALYL----AELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIM 237 (476)
T ss_pred HHHHHHcCCEEEEeCCCCChHHHHHH----HHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999875 5667889999999999999 778899999999999999999999999999
Q ss_pred HHhhc-cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 254 QTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 254 ~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
+.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 238 ~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p 317 (476)
T cd07091 238 EAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDP 317 (476)
T ss_pred HHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCC
Confidence 99987 88999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
+++++++||++++.+++++.+++++++.+|+++++||......|+|++|||+ +++++|++++||+||||++|++|+|++
T Consensus 318 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07091 318 FDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTED 397 (476)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHH
Confidence 9999999999999999999999999999999999999875557899999999 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||+++|||+|.+++++++
T Consensus 398 eai~~~n~~~~gLsa~v~t~d~~~~~~~~ 426 (476)
T cd07091 398 EVIERANDTEYGLAAGVFTKDINKALRVS 426 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999998874
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-88 Score=695.65 Aligned_cols=413 Identities=29% Similarity=0.469 Sum_probs=383.3
Q ss_pred ceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Q 013505 23 CFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL 101 (441)
Q Consensus 23 ~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 101 (441)
+||+|+|+. ++++++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|+++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~ 80 (484)
T TIGR03240 1 LFIDGKWRAGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARV 80 (484)
T ss_pred CeECCEEecCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 489999976 4678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcC
Q 013505 102 LSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVC 181 (441)
Q Consensus 102 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaa 181 (441)
+++|+|||..++..|+..+++.+++++.......+..... .++...+..++|+|||++|+|||||+...++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaa 159 (484)
T TIGR03240 81 IARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP-MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 159 (484)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHc
Confidence 9999999999999999999999998887766554443221 233456778899999999999999999999999999999
Q ss_pred CCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc-C
Q 013505 182 GNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR-F 260 (441)
Q Consensus 182 GN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~-~ 260 (441)
||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|+.||+|+.|+||||+++|+.|++.++.+ .
T Consensus 160 GN~VVlKPs~~tp~t~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 160 GNTVVFKPSELTPWVAEET----VKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred CCEEEEECCccccHHHHHH----HHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 9999999999999999876 5667889999999999999778899999999999999999999999999987754 5
Q ss_pred CceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccH-HHHHHHHHHHHHhhccCCC-CCCCCc
Q 013505 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIY-QTVLDQLVDVYKQVKIGDP-LEKGTL 338 (441)
Q Consensus 261 ~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p-~~~~~~ 338 (441)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.+.++++++|+| .++.++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~ 315 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPF 315 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 78999999999999999999999999999999999999999999999999985 9999999999999999997 577889
Q ss_pred cCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHh
Q 013505 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINN 418 (441)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n 418 (441)
+||++++.+++++.+++++++++|+++++||...+.+|+|++|||++++++|++++||+||||++|++|+|++|||+++|
T Consensus 316 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n 395 (484)
T TIGR03240 316 MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIAN 395 (484)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999999887545568999999998889999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHhhh
Q 013505 419 SVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 419 ~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|||+++|||+|.+++++++
T Consensus 396 ~~~~gL~~~v~t~d~~~a~~~~ 417 (484)
T TIGR03240 396 NTRFGLSAGLLSDDRELYDRFL 417 (484)
T ss_pred CCCCCceEEEEcCCHHHHHHHH
Confidence 9999999999999999999875
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-88 Score=694.71 Aligned_cols=414 Identities=27% Similarity=0.468 Sum_probs=388.9
Q ss_pred CceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 22 GCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 22 ~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
++||||+|+. +++.++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999975 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhh
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 179 (441)
++++.|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+...++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877776655443222344556789999999999999999999999999999
Q ss_pred cCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc
Q 013505 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (441)
Q Consensus 180 aaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (441)
++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+|+.+.++.|+.||+|+.|+||||+.+|+.|.+.++.+
T Consensus 162 aaGN~VilKps~~~p~~~~~l----~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~ 237 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKL----AELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAH 237 (477)
T ss_pred hcCCEEEeeCcccChHHHHHH----HHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhc
Confidence 999999999999999999875 6778899999999999999777899999999999999999999999999999999
Q ss_pred CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCcc
Q 013505 260 FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339 (441)
Q Consensus 260 ~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~ 339 (441)
+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|+++++++++|+|.+++++|
T Consensus 238 ~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~ 316 (477)
T TIGR01722 238 GKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEM 316 (477)
T ss_pred CCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHCCCEEEecCccc--C--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHH
Q 013505 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVI--E--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (441)
Q Consensus 340 gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~--~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai 414 (441)
||++++.+++++.++|++|+++|+++++||... + .+|+|++|||+ +++++|.+++||+||||++|++|+|++|||
T Consensus 317 Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai 396 (477)
T TIGR01722 317 GPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAI 396 (477)
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHH
Confidence 999999999999999999999999999999752 1 35899999999 899999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 415 KINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 415 ~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|+++|||++||||+|.+.+++|.
T Consensus 397 ~~~n~~~~gl~~~v~t~d~~~~~~~~ 422 (477)
T TIGR01722 397 ALINASPYGNGTAIFTRDGAAARRFQ 422 (477)
T ss_pred HHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 99999999999999999999998874
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-88 Score=693.45 Aligned_cols=408 Identities=31% Similarity=0.545 Sum_probs=383.1
Q ss_pred Ceecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 013505 27 GKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSI 104 (441)
Q Consensus 27 g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~ 104 (441)
|+|+. ++..++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56654 3567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCE
Q 013505 105 EMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNC 184 (441)
Q Consensus 105 e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~ 184 (441)
|+|||+.++..|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+...++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999988777665544432234456778999999999999999999999999999999999
Q ss_pred EEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCce
Q 013505 185 VVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (441)
Q Consensus 185 VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (441)
||+|||+.+|.++.. +|.+++.++|+|+|++|+|+| +.+++..|++||.+++|.||||+.+|+.|++.++++++|+
T Consensus 161 Vi~Kps~~~p~~~~~---~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~ 237 (465)
T cd07151 161 VVLKPASDTPITGGL---LLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKV 237 (465)
T ss_pred EEEECCCCCcHhHHH---HHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcE
Confidence 999999999998632 357889999999999999998 7788999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCC
Q 013505 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343 (441)
Q Consensus 264 ~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~ 343 (441)
++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++.+||++
T Consensus 238 ~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli 317 (465)
T cd07151 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLI 317 (465)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCC
Q 013505 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422 (441)
Q Consensus 344 ~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~ 422 (441)
++.+++++.+++++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 318 ~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~ 394 (465)
T cd07151 318 NESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEY 394 (465)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCc
Confidence 9999999999999999999999999964 5899999999 79999999999999999999999999999999999999
Q ss_pred CcEEEEecCCHHHHHhhh
Q 013505 423 GLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 423 gl~asv~t~d~~~~~~~~ 440 (441)
||++||||+|.++++++.
T Consensus 395 gL~a~v~t~d~~~a~~~~ 412 (465)
T cd07151 395 GLSGAVFTSDLERGVQFA 412 (465)
T ss_pred cceEEEECCCHHHHHHHH
Confidence 999999999999998874
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-88 Score=697.63 Aligned_cols=412 Identities=35% Similarity=0.579 Sum_probs=387.5
Q ss_pred eecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 24 ~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
||||+|.. ++.+++++||+||+++++++.++.+|++++++.|++|++ .|+.+|..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 68999975 467899999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhh
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 179 (441)
+++++|+|||..+++.|+..+++.+++++...++..+...+.. ++...+..++|+|||++|+|||||+...++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988877655443322 344567889999999999999999999999999999
Q ss_pred cCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhc
Q 013505 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (441)
Q Consensus 180 aaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (441)
++||+||+|||+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|++||++++|.||||+.+|+.|++.+++
T Consensus 160 aaGN~VilKps~~~p~~~~~l----~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~ 235 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIAL----FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG 235 (482)
T ss_pred hcCCEEEEECCccccHHHHHH----HHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHh
Confidence 999999999999999999875 5667889999999999998 66789999999999999999999999999999999
Q ss_pred cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCc
Q 013505 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (441)
Q Consensus 259 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 338 (441)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 236 ~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~ 315 (482)
T cd07119 236 NVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTE 315 (482)
T ss_pred cCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
+||++++.+++++++++++++++|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+|++||
T Consensus 316 ~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~dea 395 (482)
T cd07119 316 MGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEA 395 (482)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHH
Confidence 99999999999999999999999999999997533 25899999999 79999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||++||||+|.+++++|+
T Consensus 396 i~~~n~~~~gL~~~v~t~d~~~~~~~~ 422 (482)
T cd07119 396 IRLANDTPYGLAGAVWTKDIARANRVA 422 (482)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999999998874
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-88 Score=694.82 Aligned_cols=414 Identities=38% Similarity=0.684 Sum_probs=388.8
Q ss_pred ceecCeecc--CCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 23 CFVNGKWKA--HGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 23 ~~I~g~~~~--~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
+||||+|+. ++.+++++||+| ++++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999975 468899999999 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhh
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 179 (441)
+++++|+|||+.+++.|+..+++.+++++...+...+...+...++...+.+++|+|||++|+|||||+...++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887776555443322334567889999999999999999999999999999
Q ss_pred cCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhc
Q 013505 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (441)
Q Consensus 180 aaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (441)
++||+||+|||+.+|+++..+ .++|.++|+|+|++|+++| +.++++.|+.||+|+.|+||||+.+|+.|++.+++
T Consensus 161 aaGN~VvlKps~~~p~~~~~l----~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~ 236 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKL----VELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCAR 236 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHH----HHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999875 6678899999999999999 66799999999999999999999999999999999
Q ss_pred cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCc
Q 013505 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (441)
Q Consensus 259 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 338 (441)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 237 ~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 316 (478)
T cd07131 237 PNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETD 316 (478)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
+||++++.+.+++.+++++|+++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++||
T Consensus 317 ~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea 396 (478)
T cd07131 317 MGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEA 396 (478)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999997643 36899999999 78999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||+++|||+|.+++++|.
T Consensus 397 i~~~n~~~~gL~~~v~t~d~~~a~~~~ 423 (478)
T cd07131 397 IEIANDTEYGLSSAIYTEDVNKAFRAR 423 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHH
Confidence 999999999999999999999998874
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-88 Score=692.65 Aligned_cols=409 Identities=28% Similarity=0.490 Sum_probs=384.3
Q ss_pred ceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 23 CFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 23 ~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
+||||+|+. ++.+++++||.||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 489999986 357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhh
Q 013505 101 LLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 179 (441)
++++|+|||..++. .|+...++.+++++...+.+..... ....+..++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 99999999999886 4899999999999987766543321 23456789999999999999999999999999999
Q ss_pred cCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhc
Q 013505 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (441)
Q Consensus 180 aaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (441)
++||+||+|||+.+|+++..+ .++|.++|+|+|++|+++| +.++++.|+.||+++.|.||||+.+|+.|.+.++.
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l----~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 231 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIIL----AEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHH----HHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 999999999999999999875 6778899999999999998 67789999999999999999999999999999999
Q ss_pred cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCc
Q 013505 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTL 338 (441)
Q Consensus 259 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~ 338 (441)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||++++++
T Consensus 232 ~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 311 (466)
T cd07138 232 TVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATT 311 (466)
T ss_pred cCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC---CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHH
Q 013505 339 LGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAV 414 (441)
Q Consensus 339 ~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai 414 (441)
+||++++.+.+++.+++++++++|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+|.+|||
T Consensus 312 ~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai 391 (466)
T cd07138 312 LGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAI 391 (466)
T ss_pred CCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHH
Confidence 99999999999999999999999999999996422 35899999999 899999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 415 KINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 415 ~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|+++|||+++|||+|.++++++.
T Consensus 392 ~~~n~~~~gL~a~i~t~d~~~a~~~~ 417 (466)
T cd07138 392 AIANDTPYGLAGYVWSADPERARAVA 417 (466)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 99999999999999999999998874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-88 Score=694.55 Aligned_cols=409 Identities=24% Similarity=0.341 Sum_probs=370.4
Q ss_pred CceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 22 ~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
.+||||+|+. ++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|+.+|.++|+++++.|++++++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la 80 (513)
T cd07128 2 QSYVAGQWHAGTGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLY 80 (513)
T ss_pred ceeECCEEEcCCCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999986 46789999999999999999876 7999999999998 7999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcC--------ccccCCCCC-ceeEEEEec-cceEEEEcCCCchHH
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG--------SVIPSERPN-HMMLETWNP-LGVVGVITAFNFPCA 169 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~Gvv~~i~p~n~P~~ 169 (441)
++ +.|+|||+.+++.|+..+++.++|++...+...+ +..+...+. ...+..++| +|||++|+|||||+.
T Consensus 81 ~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~ 159 (513)
T cd07128 81 AL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVW 159 (513)
T ss_pred HH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHH
Confidence 96 9999999999999999999999999988776542 222211112 134567899 599999999999999
Q ss_pred hHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcC-CCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChH
Q 013505 170 VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTK 247 (441)
Q Consensus 170 ~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~ag-lP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (441)
..++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+| +.++++.| +.+++|+||||++
T Consensus 160 ~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l----~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 160 GMLEKFAPALLAGVPVIVKPATATAYLTEAV----VKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred HHHHHHHHHHHcCCEEEEECCCCCCHHHHHH----HHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 9999999999999999999999999999875 66788999 99999999998 44444432 5789999999999
Q ss_pred HHHHHHHHh--hccCCceeecCCCCCeEEEeCCCC-----HHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHH
Q 013505 248 VGLMVQQTV--HQRFGKCLLELSGNNAIIIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320 (441)
Q Consensus 248 ~g~~i~~~a--~~~~~~~~lelgG~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l 320 (441)
+|+.|++.+ +++++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l 312 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEAL 312 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHH
Confidence 999999985 478999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc-------CCCCceEeeEEE-EcCC--CC
Q 013505 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-------ESEGNFVQPTIV-EISP--TA 390 (441)
Q Consensus 321 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptvl-~~~~--~~ 390 (441)
+++++++++|+|+++++++||++++.++++++++|++|+++ +++++||... ...|+|++|||+ ++++ +|
T Consensus 313 ~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 313 KARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 99999999999999999999999999999999999999988 9999999752 135899999999 6776 48
Q ss_pred CccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 391 DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 391 ~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++++||+||||++|++|+|++|+|+++|+++|||++||||+|.+++++++
T Consensus 392 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~ 441 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELV 441 (513)
T ss_pred hHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988764
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-87 Score=691.43 Aligned_cols=416 Identities=25% Similarity=0.440 Sum_probs=388.3
Q ss_pred CCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHh
Q 013505 18 PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALRE 93 (441)
Q Consensus 18 ~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 93 (441)
....++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 96 (494)
T PRK09847 17 AIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEA 96 (494)
T ss_pred ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHH
Confidence 34456899999975 567899999999999999999999999999999999997 59999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHH
Q 013505 94 KLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (441)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 172 (441)
++++|++++++|+|||+.++. .|+..+++.+++++...+...+...+.. .+...+..++|+|||++|+|||||+...+
T Consensus 97 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (494)
T PRK09847 97 HAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTC 175 (494)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHHHH
Confidence 999999999999999999875 5999999999999998887766544432 33455788999999999999999999999
Q ss_pred HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHH
Q 013505 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (441)
Q Consensus 173 ~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (441)
+++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+++| +.+.+..|+.||+++.|+||||+.+|+.
T Consensus 176 ~~~~~ALaaGN~VvlKps~~~p~~~~~l----~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~ 251 (494)
T PRK09847 176 WKLGPALAAGNSVILKPSEKSPLSAIRL----AGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQ 251 (494)
T ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHH----HHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999875 5678899999999999999 7888999999999999999999999999
Q ss_pred HHHHhh-ccCCceeecCCCCCeEEEeCCC-CHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhcc
Q 013505 252 VQQTVH-QRFGKCLLELSGNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (441)
Q Consensus 252 i~~~a~-~~~~~~~lelgG~~~~iV~~da-dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 329 (441)
|.+.++ ++++|+++|+|||||+||++|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++.+++
T Consensus 252 v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 331 (494)
T PRK09847 252 LLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQP 331 (494)
T ss_pred HHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 999988 5889999999999999999997 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeC
Q 013505 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (441)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~ 408 (441)
|+|.++++.+||++++.+++++.++|++|+++| ++++||... ..|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 332 g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~ 409 (494)
T PRK09847 332 GHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFT 409 (494)
T ss_pred CCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecC
Confidence 999999999999999999999999999999999 999998763 35789999999 799999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 409 ~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|||+++|+++|||+++|||+|.+++.+++
T Consensus 410 ~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~ 441 (494)
T PRK09847 410 SEEQALQLANDSQYGLGAAVWTRDLSRAHRMS 441 (494)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 99999999999999999999999999998874
|
|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-87 Score=688.68 Aligned_cols=408 Identities=25% Similarity=0.463 Sum_probs=381.7
Q ss_pred CCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 21 PGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 21 ~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
-++||||+|..++.+++++||+||+++++++.++.+|+++|+++|++|+ +.++..+|.++|++++++|++++++|++
T Consensus 4 ~~~~i~g~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~ 80 (472)
T TIGR03250 4 EALRIAGEKVSRDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISD 80 (472)
T ss_pred CCceECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4689999998777889999999999999999999999999999999875 5789999999999999999999999999
Q ss_pred HHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccC----CCCCceeEEEEecc-ceEEEEcCCCchHHhHHHHh
Q 013505 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS----ERPNHMMLETWNPL-GVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~i 175 (441)
++++|+|||..+++.|+..+++.+++++.......+...+. ...+...+..++|+ |||++|+|||||+...++++
T Consensus 81 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~ 160 (472)
T TIGR03250 81 LITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKI 160 (472)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHH
Confidence 99999999999999999999999999998877665543321 11233567889998 99999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|.++..+ .++|.++|+|+|++|+++| +.+.+..|++||+++.|+||||+.+|+.|++
T Consensus 161 ~~ALaaGN~VvlKps~~~p~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 161 APAIATNNRMVVKPSEKTPLSALYL----ADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHcCCEEEEECCCcchHHHHHH----HHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999875 6678889999999999998 6788999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 237 ~a~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 314 (472)
T TIGR03250 237 RAG--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMD 314 (472)
T ss_pred Hhc--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCC
Confidence 876 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
+++++||++++.+.+++++++++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|.+||
T Consensus 315 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ea 391 (472)
T TIGR03250 315 PSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDA 391 (472)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHH
Confidence 9999999999999999999999999999999999964 5899999999 89999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||++||||+|.++++++.
T Consensus 392 i~~aN~~~~gL~a~v~t~d~~~~~~~~ 418 (472)
T TIGR03250 392 IRISNSTAYGLSSGVCTNRLDYITRFI 418 (472)
T ss_pred HHHHhCCCccceEEEEcCCHHHHHHHH
Confidence 999999999999999999999998874
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-87 Score=689.64 Aligned_cols=413 Identities=30% Similarity=0.499 Sum_probs=385.5
Q ss_pred ceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 23 CFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 23 ~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
+||||+|+. ++.+++++||+||+++++++.++.+|++.++++|++|++. |+.+|..+|.++|+++++.|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 489999976 3568999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCcc-ccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 99 GRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSV-IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
++++++|+|||..++. .|+..+++.+++++...+.+.... .+.. .+...+..++|+|||++|+|||||+...+++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~ 159 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGS-GGGHVLVRREPVGVVAAIVPWNAPLFLAALKIA 159 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-CCceEEEEEEeccEEEEEcCCchHHHHHHHHHH
Confidence 9999999999998775 499999999999998877654322 2211 234567889999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
+||++||+||+|||+.+|+++..+ .++|.++|+|+|++|+++|+.+.+..|+.|++++.|.||||+.+|+.|++.+
T Consensus 160 ~ALaaGN~VvlKps~~~p~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~ 235 (471)
T cd07139 160 PALAAGCTVVLKPSPETPLDAYLL----AEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVC 235 (471)
T ss_pred HHHhcCCEEEEECCCcCCHHHHHH----HHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999864 6778999999999999999778899999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
+++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 236 ~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 315 (471)
T cd07139 236 GERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPA 315 (471)
T ss_pred HhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
+++||++++.+.+++.+++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++||
T Consensus 316 ~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 395 (471)
T cd07139 316 TQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDA 395 (471)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHH
Confidence 9999999999999999999999999999999997643 35899999999 89999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||+++|||+|.+++++|.
T Consensus 396 i~~~n~~~~gL~a~i~s~d~~~~~~~~ 422 (471)
T cd07139 396 VRIANDSDYGLSGSVWTADVERGLAVA 422 (471)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 999999999999999999999998874
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-87 Score=707.75 Aligned_cols=410 Identities=23% Similarity=0.335 Sum_probs=373.3
Q ss_pred CceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 22 ~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
.+||||+|.. .+.+++++||+||+++++++.++ +|+++|+++|++| |+.|+++|..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela 80 (663)
T TIGR02278 2 QSYLSGEWRTGQGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALY 80 (663)
T ss_pred ceeECCEEEcCCCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999986 45789999999999999999999 5999999999996 9999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhc--------CccccCCCCC-ceeEEEEecc-ceEEEEcCCCchHH
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN--------GSVIPSERPN-HMMLETWNPL-GVVGVITAFNFPCA 169 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-Gvv~~i~p~n~P~~ 169 (441)
+ +++|+|||+.+++.|+..+++.+++++...+... ++..+...++ ...+..++|+ |||++|+|||||+.
T Consensus 81 ~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~ 159 (663)
T TIGR02278 81 A-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVW 159 (663)
T ss_pred H-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHH
Confidence 9 5999999999999999999999999998877632 3333322122 2457889998 99999999999999
Q ss_pred hHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcC-CCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHH
Q 013505 170 VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKV 248 (441)
Q Consensus 170 ~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~ag-lP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~ 248 (441)
..++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+|+ .+..+..+++++.|+||||+++
T Consensus 160 ~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l----~~~~~~aG~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS~~~ 233 (663)
T TIGR02278 160 GLLEKFAPAFLAGVPTLAKPATPTAYVAEAL----VRTMVESGLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGSAAT 233 (663)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECCHHH
Confidence 9999999999999999999999999999875 66788899 999999999984 1233333477899999999999
Q ss_pred HHHHHHHh--hccCCceeecCCCCCeEEEeCCCC-----HHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHH
Q 013505 249 GLMVQQTV--HQRFGKCLLELSGNNAIIIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321 (441)
Q Consensus 249 g~~i~~~a--~~~~~~~~lelgG~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~ 321 (441)
|+.|++.+ +++++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 234 G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~ 313 (663)
T TIGR02278 234 ADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQ 313 (663)
T ss_pred HHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHH
Confidence 99999874 478999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCC-Ccccccccc
Q 013505 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTA-DIVKEELFA 399 (441)
Q Consensus 322 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~-~i~~eE~fg 399 (441)
++++++++|+|+++++++||++++.++++++++|++|+++|+++++||... .+|+|++|||+ +++++| ++++||+||
T Consensus 314 ~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~FG 392 (663)
T TIGR02278 314 ARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAFG 392 (663)
T ss_pred HHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhccccC
Confidence 999999999999999999999999999999999999999999999999753 35899999999 788876 799999999
Q ss_pred ceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 400 PVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 400 Pv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||++|++|+|.+|||+++|+++|||++||||+|.+.++++.
T Consensus 393 PVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~ 433 (663)
T TIGR02278 393 PVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFI 433 (663)
T ss_pred CeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999998764
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-86 Score=684.35 Aligned_cols=411 Identities=25% Similarity=0.446 Sum_probs=380.9
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
.+.++||+|+|+. ++..++++||+||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|+++++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 93 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKA 93 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 5567899999975 46789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcC--ccccC-----CCCCceeEEEEeccceEEEEcCCCchHH
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG--SVIPS-----ERPNHMMLETWNPLGVVGVITAFNFPCA 169 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~P~Gvv~~i~p~n~P~~ 169 (441)
+|++++++|+|||..++..|+..+++.+++++....+..+ ..+.. ...+...+.+++|+|||++|+|||||+.
T Consensus 94 el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 173 (496)
T PLN00412 94 PIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVN 173 (496)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHH
Confidence 9999999999999999999999999999999876655422 22211 1112345678999999999999999999
Q ss_pred hHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHH
Q 013505 170 VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKV 248 (441)
Q Consensus 170 ~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~ 248 (441)
..++++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+++| +.+.++.|..||+|+.|.|||| .+
T Consensus 174 ~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l----~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~ 248 (496)
T PLN00412 174 LAVSKIAPALIAGNAVVLKPPTQGAVAALHM----VHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DT 248 (496)
T ss_pred HHHHHHHHHHHcCCEEEEECCccCcHHHHHH----HHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HH
Confidence 9999999999999999999999999998875 5667889999999999998 6788999999999999999999 99
Q ss_pred HHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhc
Q 013505 249 GLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVK 328 (441)
Q Consensus 249 g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 328 (441)
|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 249 g~~v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 326 (496)
T PLN00412 249 GIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLT 326 (496)
T ss_pred HHHHHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCc
Confidence 999999875 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 329 IGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 329 ~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+|+|.+ ++++||+++..+++++.++|++|+.+|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|
T Consensus 327 ~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 402 (496)
T PLN00412 327 VGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI 402 (496)
T ss_pred cCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEe
Confidence 999987 789999999999999999999999999999998753 6899999999 89999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|||+++|+++|||++||||+|.+++++|+
T Consensus 403 ~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~ 435 (496)
T PLN00412 403 NSVEEGIHHCNASNFGLQGCVFTRDINKAILIS 435 (496)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 999999999999999999999999999999875
|
|
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-86 Score=682.10 Aligned_cols=399 Identities=32% Similarity=0.543 Sum_probs=375.9
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (441)
++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcC---ccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCCh
Q 013505 118 QEVIDMCDFAVGLSRQLNG---SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194 (441)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p 194 (441)
..+++.+++++...+.+.+ ...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999999988876632 2222222344567889999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeE
Q 013505 195 LITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273 (441)
Q Consensus 195 ~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~ 273 (441)
+++..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+|+.|++.++++++|+++|+|||||+
T Consensus 161 ~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~ 236 (456)
T cd07110 161 LTELEL----AEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPI 236 (456)
T ss_pred HHHHHH----HHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCee
Confidence 999875 5667899999999999999 67789999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHH
Q 013505 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK 353 (441)
Q Consensus 274 iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 353 (441)
||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++
T Consensus 237 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 316 (456)
T cd07110 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLS 316 (456)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013505 354 GIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (441)
Q Consensus 354 ~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t 430 (441)
++++++.+|+++++||...+ ..|+|++|||+ +++++|+++++|+||||++|++|+|.+|||+++|+++|||+++|||
T Consensus 317 ~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t 396 (456)
T cd07110 317 FIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVIS 396 (456)
T ss_pred HHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999997643 46899999999 7999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhh
Q 013505 431 RSPENIFKWL 440 (441)
Q Consensus 431 ~d~~~~~~~~ 440 (441)
+|.++++++.
T Consensus 397 ~d~~~~~~~~ 406 (456)
T cd07110 397 RDAERCDRVA 406 (456)
T ss_pred CCHHHHHHHH
Confidence 9999998874
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-86 Score=678.73 Aligned_cols=397 Identities=30% Similarity=0.481 Sum_probs=374.3
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (441)
++||+||+++++++.++.+|+++|++.|++||+. |+. ++.+|.++|+++++.|++|+++|++++++|+|||+.+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChh
Q 013505 116 EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195 (441)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~ 195 (441)
|+..+++.+++++...+...+...+. .++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 99999999999998888766554332 23455678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHh-cCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeE
Q 013505 196 ITIAITKLVSEVFER-NKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273 (441)
Q Consensus 196 ~~~~l~~li~~~l~~-aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~ 273 (441)
++..+ .++|.+ +|+|+|++|+|+| +.++++.|++||+++.|.||||+.+|+.|++.++++++++++|+|||||+
T Consensus 159 ~~~~l----~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~ 234 (455)
T cd07120 159 INAAI----IRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPC 234 (455)
T ss_pred HHHHH----HHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCee
Confidence 99875 566777 7999999999998 77889999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHH
Q 013505 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK 353 (441)
Q Consensus 274 iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 353 (441)
||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++
T Consensus 235 IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~ 314 (455)
T cd07120 235 IVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDR 314 (455)
T ss_pred EECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEecCcccCC---CCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEe
Q 013505 354 GIENIKSQGGKILTGGSVIES---EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (441)
Q Consensus 354 ~v~~a~~~Ga~v~~gg~~~~~---~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~ 429 (441)
+|++++++|+++++||...+. .|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 315 ~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~if 394 (455)
T cd07120 315 MVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVW 394 (455)
T ss_pred HHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEE
Confidence 999999999999998865332 6899999999 799999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHhhh
Q 013505 430 TRSPENIFKWL 440 (441)
Q Consensus 430 t~d~~~~~~~~ 440 (441)
|+|.+++++++
T Consensus 395 t~d~~~a~~~~ 405 (455)
T cd07120 395 TRDLARAMRVA 405 (455)
T ss_pred cCCHHHHHHHH
Confidence 99999998874
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-86 Score=681.36 Aligned_cols=399 Identities=35% Similarity=0.603 Sum_probs=376.1
Q ss_pred EeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH
Q 013505 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (441)
Q Consensus 36 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (441)
++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccccCCC----CCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCC
Q 013505 116 EVQEVIDMCDFAVGLSRQLNGSVIPSER----PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (441)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~ 191 (441)
|+..+++.++++++..+.+.+...+... .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999877766554433211 133466789999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCC
Q 013505 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (441)
Q Consensus 192 ~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 270 (441)
.+|.++..+ .+++.++|+|+|++|+++| +.+.++.|++||+++.|.||||+.+|+.|++.++++++|+++|+|||
T Consensus 161 ~~p~~~~~l----~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~ 236 (456)
T cd07145 161 NTPLTAIEL----AKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGS 236 (456)
T ss_pred cchHHHHHH----HHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCC
Confidence 999999875 6678889999999999999 78889999999999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHH
Q 013505 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (441)
Q Consensus 271 ~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (441)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++
T Consensus 237 n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (456)
T cd07145 237 DPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVER 316 (456)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEe
Q 013505 351 FEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (441)
Q Consensus 351 ~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~ 429 (441)
+++++++++++|+++++||... .|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++|||
T Consensus 317 ~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 394 (456)
T cd07145 317 MENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVF 394 (456)
T ss_pred HHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999999753 3899999999 789999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHhhh
Q 013505 430 TRSPENIFKWL 440 (441)
Q Consensus 430 t~d~~~~~~~~ 440 (441)
|+|.++++++.
T Consensus 395 t~d~~~~~~~~ 405 (456)
T cd07145 395 TNDINRALKVA 405 (456)
T ss_pred CCCHHHHHHHH
Confidence 99999998874
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-86 Score=685.17 Aligned_cols=413 Identities=22% Similarity=0.339 Sum_probs=370.9
Q ss_pred CCCCceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHh-HHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS-KIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
+.+++||+|+|+. ++.+++++||+||+++++++. +.+|+++|+++|++|+ +.|+++|+.+|.++|+++++.|+++++
T Consensus 3 ~~~~~~i~G~~~~~~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (521)
T PRK11903 3 ELLANYVAGRWQAGSGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRD 81 (521)
T ss_pred chhhhhCCCEEEcCCCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3446899999986 457799999999999999997 8899999999999995 999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCC--------CCceeEEEEec-cceEEEEcCCCch
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER--------PNHMMLETWNP-LGVVGVITAFNFP 167 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~Gvv~~i~p~n~P 167 (441)
+|++++++|+|||+.+++.|+.++++.++|++...+.+.+....... +....+..++| +|||++|+|||||
T Consensus 82 ela~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P 161 (521)
T PRK11903 82 AYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFP 161 (521)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchH
Confidence 99999999999999999999999999999999887766432211110 12234567889 6999999999999
Q ss_pred HHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcC-CCCceEEEecC-CHHHHHHHHcCCCccEEEeeCC
Q 013505 168 CAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245 (441)
Q Consensus 168 ~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~ag-lP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs 245 (441)
+...++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+| +.++++.| ++++.|+||||
T Consensus 162 ~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l----~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS 234 (521)
T PRK11903 162 AWGLWEKAAPALLAGVPVIVKPATATAWLTQRM----VKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGS 234 (521)
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHH----HHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECC
Confidence 999999999999999999999999999999875 56678899 99999999998 55555444 78999999999
Q ss_pred hHHHHHHHHHh--hccCCceeecCCCCCeEEEeCCCC-----HHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHH
Q 013505 246 TKVGLMVQQTV--HQRFGKCLLELSGNNAIIIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (441)
Q Consensus 246 ~~~g~~i~~~a--~~~~~~~~lelgG~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (441)
+.+|+.|++.+ +.+++|+++|||||||+||++||| ++.+++.+++|+|.|+||.|++++|||||+++||+|++
T Consensus 235 ~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~ 314 (521)
T PRK11903 235 AETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAE 314 (521)
T ss_pred HHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHH
Confidence 99999999964 478999999999999999999999 59999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc------CCCCceEeeEEE-EcCC--C
Q 013505 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI------ESEGNFVQPTIV-EISP--T 389 (441)
Q Consensus 319 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~------~~~g~~~~Ptvl-~~~~--~ 389 (441)
+|+++++++++|+|+++++++|||+++.+.+++.++|+.+ .+|+++++||... +.+|+|++|||+ ++++ +
T Consensus 315 ~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~ 393 (521)
T PRK11903 315 ALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAA 393 (521)
T ss_pred HHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCcc
Confidence 9999999999999999999999999999999999999964 5799999999752 135899999999 5543 4
Q ss_pred CCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 390 ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 390 ~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 394 ~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~ 444 (521)
T PRK11903 394 TAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAA 444 (521)
T ss_pred chHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHH
Confidence 688999999999999999999999999999999999999999999988864
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-86 Score=680.15 Aligned_cols=397 Identities=29% Similarity=0.511 Sum_probs=373.4
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (441)
++||.||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhH
Q 013505 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (441)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~ 197 (441)
..+++.+++++...+.+.+...+.. ++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 9999999999988777766554433 344567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEe
Q 013505 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276 (441)
Q Consensus 198 ~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~ 276 (441)
..+++ ++.+ ++|+|++|+++| +.+.++.|++||++++|.||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus 160 ~~l~~----~~~~-~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~ 234 (456)
T cd07107 160 LRLAE----LARE-VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVF 234 (456)
T ss_pred HHHHH----HHHH-hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEEC
Confidence 88654 4555 499999999998 66789999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH-HhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 277 DDADIKLAVRSVLFAA-VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 277 ~dadl~~aa~~i~~~~-~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
+|||++.|++.+++++ |.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.++++++++|
T Consensus 235 ~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i 314 (456)
T cd07107 235 PDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYI 314 (456)
T ss_pred CCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHH
Confidence 9999999999999995 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013505 356 ENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t 430 (441)
++|.++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft 394 (456)
T cd07107 315 DSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWT 394 (456)
T ss_pred HHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEEC
Confidence 999999999999997532 35899999999 8999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhh
Q 013505 431 RSPENIFKWL 440 (441)
Q Consensus 431 ~d~~~~~~~~ 440 (441)
+|.+++++++
T Consensus 395 ~d~~~~~~~~ 404 (456)
T cd07107 395 NDISQAHRTA 404 (456)
T ss_pred CCHHHHHHHH
Confidence 9999998874
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-86 Score=684.16 Aligned_cols=425 Identities=28% Similarity=0.442 Sum_probs=390.5
Q ss_pred HHHHHhccCCCCCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHH
Q 013505 8 YEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (441)
Q Consensus 8 ~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 86 (441)
..+++.+.......-.||+|+|..++.+++++||+| |+++++++.++.+|+++++++|++|++.|+.++..+|.++|++
T Consensus 20 ~~~~~~~~~~~~~~~p~i~g~~~~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 99 (518)
T cd07125 20 ADALKAFDEKEWEAIPIINGEETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEK 99 (518)
T ss_pred HHHHHHhhhcCcccCceECCEEeeCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 356666655544555689999987788999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCcc-ccCCCCCceeEEEEeccceEEEEcCCC
Q 013505 87 IGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSV-IPSERPNHMMLETWNPLGVVGVITAFN 165 (441)
Q Consensus 87 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n 165 (441)
+++.|++++++|+++++.|+|||+.+++.|+..+++.+++++...++..+.. .+. ..+...+.+++|+|||++|+|||
T Consensus 100 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~P~GVV~~I~p~N 178 (518)
T cd07125 100 AADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPG-PTGELNGLELHGRGVFVCISPWN 178 (518)
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCceeEEEEecccEEEEECCcc
Confidence 9999999999999999999999999999999999999999998877654332 221 12345678899999999999999
Q ss_pred chHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeC
Q 013505 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (441)
Q Consensus 166 ~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (441)
||+...++++++||++||+||+|||+.+|+++..+ .++|.++|+|+|++|+++| +.+.+..|+.|++|+.|+|||
T Consensus 179 ~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l----~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftG 254 (518)
T cd07125 179 FPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARA----VELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTG 254 (518)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHH----HHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEEC
Confidence 99999999999999999999999999999999875 5678899999999999999 556899999999999999999
Q ss_pred ChHHHHHHHHHhhcc---CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHH
Q 013505 245 STKVGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321 (441)
Q Consensus 245 s~~~g~~i~~~a~~~---~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~ 321 (441)
|+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 255 s~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~ 334 (518)
T cd07125 255 STETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLK 334 (518)
T ss_pred CHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHH
Confidence 999999999998855 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccc
Q 013505 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAP 400 (441)
Q Consensus 322 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgP 400 (441)
++++++++|+|+++++++||++++.+++++++++++++. ++++++||......|+|++|||+ ++ +|++++||+|||
T Consensus 335 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgP 411 (518)
T cd07125 335 GAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGP 411 (518)
T ss_pred HHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCC
Confidence 999999999999999999999999999999999999987 57899998753336999999999 66 899999999999
Q ss_pred eEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 401 VLYVMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 401 v~~v~~~~--~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|++|+ |++|||+++|+++|||++||||+|.+++++|+
T Consensus 412 Vl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~ 453 (518)
T cd07125 412 ILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWR 453 (518)
T ss_pred eEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHH
Confidence 99999999 99999999999999999999999999998874
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-86 Score=679.06 Aligned_cols=398 Identities=30% Similarity=0.543 Sum_probs=375.5
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH--hhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHH
Q 013505 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKI--WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE 116 (441)
Q Consensus 39 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 116 (441)
.||+||+++++++.++.+|++++++.|++||+. |+++|.++|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 589999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhh
Q 013505 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (441)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~ 196 (441)
+..+++.+++++...+.+.+...+...++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999987776655443322234456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEE
Q 013505 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (441)
Q Consensus 197 ~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV 275 (441)
+..+ .+++.++|+|+|++|+++| +.++++.|++|++++.|.||||+.+|+.|.+.++++++++++|+|||||+||
T Consensus 162 ~~~l----~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV 237 (454)
T cd07118 162 TLML----AELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIV 237 (454)
T ss_pred HHHH----HHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEE
Confidence 9875 5678899999999999998 6678999999999999999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 276 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++.+++||++++.+.+++.++|
T Consensus 238 ~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i 317 (454)
T cd07118 238 FADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYV 317 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEecCcccC-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013505 356 ENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~ 433 (441)
++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 318 ~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~ 397 (454)
T cd07118 318 DAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDI 397 (454)
T ss_pred HHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCH
Confidence 999999999999998654 46899999999 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh
Q 013505 434 ENIFKWL 440 (441)
Q Consensus 434 ~~~~~~~ 440 (441)
++++++.
T Consensus 398 ~~~~~~~ 404 (454)
T cd07118 398 DTALTVA 404 (454)
T ss_pred HHHHHHH
Confidence 9998874
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-86 Score=679.77 Aligned_cols=398 Identities=32% Similarity=0.575 Sum_probs=377.9
Q ss_pred EeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH
Q 013505 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (441)
Q Consensus 36 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (441)
++++||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChh
Q 013505 116 EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195 (441)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~ 195 (441)
|+..+++.+++++...+...+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999998887766654443324455678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEE
Q 013505 196 ITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274 (441)
Q Consensus 196 ~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~i 274 (441)
++..+ .+++.++|+|+|++|+++| +.+.++.|+.|++|++|.||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 t~~~l----~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~i 236 (451)
T cd07150 161 IGLKI----AEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLI 236 (451)
T ss_pred HHHHH----HHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeE
Confidence 99875 5678899999999999998 778999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHH
Q 013505 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354 (441)
Q Consensus 275 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 354 (441)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 237 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 316 (451)
T cd07150 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQ 316 (451)
T ss_pred ECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013505 355 IENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433 (441)
Q Consensus 355 v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~ 433 (441)
+++++.+|+++++||.. +|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 317 i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 317 VEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 99999999999999864 5899999999 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh
Q 013505 434 ENIFKWL 440 (441)
Q Consensus 434 ~~~~~~~ 440 (441)
++++++.
T Consensus 394 ~~~~~~~ 400 (451)
T cd07150 394 QRAFKLA 400 (451)
T ss_pred HHHHHHH
Confidence 9998874
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-86 Score=678.42 Aligned_cols=397 Identities=25% Similarity=0.434 Sum_probs=372.3
Q ss_pred eeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHH-hhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH
Q 013505 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKI-WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (441)
Q Consensus 37 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (441)
+++||+||+++++++.++.+|+++++++|++||+. |+.+|.++|.++|+++++.|++++++|++++++|+|||..++..
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 57899999999999999999999999999999998 56799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccccCC----CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCC
Q 013505 116 EVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (441)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~ 191 (441)
|+.+.++.+++++...+.+.+...+.. .++...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 161 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence 999999999999988877655433321 1234567889999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCC
Q 013505 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (441)
Q Consensus 192 ~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~ 271 (441)
.+|+++..+ .+++.++|+|+|++|+++|+.+.++.|+.||+|+.|.||||+++|+.|++.++. .+|+++|+||||
T Consensus 162 ~~p~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~ 236 (455)
T cd07148 162 ATPLSCLAF----VDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAA 236 (455)
T ss_pred cccHHHHHH----HHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCC
Confidence 999999875 566788999999999999966789999999999999999999999999998876 489999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHH
Q 013505 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (441)
Q Consensus 272 ~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (441)
|+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.+++++
T Consensus 237 p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 316 (455)
T cd07148 237 PVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRV 316 (455)
T ss_pred ceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013505 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (441)
Q Consensus 352 ~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t 430 (441)
+++|++++++|+++++||... .|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 317 ~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t 394 (455)
T cd07148 317 EEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFT 394 (455)
T ss_pred HHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEc
Confidence 999999999999999999763 4789999999 7899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhh
Q 013505 431 RSPENIFKWL 440 (441)
Q Consensus 431 ~d~~~~~~~~ 440 (441)
+|.+++++|+
T Consensus 395 ~d~~~~~~~~ 404 (455)
T cd07148 395 KDLDVALKAV 404 (455)
T ss_pred CCHHHHHHHH
Confidence 9999999874
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-87 Score=685.42 Aligned_cols=407 Identities=34% Similarity=0.618 Sum_probs=383.4
Q ss_pred ecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhC
Q 013505 29 WKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMG 107 (441)
Q Consensus 29 ~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G 107 (441)
|+. .+++++++||.||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|+++.++|++++++|+|
T Consensus 1 w~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~G 80 (462)
T PF00171_consen 1 WVSSESETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETG 80 (462)
T ss_dssp EEE-TSSEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred CcCCCCCEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccc
Confidence 555 4578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEE
Q 013505 108 KILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVW 187 (441)
Q Consensus 108 k~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVl 187 (441)
||+.+++.|+..+++.+++++...+.+.+..++. ..+...++.++|+|||++|+|||||+...++++++||++||+||+
T Consensus 81 k~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVl 159 (462)
T PF00171_consen 81 KPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVL 159 (462)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEE
T ss_pred cccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhccccccee
Confidence 9999999999999999999999998877766555 366778899999999999999999999999999999999999999
Q ss_pred ecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeec
Q 013505 188 KGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLE 266 (441)
Q Consensus 188 kps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~le 266 (441)
|||+.+|.++..+ .+++.++|+|+|++|+++| +.+++..|+.||+++.|.||||+++|+.|.+.++++++|+++|
T Consensus 160 kps~~~~~~~~~l----~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~le 235 (462)
T PF00171_consen 160 KPSEQAPLTALLL----AELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLE 235 (462)
T ss_dssp EEBTTSHHHHHHH----HHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEE
T ss_pred eeccccccccccc----hhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhccccccccccc
Confidence 9999999999875 6667788999999999999 8999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChh
Q 013505 267 LSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPE 346 (441)
Q Consensus 267 lgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~ 346 (441)
+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..
T Consensus 236 lgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~ 315 (462)
T PF00171_consen 236 LGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKA 315 (462)
T ss_dssp ECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHH
T ss_pred ccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCEEEecC---cccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCC
Q 013505 347 SRKNFEKGIENIKSQGGKILTGG---SVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422 (441)
Q Consensus 347 ~~~~~~~~v~~a~~~Ga~v~~gg---~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~ 422 (441)
+.+++.+++++++.+|+++++|| ......|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|
T Consensus 316 ~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 395 (462)
T PF00171_consen 316 QRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEY 395 (462)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSE
T ss_pred hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCC
Confidence 99999999999999999999999 233467999999999 79999999999999999999999999999999999999
Q ss_pred CcEEEEecCCHHHHHhhh
Q 013505 423 GLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 423 gl~asv~t~d~~~~~~~~ 440 (441)
||+++|||+|.+++++++
T Consensus 396 gl~a~v~s~d~~~~~~~~ 413 (462)
T PF00171_consen 396 GLTASVFSRDESRAERLA 413 (462)
T ss_dssp ESEEEEECSBHHHHHHHH
T ss_pred CceeEEeccccccccccc
Confidence 999999999999998875
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-86 Score=678.19 Aligned_cols=405 Identities=29% Similarity=0.440 Sum_probs=377.5
Q ss_pred CCCCceecCeeccCCCeEeeecCCCC-ceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 19 ETPGCFVNGKWKAHGPTVSSINPVNN-QKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 19 ~~~~~~I~g~~~~~~~~~~~~~P~tg-~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
-.+++||||+|+.++.+++++||.|+ +++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++++++
T Consensus 36 ~~~~~~i~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 115 (500)
T TIGR01238 36 WQAAPIIGHSYKADGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPE 115 (500)
T ss_pred eecCceECCEEecCCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHH
Confidence 34689999999877788999999996 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
|++++++|+|||+.++..|+..+++.+++++...+...+. ..++|+|||++|+|||||+...++++++
T Consensus 116 la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~------------~~~~P~GVV~~I~pwN~P~~~~~~~i~~ 183 (500)
T TIGR01238 116 LMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------------FSVESRGVFVCISPWNFPLAIFTGQISA 183 (500)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc------------eeccCcceEEEECCCchHHHHHHHHHHH
Confidence 9999999999999999999999999999999876543211 2588999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+++| +.+.++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 184 ALaaGN~VVlKps~~tp~~~~~l----~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~a 259 (500)
T TIGR01238 184 ALAAGNTVIAKPAEQTSLIAYRA----VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTL 259 (500)
T ss_pred HHHcCCEEEEeCCCCccHHHHHH----HHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 99999999999999999998875 6778889999999999998 668999999999999999999999999999999
Q ss_pred hccC---CceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 257 HQRF---GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 257 ~~~~---~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
+++. +|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 260 a~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~ 339 (500)
T TIGR01238 260 AQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH 339 (500)
T ss_pred hhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCC
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCc---ccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeC--
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS---VIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQ-- 408 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~---~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~-- 408 (441)
+++++|||++++.+.++++++|+++++.|++++.++. ....+|+|++|||+.. ++|.+++||+||||++|++|+
T Consensus 340 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~-~~~~~~~eE~FgPvl~v~~~~~~ 418 (500)
T TIGR01238 340 LLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL-DDIAELSEEVFGPVLHVVRYKAR 418 (500)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc-CCchHhhCCCcCCEEEEEEeCCC
Confidence 9999999999999999999999999999999875432 1223699999999963 688899999999999999998
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 409 ~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|||+++|+++|||+++|||+|.+.+++|.
T Consensus 419 ~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~ 450 (500)
T TIGR01238 419 ELDQIVDQINQTGYGLTMGVHSRIETTYRWIE 450 (500)
T ss_pred CHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHH
Confidence 79999999999999999999999999998874
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-86 Score=684.34 Aligned_cols=414 Identities=27% Similarity=0.431 Sum_probs=385.2
Q ss_pred CCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 21 PGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 21 ~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
+.++|.|.|..++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++
T Consensus 19 ~~~~~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~ 98 (524)
T PRK09407 19 LRRLTARVDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLD 98 (524)
T ss_pred HHHHHhhcCCCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34578888877889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccc-cCCCC-CceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI-PSERP-NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
++++|+|||..++..|+...++.+++++...+...+... ....+ ....+..++|+|||++|+|||||+...++++++|
T Consensus 99 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~A 178 (524)
T PRK09407 99 LVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPA 178 (524)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHH
Confidence 999999999999999999999999999988776544321 11111 2356778999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhh
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (441)
|++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.++.|++| ++.|+||||+++|+.|++.++
T Consensus 179 LaaGN~VIlKPs~~tp~~~~~l----~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa 252 (524)
T PRK09407 179 LLAGNAVVLKPDSQTPLTALAA----VELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG 252 (524)
T ss_pred HHcCCEEEEECCCCCHHHHHHH----HHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHH
Confidence 9999999999999999999875 5667899999999999999 77889999986 789999999999999999999
Q ss_pred ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCC
Q 013505 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (441)
Q Consensus 258 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 337 (441)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++.+
T Consensus 253 ~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~ 332 (524)
T PRK09407 253 RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSA 332 (524)
T ss_pred hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHH
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~ 415 (441)
++||++++.+++++++++++++++|+++++||.... .+|+|++|||+ +++++|++++||+||||++|++|+|++|||+
T Consensus 333 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~ 412 (524)
T PRK09407 333 DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVE 412 (524)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHH
Confidence 999999999999999999999999999999997532 35899999999 7999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 416 INNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 416 ~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|+++|||++||||+|.++++++.
T Consensus 413 ~~N~~~~gLsa~V~t~d~~~a~~~~ 437 (524)
T PRK09407 413 RANDTPYGLNASVWTGDTARGRAIA 437 (524)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999998875
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-86 Score=672.83 Aligned_cols=404 Identities=22% Similarity=0.328 Sum_probs=367.6
Q ss_pred ceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHh--hCCCHHHH----HHHHHHHHHHHHhh--
Q 013505 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIW--MELPAPKR----GEVVRQIGDALREK-- 94 (441)
Q Consensus 23 ~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~-- 94 (441)
+||+|+|+.++++++++||+||+++++++.++.+|+++|+++|++||+.| +.++..+| .++|+++++.|+++
T Consensus 1 ~~i~g~~~~~~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~ 80 (489)
T cd07126 1 NLVAGKWKGASNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEV 80 (489)
T ss_pred CcCCCEEecCCCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCC
Confidence 47999998877889999999999999999999999999999999999988 56779999 89999999999998
Q ss_pred HHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccc--cCCCCCceeEEEEeccceEEEEcCCCchHHhHH
Q 013505 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI--PSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (441)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 172 (441)
.++|++++++|+|||+.+++.|+..+++.++++++..+...+... +...++...+++++|+|||++|+|||||+.+.+
T Consensus 81 ~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~ 160 (489)
T cd07126 81 EDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPA 160 (489)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHH
Confidence 599999999999999999999999999999999988776554432 222234456889999999999999999999999
Q ss_pred HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHH
Q 013505 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (441)
Q Consensus 173 ~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (441)
+++++||++||+||+|||+.+|+++.++ .+++.++|+|+|++|+|+| +.+ +..++.|+++++|+||||+++|+.
T Consensus 161 ~~ia~ALaaGN~VVlKPSe~tp~~~~~l----~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr~ 235 (489)
T cd07126 161 LQLMGALFMGNKPLLKVDSKVSVVMEQF----LRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAER 235 (489)
T ss_pred HHHHHHHHcCCEEEEECCCCCCHHHHHH----HHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999875 6678899999999999999 544 566889999999999999999999
Q ss_pred HHHHhhccCCceeecCCCCCeEEEeCCC-CHHHHHHHHHHHHHhcCCCCccCcceEEEeccc-HHHHHHHHHHHHHhhcc
Q 013505 252 VQQTVHQRFGKCLLELSGNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI-YQTVLDQLVDVYKQVKI 329 (441)
Q Consensus 252 i~~~a~~~~~~~~lelgG~~~~iV~~da-dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~ 329 (441)
|...++ +++++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++++
T Consensus 236 i~~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~ 312 (489)
T cd07126 236 LALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKL 312 (489)
T ss_pred HHHHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhccc
Confidence 998876 6799999999999999999 999999999999999999999999999999995 68999999999999998
Q ss_pred CCCCCCCCccCCCCChhHHHHHHHHHHHHHH-CCCEEEecCcccCC----CC-ceEeeEEEE-------cCCCCCccccc
Q 013505 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIES----EG-NFVQPTIVE-------ISPTADIVKEE 396 (441)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~-~Ga~v~~gg~~~~~----~g-~~~~Ptvl~-------~~~~~~i~~eE 396 (441)
|+ +++||+++.. .+++.++++++++ +|+++++||...+. +| .|++|||+. ++++|++++||
T Consensus 313 g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eE 386 (489)
T cd07126 313 ED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTE 386 (489)
T ss_pred CC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCC
Confidence 74 4889999998 9999999999997 99999999976432 23 389999984 46799999999
Q ss_pred cccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 397 LFAPVLYVMKFQT--FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 397 ~fgPv~~v~~~~~--~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||++|++|+| ++|||+++|+++|||++||||+|.+++++++
T Consensus 387 iFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~ 432 (489)
T cd07126 387 VFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVL 432 (489)
T ss_pred CcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHH
Confidence 9999999999999 9999999999999999999999999998874
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-86 Score=703.01 Aligned_cols=414 Identities=24% Similarity=0.348 Sum_probs=372.5
Q ss_pred CCCCCceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 18 PETPGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 18 ~~~~~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
|+..++||||+|+. ++.++.++||.||+++++++.++ +|+++|+++|++| ++.|+++|+.+|.++|+++++.|++++
T Consensus 2 ~~~~~~~i~G~~~~~~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~ 80 (675)
T PRK11563 2 MQKLQSYVAGRWQTGQGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERK 80 (675)
T ss_pred CccccceecCEEEcCCCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhH
Confidence 56667999999986 45679999999999999999987 6999999999998 799999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhc--------CccccCCCCC-ceeEEEEecc-ceEEEEcCCC
Q 013505 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN--------GSVIPSERPN-HMMLETWNPL-GVVGVITAFN 165 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-Gvv~~i~p~n 165 (441)
++|++ ++.|+|||+.+++.|+..+++.+++++...+... ++..+...++ ...+..++|+ |||++|+|||
T Consensus 81 ~ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwN 159 (675)
T PRK11563 81 EELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFN 159 (675)
T ss_pred HHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCc
Confidence 99998 5999999999999999999999999998776532 2222211112 1246778997 9999999999
Q ss_pred chHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcC-CCCceEEEecCCHHHHHHHHcCCCccEEEeeC
Q 013505 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTG 244 (441)
Q Consensus 166 ~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~ag-lP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftG 244 (441)
||+...++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+|+. ++.+..++++++|+|||
T Consensus 160 fP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l----~~~~~eaG~~P~gv~~vv~g~~--~~~~~~~~~i~~v~FTG 233 (675)
T PRK11563 160 FPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAV----VRLIVESGLLPEGALQLICGSA--GDLLDHLDGQDVVTFTG 233 (675)
T ss_pred hHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHH----HHHHHHcCCCCCCcEEEeeCCH--HHHhhcCCCCCEEEEEC
Confidence 99999999999999999999999999999998875 56678899 9999999999842 22333446899999999
Q ss_pred ChHHHHHHHHH--hhccCCceeecCCCCCeEEEeCCCC-----HHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHH
Q 013505 245 STKVGLMVQQT--VHQRFGKCLLELSGNNAIIIMDDAD-----IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317 (441)
Q Consensus 245 s~~~g~~i~~~--a~~~~~~~~lelgG~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~ 317 (441)
|+++|+.|++. ++++++|+++|||||||+||++||| ++.|++.+++|+|.|+||.|++++|||||+++||+|+
T Consensus 234 S~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~ 313 (675)
T PRK11563 234 SAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVI 313 (675)
T ss_pred cHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHH
Confidence 99999999985 4588999999999999999999995 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc-------CCCCceEeeEEE-EcCC-
Q 013505 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-------ESEGNFVQPTIV-EISP- 388 (441)
Q Consensus 318 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~-------~~~g~~~~Ptvl-~~~~- 388 (441)
++|+++++++++|+|+++++++||++++.+++++.++|++|+++ +++++||... ...|+|++|||+ ++++
T Consensus 314 ~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~ 392 (675)
T PRK11563 314 EALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPL 392 (675)
T ss_pred HHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCch
Confidence 99999999999999999999999999999999999999999998 9999999631 135999999999 7887
Q ss_pred -CCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 389 -TADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 389 -~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 393 ~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~ 445 (675)
T PRK11563 393 EAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELV 445 (675)
T ss_pred hhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999998864
|
|
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-86 Score=675.06 Aligned_cols=399 Identities=30% Similarity=0.505 Sum_probs=374.7
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhh-CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-H
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWM-ELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-G 115 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 115 (441)
++||+||+++++++.++.+|+++++++|++|++.|+ ++|..+|.++|+++++.|++++++|++++++|+|||+.++. .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 99999999999999999999999999999999999998775 5
Q ss_pred HHHHHHHHHHHHHHhhhhhcCcc-ccCC---CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCC
Q 013505 116 EVQEVIDMCDFAVGLSRQLNGSV-IPSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (441)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~ 191 (441)
|+..+++.++++++..+.+.+.. ++.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999998887765443 2221 1244567899999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCC
Q 013505 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (441)
Q Consensus 192 ~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 270 (441)
.+|.++..+ .++|.++|+|+|++|+++| +.+++..|+.||+++.|.||||+.+|+.|++.++++++|+++|+|||
T Consensus 161 ~~p~~~~~l----~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~ 236 (459)
T cd07089 161 DTPLSALLL----GEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGK 236 (459)
T ss_pred CChHHHHHH----HHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCC
Confidence 999999875 6678889999999999999 67789999999999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHH
Q 013505 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (441)
Q Consensus 271 ~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (441)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+.++
T Consensus 237 n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~ 316 (459)
T cd07089 237 SANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDR 316 (459)
T ss_pred CeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEE
Q 013505 351 FEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427 (441)
Q Consensus 351 ~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~as 427 (441)
+++++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++
T Consensus 317 v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~ 396 (459)
T cd07089 317 VEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGG 396 (459)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEE
Confidence 99999999999999999997644 36899999999 8999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHhhh
Q 013505 428 IFTRSPENIFKWL 440 (441)
Q Consensus 428 v~t~d~~~~~~~~ 440 (441)
|||+|.++++++.
T Consensus 397 v~t~d~~~~~~~~ 409 (459)
T cd07089 397 VWSADVDRAYRVA 409 (459)
T ss_pred EEcCCHHHHHHHH
Confidence 9999999998875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-85 Score=675.45 Aligned_cols=398 Identities=32% Similarity=0.581 Sum_probs=376.3
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (441)
++||+||+++++++.++.+|++++++.|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhH
Q 013505 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (441)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~ 197 (441)
..+++.++++++..+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 9999999999988877655443322 244567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeC
Q 013505 198 IAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277 (441)
Q Consensus 198 ~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~ 277 (441)
..+ .+++.++|+|+|++|+|+|+.++++.|+.|+++++|.||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 160 ~~l----~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 160 LLL----AEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHH----HHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECC
Confidence 875 6677889999999999999667899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHH
Q 013505 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357 (441)
Q Consensus 278 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~ 357 (441)
|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++.+++|+|+++++++||++++.+++++.++|++
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~ 315 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIES 315 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCEEEecCcccC-----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecC
Q 013505 358 IKSQGGKILTGGSVIE-----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431 (441)
Q Consensus 358 a~~~Ga~v~~gg~~~~-----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~ 431 (441)
++++|+++++||.... .+|+|++|||+ +++++|++++||+||||++|++|+|.+|||+++|+++|||+++|||+
T Consensus 316 a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~ 395 (457)
T cd07090 316 AKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTR 395 (457)
T ss_pred HHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcC
Confidence 9999999999997532 25899999999 79999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhhh
Q 013505 432 SPENIFKWL 440 (441)
Q Consensus 432 d~~~~~~~~ 440 (441)
|.+.++++.
T Consensus 396 d~~~~~~~~ 404 (457)
T cd07090 396 DLQRAHRVI 404 (457)
T ss_pred CHHHHHHHH
Confidence 999999875
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=674.21 Aligned_cols=397 Identities=31% Similarity=0.557 Sum_probs=375.0
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhh-CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWM-ELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE 116 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 116 (441)
++||+||+++++++.++.+|+++++++|++|++.|. .+|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999876 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhh
Q 013505 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (441)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~ 196 (441)
+..+++.++++++..+...+...+.. ++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999999988877766544432 34567788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEE
Q 013505 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (441)
Q Consensus 197 ~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV 275 (441)
+..+ .+++.++|+|+|++|+++| +.+.++.|+.||+++.|+||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 160 ~~~l----~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV 235 (454)
T cd07109 160 ALRL----AELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIV 235 (454)
T ss_pred HHHH----HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEE
Confidence 9875 5678899999999999999 7889999999999999999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 276 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+ .+++||++++.+.+++.+++
T Consensus 236 ~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i 314 (454)
T cd07109 236 FADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999986 68999999999999999999
Q ss_pred HHHHHCCCEEEecCcccC---CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecC
Q 013505 356 ENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~ 431 (441)
++++++|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+
T Consensus 315 ~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~ 394 (454)
T cd07109 315 ARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTR 394 (454)
T ss_pred HHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECC
Confidence 999999999999987533 36899999999 78999999999999999999999999999999999999999999999
Q ss_pred CHHHHHhhh
Q 013505 432 SPENIFKWL 440 (441)
Q Consensus 432 d~~~~~~~~ 440 (441)
|.+++++++
T Consensus 395 d~~~~~~~~ 403 (454)
T cd07109 395 DGDRALRVA 403 (454)
T ss_pred CHHHHHHHH
Confidence 999999875
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-85 Score=671.11 Aligned_cols=397 Identities=32% Similarity=0.561 Sum_probs=375.2
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHH
Q 013505 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEV 117 (441)
Q Consensus 39 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev 117 (441)
+||+||+++++++.++.+++++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999997 499
Q ss_pred HHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhH
Q 013505 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (441)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~ 197 (441)
..+++.+++++.+.++..+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 9999999999988777665444322 344567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEe
Q 013505 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276 (441)
Q Consensus 198 ~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~ 276 (441)
..+ .+++.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+|+.|++.++.+++|+++|+|||||+||+
T Consensus 161 ~~l----~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~ 236 (453)
T cd07115 161 LRI----AELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVF 236 (453)
T ss_pred HHH----HHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEEC
Confidence 875 5667889999999999999 67889999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHH
Q 013505 277 DDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE 356 (441)
Q Consensus 277 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~ 356 (441)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|++.|+++++++++|+|.++++++||++++.+++++.++|+
T Consensus 237 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 316 (453)
T cd07115 237 ADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVD 316 (453)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013505 357 NIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435 (441)
Q Consensus 357 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~ 435 (441)
+++++|+++++||......|+|++|||+ +++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.
T Consensus 317 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~ 396 (453)
T cd07115 317 VGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGR 396 (453)
T ss_pred HHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHH
Confidence 9999999999999764446899999999 789999999999999999999999999999999999999999999999999
Q ss_pred HHhhh
Q 013505 436 IFKWL 440 (441)
Q Consensus 436 ~~~~~ 440 (441)
+++|+
T Consensus 397 ~~~~~ 401 (453)
T cd07115 397 AHRVA 401 (453)
T ss_pred HHHHH
Confidence 98875
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-85 Score=668.93 Aligned_cols=395 Identities=32% Similarity=0.531 Sum_probs=370.6
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (441)
++||+||+++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhH
Q 013505 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (441)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~ 197 (441)
..+++.+++++.... .+...+. .++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEVIED-DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhh--cCccccC-CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999999887653 2222221 2344567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeC
Q 013505 198 IAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277 (441)
Q Consensus 198 ~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~ 277 (441)
..+++ ++.+ ++|+|++|+++|+.+.++.|++|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 158 ~~l~~----~~~~-~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~ 232 (446)
T cd07106 158 LKLGE----LAQE-VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHH----HHHH-hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECC
Confidence 88654 5555 399999999999767899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHH
Q 013505 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357 (441)
Q Consensus 278 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~ 357 (441)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~ 312 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED 312 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHH
Q 013505 358 IKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436 (441)
Q Consensus 358 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~ 436 (441)
+..+|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++
T Consensus 313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 392 (446)
T cd07106 313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA 392 (446)
T ss_pred HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 999999999999865456899999999 7999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 013505 437 FKWL 440 (441)
Q Consensus 437 ~~~~ 440 (441)
+++.
T Consensus 393 ~~~~ 396 (446)
T cd07106 393 EAVA 396 (446)
T ss_pred HHHH
Confidence 9875
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-85 Score=671.40 Aligned_cols=402 Identities=25% Similarity=0.426 Sum_probs=376.5
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHH
Q 013505 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEV 117 (441)
Q Consensus 39 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev 117 (441)
+||.||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+|||+.++. .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999985 599
Q ss_pred HHHHHHHHHHHHhhhhhc-CccccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCCh
Q 013505 118 QEVIDMCDFAVGLSRQLN-GSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194 (441)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p 194 (441)
..+++.+++++...+... ....+.. ......++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 999999999987766532 2222211 0123456788999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEE
Q 013505 195 LITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274 (441)
Q Consensus 195 ~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~i 274 (441)
+++..+++++.++|.++|+|+|++|+|+|+.++++.|+.||+|+.|.||||+.+|+.|.+.++++++|+++|+|||||+|
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i 240 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 99999999999999999999999999999668999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHH
Q 013505 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354 (441)
Q Consensus 275 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 354 (441)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++.+++|+|+++++++||++++.+++++.++
T Consensus 241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~ 320 (465)
T cd07098 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL 320 (465)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEe
Q 013505 355 IENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (441)
Q Consensus 355 v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~ 429 (441)
+++++.+|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+|.+|||+++|+++|||++|||
T Consensus 321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~ 400 (465)
T cd07098 321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF 400 (465)
T ss_pred HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999986532 25899999999 799999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHhhh
Q 013505 430 TRSPENIFKWL 440 (441)
Q Consensus 430 t~d~~~~~~~~ 440 (441)
|+|.+.++++.
T Consensus 401 t~d~~~~~~~~ 411 (465)
T cd07098 401 GKDIKRARRIA 411 (465)
T ss_pred cCCHHHHHHHH
Confidence 99999998874
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-85 Score=666.88 Aligned_cols=379 Identities=20% Similarity=0.256 Sum_probs=349.9
Q ss_pred CCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhh
Q 013505 53 ASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLS 131 (441)
Q Consensus 53 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~ 131 (441)
....|+++++++|++||+.|+.+|+.+|.++|+++++.|++|+++|+++++.|+|||..++.. |+..+++.++|+++..
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999999999999999999999999999975 9999999999999987
Q ss_pred hhhcCccc---cCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHH
Q 013505 132 RQLNGSVI---PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208 (441)
Q Consensus 132 ~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l 208 (441)
+...+... .........++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+ .+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l----~~l~ 162 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALL----AKLL 162 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH----HHHH
Confidence 76554211 1111233467889999999999999999999999999999999999999999999999876 5556
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHH
Q 013505 209 ERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSV 288 (441)
Q Consensus 209 ~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i 288 (441)
.+ ++|+|++|+|+|+.+.+..|+. +++++|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+
T Consensus 163 ~~-~lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i 240 (484)
T PLN02174 163 EQ-YLDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRI 240 (484)
T ss_pred HH-hCCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence 66 6999999999996666788886 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-hcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEe
Q 013505 289 LFAAV-GTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367 (441)
Q Consensus 289 ~~~~~-~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~ 367 (441)
++++| .|+||.|++++|||||+++||+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++
T Consensus 241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~ 318 (484)
T PLN02174 241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVY 318 (484)
T ss_pred HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEE
Confidence 99999 69999999999999999999999999999999999999988 78999999999999999999998 78999999
Q ss_pred cCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 368 GGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 368 gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||.. +..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 319 GG~~-~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~ 391 (484)
T PLN02174 319 GGEK-DRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFA 391 (484)
T ss_pred CCCc-CCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 9975 346899999999 89999999999999999999999999999999999999999999999999998874
|
|
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-85 Score=669.89 Aligned_cols=402 Identities=29% Similarity=0.510 Sum_probs=377.7
Q ss_pred CeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChh
Q 013505 34 PTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (441)
Q Consensus 34 ~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (441)
.+++++||+||+++++++.++.+|++++++.|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4688999999999999999999999999999999998 49999999999999999999999999999999999999999
Q ss_pred hhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecC
Q 013505 112 EGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190 (441)
Q Consensus 112 ~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps 190 (441)
++.. |+..+++.+++++...+.+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTG-PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 9975 999999999999988877665543322 34456778999999999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhh-ccCCceeecCC
Q 013505 191 PTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH-QRFGKCLLELS 268 (441)
Q Consensus 191 ~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~-~~~~~~~lelg 268 (441)
+.+|.++..+ .++|.++|+|+|++|+|+| +.+.++.|+.|++++.|.||||+.+|+.|++.++ .++||+++|+|
T Consensus 161 ~~~p~~~~~l----~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelg 236 (462)
T cd07112 161 EQSPLTALRL----AELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECG 236 (462)
T ss_pred CCCCHHHHHH----HHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCC
Confidence 9999999876 5668899999999999999 7789999999999999999999999999999988 48999999999
Q ss_pred CCCeEEEeCCC-CHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhH
Q 013505 269 GNNAIIIMDDA-DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPES 347 (441)
Q Consensus 269 G~~~~iV~~da-dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~ 347 (441)
||||+||++|+ |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+
T Consensus 237 G~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~ 316 (462)
T cd07112 237 GKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAH 316 (462)
T ss_pred CCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHH
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCc
Q 013505 348 RKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL 424 (441)
Q Consensus 348 ~~~~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl 424 (441)
++++.++|++++++|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+|.+|||+++|+++|||
T Consensus 317 ~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL 396 (462)
T cd07112 317 FDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGL 396 (462)
T ss_pred HHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccc
Confidence 99999999999999999999997532 25899999999 7899999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHhhh
Q 013505 425 SSSIFTRSPENIFKWL 440 (441)
Q Consensus 425 ~asv~t~d~~~~~~~~ 440 (441)
++||||+|.+++++++
T Consensus 397 ~~~i~t~d~~~~~~~~ 412 (462)
T cd07112 397 AASVWTSDLSRAHRVA 412 (462)
T ss_pred eEEEEcCCHHHHHHHH
Confidence 9999999999998874
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-85 Score=668.70 Aligned_cols=396 Identities=26% Similarity=0.447 Sum_probs=370.0
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHH
Q 013505 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQ 118 (441)
Q Consensus 39 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 118 (441)
.||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcCcc-ccCCCC-CceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhh
Q 013505 119 EVIDMCDFAVGLSRQLNGSV-IPSERP-NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (441)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~ 196 (441)
.+++.+++++....+..+.. .+...+ ....+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 160 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT 160 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999998877654332 111111 2356788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEE
Q 013505 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (441)
Q Consensus 197 ~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV 275 (441)
+..+ .+++.++|+|+|++|+++| +.+.++.|++| ++.|.||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 161 ~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV 234 (454)
T cd07101 161 ALWA----VELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIV 234 (454)
T ss_pred HHHH----HHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEE
Confidence 9875 5668889999999999999 78889999987 578999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 276 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++++++
T Consensus 235 ~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v 314 (454)
T cd07101 235 LEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEecCcccC-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCH
Q 013505 356 ENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~ 433 (441)
++++++|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.
T Consensus 315 ~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 394 (454)
T cd07101 315 DDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDG 394 (454)
T ss_pred HHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999999999997532 35799999999 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhh
Q 013505 434 ENIFKWL 440 (441)
Q Consensus 434 ~~~~~~~ 440 (441)
++++++.
T Consensus 395 ~~a~~~~ 401 (454)
T cd07101 395 ARGRRIA 401 (454)
T ss_pred HHHHHHH
Confidence 9998874
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-85 Score=668.15 Aligned_cols=398 Identities=28% Similarity=0.474 Sum_probs=374.1
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHH
Q 013505 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQ 118 (441)
Q Consensus 39 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 118 (441)
+||+||+++++++.++.+|++++++.|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHH
Q 013505 119 EVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198 (441)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~ 198 (441)
..++.+++++...+...+........+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999998877654433222223445677899999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCC
Q 013505 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (441)
Q Consensus 199 ~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~d 278 (441)
.+ .++|.++|+|+|++|+|+|+.+.+..|+.||+|+.|.||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 ~l----~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~d 236 (452)
T cd07102 161 RF----AAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236 (452)
T ss_pred HH----HHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCC
Confidence 64 67788999999999999994489999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHH
Q 013505 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (441)
Q Consensus 279 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (441)
||++.|++.+++|+|+|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+++..+.++++++++++
T Consensus 237 ADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a 316 (452)
T cd07102 237 ADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADA 316 (452)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCEEEecCccc---CCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013505 359 KSQGGKILTGGSVI---ESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (441)
Q Consensus 359 ~~~Ga~v~~gg~~~---~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~ 434 (441)
+++|+++++||... +..|+|++|||+ +++++|+++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+
T Consensus 317 ~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 396 (452)
T cd07102 317 IAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIA 396 (452)
T ss_pred HhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 99999999999753 246899999999 89999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 013505 435 NIFKWL 440 (441)
Q Consensus 435 ~~~~~~ 440 (441)
++.+|+
T Consensus 397 ~~~~~~ 402 (452)
T cd07102 397 RAEALG 402 (452)
T ss_pred HHHHHH
Confidence 998874
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-84 Score=665.12 Aligned_cols=389 Identities=33% Similarity=0.536 Sum_probs=367.6
Q ss_pred CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHH
Q 013505 44 NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDM 123 (441)
Q Consensus 44 g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~ 123 (441)
|+++++++.++.+++++++++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhH-HHHHH
Q 013505 124 CDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT-IAITK 202 (441)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~-~~l~~ 202 (441)
+++++...+...+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ ..
T Consensus 81 l~~~~~~~~~~~~~~~~~~-~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~--- 156 (443)
T cd07152 81 LHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVV--- 156 (443)
T ss_pred HHHHHHhHHHhCCcccccc-CCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHH---
Confidence 9999987665544433322 344567889999999999999999999999999999999999999999999996 43
Q ss_pred HHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHH
Q 013505 203 LVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIK 282 (441)
Q Consensus 203 li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~ 282 (441)
+.++|.++|+|+|++|+++|+.+.+..|+.||+++.|+||||+.+|+.|.+.++++++++++|+|||||+||++|||++
T Consensus 157 -l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 157 -IARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred -HHHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHH
Confidence 4788899999999999999977889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCC
Q 013505 283 LAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362 (441)
Q Consensus 283 ~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~G 362 (441)
.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++.+.+||++++.+++++.++|++++++|
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G 315 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAG 315 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 363 GKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 363 a~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++++||.. +|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++.
T Consensus 316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~ 391 (443)
T cd07152 316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALA 391 (443)
T ss_pred CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHH
Confidence 999999974 5899999999 79999999999999999999999999999999999999999999999999998874
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-84 Score=666.73 Aligned_cols=395 Identities=29% Similarity=0.527 Sum_probs=373.0
Q ss_pred eeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHH
Q 013505 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE 116 (441)
Q Consensus 37 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 116 (441)
+++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 81 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARVE 81 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCccccCCC----CCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCC
Q 013505 117 VQEVIDMCDFAVGLSRQLNGSVIPSER----PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 192 (441)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~ 192 (441)
+..+++.+++++...+...+...+... .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 82 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~ 161 (453)
T cd07094 82 VDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASK 161 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999888776654443321 2345677899999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCC
Q 013505 193 TPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (441)
Q Consensus 193 ~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~ 271 (441)
+|+++..+ .+++.++|+|+|++|+++| +.++++.|++||+++.|.||||+.+|+.|++.+ .++|+++|+||||
T Consensus 162 ~p~~~~~l----~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~ 235 (453)
T cd07094 162 TPLSALEL----AKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNA 235 (453)
T ss_pred chHHHHHH----HHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCC
Confidence 99999876 5667788999999999999 677899999999999999999999999999987 5799999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHH
Q 013505 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (441)
Q Consensus 272 ~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (441)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++.+||++++.+.+++
T Consensus 236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 315 (453)
T cd07094 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERV 315 (453)
T ss_pred ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013505 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (441)
Q Consensus 352 ~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t 430 (441)
++++++|+++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||
T Consensus 316 ~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 392 (453)
T cd07094 316 ERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFT 392 (453)
T ss_pred HHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEEC
Confidence 99999999999999999864 5889999999 7999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhh
Q 013505 431 RSPENIFKWL 440 (441)
Q Consensus 431 ~d~~~~~~~~ 440 (441)
+|.++++++.
T Consensus 393 ~d~~~a~~~~ 402 (453)
T cd07094 393 RDLNVAFKAA 402 (453)
T ss_pred CCHHHHHHHH
Confidence 9999998875
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-84 Score=667.03 Aligned_cols=412 Identities=31% Similarity=0.540 Sum_probs=386.4
Q ss_pred CCceecCeeccC-CCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCC-CHHHHHHHHHHHHHHHHhhHHHH
Q 013505 21 PGCFVNGKWKAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMEL-PAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 21 ~~~~I~g~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
+++||||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++|++.|+++ +.++|.++|+++++.|++++++|
T Consensus 2 ~~~~i~g~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el 81 (473)
T cd07082 2 FKYLINGEWKESSGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEV 81 (473)
T ss_pred CCceECCEEecCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 357999999864 5789999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCC----CCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER----PNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++++++|+|||..++..|+..+++.++++++..+.+.+...+... .+...+.+++|+|||++|+|||||+...+++
T Consensus 82 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (473)
T cd07082 82 ANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSK 161 (473)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHH
Confidence 999999999999999999999999999999888776555433211 2445678899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|.++..+ .++|.++|+|+|++|+++| +.++++.|+.|++++.|+||||+.+|+.|+
T Consensus 162 i~~AL~aGN~vilKps~~~~~~~~~l----~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~ 237 (473)
T cd07082 162 LIPALIMGNTVVFKPATQGVLLGIPL----AEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLK 237 (473)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHH----HHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999875 6678889999999999999 777899999999999999999999999999
Q ss_pred HHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 254 ~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 238 ~~a~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~ 315 (473)
T cd07082 238 KQHP--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPW 315 (473)
T ss_pred HHhC--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9876 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHH
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~e 412 (441)
++++++||++++.+++++.++++++..+|+++++||... .|+|++|||+ +++++|++++||+||||++|++|+|++|
T Consensus 316 ~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~e 393 (473)
T cd07082 316 DNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEE 393 (473)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHH
Confidence 999999999999999999999999999999999999763 3899999999 7999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 413 AVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 413 ai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||+++|+++|||+++|||+|.+.++++.
T Consensus 394 ai~~~n~~~~gL~~~v~t~d~~~~~~~~ 421 (473)
T cd07082 394 AIELANKSNYGLQASIFTKDINKARKLA 421 (473)
T ss_pred HHHHHhCCCCCceEEEEeCCHHHHHHHH
Confidence 9999999999999999999999998874
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-84 Score=667.70 Aligned_cols=399 Identities=31% Similarity=0.562 Sum_probs=375.8
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (441)
++||+||+++++++.++.+++++++++|++|++ .|+.+|.++|.++|+++++.|.+++++|++++++|+|||+.+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999997 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChh
Q 013505 116 EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195 (441)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~ 195 (441)
|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999998877665544433223445678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEE
Q 013505 196 ITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAII 274 (441)
Q Consensus 196 ~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~i 274 (441)
++..+ .++|.++|+|+|+||+|+| +.+.++.|+.|+++++|.||||+.+|+.+++.++++++|+++|+|||||+|
T Consensus 161 ~~~~l----~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~i 236 (457)
T cd07114 161 STLEL----AKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNI 236 (457)
T ss_pred HHHHH----HHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeE
Confidence 99876 5667889999999999999 677899999999999999999999999999999999999999999999999
Q ss_pred EeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHH
Q 013505 275 IMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354 (441)
Q Consensus 275 V~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 354 (441)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+.+++.++
T Consensus 237 V~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 316 (457)
T cd07114 237 VFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERY 316 (457)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEe
Q 013505 355 IENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (441)
Q Consensus 355 v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~ 429 (441)
+++++++|+++++||...+ ..|+|++|||+ ++++++++++||+||||++|++|+|.+|||+++|+++|||++|||
T Consensus 317 i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~if 396 (457)
T cd07114 317 VARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIW 396 (457)
T ss_pred HHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEE
Confidence 9999999999999997643 35899999999 789999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHhhh
Q 013505 430 TRSPENIFKWL 440 (441)
Q Consensus 430 t~d~~~~~~~~ 440 (441)
|+|.+.+++++
T Consensus 397 t~d~~~~~~~~ 407 (457)
T cd07114 397 TRDLARAHRVA 407 (457)
T ss_pred CCCHHHHHHHH
Confidence 99999998874
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-84 Score=664.90 Aligned_cols=397 Identities=27% Similarity=0.444 Sum_probs=372.3
Q ss_pred ecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHH
Q 013505 39 INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQ 118 (441)
Q Consensus 39 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~ 118 (441)
+||+||+++++++.++.+|+++++++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcCcc-ccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChh
Q 013505 119 EVIDMCDFAVGLSRQLNGSV-IPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195 (441)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~ 195 (441)
.+++.+++++...+++.+.. .+.. .++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999998877654332 2211 13445678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEE
Q 013505 196 ITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (441)
Q Consensus 196 ~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV 275 (441)
++..+ .++|.++|+|+|++|+++|+.+.+..|++| .++.|+||||+++|+.|++.++++++|+++|+|||||+||
T Consensus 161 ~~~~l----~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV 235 (453)
T cd07099 161 VGELL----AEAWAAAGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIV 235 (453)
T ss_pred HHHHH----HHHHHHcCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEE
Confidence 98865 677889999999999999955889999987 5999999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 276 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+.+++.+++
T Consensus 236 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i 315 (453)
T cd07099 236 LADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHV 315 (453)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013505 356 ENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~ 434 (441)
++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+
T Consensus 316 ~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 395 (453)
T cd07099 316 DDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLA 395 (453)
T ss_pred HHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 99999999999999764346899999999 79999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 013505 435 NIFKWL 440 (441)
Q Consensus 435 ~~~~~~ 440 (441)
+++++.
T Consensus 396 ~~~~~~ 401 (453)
T cd07099 396 RAEAIA 401 (453)
T ss_pred HHHHHH
Confidence 998874
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-84 Score=665.50 Aligned_cols=397 Identities=32% Similarity=0.548 Sum_probs=372.3
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh-hhhhHH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL-PEGIGE 116 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~e 116 (441)
++||.||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+ .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 688899
Q ss_pred HHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhh
Q 013505 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (441)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~ 196 (441)
+..+++.+++++.....+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 99999999999988776665544432 34456778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEE
Q 013505 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (441)
Q Consensus 197 ~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV 275 (441)
+..+++ ++.++ +|+|++|+++| +.+.++.|+.||+++.|.||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 160 ~~~l~~----~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV 234 (457)
T cd07108 160 VLLLAE----ILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIV 234 (457)
T ss_pred HHHHHH----HHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEE
Confidence 987654 45554 99999999998 7788999999999999999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHH-HHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHH
Q 013505 276 MDDADIKLAVRSVLFA-AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354 (441)
Q Consensus 276 ~~dadl~~aa~~i~~~-~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 354 (441)
++|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+.+++.++
T Consensus 235 ~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~ 314 (457)
T cd07108 235 FPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGY 314 (457)
T ss_pred CCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 9999999999999999 599999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-CCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 013505 355 IENIKS-QGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428 (441)
Q Consensus 355 v~~a~~-~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv 428 (441)
++++++ +|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||
T Consensus 315 i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~v 394 (457)
T cd07108 315 IDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYV 394 (457)
T ss_pred HHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEE
Confidence 999998 9999999997642 35899999999 78999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHhhh
Q 013505 429 FTRSPENIFKWL 440 (441)
Q Consensus 429 ~t~d~~~~~~~~ 440 (441)
||+|.+++++|.
T Consensus 395 ft~d~~~a~~~~ 406 (457)
T cd07108 395 WTRDLGRALRAA 406 (457)
T ss_pred EcCCHHHHHHHH
Confidence 999999999874
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-84 Score=665.42 Aligned_cols=396 Identities=31% Similarity=0.518 Sum_probs=371.1
Q ss_pred EeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH
Q 013505 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (441)
Q Consensus 36 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (441)
++++||+||+++++++.++.+|+++++++|++|++.|+++|..+|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccccCC----CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCC
Q 013505 116 EVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (441)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~ 191 (441)
|+..+++.+++++.......+...... ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999887766544432211 1233456788999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCC
Q 013505 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (441)
Q Consensus 192 ~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~ 271 (441)
.+|.++..+ .++|.++|+|+|++|+++|+.+.+..|+.||+++.|.||||+.+|+.|++.++ .+|+++|+||||
T Consensus 161 ~~p~~~~~l----~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~~ 234 (452)
T cd07147 161 RTPLSALIL----GEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGNA 234 (452)
T ss_pred CCcHHHHHH----HHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCCC
Confidence 999999875 56688899999999999996678999999999999999999999999999876 479999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHH
Q 013505 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (441)
Q Consensus 272 ~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (441)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++.+||++++.+.+++
T Consensus 235 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~ 314 (452)
T cd07147 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERV 314 (452)
T ss_pred cEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013505 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (441)
Q Consensus 352 ~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t 430 (441)
.+++++++++|+++++||.. +|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||
T Consensus 315 ~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t 391 (452)
T cd07147 315 EGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFT 391 (452)
T ss_pred HHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999975 5899999999 7999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhh
Q 013505 431 RSPENIFKWL 440 (441)
Q Consensus 431 ~d~~~~~~~~ 440 (441)
+|.++++++.
T Consensus 392 ~d~~~a~~~~ 401 (452)
T cd07147 392 RDLEKALRAW 401 (452)
T ss_pred CCHHHHHHHH
Confidence 9999998874
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-84 Score=663.38 Aligned_cols=397 Identities=33% Similarity=0.563 Sum_probs=371.8
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GE 116 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 116 (441)
++||+||+++++++.++.+|++++++.|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998764 59
Q ss_pred HHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhh
Q 013505 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (441)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~ 196 (441)
+..+++.+++++...+.+.+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999999987776654432222234456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEE
Q 013505 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (441)
Q Consensus 197 ~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV 275 (441)
+..+ .++|.+ |+|+|++|+++| +.+.++.|++|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 161 ~~~l----~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV 235 (450)
T cd07092 161 TLLL----AELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIV 235 (450)
T ss_pred HHHH----HHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEE
Confidence 9876 555666 999999999998 6668999999999999999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 276 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+.+++.+++
T Consensus 236 ~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i 315 (450)
T cd07092 236 FDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFV 315 (450)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013505 356 ENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~ 434 (441)
+++. +|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+
T Consensus 316 ~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~ 394 (450)
T cd07092 316 ERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVG 394 (450)
T ss_pred HHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9999 999999999865557899999999 78999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 013505 435 NIFKWL 440 (441)
Q Consensus 435 ~~~~~~ 440 (441)
++++++
T Consensus 395 ~~~~~~ 400 (450)
T cd07092 395 RAMRLS 400 (450)
T ss_pred HHHHHH
Confidence 998874
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-84 Score=662.09 Aligned_cols=399 Identities=35% Similarity=0.589 Sum_probs=377.5
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHH
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEV 117 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 117 (441)
++||.||+++++++.++.++++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhH
Q 013505 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197 (441)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~ 197 (441)
..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999998887766655444333455677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEe
Q 013505 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIM 276 (441)
Q Consensus 198 ~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~ 276 (441)
..+ .++|.++|+|+|++|+++| +.+.++.|+.|++++.|+||||+.+|+.|.+.++++++|+++|+|||||+||+
T Consensus 161 ~~l----~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 161 LAL----AELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVF 236 (451)
T ss_pred HHH----HHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEEC
Confidence 875 5667889999999999999 67888999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHH
Q 013505 277 DDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE 356 (441)
Q Consensus 277 ~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~ 356 (441)
+|||++.|++.+++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++.+++||++++.+.+++.++++
T Consensus 237 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~ 316 (451)
T cd07103 237 DDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVE 316 (451)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013505 357 NIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435 (441)
Q Consensus 357 ~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~ 435 (441)
+++.+|+++++||...+.+|+|++|||+ +++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.++
T Consensus 317 ~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 396 (451)
T cd07103 317 DAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLAR 396 (451)
T ss_pred HHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 9999999999999765447899999999 799999999999999999999999999999999999999999999999999
Q ss_pred HHhhh
Q 013505 436 IFKWL 440 (441)
Q Consensus 436 ~~~~~ 440 (441)
++++.
T Consensus 397 ~~~~~ 401 (451)
T cd07103 397 AWRVA 401 (451)
T ss_pred HHHHH
Confidence 99874
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-83 Score=657.86 Aligned_cols=392 Identities=29% Similarity=0.499 Sum_probs=367.2
Q ss_pred eeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHH
Q 013505 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE 116 (441)
Q Consensus 37 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 116 (441)
+++||+||+++++++.++.+++++++++|+++ |+.+|+.+|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 57899999999999999999999999999865 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCccccCC----CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCC
Q 013505 117 VQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 192 (441)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~ 192 (441)
+..+++.+++++.......++..+.. ..+...+.+++|+|||++|+|||||++..++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999887766554433221 12345677899999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCC
Q 013505 193 TPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (441)
Q Consensus 193 ~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~ 271 (441)
+|+++..+ .++|.++|+|+|++|+++| +.++++.|++||+++.|.||||+.+|+.|.+.++ .+++++|+||||
T Consensus 159 ~p~~~~~l----~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~ 232 (451)
T cd07146 159 TPLSAIYL----ADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGND 232 (451)
T ss_pred chHHHHHH----HHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCc
Confidence 99998765 6678899999999999999 6788999999999999999999999999998876 689999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHH
Q 013505 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (441)
Q Consensus 272 ~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (441)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v 312 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQI 312 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013505 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (441)
Q Consensus 352 ~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t 430 (441)
++++++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++|||
T Consensus 313 ~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 389 (451)
T cd07146 313 ENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT 389 (451)
T ss_pred HHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999964 5899999999 7899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhh
Q 013505 431 RSPENIFKWL 440 (441)
Q Consensus 431 ~d~~~~~~~~ 440 (441)
+|.+++++|.
T Consensus 390 ~d~~~~~~~~ 399 (451)
T cd07146 390 NDLDTIKRLV 399 (451)
T ss_pred CCHHHHHHHH
Confidence 9999998875
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-83 Score=652.76 Aligned_cols=377 Identities=31% Similarity=0.537 Sum_probs=354.9
Q ss_pred HHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcC-
Q 013505 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG- 136 (441)
Q Consensus 58 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~- 136 (441)
+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++...++..+
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999988877643
Q ss_pred ccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCc
Q 013505 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216 (441)
Q Consensus 137 ~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~g 216 (441)
...+. ++...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+ .++|.++|+|+|
T Consensus 81 ~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l----~~~l~~aglP~g 154 (429)
T cd07100 81 EPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAI----EELFREAGFPEG 154 (429)
T ss_pred eeccC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHcCCCcC
Confidence 32332 234567889999999999999999999999999999999999999999999999875 677889999999
Q ss_pred eEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcC
Q 013505 217 IFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTA 296 (441)
Q Consensus 217 vv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~ 296 (441)
++|+|+|+.+.+..|+.|++|+.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 155 vv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 155 VFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred cEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 99999995567889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCC
Q 013505 297 GQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376 (441)
Q Consensus 297 Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g 376 (441)
||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++++.+++++.+++++++++|+++++||...+..|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997654468
Q ss_pred ceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 377 ~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|||+ +++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+++++++
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 379 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA 379 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 99999999 78999999999999999999999999999999999999999999999999998874
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-83 Score=650.10 Aligned_cols=379 Identities=28% Similarity=0.475 Sum_probs=355.6
Q ss_pred HHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcC
Q 013505 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136 (441)
Q Consensus 57 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~ 136 (441)
|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||+.++..|+..+++.+++++.......+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999887766654
Q ss_pred ccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCc
Q 013505 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216 (441)
Q Consensus 137 ~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~g 216 (441)
..... .++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+ .++|.++|+|+|
T Consensus 81 ~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l----~~~~~~ag~P~g 155 (431)
T cd07095 81 ERATP-MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELM----VELWEEAGLPPG 155 (431)
T ss_pred CcccC-CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHH----HHHHHHhCcChh
Confidence 43322 2345677889999999999999999999999999999999999999999999999865 677889999999
Q ss_pred eEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc-CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhc
Q 013505 217 IFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR-FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (441)
Q Consensus 217 vv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~-~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 295 (441)
++|+++|+.+.++.|++|++++.|.||||+.+|+.|++.++.+ .+++++|+|||||+||++|||++.|++.+++++|.|
T Consensus 156 ~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~ 235 (431)
T cd07095 156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLT 235 (431)
T ss_pred HheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHh
Confidence 9999999778899999999999999999999999999987644 689999999999999999999999999999999999
Q ss_pred CCCCccCcceEEEecc-cHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCC
Q 013505 296 AGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374 (441)
Q Consensus 296 ~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~ 374 (441)
+||.|++++|||||++ ++|+|+++|+++++++++|+|.++.+.+||+++..+++++.+++++++++|+++++||...+.
T Consensus 236 ~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~ 315 (431)
T cd07095 236 AGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVA 315 (431)
T ss_pred CCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCC
Confidence 9999999999999999 999999999999999999999999999999999999999999999999999999999976555
Q ss_pred CCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 375 EGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 375 ~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+|++|||++++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++.
T Consensus 316 ~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~ 381 (431)
T cd07095 316 GTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFL 381 (431)
T ss_pred CCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 799999999998889999999999999999999999999999999999999999999999998874
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-83 Score=695.65 Aligned_cols=421 Identities=28% Similarity=0.462 Sum_probs=386.2
Q ss_pred HHHHhccCCCCCCCceecCeeccCCCeEeeecCCCCc-eEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHH
Q 013505 9 EFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQ-KIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (441)
Q Consensus 9 ~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~tg~-~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (441)
++++.........+.+||| ++..++++||+|++ ++++++.++.+++++|+++|++|++.|+.+|+.+|.++|+++
T Consensus 541 ~al~~~~~~~~~~~~~i~g----~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~ka 616 (1038)
T PRK11904 541 AAIAAFLEKQWQAGPIING----EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERA 616 (1038)
T ss_pred HHHHHHHhcCceecceEcC----CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3444454444566678888 56789999999987 999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCcc--ccCCCCCceeEEEEeccceEEEEcCCC
Q 013505 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSV--IPSERPNHMMLETWNPLGVVGVITAFN 165 (441)
Q Consensus 88 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~i~p~n 165 (441)
++.|++++++|+.++++|+|||+.++..|+..++++|+||+...+...+.. ++. .++...+..++|+|||++|+|||
T Consensus 617 Adll~~~~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g-~~ge~n~~~~~P~GVv~~IsPwN 695 (1038)
T PRK11904 617 ADLLEANRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPG-PTGESNELRLHGRGVFVCISPWN 695 (1038)
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCC-CCCceeEEEEecceEEEEECCCc
Confidence 999999999999999999999999999999999999999999888765432 222 13456678899999999999999
Q ss_pred chHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeC
Q 013505 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (441)
Q Consensus 166 ~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (441)
||+...++++++||++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.++++.|+.||+|++|+|||
T Consensus 696 fPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l----~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTG 771 (1038)
T PRK11904 696 FPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEA----VKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTG 771 (1038)
T ss_pred cHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHH----HHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEEC
Confidence 99999999999999999999999999999999875 5678899999999999999 777999999999999999999
Q ss_pred ChHHHHHHHHHhhcc---CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHH
Q 013505 245 STKVGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321 (441)
Q Consensus 245 s~~~g~~i~~~a~~~---~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~ 321 (441)
|+.+|+.|.+.++.+ .+|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+++|+
T Consensus 772 S~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~ 851 (1038)
T PRK11904 772 STETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLK 851 (1038)
T ss_pred CHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHH
Confidence 999999999988765 67899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEEEcCCCCCcccccccc
Q 013505 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIVEISPTADIVKEELFA 399 (441)
Q Consensus 322 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~i~~eE~fg 399 (441)
++++++++|+|.+.++++||++++.+.+++.++|+++.+ |+++++||...+ ..|+|++|||+.+ +++.+++||+||
T Consensus 852 ~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~-~~~~~~~eEiFG 929 (1038)
T PRK11904 852 GAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI-DSISQLEREVFG 929 (1038)
T ss_pred HHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc-CCcHHhCCCCcC
Confidence 999999999999999999999999999999999999876 899999997643 2599999999964 567789999999
Q ss_pred ceEEEEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 400 PVLYVMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 400 Pv~~v~~~~--~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||++|++|+ +++|+|+++|+++|||+++|||+|.+.++++.
T Consensus 930 PVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~ 972 (1038)
T PRK11904 930 PILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIA 972 (1038)
T ss_pred cEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHH
Confidence 999999998 69999999999999999999999999998874
|
|
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-82 Score=649.98 Aligned_cols=398 Identities=29% Similarity=0.522 Sum_probs=373.5
Q ss_pred eecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-H
Q 013505 38 SINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-E 116 (441)
Q Consensus 38 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-e 116 (441)
.+||+||+++++++.++.+++++++++|++|++.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++. |
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 369999999999999999999999999999999999999999999999999999999999999999999999988854 9
Q ss_pred HHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhh
Q 013505 117 VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196 (441)
Q Consensus 117 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~ 196 (441)
+..+++.+++++.......+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYPQD-GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCccccCC-CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 99999999999887766544433322 24456778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEE
Q 013505 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII 275 (441)
Q Consensus 197 ~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV 275 (441)
+..+ .++|.++|+|+|+||+++| +.+.++.|+.|++++.|.||||+.+|+.|++.++++++|+++|+|||||+||
T Consensus 160 ~~~l----~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV 235 (455)
T cd07093 160 AWLL----AELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIV 235 (455)
T ss_pred HHHH----HHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEE
Confidence 8875 6678899999999999998 7889999999999999999999999999999999999999999999999999
Q ss_pred eCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 276 MDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 276 ~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++.+++||++++.+.+++.+++
T Consensus 236 ~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 315 (455)
T cd07093 236 FADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYV 315 (455)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013505 356 ENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t 430 (441)
++++.+|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|.+|||+++|+++|||+++|||
T Consensus 316 ~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t 395 (455)
T cd07093 316 ELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWT 395 (455)
T ss_pred HHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999997643 35899999999 7899999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhh
Q 013505 431 RSPENIFKWL 440 (441)
Q Consensus 431 ~d~~~~~~~~ 440 (441)
+|.+.++++.
T Consensus 396 ~d~~~~~~~~ 405 (455)
T cd07093 396 RDLGRAHRVA 405 (455)
T ss_pred CCHHHHHHHH
Confidence 9999998874
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-82 Score=648.98 Aligned_cols=396 Identities=32% Similarity=0.580 Sum_probs=370.5
Q ss_pred EeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH
Q 013505 36 VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115 (441)
Q Consensus 36 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 115 (441)
++++||+||+++++++.++.+++++++++|++|++.|+++|..+|.++|+++++.|+++.++|++++++|+|||..++..
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccccCC----CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCC
Q 013505 116 EVQEVIDMCDFAVGLSRQLNGSVIPSE----RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (441)
Q Consensus 116 ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~ 191 (441)
|+..+++.+++++...+...+...+.. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999887766654433321 1123456789999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCC
Q 013505 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (441)
Q Consensus 192 ~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 270 (441)
.+|.++..+ .+++.++|+|+|++|+++| +.+++..|+.||++++|.||||+.+|+.|++.++ ++++++|+|||
T Consensus 161 ~~p~~~~~l----~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk 234 (453)
T cd07149 161 QTPLSALKL----AELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSN 234 (453)
T ss_pred cchHHHHHH----HHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCC
Confidence 999999875 6667889999999999999 6667999999999999999999999999999875 78999999999
Q ss_pred CeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHH
Q 013505 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (441)
Q Consensus 271 ~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (441)
||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++.+++|+|.++++++||++++.+.++
T Consensus 235 ~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 314 (453)
T cd07149 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAER 314 (453)
T ss_pred ceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEe
Q 013505 351 FEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429 (441)
Q Consensus 351 ~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~ 429 (441)
+.+++++++.+|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++||
T Consensus 315 ~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~ 391 (453)
T cd07149 315 IEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVF 391 (453)
T ss_pred HHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence 999999999999999999865 5899999999 788999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHhhh
Q 013505 430 TRSPENIFKWL 440 (441)
Q Consensus 430 t~d~~~~~~~~ 440 (441)
|+|.++++++.
T Consensus 392 t~d~~~~~~~~ 402 (453)
T cd07149 392 TNDLQKALKAA 402 (453)
T ss_pred cCCHHHHHHHH
Confidence 99999988874
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-82 Score=650.33 Aligned_cols=393 Identities=21% Similarity=0.309 Sum_probs=353.1
Q ss_pred eeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-
Q 013505 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG- 115 (441)
Q Consensus 37 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~- 115 (441)
.-+||+||+++++++.++. ++++++|++||+.|+++|+.+|.++|++++++|++|+++|+++++.|+|||+.++..
T Consensus 68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~ 144 (551)
T TIGR02288 68 GERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQA 144 (551)
T ss_pred cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhc
Confidence 4579999999999999986 899999999999999999999999999999999999999999999999999998853
Q ss_pred ----HHHHHHHHHHHHHHhhhhhcCccc---cCCCCCcee---EEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEE
Q 013505 116 ----EVQEVIDMCDFAVGLSRQLNGSVI---PSERPNHMM---LETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCV 185 (441)
Q Consensus 116 ----ev~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~V 185 (441)
+..+.++.++|++.....+.+... +........ ...++|+|||++|+|||||+++.++++++||++||+|
T Consensus 145 gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~V 224 (551)
T TIGR02288 145 GGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPV 224 (551)
T ss_pred cChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeE
Confidence 778889999999888776655432 211111112 2368999999999999999999999999999999999
Q ss_pred EEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCce
Q 013505 186 VWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG--GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (441)
Q Consensus 186 Vlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g--~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (441)
|+|||+.+|+++..+.+++.++|.++|+|+|+||+|+| +.++++.|+.||+|+.|.||||+.+|+.|.+.++ .+++
T Consensus 225 VlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v 302 (551)
T TIGR02288 225 LVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQV 302 (551)
T ss_pred EEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcE
Confidence 99999999999988888889999999999999999997 5688999999999999999999999999999877 4799
Q ss_pred eecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecc---------cHHHHHHHHHHHHHhhccCCCCC
Q 013505 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES---------IYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 264 ~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
++|+|||||+||++|+|++.+++.+++|+|.|+||.|++++|||||++ +||+|+++|+++++++ +|||.+
T Consensus 303 ~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~ 381 (551)
T TIGR02288 303 YTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPAR 381 (551)
T ss_pred EeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccc
Confidence 999999999999999999999999999999999999999999999999 7999999999999999 999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC---CCC-ceEeeEEEEcCC-CCCccccccccceEEEEEeCC
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEG-NFVQPTIVEISP-TADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~---~~g-~~~~Ptvl~~~~-~~~i~~eE~fgPv~~v~~~~~ 409 (441)
..+++||++++.+++++ +++++.| ++++||.... ..| +|++|||+++++ +|++++||+||||++|++|+|
T Consensus 382 ~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d 456 (551)
T TIGR02288 382 ATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDD 456 (551)
T ss_pred ccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECC
Confidence 99999999999999995 6677788 6666665421 134 688999996664 999999999999999999999
Q ss_pred HHHHHHHHhcC--CCC-cEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSV--PQG-LSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~--~~g-l~asv~t~d~~~~~~~~ 440 (441)
.+|||+++|++ +|| |++||||+|.++++++.
T Consensus 457 ~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~ 490 (551)
T TIGR02288 457 GAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQ 490 (551)
T ss_pred HHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHH
Confidence 99999999998 566 99999999999988764
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-82 Score=692.78 Aligned_cols=402 Identities=29% Similarity=0.485 Sum_probs=373.3
Q ss_pred CCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 21 PGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 21 ~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
...+|+|+ ...+..++++||+| ++++++++.++.+|++.|+++|++|++.|+.+|+.+|.++|+++++.|++++++|+
T Consensus 647 ~~p~~~~~-~~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~ 725 (1318)
T PRK11809 647 AAPMLEDP-VAAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLM 725 (1318)
T ss_pred cCCcccCc-CCCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 34566773 33567899999998 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhh
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIAL 179 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~AL 179 (441)
.++++|+|||+.++..|+..++++|+||+...+.... ...++|+|||++|+|||||+..+++++++||
T Consensus 726 ~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~------------~~~~~PlGVV~~IsPWNFPlai~~g~iaaAL 793 (1318)
T PRK11809 726 GLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD------------NDTHRPLGPVVCISPWNFPLAIFTGQVAAAL 793 (1318)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceeecccEEEEECCCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987654210 1358899999999999999999999999999
Q ss_pred cCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhc
Q 013505 180 VCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (441)
Q Consensus 180 aaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (441)
++||+||+|||+++|+++..+ .+++.++|+|+|++|+|+| +.+++..|+.||+|++|+||||+++|+.|.+.+++
T Consensus 794 aAGN~VV~KPseqTpl~a~~l----v~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~ 869 (1318)
T PRK11809 794 AAGNSVLAKPAEQTPLIAAQA----VRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAG 869 (1318)
T ss_pred HcCCeEEEeCCCCcHHHHHHH----HHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhh
Confidence 999999999999999999875 5668889999999999999 77899999999999999999999999999999887
Q ss_pred cC------CceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 259 RF------GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 259 ~~------~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++ +|+++|+||||++||++|||+|.|++.+++|+|.|+||+|++++++|||++++|+|++.|++.++++++|+|
T Consensus 870 ~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP 949 (1318)
T PRK11809 870 RLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNP 949 (1318)
T ss_pred hcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCc
Confidence 65 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC---CCCceEeeEEEEcCCCCCccccccccceEEEEEeC-
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQ- 408 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~- 408 (441)
.+.++++||+|++.+.+++.++|++++++|++++.||...+ ..|+|++|||+.+ +++.++++|+||||++|++|+
T Consensus 950 ~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~-~~~~~l~eEiFGPVL~V~~~~~ 1028 (1318)
T PRK11809 950 DRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL-DSFDELKREVFGPVLHVVRYNR 1028 (1318)
T ss_pred ccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec-cchhhhcCcccCceEEEEEeCC
Confidence 99999999999999999999999999999999999875422 4599999999964 567889999999999999996
Q ss_pred -CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 409 -TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 409 -~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++|+|+++|+++|||+++|||+|.++++++.
T Consensus 1029 ~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~ 1061 (1318)
T PRK11809 1029 NQLDELIEQINASGYGLTLGVHTRIDETIAQVT 1061 (1318)
T ss_pred CCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHH
Confidence 79999999999999999999999999998874
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-81 Score=638.09 Aligned_cols=380 Identities=22% Similarity=0.314 Sum_probs=350.4
Q ss_pred CCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHh
Q 013505 52 EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGL 130 (441)
Q Consensus 52 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 130 (441)
.+..+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||+.++. .|+..+++.++++++.
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999995 6999999999999987
Q ss_pred hhhhcCcc---ccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHH
Q 013505 131 SRQLNGSV---IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (441)
Q Consensus 131 ~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~ 207 (441)
.+...+.. .+....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++ ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~----~~ 157 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA----AN 157 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHH----HH
Confidence 77654331 121112345678899999999999999999999999999999999999999999999998764 45
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeC---CCCHHHH
Q 013505 208 FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD---DADIKLA 284 (441)
Q Consensus 208 l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~---dadl~~a 284 (441)
+.+ ++|+|++|+++|+.++++.|+.|+ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|
T Consensus 158 ~~~-~lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 158 IPK-YLDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred HHH-hCCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence 555 499999999999888999999995 99999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHh-cCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCC
Q 013505 285 VRSVLFAAVG-TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG 363 (441)
Q Consensus 285 a~~i~~~~~~-~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga 363 (441)
++.+++++|. |+||.|++++|+|||++++|+|+++|.++++++++|+|.++ +++||++++.++++++++|++++++ +
T Consensus 236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~ 313 (484)
T PLN02203 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-A 313 (484)
T ss_pred HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-C
Confidence 9999999996 89999999999999999999999999999999999999986 6899999999999999999999987 7
Q ss_pred EEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 364 KILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 364 ~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++++||.. +..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 314 ~~~~gg~~-~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~ 390 (484)
T PLN02203 314 SIVHGGSI-DEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRIL 390 (484)
T ss_pred eEEeCCCc-CCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 89999875 346999999999 79999999999999999999999999999999999999999999999999998874
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-80 Score=683.34 Aligned_cols=413 Identities=31% Similarity=0.468 Sum_probs=378.4
Q ss_pred HHHhccCCCCCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHH
Q 013505 10 FLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIG 88 (441)
Q Consensus 10 ~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 88 (441)
+++......-..+.+|+|+.. .+..++++||+| ++++++++.++.+++++|++.|++|++.|+.+|..+|.++|++++
T Consensus 544 al~~~~~~~~~~~~~i~g~~~-~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raA 622 (1208)
T PRK11905 544 ALNAFAAKTWHAAPLLAGGDV-DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAA 622 (1208)
T ss_pred HHHHHHccCeeecceeccccc-cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence 444444443344566777654 466799999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchH
Q 013505 89 DALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPC 168 (441)
Q Consensus 89 ~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 168 (441)
+.|++++++|+.++++|+||++.++..|+.+++++++||+...+...+. ..++|+|||++|+|||||+
T Consensus 623 dll~~~~~eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~~------------~~~~P~GVv~~IsPwNfPl 690 (1208)
T PRK11905 623 DLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLNG------------PGHKPLGPVVCISPWNFPL 690 (1208)
T ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC------------ceecCccEEEEEcCCcCHH
Confidence 9999999999999999999999999999999999999999877654311 2467999999999999999
Q ss_pred HhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChH
Q 013505 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTK 247 (441)
Q Consensus 169 ~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (441)
...++++++||++||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.
T Consensus 691 ai~~g~i~aALaaGN~VV~KPse~tpl~a~~l----~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~ 766 (1208)
T PRK11905 691 AIFTGQIAAALVAGNTVLAKPAEQTPLIAARA----VRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTE 766 (1208)
T ss_pred HHHHHHHHHHHHcCCEEEEeCCcccHHHHHHH----HHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHH
Confidence 99999999999999999999999999999875 5678899999999999999 777999999999999999999999
Q ss_pred HHHHHHHHhhcc---CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHH
Q 013505 248 VGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324 (441)
Q Consensus 248 ~g~~i~~~a~~~---~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 324 (441)
+|+.|.+.++++ .+|+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++||||++++|+|+++|++++
T Consensus 767 vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~ 846 (1208)
T PRK11905 767 VARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAM 846 (1208)
T ss_pred HHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHH
Confidence 999999998876 38999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC-CCCceEeeEEEEcCCCCCccccccccceEE
Q 013505 325 KQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIVEISPTADIVKEELFAPVLY 403 (441)
Q Consensus 325 ~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~ 403 (441)
+++++|||.+..+++||+|++.+.+++.++|+++.++|+.++.|+...+ ..|+|+.|||+.+ +++.++++|+||||++
T Consensus 847 ~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~-~~~~~~~eEiFGPVL~ 925 (1208)
T PRK11905 847 DELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI-DSISDLEREVFGPVLH 925 (1208)
T ss_pred HHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec-CChHHhcCCccCceEE
Confidence 9999999999999999999999999999999999999998887764322 4699999999975 5678899999999999
Q ss_pred EEEeC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 404 VMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 404 v~~~~--~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|+ +++|+|+++|+++|||+++|||+|.+.++++.
T Consensus 926 V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~ 964 (1208)
T PRK11905 926 VVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVT 964 (1208)
T ss_pred EEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHH
Confidence 99997 69999999999999999999999999998874
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-80 Score=631.00 Aligned_cols=375 Identities=29% Similarity=0.467 Sum_probs=350.4
Q ss_pred HHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcC
Q 013505 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136 (441)
Q Consensus 57 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~ 136 (441)
|+++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++++|+|||..+++.|+..+++.+++++...+...+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999988889999999999999988776544
Q ss_pred ccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCc
Q 013505 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216 (441)
Q Consensus 137 ~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~g 216 (441)
...+...++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l----~~~~~~aGlP~g 156 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLI----GRVFHEAGLPKG 156 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHH----HHHHHHcCcCCC
Confidence 4444322344567889999999999999999999999999999999999999999999999875 677889999999
Q ss_pred eEEEecCC----HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHH
Q 013505 217 IFTSFCGG----AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAA 292 (441)
Q Consensus 217 vv~~v~g~----~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~ 292 (441)
++|+++|+ .++++.|++||+|+.|+||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.+++++
T Consensus 157 v~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 157 VLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred cEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999972 35789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc
Q 013505 293 VGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372 (441)
Q Consensus 293 ~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~ 372 (441)
|.|+||.|++++|||||+++||+|+++|+++++++++| .+++||++++.+.+++.++|++++++|+++++||...
T Consensus 237 ~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred HhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 99999999999999999999999999999999999998 6899999999999999999999999999999999764
Q ss_pred C-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 373 E-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 373 ~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
. ..|+|++|||+ +++++|++++||+||||++|++|+|.+|||+++|+++|||++||||+|.++++++.
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~ 381 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVA 381 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 3 36899999999 89999999999999999999999999999999999999999999999999998874
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-80 Score=632.07 Aligned_cols=378 Identities=36% Similarity=0.622 Sum_probs=355.2
Q ss_pred HHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcC
Q 013505 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136 (441)
Q Consensus 57 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~ 136 (441)
|++++++.|++|++.|+++|..+|.++|+++++.|++++++|+++++.|+|||..++..|+..+++.+++++...++..+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999988776655
Q ss_pred ccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCc
Q 013505 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGA 216 (441)
Q Consensus 137 ~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~g 216 (441)
...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.. ++.+++.++|+|+|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~---~l~~~l~~aGlP~g 157 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGL---LIAEIFEEAGLPKG 157 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHH---HHHHHHHHcCCCcc
Confidence 444432234556788999999999999999999999999999999999999999999987432 25788999999999
Q ss_pred eEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhc
Q 013505 217 IFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (441)
Q Consensus 217 vv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 295 (441)
++|+++| +.+.++.|++|++++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 158 vv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 237 (431)
T cd07104 158 VLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLH 237 (431)
T ss_pred cEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 9999999 677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCC
Q 013505 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375 (441)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~ 375 (441)
+||.|++++|||||++++|+|+++|+++++.+++|+|.++.+.+||++++.+.+++.+++++++.+|+++++||.. +
T Consensus 238 ~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~ 314 (431)
T cd07104 238 QGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---E 314 (431)
T ss_pred CCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999864 5
Q ss_pred CceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 376 g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.++++++.
T Consensus 315 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 380 (431)
T cd07104 315 GLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFA 380 (431)
T ss_pred CceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 899999999 78999999999999999999999999999999999999999999999999998874
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-80 Score=630.38 Aligned_cols=377 Identities=23% Similarity=0.328 Sum_probs=347.2
Q ss_pred CCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhh
Q 013505 53 ASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLS 131 (441)
Q Consensus 53 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~ 131 (441)
.+.+|+++|+++|++|++.|+.++..+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++...
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999997 59999999999999887
Q ss_pred hhhcCc-cccCC---CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHH
Q 013505 132 RQLNGS-VIPSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (441)
Q Consensus 132 ~~~~~~-~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~ 207 (441)
+.+.+. ..... .++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+ .++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l----~~l 157 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALL----AEL 157 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHH----HHH
Confidence 765322 22111 1234567789999999999999999999999999999999999999999999999876 455
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHH
Q 013505 208 FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRS 287 (441)
Q Consensus 208 l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~ 287 (441)
+.+ |+|+|++|+++|+.+....|+.|| ++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.
T Consensus 158 ~~~-~lP~g~v~vv~g~~~~~~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 158 VPK-YLDPDAFQVVQGGVPETTALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred HHH-hCCcCEEEEEcCCchhHHHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 556 699999999998434445699999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEe
Q 013505 288 VLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367 (441)
Q Consensus 288 i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~ 367 (441)
+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+| ++++.+||++++.+.+++.++++++ |+++++
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~ 311 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVI 311 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEE
Confidence 999999999999999999999999999999999999999999999 8999999999999999999999987 889999
Q ss_pred cCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 368 GGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 368 gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||... ..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++.
T Consensus 312 gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~ 384 (436)
T cd07135 312 GGEMD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHIL 384 (436)
T ss_pred CCCcC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 99764 36899999999 89999999999999999999999999999999999999999999999999998874
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-80 Score=626.27 Aligned_cols=372 Identities=23% Similarity=0.336 Sum_probs=342.0
Q ss_pred HHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCcc
Q 013505 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSV 138 (441)
Q Consensus 60 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~ 138 (441)
+++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++.......+..
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999999986 599999999999998776643321
Q ss_pred ---ccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCC
Q 013505 139 ---IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (441)
Q Consensus 139 ---~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~ 215 (441)
.+........++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++ +++.+ ++|+
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~----~~~~~-~~P~ 157 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLA----KLIPE-YLDT 157 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHH----HHHHH-hCCc
Confidence 111112234567899999999999999999999999999999999999999999999998764 45555 4999
Q ss_pred ceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHH-h
Q 013505 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAV-G 294 (441)
Q Consensus 216 gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-~ 294 (441)
|++|+++|+.+.+..|++| .++.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .
T Consensus 158 gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 158 KAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred CeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 9999999977889999987 6999999999999999999999999999999999999999999999999999999999 5
Q ss_pred cCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCC
Q 013505 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374 (441)
Q Consensus 295 ~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~ 374 (441)
|+||.|++++|+|||++++|+|+++|.++++++++|+| ++.+++||++++.+++++.++|++++. |+++++||.. +.
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-~~ 313 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-DE 313 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-CC
Confidence 99999999999999999999999999999999999999 468999999999999999999999998 8999999975 33
Q ss_pred CCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 375 ~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.++++.
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~ 380 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIV 380 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH
Confidence 6999999999 78999999999999999999999999999999999999999999999999998874
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-80 Score=622.06 Aligned_cols=353 Identities=31% Similarity=0.546 Sum_probs=332.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcC
Q 013505 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (441)
Q Consensus 84 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 163 (441)
|+++++.|++|+++|++++++|+|||+.+++.|+..+++.+++++.+.+...+...+...++...+..++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999998877665443322234456788999999999999
Q ss_pred CCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEe
Q 013505 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSF 242 (441)
Q Consensus 164 ~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~f 242 (441)
||||+...++++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.+.++.|++|++++.|+|
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f 156 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAF----AKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM 156 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHH----HHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence 9999999999999999999999999999999999875 6677899999999999999 7888999999999999999
Q ss_pred eCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHH
Q 013505 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322 (441)
Q Consensus 243 tGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~ 322 (441)
|||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++
T Consensus 157 tGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~ 236 (409)
T PRK10090 157 TGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGE 236 (409)
T ss_pred ECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCCCCC-CCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccc
Q 013505 323 VYKQVKIGDPLEK-GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAP 400 (441)
Q Consensus 323 ~~~~~~~g~p~~~-~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgP 400 (441)
+++++++|+|+++ ++++||++++.++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+|||
T Consensus 237 ~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgP 316 (409)
T PRK10090 237 AMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGP 316 (409)
T ss_pred HHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCc
Confidence 9999999999998 8999999999999999999999999999999999875556899999999 8999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 401 v~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|++|+|++|||+++|+++|||+++|||+|.++++++.
T Consensus 317 vl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~ 356 (409)
T PRK10090 317 VLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAI 356 (409)
T ss_pred eEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999999999998875
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-79 Score=629.74 Aligned_cols=398 Identities=18% Similarity=0.276 Sum_probs=357.6
Q ss_pred CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChh
Q 013505 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (441)
Q Consensus 32 ~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (441)
++...+++||+|++.+++++.+ |++.+|++|++|++.|+++++.+|.++|.+++++|++++++|+++++.|+||++.
T Consensus 63 ~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~ 139 (549)
T cd07127 63 SGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFM 139 (549)
T ss_pred CCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHH
Confidence 5678999999999999899887 8999999999999999999999999999999999999999999999999999998
Q ss_pred hhhH-----HHHHHHHHHHHHHHhhhhhcCccc---cCCCCCc---eeEEEEeccceEEEEcCCCchHHhHHHHhhhhhc
Q 013505 112 EGIG-----EVQEVIDMCDFAVGLSRQLNGSVI---PSERPNH---MMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (441)
Q Consensus 112 ~a~~-----ev~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALa 180 (441)
++.. |++++++.++|+++....+.+... +...... .....++|+||+++|+|||||+++.+.++++||+
T Consensus 140 ~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALa 219 (549)
T cd07127 140 MAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLA 219 (549)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHh
Confidence 8752 799999999999888776544322 1111001 1123679999999999999999999999999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhc
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG--GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g--~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~ 258 (441)
+||+||+|||+.+|+++..+++++.++|.++|+|+|+||+|+| +.++++.|+.||+|+.|.||||+.+|+.|.+.++
T Consensus 220 aGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~- 298 (549)
T cd07127 220 TGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR- 298 (549)
T ss_pred cCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc-
Confidence 9999999999999999988888899999999999999999997 3688999999999999999999999999999987
Q ss_pred cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecc---------cHHHHHHHHHHHHHhhcc
Q 013505 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES---------IYQTVLDQLVDVYKQVKI 329 (441)
Q Consensus 259 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~ 329 (441)
.+++++|+|||||+||++|+|++.+++.+++|+|.|+||.|++++|+|||++ +||+|+++|+++++++ +
T Consensus 299 -~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~ 376 (549)
T cd07127 299 -QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-L 376 (549)
T ss_pred -cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-c
Confidence 4799999999999999999999999999999999999999999999999999 8999999999999999 9
Q ss_pred CCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC---CCC-ceEeeEEE-EcCCCCCccccccccceEEE
Q 013505 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEG-NFVQPTIV-EISPTADIVKEELFAPVLYV 404 (441)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~---~~g-~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v 404 (441)
|||.+..+++||++++.+.+++.+ +++.|+ +++||.... ..| +|++|||+ ..+++|++++||+||||++|
T Consensus 377 Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V 451 (549)
T cd07127 377 ADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFV 451 (549)
T ss_pred CCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEE
Confidence 999999999999999999999854 555665 778876532 134 46699999 67789999999999999999
Q ss_pred EEeCCHHHHHHHHhcCC--C-CcEEEEecCCHHHHHhhh
Q 013505 405 MKFQTFEEAVKINNSVP--Q-GLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 405 ~~~~~~~eai~~~n~~~--~-gl~asv~t~d~~~~~~~~ 440 (441)
++|+|.+|+|+++|++. | ||++||||+|.+.++++.
T Consensus 452 ~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~ 490 (549)
T cd07127 452 VATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQ 490 (549)
T ss_pred EEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHH
Confidence 99999999999999984 4 699999999999988764
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-80 Score=625.13 Aligned_cols=368 Identities=24% Similarity=0.361 Sum_probs=339.5
Q ss_pred HHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCc-
Q 013505 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGS- 137 (441)
Q Consensus 60 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~- 137 (441)
+.+++|++||+.|+.+|+.+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++...+.+.+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5688999999999999999999999999999999999999999999999999996 59999999999999887765433
Q ss_pred cccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCC
Q 013505 138 VIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (441)
Q Consensus 138 ~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~ 215 (441)
..+.. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+ .+++.++ +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l----~~~~~~a-lP~ 156 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVI----AKIIEET-FDE 156 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHH----HHHHHHh-CCC
Confidence 22211 1234567889999999999999999999999999999999999999999999999876 4556666 999
Q ss_pred ceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhc
Q 013505 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (441)
Q Consensus 216 gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 295 (441)
|++|+|+|+.+.+..|+.|+ |+.|.||||+++|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 157 gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 157 EYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred CEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 99999999777889999776 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCC
Q 013505 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375 (441)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~ 375 (441)
+||.|++++|||||+++||+|+++|+++++++++|+|.+ .+++||++++.+.++++++++++ ++++||.. +.+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~-~~~ 308 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNT-DRE 308 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCc-CCC
Confidence 999999999999999999999999999999999999997 89999999999999999998763 89999975 336
Q ss_pred CceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 376 g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|.+.+++++
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~ 374 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVL 374 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 899999999 79999999999999999999999999999999999999999999999999998875
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-78 Score=615.89 Aligned_cols=372 Identities=20% Similarity=0.282 Sum_probs=340.0
Q ss_pred HHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCC-hhhhh-HHHHHHHHHHHHHHHhhhhhcCcc
Q 013505 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKI-LPEGI-GEVQEVIDMCDFAVGLSRQLNGSV 138 (441)
Q Consensus 61 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~ 138 (441)
.+++|++||+.|+.+|+.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.+++++.......+..
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56764 699999999999998776543322
Q ss_pred c-cC--CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCC
Q 013505 139 I-PS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (441)
Q Consensus 139 ~-~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~ 215 (441)
. .. ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+ .+++.++ +|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l----~~l~~~a-lP~ 157 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALL----AELLAEY-FDE 157 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHH----HHHHHHh-CCc
Confidence 1 11 11233467889999999999999999999999999999999999999999999999875 5556665 999
Q ss_pred ceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhc
Q 013505 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (441)
Q Consensus 216 gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 295 (441)
|++|+++|+.++++.|+.|+ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|+|++.|++.+++++|.|
T Consensus 158 g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 158 DEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred CeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 99999999778899999776 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--
Q 013505 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-- 373 (441)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-- 373 (441)
+||.|++++|||||++++|+|+++|+++++++++|+ +.++++||++++.+++++.++|++++++|+++++||...+
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~ 314 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDF 314 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCC
Confidence 999999999999999999999999999999999886 4678999999999999999999999999999999997643
Q ss_pred CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 374 ~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
.+|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++.
T Consensus 315 ~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~ 382 (434)
T cd07133 315 AATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVL 382 (434)
T ss_pred CCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 36899999999 79999999999999999999999999999999999999999999999999998874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-78 Score=621.31 Aligned_cols=378 Identities=24% Similarity=0.349 Sum_probs=345.9
Q ss_pred CCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHh
Q 013505 52 EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGL 130 (441)
Q Consensus 52 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~ 130 (441)
..+.+|+++++++|++||+.|+.++.++|.++|+++++.|++|+++|+++++.|+|||..++. .|+..+++.++++++.
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 358899999999999999999999999999999999999999999999999999999999986 4999999999998887
Q ss_pred hhhhcCcc-ccC--CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHH
Q 013505 131 SRQLNGSV-IPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (441)
Q Consensus 131 ~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~ 207 (441)
.+.+.... ... .......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++ ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~----~l 158 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMA----KL 158 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHH----HH
Confidence 76653322 111 111234678899999999999999999999999999999999999999999999998764 45
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHH
Q 013505 208 FERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRS 287 (441)
Q Consensus 208 l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~ 287 (441)
+.++ +|+|++++++|+.+.+..|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.
T Consensus 159 l~~~-lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 159 LTKY-LDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred HHHh-CCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence 5554 99999999999888899999987 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEe
Q 013505 288 VLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367 (441)
Q Consensus 288 i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~ 367 (441)
+++++|.|+||.|+++++||||++++|+|++.|++.++++. |+|.++++++||+++..+.+++.+++++ +|+++++
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~~---~ga~~~~ 312 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVY 312 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHHh---CCCcEEE
Confidence 99999999999999999999999999999999999999986 6666788999999999999999999963 6899999
Q ss_pred cCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 368 GGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 368 gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||.. +..|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.+++++
T Consensus 313 gG~~-~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~ 385 (493)
T PTZ00381 313 GGEV-DIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVL 385 (493)
T ss_pred CCCc-CCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 9975 446889999999 89999999999999999999999999999999999999999999999999998875
|
|
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-78 Score=613.29 Aligned_cols=374 Identities=21% Similarity=0.342 Sum_probs=345.7
Q ss_pred HHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCc-
Q 013505 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGS- 137 (441)
Q Consensus 60 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~- 137 (441)
+++++|++||+.|+++|..+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++.......+.
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5789999999999999999999999999999999999999999999999999996 69999999999988765543322
Q ss_pred cccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCC
Q 013505 138 VIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (441)
Q Consensus 138 ~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~ 215 (441)
..+.. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+ .+++.++ +|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~----~~~~~~a-~p~ 156 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVI----AKIIREA-FDE 156 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHH----HHHHHHh-CCc
Confidence 12111 1244567899999999999999999999999999999999999999999999999765 5667777 999
Q ss_pred ceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhc
Q 013505 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (441)
Q Consensus 216 gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 295 (441)
|++|+++|+.+.+..|++|+ ++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 157 g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 157 DEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred CEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 99999999778899999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC-CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCC
Q 013505 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374 (441)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~ 374 (441)
+||.|++++|||||++++|+|+++|+++++.++.|+| .+.++++||++++.+++++.++|++++++|+++++||.. +.
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~-~~ 314 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQF-DA 314 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCc-CC
Confidence 9999999999999999999999999999999988887 888999999999999999999999999999999999976 34
Q ss_pred CCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 375 ~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+|++|||+ +++++|++++||+||||++|++|+|.+|+|+++|+++|||+++|||+|.+.+++++
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 381 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVL 381 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 5899999999 79999999999999999999999999999999999999999999999999998874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-78 Score=607.97 Aligned_cols=360 Identities=19% Similarity=0.216 Sum_probs=320.1
Q ss_pred HHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHH--HHHHHHhhhhhc
Q 013505 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDM--CDFAVGLSRQLN 135 (441)
Q Consensus 58 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~--~~~~~~~~~~~~ 135 (441)
+++|+++|++||+.|+++|+.+|.++|+++++.|++|+++|+++++.|+|||+.+++.++...... .++++. ...
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~---~~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKD---EKT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc---ccc
Confidence 478999999999999999999999999999999999999999999999999999998766544432 222221 112
Q ss_pred CccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCC
Q 013505 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (441)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~ 215 (441)
+..++.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+++.++|+|+
T Consensus 78 ~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLTGD-ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred CceecCC-CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 2222221 233457889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHh
Q 013505 216 AIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVG 294 (441)
Q Consensus 216 gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 294 (441)
|++|+|+| +.+.++.|+.||+|++|+||||+. +++.++++++|+++|+|||+|+||++|||++.|++.+++++|.
T Consensus 157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~ 232 (439)
T cd07081 157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTF 232 (439)
T ss_pred hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhc
Confidence 99999998 778999999999999999999998 5666778899999999999999999999999999999999999
Q ss_pred cCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCc-cc-
Q 013505 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS-VI- 372 (441)
Q Consensus 295 ~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~-~~- 372 (441)
|+||.|++.+|||||+++||+|+++|.+++ ||+++..+.+++.++|+++.++|++++.|+. ..
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~ 297 (439)
T cd07081 233 DNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIA 297 (439)
T ss_pred CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHH
Confidence 999999999999999999999999998863 8999999999999999999999998754432 11
Q ss_pred CCCCceEeeE---EE-EcC--CCCCccccccccceEEEEEeCCHHHHHHHHhcC----CCCcEEEEecCC---HHHHHhh
Q 013505 373 ESEGNFVQPT---IV-EIS--PTADIVKEELFAPVLYVMKFQTFEEAVKINNSV----PQGLSSSIFTRS---PENIFKW 439 (441)
Q Consensus 373 ~~~g~~~~Pt---vl-~~~--~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~----~~gl~asv~t~d---~~~~~~~ 439 (441)
...|+|++|| ++ +++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++
T Consensus 298 ~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~ 377 (439)
T cd07081 298 AAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQF 377 (439)
T ss_pred HHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHH
Confidence 1258899998 88 788 999999999999999999999999999999975 799999999999 9999887
Q ss_pred h
Q 013505 440 L 440 (441)
Q Consensus 440 ~ 440 (441)
+
T Consensus 378 a 378 (439)
T cd07081 378 A 378 (439)
T ss_pred H
Confidence 5
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-76 Score=604.30 Aligned_cols=368 Identities=23% Similarity=0.353 Sum_probs=335.3
Q ss_pred HHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCcc
Q 013505 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSV 138 (441)
Q Consensus 60 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~ 138 (441)
+++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++...+.+.+..
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5889999999999999999999999999999999999999999999999999996 699999999999988777654322
Q ss_pred ccCC---CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCC
Q 013505 139 IPSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (441)
Q Consensus 139 ~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~ 215 (441)
.... ......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++ +++.+ ++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~----~~~~~-~lp~ 156 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLA----ELIPK-YLDK 156 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHH----HHHHH-hCCc
Confidence 2111 11234678899999999999999999999999999999999999999999999998764 45555 4999
Q ss_pred ceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhc
Q 013505 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (441)
Q Consensus 216 gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 295 (441)
|++|+++|+.+.+..|+. ++|+.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 157 gv~~vv~g~~~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 157 ECYPVVLGGVEETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred CeEEEEeCCHHHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 999999996556677776 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCC
Q 013505 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375 (441)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~ 375 (441)
+||.|++++|||||++++|+|+++|.+++++++.|+| ++.+++||++++.+++++.+++++ +++++||.. +.+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~-~~~ 308 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQT-DEK 308 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCcc-CCC
Confidence 9999999999999999999999999999999999988 788999999999999999998863 489999975 336
Q ss_pred CceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 376 g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++.
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~ 374 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKIL 374 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH
Confidence 899999999 79999999999999999999999999999999999999999999999999998874
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-77 Score=559.82 Aligned_cols=409 Identities=21% Similarity=0.372 Sum_probs=383.2
Q ss_pred CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChh
Q 013505 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (441)
Q Consensus 32 ~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (441)
+.+++..+.|+||+.+++++..++.|+++.+..|++|++.|.+.+...|.++|+.+.+.+-+|.|.+++..++||||++.
T Consensus 62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv 141 (583)
T KOG2454|consen 62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV 141 (583)
T ss_pred CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence 55789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-hHHHHHHHHHHHHHHHhhhh-hcCccccCCCC--CceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEE
Q 013505 112 EG-IGEVQEVIDMCDFAVGLSRQ-LNGSVIPSERP--NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVW 187 (441)
Q Consensus 112 ~a-~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVl 187 (441)
+| .+|+--.++.+.|....-.+ +..+..|...- -+..++.++|+||++.|.|||||+.+++.++..||.+||.+|+
T Consensus 142 DAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVv 221 (583)
T KOG2454|consen 142 DASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVV 221 (583)
T ss_pred hhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEE
Confidence 88 57999999999987765443 33222221110 1234578999999999999999999999999999999999999
Q ss_pred ecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecC
Q 013505 188 KGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLEL 267 (441)
Q Consensus 188 kps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel 267 (441)
|.|+.+.++.....++|+.+|+..|-|+++|+++++-+++++.|.+|++++.+.|.||+.+++.|++.+++.++|+++||
T Consensus 222 K~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lEL 301 (583)
T KOG2454|consen 222 KVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLEL 301 (583)
T ss_pred EeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEee
Confidence 99999999999999999999999999999999999977899999999999999999999999999999999999999999
Q ss_pred CCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhH
Q 013505 268 SGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPES 347 (441)
Q Consensus 268 gG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~ 347 (441)
|||+++||++|+|++..+.-+++|.|..+||.|.+.+|++||+++||.|+..|.++++.++.|.|.....+||.+++..+
T Consensus 302 GGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nr 381 (583)
T KOG2454|consen 302 GGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNR 381 (583)
T ss_pred cCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCC
Q 013505 348 RKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQ 422 (441)
Q Consensus 348 ~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~ 422 (441)
.+.++.+|++|+++||+++.||.+.. ..|.|++||++ +++++|.|++||.|||+++|+++++.|++|+++|+++|
T Consensus 382 fdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~f 461 (583)
T KOG2454|consen 382 FDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRF 461 (583)
T ss_pred hHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcc
Confidence 99999999999999999999998643 46999999999 99999999999999999999999999999999999999
Q ss_pred CcEEEEecCCHHHHHhhh
Q 013505 423 GLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 423 gl~asv~t~d~~~~~~~~ 440 (441)
||++|||+.|..++.++.
T Consensus 462 gLG~sVFg~dk~~c~y~a 479 (583)
T KOG2454|consen 462 GLGCSVFGGDKHRCKYIA 479 (583)
T ss_pred cccceeccccHHHHHHHH
Confidence 999999999999998875
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-76 Score=602.48 Aligned_cols=372 Identities=23% Similarity=0.323 Sum_probs=338.0
Q ss_pred HHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhc--
Q 013505 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN-- 135 (441)
Q Consensus 58 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~-- 135 (441)
+++|+++|++|++.|+.+|..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.+++++...+...
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999988765422
Q ss_pred CccccCC------CCCceeEEEEeccceEEEEcCCCchHHh--HHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHH
Q 013505 136 GSVIPSE------RPNHMMLETWNPLGVVGVITAFNFPCAV--LGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (441)
Q Consensus 136 ~~~~~~~------~~~~~~~~~~~P~Gvv~~i~p~n~P~~~--~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~ 207 (441)
+...... .++...+..++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 2221111 1122346789999999999999999987 5589999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhc--cCCceeecCCCCCeEEEeCCC---CH
Q 013505 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ--RFGKCLLELSGNNAIIIMDDA---DI 281 (441)
Q Consensus 208 l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~--~~~~~~lelgG~~~~iV~~da---dl 281 (441)
|.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|+ |+
T Consensus 161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl 240 (454)
T cd07129 161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG 240 (454)
T ss_pred HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence 9999999999999999 66899999999999999999999999999999987 689999999999999999999 89
Q ss_pred HHHHHHHHHHHHhcCCCCccCcceEEEecc-cHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHH
Q 013505 282 KLAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360 (441)
Q Consensus 282 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~ 360 (441)
+.|++.+++|+|.|+||.|++++|||||++ ++|+|+++|.++++++++| |++++.+.+++.+.|+++++
T Consensus 241 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~~ 310 (454)
T cd07129 241 EAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALAA 310 (454)
T ss_pred HHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 9999999999999988654 67777888888899999999
Q ss_pred C-CCEEEecCcccCCCCceEeeEEEE-cC---CCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCC--H
Q 013505 361 Q-GGKILTGGSVIESEGNFVQPTIVE-IS---PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS--P 433 (441)
Q Consensus 361 ~-Ga~v~~gg~~~~~~g~~~~Ptvl~-~~---~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d--~ 433 (441)
+ |+++++||... .+|+|++|||+. .+ ++|++++||+||||++|++|+|.+|+|+++|+++|||++||||+| .
T Consensus 311 ~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~ 389 (454)
T cd07129 311 APGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDL 389 (454)
T ss_pred cCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchH
Confidence 8 99999999753 468999999994 44 689999999999999999999999999999999999999999999 7
Q ss_pred HHHHhhh
Q 013505 434 ENIFKWL 440 (441)
Q Consensus 434 ~~~~~~~ 440 (441)
+.+++++
T Consensus 390 ~~a~~~~ 396 (454)
T cd07129 390 ALARELL 396 (454)
T ss_pred HHHHHHH
Confidence 8877764
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-75 Score=595.29 Aligned_cols=368 Identities=23% Similarity=0.371 Sum_probs=335.9
Q ss_pred HHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCcc
Q 013505 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSV 138 (441)
Q Consensus 60 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~ 138 (441)
+++++|++||+.|+.+|+.+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++...+...+..
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999987775 599999999999988776553321
Q ss_pred -ccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCC
Q 013505 139 -IPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (441)
Q Consensus 139 -~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~ 215 (441)
.... ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+ .++|.+ |+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l----~~~~~~-~~P~ 156 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALL----AKLIPK-YFDP 156 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHH----HHHHHH-hCCC
Confidence 1111 1233567789999999999999999999999999999999999999999999999876 455666 6999
Q ss_pred ceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhc
Q 013505 216 AIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295 (441)
Q Consensus 216 gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 295 (441)
|++|+++|+.+.+..|+.|| ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 157 gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 157 EAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred CEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 99999999667799999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCC
Q 013505 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375 (441)
Q Consensus 296 ~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~ 375 (441)
+||.|++++|||||++++|+|+++|.+++++++.|+| ++.+++||++++.+.+++.++++++ ++++||.. +.+
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~-~~~ 308 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQV-DKE 308 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCcc-CCC
Confidence 9999999999999999999999999999999987766 4688999999999999999999865 79999875 336
Q ss_pred CceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 376 g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|++|||+ +++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++.
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~ 374 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVL 374 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 899999999 78999999999999999999999999999999999999999999999999998875
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-76 Score=596.13 Aligned_cols=360 Identities=20% Similarity=0.279 Sum_probs=320.8
Q ss_pred HHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhh
Q 013505 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQL 134 (441)
Q Consensus 55 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~ 134 (441)
.+|+++++++|++||+.|+++|..+|.++|+++++.|+++.++|++++++|+|||..++. ++.+++++......
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~~~~ 76 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKTPGT 76 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhcCcc
Confidence 478999999999999999999999999999999999999999999999999999987763 34456554422111
Q ss_pred cCccccC--CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcC
Q 013505 135 NGSVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212 (441)
Q Consensus 135 ~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~ag 212 (441)
. ...+. ..++...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++|.++|
T Consensus 77 ~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aG 155 (429)
T cd07121 77 E-DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAG 155 (429)
T ss_pred c-ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcC
Confidence 0 00010 11223457788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHH
Q 013505 213 LPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFA 291 (441)
Q Consensus 213 lP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~ 291 (441)
+|+|++|+|+| +.+.++.|++||+|++|+||||+.+|+.|++. .+|+++|+|||||+||++|||+++|++.++++
T Consensus 156 lP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~ 231 (429)
T cd07121 156 GPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQG 231 (429)
T ss_pred CCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHhc
Confidence 99999999998 77889999999999999999999999999875 49999999999999999999999999999999
Q ss_pred HHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHC--CCEEEecC
Q 013505 292 AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQ--GGKILTGG 369 (441)
Q Consensus 292 ~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~--Ga~v~~gg 369 (441)
+|+|+||.|++++|||||+++||+|+++|+++ + .++++..+.+++.++++++.+. |+++++||
T Consensus 232 ~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg 296 (429)
T cd07121 232 ASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGK 296 (429)
T ss_pred ccccCCCCCCccceEEEeHHHHHHHHHHHHHC------C---------CEEcCHHHHHHHHHhhcccCCCccccccccCc
Confidence 99999999999999999999999999999886 1 1478899999999999999864 78999998
Q ss_pred ccc---CCCCceEe---eEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCc--EEEEecCCHHHHHhhh
Q 013505 370 SVI---ESEGNFVQ---PTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL--SSSIFTRSPENIFKWL 440 (441)
Q Consensus 370 ~~~---~~~g~~~~---Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl--~asv~t~d~~~~~~~~ 440 (441)
... +..|+|++ |||+ +++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+++++|+
T Consensus 297 ~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a 376 (429)
T cd07121 297 DASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMA 376 (429)
T ss_pred CHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHH
Confidence 641 22477877 5999 8999999999999999999999999999999999999999 9999999999999875
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-76 Score=540.67 Aligned_cols=439 Identities=62% Similarity=1.057 Sum_probs=427.6
Q ss_pred CcchhhHHHHHhccCCCCCCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHH
Q 013505 2 EFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81 (441)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~ 81 (441)
-..+++|.+|+++....++...|. |+|..++.....++|++.++|+.+..++.+|.+.+++.|++|++.|.+.|...|.
T Consensus 2 lin~~~y~flkelglte~n~gvy~-gkw~a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrg 80 (507)
T KOG2453|consen 2 LINDSKYGFLKELGLTENNAGVYH-GKWAASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRG 80 (507)
T ss_pred CcccchhHHHHHhCCcccccceee-eeeccCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 356889999999999999999885 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEE
Q 013505 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVI 161 (441)
Q Consensus 82 ~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 161 (441)
++.+++.|.|+...+.|.+++++|+||...+..+|+.+.+|.|+|...+.+.+.+..+|++++++..+..|.|+|+|++|
T Consensus 81 eivrqigdalr~klq~lg~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvi 160 (507)
T KOG2453|consen 81 EIVRQIGDALRTKLQNLGKLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVI 160 (507)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred cCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEE
Q 013505 162 TAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVS 241 (441)
Q Consensus 162 ~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ 241 (441)
+.+|||....-|.-+.++.+||+|++||++.+|+++...-++|.+.|.+--+|++.....+|+.+.+.++..+.+++.+.
T Consensus 161 tafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvs 240 (507)
T KOG2453|consen 161 TAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVS 240 (507)
T ss_pred EeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHH
Q 013505 242 FTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321 (441)
Q Consensus 242 ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~ 321 (441)
||||+.+++.+.+..-.+.++..|||||+|++||.+|||+..++...++++...+||+|+...|++||+++||+++++|+
T Consensus 241 ftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlk 320 (507)
T KOG2453|consen 241 FTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLK 320 (507)
T ss_pred cccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHH
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccce
Q 013505 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPV 401 (441)
Q Consensus 322 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv 401 (441)
+..+++++|+|+|+.+.+|||.++.+..+++..|++++++|+++++||+..+.+|+|++|||+.+..|.+++.+|.|.||
T Consensus 321 kayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapi 400 (507)
T KOG2453|consen 321 KAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPI 400 (507)
T ss_pred HHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhhC
Q 013505 402 LYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG 441 (441)
Q Consensus 402 ~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~~ 441 (441)
++|.+|++++||+.+-|+.+.||+.||||+|..++.++.|
T Consensus 401 lyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~g 440 (507)
T KOG2453|consen 401 LYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMG 440 (507)
T ss_pred eeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhC
Confidence 9999999999999999999999999999999999999987
|
|
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-74 Score=586.07 Aligned_cols=366 Identities=21% Similarity=0.261 Sum_probs=329.5
Q ss_pred HHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhc--C
Q 013505 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN--G 136 (441)
Q Consensus 59 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~--~ 136 (441)
++|+++|++|++.|+++|+.+|.++|+++++.|++++++|++++++|+|||+ ++..|+...++.+++++...+... +
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 6799999999999999999999999999999999999999999999999999 777899999999999988776532 1
Q ss_pred ccccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCC-
Q 013505 137 SVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL- 213 (441)
Q Consensus 137 ~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~agl- 213 (441)
...... ......+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+ .+++.++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l----~~~l~~ag~~ 156 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIM----VRLLHYAGLL 156 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHH----HHHHHHhCCC
Confidence 111111 1123467789999999999999999999999999999999999999999999999875 566788898
Q ss_pred CCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCC-CHHHHHHHHHHHH
Q 013505 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDA-DIKLAVRSVLFAA 292 (441)
Q Consensus 214 P~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~da-dl~~aa~~i~~~~ 292 (441)
|+|++|+++|+.+.+..|+.||+++.|+||||+++|+.|++.++. +|+++|+|||||+||++|| |++.+++.+++++
T Consensus 157 P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~ 234 (442)
T cd07084 157 PPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDM 234 (442)
T ss_pred CccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHH
Confidence 999999999944489999999999999999999999999998874 8999999999999999999 6999999999999
Q ss_pred HhcCCCCccCcceEEEecc-cHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHC-CCEEEecCc
Q 013505 293 VGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQ-GGKILTGGS 370 (441)
Q Consensus 293 ~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~-Ga~v~~gg~ 370 (441)
|.|+||.|++++|||||++ ++|+|+++|.++++++++| ++++||+++. ++.++|++++++ |+++++||.
T Consensus 235 ~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~ 305 (442)
T cd07084 235 TACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGK 305 (442)
T ss_pred hcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCc
Confidence 9999999999999999999 9999999999999999999 6889998765 566667778888 489999997
Q ss_pred ccC------CCCceEeeEEE-EcCCCC---CccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHh
Q 013505 371 VIE------SEGNFVQPTIV-EISPTA---DIVKEELFAPVLYVMKFQT--FEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (441)
Q Consensus 371 ~~~------~~g~~~~Ptvl-~~~~~~---~i~~eE~fgPv~~v~~~~~--~~eai~~~n~~~~gl~asv~t~d~~~~~~ 438 (441)
..+ ..|+|++|||+ +++++| ++++||+||||++|++|+| ++|+|+++|+++|||++||||+|.+.+++
T Consensus 306 ~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~ 385 (442)
T cd07084 306 ELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQE 385 (442)
T ss_pred ccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHH
Confidence 522 24899999999 788887 9999999999999999999 99999999999999999999999999988
Q ss_pred hh
Q 013505 439 WL 440 (441)
Q Consensus 439 ~~ 440 (441)
+.
T Consensus 386 ~~ 387 (442)
T cd07084 386 LI 387 (442)
T ss_pred HH
Confidence 74
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-74 Score=587.44 Aligned_cols=361 Identities=21% Similarity=0.286 Sum_probs=319.7
Q ss_pred CCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhh
Q 013505 53 ASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSR 132 (441)
Q Consensus 53 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~ 132 (441)
...+|+++++++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+|||+.+++. +.+++++....
T Consensus 33 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~~ 106 (465)
T PRK15398 33 GVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKTP 106 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHhc
Confidence 478899999999999999999999999999999999999999999999999999999988753 23444443321
Q ss_pred h---hcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHH
Q 013505 133 Q---LNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFE 209 (441)
Q Consensus 133 ~---~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~ 209 (441)
. ...... ..++...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++|.
T Consensus 107 ~~~~~~~~~~--~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~ 184 (465)
T PRK15398 107 GVEDLTTEAL--TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIV 184 (465)
T ss_pred cccccccCcc--cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence 1 111111 11234457788999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHH
Q 013505 210 RNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSV 288 (441)
Q Consensus 210 ~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i 288 (441)
++|+|+|++|+++| +.+.++.|++||+|++|+||||+.+|+.|++ ..+|+++|+|||||+||++|||++.|++.+
T Consensus 185 eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~i 260 (465)
T PRK15398 185 AAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARDI 260 (465)
T ss_pred HcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHHH
Confidence 99999999999998 7788999999999999999999999999998 358999999999999999999999999999
Q ss_pred HHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEec
Q 013505 289 LFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368 (441)
Q Consensus 289 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~g 368 (441)
++|+|.|+||.|++++|||||+++||+|+++|+++ + +|++++.+.+++.++++++.+++++++.|
T Consensus 261 ~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~------~---------~~li~~~~~~~v~~~l~~~~~~~~~~~~g 325 (465)
T PRK15398 261 VKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN------G---------AVLLTAEQAEKLQKVVLKNGGTVNKKWVG 325 (465)
T ss_pred HHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc------C---------CccCCHHHHHHHHHHHhhcccccchhhhC
Confidence 99999999999999999999999999999999876 1 27899999999999999655456677777
Q ss_pred Ccc--c-CCCCceE---eeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCc--EEEEecCCHHHHHhh
Q 013505 369 GSV--I-ESEGNFV---QPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL--SSSIFTRSPENIFKW 439 (441)
Q Consensus 369 g~~--~-~~~g~~~---~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl--~asv~t~d~~~~~~~ 439 (441)
|.. . +..|+|+ +|||+ +++++|++++||+||||++|++|+|++|||+++|+++||| ++||||+|.+++++|
T Consensus 326 ~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~ 405 (465)
T PRK15398 326 KDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKM 405 (465)
T ss_pred CCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHH
Confidence 643 1 2246666 47899 8999999999999999999999999999999999999998 999999999999987
Q ss_pred h
Q 013505 440 L 440 (441)
Q Consensus 440 ~ 440 (441)
+
T Consensus 406 a 406 (465)
T PRK15398 406 A 406 (465)
T ss_pred H
Confidence 5
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-74 Score=581.93 Aligned_cols=361 Identities=18% Similarity=0.253 Sum_probs=324.9
Q ss_pred HHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-HHHHHHH-HHHHHHHhhhhhc
Q 013505 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVID-MCDFAVGLSRQLN 135 (441)
Q Consensus 58 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~-~~~~~~~~~~~~~ 135 (441)
++.|+++|++||+.|+++|..+|.++|+++++.|++++++|++++++|+|||+.+++. ++...++ .+++++.. ...
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4789999999999999999999999999999999999999999999999999999986 7777777 77877752 222
Q ss_pred CccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCC
Q 013505 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (441)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~ 215 (441)
+.... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|.++|+|+
T Consensus 79 g~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GVIEE--DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred eeecc--CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 22111 1234567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHh
Q 013505 216 AIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVG 294 (441)
Q Consensus 216 gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~ 294 (441)
|++|+++| +.++++.|++||+|++|+||||+++++ .++++++|+++|+|||||+||++|||++.|++.+++|+|.
T Consensus 157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~ 232 (436)
T cd07122 157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTF 232 (436)
T ss_pred hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhc
Confidence 99999998 788999999999999999999999764 4566789999999999999999999999999999999999
Q ss_pred cCCCCccCcceEEEecccHHHHHHHHHHHHHhh-------ccCCC-CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEE
Q 013505 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQV-------KIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (441)
Q Consensus 295 ~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~-------~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~ 366 (441)
|+||.|++++|||||+++||+|+++|+++...+ ++|++ .+.++.+||+++..+++++..++..+...|++++
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl 312 (436)
T cd07122 233 DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVL 312 (436)
T ss_pred cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEE
Confidence 999999999999999999999999999998877 89998 4677889999999999999888887777888887
Q ss_pred ecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcC----CCCcEEEEecCCHHHHHhhh
Q 013505 367 TGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV----PQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 367 ~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~----~~gl~asv~t~d~~~~~~~~ 440 (441)
.++. -+++++|+++ +|.||||++|++|+|++|||+++|++ +|||++||||+|.++++++.
T Consensus 313 ~~~~-------------~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~ 376 (436)
T cd07122 313 VAEE-------------TGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFA 376 (436)
T ss_pred EEec-------------CCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHH
Confidence 6652 1567889987 56799999999999999999999997 89999999999999999874
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-72 Score=577.81 Aligned_cols=368 Identities=17% Similarity=0.184 Sum_probs=329.6
Q ss_pred CCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHh
Q 013505 52 EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGL 130 (441)
Q Consensus 52 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~ 130 (441)
..+.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|+++++.|+|||..+.+. +.....+.+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 4678999999999999999999999999999999999999999999999999999999888654 222344445444432
Q ss_pred hhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHh
Q 013505 131 SRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER 210 (441)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~ 210 (441)
.+.. +. +. ..++...+..++|+|||++|+|||||+.+..+++++||++||+||+|||+.+|.++..++++|.+++.+
T Consensus 84 ~~~~-G~-~~-~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 MKTI-GI-LS-EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred Cccc-ce-ec-CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 2222 22 11 122345677899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHH
Q 013505 211 NKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVL 289 (441)
Q Consensus 211 aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~ 289 (441)
+|+|+|++|+|+| +.+.++.|++||+|++|+||||+.+++.+ +.+.+|+++|+|||+|+||++|||+++|++.++
T Consensus 161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv 236 (488)
T TIGR02518 161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----YSSGTPAIGVGPGNGPAYIERTANVKKAVRDII 236 (488)
T ss_pred cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence 9999999999998 88999999999999999999999976554 445799999999999999999999999999999
Q ss_pred HHHHhcCCCCccCcceEEEecccHHHHHHHHHHH-------HHhhccCCC-CCCCCccCCCCChhHHHHHHHHHHHHHHC
Q 013505 290 FAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV-------YKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKSQ 361 (441)
Q Consensus 290 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~-------~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ 361 (441)
+|+|+|+||.|++.+|||||+++||+|+++|+++ .+.+++|+| +++.+++||+++..+++++.+++++++.+
T Consensus 237 ~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~ 316 (488)
T TIGR02518 237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE 316 (488)
T ss_pred HHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC
Confidence 9999999999999999999999999999999998 889999996 67889999999999999999999999999
Q ss_pred CCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhc----CCCCcEEEEecCCHHHHH
Q 013505 362 GGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS----VPQGLSSSIFTRSPENIF 437 (441)
Q Consensus 362 Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~----~~~gl~asv~t~d~~~~~ 437 (441)
|+++++||.. .+++++++ .+|.||||++|++|+|++|||+++|+ ++|||+++|||+|.++++
T Consensus 317 gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~ 382 (488)
T TIGR02518 317 DAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVR 382 (488)
T ss_pred CCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHH
Confidence 9999999853 24667776 79999999999999999999999887 689999999999999999
Q ss_pred hhh
Q 013505 438 KWL 440 (441)
Q Consensus 438 ~~~ 440 (441)
+|.
T Consensus 383 ~f~ 385 (488)
T TIGR02518 383 EFA 385 (488)
T ss_pred HHH
Confidence 985
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-72 Score=571.32 Aligned_cols=378 Identities=38% Similarity=0.695 Sum_probs=352.9
Q ss_pred HHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCcc
Q 013505 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSV 138 (441)
Q Consensus 59 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~ 138 (441)
+++++.|++|++.|+.++.++|.++|+++++.|.+++++++++++.|+||+..+++.|+..+++.+++++...+.+.+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999988877765443
Q ss_pred ccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceE
Q 013505 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIF 218 (441)
Q Consensus 139 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv 218 (441)
......+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..+ .++|.++|+|+|++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l----~~~l~~ag~p~~~~ 156 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLL----AELLAEAGLPPGVL 156 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHHcCCCcCcE
Confidence 22222345567789999999999999999999999999999999999999999999999876 56688899999999
Q ss_pred EEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCC
Q 013505 219 TSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAG 297 (441)
Q Consensus 219 ~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~G 297 (441)
++++| +.+.+..|+.|++++.|.||||..+++.|.+.++++++|+++|+||||++||++|+|++.|++.+++++|.++|
T Consensus 157 ~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~G 236 (432)
T cd07078 157 NVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAG 236 (432)
T ss_pred EEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccC
Confidence 99999 55588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCC-CC
Q 013505 298 QRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EG 376 (441)
Q Consensus 298 q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~-~g 376 (441)
|.|+++++||||++++++|+++|.++++++++|+|+++++++||++++.+.+++.++++++.++|+++++||...+. .|
T Consensus 237 q~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g 316 (432)
T cd07078 237 QVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKG 316 (432)
T ss_pred CCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976433 58
Q ss_pred ceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 377 ~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|||+ +++++++++++|+||||++|++|+|++|||+++|+.+|||+++|||+|.+.++++.
T Consensus 317 ~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~ 381 (432)
T cd07078 317 YFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVA 381 (432)
T ss_pred cEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 99999999 78999999999999999999999999999999999999999999999999998875
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-70 Score=531.12 Aligned_cols=402 Identities=31% Similarity=0.506 Sum_probs=365.0
Q ss_pred CceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 22 GCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 22 ~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
.-.++|+....++..+++||++ ..+++++..++.+|+++|++.|..|++.|..+|+.+|+.+|++++++|+.+..+|..
T Consensus 115 ~p~~~~~~~~~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~ 194 (769)
T COG4230 115 APIVNGAPVAGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMG 194 (769)
T ss_pred ccccCCCcCCCCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467787777888999999998 568899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhc
Q 013505 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALa 180 (441)
++++|-||++..+..|+.+++|+|+||+...+...+. ....|+|+|++|+|||||+..+..+++.||+
T Consensus 195 L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~ 262 (769)
T COG4230 195 LLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALA 262 (769)
T ss_pred HHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cccCCCCcEEEECCCCchHHHHHhHHHHHHH
Confidence 9999999999999999999999999999887652221 2367999999999999999999999999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (441)
+||+|+-||.++||+.+..- .+++.++|+|++++|+++| |..+|..|+.++++++|+||||+++++.|.++.+.+
T Consensus 263 aGN~VlAKPAEqTpLIAa~a----V~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r 338 (769)
T COG4230 263 AGNSVLAKPAEQTPLIAAQA----VRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKR 338 (769)
T ss_pred cCCccccCccccccHHHHHH----HHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhc
Confidence 99999999999999999765 4568899999999999999 888999999999999999999999999999998863
Q ss_pred ---CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 260 ---FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 260 ---~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
..|++.|.||.|.+||+.+|--+.++..++.|+|..+||+|++...+++++++.|..++.|+-.+..+++|+|..-.
T Consensus 339 ~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~ 418 (769)
T COG4230 339 QGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLT 418 (769)
T ss_pred CCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCcccee
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC-CCCceEeeEEEEcCCCCCccccccccceEEEEEeC--CHHHH
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQ--TFEEA 413 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~--~~~ea 413 (441)
+++||+|+....+.++++|+..+..|-.+..-....+ ..|.|+.||+++++.-.. ++.|+||||+.|++|+ ++++.
T Consensus 419 tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~e-L~rEVFGPVLHVvRy~~~~l~~v 497 (769)
T COG4230 419 TDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDE-LQREVFGPVLHVVRYKRDELDEV 497 (769)
T ss_pred ccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHH-HHHHhccceeEEEEecHHHHHHH
Confidence 9999999999999999999998887744332222111 379999999998775444 4789999999999995 58999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+.+|.++|||+.+|+|+-.+.+.++.
T Consensus 498 i~~INatGyGLT~GvHtRideti~~v~ 524 (769)
T COG4230 498 IDQINATGYGLTLGVHTRIDETIAHVT 524 (769)
T ss_pred HHHHhccCcceeeeeecchHHHHHHHH
Confidence 999999999999999999999887763
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-69 Score=510.29 Aligned_cols=426 Identities=27% Similarity=0.417 Sum_probs=384.0
Q ss_pred HHHHhccCCCCCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHH
Q 013505 9 EFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQI 87 (441)
Q Consensus 9 ~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 87 (441)
.+++++...+..+|+.|||+.+.+.......+|++ +.+++.+..++.+++++||++|.+|++.|..+|..+|.+|+.|.
T Consensus 48 ~A~~~~~~~~~evP~vIg~~~v~t~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkA 127 (561)
T KOG2455|consen 48 KALKELQKRPLEVPLVIGDKEVYTNDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKA 127 (561)
T ss_pred HHHHHHhcCceeccEEECCeeeecCCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHH
Confidence 36777888888999999999999888899999998 56789999999999999999999999999999999999999999
Q ss_pred HHHHH-hhHHHHHHHHHHHhCCChhhhhHH-HHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEecc-ceEEEEcCC
Q 013505 88 GDALR-EKLHHLGRLLSIEMGKILPEGIGE-VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPL-GVVGVITAF 164 (441)
Q Consensus 88 a~~l~-~~~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-Gvv~~i~p~ 164 (441)
|++++ +++-+|....+.-.||+..+|+-+ ..++++++|+.+..+..+.........++.....+++|+ |.|++|+||
T Consensus 128 Adlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPF 207 (561)
T KOG2455|consen 128 ADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPF 207 (561)
T ss_pred HHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEeccc
Confidence 99998 677888888889999999999754 889999999999888887765544434455555567787 999999999
Q ss_pred CchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEee
Q 013505 165 NFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFT 243 (441)
Q Consensus 165 n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ft 243 (441)
||-....-...+||| +||+|++|||..+.++.+. |.++|+|||+|+|++|+|++ ++..++.+..+|...++.||
T Consensus 208 nftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYi----i~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnft 282 (561)
T KOG2455|consen 208 NFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYI----IYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFT 282 (561)
T ss_pred ceeeeccccccChhh-hcceeeecccchhHHHHHH----HHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeee
Confidence 997655444445555 6999999999999999986 47889999999999999999 89999999999999999999
Q ss_pred CChHHHHHHHHHhhcc------CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHH
Q 013505 244 GSTKVGLMVQQTVHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317 (441)
Q Consensus 244 Gs~~~g~~i~~~a~~~------~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~ 317 (441)
||+.+-+.+.++.+++ ..+++.|+||||.-+|+++||++.++...++++|.++||.|++.+|.||+++.++.+.
T Consensus 283 gS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~ 362 (561)
T KOG2455|consen 283 GSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIR 362 (561)
T ss_pred cccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHH
Confidence 9999999999987764 4588999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCC-CCCCCccCCCCChhHHHHHHHHHHHHHHC-CCEEEecCcccCCCCceEeeEEE-EcCCCCCccc
Q 013505 318 DQLVDVYKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKSQ-GGKILTGGSVIESEGNFVQPTIV-EISPTADIVK 394 (441)
Q Consensus 318 ~~l~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~ 394 (441)
+.|.+.-+++++||| .|.++++||+|+....++++++++.|+.. ..++++||+++++.|+|++|||+ .-+|.++++.
T Consensus 363 e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ 442 (561)
T KOG2455|consen 363 EELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMT 442 (561)
T ss_pred HHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhh
Confidence 999999999999998 78899999999999999999999999864 37899999999999999999999 6789999999
Q ss_pred cccccceEEEEEeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHhh
Q 013505 395 EELFAPVLYVMKFQT--FEEAVKIN-NSVPQGLSSSIFTRSPENIFKW 439 (441)
Q Consensus 395 eE~fgPv~~v~~~~~--~~eai~~~-n~~~~gl~asv~t~d~~~~~~~ 439 (441)
||+||||++|+.|+| ++|+++++ |.++|||+++||++|.+.+++.
T Consensus 443 ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a 490 (561)
T KOG2455|consen 443 EEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHA 490 (561)
T ss_pred hhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHH
Confidence 999999999999977 78999987 7789999999999999987653
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-69 Score=543.20 Aligned_cols=338 Identities=20% Similarity=0.272 Sum_probs=296.6
Q ss_pred HHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh----hhhh--------HHHHHHHH
Q 013505 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVID 122 (441)
Q Consensus 55 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 122 (441)
.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++|+++++.|+||+. .++. .|+..+++
T Consensus 3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999998887764 3443 58889999
Q ss_pred HHHHHHHhhhhhcCccccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHH
Q 013505 123 MCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200 (441)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l 200 (441)
.+++++.+.+.. +...+.. ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+
T Consensus 83 ~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l 159 (417)
T PRK00197 83 GLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL 159 (417)
T ss_pred HHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence 999998766543 3333221 12335678899999999999986 4 67888999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEecC-C-HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCC
Q 013505 201 TKLVSEVFERNKLPGAIFTSFCG-G-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (441)
Q Consensus 201 ~~li~~~l~~aglP~gvv~~v~g-~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~d 278 (441)
++++.++|.++|+|+|++|+|+| + .+.++.|..||+|++|+||||+.+|+.|++.+ ++|+++|||||||+||++|
T Consensus 160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~d 236 (417)
T PRK00197 160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDES 236 (417)
T ss_pred HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCC
Confidence 99999999999999999999996 5 45788899999999999999999999999865 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHH
Q 013505 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (441)
Q Consensus 279 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (441)
||++.|++.+++|+|.|+| .|++++|+|||+++||+|+++|++++++++++
T Consensus 237 Adl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 287 (417)
T PRK00197 237 ADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE---------------------------- 287 (417)
T ss_pred CCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999887532
Q ss_pred HHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHh
Q 013505 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (441)
Q Consensus 359 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~ 438 (441)
++ ||... .+ |+ |||+ +++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++
T Consensus 288 ------~~-~~~~~--~~-~~-PTi~--~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~ 354 (417)
T PRK00197 288 ------LR-GDEAA--LA-LL-PDVV--PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAER 354 (417)
T ss_pred ------Ee-cCHHH--HH-hh-cccc--cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence 22 11110 12 33 9998 5679999999999999999999999999999999999999999999999998
Q ss_pred hh
Q 013505 439 WL 440 (441)
Q Consensus 439 ~~ 440 (441)
|+
T Consensus 355 ~~ 356 (417)
T PRK00197 355 FL 356 (417)
T ss_pred HH
Confidence 74
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-69 Score=517.56 Aligned_cols=394 Identities=26% Similarity=0.502 Sum_probs=363.0
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
+.+||+|+++. .+++++.+||.||++|++++.++..|+++|+++|+.||+ .|+++|.++|.+.|.++++++++|++
T Consensus 422 h~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~e 501 (881)
T KOG2452|consen 422 HQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQE 501 (881)
T ss_pred HhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccc
Confidence 45799999986 578999999999999999999999999999999999997 49999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCC--CCC-ceeEEEEeccceEEEEcCCCchHHhHH
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSE--RPN-HMMLETWNPLGVVGVITAFNFPCAVLG 172 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 172 (441)
+|+.+.+++.|.-+.-|. ..+--.++.+||++++.+++.+..+|.. +|+ +.++++++|+|||++|+|||||+..+.
T Consensus 502 elat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmls 581 (881)
T KOG2452|consen 502 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLS 581 (881)
T ss_pred hhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHH
Confidence 999999999997766663 3566678999999999999999887753 444 457889999999999999999999999
Q ss_pred HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHH
Q 013505 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (441)
Q Consensus 173 ~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (441)
|+.+.+|++- -..+ .+ + .|++|+++| ++-+|+.|..||+|+.|-||||+++|+.
T Consensus 582 wk~aaclaa~--------------~~k~----~e------~-sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~ 636 (881)
T KOG2452|consen 582 WKTAACLAAQ--------------VLKF----AE------L-TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 636 (881)
T ss_pred HHHHHHHHHH--------------Hhhh----hh------h-cceEEEecCCcchhccccccCCccceeccccchHHHHH
Confidence 9999888742 1111 11 1 589999999 8889999999999999999999999999
Q ss_pred HHHHhh-ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 252 VQQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 252 i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
|++.++ .+.|++.|||||++|+||+.|||+++|++.-..+.|++-|..|.+..|+||.+++.|+|+.++++.++++++|
T Consensus 637 im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig 716 (881)
T KOG2452|consen 637 IMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVG 716 (881)
T ss_pred HHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccC
Confidence 999987 4668999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+|+|.+++-||--...+..++.+|++.+++.||++.+||++.+..|+|++|||+ +++.+|.+..||.||||+.|.+|+|
T Consensus 717 ~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d 796 (881)
T KOG2452|consen 717 NPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFAD 796 (881)
T ss_pred CcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCC
Confidence 999999999999999999999999999999999999999998889999999999 8999999999999999999999976
Q ss_pred --HHHHHHHHhcCCCCcEEEEecCCHHHHHhh
Q 013505 410 --FEEAVKINNSVPQGLSSSIFTRSPENIFKW 439 (441)
Q Consensus 410 --~~eai~~~n~~~~gl~asv~t~d~~~~~~~ 439 (441)
+++.++.+|+++|||+++|||+|...+.++
T Consensus 797 ~d~~~vl~ran~tefgla~gvftrd~~k~l~v 828 (881)
T KOG2452|consen 797 GDLDAVLSRANATEFGLASGVFTRDINKALYV 828 (881)
T ss_pred CCHHHHHhhccccccccccceeecccchhhhh
Confidence 889999999999999999999999887765
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-69 Score=540.28 Aligned_cols=333 Identities=20% Similarity=0.262 Sum_probs=292.3
Q ss_pred HHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChh----hh--------hHHHHHHHHHHHHH
Q 013505 60 EGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP----EG--------IGEVQEVIDMCDFA 127 (441)
Q Consensus 60 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~ev~~~~~~~~~~ 127 (441)
..+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+.. ++ ..|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999777666533 33 35899999999998
Q ss_pred HHhhhhhcCccccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHH
Q 013505 128 VGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVS 205 (441)
Q Consensus 128 ~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~ 205 (441)
+...+.. +...+.. ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 82 a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPDPV-GEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCCCC-cccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 8765432 3222221 1123457789999999999996 55 6788999999999999999999999999999999999
Q ss_pred HHHHhcCCCCceEEEecC-CH-HHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHH
Q 013505 206 EVFERNKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKL 283 (441)
Q Consensus 206 ~~l~~aglP~gvv~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~ 283 (441)
++|.++|+|+|++|+++| +. +.++.|.+||+|++|+||||+.+|+.|++.+ ++|+++|||||||+||++|||++.
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~ 235 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM 235 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence 999999999999999998 55 6788899999999999999999999999876 699999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCC
Q 013505 284 AVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG 363 (441)
Q Consensus 284 aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga 363 (441)
|++.+++|+|.|+| .|++++|||||+++||+|+++|++++++ .|+
T Consensus 236 Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~ga 280 (406)
T cd07079 236 AVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AGV 280 (406)
T ss_pred HHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CCC
Confidence 99999999999999 9999999999999999999999998765 256
Q ss_pred EEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 364 KILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 364 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+++ ||... ..|++|| ++++|++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++++
T Consensus 281 ~~~-~g~~~---~~~~~pt---v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~ 350 (406)
T cd07079 281 ELR-GDEET---LAILPGA---KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFL 350 (406)
T ss_pred EEe-cCHHH---HHhcccc---cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHH
Confidence 755 33221 1377888 7899999999999999999999999999999999999999999999999999874
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-67 Score=525.83 Aligned_cols=332 Identities=20% Similarity=0.230 Sum_probs=289.4
Q ss_pred HHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHH------HHHHhCCCh------hhhhHHHHHHHHHHHHHHHhhh
Q 013505 65 CSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRL------LSIEMGKIL------PEGIGEVQEVIDMCDFAVGLSR 132 (441)
Q Consensus 65 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~ev~~~~~~~~~~~~~~~ 132 (441)
|++||+.|+++|..+|.++|+++++.|++|+++|+++ ++.|+|||. .+++.|+..+++.++++++..+
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999999999 999999994 3567899999999999998876
Q ss_pred hhcCccccC--CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHh
Q 013505 133 QLNGSVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFER 210 (441)
Q Consensus 133 ~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~ 210 (441)
.+ +..++. ..++...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++.++|.+
T Consensus 81 ~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 PV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred CC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 64 443432 123446778899999999999997 6 668889999999999999999999999999999999999999
Q ss_pred cCCCCceEEEecC-CH-HHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHH
Q 013505 211 NKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSV 288 (441)
Q Consensus 211 aglP~gvv~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i 288 (441)
+|+|+|++|+|+| +. ++++.|..||+|++|+||||+.+|+.+++.. .+|+++|+|||||+||++|||++.|++.+
T Consensus 158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~---~~~~~~e~gGk~p~iV~~dADl~~Aa~~i 234 (398)
T TIGR00407 158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTS---TIPVLGHGDGICHIYLDESADLIKAIKVI 234 (398)
T ss_pred cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhC---CCCEEEecCCcceEEEeCCCCHHHHHHHH
Confidence 9999999999997 54 5789999999999999999999999998753 47999999999999999999999999999
Q ss_pred HHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEec
Q 013505 289 LFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368 (441)
Q Consensus 289 ~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~g 368 (441)
++|+|.+ ||.|++++|+|||+++||+|+++|.++++++++ .+++ .+.+++++. .|
T Consensus 235 v~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~----~g------ 289 (398)
T TIGR00407 235 VNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLE----LG------ 289 (398)
T ss_pred HhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHh----cc------
Confidence 9999965 999999999999999999999999999987643 1222 133333332 11
Q ss_pred CcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 369 GSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 369 g~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
| ||+++++ |++++||+||||++|++|+|++|||+++|+++|||+++|||+|.+++++|+
T Consensus 290 ~-----------~tv~~~~--~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a 348 (398)
T TIGR00407 290 P-----------ATEAIVC--KTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQ 348 (398)
T ss_pred C-----------ccccccc--cccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHH
Confidence 1 3555433 789999999999999999999999999999999999999999999999885
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-67 Score=492.13 Aligned_cols=371 Identities=21% Similarity=0.328 Sum_probs=333.8
Q ss_pred HHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcC
Q 013505 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNG 136 (441)
Q Consensus 58 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~ 136 (441)
+++.++.++.+|.+-+.-|.+.|.+.|+++.+.+++|.+++.+++..|.+|+..++. .|+...+..++++....+.+-.
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 456689999999999999999999999999999999999999999999999999985 6899999999988877766443
Q ss_pred cc-ccCCCC--CceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCC
Q 013505 137 SV-IPSERP--NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213 (441)
Q Consensus 137 ~~-~~~~~~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~agl 213 (441)
.. ...... -...+...+|+|||++|+|||||+.+.+..+++||++||+||+|||+.+|.++..++++| .+. +
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakll----p~Y-l 158 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLL----PQY-L 158 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHH----HHh-c
Confidence 22 221111 124567889999999999999999999999999999999999999999999998876554 444 8
Q ss_pred CCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHH
Q 013505 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAV 293 (441)
Q Consensus 214 P~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~ 293 (441)
+++.+.+|.|+.+....|+.| +.|.|.||||+.+|+.|+.+++++++||+||||||+|++|++|+|++-++++|++|++
T Consensus 159 d~~~~~VV~Ggv~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 159 DQDLIRVVNGGVPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred CcceEEEecCCCchHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 999999999977667778877 8999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC
Q 013505 294 GTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373 (441)
Q Consensus 294 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~ 373 (441)
.|+||.|.+++.|+++.+++.+|+++++..++++. |+...++.+++-+++..+.+|+..+++.- .+++.||.. +
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~-d 311 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGES-D 311 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCcc-c
Confidence 99999999999999999999999999999999984 66667789999999999999998887642 689999986 4
Q ss_pred CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 374 ~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
....|++|||+ ++++++++|+||+||||++|+.+++++|+|+.+|+.+--|++++||+|.+...+|+
T Consensus 312 ~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l 379 (477)
T KOG2456|consen 312 ESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFL 379 (477)
T ss_pred hhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHH
Confidence 45679999999 99999999999999999999999999999999999999999999999999998875
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-67 Score=570.12 Aligned_cols=369 Identities=21% Similarity=0.247 Sum_probs=320.9
Q ss_pred EEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHH
Q 013505 49 TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFA 127 (441)
Q Consensus 49 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~ 127 (441)
.+..++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+|||..+++. +...+++.++++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999999998874 333334444333
Q ss_pred HHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHH
Q 013505 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (441)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~ 207 (441)
.. .+...+. +. ..+....+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.++
T Consensus 85 ~~-~~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YK-DEKTVGV-IE-EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hc-CCCcccc-cC-cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 22 1112221 11 112334577899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHH
Q 013505 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (441)
Q Consensus 208 l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~ 286 (441)
+.++|+|+|++|+|+| +.+.++.|++|++|+.|+||||+.++ +.++.+++|+++|+|||+|+||++|||++.|++
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~ 237 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN 237 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence 9999999999999998 88899999999999999999999965 445667899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEE-
Q 013505 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKI- 365 (441)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v- 365 (441)
.+++|+|+|+||.|++++|||||+++||+|+++|+++ | +|+++..+.++++++++++...|++.
T Consensus 238 ~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~------g---------~~l~~~~~~~~v~~~i~~a~~~~~~~~ 302 (862)
T PRK13805 238 DILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH------G---------AYFLNKKELKKLEKFIFGKENGALNAD 302 (862)
T ss_pred HHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh------C---------CeeCCHHHHHHHHHHHhhccCCCcCcc
Confidence 9999999999999999999999999999999998876 1 58999999999999999987665532
Q ss_pred EecCccc---CCCCceEeeEE------E-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhc----CCCCcEEEEecC
Q 013505 366 LTGGSVI---ESEGNFVQPTI------V-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS----VPQGLSSSIFTR 431 (441)
Q Consensus 366 ~~gg~~~---~~~g~~~~Ptv------l-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~----~~~gl~asv~t~ 431 (441)
+.||... ...|+|++||+ + +++++|++++ |+||||++|++|+|++|||+++|+ ++|||+++|||+
T Consensus 303 ~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~ 381 (862)
T PRK13805 303 IVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTN 381 (862)
T ss_pred ccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 4466421 12488899986 6 6889999887 799999999999999999999988 489999999999
Q ss_pred CHHHHHhhh
Q 013505 432 SPENIFKWL 440 (441)
Q Consensus 432 d~~~~~~~~ 440 (441)
|.+++++|.
T Consensus 382 d~~~~~~~~ 390 (862)
T PRK13805 382 DDELIKEFG 390 (862)
T ss_pred CHHHHHHHH
Confidence 999999874
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-66 Score=548.21 Aligned_cols=330 Identities=21% Similarity=0.242 Sum_probs=290.3
Q ss_pred HHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHH------HHHhC--CChhhh----hHHHHHHHHH
Q 013505 56 EDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLL------SIEMG--KILPEG----IGEVQEVIDM 123 (441)
Q Consensus 56 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a----~~ev~~~~~~ 123 (441)
+.+++++++|++||+.|+++|+.+|.++|+++++.|+++.++|++++ ++|+| ||+.++ ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 77999 888776 4599999999
Q ss_pred HHHHHHhhhhhcCcccc-C-CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHH
Q 013505 124 CDFAVGLSRQLNGSVIP-S-ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201 (441)
Q Consensus 124 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~ 201 (441)
++|++... ...+...+ . ...+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|+++..++
T Consensus 374 ~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 374 IRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 99999874 33344333 1 112334678899999999999999 99998 89999999999999999999999999864
Q ss_pred HHHHHHHHhcCCCCce----EEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeC
Q 013505 202 KLVSEVFERNKLPGAI----FTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277 (441)
Q Consensus 202 ~li~~~l~~aglP~gv----v~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~ 277 (441)
+++.++ +|+|+ +|+|+|+.++++.|..||+|++|+||||+..++.+ ++.++||+++|||||||+||++
T Consensus 451 ----~l~~eA-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~i~~~---aa~~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 451 ----KVITDA-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKLVSQI---KASTKIPVLGHADGICHVYVDK 522 (718)
T ss_pred ----HHHHHH-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHHHHHH---HHhcCCCEEEeCCCcceEEEeC
Confidence 556677 88885 99999867889999999999999999999754444 5556899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHH
Q 013505 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357 (441)
Q Consensus 278 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~ 357 (441)
|||++.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|++
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~ 568 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVA 568 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHH
Confidence 999999999999999999 9999999999999999997 2 25889999
Q ss_pred HHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013505 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437 (441)
Q Consensus 358 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~ 437 (441)
|+++|+++ +||.+.+ | ++.+ ++|++++||+|||+++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 569 a~~~Ga~l-~Gg~~~~--g------~l~~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~ 638 (718)
T PLN02418 569 LRSAGVTL-YGGPRAS--K------LLNI-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAE 638 (718)
T ss_pred HHHCCCEE-ECCcccc--C------eeCC-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHH
Confidence 99999999 6886532 4 2333 78999999999999999999999999999999999999999999999999
Q ss_pred hhh
Q 013505 438 KWL 440 (441)
Q Consensus 438 ~~~ 440 (441)
+|+
T Consensus 639 ~~a 641 (718)
T PLN02418 639 IFL 641 (718)
T ss_pred HHH
Confidence 875
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-63 Score=501.92 Aligned_cols=326 Identities=15% Similarity=0.146 Sum_probs=290.3
Q ss_pred HHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhh-----------hHHHHHHHHHHHHHHHhh
Q 013505 63 KACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-----------IGEVQEVIDMCDFAVGLS 131 (441)
Q Consensus 63 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-----------~~ev~~~~~~~~~~~~~~ 131 (441)
++|++||+.|+++|..+|.++|+++++.|++++++|+++++.|+|||+.++ ..|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 368999999999999999999999999999999999999999999996543 248889999999988665
Q ss_pred hhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhc
Q 013505 132 RQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERN 211 (441)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~a 211 (441)
....+...+. ....+++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|+++..+++++.+++ ++
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~-~~ 155 (397)
T cd07077 81 GHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD-AA 155 (397)
T ss_pred CcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh-hc
Confidence 4444332221 2356789999999999999999999 99999999999999999999999999999888776664 36
Q ss_pred CCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHH
Q 013505 212 KLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLF 290 (441)
Q Consensus 212 glP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~ 290 (441)
|+|++++++++| +.+.+..|+.||++++|+||||+++++.+++.+. .+|+++|+|||+|+||++|||++.|++.+++
T Consensus 156 g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~ 233 (397)
T cd07077 156 HGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHD 233 (397)
T ss_pred CCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHH
Confidence 899999999998 7789999999999999999999999999998874 6899999999999999999999999999999
Q ss_pred HHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCc
Q 013505 291 AAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS 370 (441)
Q Consensus 291 ~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~ 370 (441)
++|.| ||.|++++|||||+++||+|+++|+++++. +|++++.||
T Consensus 234 ~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~- 277 (397)
T cd07077 234 SKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQET- 277 (397)
T ss_pred hhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCc-
Confidence 99999 999999999999999999999999998864 577777766
Q ss_pred ccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHH----HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 371 VIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFE----EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 371 ~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~----eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
.++|+.|| ++|++.+||+||||++|++|+|++ +|++++|+++|||+++|||+|.+++++|.
T Consensus 278 ----~~~~~~pt-----~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~ 342 (397)
T cd07077 278 ----KPLSKETT-----PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFV 342 (397)
T ss_pred ----eeeEEecc-----CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHH
Confidence 34677776 788999999999999999999996 66668899999999999999999999874
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-61 Score=510.36 Aligned_cols=331 Identities=18% Similarity=0.223 Sum_probs=277.4
Q ss_pred HHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH----------------HHHHH
Q 013505 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG----------------EVQEV 120 (441)
Q Consensus 57 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----------------ev~~~ 120 (441)
+++..+++|++||+.|+.+|.++|.++|+++++.|+++.++|+ .++||++.+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4888899999999999999999999999999999999999996 588898887764 37778
Q ss_pred HHHHHHHHHhhhhhcCccccC-C-CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHH
Q 013505 121 IDMCDFAVGLSRQLNGSVIPS-E-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198 (441)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~ 198 (441)
++.++++++. ....+...+. . ..+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++.
T Consensus 363 ~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 8888888763 2222332221 1 11233567899999999999999 9998 589999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCC
Q 013505 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (441)
Q Consensus 199 ~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~d 278 (441)
.+++++.++| ..|.|++++|+|+|+.+.++.|..|+++++|+||||+.+|+.|++.++ +|+++|+|||||+||++|
T Consensus 440 ~l~~l~~~al-p~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~d 515 (715)
T TIGR01092 440 ILHKVITEAI-PIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKS 515 (715)
T ss_pred HHHHHHHHHc-CCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCC
Confidence 8766554442 222334479999876678899999999999999999999999998875 999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHH
Q 013505 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (441)
Q Consensus 279 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (441)
||++.|++.+..+.|.+ ||.|++++|||||+++||+ | .+.++++++
T Consensus 516 ADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~~ 561 (715)
T TIGR01092 516 ASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDML 561 (715)
T ss_pred CCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHHHHHH
Confidence 99999987777676655 9999999999999999985 1 267788888
Q ss_pred HHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHh
Q 013505 359 KSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438 (441)
Q Consensus 359 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~ 438 (441)
+++|++++ ||.+.+ .|+. + .+++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+++++
T Consensus 562 ~~~Ga~l~-Gg~~~~---~~~~---~-~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~ 633 (715)
T TIGR01092 562 RTEGVTIH-GGPRFA---AYLT---F-NISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEF 633 (715)
T ss_pred HHCCCEEE-CCcchh---heec---c-CCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHH
Confidence 88999985 775422 2332 1 36789999999999999999999999999999999999999999999999998
Q ss_pred hh
Q 013505 439 WL 440 (441)
Q Consensus 439 ~~ 440 (441)
|+
T Consensus 634 ~~ 635 (715)
T TIGR01092 634 FL 635 (715)
T ss_pred HH
Confidence 75
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-60 Score=473.16 Aligned_cols=313 Identities=38% Similarity=0.671 Sum_probs=291.3
Q ss_pred HHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCC
Q 013505 64 ACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143 (441)
Q Consensus 64 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (441)
+|++|++.|+.++..+|.++|+++++.|.++.++|+++++.|+|||+.+++.|+..+++.+++++...+...+...+...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 68899999999999999999999999999999999999999999999999999999999999999888776553333223
Q ss_pred CCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC
Q 013505 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG 223 (441)
Q Consensus 144 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g 223 (441)
.+...+.+++|+|||++|.|||+|+...++.+++||++||+||+|||+.+|.++..+ .++|.++|+|+|++++++|
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l----~~~l~~ag~p~~~v~~~~~ 157 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALAL----AELLQEAGLPPGVVNVVPG 157 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHhcCCCcCeEEEEEc
Confidence 445677889999999999999999999999999999999999999999999999875 6678889999999999999
Q ss_pred -CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccC
Q 013505 224 -GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302 (441)
Q Consensus 224 -~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a 302 (441)
+.+.++.|+.|++++.|.||||.++++.|.+.++++++|+++|+||+|++||++|+|++.|++.++.++|.++||.|++
T Consensus 158 ~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s 237 (367)
T cd06534 158 GGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTA 237 (367)
T ss_pred CchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCC
Confidence 5568999999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred cceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeE
Q 013505 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382 (441)
Q Consensus 303 ~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Pt 382 (441)
+++||||++++|+|+++|+ |
T Consensus 238 ~~~v~v~~~~~~~f~~~l~------------------------------------------------------------t 257 (367)
T cd06534 238 ASRLLVHESIYDEFVEKLV------------------------------------------------------------T 257 (367)
T ss_pred CcEEEEcHHHHHHHHHhhc------------------------------------------------------------e
Confidence 9999999999999999987 5
Q ss_pred EE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 383 IV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 383 vl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+ +++++++++++|+|||+++|++|+|++|+++++|++++||+++|||+|.+.+++++
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~ 316 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHH
Confidence 66 67788999999999999999999999999999999999999999999999998874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=295.52 Aligned_cols=352 Identities=13% Similarity=0.132 Sum_probs=249.7
Q ss_pred CHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHH--H
Q 013505 54 SLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALRE----KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF--A 127 (441)
Q Consensus 54 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~----~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~--~ 127 (441)
+..++++.++..+...+....++.++..+++.++++.+.. .+.+..+.+..-+|.+...-+..+......|+- .
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l 82 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENL 82 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHH
Confidence 3445555555555555566778888888888888877742 345555666667777765555554444444431 1
Q ss_pred HHh-hhhhc-CccccCCCC-CceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHH
Q 013505 128 VGL-SRQLN-GSVIPSERP-NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLV 204 (441)
Q Consensus 128 ~~~-~~~~~-~~~~~~~~~-~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li 204 (441)
... ...+. ...+....+ ....+++++|+|+|++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..+
T Consensus 83 ~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l---- 157 (422)
T cd07080 83 ERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATAL---- 157 (422)
T ss_pred HHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHH----
Confidence 111 11121 111222222 345677899999999999999999 7899999999999999999999999999876
Q ss_pred HHHHHhcCCCC----ceEEEe--cC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCe-EEEe
Q 013505 205 SEVFERNKLPG----AIFTSF--CG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA-IIIM 276 (441)
Q Consensus 205 ~~~l~~aglP~----gvv~~v--~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~-~iV~ 276 (441)
.++|.++ +|+ +.++++ +| +.++++.|+.++ |.|+||||.++++.|++.++++ +.++|+|||++ +|+.
T Consensus 158 ~~~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 158 LRSLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVID 232 (422)
T ss_pred HHHHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEec
Confidence 5556677 677 778888 46 556899999987 9999999999999999998854 56999999955 5555
Q ss_pred CCC----CHHHHHHHHHHHHHhcCCCCccCcceEEEeccc---HHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHH
Q 013505 277 DDA----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI---YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRK 349 (441)
Q Consensus 277 ~da----dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i---~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~ 349 (441)
+++ |++.+++.+++++|.|+||.|+|+++||||+++ +++|.+.|.++++++....|... + +.....
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~------~-~~~~~~ 305 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALS------L-SAAESA 305 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCC------C-CHHHHH
Confidence 568 999999999999999999999999999999999 99999999999998765444321 1 334444
Q ss_pred HHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 013505 350 NFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428 (441)
Q Consensus 350 ~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv 428 (441)
++...-..+...+.+.... ...+ .||+ .-.+ .+. ....+-.+.|.++++++|++..++. |--|.++
T Consensus 306 ~~~~~r~~~~~~~~~~~~~----~~~~----~~v~~~~~~--~~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~ 372 (422)
T cd07080 306 KIARARLEAEFYELKGGVS----RDLG----WTVIISDEI--GLE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGL 372 (422)
T ss_pred HHHHHHHHHHHHHHhcCCC----CCCC----eEEEEeCCC--Ccc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEe
Confidence 4444333333322221111 1122 2344 3222 221 1466678999999999999999986 6678999
Q ss_pred ecCCHHH
Q 013505 429 FTRSPEN 435 (441)
Q Consensus 429 ~t~d~~~ 435 (441)
|..+.+.
T Consensus 373 ~~~~~~~ 379 (422)
T cd07080 373 APSPAEL 379 (422)
T ss_pred ecChhhH
Confidence 8888775
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.6e-31 Score=249.87 Aligned_cols=336 Identities=20% Similarity=0.254 Sum_probs=274.3
Q ss_pred HHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH------hCCChhhh------hHHHHHHHHH
Q 013505 56 EDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIE------MGKILPEG------IGEVQEVIDM 123 (441)
Q Consensus 56 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e------~Gk~~~~a------~~ev~~~~~~ 123 (441)
.++.+..++|++|......++..+|.+.|.++++.|+++.+++.++...| +|.+-..- ...++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 45778889999999999999999999999999999999988888876665 44332211 1246667777
Q ss_pred HHHHHHhhhhhcCccccCCCCCc-eeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHH
Q 013505 124 CDFAVGLSRQLNGSVIPSERPNH-MMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202 (441)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~ 202 (441)
++..+.+.+++......+..+++ ..+..+.|+||+++| |.......+...+.+|.+||+||+|.+..+..+...+++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~ 160 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE 160 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence 77777777665443333333443 455678899999999 888888888888999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEecC-C-HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCC
Q 013505 203 LVSEVFERNKLPGAIFTSFCG-G-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDAD 280 (441)
Q Consensus 203 li~~~l~~aglP~gvv~~v~g-~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dad 280 (441)
+|.+.|.++|+|.+.||+++. + ..+.+.|..+..||.|...||..-.+.+.+++. .||+-..-|++.++|+++||
T Consensus 161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~AD 237 (417)
T COG0014 161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESAD 237 (417)
T ss_pred HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccCC
Confidence 999999999999999999987 4 556667777889999999999999999988765 78877777999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHH
Q 013505 281 IKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360 (441)
Q Consensus 281 l~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~ 360 (441)
+|+|.+-++.++..+.+ .|++.+.++||+.+.++|+..|.+.+...
T Consensus 238 ld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~--------------------------------- 283 (417)
T COG0014 238 LDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA--------------------------------- 283 (417)
T ss_pred HHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc---------------------------------
Confidence 99999999999999999 99999999999999999999998887632
Q ss_pred CCCEEEecCcccCCCCceEeeEEE-E--cCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013505 361 QGGKILTGGSVIESEGNFVQPTIV-E--ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437 (441)
Q Consensus 361 ~Ga~v~~gg~~~~~~g~~~~Ptvl-~--~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~ 437 (441)
|.++........ ++ + .+....-+..|..-+++.|-.++++++||+.+|..+.+|+-+|.|+|...++
T Consensus 284 -gvelr~d~~~~~---------~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~ 353 (417)
T COG0014 284 -GVELRGDAEALA---------LLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAE 353 (417)
T ss_pred -CeEEEcCHHHHH---------hccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHH
Confidence 222222111000 00 1 1222233567899999999999999999999999999999999999999999
Q ss_pred hhh
Q 013505 438 KWL 440 (441)
Q Consensus 438 ~~~ 440 (441)
+|.
T Consensus 354 ~F~ 356 (417)
T COG0014 354 RFV 356 (417)
T ss_pred HHH
Confidence 996
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=194.76 Aligned_cols=336 Identities=21% Similarity=0.241 Sum_probs=257.1
Q ss_pred HHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHH------HHHhCCChhh------hhHHHHHHHHHHH
Q 013505 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLL------SIEMGKILPE------GIGEVQEVIDMCD 125 (441)
Q Consensus 58 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~Gk~~~~------a~~ev~~~~~~~~ 125 (441)
+++..+.|+.+++..+.++.++|.++|.++++.|..+..++.++. +.+.|..... .-+.+......++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 456678899999999999999999999999999988766555443 3455532211 1123444444455
Q ss_pred HHHHhhhhhcCccccCC-CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHH
Q 013505 126 FAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLV 204 (441)
Q Consensus 126 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li 204 (441)
..+...+.......... .++-..+..-.|+||.++| |....-.+..-...|++.||.+++|....+..+...+.+++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v 159 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLV 159 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHH
Confidence 55543333221111111 1233444566799999999 87777666666677999999999999999999999999999
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHH
Q 013505 205 SEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLA 284 (441)
Q Consensus 205 ~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~a 284 (441)
.+++.+.|.|.+.+++|....++.+.|-.+..||.|...||.+-.|.|..... .||...-.|.+.++|++|||+++|
T Consensus 160 ~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~~kA 236 (433)
T KOG4165|consen 160 QEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADLDKA 236 (433)
T ss_pred HHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCHHHH
Confidence 99999999999999999987788888888899999999999999999987654 899999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCccCcceEEEeccc-HHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCC
Q 013505 285 VRSVLFAAVGTAGQRCTTCRRLLIHESI-YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG 363 (441)
Q Consensus 285 a~~i~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga 363 (441)
-+-+..+++.|.. .|++.+.+++|++. ...|.+.|...+. .+|.
T Consensus 237 ~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~----------------------------------~~gV 281 (433)
T KOG4165|consen 237 KRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK----------------------------------EEGV 281 (433)
T ss_pred HHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH----------------------------------hcCe
Confidence 9999999999987 99999999999983 3445555544332 2454
Q ss_pred EEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhhC
Q 013505 364 KILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWLG 441 (441)
Q Consensus 364 ~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~~ 441 (441)
++.+ |++...-..|- +|...-++.|.-.-.++|-.+++.++||+.+|..+.+++-+|.|+|.+.+++|.+
T Consensus 282 tl~a-gpkl~~~l~~~-------p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~ 351 (433)
T KOG4165|consen 282 TLHA-GPKLAALLKFS-------PPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLK 351 (433)
T ss_pred EEec-ChhHHhhcCcC-------CchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHh
Confidence 5543 33322211111 3344456677777789999999999999999999999999999999999999863
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.3e-17 Score=163.22 Aligned_cols=335 Identities=15% Similarity=0.146 Sum_probs=213.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHH--HHhh-hhhcC-ccccCCCCCce
Q 013505 74 ELPAPKRGEVVRQIGDALREK--LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFA--VGLS-RQLNG-SVIPSERPNHM 147 (441)
Q Consensus 74 ~~~~~~R~~~L~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~--~~~~-~~~~~-~~~~~~~~~~~ 147 (441)
.+|.++...+|.++++.+... .....+.+..-+|.+....+. ++....+|+.- .... ..+.. ..+....+...
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~ 80 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGD 80 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence 355666666666666666542 122444555556665554443 44443333211 0111 11211 12222223334
Q ss_pred eEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEe--cC-C
Q 013505 148 MLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSF--CG-G 224 (441)
Q Consensus 148 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v--~g-~ 224 (441)
.+.++.|.|+++.|.|.|.|+.. ++.++.+|++||..|+|+|+..|..+..+.+.|.++..+..+-+ .+.++ +| +
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~-~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~-~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVG-FYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLAD-SIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchH-HHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhh-cEEEEEecCCc
Confidence 66778999999999999999964 45888999999999999999999999988776666543322322 35566 45 6
Q ss_pred HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCC-CCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCc
Q 013505 225 AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTC 303 (441)
Q Consensus 225 ~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelg-G~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 303 (441)
.++.+.+.. ..|.++.+||.++.+.+.+.... ..-.+..| -.+.++|..+++++.+++.+..-.+.+.+|.|.|+
T Consensus 159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~--~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp 234 (399)
T PF05893_consen 159 EELEEALSQ--QADAVVAWGGDETIRAIRQPLPP--GARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP 234 (399)
T ss_pred hHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCC--CCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence 677777775 58999999999999999995442 34445555 45566777778999999999999999999999999
Q ss_pred ceEEEe---cccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHH-----HHHHCCCEEEecCcccCCC
Q 013505 304 RRLLIH---ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIE-----NIKSQGGKILTGGSVIESE 375 (441)
Q Consensus 304 ~~v~V~---~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~-----~a~~~Ga~v~~gg~~~~~~ 375 (441)
+.|||. +.-.++|.++|.+.+++..---|... .+......+....+ .+...+.++. ++. +
T Consensus 235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~----~ 302 (399)
T PF05893_consen 235 QVIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVW-SSD----D 302 (399)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCccee-ecC----C
Confidence 999999 34468888888887776532222211 11222222333322 2444444454 221 1
Q ss_pred CceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCC
Q 013505 376 GNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432 (441)
Q Consensus 376 g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d 432 (441)
+ ..||+.-+. + ......++-.+.|.++++.+|++..+|....--|.+++...
T Consensus 303 ~---~~~V~~~~~-~-~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~ 354 (399)
T PF05893_consen 303 N---SWTVIVSPE-P-PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS 354 (399)
T ss_pred C---CEEEEECCC-c-ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh
Confidence 1 235552111 1 22334556799999999999999999988541356766444
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3e-12 Score=104.64 Aligned_cols=119 Identities=30% Similarity=0.406 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHH-HHCCCEEEecCcccCCCCceEeeEEEEcCCCCC
Q 013505 313 YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI-KSQGGKILTGGSVIESEGNFVQPTIVEISPTAD 391 (441)
Q Consensus 313 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a-~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 391 (441)
.....+.|+++.+.+++-+...++++. .....++.++++.- ...|..+..-|. ..|+|..||+|.|+|+|.
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLsvtP~ms 79 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILSVTPNMS 79 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEEecCCcc
Confidence 456677788888889888777778876 56677777777641 112333332232 378999999999999999
Q ss_pred ccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhh
Q 013505 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW 439 (441)
Q Consensus 392 i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~ 439 (441)
++.||+||||+..+.-++++|+|.++|+++||....|||.+.+.+++|
T Consensus 80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~ 127 (157)
T KOG2449|consen 80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKF 127 (157)
T ss_pred eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhh
Confidence 999999999999999999999999999999999999999999998876
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.2e-08 Score=86.02 Aligned_cols=147 Identities=17% Similarity=0.256 Sum_probs=106.9
Q ss_pred CeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHH
Q 013505 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (441)
Q Consensus 271 ~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (441)
.-+||++|.|++.|+..++.+.-.--| ..+...|+|||++.|+|+++++.+++.+ ++... +. ..
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl------~~~va-----~H---pn 69 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL------SPQVA-----NH---PN 69 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC------Chhhc-----cC---cH
Confidence 358999999999999999998875544 4578899999999999999999988754 22221 11 22
Q ss_pred HHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcC--CCCcEEE
Q 013505 351 FEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSV--PQGLSSS 427 (441)
Q Consensus 351 ~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~--~~gl~as 427 (441)
+.+.++....-+++++.++.... -..-.|.|+ +++.. .+-. --.+|+++..|++..||+++.+.- .|+ +.|
T Consensus 70 y~rsl~~i~~l~~~~I~~~~~~~--~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVs 143 (215)
T PF07368_consen 70 YLRSLKKIKCLNAKTIVADFENV--PPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVS 143 (215)
T ss_pred HHHHHHHHHhcCCeEEEecccCC--CCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEE
Confidence 44445555567899998854311 112268888 76643 2222 224699999999999999999864 666 999
Q ss_pred EecCCHHHHHhh
Q 013505 428 IFTRSPENIFKW 439 (441)
Q Consensus 428 v~t~d~~~~~~~ 439 (441)
||++-.+.+-++
T Consensus 144 iW~ekla~~Yel 155 (215)
T PF07368_consen 144 IWNEKLASAYEL 155 (215)
T ss_pred EeCcHHHHHHHH
Confidence 999988876554
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.1e-07 Score=104.99 Aligned_cols=101 Identities=21% Similarity=0.229 Sum_probs=80.1
Q ss_pred CCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC
Q 013505 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG 223 (441)
Q Consensus 144 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g 223 (441)
+|..+.....|+|+|++|+||| ..++.+++.||++||+||+||++.++. . + +.+|..+.+.+
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~---~--------~--~~Lp~~~~~~~-- 1129 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA---A--------L--ADLPGLVAARI-- 1129 (1208)
T ss_pred CCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH---H--------H--HhCcccccccc--
Confidence 3556667788999999999999 457789999999999999999988652 1 1 23566555544
Q ss_pred CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCcee
Q 013505 224 GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCL 264 (441)
Q Consensus 224 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~ 264 (441)
.++..+..++++++|.|+||+++.+.|.+..+++.++++
T Consensus 1130 --~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Iv 1168 (1208)
T PRK11905 1130 --DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIV 1168 (1208)
T ss_pred --ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcc
Confidence 234578888899999999999999999999988766554
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0095 Score=68.21 Aligned_cols=101 Identities=17% Similarity=0.109 Sum_probs=73.9
Q ss_pred CceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCC
Q 013505 145 NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGG 224 (441)
Q Consensus 145 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~ 224 (441)
|..+.....|+|+|+++.+-.- ..+.+++.+|++||.||+..++.. . +++ +++|+.+.+.+.-.
T Consensus 1178 GE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~~---~--------~~~--~~Lp~~v~~~v~~~ 1241 (1318)
T PRK11809 1178 GERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDALH---R--------ALV--AALPAAVQARIQLA 1241 (1318)
T ss_pred CCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCchh---H--------HHH--HhccHHHHhHhhhc
Confidence 4455566789999999987333 577899999999999988644331 1 112 46898887765321
Q ss_pred HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCcee
Q 013505 225 AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCL 264 (441)
Q Consensus 225 ~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~ 264 (441)
.........++.|.|.|..+..+.+.++.+++.++++
T Consensus 1242 ---~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1242 ---KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred ---cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 1222334579999999999999999999998888766
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=93.30 E-value=10 Score=38.31 Aligned_cols=166 Identities=18% Similarity=0.231 Sum_probs=73.5
Q ss_pred CCceeEEEEeccceEEEEcCC-CchHH-hHHHHhhhhhcCCCEE--EEecCCCChhhHHHHHHHHHHHHHhcCCCCceEE
Q 013505 144 PNHMMLETWNPLGVVGVITAF-NFPCA-VLGWNACIALVCGNCV--VWKGAPTTPLITIAITKLVSEVFERNKLPGAIFT 219 (441)
Q Consensus 144 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~i~~ALaaGN~V--Vlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~ 219 (441)
++...-.++.|+.-|++..|. .+|+. ++++.++||-.+|..= +.-|+...-...-. +.-+...+|+. .++.
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~----vL~Aa~~~Gv~-evy~ 170 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPA----VLAAAHLAGVD-EVYK 170 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HH----HHHHHHHTT-S-EEEE
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHH----HHHHHHHcCCC-EEEe
Confidence 455556778999999999993 34443 4555788999998754 44554441111111 12345667774 2222
Q ss_pred EecCCHHHHHHHHc----CCCccEEEeeCChHHHHHHHHHhhccCCceeec-CCCCCe--EEEeCCCCHHHHHHHHHHHH
Q 013505 220 SFCGGAEIGQAIAK----DPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLE-LSGNNA--IIIMDDADIKLAVRSVLFAA 292 (441)
Q Consensus 220 ~v~g~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~le-lgG~~~--~iV~~dadl~~aa~~i~~~~ 292 (441)
-||.+...+|.- -|+||+|+=-|+.=+...=+.-.+ .+-.. +-|.+= +|-+++||.+.++..++.-+
T Consensus 171 --vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQA 244 (412)
T PF00815_consen 171 --VGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG----DVGIDMIAGPSEVLVIADETANPEFVAADLLAQA 244 (412)
T ss_dssp ----HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH----S-EES------EEEEEE-TTS-HHHHHHHHHHHH
T ss_pred --cccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC----CcccCCCCCCCceEEEECCCCCHHHHHHHHHHHh
Confidence 255554455543 489999998888755422221112 11111 123333 34466789999888877554
Q ss_pred HhcCCCCccCcceEEEecc--cHHHHHHHHHHHHH
Q 013505 293 VGTAGQRCTTCRRLLIHES--IYQTVLDQLVDVYK 325 (441)
Q Consensus 293 ~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~ 325 (441)
=.... .+-++|..+ ..++..+.+.++++
T Consensus 245 EHd~~-----a~~vLvt~s~~la~~V~~~v~~~l~ 274 (412)
T PF00815_consen 245 EHDPD-----AQAVLVTTSEELAEAVEAEVERQLE 274 (412)
T ss_dssp TT-TT------EEEEEES-HHHHHHHHHHHHHHHT
T ss_pred ccCCC-----CceEEEECCHHHHHHHHHHHHHHHH
Confidence 44332 344666554 34444444444443
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.64 E-value=58 Score=32.94 Aligned_cols=168 Identities=17% Similarity=0.223 Sum_probs=94.1
Q ss_pred CCCceeEEEEeccceEEEEcC---CCchHHhHHHHhhhhhcCCCEE--EEecCCCChhhHHHHHHHHHHHHHhcCCCCce
Q 013505 143 RPNHMMLETWNPLGVVGVITA---FNFPCAVLGWNACIALVCGNCV--VWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217 (441)
Q Consensus 143 ~~~~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~i~~ALaaGN~V--Vlkps~~~p~~~~~l~~li~~~l~~aglP~gv 217 (441)
.++...-.++.|+--|++..| .-||-. +++...||-.+|+.= +.-|....-..... .-+...+|+.. +
T Consensus 105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypSt-vLM~avPAkvAGv~~Iv~~tPp~~~gv~p~i-----L~AA~~~Gv~e-I 177 (425)
T COG0141 105 EPGVVLGQRWRPIERVGLYVPGGKAAYPST-VLMNAVPAKVAGVEEIVVVTPPPKDGVNPEI-----LAAARLAGVDE-V 177 (425)
T ss_pred cCCcEEEEEEEEhhheEEEccCCCcCChHH-HHHhhccHhhcCCceEEEECCCCCCCCCHHH-----HHHHHHhCcHH-H
Confidence 456666778999999999999 556554 445778999999864 44555542212211 12234556542 1
Q ss_pred EEEecCCHHHHHHHHcC----CCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEE-eCCCCHHHHHHHHHHHH
Q 013505 218 FTSFCGGAEIGQAIAKD----PRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIII-MDDADIKLAVRSVLFAA 292 (441)
Q Consensus 218 v~~v~g~~~~~~~L~~~----~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV-~~dadl~~aa~~i~~~~ 292 (441)
++ -||.+...+|.-. |.||+|.=-|+.-+...=+.-.+ ..-+=+..|-..-+|| ++++|.+.++..++.-+
T Consensus 178 y~--vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g--~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQA 253 (425)
T COG0141 178 YK--VGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG--VVGIDMIAGPSEVLVIADETANPDFVAADLLSQA 253 (425)
T ss_pred HH--ccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC--CcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 22 2577777777766 89999998887654322111111 1111122232333333 55689999888877554
Q ss_pred HhcCCCCccCcceEEEecc--cHHHHHHHHHHHHHh
Q 013505 293 VGTAGQRCTTCRRLLIHES--IYQTVLDQLVDVYKQ 326 (441)
Q Consensus 293 ~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~ 326 (441)
=... ..+.|+|..+ ..++..+.+.+++..
T Consensus 254 EHd~-----~a~aiLvT~s~~la~~v~~~v~~~l~~ 284 (425)
T COG0141 254 EHDP-----DAQAILVTDSEELAEAVEAAVERQLET 284 (425)
T ss_pred hcCC-----CceEEEEeCcHHHHHHHHHHHHHHHHh
Confidence 4332 2455666554 334444444444443
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=80.69 E-value=12 Score=38.86 Aligned_cols=104 Identities=18% Similarity=0.133 Sum_probs=70.9
Q ss_pred CceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCC
Q 013505 145 NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGG 224 (441)
Q Consensus 145 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~ 224 (441)
+..+.....|.|-|+++.+ +....+.+++..|++||.+++-+.+.. +.++ ..+|.++-..+.-.
T Consensus 634 GErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-----------aa~~--~~l~~~v~~~~~~~ 697 (769)
T COG4230 634 GERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-----------AALL--KDLPSAVASRIQVA 697 (769)
T ss_pred ccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-----------HHHH--Hhchhhhhhheeec
Confidence 4455666789999999866 666788899999999999998664321 1111 13666542222211
Q ss_pred HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCC
Q 013505 225 AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS 268 (441)
Q Consensus 225 ~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelg 268 (441)
.++ ...-..+.+.|.|-.+-.+.+.+..+.+.+|++.-.+
T Consensus 698 ---~~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~ 737 (769)
T COG4230 698 ---KDW-TADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG 737 (769)
T ss_pred ---cch-hhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence 122 3344688999999999999999988877777765444
|
|
| >PF12340 DUF3638: Protein of unknown function (DUF3638); InterPro: IPR022099 This domain family is found in eukaryotes, and is approximately 230 amino acids in length | Back alignment and domain information |
|---|
Probab=80.63 E-value=8.7 Score=35.62 Aligned_cols=86 Identities=20% Similarity=0.377 Sum_probs=60.5
Q ss_pred eecCC-CCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC-----CCCCCCC
Q 013505 264 LLELS-GNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG-----DPLEKGT 337 (441)
Q Consensus 264 ~lelg-G~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~p~~~~~ 337 (441)
.+-+| ||+.+|+. ++...+.++.+ .=|++|.+..+++-.+.|..++..+ +| -|++..+
T Consensus 47 QlnMGeGKTsVI~P-----------mla~~LAdg~~----LvrviVpk~Ll~q~~~~L~~~lg~l-~~r~i~~lpFsR~~ 110 (229)
T PF12340_consen 47 QLNMGEGKTSVIVP-----------MLALALADGSR----LVRVIVPKALLEQMRQMLRSRLGGL-LNRRIYHLPFSRST 110 (229)
T ss_pred eecccCCccchHHH-----------HHHHHHcCCCc----EEEEEcCHHHHHHHHHHHHHHHHHH-hCCeeEEecccCCC
Confidence 45556 89877641 23334445443 4589999999998888898888765 33 2666666
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCCEEEecC
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg 369 (441)
.+ +....+.+.+..+++.+.|+.+++-.
T Consensus 111 ~~----~~~~~~~~~~l~~~~~~~~gill~~P 138 (229)
T PF12340_consen 111 PL----TPETLEKIRQLLEECMRSGGILLATP 138 (229)
T ss_pred CC----CHHHHHHHHHHHHHHHHcCCEEEeCh
Confidence 43 46778888899999999998887654
|
There are two conserved sequence motifs: LLE and NMG. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 441 | ||||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 1e-138 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 1e-135 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 5e-48 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 7e-48 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 1e-47 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-47 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 4e-47 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 4e-47 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-47 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 3e-46 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 2e-45 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 4e-45 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 7e-45 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 8e-44 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-43 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 3e-43 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-42 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-42 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 4e-42 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-42 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 2e-41 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 7e-41 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 2e-40 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 4e-40 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 4e-40 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 4e-40 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 4e-40 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 6e-40 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 6e-40 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 9e-40 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 1e-39 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-39 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-39 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-39 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 4e-39 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 6e-39 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 6e-39 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 6e-39 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 6e-39 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 7e-39 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 9e-39 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-38 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-38 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 2e-38 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 3e-38 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-38 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 4e-38 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-38 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 8e-38 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-37 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 2e-37 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 3e-37 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-37 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 4e-37 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-37 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 5e-37 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 1e-35 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 6e-35 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 1e-34 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 2e-34 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 6e-34 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 7e-34 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-33 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 2e-33 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 3e-33 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 6e-33 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-32 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-32 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 3e-32 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 3e-32 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 6e-32 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 9e-32 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 5e-31 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 6e-31 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 4e-30 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 3e-28 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 3e-25 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-24 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-24 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-24 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 5e-24 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 3e-15 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 5e-15 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-13 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 3e-12 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 1e-09 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 1e-09 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 1e-09 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 3e-09 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 2e-08 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 2e-07 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 2e-06 |
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 441 | |||
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 1e-133 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 1e-130 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-129 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 1e-121 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 1e-121 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-117 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 1e-115 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 1e-112 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 1e-111 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-110 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-105 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 1e-102 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 1e-101 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 1e-101 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-101 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 1e-100 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 9e-99 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 2e-98 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 3e-95 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 4e-95 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 4e-95 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 5e-95 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 3e-94 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 9e-94 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-93 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 1e-93 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 8e-93 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 1e-92 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 2e-91 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 5e-91 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 4e-89 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 4e-89 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 2e-88 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-87 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-87 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 7e-87 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 8e-87 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 9e-84 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 3e-82 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 9e-80 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 3e-78 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 3e-72 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 4e-71 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 2e-34 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 4e-33 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 9e-04 |
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 665 bits (1719), Expect = 0.0
Identities = 245/442 (55%), Positives = 319/442 (72%), Gaps = 2/442 (0%)
Query: 1 MEFAKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEE 60
+ + +Y +L E+GL E G NG W G +++ P NN+ IA V +AS+ DYEE
Sbjct: 5 LLINQPQYAWLKELGLREENEG-VYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEE 63
Query: 61 GMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEV 120
+K EA KIW ++PAPKRGE+VRQIGDALREK+ LG L+S+EMGKIL EG+GEVQE
Sbjct: 64 TVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEY 123
Query: 121 IDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180
+D+CD+AVGLSR + G ++PSER H ++E WNP+G+VG+ITAFNFP AV GWN IA++
Sbjct: 124 VDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMI 183
Query: 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLV 240
CGN +WKGAPTT LI++A+TK++++V E NKLPGAI + CGGA+IG A+AKD R++L+
Sbjct: 184 CGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLL 243
Query: 241 SFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRC 300
SFTGST+VG V V +RFG+ LLEL GNNAII +DAD+ L V S LFAAVGTAGQRC
Sbjct: 244 SFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRC 303
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
TT RRL IHESI+ V+++L Y Q+++G+P + L GPLHT ++ F +E K
Sbjct: 304 TTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKK 363
Query: 361 QGGKILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS 419
+GG ++ GG V++ GN+V+PTIV + A I E FAP+LYV KFQ EE NN
Sbjct: 364 EGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNE 423
Query: 420 VPQGLSSSIFTRSPENIFKWLG 441
V QGLSSSIFT+ IF+WLG
Sbjct: 424 VKQGLSSSIFTKDLGRIFRWLG 445
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 392 bits (1009), Expect = e-133
Identities = 121/430 (28%), Positives = 218/430 (50%), Gaps = 24/430 (5%)
Query: 23 CFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+NG+ + S NP +Q + +V +A+ + E+ +++ EA + W + +R
Sbjct: 40 LIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERA 99
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++ + +R + H L E GK E + E ID ++ +LN
Sbjct: 100 NILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEIL 159
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
RP + P+GV I+ +NF A++ A +V GN VV K A TTP++
Sbjct: 160 SRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFV 219
Query: 202 KLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+++ + V N +PG+ GAE+G + P+ SL++FTGS VG+ + +
Sbjct: 220 EVLEDAGLPKGVI--NYVPGS-------GAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270
Query: 256 VHQRFG------KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ ++E+ G + +++ DAD+ LA S+L +A G +GQ+C+ R +IH
Sbjct: 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIH 330
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
+ +Y VL++ V + K + +GDP + +GP+ ++ + IE K + G+++TGG
Sbjct: 331 KDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKE-GRLMTGG 389
Query: 370 SVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
S G F+QPTI+ + P A I++EE+F PV+ K F+ A++I N+ GL+ ++
Sbjct: 390 EGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAV 449
Query: 429 FTRSPENIFK 438
TR+ +I +
Sbjct: 450 ITRNRAHIEQ 459
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 383 bits (987), Expect = e-130
Identities = 119/430 (27%), Positives = 211/430 (49%), Gaps = 26/430 (6%)
Query: 24 FVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
++ G+W + S+NP ++ + T +A + E ++A +A K W + P R
Sbjct: 41 YIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSR 100
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS- 141
++ + +R + L L E+GK E +V E ID ++ + + +
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
P + PLG VI +NFP A+ + GN V+ K A ++ +
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 202 KLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
++ E V N LPG G E+G + + PRI ++FTGS +VGL + +
Sbjct: 221 EIFHEAGFPPGVV--NFLPGV-------GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271
Query: 256 VHQRFG------KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309
+ + +E G NAII+ + AD LA V+ +A G GQ+C+ RL++
Sbjct: 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILT 331
Query: 310 ESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
+ Y+ VL++++ +++ +G P E+ LGP+ + E + IE K++ G+++ GG
Sbjct: 332 QGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNE-GQLVLGG 389
Query: 370 SVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+E EG F+ PT+ E+ P A I +EE+F PVL V++ + F EA+++ N P GL+ +
Sbjct: 390 KRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449
Query: 429 FTRSPENIFK 438
++R E++
Sbjct: 450 YSRKREHLEW 459
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 397 bits (1021), Expect = e-129
Identities = 130/437 (29%), Positives = 215/437 (49%), Gaps = 24/437 (5%)
Query: 18 PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELP 76
+T F+NGK + ++NP ++ + + +A + + + A A W +
Sbjct: 529 GKTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTD 588
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
R E + + A R++L L +E+GK + +V E ID ++ +L
Sbjct: 589 PRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQ 648
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
P + + P GV VI +NFP A+ A A+V GNCVV+K + T +I
Sbjct: 649 PQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSII 708
Query: 197 TIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250
+ +L E VF N PG G+ +G + P ISL++FTGS + GL
Sbjct: 709 GWHLVELFREAGLPEGVF--NFTPGR-------GSVMGDYLVDHPDISLIAFTGSMETGL 759
Query: 251 MVQQTVHQRFG------KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCR 304
+ + + K + E+ G NAIII DDAD+ AV VL++A G GQ+C+ C
Sbjct: 760 RIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACS 819
Query: 305 RLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
R+++ +++Y +++LV + K K+G + +G + ++ K+ ++ E K + G
Sbjct: 820 RVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKRE-GH 878
Query: 365 ILTGGSVIESEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423
+L V EG FV TI+ I P I +EE+F PVL VM+ + F++A++ NS
Sbjct: 879 VLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFA 938
Query: 424 LSSSIFTRSPENIFKWL 440
L+ IF+RSPE++ K
Sbjct: 939 LTGGIFSRSPEHLAKAR 955
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 361 bits (930), Expect = e-121
Identities = 111/420 (26%), Positives = 201/420 (47%), Gaps = 9/420 (2%)
Query: 23 CFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++ G+W G T+ S++PV + + A + + A EA W P +R
Sbjct: 8 HYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRI 67
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
E++ + L+ + L R++ E GK L E EV +++ +V R+ G
Sbjct: 68 ELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGP 127
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
+L P GVV V +NFP + + AL+ GNCVV+K + TP +
Sbjct: 128 LADATAVL-RHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTL 186
Query: 202 KLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261
K + + LP + GG E G A+A + + FTGS++ G ++ +
Sbjct: 187 KA----WIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242
Query: 262 KCL-LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ-TVLDQ 319
K L LE+ GNN +++ + AD+ AV +++ +A +AGQRCT RRLL+ + + +L +
Sbjct: 243 KILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLAR 302
Query: 320 LVDVYKQVKIGDPLEK-GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
LV V +++G E+ +G + + + ++ K E++ +G + L +
Sbjct: 303 LVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAAL 362
Query: 379 VQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+ P I+++S A+ EE F P+L V+++ F A++ N+ GL++ + + S E +
Sbjct: 363 LTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQ 422
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 361 bits (930), Expect = e-121
Identities = 109/423 (25%), Positives = 194/423 (45%), Gaps = 12/423 (2%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
+ G+W ++INP ++ IA +AS+ D + +A +A W PA +
Sbjct: 14 KHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAE 73
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++ + + L E + L E G + E+ ++ + +++G +
Sbjct: 74 RSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRIS 133
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
PS P GVVGVI+ +NFP + + AL GN VV K A TP+
Sbjct: 134 PSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGV 193
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQTV 256
+ + +FE +P + ++ G G+EIG L+SFTGST VG +
Sbjct: 194 ---IPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAIN 250
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
LEL GN +++ DADI A ++ A GQ C + R+++ +++
Sbjct: 251 GGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEF 310
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
L++ V+ K + GDP +GTL+GP+ ++ IE K +G + G EG
Sbjct: 311 LEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEG---PIEG 367
Query: 377 NFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435
V P + +++ +I +EE+F P++ V+K A ++ N+ GLS++++++ +
Sbjct: 368 RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDR 427
Query: 436 IFK 438
+
Sbjct: 428 AAQ 430
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 349 bits (898), Expect = e-117
Identities = 107/425 (25%), Positives = 204/425 (48%), Gaps = 21/425 (4%)
Query: 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
+VNG+WK + P + ++ +V S E+ + + +A W L +R
Sbjct: 7 NYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAA 66
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-- 140
+ ++ D L +G +LS E+ K + EV ++ ++A ++ G V+
Sbjct: 67 YLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGG 126
Query: 141 ---SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
+ + + P+G+V I+ FN+P + G AL+ GN + +K +
Sbjct: 127 SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISG 186
Query: 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQ 254
+ + + F LP +F + G G+EIG I + ++ ++FTGST +G +
Sbjct: 187 LLLAEA----FAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMA 242
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ +LEL G ++ I+++DAD++L ++++ A G +GQRCT +R+L+ ES+
Sbjct: 243 GMR----PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 298
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++++ + + IG+P + + PL +S E I + +G LT +
Sbjct: 299 ELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEI---KR 354
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
EGN + P + +++ + EE F PVL +++ + EEA++I+N GL +SIFT
Sbjct: 355 EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDF 414
Query: 434 ENIFK 438
F
Sbjct: 415 PRAFG 419
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 346 bits (891), Expect = e-115
Identities = 111/428 (25%), Positives = 201/428 (46%), Gaps = 23/428 (5%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
NG+W G +S P + + ++ S E+ + ++ +A KIW P +
Sbjct: 13 NILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHE 72
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R +++ D L E+ +G L+ E+ K IGEV D+ + +LNG +
Sbjct: 73 RVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETL 132
Query: 140 PSER-----PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194
++ + L PLGVV I+ FN+P + ALV GN VV+K A
Sbjct: 133 KGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGS 192
Query: 195 LITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LM 251
L I + + P I G G+ IG + + P I +++FTG T G +
Sbjct: 193 LSGIKMVEA----LADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERIS 248
Query: 252 VQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES 311
+ + +LEL G + I++DDAD+KL ++ A +GQRCT +R+ + +S
Sbjct: 249 EKAKMI----PVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDS 304
Query: 312 IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV 371
+ ++ + ++ +Q+ +G P + + P+ +S + I++ G +L+G
Sbjct: 305 VADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGN-- 361
Query: 372 IESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+ +GN + PT++ +++P + EE F PVL +++ + EA+ ++N GL +SIFT
Sbjct: 362 -KRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFT 420
Query: 431 RSPENIFK 438
+ +
Sbjct: 421 KDTDRAIN 428
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 336 bits (864), Expect = e-112
Identities = 123/418 (29%), Positives = 211/418 (50%), Gaps = 14/418 (3%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
F++GKW + INP + + I + S E+ +E + + ++ LP KR +
Sbjct: 3 FIDGKWIN-REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNI 61
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER 143
+ I ++EK L ++L+I+ GK + + EV+ I A ++ VIPS
Sbjct: 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS-- 119
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203
+ ++ P+G+VG IT FNFP + A+ GN +V + PL+ I + K+
Sbjct: 120 DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKI 179
Query: 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQTVHQRF 260
+ ++ +P ++ G G +G I + +++++SFTGS+KVG + +
Sbjct: 180 IENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGFK--- 236
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
K LEL G N I++ DAD+ AV +++ + AGQ C + +L+ ESI ++
Sbjct: 237 -KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMF 295
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQ 380
V+ K + +G+PL++ T +GPL + E + EK +E +GGK+L GG + +
Sbjct: 296 VNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGG---KRDKALFY 352
Query: 381 PTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
PTI+E+ + K E FAPV+ +++ EE + I NS GL S+IFT K
Sbjct: 353 PTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLK 409
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 335 bits (862), Expect = e-111
Identities = 110/427 (25%), Positives = 193/427 (45%), Gaps = 21/427 (4%)
Query: 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWM-ELPAPKRG 81
++ G+W G + +P++ IA V+ S E+ E + + + ++P +R
Sbjct: 21 SYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERL 80
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
V+R+ D + L +L + GK +GEV+ +D A +++ G IP
Sbjct: 81 AVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPG 140
Query: 142 ERP----NHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
+ L PLGVV IT FN+P + + GN VV K + + PL
Sbjct: 141 DWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPA 200
Query: 198 IAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG--LMVQQT 255
K P + + I D R++ VSFTGST+VG ++
Sbjct: 201 AMAVKA----LLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG 256
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
V + ++EL G + I+++DAD+ LA + AGQRC + +L +Y
Sbjct: 257 VK----QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGK 312
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
+++++ +++GDP + +GPL +P + IE+ +GG++L GG +
Sbjct: 313 LVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRL--G 370
Query: 376 GNFVQPTIVE----ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
+VQPT VE + K E+FAPV ++ + ++A+++ N P GL +++F R
Sbjct: 371 PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGR 430
Query: 432 SPENIFK 438
I +
Sbjct: 431 DVVKIRR 437
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 346 bits (890), Expect = e-110
Identities = 106/403 (26%), Positives = 178/403 (44%), Gaps = 14/403 (3%)
Query: 44 NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLS 103
+ + +A+ + + A W PA R + Q L + H LL
Sbjct: 538 TGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQ 597
Query: 104 IEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPN-HMMLETWNPLGVVGVIT 162
E GK L + + E++E D C + R+L GS P T GV I+
Sbjct: 598 REGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAIS 657
Query: 163 AFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFC 222
+NFP A+ AL+ GN VV K A TP I L +P +
Sbjct: 658 PWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVAL----LHEAGIPKSALYLVT 713
Query: 223 GGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG---KCLLELSGNNAIIIMDDA 279
G IG A+ P I+ V FTGST+V + + + + G + E G NA+I A
Sbjct: 714 GDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATA 773
Query: 280 DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLL 339
+ V+ +A +AGQRC+ R L + E + +++ + +++KIGDP + T +
Sbjct: 774 LPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHV 833
Query: 340 GPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFA 399
GP+ E+++ + I +K++ ++ G EG FV P I E+ A + EE+F
Sbjct: 834 GPVIDVEAKQRLDAHIARMKTE-ARLHFAGPA--PEGCFVAPHIFEL-TEAGQLTEEVFG 889
Query: 400 PVLYVMKFQ--TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440
P+L+V++++ E ++ GL+ + +R ++I +
Sbjct: 890 PILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII 932
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 319 bits (821), Expect = e-105
Identities = 116/421 (27%), Positives = 196/421 (46%), Gaps = 11/421 (2%)
Query: 23 CFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
F+NGKW G T +NP + I T A+ + E+ +A K W + R
Sbjct: 9 SFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDR 68
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGS-VI 139
V+++ L E + +++ E G + + E+++ I + D A+ + +L G +
Sbjct: 69 KAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEV 128
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
PS+ PLGV+ I+ FNFP + + A+ GN VV K T +
Sbjct: 129 PSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGT 188
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
++++ FE LP + EIG + +P L+SFTGST VG + + +
Sbjct: 189 ---IIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGR 245
Query: 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
F + LEL GNN ++ DAD+ AV + +F GQ C R+++H+ +Y ++
Sbjct: 246 AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVE 305
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
+ KQ+ GD + T++GPL + + IE K+ G ++ G + GN
Sbjct: 306 KFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEG---KRVGNV 362
Query: 379 VQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437
+ P + + I + ELFAP+ ++K + +EA+ + N GLSS++FT E
Sbjct: 363 LTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGE 422
Query: 438 K 438
K
Sbjct: 423 K 423
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 312 bits (802), Expect = e-102
Identities = 120/417 (28%), Positives = 187/417 (44%), Gaps = 14/417 (3%)
Query: 22 GCFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+NG+ G NP + + EAS E + ++A A W + R
Sbjct: 25 KLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 84
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVI 139
E + ++ D + E L S GK L E+ ++D+ F G +R LNG
Sbjct: 85 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA 144
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
H + +PLGVV I +N+P + W AL GNCVV K + TPL +
Sbjct: 145 GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204
Query: 200 ITKLVSEVFER---NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ +L ++F N L G G +G + P++ +VS TGS G +
Sbjct: 205 LAELAKDIFPAGVVNILFGR-------GKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ +EL G +I+ DDADI+ V V AGQ CT R+ + IY T+
Sbjct: 258 ASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTL 317
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESE 375
+++L +K G P ++ T LGPL + + K +E K+ G K++TGG +
Sbjct: 318 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGN 377
Query: 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
G + PT++ IV++E+F PV+ V F E+ V N GL+SS++T+
Sbjct: 378 GYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTK 434
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 311 bits (799), Expect = e-101
Identities = 134/432 (31%), Positives = 213/432 (49%), Gaps = 24/432 (5%)
Query: 15 GLSPETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SK 70
L + +++G+W A+ T INP N + I TV E + ED E + A A S
Sbjct: 27 LLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG 86
Query: 71 IWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL 130
W + A RG+ VR I D ++E L RL +++ GK L E ++ ++ ++ + GL
Sbjct: 87 EWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGL 146
Query: 131 SRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190
+ + G +I S P+ P+GVV IT +N+P W AL G +V K +
Sbjct: 147 ADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPS 206
Query: 191 PTTPLITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTG 244
TPL TI + +L+ E N + GA G+E+G ++ + LVSFTG
Sbjct: 207 EITPLTTIRVFELMEEVGFPKGTI--NLILGA-------GSEVGDVMSGHKEVDLVSFTG 257
Query: 245 STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCR 304
+ G + + LEL G N II DDAD +LAV L AGQ C+
Sbjct: 258 GIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGS 317
Query: 305 RLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
R+L+ SI L+D K++K+G+ + T +GP+ + E R E ++ K++G
Sbjct: 318 RILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGAT 377
Query: 365 ILTGGSVIESE----GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS 419
I GG + + G F +PT+ + IV+EE+F PV+ V F+T +EA+++ N
Sbjct: 378 IAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLAND 437
Query: 420 VPQGLSSSIFTR 431
GL+ ++F++
Sbjct: 438 SIYGLAGAVFSK 449
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 309 bits (794), Expect = e-101
Identities = 106/417 (25%), Positives = 181/417 (43%), Gaps = 14/417 (3%)
Query: 22 GCFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+ ++ +NP I + EAS + + A A W + +R
Sbjct: 27 QLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAER 86
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVI 139
+ +I DA+ ++ L ++ GK + E+ +ID F G R L+
Sbjct: 87 SNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAA 146
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
P H + +P+G+VG I +N+P ++ W A+ GN VV+K + TPL +
Sbjct: 147 GEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALK 206
Query: 200 ITKLVSEVFER---NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ +L++++ N + G G +G A+ P++ +VS TG G V
Sbjct: 207 LARLIADILPEGVVNVITGR-------GETVGNALINHPKVGMVSITGDIATGKKVLAAA 259
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ + LEL G +I+ DAD++ V + AGQ CT R+ IY+ +
Sbjct: 260 AKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKL 319
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESE 375
+ L ++ + +GPL + R +E Q +I TGG E
Sbjct: 320 VADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDE 379
Query: 376 GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
G F QPT+V + +IV+ E+F PV+ V +F ++AV N GL+SS++T+
Sbjct: 380 GFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTK 436
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 308 bits (791), Expect = e-101
Identities = 125/426 (29%), Positives = 213/426 (50%), Gaps = 17/426 (3%)
Query: 22 GCFVNGKWKAH--GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
+++G++ + +NP I+ + + ED + + A A W LPA +
Sbjct: 8 PMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIE 67
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R +R+I +RE+ + L+ E GKI EV D D+ +R+ G +I
Sbjct: 68 RASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEII 127
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
S+RP +L LGV I +NFP ++ AL+ GN +V K + TP IA
Sbjct: 128 QSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIA 187
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQ--Q 254
K+V + LP +F G G +GQ +A +P++++VS TGS G +M +
Sbjct: 188 FAKIV----DEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ K LEL G I+MDDAD++LAV++++ + V +GQ C R+ + + IY
Sbjct: 244 NIT----KVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYD 299
Query: 315 TVLDQLVDVYKQVKIGDPLEKG-TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373
+++L + + V+ G+P E+ +GPL + + E+ + +G ++ GG +E
Sbjct: 300 QFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVE 359
Query: 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
+G + PT++ ++ I+ EE F PVL V+ F T E+A+ + N GL+SSI+T++
Sbjct: 360 GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 433 PENIFK 438
K
Sbjct: 420 LNVAMK 425
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 308 bits (791), Expect = e-100
Identities = 121/423 (28%), Positives = 211/423 (49%), Gaps = 22/423 (5%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNN-QKIATVVEASLEDYEEGMKACSEA--SKIWMELP 76
V+GK A G T+ ++P + + + T EAS +D + + A +A + W +
Sbjct: 24 QMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMS 83
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
+R ++ ++ D + + L + S+E+GK + + GE+ D+ +A G +R L G
Sbjct: 84 GAERSRLMFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEG 143
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
+ + + L P+GVVG+IT +NFP + A+ G VV K + T
Sbjct: 144 QTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGT 203
Query: 197 TIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250
+I + +L E VF N + G G GQ +A+DP + +V+FTGS +VG
Sbjct: 204 SIRLAELAREAGIPDGVF--NVVTGY-------GDPAGQVLAEDPNVDMVAFTGSVRVGT 254
Query: 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHE 310
+ + + + LEL G I+ DAD+ A + + AGQ C + RLL+ E
Sbjct: 255 KLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQE 314
Query: 311 SIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS 370
I ++++L+D+ ++V GDPL + T +G + + + + + G ++L GG
Sbjct: 315 GIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGE 374
Query: 371 VIESE-GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
I E G + PT+ ++P I +EE+F PVL + F+T +EAV + N+ GLS+S+
Sbjct: 375 RIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASV 434
Query: 429 FTR 431
++
Sbjct: 435 WST 437
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 303 bits (779), Expect = 9e-99
Identities = 128/432 (29%), Positives = 197/432 (45%), Gaps = 28/432 (6%)
Query: 19 ETPGCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-----SKI 71
T F+NG WK + INP I + A+ ED + + A A
Sbjct: 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGAD 65
Query: 72 WMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS 131
W R +R I + EK L +L SI+ GK L E ++ +V ++ L+
Sbjct: 66 WATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLA 125
Query: 132 RQLNGSV---IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWK 188
+L+ + P+GVVG+IT +N+P + W AL G + K
Sbjct: 126 EKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILK 185
Query: 189 GAPTTPLITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSF 242
+ L + + ++ E V N L G G E G +A P + V+F
Sbjct: 186 PSELASLTCLELGEICKEVGLPPGVL--NILTGL-------GPEAGAPLATHPDVDKVAF 236
Query: 243 TGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTT 302
TGS+ G + Q LEL G + +++ +D D+ A +F T GQ C+
Sbjct: 237 TGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSA 296
Query: 303 CRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQG 362
RL++HESI L+++V K +KI DPLE+G LGP+ + + K + N KS+G
Sbjct: 297 TSRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEG 356
Query: 363 GKILTGGSVIE--SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS 419
ILTGGS E +G F++PTI +++ I +EE+F PVL V F T EEA+ + N
Sbjct: 357 ATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLAND 416
Query: 420 VPQGLSSSIFTR 431
GL +++ +
Sbjct: 417 TVYGLGAAVISN 428
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 302 bits (777), Expect = 2e-98
Identities = 113/423 (26%), Positives = 188/423 (44%), Gaps = 15/423 (3%)
Query: 19 ETPGCFVNGKWK--AHGPTVSS-INPVNNQKIATVVEASLEDYEEGMKACSEASKIWMEL 75
+ G+ G T P + + +V E+ ++ +++ A W ++
Sbjct: 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKM 77
Query: 76 PAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN 135
+R V+ + +RE+ ++ +L I GK + E ++ ++ GL+ L+
Sbjct: 78 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLS 137
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
G I PLGV I A+N+P + W AL CGN VV+K +P TP+
Sbjct: 138 GQHIQL-PGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPV 196
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+ + ++ E +P + GGAE G + P ++ VSFTGS G V +
Sbjct: 197 TGVILAEIFHEA----GVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252
Query: 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ LEL G + ++I D +++ AVR L A T GQ CT R+ + I
Sbjct: 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQ 312
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
L+++V K + +GDPL T +G L + + K +G ++L GG +
Sbjct: 313 FLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPS 372
Query: 376 ------GNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
G F+ P + VKEE+F PV+ V+ F T EE ++ N+ GL+S +
Sbjct: 373 DPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGV 432
Query: 429 FTR 431
FTR
Sbjct: 433 FTR 435
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 295 bits (758), Expect = 3e-95
Identities = 90/450 (20%), Positives = 159/450 (35%), Gaps = 38/450 (8%)
Query: 18 PETPGCFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELP 76
E V G+W G ++ +PV + V L+ A + L
Sbjct: 5 TELLKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALT 64
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
+R + I L+ K + + G + ++ I + L L
Sbjct: 65 YAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGE 124
Query: 137 SVIPSERPNHMMLETWN---------PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVW 187
+ + + + GV I AFNFP L A AL+ G V+
Sbjct: 125 VHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIV 184
Query: 188 KGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTK 247
K A T +T +V++V + LP + CG + + + +VSFTGS
Sbjct: 185 KPATATAWLTQR---MVADVVDAGILPPGALSIICGSS--AGLLDQIRSFDVVSFTGSAD 239
Query: 248 VG--LMVQQTVHQRFGKCLLELSGNNAIIIMDDADIK-----LAVRSVLFAAVGTAGQRC 300
L QR + ++ N+ I+ DA L ++ V+ +GQ+C
Sbjct: 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKC 299
Query: 301 TTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKS 360
T RR + E+ + VL+ L ++ +G+P +G L + E +N GI ++
Sbjct: 300 TAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALRE 359
Query: 361 QGGKILTGGSVIESE-----GNFVQPTIVEIS-PTAD--IVKEELFAPVLYVMKFQTF-- 410
+ +V + V P + ++ P + E+F PV V ++
Sbjct: 360 EAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD 419
Query: 411 ------EEAVKINNSVPQGLSSSIFTRSPE 434
AV + L +SI++
Sbjct: 420 TNALPEAHAVALARRGQGSLVASIYSNDDA 449
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 294 bits (756), Expect = 4e-95
Identities = 119/419 (28%), Positives = 197/419 (47%), Gaps = 16/419 (3%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
F++G + G SI P + IA + A+ E + + A K W +
Sbjct: 16 SHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMA 75
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSR-QLNGS 137
RG ++++ D +RE+ L L +++ GK + E + + D +F G++ LNG
Sbjct: 76 RGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGD 135
Query: 138 VIPSERPNHMML-ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
IP PLGV I A+N+P + W A ALV GN +V+K + TPL
Sbjct: 136 YIPLGGDFAYTKRV---PLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLG 192
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ I +++ E LP +F G + G + P ++ VS TGS G V
Sbjct: 193 ALKIAEILIEA----GLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+EL G + +I+ DDADI+ AV + ++GQ C+ R+ + +
Sbjct: 249 AGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARF 308
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--- 373
L+ L + + +GDPL+ T LGPL + ++ IE K++G ++TGG +
Sbjct: 309 LENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVA 368
Query: 374 SEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
EG +VQPT+ +++ I +EE+F PV+ V+ F +E + N+ GL+ +FT
Sbjct: 369 GEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTA 427
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 294 bits (755), Expect = 5e-95
Identities = 111/427 (25%), Positives = 196/427 (45%), Gaps = 27/427 (6%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
F+ G++ G T S++P N+ + + + KA EA + W A +
Sbjct: 28 LHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKE 87
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLS-RQLNGSV 138
R + +I + + + L + ++ G++L +V + F + +
Sbjct: 88 RKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRT 147
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
P + + + P G VG+IT +N P + W AL GN VV K A +P
Sbjct: 148 FPVD-RDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206
Query: 199 AITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMV 252
+ +++ E VF N + G G E G A+ P + L++ TG T+ G +V
Sbjct: 207 KLAEILKEADLPPGVF--NLVQGF-------GEEAGAALVAHPLVPLLTLTGETETGKIV 257
Query: 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI 312
+ + EL G + ++ DAD++ A+ +V+F G+RCT RLL+ E I
Sbjct: 258 MRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKI 317
Query: 313 YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI 372
++ + ++V+ + +++G PL+ T +GPL PE + +E K +G ++L GG
Sbjct: 318 FEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERA 377
Query: 373 E--------SEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGL 424
+ S GN++ PT+ I +EE+F PVL + F+ EEA++ N GL
Sbjct: 378 KTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGL 437
Query: 425 SSSIFTR 431
++ +FTR
Sbjct: 438 AAYVFTR 444
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 291 bits (748), Expect = 3e-94
Identities = 126/424 (29%), Positives = 201/424 (47%), Gaps = 24/424 (5%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELP 76
F+N +W G NP +K+ V E ED ++ +KA +A +I W +
Sbjct: 22 KIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMD 81
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLN 135
A +RG ++ ++ D + L + ++ GK+ + ++ I + G + ++
Sbjct: 82 ASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQ 141
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
G IP + N P+GV G I +NFP + W AL CGN VV K A TPL
Sbjct: 142 GRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPL 200
Query: 196 ITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
+ + L+ E V N +PG G G AI+ + V+FTGST+VG
Sbjct: 201 TALHMGSLIKEAGFPPGVV--NIVPGY-------GPTAGAAISSHMDVDKVAFTGSTEVG 251
Query: 250 LMVQQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
++++ + + LEL G + I+ DAD+ AV GQ C RL +
Sbjct: 252 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFV 311
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368
ESIY + + V+ K+ +G+PL G GP E + IE+ K +G K+ G
Sbjct: 312 EESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECG 371
Query: 369 GSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
G ++G F+QPT+ +++ I KEE+F PV +MKF++ ++ +K N+ GLS+
Sbjct: 372 GGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAG 431
Query: 428 IFTR 431
IFT
Sbjct: 432 IFTN 435
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 289 bits (742), Expect = 9e-94
Identities = 107/407 (26%), Positives = 187/407 (45%), Gaps = 6/407 (1%)
Query: 33 GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALR 92
S+NP Q +A + A+ ++ E + + K W +R + +R IG ALR
Sbjct: 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALR 65
Query: 93 EKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETW 152
+ + ++ EMGK + + EV + +CD+ + P+ N + +
Sbjct: 66 AHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNP-EPTLVENQQAVIEY 124
Query: 153 NPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK 212
PLGV+ I +NFP + A L+ GN + K AP I ++
Sbjct: 125 RPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARI----LAEAG 180
Query: 213 LPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
P ++ E + DPRI+ V+ TGS + G + KC+LEL G++
Sbjct: 181 TPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDP 240
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I+++DAD++LAV++ + GQ C +R ++ E I Q D+ V +K+GDP
Sbjct: 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDP 300
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTAD 391
L + LGP+ + R + ++ ++G ++L GG I EGN+ T++ +++P
Sbjct: 301 LVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMT 360
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
++ELF PV + + A+ + N GLS++IFT +
Sbjct: 361 AFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAE 407
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 289 bits (743), Expect = 1e-93
Identities = 103/407 (25%), Positives = 188/407 (46%), Gaps = 8/407 (1%)
Query: 34 PTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALRE 93
S+NP N+ A+ + + +E + K W R E++ I +AL+E
Sbjct: 4 SKYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKE 63
Query: 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWN 153
L +++++EMGK+L E EV+ + +C++ ++ + +
Sbjct: 64 HEDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYY-LKQ 122
Query: 154 PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213
GV+ +NFP + + GN ++ K A P K+ +R
Sbjct: 123 STGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKI----IKRAGA 178
Query: 214 PGAIFTS-FCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNA 272
P + + ++ IA DPRI V+ TGS + G V + + K +EL GN+A
Sbjct: 179 PEGSLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDA 237
Query: 273 IIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332
I++DDAD ++ + A GQ CT+ +R+++ +S Y VL +L +V+ +K GDP
Sbjct: 238 FIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDP 297
Query: 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTAD 391
LE T L P+++ ++++ E ++ G K+ I+S+G F +PTI+ +I+
Sbjct: 298 LEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNP 357
Query: 392 IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
+ +E+F P+ V + A+++ N GL SS+ + K
Sbjct: 358 VFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKK 404
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 290 bits (744), Expect = 1e-93
Identities = 125/424 (29%), Positives = 196/424 (46%), Gaps = 24/424 (5%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELP 76
F+N +W T ++NP + I V E ED ++ +KA A ++ W +
Sbjct: 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 77 APKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLN 135
A RG ++ ++ D + +L L +++ GK + ++ V+ + G + + +
Sbjct: 81 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 136 GSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPL 195
G IP + + P+GV G I +NFP + W AL GN VV K A TPL
Sbjct: 141 GKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPL 199
Query: 196 ITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVG 249
+ + L+ E V N +PG G G AIA + V+FTGST++G
Sbjct: 200 TALYVANLIKEAGFPPGVV--NIVPGF-------GPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 250 LMVQQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
++Q + LEL G + IIM DAD+ AV FA GQ R +
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFV 310
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368
E IY +++ V K +G+P + T GP K I K +G K+L G
Sbjct: 311 QEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCG 370
Query: 369 GSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSS 427
G + G F+QPT+ ++ I KEE+F PV+ ++KF+T EE V N+ GL+++
Sbjct: 371 GGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAA 430
Query: 428 IFTR 431
+FT+
Sbjct: 431 VFTK 434
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 288 bits (739), Expect = 8e-93
Identities = 114/421 (27%), Positives = 194/421 (46%), Gaps = 17/421 (4%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA--SKIWMELPAPK 79
F+ GKW + + P + + V A+ D + + A A + W P +
Sbjct: 12 FIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHE 71
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSV 138
R V+ L E+ +LL+ E G+ + ++ G + ++ +
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE 131
Query: 139 IPSERPNHMML--ETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
+ ++ E P+GVVG I A+N P + AL+ G +V K A TPL
Sbjct: 132 TRTGSYGQSIVSRE---PVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLT 188
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
A+ ++ +EV LP + + GG E GQA+ +P I + +FTGS+ VG V +
Sbjct: 189 ANALAEVFAEV----GLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
+ C LEL G +A II++D D+ A+ ++F+ V AGQ C R+L S Y +
Sbjct: 245 AEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--S 374
+ + + + +G P + +GPL + + R E I +G +++ GG E
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLD 364
Query: 375 EGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
G F+QPT+ ++ I +EE+F PVL ++ + T E+A+ I N GL+ S++T
Sbjct: 365 NGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDV 424
Query: 434 E 434
Sbjct: 425 P 425
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 288 bits (739), Expect = 1e-92
Identities = 115/450 (25%), Positives = 209/450 (46%), Gaps = 28/450 (6%)
Query: 1 MEFAKQEYEFLSEIGLSPETP-GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLED 57
Y + L+ + P F+ G++ T ++INP + I V A + D
Sbjct: 16 ESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSD 75
Query: 58 YEEGMKACSEA--SKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-I 114
++ + A EA + +W ++ A RG ++ ++ D + + L + +++ G +
Sbjct: 76 VDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALK 135
Query: 115 GEVQEVIDMCDFAVGLSRQLNGSVIP---SERPNHMMLETWNPLGVVGVITAFNFPCAVL 171
V I + G ++ G+ IP + ++ L P+GV G++ +N+P +L
Sbjct: 136 THVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMML 195
Query: 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE------VFERNKLPGAIFTSFCGGA 225
W L GN VV K A TPL + +L + V N LPG+ G+
Sbjct: 196 SWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVV--NILPGS-------GS 246
Query: 226 EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLA 284
+GQ ++ P + + FTGST+VG + ++ K LEL G + +II D D+ A
Sbjct: 247 LVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKA 306
Query: 285 VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHT 344
V+ + + G+ C RL + ESI+ + ++V+ +++KIG+PLE+ T GP +
Sbjct: 307 VQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNH 366
Query: 345 PESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTI-VEISPTADIVKEELFAPVLY 403
+ + + +G ++ GG+ + G F QPT+ ++ I KEE F P++
Sbjct: 367 EAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMI 426
Query: 404 VMKFQ--TFEEAVKINNSVPQGLSSSIFTR 431
+ +F + + N+ GL+S +FTR
Sbjct: 427 ISRFADGDVDAVLSRANATEFGLASGVFTR 456
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 284 bits (730), Expect = 2e-91
Identities = 117/429 (27%), Positives = 200/429 (46%), Gaps = 20/429 (4%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
F+ G++ T+ ++P + I + D E ++ A K W +L A
Sbjct: 14 VNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTART 73
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++R + +RE H L +L E GK+L EV D+ + + G ++
Sbjct: 74 RQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDIL 133
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
PS+ + + P GVV ITA+NFP A+ G AL+ GN +V K TPL T
Sbjct: 134 PSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTE 193
Query: 200 ITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVG--LMVQ--Q 254
+ ++ + LP + G G+ +GQ + + P +++ TGST G + +
Sbjct: 194 LGRI----AKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAE 249
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ +LEL G +++MDDAD+ A L+ GQ CT RL +H S+Y
Sbjct: 250 YMT----PVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYD 305
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+ + + + K +K+GDP++ + +GP N + + QG + TGG
Sbjct: 306 EFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATV 365
Query: 375 E----GNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIF 429
E G + +PT++ ++ +V EE F P+L ++K + E+A++ N GLS+ +
Sbjct: 366 EGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVH 425
Query: 430 TRSPENIFK 438
T+S NI +
Sbjct: 426 TQSFANINQ 434
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 283 bits (726), Expect = 5e-91
Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 24/430 (5%)
Query: 22 GCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
FV G+W T +P + + V + + + ++A EA W E+ A +R
Sbjct: 14 DSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERS 73
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQ---EVIDMCDFAVGLSRQLNGSV 138
++R+ + + + L R+++ E GK L E GE+ ++ F+ +R++ G +
Sbjct: 74 SLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEW--FS-EEARRVYGDI 130
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
I + + L P+GV VIT +NFP A++ AL G VV K A TP +
Sbjct: 131 IHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSAL 190
Query: 199 AITKLVSEVFERNKLPGAIF----TSFCGGAEIGQAIAKDPRISLVSFTGSTKVG--LMV 252
A+ +L + +P ++ S E+G+AI DP +S +SFTGST G L+
Sbjct: 191 ALAEL----ASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 253 Q--QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHE 310
+V + +EL G I+ D A++ AV + + GQ C + L+
Sbjct: 247 HAANSVK----RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQR 302
Query: 311 SIYQTVLDQLVD-VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGG 369
I+ + + + K +++G+ E+GT GPL ++ + EK + + S+G ++TGG
Sbjct: 303 GIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGG 362
Query: 370 SVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428
+ NF +PT++ ++ EE F P+ V+KF T EEA+ I N+ GL+
Sbjct: 363 KRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYF 422
Query: 429 FTRSPENIFK 438
+++ P I++
Sbjct: 423 YSQDPAQIWR 432
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 278 bits (713), Expect = 4e-89
Identities = 122/425 (28%), Positives = 205/425 (48%), Gaps = 16/425 (3%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
+NG+W +G + NP N K+ +V + ++ + A + A W L A +
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKE 70
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++R + + E L RL+++E GK L E GE+ ++ +++ G I
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTI 130
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
P + + ++ P+GV IT +NFP A++ A AL G +V K A TP +A
Sbjct: 131 PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 190
Query: 200 ITKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG--LMVQ--Q 254
+ +L R +P +F G A +G + +P + +SFTGST++G LM Q +
Sbjct: 191 LAEL----AIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK 246
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ K LEL GN I+ DDAD+ AV L + AGQ C RL + + +Y
Sbjct: 247 DIK----KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYD 302
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
++L ++ IGD L+ G +GPL ++ E+ I + +G +++ GG E
Sbjct: 303 RFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHER 362
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
GNF QPTI+ ++ A + KEE F P+ + +F+ + + N GL++ + R
Sbjct: 363 GGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDL 422
Query: 434 ENIFK 438
+F+
Sbjct: 423 SRVFR 427
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 278 bits (713), Expect = 4e-89
Identities = 121/432 (28%), Positives = 197/432 (45%), Gaps = 30/432 (6%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
++ G+W+ T +P + + TV + + ++A A W A +
Sbjct: 14 QAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKE 73
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL-------SR 132
R ++R+ D + L +L+ E GK L E GE+ +A +
Sbjct: 74 RAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEI-------AYAASFIEWFAEEGK 126
Query: 133 QLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 192
++ G +P+ N ++ P+GV IT +NFP A++ AL G +V K A +
Sbjct: 127 RVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAES 186
Query: 193 TPLITIAITKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG-- 249
TP +A+ L ER +P + + G IG I +P + +SFTGST VG
Sbjct: 187 TPFSALAMAFL----AERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRL 242
Query: 250 LMVQ--QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLL 307
LM Q TV K LEL GN I+ DDAD+ AV + + GQ C R
Sbjct: 243 LMAQSAPTVK----KLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFF 298
Query: 308 IHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILT 367
+HE +Y D+L ++K+G E G LGPL + K E I + ++G ++T
Sbjct: 299 VHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMT 358
Query: 368 GGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
GG F +PT++ + P D+ KEE F P+ + +F + EE V++ N GL++
Sbjct: 359 GGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAA 418
Query: 427 SIFTRSPENIFK 438
+++R +++
Sbjct: 419 YLYSRDIGRVWR 430
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 278 bits (714), Expect = 2e-88
Identities = 108/447 (24%), Positives = 185/447 (41%), Gaps = 31/447 (6%)
Query: 11 LSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEAS 69
L ++ E C V + ++P N K+A A + A A
Sbjct: 54 LKDLKGQTEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAAR 113
Query: 70 KIWMELPAPKRGEVVRQIGDALREK-LHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFA 127
K W P R +V + D L + + GK + + I E+ID F
Sbjct: 114 KEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFN 173
Query: 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVW 187
+ +L G S P+ G V I+ FNF A+ G A + GN V+W
Sbjct: 174 AKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFT-AIGGNLAGAPALMGNVVLW 232
Query: 188 KGAPTTPLITIAITKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVS 241
K + T L + A+ +++ E + +P G G + + ++
Sbjct: 233 KPSDTAMLASYAVYRILREAGLPPNII--QFVPAD-------GPTFGDTVTSSEHLCGIN 283
Query: 242 FTGSTKVGLMVQQTVHQRFGKC------LLELSGNNAIIIMDDADIKLAVRSVLFAAVGT 295
FTGS + + V Q + E G N + AD+ V L +A
Sbjct: 284 FTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEY 343
Query: 296 AGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEK-GTLLGPLHTPESRKNFEKG 354
GQ+C+ C RL + +S++ + +L++ + ++K+GDP E GT + ++ +K
Sbjct: 344 GGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKW 403
Query: 355 IENIKSQGG-KILTGGSVIESEGNFVQPTIVEI-SPTADIVKEELFAPVLYVMKF--QTF 410
+E+ +S IL GG ES G +V+P I+E P I+KEE+F PVL V + +
Sbjct: 404 LEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKY 463
Query: 411 EEAVK-INNSVPQGLSSSIFTRSPENI 436
E +K ++++ GL+ ++F + +
Sbjct: 464 RETLKLVDSTTSYGLTGAVFAQDKAIV 490
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 275 bits (705), Expect = 1e-87
Identities = 123/425 (28%), Positives = 204/425 (48%), Gaps = 18/425 (4%)
Query: 22 GCFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPK 79
C VNG+W A G T+ NP + I TV S+ +E + A ++A W A +
Sbjct: 34 QCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKE 93
Query: 80 RGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI 139
R ++R+ D + + +++ E GK L E GEV ++ ++++ G I
Sbjct: 94 RAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTI 153
Query: 140 PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199
P+ + + P+GV IT +NFP A++ A AL G ++ + A TPL +A
Sbjct: 154 PAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALA 213
Query: 200 ITKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG--LMVQ--Q 254
+ L E+ +P + G A EIG + + + +SFTGST+VG LM Q
Sbjct: 214 LGVL----AEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP 269
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
T+ + LEL GN I+ DDAD+ AV + + AGQ C R+ + +Y
Sbjct: 270 TIK----RISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYD 325
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
++L K++K+G+ E G ++GP+ ++ + IE+ S+G K++TGG E
Sbjct: 326 KFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGK--EL 383
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
G F +P I+ ++ + KEE F P+ + F T EE + N GL++ +T +
Sbjct: 384 GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENF 443
Query: 434 ENIFK 438
+
Sbjct: 444 SRAIR 448
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 274 bits (704), Expect = 1e-87
Identities = 121/432 (28%), Positives = 194/432 (44%), Gaps = 31/432 (7%)
Query: 23 CFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
++ G+WK A G T NP IA V ED ++A A ++ P R
Sbjct: 14 GYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETR 73
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL-------SRQ 133
+ + I D L+E +GR+L +E GK E GEV D+A G
Sbjct: 74 RKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEV-------DYAAGFFDYCAKHISA 126
Query: 134 LNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTT 193
L+ IP + + + P+GV G+I +NFP ++ AL G V K A T
Sbjct: 127 LDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASET 186
Query: 194 PLITIAITKLVSEVFERNKLPGAIFTSFCGGA-EIGQAIAKDPRISLVSFTGSTKVG--L 250
PL IA + ++ LP + G A IG+ + + + ++SFTGST+VG L
Sbjct: 187 PLTMIAFFSV----MDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKL 242
Query: 251 MVQ--QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLI 308
+V + V K LEL GN I+ DDAD++ A +++ GQ C R+ +
Sbjct: 243 IVDTAEQVK----KLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFV 298
Query: 309 HESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTG 368
HE + +L + ++ +GD + G +GPL + ++ +++ +G ++ G
Sbjct: 299 HEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAG 358
Query: 369 GSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSS 426
E +G F PT+V + +EE F P++ + F+T EE + N GL+S
Sbjct: 359 KQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLAS 418
Query: 427 SIFTRSPENIFK 438
+FT E +
Sbjct: 419 YVFTADAERAQR 430
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 272 bits (699), Expect = 7e-87
Identities = 103/424 (24%), Positives = 196/424 (46%), Gaps = 24/424 (5%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG W P + I+P + A + S D ++ + A +A + W +R
Sbjct: 29 YINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERL 88
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
V +I + ++ + + +S+EMG + + + ++ +
Sbjct: 89 GFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL 148
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
E +L ++ +GVVG+IT +N+P + AL+ G +V K + PL +
Sbjct: 149 IEGNEQAIL-HYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLF 207
Query: 201 TKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
+++ E VF N + G GA +G ++ P + ++SFTGST+ G + +
Sbjct: 208 AEILDEAALPSGVF--NLINGD-------GANVGSYLSAHPDLEMISFTGSTRAGKDISK 258
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ LEL G A II DADI A++ + +GQ C R+L+ ++IY
Sbjct: 259 NASNTLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYD 317
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-- 372
+ D+ ++ ++G + G +GP+ + E + I++ +G ++TGG+ +
Sbjct: 318 KAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPM 377
Query: 373 -ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
G +V+PT+ ++ P I +EE+F PVL ++ F T +EAV + N GL++ I +
Sbjct: 378 GMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQS 437
Query: 431 RSPE 434
+
Sbjct: 438 QDRS 441
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 272 bits (697), Expect = 8e-87
Identities = 103/424 (24%), Positives = 193/424 (45%), Gaps = 27/424 (6%)
Query: 24 FVNGKW-KAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG+W +++ T+ INP + I V + + D ++ ++A + + +R
Sbjct: 11 YINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQ 70
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPE-GIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
++ +I + + + ++ E+G L Q ++ A
Sbjct: 71 ALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERR 130
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
+ + ++ E +GV G+IT +NFP A G+ VV K + TP + +
Sbjct: 131 GD--DLVVKE---AIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVIL 185
Query: 201 TKLVSE------VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254
++ + VF N + G GA +G +++ P++ ++SFTGS G + +
Sbjct: 186 AEIFDKVGVPKGVF--NLVNGD-------GAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236
Query: 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
+ F K LEL G + I++DD DIK A ++ V GQ CT R+L+ I
Sbjct: 237 KAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKD 296
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-- 372
L +L + + QV++G+P E GT +GP+ + + + I +G ++ GG
Sbjct: 297 AFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPE 356
Query: 373 -ESEGNFVQPTI-VEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430
+G F +PTI + + I +EE+F PV+ V+ + +EA++I N GL+ +
Sbjct: 357 GLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIG 416
Query: 431 RSPE 434
+ E
Sbjct: 417 KDKE 420
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 264 bits (677), Expect = 9e-84
Identities = 122/417 (29%), Positives = 208/417 (49%), Gaps = 16/417 (3%)
Query: 24 FVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
++NG+W +NP + + V ++ ED + + +EA K W ++ P+R
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRA 68
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
++ L + L L++IE GK E +GEV I+ +FA G + G + S
Sbjct: 69 RILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLAS 128
Query: 142 ERPNHMMLETWN---PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ +E N P+GVVG I FNFP V W +A+ GN + K + TPL+T
Sbjct: 129 IATD---VEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTE 185
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+ +L + LP +F G ++ I + P I +SF GS VG V + +
Sbjct: 186 KLVELFEKA----GLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE 241
Query: 259 RFGKCLLELSG-NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
K + L+G N I+++DA+++ V +++ AA G+AG+RC C + + E I +
Sbjct: 242 N-LKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFM 300
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE-G 376
+L + +KIG+ L+ G LGP+ +++K IE +G +++ G S+ G
Sbjct: 301 AKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDG 360
Query: 377 NFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
FV PTI + ++ I K+E+FAPVL V++ + +EA++I N + +FT +
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSN 417
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 261 bits (669), Expect = 3e-82
Identities = 73/422 (17%), Positives = 134/422 (31%), Gaps = 32/422 (7%)
Query: 33 GPTVSSINPVNNQKIATVV-EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDAL 91
+ N + + + + + A ++ ++ + L KR ++R I L
Sbjct: 6 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASEL 65
Query: 92 REKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGS--------VIPSER 143
+ + +E GE+ + + + +
Sbjct: 66 EARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPL 125
Query: 144 PNHMMLETWNPLGVVGVITAFNFPCA--VLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
P + LG V V A NFP A G + AL G V+ KG P + +
Sbjct: 126 PKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVA 185
Query: 202 KLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+ + + ++ +LP AIFT G +GQA+ P I V FTGS G + H+R
Sbjct: 186 ECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 245
Query: 261 GK--CLLELSGNNAIIIMDDADIKLA--VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTV 316
EL N I A A + + GQ CT + +
Sbjct: 246 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA 305
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG 376
+ + TLL P + + G + + E
Sbjct: 306 FIETA-----QSLIRQQSPSTLLTPGI---RDSYQSQVVSRGSDDGIDVTFSQA----ES 353
Query: 377 NFVQPTIVEISPTA----DIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432
V + S +EE+F P ++ + + + ++ + L+++I
Sbjct: 354 PCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATE 413
Query: 433 PE 434
+
Sbjct: 414 ED 415
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 255 bits (653), Expect = 9e-80
Identities = 113/421 (26%), Positives = 193/421 (45%), Gaps = 20/421 (4%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
F++GK A G + NP + TV AS D +++ A W +R
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA 89
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS 141
V + L + ++ L +LS E GK + + G++ +++C+F +G+
Sbjct: 90 RVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEG 149
Query: 142 ERPNHMMLETWN---PLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
P ++ ++ P+G+ IT FNFP + W A+ CGN + K + P + I
Sbjct: 150 AGPG---IDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPI 206
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
+ +L+ E LP I G AI P I+ VSF GST + V T
Sbjct: 207 RLAELMIEA----GLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM 262
Query: 259 RFGKCLLELSG-NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRL-LIHESIYQTV 316
GK G N +IIM DAD+ A +++ A G+AG+RC + E +
Sbjct: 263 N-GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRL 321
Query: 317 LDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--- 373
+D+LV + + ++IG ++ +GP+ T E+ + I++ QG K++ G +
Sbjct: 322 IDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQG 381
Query: 374 -SEGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR 431
G+F+ + + ++P DI K E+F PVL V++ + +EEA+ + G +I+TR
Sbjct: 382 YENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTR 441
Query: 432 S 432
Sbjct: 442 D 442
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 251 bits (643), Expect = 3e-78
Identities = 84/434 (19%), Positives = 138/434 (31%), Gaps = 37/434 (8%)
Query: 23 CFVNGKWKAHGPTVSSINPVNNQKIAT-VVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
V G+W T +S A ++E +A EA + +R
Sbjct: 32 HLVAGEWLDGAGTFASAPAHG---PAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERA 88
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLN------ 135
+R I D + + + + S E G GE + +
Sbjct: 89 AFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRV 148
Query: 136 GSVIPSERP--NHMMLETWNPLGVVGVITAFNFPCA--VLGWNACIALVCGNCVVWKGAP 191
+ +P +P + P+G V V A NFP A G + AL G VV KG
Sbjct: 149 DAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHS 208
Query: 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGL 250
P + + V + + +F+ G ++G A+ + P I V FTGS G
Sbjct: 209 AHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGR 268
Query: 251 MVQQTVHQRFGK--CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGT---AGQRCTTCRR 305
+ R EL N + ++ +A A A AGQ CT
Sbjct: 269 ALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGI 328
Query: 306 LLIHESI-YQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364
++ E V+ +V L G K
Sbjct: 329 AVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARF---------ATRNAVK 379
Query: 365 ILTGGSVIESEGNFVQPTIVEISPTA----DIVKEELFAPVLYVMKFQTFEEAVKINNSV 420
L ES G P + E + + EE+F P+ V++ + E ++
Sbjct: 380 PLLAT---ESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGF 436
Query: 421 PQGLSSSIFTRSPE 434
L+++I + +
Sbjct: 437 QGQLTATIHMDAGD 450
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 233 bits (597), Expect = 3e-72
Identities = 63/395 (15%), Positives = 141/395 (35%), Gaps = 25/395 (6%)
Query: 53 ASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPE 112
S+++ +++ ++A K + + +V+ I DA L ++ E G + +
Sbjct: 9 RSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQ 68
Query: 113 GIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLG 172
+V + + + + + E ++E PLGVV + P + +
Sbjct: 69 D--KVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVI 126
Query: 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAI 231
+ I++ GN +V+ P + +++SE E+ P + + +
Sbjct: 127 YKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQL 186
Query: 232 AKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFA 291
K +++ TG + + + + GN I A+I AV+ +L +
Sbjct: 187 MKHKDTAVILATGGSAMVKAAYSSGT----PAIGVGPGNGPAFIERSANIPRAVKHILDS 242
Query: 292 AVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351
G C + + +++ + V+ + E L + P N
Sbjct: 243 KTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDA--EAVQLGKFILRPNGSMNP 300
Query: 352 E---KGIENIKSQ-GGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKF 407
K +++I + G + V+ +E V E AP+L
Sbjct: 301 AIVGKSVQHIANLAGLTVPADARVLIAEETKVGA--------KIPYSREKLAPILAFYTA 352
Query: 408 QTFEEAVKINNSVPQ----GLSSSIFTRSPENIFK 438
+T++EA +++ + G + I + E I +
Sbjct: 353 ETWQEACELSMDILYHEGAGHTLIIHSEDKEIIRE 387
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 230 bits (589), Expect = 4e-71
Identities = 65/394 (16%), Positives = 130/394 (32%), Gaps = 17/394 (4%)
Query: 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKI 109
+ ++ + + + +A + + + ++ R A + L + E G
Sbjct: 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMG 60
Query: 110 LPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCA 169
+ E + Q G I E N + P+G++ I P +
Sbjct: 61 IVEDKVIKNHFASEFIYNKYKDEQTCG--ILEEDDNLGTMTIAEPVGIICGIVPTTNPTS 118
Query: 170 VLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIG 228
+ + I+L N +++ P T KLV + P I E+
Sbjct: 119 TAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELS 178
Query: 229 QAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSV 288
A+ K I+L+ TG + + + +GN ++I + ADIK AV SV
Sbjct: 179 NALMKHDDIALILATGGPGMVKAAYSSGK----PAIGVGAGNVPVVIDETADIKRAVASV 234
Query: 289 LFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESR 348
L + G C + + +++ + +Y V ++ V +K L
Sbjct: 235 LMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADK-VRKVLLIDGALN 293
Query: 349 KNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQ 408
+ G + ++ + + D E +P L + +
Sbjct: 294 AKIVG-----QPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRAD 348
Query: 409 TFEEAV----KINNSVPQGLSSSIFTRSPENIFK 438
FE+AV + G +S ++T N +
Sbjct: 349 NFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADR 382
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 2e-34
Identities = 67/301 (22%), Positives = 136/301 (45%), Gaps = 40/301 (13%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-----ALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
PLGVV VI +N+P +N I A+ GN VV K + + + + ++ +
Sbjct: 120 PLGVVLVIGTWNYP-----FNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDP--RISLVSFTGSTKVGLMVQQTVHQRFGKCLLE 266
+++ ++ GG + K+ I +TGST VG ++ + LE
Sbjct: 175 DKD-----LYPVINGGVPETTELLKERFDHIL---YTGSTGVGKIIMTAAAKHLTPVTLE 226
Query: 267 LSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326
L G + + + D+ +A R + + +GQ C +L SI ++++L K+
Sbjct: 227 LGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKE 286
Query: 327 VKIGDPLEKGTLLGPLHTPESR----KNFEKGIENIKS--QGGKILTGGSVIESEGNFVQ 380
D + R ++F++ + +G K+ GG+ + ++
Sbjct: 287 FYGEDAKKSRDY--------GRIISARHFQR----VMGLIEGQKVAYGGTGDAAT-RYIA 333
Query: 381 PTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKW 439
PTI+ ++ P + +++EE+F PVL ++ ++ EEA++ N + L+ +F+ + + I K
Sbjct: 334 PTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKM 393
Query: 440 L 440
+
Sbjct: 394 I 394
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 4e-33
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 39/300 (13%)
Query: 154 PLGVVGVITAFNFPCAVLGWNACI-----ALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208
P GV +I FN+P N + A++ GN + K + TTP + I K+++E F
Sbjct: 130 PYGVTYIIGPFNYP-----VNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAF 184
Query: 209 ERNKLPGAIFTSFCGGAEIGQAIAKDP--RISLVSFTGSTKVGLMVQQTVHQRFGKCL-- 264
GG + + P I FTGS VG + V Q K L
Sbjct: 185 APE-----YVAVIQGGRDENSHLLSLPFDFIF---FTGSPNVG----KVVMQAAAKHLTP 232
Query: 265 --LELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVD 322
LEL G +I++ DAD+ V ++F +GQ L +H S+ +L++LV+
Sbjct: 233 VVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVE 292
Query: 323 VYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPT 382
K + + G L+ + + ++ + +++ G++L G + + T
Sbjct: 293 RVKTE-LPEINSTGKLV-------TERQVQRLVSLLEATQGQVLVGSQA-DVSKRALSAT 343
Query: 383 IV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK-INNSVPQGLSSSIFTRSPENIFKWL 440
+V + ++ EELF P+L V++F + A+ +N P+ L+ +F + + +
Sbjct: 344 VVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGII 403
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 2e-09
Identities = 78/537 (14%), Positives = 136/537 (25%), Gaps = 163/537 (30%)
Query: 5 KQEYEFL-SEIGLSPETPGC----FVNGKWKAHGPTVSSINPVN---NQKIATVVEASLE 56
+ Y+FL S I P ++ + + + N Q + +A LE
Sbjct: 88 RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN-DNQVFAKYNVSRLQPYLKLRQALLE 146
Query: 57 DYEE------GMKACSEASKIWMELPAPKRGEVVRQ---------IG-----DALREKLH 96
G+ K W+ L +V + + + + E L
Sbjct: 147 LRPAKNVLIDGVLGSG---KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203
Query: 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMML----ETW 152
L + + ++ I L R L +P L
Sbjct: 204 KLLYQID-PNWTSRSDHSSNIKLRIH--SIQAELRRLL------KSKPYENCLLVLLNVQ 254
Query: 153 NPLGVVGVITAFNFPCAVL--GWNACIALVCGN------CVVWKGAPTTP---------L 195
N AFN C +L + + TP
Sbjct: 255 NA----KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310
Query: 196 ITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDP-------RISLVSFTGSTKV 248
+ L EV N P + + I ++I ++ T +
Sbjct: 311 LDCRPQDLPREVLTTN--PRRL-------SIIAESIRDGLATWDNWKHVNCDKLTTIIES 361
Query: 249 GLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQR---CTTCRR 305
L V + R K LS + A I + S+++ V + +
Sbjct: 362 SLNVLEPAEYR--KMFDRLS-----VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 306 LLIHE-------SIYQTVLD-------------QLVDVYKQVKIGDPLEKGTL------- 338
L+ + SI L+ +VD Y K D +
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474
Query: 339 ------LGPLHTPESRKNFEKG------IEN-IKSQGGKILTGGSV-------------- 371
L + PE F +E I+ GS+
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Query: 372 ----------IESEGNFVQP--TIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416
+ + +F+ + S D+++ L A + FEEA K
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI-----FEEAHKQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 2e-07
Identities = 61/469 (13%), Positives = 126/469 (26%), Gaps = 172/469 (36%)
Query: 5 KQE---YEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEG 61
KQE +F+ E+ L N K+ +S I Q Y E
Sbjct: 74 KQEEMVQKFVEEV-LRI-------NYKF-----LMSPIKTEQRQP-----SMMTRMYIE- 114
Query: 62 MKACSEASKIWMELPAPKRGEVVR-QIGDALREKLHHL--GRLLSIE-MGKILPEGIGEV 117
+ +++ + + V R Q LR+ L L + + I+ + G G
Sbjct: 115 -----QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL-----GSG-- 162
Query: 118 QEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177
+ + V S + V +F
Sbjct: 163 KTW-------------VALDVCLSYK----------------VQCKMDFK---------- 183
Query: 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFER-NKLPGAIFTSFCGGAEIGQAIAKDPR 236
+ W + + V E KL I ++ ++ I +
Sbjct: 184 -------IFW--------LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI----K 224
Query: 237 ISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSV-LFAAVGT 295
+ + S + L + + CL +++ + V++ + A
Sbjct: 225 LRIHSIQAELRRLLK-----SKPYENCL---------LVLLN------VQNAKAWNAFN- 263
Query: 296 AGQRCTTCRRLLIHESIYQTVLDQL-VDVYKQVKIGD---PLEKGTLLG----------- 340
+C+ LL + ++ V D L + + L +
Sbjct: 264 -----LSCKILLT--TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 341 ----------PLHT---PESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEIS 387
P ES ++ +N K LT ++IES N ++P
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT--TIIESSLNVLEP------ 368
Query: 388 PTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
++ ++ + F + I + + + +
Sbjct: 369 ---AEYRK------MF-DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV 407
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 Length = 427 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 9e-04
Identities = 47/230 (20%), Positives = 81/230 (35%), Gaps = 65/230 (28%)
Query: 136 GSVIPS-ERPNHMMLETWN-PLGVVGVI-------TAFNFPCAVLGWNACIALVCGNCVV 186
G VI S R + + + P+G +G+I T +L AL GN ++
Sbjct: 105 GEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTV---ETTIL------ALKSGNTIL 155
Query: 187 WKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246
+G AI + E + ++P + + + T +
Sbjct: 156 LRGGSDALNSNKAIVSAIREALKETEIPESS-------------------VEFIENTDRS 196
Query: 247 KVGLMVQQTVHQ-----RFGKCLLE-------------LSGNNAIIIMDDADIKLAVRSV 288
V M++ + R G L+ GN I + + AD+K AV +
Sbjct: 197 LVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVI 256
Query: 289 LFAAVGTAGQR---CTTCRRLLIHESIYQTVLDQLVDVY--KQVKI-GDP 332
+ A QR C +LL+HE I + L +V+ V++ G
Sbjct: 257 INAKT----QRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCE 302
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 441 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 93.2 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-100 Score=780.41 Aligned_cols=418 Identities=29% Similarity=0.536 Sum_probs=395.2
Q ss_pred CCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 18 PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 18 ~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
+...++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|+.+|.++|+++++.|++|+
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34567999999986 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|++++++|+|||+.+++. ++..+++.++|++...+.+.+...+.. ++...+++++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc-CCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999986 699999999999999988877665543 4566788999999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.++
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l----~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 238 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKL----AEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHH----HHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHH
Confidence 99999999999999999999999876 5667788999999999999 789999999999999999999999998887
Q ss_pred H-HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 254 Q-TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 254 ~-~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
+ .+++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 239 ~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp 318 (490)
T 2wme_A 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCC
Confidence 6 456778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+++++++||+++..+++++.++|++++++|+++++||.+.+ ..|+|++|||+ +++++|++++||+||||++|++|
T Consensus 319 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 398 (490)
T 2wme_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred ccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEe
Confidence 99999999999999999999999999999999999998744 36999999999 89999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+||||+++|+++|||++||||+|.+++++++
T Consensus 399 ~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~ 431 (490)
T 2wme_A 399 DDEDEAIRRANDTEYGLAAGVVTQDLARAHRAI 431 (490)
T ss_dssp SCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHH
Confidence 999999999999999999999999999999875
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-97 Score=764.95 Aligned_cols=436 Identities=56% Similarity=0.974 Sum_probs=415.1
Q ss_pred chhhHHHHHhccCCCCCCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHH
Q 013505 4 AKQEYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83 (441)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~ 83 (441)
+++++..|+.++.. ...++||||+|+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++
T Consensus 8 ~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~ 86 (500)
T 2j6l_A 8 NQPQYAWLKELGLR-EENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEI 86 (500)
T ss_dssp GSGGGGGGGGGTCC-SEEECEESSSEECCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred ccchhHHHHhcCCC-CCCCceECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 57889999999876 66789999999977788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcC
Q 013505 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163 (441)
Q Consensus 84 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 163 (441)
|+++++.|++++++|+++++.|+|||+.+++.|+..+++.++|++...+.+.+...+...++...+..++|+|||++|+|
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P 166 (500)
T 2j6l_A 87 VRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITA 166 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECC
Confidence 99999999999999999999999999999999999999999999988877766655443345556778999999999999
Q ss_pred CCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEee
Q 013505 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFT 243 (441)
Q Consensus 164 ~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ft 243 (441)
||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+|+.++++.|++||+|++|+||
T Consensus 167 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FT 246 (500)
T 2j6l_A 167 FNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFT 246 (500)
T ss_dssp SSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEE
T ss_pred CcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred CChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHH
Q 013505 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (441)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 323 (441)
||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 247 GS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 326 (500)
T 2j6l_A 247 GSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKA 326 (500)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceE
Q 013505 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402 (441)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~ 402 (441)
++++++|+|.++++++||++++.++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||+
T Consensus 327 ~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 406 (500)
T 2j6l_A 327 YAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPIL 406 (500)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEE
T ss_pred hhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceE
Confidence 9999999999999999999999999999999999999999999999864456999999999 799999999999999999
Q ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 403 ~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 407 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 444 (500)
T 2j6l_A 407 YVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWL 444 (500)
T ss_dssp EEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHH
T ss_pred EEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 99999999999999999999999999999999999875
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-97 Score=760.54 Aligned_cols=417 Identities=28% Similarity=0.498 Sum_probs=397.3
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
..++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999985 568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
|++++++|+|||+.+++.|+..+++.++|++...++..+...+...++...+++++|+|||++|+|||||+...++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999999888776655554334567788999999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~a 247 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAM----AFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHcCCEEEEECCCCCcHHHHHH----HHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999876 5668889999999999999 778999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 248 a~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 248 APTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHH
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~ 415 (441)
+++||+++..++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999875557999999999 8999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 416 INNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 416 ~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|+++|||+++|||+|.+++++++
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~ 432 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVA 432 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHH
T ss_pred HHhCCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999998874
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-96 Score=757.37 Aligned_cols=414 Identities=28% Similarity=0.497 Sum_probs=395.3
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
.++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|+++++.|++++++|
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 112 (504)
T 3ek1_A 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDI 112 (504)
T ss_dssp SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999986 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
+++++.|+|||+.+++.|+..+++.++|++...++..+...+...++...++.++|+|||++|+|||||+...++++++|
T Consensus 113 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 192 (504)
T 3ek1_A 113 ALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPA 192 (504)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999998887766655544455677889999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhh
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (441)
|++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.++
T Consensus 193 LaaGN~VVlKPs~~tp~t~~~l----~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 193 LAAGCTMIVRPADLTPLTALAL----GVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHcCCEEEEECCCcChHHHHHH----HHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 9999999999999999999875 5678889999999999998 7789999999999999999999999999999999
Q ss_pred ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCC
Q 013505 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (441)
Q Consensus 258 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 337 (441)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++
T Consensus 269 ~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 348 (504)
T 3ek1_A 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGV 348 (504)
T ss_dssp GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHH
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKI 416 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~ 416 (441)
++||+++..++++++++|++++++|+++++||.. .+|+|++|||+ +++++|++++||+||||++|++|+|+||||++
T Consensus 349 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 426 (504)
T 3ek1_A 349 VIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQ 426 (504)
T ss_dssp CBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHH
Confidence 9999999999999999999999999999999976 36899999999 89999999999999999999999999999999
Q ss_pred HhcCCCCcEEEEecCCHHHHHhhh
Q 013505 417 NNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 417 ~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+++|||+++|||+|.+++++++
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a 450 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVS 450 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHH
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHH
Confidence 999999999999999999998874
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-97 Score=760.88 Aligned_cols=428 Identities=25% Similarity=0.424 Sum_probs=397.1
Q ss_pred HHHHHhccCCCCCCCceecCeeccCCC-eEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHH
Q 013505 8 YEFLSEIGLSPETPGCFVNGKWKAHGP-TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (441)
Q Consensus 8 ~~~~~~~~~~~~~~~~~I~g~~~~~~~-~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 86 (441)
+++++-....|...++||||+|+.+.. +++++||+||+++++++.++.+|+++|+++|++||+.|+.+|+.+|.++|++
T Consensus 13 ~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~ 92 (498)
T 4f3x_A 13 LGTENLYFQSMMDTQLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLK 92 (498)
T ss_dssp ----------CCCCCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCccchhhhhccccCeeECCEEeeCCCCeEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 356666667778889999999987433 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhCCChhhh-hHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCC
Q 013505 87 IGDALREKLHHLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFN 165 (441)
Q Consensus 87 ~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 165 (441)
+++.|+++.++|+++++.|+|||+.++ +.|+..+++.+++++...+.+.+...+...++...++.++|+|||++|+|||
T Consensus 93 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN 172 (498)
T 4f3x_A 93 IADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWN 172 (498)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCc
Confidence 999999999999999999999999999 8899999999999999888766554443234566788999999999999999
Q ss_pred chHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeC
Q 013505 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (441)
Q Consensus 166 ~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (441)
||+...++++++||++||+||+|||+.+|+++..+ .+++.++ +|+|++|+|+| +.++++.|+.||+|++|+|||
T Consensus 173 ~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l----~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTG 247 (498)
T 4f3x_A 173 YPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKL----ARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITG 247 (498)
T ss_dssp SHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEES
T ss_pred hHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHH----HHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEEC
Confidence 99999999999999999999999999999999976 5567788 99999999999 788999999999999999999
Q ss_pred ChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHH
Q 013505 245 STKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY 324 (441)
Q Consensus 245 s~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~ 324 (441)
|+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 248 S~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (498)
T 4f3x_A 248 DIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAV 327 (498)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCC-EEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceE
Q 013505 325 KQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVL 402 (441)
Q Consensus 325 ~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~ 402 (441)
+++++|+|+++++++||+++..+++++.++|++++++|+ ++++||...+..|+|++|||+ +++++|++++||+||||+
T Consensus 328 ~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 407 (498)
T 4f3x_A 328 STIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVV 407 (498)
T ss_dssp TTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEE
Confidence 999999999999999999999999999999999999999 999999876568999999999 899999999999999999
Q ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 403 YVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 403 ~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 408 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 445 (498)
T 4f3x_A 408 SVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAA 445 (498)
T ss_dssp EEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999999999999998874
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-96 Score=759.08 Aligned_cols=417 Identities=31% Similarity=0.519 Sum_probs=396.8
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHh--HHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEAS--KIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
..++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 111 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR 111 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHhH
Confidence 557899999986 57899999999999999999999999999999999999 88999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
++|++++++|+|||+.+++.|+..+++.+++++...+++.+...+...++...++.++|+|||++|+|||||+...++++
T Consensus 112 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 191 (520)
T 3ed6_A 112 EALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKI 191 (520)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999888766555443245667889999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++
T Consensus 192 apALaaGNtVVlKPs~~tp~t~~~l----~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~ 267 (520)
T 3ed6_A 192 APALATGCSLVMKPSEITPLTTIRV----FELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK 267 (520)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHH----HHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEEcCCcchHHHHHH----HHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999876 5667789999999999999 7899999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 268 ~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 268 NAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred HhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC----CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+++++||+++..++++++++|++++++|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 46999999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||+++|||+|.+++++++
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 458 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVA 458 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 9999999999999999999999999998874
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-96 Score=755.49 Aligned_cols=417 Identities=28% Similarity=0.479 Sum_probs=397.2
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4557899999986 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEE-eccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETW-NPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
+|+++++.|+|||+.+++.|+..+++.+++++...+++.+...+.. ++...++.+ +|+|||++|+|||||+...++++
T Consensus 90 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 168 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKL 168 (506)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHH
Confidence 9999999999999999999999999999999999988876655433 345677788 99999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++
T Consensus 169 a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~ 244 (506)
T 3rh9_A 169 SAALAAGCPSVIKPASETPLTMIAF----FSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIV 244 (506)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHH----HHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEEcCCccHHHHHHH----HHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999876 5667889999999999999 7789999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 245 ~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 245 DTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp HTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred HhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCC-CCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~e 412 (441)
+++++||+++..+++++.++|++++++|+++++||...+. .|+|++|||+ +++++|++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999986554 7999999999 8999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 413 AVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 413 ai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||+++|+++|||+++|||+|.+++++++
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~ 432 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVA 432 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999875
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-96 Score=761.44 Aligned_cols=428 Identities=26% Similarity=0.418 Sum_probs=397.1
Q ss_pred HHHHhccCCCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHH
Q 013505 9 EFLSEIGLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (441)
Q Consensus 9 ~~~~~~~~~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 86 (441)
....|++.+|...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++
T Consensus 15 ~~~~~~~s~m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~ 94 (521)
T 4e4g_A 15 TENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMK 94 (521)
T ss_dssp ---------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred chhhhHhhhhhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 45678888888889999999986 4689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCc
Q 013505 87 IGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNF 166 (441)
Q Consensus 87 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 166 (441)
+++.|++++++|++++++|+|||+.+++.|+..+++.++|++...+.+.+...+...++...++.++|+|||++|+||||
T Consensus 95 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 174 (521)
T 4e4g_A 95 FVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNF 174 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcc
Confidence 99999999999999999999999999999999999999999988777666544322234567889999999999999999
Q ss_pred hHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCCh
Q 013505 167 PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGST 246 (441)
Q Consensus 167 P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~ 246 (441)
|+...++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|+.||+|++|+||||+
T Consensus 175 P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~ 250 (521)
T 4e4g_A 175 PGMIPMWMFAPAIACGNAFILKPSERDPSVPIRL----AELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGST 250 (521)
T ss_dssp TTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCH
T ss_pred hHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCH
Confidence 9999999999999999999999999999999876 566788999999999999977888999999999999999999
Q ss_pred HHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecc-cHHHHHHHHHHHHH
Q 013505 247 KVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYK 325 (441)
Q Consensus 247 ~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~ 325 (441)
.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++
T Consensus 251 ~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~ 330 (521)
T 4e4g_A 251 PIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVE 330 (521)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred hhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc----CCCCceEeeEEE-EcCCCCCccccccccc
Q 013505 326 QVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI----ESEGNFVQPTIV-EISPTADIVKEELFAP 400 (441)
Q Consensus 326 ~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl-~~~~~~~i~~eE~fgP 400 (441)
++++|+|.++++++||+++..+++++.++|++++++|+++++||... +.+|+|++|||+ +++++|++++||+|||
T Consensus 331 ~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 410 (521)
T 4e4g_A 331 SLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGP 410 (521)
T ss_dssp TCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred hccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCc
Confidence 99999999999999999999999999999999999999999999753 247999999999 8999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 401 v~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 411 Vl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 450 (521)
T 4e4g_A 411 VLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFA 450 (521)
T ss_dssp EEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHH
Confidence 9999999999999999999999999999999999998875
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-95 Score=751.92 Aligned_cols=422 Identities=31% Similarity=0.515 Sum_probs=396.5
Q ss_pred cCCCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-----HhhCCCHHHHHHHHHHH
Q 013505 15 GLSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-----IWMELPAPKRGEVVRQI 87 (441)
Q Consensus 15 ~~~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~ 87 (441)
+++....++||||+|+. ++.+++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++
T Consensus 2 ~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~ 81 (503)
T 3iwj_A 2 DIPIPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAI 81 (503)
T ss_dssp --CCCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHH
T ss_pred CCCCCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHH
Confidence 45566778999999986 567899999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccc---cCCCCCceeEEEEeccceEEEEcCC
Q 013505 88 GDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVI---PSERPNHMMLETWNPLGVVGVITAF 164 (441)
Q Consensus 88 a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~ 164 (441)
++.|++|+++|++++++|+|||+.+++.|+..+++.+++++...+.+.+... .....+...++.++|+|||++|+||
T Consensus 82 a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw 161 (503)
T 3iwj_A 82 AAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPW 161 (503)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCC
Confidence 9999999999999999999999999999999999999999998877654331 1112345678899999999999999
Q ss_pred CchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEee
Q 013505 165 NFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFT 243 (441)
Q Consensus 165 n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ft 243 (441)
|||+...++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||
T Consensus 162 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FT 237 (503)
T 3iwj_A 162 NYPMLMATWKVAPALAAGCAAILKPSELASLTCLEL----GEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFT 237 (503)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEE
T ss_pred chHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHH----HHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEE
Confidence 999999999999999999999999999999999876 5667889999999999999 67899999999999999999
Q ss_pred CChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHH
Q 013505 244 GSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDV 323 (441)
Q Consensus 244 Gs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~ 323 (441)
||+.+|+.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 238 GS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 317 (503)
T 3iwj_A 238 GSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKW 317 (503)
T ss_dssp SCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccc
Q 013505 324 YKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAP 400 (441)
Q Consensus 324 ~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgP 400 (441)
++++++|+|+++++++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+ +++++|++++||+|||
T Consensus 318 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 397 (503)
T 3iwj_A 318 IKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGP 397 (503)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred HHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCc
Confidence 99999999999999999999999999999999999999999999998654 57999999999 8999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 401 v~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 398 Vl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 437 (503)
T 3iwj_A 398 VLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVT 437 (503)
T ss_dssp EEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 9999999999999999999999999999999999998874
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-95 Score=752.80 Aligned_cols=416 Identities=26% Similarity=0.503 Sum_probs=393.0
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
.++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|+.+|.++|+++++.|+++.+
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45799999986 367899999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCC---CCCceeEEEEeccceEEEEcCCCchHHhHH
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSE---RPNHMMLETWNPLGVVGVITAFNFPCAVLG 172 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 172 (441)
+|++++++|+|||+.+++ .|+..+++.++|++...+++.+..++.. .++...++.++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 8999999999999998888766544432 123356788999999999999999999999
Q ss_pred HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHH
Q 013505 173 WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLM 251 (441)
Q Consensus 173 ~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 251 (441)
+++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l----~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~ 272 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKF----AELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH 272 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHH----HHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999876 5667889999999999999 7789999999999999999999999999
Q ss_pred HHHHhh-ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 252 VQQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 252 i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG 352 (517)
T 2o2p_A 273 IMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352 (517)
T ss_dssp HHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred HHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCC
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
||+++++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 353 dp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp CTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 999999999999999999999999999999999999999864446999999999 8999999999999999999999999
Q ss_pred --HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 --FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 --~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|||+++|+++|||+++|||+|.+++++++
T Consensus 433 ~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 465 (517)
T 2o2p_A 433 GDVDAVLSRANATEFGLASGVFTRDINKALYVS 465 (517)
T ss_dssp TCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHH
Confidence 9999999999999999999999999998874
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-95 Score=751.03 Aligned_cols=421 Identities=28% Similarity=0.511 Sum_probs=396.6
Q ss_pred CCCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHh
Q 013505 16 LSPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALRE 93 (441)
Q Consensus 16 ~~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 93 (441)
.++...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 87 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRE 87 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHT
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence 3456678999999986 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
+.++|+++++.|+|||+.+++.|+..+++.+++++...+++.+...+...++...+..++|+|||++|+|||||+...++
T Consensus 88 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 167 (497)
T 3k2w_A 88 NKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGR 167 (497)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999999998887766554433456678899999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|
T Consensus 168 ~~~~ALaaGN~VVlKps~~tp~t~~~l----~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i 243 (497)
T 3k2w_A 168 KIGPALITGNTMVLKPTQETPLATTEL----GRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQI 243 (497)
T ss_dssp HHHHHHHTTCEEEEECCSSSCHHHHHH----HHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHH
Confidence 999999999999999999999999876 5667889999999999999 78899999999999999999999999999
Q ss_pred HHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 253 ~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 244 ~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 244 YKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcc--cCC--CCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV--IES--EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+++++++||+++..+++++.++|++++++|+++++||.. .+. .|+|++|||+ +++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 333 6999999999 89999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 404 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 436 (497)
T 3k2w_A 404 SSMEQAIEFCNDSIYGLSAYVHTQSFANINQAI 436 (497)
T ss_dssp SCHHHHHHHHTCSSEESEEEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHH
Confidence 999999999999999999999999999998874
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-95 Score=751.21 Aligned_cols=418 Identities=28% Similarity=0.500 Sum_probs=396.9
Q ss_pred CCCCceecCeecc--CCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHh--HHhhCCCHHHHHHHHHHHHHHHHh
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEAS--KIWMELPAPKRGEVVRQIGDALRE 93 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~ 93 (441)
...++||||+|+. ++++++++||+| |+++++++.++.+|+++++++|++|| +.|+.++..+|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 4567999999986 467999999999 99999999999999999999999999 789999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 94 ~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
++++|+++++.|+|||+.+++.|+..+++.++++++..+++.+...+...++...++.++|+|||++|+|||||+...++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999999998887665554432455678899999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 256 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRL----AELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHH----HHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 999999999999999999999999876 5567788999999999999 88999999999999999999999999999
Q ss_pred HHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 253 ~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 257 ~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 336 (528)
T 3u4j_A 257 GEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDP 336 (528)
T ss_dssp HHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECT
T ss_pred HHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCC-CCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES-EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
+++++++||+++..+++++.++|++++++|+++++||...+. .|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 337 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 416 (528)
T 3u4j_A 337 LNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTA 416 (528)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCH
Confidence 999999999999999999999999999999999999987544 7999999999 89999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|||+++|+++|||+++|||+|.+++++++
T Consensus 417 deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 446 (528)
T 3u4j_A 417 DEAVALANATEFGLSASVWSTNLETALQTI 446 (528)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHH
Confidence 999999999999999999999999998874
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-95 Score=747.08 Aligned_cols=415 Identities=24% Similarity=0.441 Sum_probs=388.9
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|+++++.|+++.+
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 103 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSS 103 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999986 45689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEE-EeccceEEEEcCCCchHHhHHHH
Q 013505 97 HLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLET-WNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
+|+++++.|+|||+.+++ .|+..+++.+++++...+......... ++...++. ++|+|||++|+|||||+...+++
T Consensus 104 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (497)
T 3i44_A 104 DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQVTLK 181 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHHHHH
Confidence 999999999999999999 899999999999988766543322111 13345667 99999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|+
T Consensus 182 ~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~ 257 (497)
T 3i44_A 182 VIPALLAGCTMVLKPSEIAPLSAMLF----AEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDIS 257 (497)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccHHHHHHH----HHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 99999999999999999999999875 6678899999999999999 789999999999999999999999999999
Q ss_pred HHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 254 ~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
+.+++++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+
T Consensus 258 ~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~ 336 (497)
T 3i44_A 258 KNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGH 336 (497)
T ss_dssp HHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCc-ccC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGS-VIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
++++++||++++.++++++++|++++++|+++++||. ..+ ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 337 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 416 (497)
T 3i44_A 337 QTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNT 416 (497)
T ss_dssp SCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCC
Confidence 9999999999999999999999999999999999994 332 26999999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||++||||+|.+++++++
T Consensus 417 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a 447 (497)
T 3i44_A 417 EDEAVTLANDTEYGLTNYIQSQDRSKCRRIA 447 (497)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHH
Confidence 9999999999999999999999999998874
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-95 Score=751.68 Aligned_cols=416 Identities=30% Similarity=0.515 Sum_probs=395.7
Q ss_pred CCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 19 ETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 19 ~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
...++||||+|+.++.+++++||+| |+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|+++++.|++++++
T Consensus 36 ~~~~~~I~G~~~~~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (538)
T 3qan_A 36 KEYPLIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHE 115 (538)
T ss_dssp EEECEEETTEEECCSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceeECCEEecCCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999988888999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHh-hhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGL-SRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
|+++++.|+|||+.+++.|+..+++.+++++.. .+...+...+.. ++...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 194 (538)
T 3qan_A 116 FSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGTAV 194 (538)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999988 566666655432 355678899999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.
T Consensus 195 ~ALaaGN~VVlKps~~tp~ta~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 270 (538)
T 3qan_A 195 APIVTGNTVVLKPASTTPVVAAKF----VEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270 (538)
T ss_dssp HHHHTTCEEEEECCTTSHHHHHHH----HHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCccHHHHHHH----HHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999875 6678889999999999999 78899999999999999999999999999999
Q ss_pred hhcc------CCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhcc
Q 013505 256 VHQR------FGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI 329 (441)
Q Consensus 256 a~~~------~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 329 (441)
++++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 271 aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp HTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 9988 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeC
Q 013505 330 GDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQ 408 (441)
Q Consensus 330 g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~ 408 (441)
|+|+++++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+ +++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 999999875447999999999 899999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 409 TFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 409 ~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|||+++|+++|||+++|||+|.+++++++
T Consensus 430 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 461 (538)
T 3qan_A 430 DFDHALEIANNTEYGLTGAVITRNRAHIEQAK 461 (538)
T ss_dssp SHHHHHHHHHCSSEESEEEEECSCHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH
Confidence 99999999999999999999999999998874
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-94 Score=741.98 Aligned_cols=409 Identities=30% Similarity=0.544 Sum_probs=386.6
Q ss_pred ceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Q 013505 23 CFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLL 102 (441)
Q Consensus 23 ~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~ 102 (441)
+||||+|+.+++ ++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++
T Consensus 2 ~~I~G~~~~~~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 80 (486)
T 3pqa_A 2 MFIDGKWINRED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKIL 80 (486)
T ss_dssp -------CCCCC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred eeECCEEecCCC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999998777 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCC
Q 013505 103 SIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCG 182 (441)
Q Consensus 103 ~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaG 182 (441)
+.|+|||..+++.|+..+++.+++++...+.+.+...+. ++...++.++|+|||++|+|||||+...++++++||++|
T Consensus 81 ~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaG 158 (486)
T 3pqa_A 81 AIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATG 158 (486)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999988876655543 255678899999999999999999999999999999999
Q ss_pred CEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCC
Q 013505 183 NCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFG 261 (441)
Q Consensus 183 N~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~ 261 (441)
|+||+|||+.+|+++..+++++.++++++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.++ ++
T Consensus 159 N~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa--~~ 236 (486)
T 3pqa_A 159 NVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--FK 236 (486)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--SS
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--CC
Confidence 99999999999999999999999999999999999999999 7788999999999999999999999999999887 89
Q ss_pred ceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCC
Q 013505 262 KCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGP 341 (441)
Q Consensus 262 ~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gp 341 (441)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||
T Consensus 237 ~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 316 (486)
T 3pqa_A 237 KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGP 316 (486)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCC
T ss_pred ceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCC
Q 013505 342 LHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVP 421 (441)
Q Consensus 342 l~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~ 421 (441)
+++..+++++.++|++++++|+++++||.. .|+|++|||++++++|++++||+||||++|++|+| ||||+++|+++
T Consensus 317 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~ 392 (486)
T 3pqa_A 317 LISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTE 392 (486)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSS
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEEeCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCC
Confidence 999999999999999999999999999975 68999999999999999999999999999999999 99999999999
Q ss_pred CCcEEEEecCCHHHHHhhh
Q 013505 422 QGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 422 ~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|||+|.+++++++
T Consensus 393 ~gL~a~v~t~d~~~a~~~~ 411 (486)
T 3pqa_A 393 YGLHSAIFTNDINKSLKFA 411 (486)
T ss_dssp CCSEEEEECSBHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHH
Confidence 9999999999999998874
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-94 Score=741.91 Aligned_cols=417 Identities=28% Similarity=0.545 Sum_probs=396.4
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
..++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999986 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
|+++++.|+|||..+++.|+..+++.+++++.......+...+...++...+.+++|+|||++|+|||||+...++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999998877766555544334566788999999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALAL----AELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCCCcHHHHHH----HHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999876 5668889999999999999 789999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 245 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 245 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp TTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred hhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHH
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~ 415 (441)
+++||++++.++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 999999999999999999999999999999999875556899999999 8999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 416 INNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 416 ~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|+++|||+++|||+|.+++++++
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~ 429 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVG 429 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHH
T ss_pred HHhcCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999998874
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-94 Score=745.32 Aligned_cols=416 Identities=27% Similarity=0.486 Sum_probs=393.1
Q ss_pred CCCCceecCeecc--CCCe-EeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 19 ETPGCFVNGKWKA--HGPT-VSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~-~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
...++||||+|+. ++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++|.
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 97 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 4467899999986 3567 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
++|+++++.|+|||+.+++.|+..+++.++|++...+++.+...+.. ++...++.++|+|||++|+|||||+...++++
T Consensus 98 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 176 (503)
T 1a4s_A 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999998888765544432 34456788999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| + ++++.|+.||+|++|+||||+.+|+.|++
T Consensus 177 a~ALaaGN~VVlKps~~tp~ta~~l----~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 251 (503)
T 1a4s_A 177 APALACGNAVVFKPSPMTPVTGVIL----AEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVME 251 (503)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 9999999999999999999999876 5667889999999999999 6 89999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 252 ~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 331 (503)
T 1a4s_A 252 MSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLL 331 (503)
T ss_dssp HHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc--C----CCCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI--E----SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+++++||+++..++++++++|++++++|+++++||+.. + ..|+|++|||+ +++++|++++||+||||++|++|
T Consensus 332 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 411 (503)
T 1a4s_A 332 TETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411 (503)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred cCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEec
Confidence 99999999999999999999999999999999999764 2 35899999999 89999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 412 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 444 (503)
T 1a4s_A 412 DTEEEVLQRANNTTFGLASGVFTRDISRAHRVA 444 (503)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999999999999998874
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-94 Score=743.12 Aligned_cols=416 Identities=29% Similarity=0.519 Sum_probs=393.0
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhhCCCHHHHHHHHHHHHHHHHhh
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREK 94 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 94 (441)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 99 (501)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 446899999986 367899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
+++|++++++|+|||+.++. .|+..+++.+++++...+++.+...+. .++...++.++|+|||++|+|||||+...++
T Consensus 100 ~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 178 (501)
T 1bxs_A 100 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 178 (501)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHH
Confidence 99999999999999999874 699999999999999888876654443 2344567889999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|
T Consensus 179 ~~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i 254 (501)
T 1bxs_A 179 KIGPALSCGNTVVVKPAEQTPLTALHM----GSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 254 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeeeccCCCccHHHHHHH----HHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999876 5667889999999999999 88899999999999999999999999999
Q ss_pred HHHhh-ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCC
Q 013505 253 QQTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (441)
Q Consensus 253 ~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 331 (441)
++.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 255 ~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (501)
T 1bxs_A 255 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 334 (501)
T ss_dssp HHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred HHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCC
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
|+++++++||+++..++++++++|++++++|+++++||+..+..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 335 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (501)
T 1bxs_A 335 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 414 (501)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred CcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCH
Confidence 99999999999999999999999999999999999999864446999999999 89999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||||+++|+++|||+++|||+|.+++++++
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 444 (501)
T 1bxs_A 415 DDVIKRANNTFYGLSAGIFTNDIDKAITVS 444 (501)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHHHHhcCCCCeeEEEEcCCHHHHHHHH
Confidence 999999999999999999999999998874
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-95 Score=747.49 Aligned_cols=416 Identities=28% Similarity=0.495 Sum_probs=393.8
Q ss_pred CCCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhh
Q 013505 17 SPETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREK 94 (441)
Q Consensus 17 ~~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 94 (441)
++...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 90 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRER 90 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHH
Confidence 355678999999985 567999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhh----hcCccccCCCCCceeEEEEeccceEEEEcCCCchHHh
Q 013505 95 LHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ----LNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAV 170 (441)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 170 (441)
+++|+++++.|+|||+.++ |+..+++.+++++...+. +.+...+.. ++. .++.++|+|||++|+|||||+..
T Consensus 91 ~~ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~-~~~-~~~~~~P~GVV~~I~PwN~P~~~ 166 (517)
T 3r31_A 91 NDALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPLG-GDF-AYTKRVPLGVCVGIGAWNYPQQI 166 (517)
T ss_dssp HHHHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEECS-SSE-EEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCcccccC-CCc-ceEEEcCccEEEEECCCcchHHH
Confidence 9999999999999999998 999999999999998887 666655432 344 78899999999999999999999
Q ss_pred HHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHH
Q 013505 171 LGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGL 250 (441)
Q Consensus 171 ~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~ 250 (441)
.++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.++++.|++||+|++|+||||+.+|+
T Consensus 167 ~~~~~a~ALaaGN~VVlKps~~tp~t~~~l----~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~ 242 (517)
T 3r31_A 167 ACWKAAPALVAGNAMVFKPSENTPLGALKI----AEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGR 242 (517)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCSHHHHH----HHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEcCcccHHHHHHH----HHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHH
Confidence 999999999999999999999999999876 5667889999999999999888999999999999999999999999
Q ss_pred HHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 251 ~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
.|++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 243 ~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 243 KVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC---CCCceEeeEEE-EcCCCCCccccccccceEEEEE
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE---SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMK 406 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~---~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~ 406 (441)
+|+++++++||++++.++++++++|++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 9999999999999999999999999999999999999993122 36999999999 8999999999999999999999
Q ss_pred eCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 407 FQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 407 ~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 436 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVV 436 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHH
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999875
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-94 Score=742.98 Aligned_cols=415 Identities=29% Similarity=0.497 Sum_probs=392.1
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
.++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|+
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 45799999986 467899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|+++++.|+|||+.++. .|+..+++.++|+++..+++.+..++. .++...++.++|+|||++|+|||||+...+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 178 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWK 178 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHH
Confidence 9999999999999999874 699999999999999888776654443 23445678899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|+
T Consensus 179 ~a~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 254 (500)
T 1o04_A 179 LGPALATGNVVVMKVAEQTPLTALYV----ANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 254 (500)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccChHHHHHH----HHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999876 5667889999999999999 888999999999999999999999999999
Q ss_pred HHhh-ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 254 QTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 254 ~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
+.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 255 ~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 334 (500)
T 1o04_A 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 334 (500)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCc
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
+++++++||+++..++++++++|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 335 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 414 (500)
T 1o04_A 335 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 414 (500)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHH
Confidence 9999999999999999999999999999999999999764346999999999 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||+++|||+|.+++++++
T Consensus 415 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 443 (500)
T 1o04_A 415 EVVGRANNSTYGLAAAVFTKDLDKANYLS 443 (500)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999998874
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-94 Score=741.18 Aligned_cols=418 Identities=29% Similarity=0.523 Sum_probs=394.5
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERAS 84 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456899999986 46789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
+|++++++|+|||+.+++.|+..+++.+++++...+++.+...+...++...+..++|+|||++|+|||||+...+++++
T Consensus 85 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 164 (479)
T 2imp_A 85 EISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMA 164 (479)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999888776665544333445678899999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHH
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 255 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.
T Consensus 165 ~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 240 (479)
T 2imp_A 165 PALLTGNTIVIKPSEFTPNNAIAF----AKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAT 240 (479)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCccchHHHHHH----HHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999976 5567789999999999999 67789999999999999999999999999999
Q ss_pred hhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC-
Q 013505 256 VHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE- 334 (441)
Q Consensus 256 a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~- 334 (441)
++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 241 aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 320 (479)
T 2imp_A 241 AAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 320 (479)
T ss_dssp HHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTC
T ss_pred HhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
+++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+ +++++|++++||+||||++|++|+|+|||
T Consensus 321 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eA 400 (479)
T 2imp_A 321 NDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDA 400 (479)
T ss_dssp SSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999999999764446999999999 89999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||+++|||+|.+++++++
T Consensus 401 i~~aN~~~~gL~a~v~t~d~~~~~~~~ 427 (479)
T 2imp_A 401 ISMANDSDYGLTSSIYTQNLNVAMKAI 427 (479)
T ss_dssp HHHHHCSSEESEEEEECCCHHHHHHHH
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHH
Confidence 999999999999999999999998875
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-94 Score=743.82 Aligned_cols=416 Identities=27% Similarity=0.483 Sum_probs=393.2
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999986 467899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
|+++++.|+|||+.+++.|+..+++.++++++..+++.+..++...++...++.++|+|||++|+|||||+...++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 185 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence 99999999999999999999999999999999888876655443233456688999999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 186 ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~a 261 (515)
T 2d4e_A 186 ALAFGNTVVLKPAEWSPFTATKL----AEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNA 261 (515)
T ss_dssp HHHTTCCEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCeeeecCCCCcHHHHHHH----HHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHH
Confidence 99999999999999999999876 5667789999999999999 678999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 262 a~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 341 (515)
T 2d4e_A 262 ADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPE 341 (515)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--------CCCceEeeEEE-EcCCCCCccccccccceEEEEEe
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--------SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKF 407 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~ 407 (441)
+++||+++..++++++++|++++++|+++++||...+ ..|+|++|||+ + +++|++++||+||||++|++|
T Consensus 342 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~ 420 (515)
T 2d4e_A 342 TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPF 420 (515)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEee
Confidence 9999999999999999999999999999999997643 26999999999 8 999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 408 QTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 408 ~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 421 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 453 (515)
T 2d4e_A 421 KDEEEALRKANDTKYGLAAYVFTRDLERAHRLA 453 (515)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999999999999998874
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-94 Score=742.33 Aligned_cols=416 Identities=28% Similarity=0.458 Sum_probs=392.9
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH--HhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK--IWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|+.+|.++|+++++.|++++
T Consensus 8 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~ 87 (495)
T 3b4w_A 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERK 87 (495)
T ss_dssp CSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 346899999986 367899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|++++++|+|||+.+++ .|+..+++.+++++...+++.+..++.. .+...+..++|+|||++|+|||||+...+++
T Consensus 88 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 88 DLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 9999999999999999997 8999999999999998888766544322 2335678899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.++++.|++||+|++|+||||+.+|+.|++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~ 242 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANAL----AEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGR 242 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHH----HHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHH----HHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999876 56677899999999999998889999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 243 ~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 322 (495)
T 3b4w_A 243 RAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSD 322 (495)
T ss_dssp HHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTC
T ss_pred HhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
+++++||+++..+++++.+++++++++|+++++||+..+ ..|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 323 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 402 (495)
T 3b4w_A 323 PAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEE 402 (495)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHH
Confidence 999999999999999999999999999999999997643 36999999999 799999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||+++|||+|.+++++++
T Consensus 403 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 431 (495)
T 3b4w_A 403 DAIAIANDSVYGLAGSVWTTDVPKGIKIS 431 (495)
T ss_dssp HHHHHHHCSSCCSCCEEECSCHHHHHHHH
T ss_pred HHHHHHhcCCCCeEEEEECCCHHHHHHHH
Confidence 99999999999999999999999998874
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-94 Score=742.47 Aligned_cols=412 Identities=27% Similarity=0.504 Sum_probs=390.2
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.+
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4457899999986 45799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCC-C----CceeEEEEeccceEEEEcCCCchHHhH
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSER-P----NHMMLETWNPLGVVGVITAFNFPCAVL 171 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 171 (441)
+|+++++.|+|||..+++.|+..+++.+++++...+++.+...+... + +...++.++|+|||++|+|||||+...
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999988877665443221 2 345678899999999999999999999
Q ss_pred HHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHH
Q 013505 172 GWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGL 250 (441)
Q Consensus 172 ~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~ 250 (441)
++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l----~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~ 245 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKM----VEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGE 245 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHH
Confidence 99999999999999999999999999875 6778899999999999999 789999999999999999999999999
Q ss_pred HHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 251 MVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 251 ~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
.|++.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 246 ~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 246 RISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 9999987 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
||+ +++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 399 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC
Confidence 999 9999999999999999999999999999999999974 6899999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||++||||+|.+++++++
T Consensus 400 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 430 (505)
T 3prl_A 400 ANEAISLSNQSDYGLQASIFTKDTDRAINIG 430 (505)
T ss_dssp HHHHHHHHHTSSEESEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999998874
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-94 Score=738.88 Aligned_cols=415 Identities=28% Similarity=0.483 Sum_probs=391.2
Q ss_pred CCCceecCeeccC-CCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 20 TPGCFVNGKWKAH-GPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 20 ~~~~~I~g~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
..++||||+|+.+ +.+++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|
T Consensus 23 ~~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 102 (495)
T 1wnd_A 23 QHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVF 102 (495)
T ss_dssp CCCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccCeEECCEEecCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999863 478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 99 GRLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
+++++.|+|||+.+++. |+..+++.++++++..+++.+..++...++...++.++|+|||++|+|||||+...++++++
T Consensus 103 a~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 182 (495)
T 1wnd_A 103 AELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 182 (495)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHH
Confidence 99999999999999988 99999999999998887766554433223445678899999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++ +|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 183 ALaaGN~VVlKps~~tp~t~~~l----~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 257 (495)
T 1wnd_A 183 ALAAGNCVVLKPSEITPLTALKL----AELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT 257 (495)
T ss_dssp HHHTTCEEEEECCTTCCHHHHHH----HHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCeeEeeCCCCChHHHHHH----HHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999976 5667778 99999999999 788999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 258 a~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 258 ASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp GGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred HhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCC-CEEEecCc-ccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQG-GKILTGGS-VIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
+++||+++..++++++++|++++++| +++++||. .. ..|+|++|||+ +++++|++++||+||||++|++|+|+|||
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 416 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQV 416 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999 99999997 43 26999999999 89999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||+++|||+|.+++++++
T Consensus 417 i~~aN~~~~gL~a~v~t~d~~~a~~~~ 443 (495)
T 1wnd_A 417 VNWANDSQYGLASSVWTKDVGRAHRVS 443 (495)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHH
Confidence 999999999999999999999998874
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-94 Score=737.85 Aligned_cols=417 Identities=27% Similarity=0.492 Sum_probs=394.7
Q ss_pred CCCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 19 ETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 19 ~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
...++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++|
T Consensus 11 ~~~~~~i~g~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 90 (487)
T 2w8n_A 11 LRTDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDL 90 (487)
T ss_dssp CCCSEEETTEEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cccCeeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33568999999875478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
+++++.|+|||+.+++.|+..+++.++++++..+++.+...+...++...+..++|+|||++|+|||||+...++++++|
T Consensus 91 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 170 (487)
T 2w8n_A 91 ARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAA 170 (487)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999998888766654432345567888999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEec---C-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFC---G-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~---g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
|++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+ | +.++++.|++||+|++|+||||+.+|+.|++
T Consensus 171 LaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~ 246 (487)
T 2w8n_A 171 LAAGCTVVVKPAEDTPFSALAL----AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246 (487)
T ss_dssp HHHTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHH
T ss_pred HHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHH
Confidence 9999999999999999999875 566788999999999999 8 7889999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHh-hccCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ-VKIGDPL 333 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~ 333 (441)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 247 ~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 247 HAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCc-eEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN-FVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
++++++||+++..++++++++|++++++|+++++||+.. ..|+ |++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999763 3689 9999999 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||++||||+|.+++++++
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 434 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVA 434 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHH
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHH
Confidence 99999999999999999999999998874
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-94 Score=741.57 Aligned_cols=415 Identities=28% Similarity=0.511 Sum_probs=391.4
Q ss_pred CCCceecCeeccCCCeEeeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 20 TPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 20 ~~~~~I~g~~~~~~~~~~~~~P~-tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
..++||||+|+.++.+++++||+ ||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++|
T Consensus 37 ~~~~~i~G~~~~~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 116 (516)
T 1uzb_A 37 HYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKREL 116 (516)
T ss_dssp EECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccceeECCEEecCCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999777889999999 69999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCcccc-CCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhh
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACI 177 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ 177 (441)
+++++.|+|||+.+++.|+..+++.++|++...+++.+...+ ...++...++.++|+|||++|+|||||+...++++++
T Consensus 117 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 196 (516)
T 1uzb_A 117 EATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVG 196 (516)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999888877665432 2223456678899999999999999999999999999
Q ss_pred hhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 178 ALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 178 ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 197 ALaaGN~VVlKps~~tp~ta~~l----~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 197 PVAVGNTVIAKPAEDAVVVGAKV----FEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHH----HHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHcCCeEEEeCCCCCHHHHHHH----HHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999876 5667789999999999999 888999999999999999999999999999999
Q ss_pred h------ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 257 H------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 257 ~------~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
+ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 8 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+| ++++++||++++.++++++++|++++++| ++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 430 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999998 999999753346999999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|||+++|+++|||+++|||+|.+++++++
T Consensus 431 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 461 (516)
T 1uzb_A 431 FAEALEVANDTPYGLTGGVYSRKREHLEWAR 461 (516)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 9999999999999999999999999998874
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-93 Score=734.03 Aligned_cols=416 Identities=28% Similarity=0.432 Sum_probs=391.5
Q ss_pred CCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 18 PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 18 ~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
+...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp GGCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 34567899999985 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCC-CCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|++++++|+|||+.+++.|+..+++.+++++...+.+.+...+.. .++...+++++|+|||++|+|||||+...+++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRS 163 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999888776655432 23466788999999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhH-HHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLIT-IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~-~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
+++||++||+||+|||+.+|+++ ..+ .++|.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|
T Consensus 164 ~~~ALaaGN~VVlKps~~tp~~~~~~l----~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i 239 (485)
T 4dng_A 164 IAPAIALGNSVVHKPDIQTAISGGTII----AKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHI 239 (485)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHTHHH----HHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHH----HHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHH
Confidence 99999999999999999999999 764 6778999999999999999 56799999999999999999999999999
Q ss_pred HHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 253 ~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++.++++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 240 ~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~ 319 (485)
T 4dng_A 240 GEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQ 319 (485)
T ss_dssp HHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCT
T ss_pred HHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
.++++++||+++..+.+++.+++++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|++
T Consensus 320 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 396 (485)
T 4dng_A 320 TDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQ 396 (485)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHH
T ss_pred CcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999976 6999999999 899999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||+++|||+|.+++++++
T Consensus 397 eAi~~an~~~~gL~a~v~t~d~~~a~~~~ 425 (485)
T 4dng_A 397 EAIDMANDTEYGLSSAVFTSDLEKGEKFA 425 (485)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 99999999999999999999999999875
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-93 Score=733.72 Aligned_cols=415 Identities=26% Similarity=0.469 Sum_probs=394.4
Q ss_pred CCCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 18 PETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 18 ~~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
.+..++||||+|+. ++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 34567999999985 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCC-CCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE-RPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|+++++.|+|||..+++.|+..+++.+++++...+...+ ..+.. .++...++.++|+|||++|+|||||+...+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRS 168 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999988877665 44432 24567788999999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhH-HHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLIT-IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~-~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
+++||++||+||+|||+.+|+++ ..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~~l----~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i 244 (508)
T 3r64_A 169 VAPALAVGNAVVIKPASDTPVTGGVIP----ARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRV 244 (508)
T ss_dssp HHHHHHTTCEEEEECCTTCHHHHTHHH----HHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHH
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHH----HHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHH
Confidence 99999999999999999999999 764 6778999999999999999 68999999999999999999999999999
Q ss_pred HHHhhc--cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccC
Q 013505 253 QQTVHQ--RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIG 330 (441)
Q Consensus 253 ~~~a~~--~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 330 (441)
++.+++ +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 245 ~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 324 (508)
T 3r64_A 245 GELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTG 324 (508)
T ss_dssp HHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 331 DPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 331 ~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+|.++++++||++++.+++++++++++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (508)
T 3r64_A 325 DPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD 401 (508)
T ss_dssp CTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCC
Confidence 99999999999999999999999999999999999999975 6899999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||++||||+|.+++++++
T Consensus 402 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 432 (508)
T 3r64_A 402 EAHAAELANASDFGLSAAVWSKDIDRAAQFA 432 (508)
T ss_dssp HHHHHHHHTSSSCCSCEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999875
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-93 Score=739.60 Aligned_cols=426 Identities=25% Similarity=0.377 Sum_probs=394.3
Q ss_pred HHHhccCCCCCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHH
Q 013505 10 FLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIG 88 (441)
Q Consensus 10 ~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 88 (441)
++++++.....+++||||+|+.++..+.++||.| |+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|++++
T Consensus 53 a~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a 132 (563)
T 4e3x_A 53 ALKDLKGQTEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAA 132 (563)
T ss_dssp HHHTTTTCCEECCEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCccCCeEECCEEeecCCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 4455666666789999999998777888999998 799999999999999999999999999999999999999999999
Q ss_pred HHHHhh-HHHHHHHHHHHhCCChhhhhHH-HHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCc
Q 013505 89 DALREK-LHHLGRLLSIEMGKILPEGIGE-VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNF 166 (441)
Q Consensus 89 ~~l~~~-~~~la~~~~~e~Gk~~~~a~~e-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 166 (441)
+.|+++ +++|+++++.|+|||+.+++.+ +..+++.+++++...+++.+.......++...+.++.|+|||++|+||||
T Consensus 133 ~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNf 212 (563)
T 4e3x_A 133 DMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNF 212 (563)
T ss_dssp HHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSC
T ss_pred HHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchH
Confidence 999999 9999999999999999999887 99999999999999888766433222223345566778899999999999
Q ss_pred hHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCC
Q 013505 167 PCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGS 245 (441)
Q Consensus 167 P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs 245 (441)
|+....+++++|| +||+||+|||+.+|+++..+ .++|.++|+|+|++|+|+| +.++++.|++||+|++|+||||
T Consensus 213 P~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l----~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGS 287 (563)
T 4e3x_A 213 TAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAV----YRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGS 287 (563)
T ss_dssp HHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESC
T ss_pred HHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHH----HHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECC
Confidence 9999999999999 59999999999999999875 6678899999999999999 6789999999999999999999
Q ss_pred hHHHHHHHHHhhccCCc------eeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHH
Q 013505 246 TKVGLMVQQTVHQRFGK------CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQ 319 (441)
Q Consensus 246 ~~~g~~i~~~a~~~~~~------~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~ 319 (441)
+.+|+.|++.++++++| +++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++||+|+++
T Consensus 288 t~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~ 367 (563)
T 4e3x_A 288 VPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGR 367 (563)
T ss_dssp HHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHH
Confidence 99999999999988884 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCC-CCCCCccCCCCChhHHHHHHHHHHHHHH-CCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccc
Q 013505 320 LVDVYKQVKIGDP-LEKGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEE 396 (441)
Q Consensus 320 l~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~v~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE 396 (441)
|+++++++++|+| .|+++++||++++.+++++.++|+++++ +|+++++||...+..|+|++|||+ +++++|++++||
T Consensus 368 l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eE 447 (563)
T 4e3x_A 368 LLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEE 447 (563)
T ss_dssp HHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSC
T ss_pred HHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCC
Confidence 9999999999999 9999999999999999999999999996 899999999876668999999999 899999999999
Q ss_pred cccceEEEEEeCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHhhh
Q 013505 397 LFAPVLYVMKFQT--FEEAVKIN-NSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 397 ~fgPv~~v~~~~~--~~eai~~~-n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||++|++|+| ++|||+++ |+++|||+++|||+|.++++++.
T Consensus 448 iFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~ 494 (563)
T 4e3x_A 448 IFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEAT 494 (563)
T ss_dssp CCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHH
T ss_pred CcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHH
Confidence 9999999999997 79999999 79999999999999999887763
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-92 Score=727.29 Aligned_cols=414 Identities=26% Similarity=0.446 Sum_probs=392.0
Q ss_pred CceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHH
Q 013505 22 GCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGR 100 (441)
Q Consensus 22 ~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 100 (441)
++||||+|+. .+.++.++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++
T Consensus 7 ~~~I~G~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 86 (490)
T 3ju8_A 7 THYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELAR 86 (490)
T ss_dssp CEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CceECCEEecCCCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999987 456899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhc
Q 013505 101 LLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALV 180 (441)
Q Consensus 101 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALa 180 (441)
+++.|+|||+.+++.|+..+++.+++++...+...+...+.. ++...+.+++|+|||++|+|||||+...++++++||+
T Consensus 87 ~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 165 (490)
T 3ju8_A 87 VIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALL 165 (490)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHH
Confidence 999999999999999999999999999988877766543321 2344566799999999999999999999999999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccC
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~ 260 (441)
+||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.+.++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 166 aGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~ 241 (490)
T 3ju8_A 166 AGNCVVFKPSELTPKVAELT----LKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQP 241 (490)
T ss_dssp HTCEEEEECCTTCHHHHHHH----HHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCT
T ss_pred cCCeEEEECCCCCcHHHHHH----HHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccC
Confidence 99999999999999999875 66788899999999999998899999999999999999999999999999999999
Q ss_pred Cce-eecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEeccc-HHHHHHHHHHHHHhhccCC-CCCCCC
Q 013505 261 GKC-LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESI-YQTVLDQLVDVYKQVKIGD-PLEKGT 337 (441)
Q Consensus 261 ~~~-~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-p~~~~~ 337 (441)
+|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.++.+
T Consensus 242 ~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~ 321 (490)
T 3ju8_A 242 QKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAP 321 (490)
T ss_dssp TSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCC
T ss_pred CCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcC
Confidence 998 7999999999999999999999999999999999999999999999996 9999999999999999999 999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHH
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKIN 417 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~ 417 (441)
++||++++.+++++.+++++++++|+++++||...+.+|+|++|||+.++++|++++||+||||++|++|+|++|||+++
T Consensus 322 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~a 401 (490)
T 3ju8_A 322 FMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREA 401 (490)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999876668999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEecCCHHHHHhhh
Q 013505 418 NSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 418 n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|||+++|||+|.+++++++
T Consensus 402 N~~~~gL~a~v~t~d~~~a~~~~ 424 (490)
T 3ju8_A 402 NATQYGLAAGLLSDSRERFEQFL 424 (490)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHH
T ss_pred hcCCCCceEEEEcCCHHHHHHHH
Confidence 99999999999999999998874
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-93 Score=730.04 Aligned_cols=412 Identities=26% Similarity=0.492 Sum_probs=387.8
Q ss_pred CCCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 19 ETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 19 ~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
.++++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|.++|
T Consensus 3 ~~~~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 82 (475)
T 1euh_A 3 KQYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKI 82 (475)
T ss_dssp CBCCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cccceeECCEEecCCCceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 34578999999874449999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCC----cee-EEEEeccceEEEEcCCCchHHhHHH
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPN----HMM-LETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
+++++.|+|||+.+++.|+..+++.+++++...+++.+...+...++ ... +..++|+|||++|+|||||+...++
T Consensus 83 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (475)
T 1euh_A 83 GAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGS 162 (475)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHH
Confidence 99999999999999999999999999999988877655543322233 355 8899999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|
T Consensus 163 ~~~~ALaaGN~vVlKps~~tp~t~~~l----~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i 238 (475)
T 1euh_A 163 KIAPALIAGNVIAFKPPTQGSISGLLL----AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238 (475)
T ss_dssp HHHHHHHTTCEEEEECCSTTHHHHHHH----HHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCEEEEeCCCcChHHHHHH----HHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHH
Confidence 999999999999999999999999976 5567789999999999999 57789999999999999999999999999
Q ss_pred HHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 253 QQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 253 ~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 239 ~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 316 (475)
T 1euh_A 239 GKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP 316 (475)
T ss_dssp HHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCG
T ss_pred HHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCc
Confidence 99887 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
++ ++++||+++..+++++++++++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+|+|
T Consensus 317 ~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ 392 (475)
T 1euh_A 317 ED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 392 (475)
T ss_dssp GG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred cc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHH
Confidence 99 999999999999999999999999999999999975 5899999999 799999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||+++|||+|.+++++++
T Consensus 393 eai~~an~~~~gL~a~v~t~d~~~~~~~~ 421 (475)
T 1euh_A 393 EAIEISNKSEYGLQASIFTNDFPRAFGIA 421 (475)
T ss_dssp HHHHHHHHSSEESEEEEECSCHHHHHHHH
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHH
Confidence 99999999999999999999999998875
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-93 Score=728.85 Aligned_cols=400 Identities=25% Similarity=0.424 Sum_probs=381.9
Q ss_pred eEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh
Q 013505 35 TVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI 114 (441)
Q Consensus 35 ~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 114 (441)
+++++||+||+++++++.++.+|+++++++|++||+.|+.+++.+|.++|+++++.|++++++|+++++.|+|||+.+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCCh
Q 013505 115 GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTP 194 (441)
Q Consensus 115 ~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p 194 (441)
.|+..+++.+++++...+++.+...+.. ++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 9999999999999998888766554432 455778899999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeE
Q 013505 195 LITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAI 273 (441)
Q Consensus 195 ~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~ 273 (441)
+++..+ .+++.++|+|+|++|+|+| +.++++ |+.||+|++|+||||+.+|+.|++.++++++|+++|||||||+
T Consensus 164 ~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~ 238 (484)
T 3ros_A 164 GSAALT----AKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAF 238 (484)
T ss_dssp HHHHHH----HHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEE
T ss_pred HHHHHH----HHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcc
Confidence 999875 5667888999999999999 566777 9999999999999999999999999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHH
Q 013505 274 IIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEK 353 (441)
Q Consensus 274 iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~ 353 (441)
||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||+++..+++++++
T Consensus 239 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~ 318 (484)
T 3ros_A 239 IVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEA 318 (484)
T ss_dssp EECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHH
T ss_pred eeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCC
Q 013505 354 GIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRS 432 (441)
Q Consensus 354 ~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d 432 (441)
+|++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 319 ~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 398 (484)
T 3ros_A 319 QVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSD 398 (484)
T ss_dssp HHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSC
T ss_pred HHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 9999999999999999876668999999999 799999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh
Q 013505 433 PENIFKWL 440 (441)
Q Consensus 433 ~~~~~~~~ 440 (441)
.+++++++
T Consensus 399 ~~~a~~~~ 406 (484)
T 3ros_A 399 IDRAKKVS 406 (484)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-93 Score=731.50 Aligned_cols=417 Identities=28% Similarity=0.489 Sum_probs=391.2
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
..+++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|++
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKE 83 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999986 45789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
+|++++++|+|||+.+++.|+..+++.+++++...+...+...+...++...+..++|+|||++|+|||||+...+++++
T Consensus 84 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 163 (486)
T 1t90_A 84 ELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFP 163 (486)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHH
Confidence 99999999999999999999999999999998777766655433212344567889999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 164 ~ALaaGN~VVlKps~~tp~t~~~l----~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~a 239 (486)
T 1t90_A 164 MAIALGNTFILKPSERTPLLTEKL----VELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKG 239 (486)
T ss_dssp HHHHTTCEEEEECCSSSCHHHHHH----HHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHH
Confidence 999999999999999999999876 5667889999999999999778999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcce-EEEecccHHHHHHHHHHHHHhhccCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRR-LLIHESIYQTVLDQLVDVYKQVKIGDPLEK 335 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 335 (441)
+++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|+++
T Consensus 240 a~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 240 SENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp HHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred hccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 9999999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHH
Q 013505 336 GTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413 (441)
Q Consensus 336 ~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ea 413 (441)
++++||+++..+++++.+++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|++||
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~ea 398 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEA 398 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999999999997432 36899999999 79999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 414 i~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|+++|+++|||+++|||+|.+++++++
T Consensus 399 i~~aN~~~~gL~a~v~t~d~~~a~~~~ 425 (486)
T 1t90_A 399 IEIANKSEFANGACLFTSNSNAIRYFR 425 (486)
T ss_dssp HHHHHHSSEESEEEEECCBHHHHHHHH
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHH
Confidence 999999999999999999999998874
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-93 Score=730.88 Aligned_cols=412 Identities=26% Similarity=0.461 Sum_probs=388.8
Q ss_pred CCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-HhhCCCHHHHHHHHHHHHHHHHhhHHHH
Q 013505 20 TPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGEVVRQIGDALREKLHHL 98 (441)
Q Consensus 20 ~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l 98 (441)
..++||||+|+.+..+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|+++|
T Consensus 18 ~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 97 (501)
T 1uxt_A 18 VYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVF 97 (501)
T ss_dssp EECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccceeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 346899999987557899999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCC--CC--CceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 99 GRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE--RP--NHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 99 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
+++++.|+|||+.+++.|+..+++.+++++...+++.+..++.. .. +...++.++|+|||++|+|||||+...+++
T Consensus 98 a~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (501)
T 1uxt_A 98 AEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNK 177 (501)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999998888766554432 12 235688899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
+++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.++++.|++||+|++|+||||+.+|+.|++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l----~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~ 253 (501)
T 1uxt_A 178 ITYSFIYGNAVVVKPSISDPLPAAMA----VKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVK 253 (501)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHH----HHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999976 56678899999999999994489999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++ ++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|||.+
T Consensus 254 ~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 331 (501)
T 1uxt_A 254 VGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRD 331 (501)
T ss_dssp HHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccc
Confidence 887 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCC-ceEeeEEE-EcC---CCCCccccccccceEEEEEeCC
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEG-NFVQPTIV-EIS---PTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptvl-~~~---~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+++++||++++.++++++++|++++++|+++++||.. .| +|++|||+ +++ ++|++++||+||||++|++|+|
T Consensus 332 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~ 408 (501)
T 1uxt_A 332 PTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKD 408 (501)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCC
Confidence 9999999999999999999999999999999999975 58 99999999 799 9999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||||+++|+++|||++||||+|.+++++++
T Consensus 409 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 439 (501)
T 1uxt_A 409 LDQAIELANGRPYGLDAAVFGRDVVKIRRAV 439 (501)
T ss_dssp HHHHHHHHHTSSEESEEEEECCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEeCCCHHHHHHHH
Confidence 9999999999999999999999999998874
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-92 Score=725.69 Aligned_cols=413 Identities=26% Similarity=0.456 Sum_probs=389.1
Q ss_pred CCCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 19 ETPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 19 ~~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.+
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 85 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKD 85 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4567999999986 56899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhh-hHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHh
Q 013505 97 HLGRLLSIEMGKILPEG-IGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNA 175 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i 175 (441)
+|+++++.|+|||+.++ ..|+..+++.+++++...+...+... ....+..++|+|||++|+|||||+...++++
T Consensus 86 ~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 160 (478)
T 3ty7_A 86 DIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKL 160 (478)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 78999999999999988877655431 2346788999999999999999999999999
Q ss_pred hhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHH
Q 013505 176 CIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQ 254 (441)
Q Consensus 176 ~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 254 (441)
++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++
T Consensus 161 ~~ALaaGN~VVlKps~~tp~t~~~l----~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~ 236 (478)
T 3ty7_A 161 AAAFAAGSPVVLKPSEETPFAAVIL----AEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236 (478)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHH----HHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--C
T ss_pred HHHHHcCCeEEEECCCcchHHHHHH----HHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999876 5667788999999999999 7899999999999999999999999999999
Q ss_pred HhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCC
Q 013505 255 TVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 255 ~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|++
T Consensus 237 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 316 (478)
T 3ty7_A 237 KAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRE 316 (478)
T ss_dssp STTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTS
T ss_pred HHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcc-cC--CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSV-IE--SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~-~~--~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
+++++||+++..+++++++++++++++|+++++||.. .+ ..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 317 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 317 DGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 9999999999999999999999999999999999943 22 36999999999 79999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|||+++|+++|||+++|||+|.+++++++
T Consensus 397 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~ 426 (478)
T 3ty7_A 397 DEAIQIANDTKYGLAGYVIGKDKETLHKVA 426 (478)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 999999999999999999999999998874
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-90 Score=711.26 Aligned_cols=404 Identities=26% Similarity=0.469 Sum_probs=384.4
Q ss_pred CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChh
Q 013505 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (441)
Q Consensus 32 ~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (441)
+..+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCC
Q 013505 112 EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAP 191 (441)
Q Consensus 112 ~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~ 191 (441)
+++.|+..+++.+++++...+.+.+.. +...++...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999998888766554 2223455678899999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCC
Q 013505 192 TTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN 271 (441)
Q Consensus 192 ~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~ 271 (441)
.+|.++..+ .+++.++|+|+|++|+|+|+.+.+..|+.||+|+.|+||||+.+|+.|++.++++++|+++|+||||
T Consensus 164 ~tp~~~~~l----~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~ 239 (462)
T 3etf_A 164 NVTGCAQMI----ARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSD 239 (462)
T ss_dssp TCHHHHHHH----HHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCE
T ss_pred CCcHHHHHH----HHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCC
Confidence 999999875 6678899999999999999888899999999999999999999999999999999999999999999
Q ss_pred eEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHH
Q 013505 272 AIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNF 351 (441)
Q Consensus 272 ~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~ 351 (441)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEec
Q 013505 352 EKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFT 430 (441)
Q Consensus 352 ~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t 430 (441)
.+++++++++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999999999876668999999999 8999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhh
Q 013505 431 RSPENIFKWL 440 (441)
Q Consensus 431 ~d~~~~~~~~ 440 (441)
+|.+++++++
T Consensus 400 ~d~~~a~~~~ 409 (462)
T 3etf_A 400 ADDTLAAEMA 409 (462)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999998874
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-90 Score=751.78 Aligned_cols=425 Identities=30% Similarity=0.513 Sum_probs=398.5
Q ss_pred HHhccCC-CCCCCceecCeeccCCCeEeeecCCC-CceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHH
Q 013505 11 LSEIGLS-PETPGCFVNGKWKAHGPTVSSINPVN-NQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIG 88 (441)
Q Consensus 11 ~~~~~~~-~~~~~~~I~g~~~~~~~~~~~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 88 (441)
++.+... ....++||||+|+.++.+++++||+| |+++++++.++.+|+++|+++|++||+.|+.+|+.+|.++|++++
T Consensus 521 ~~~~~~~~~~~~~~~I~G~~~~~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~A 600 (1026)
T 4f9i_A 521 IAQVRTQLGKTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAA 600 (1026)
T ss_dssp HHHHHTTCCEEECEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHhhccccccCceECCEEecCCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHH
Confidence 3444443 35678999999998888999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchH
Q 013505 89 DALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPC 168 (441)
Q Consensus 89 ~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 168 (441)
+.|++++++|+++++.|+|||+.++..|+..+++.++|++...+.+.+...+...++...+..++|+|||++|+|||||+
T Consensus 601 dll~~~~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl 680 (1026)
T 4f9i_A 601 QAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPL 680 (1026)
T ss_dssp HHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTT
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHH
Confidence 99999999999999999999999999999999999999999988876654433234556778899999999999999999
Q ss_pred HhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChH
Q 013505 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTK 247 (441)
Q Consensus 169 ~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~ 247 (441)
...++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.
T Consensus 681 ~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l----~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~ 756 (1026)
T 4f9i_A 681 AISMGMASAAIVTGNCVVFKPSGITSIIGWHL----VELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSME 756 (1026)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH----HHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCccchHHHHHH----HHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHH
Confidence 99999999999999999999999999999875 6678899999999999999 778999999999999999999999
Q ss_pred HHHHHHHHhh------ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHH
Q 013505 248 VGLMVQQTVH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLV 321 (441)
Q Consensus 248 ~g~~i~~~a~------~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~ 321 (441)
+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||++++|+|+++|+
T Consensus 757 vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~ 836 (1026)
T 4f9i_A 757 TGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLV 836 (1026)
T ss_dssp HHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHH
Confidence 9999999988 4789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccc
Q 013505 322 DVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAP 400 (441)
Q Consensus 322 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgP 400 (441)
++++++++|+|.++++++||+++..+.+++.++|++++++| ++++||...+..|+|++|||+ +++++|++++||+|||
T Consensus 837 ~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGP 915 (1026)
T 4f9i_A 837 SMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGP 915 (1026)
T ss_dssp HHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCc
Confidence 99999999999999999999999999999999999999998 999999765545999999999 7999999999999999
Q ss_pred eEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 401 VLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 401 v~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++|++|+|++|||+++|+++|||+++|||+|.++++++.
T Consensus 916 Vl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~ 955 (1026)
T 4f9i_A 916 VLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKAR 955 (1026)
T ss_dssp EEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHH
Confidence 9999999999999999999999999999999999998874
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-90 Score=705.63 Aligned_cols=402 Identities=25% Similarity=0.390 Sum_probs=377.1
Q ss_pred CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChh
Q 013505 32 HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILP 111 (441)
Q Consensus 32 ~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 111 (441)
++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|+++|.++|+++++.|++|+++|+++++.|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 5678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhcCc-cccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecC
Q 013505 112 EGIGEVQEVIDMCDFAVGLSRQLNGS-VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGA 190 (441)
Q Consensus 112 ~a~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps 190 (441)
++..|+...++.+++++......... ......++......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 55679999999999988877664432 23333345556677899999999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCC
Q 013505 191 PTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGN 270 (441)
Q Consensus 191 ~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~ 270 (441)
+.+|.++..+ .+++.++|+|+|++|+++|+.+.+..|+.| +++|+||||+.+|+.|++.++++++|+++|||||
T Consensus 163 ~~tp~~~~~l----~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk 236 (474)
T 4h7n_A 163 EIAPRFVAPL----LMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGK 236 (474)
T ss_dssp TTSCTTHHHH----HHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCC
T ss_pred ccCchHHHHH----Hhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCc
Confidence 9999998875 567889999999999999988999999986 9999999999999999999999999999999999
Q ss_pred CeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHH
Q 013505 271 NAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKN 350 (441)
Q Consensus 271 ~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~ 350 (441)
||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||+++..+.++
T Consensus 237 ~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~ 316 (474)
T 4h7n_A 237 DPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGI 316 (474)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHH
T ss_pred CccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCEEEecCcccC-CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEE
Q 013505 351 FEKGIENIKSQGGKILTGGSVIE-SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSI 428 (441)
Q Consensus 351 ~~~~v~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv 428 (441)
+.+++++++++|+++++||...+ ..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 317 v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 396 (474)
T 4h7n_A 317 INDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAV 396 (474)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEE
Confidence 99999999999999999998644 56899999999 89999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHhhh
Q 013505 429 FTRSPENIFKWL 440 (441)
Q Consensus 429 ~t~d~~~~~~~~ 440 (441)
||+|.+++++++
T Consensus 397 ~t~d~~~a~~~a 408 (474)
T 4h7n_A 397 FAGSEDEALKVA 408 (474)
T ss_dssp ECSSHHHHHHHH
T ss_pred EeCCHHHHHHHH
Confidence 999999999875
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-88 Score=706.52 Aligned_cols=411 Identities=22% Similarity=0.309 Sum_probs=373.3
Q ss_pred CCCceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHH-hHHhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 20 TPGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEA-SKIWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 20 ~~~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
..++||||+|+. ++.+++++||+||+++++++.++ +|+++|+++|++| |+.|+.+|..+|.++|+++++.|++|+++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 7 LLKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp ECCEEETTEEECCSSSCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhhEECCEEecCCCCeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 467999999986 34679999999999999999988 8999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcC-------ccccCCCCCc-eeEEEEecc-ceEEEEcCCCchH
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNG-------SVIPSERPNH-MMLETWNPL-GVVGVITAFNFPC 168 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~P~-Gvv~~i~p~n~P~ 168 (441)
|++++++|+|||+.+++.|+..+++.+++++...+.+.+ ...+...++. ..+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 999999999999999999999999999999988766543 1112221222 356788997 9999999999999
Q ss_pred HhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcC-CCCceEEEecC-CHHHHHHHHcC-CCccEEEeeCC
Q 013505 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNK-LPGAIFTSFCG-GAEIGQAIAKD-PRISLVSFTGS 245 (441)
Q Consensus 169 ~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~ag-lP~gvv~~v~g-~~~~~~~L~~~-~~v~~v~ftGs 245 (441)
.+.++++++||++||+||+|||+.+|+++..+ .+++.++| +|+|++|+|+| +.+ +..+ +++++|+||||
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l----~~l~~~aG~lP~gvv~vv~g~~~~----l~~~l~~vd~V~FTGS 237 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRM----VADVVDAGILPPGALSIICGSSAG----LLDQIRSFDVVSFTGS 237 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH----HHHHHHHTCSCTTSEEECCSCCTT----SGGGCCTTCEEEEESC
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHH----HHHHHHhCCCCCCeEEEEeCChHH----HHhcccccCEEEEECC
Confidence 99999999999999999999999999999876 56678899 79999999998 443 3343 57999999999
Q ss_pred hHHHHHHHHHhh--ccCCceeecCCCCCeEEEeCCC-----CHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHH
Q 013505 246 TKVGLMVQQTVH--QRFGKCLLELSGNNAIIIMDDA-----DIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (441)
Q Consensus 246 ~~~g~~i~~~a~--~~~~~~~lelgG~~~~iV~~da-----dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (441)
+.+|+.|++.++ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 238 ~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 317 (534)
T 2y53_A 238 ADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLE 317 (534)
T ss_dssp HHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHH
Confidence 999999998875 8899999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCccc-----C-CCCceEeeEEE-EcCCC--
Q 013505 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVI-----E-SEGNFVQPTIV-EISPT-- 389 (441)
Q Consensus 319 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~-----~-~~g~~~~Ptvl-~~~~~-- 389 (441)
+|+++++++++|+|+++++++||++++.++++++++|+++ .+|+++++||+.. + ..|+|++|||+ +++++
T Consensus 318 ~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~ 396 (534)
T 2y53_A 318 ALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNA 396 (534)
T ss_dssp HHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGC
T ss_pred HHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCcccc
Confidence 9999999999999999999999999999999999999999 6899999999742 1 35899999999 78876
Q ss_pred CCccccccccceEEEEEeC---CH-----HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 390 ADIVKEELFAPVLYVMKFQ---TF-----EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 390 ~~i~~eE~fgPv~~v~~~~---~~-----~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.+++++++
T Consensus 397 ~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 455 (534)
T 2y53_A 397 TLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLA 455 (534)
T ss_dssp SSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHH
T ss_pred CHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHH
Confidence 6899999999999999999 99 999999999999999999999999998874
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-87 Score=697.97 Aligned_cols=419 Identities=19% Similarity=0.209 Sum_probs=378.1
Q ss_pred hHHHHHhccCCCCCCCceecCeeccCCCeEeeecCCCCceEE-EEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHH
Q 013505 7 EYEFLSEIGLSPETPGCFVNGKWKAHGPTVSSINPVNNQKIA-TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVR 85 (441)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~ 85 (441)
|-.-|+.+.+++...++||||+|+.+.. ++||+||++++ +++.++.+|+++++++|++||+.|+.++..+|.++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~I~G~~~~~~~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~ 92 (528)
T 3v4c_A 16 ENLYFQSMMIFTPKGKHLVAGEWLDGAG---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLR 92 (528)
T ss_dssp -------CCSCCCCCCEEETTEEECCSS---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ccHHHHHhhhcccccCceECCEEecCCC---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 3445777888888889999999987554 99999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhh--hcCccc----cCC--CCCceeEEEEeccce
Q 013505 86 QIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ--LNGSVI----PSE--RPNHMMLETWNPLGV 157 (441)
Q Consensus 86 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~--~~~~~~----~~~--~~~~~~~~~~~P~Gv 157 (441)
++++.|++|+++|+++++.|+|||+.+++.|+..+++.+++++...+. ..+... +.. .++...+..++|+||
T Consensus 93 ~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 172 (528)
T 3v4c_A 93 AIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGP 172 (528)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSC
T ss_pred HHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcE
Confidence 999999999999999999999999999999999999999999988876 222221 111 122346788999999
Q ss_pred EEEEcCCCchHHhHH--HHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcC
Q 013505 158 VGVITAFNFPCAVLG--WNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKD 234 (441)
Q Consensus 158 v~~i~p~n~P~~~~~--~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~ 234 (441)
|++|+|||||+...+ +++++||++||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+| +.++++.|+.|
T Consensus 173 v~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~ 252 (528)
T 3v4c_A 173 VAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQH 252 (528)
T ss_dssp EEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHC
T ss_pred EEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhC
Confidence 999999999999854 899999999999999999999999999999999999999999999999999 78999999999
Q ss_pred CCccEEEeeCChHHHHHHHHHhhccC--CceeecCCCCCeEEEeCCC---CHHHHHHHHHHHHHhcCCCCccCcceEEEe
Q 013505 235 PRISLVSFTGSTKVGLMVQQTVHQRF--GKCLLELSGNNAIIIMDDA---DIKLAVRSVLFAAVGTAGQRCTTCRRLLIH 309 (441)
Q Consensus 235 ~~v~~v~ftGs~~~g~~i~~~a~~~~--~~~~lelgG~~~~iV~~da---dl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~ 309 (441)
|+|++|+||||+.+|+.|++.+++++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||
T Consensus 253 p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~ 332 (528)
T 3v4c_A 253 PHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVI 332 (528)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEE
T ss_pred CCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEe
Confidence 99999999999999999999999998 9999999999999999999 889999999999999999999999999999
Q ss_pred cc-cHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcC
Q 013505 310 ES-IYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EIS 387 (441)
Q Consensus 310 ~~-i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~ 387 (441)
++ +||+|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+ +++
T Consensus 333 ~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~ 400 (528)
T 3v4c_A 333 EGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTG 400 (528)
T ss_dssp SSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEH
T ss_pred cccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecC
Confidence 97 9999999999999988643 67899998887777777653 479999999975 7999999999 677
Q ss_pred CC---CCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecC--CHHHHHhhh
Q 013505 388 PT---ADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTR--SPENIFKWL 440 (441)
Q Consensus 388 ~~---~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~--d~~~~~~~~ 440 (441)
++ |++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++|+
T Consensus 401 ~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a 458 (528)
T 3v4c_A 401 AQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLR 458 (528)
T ss_dssp HHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHH
T ss_pred cccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHH
Confidence 76 899999999999999999999999999999999999999999 888888774
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-85 Score=666.16 Aligned_cols=392 Identities=21% Similarity=0.277 Sum_probs=348.4
Q ss_pred CeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhh
Q 013505 34 PTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG 113 (441)
Q Consensus 34 ~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 113 (441)
..++++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|+++++.|+|||..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-HHHHHHHHHHHHHHHhhhhhcCc-cccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEec
Q 013505 114 I-GEVQEVIDMCDFAVGLSRQLNGS-VIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKG 189 (441)
Q Consensus 114 ~-~ev~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkp 189 (441)
+ .|+..+++.+++++...+.+.+. ..+.. ..+...+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 59999999999999887765432 12111 12446788899999999999999999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCC
Q 013505 190 APTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSG 269 (441)
Q Consensus 190 s~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG 269 (441)
|+.+|+++..+++ ++.++ +|+|++|+|+|+.+.++.|++ ++|++|+||||+.+|+.|++.++++++|+++||||
T Consensus 166 s~~tp~t~~~l~~----l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGG 239 (457)
T 3lns_A 166 SETTPETSAVIEK----IIAEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGG 239 (457)
T ss_dssp CTTCHHHHHHHHH----HHHHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CCCChHHHHHHHH----HHHHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCC
Confidence 9999999998755 45555 999999999998889999998 78999999999999999999999999999999999
Q ss_pred CCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHH
Q 013505 270 NNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRK 349 (441)
Q Consensus 270 ~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~ 349 (441)
|||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||++++.+++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 7766 999999999999
Q ss_pred HHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhc-CCCCcEEE
Q 013505 350 NFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNS-VPQGLSSS 427 (441)
Q Consensus 350 ~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~-~~~gl~as 427 (441)
+++++++++ ++++++||... ..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+ ++|||+++
T Consensus 315 rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~ 390 (457)
T 3lns_A 315 RLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390 (457)
T ss_dssp HHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEE
T ss_pred HHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEE
Confidence 999999986 35999999753 36899999999 89999999999999999999999999999999999 99999999
Q ss_pred EecCCHHHHHhhh
Q 013505 428 IFTRSPENIFKWL 440 (441)
Q Consensus 428 v~t~d~~~~~~~~ 440 (441)
|||+|.+++++++
T Consensus 391 v~t~d~~~a~~~~ 403 (457)
T 3lns_A 391 VFGKDMDVAKGII 403 (457)
T ss_dssp EECSCHHHHHHHH
T ss_pred EECCCHHHHHHHH
Confidence 9999999999875
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-84 Score=673.48 Aligned_cols=395 Identities=19% Similarity=0.268 Sum_probs=364.8
Q ss_pred CCCeEeeecCCCCceE-EEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh
Q 013505 32 HGPTVSSINPVNNQKI-ATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL 110 (441)
Q Consensus 32 ~~~~~~~~~P~tg~~i-~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 110 (441)
++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++|+++|+++++.|+|||.
T Consensus 5 ~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 84 (510)
T 1ez0_A 5 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE 84 (510)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 4568999999999999 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhh--hcCccc----cCCCC-C-ceeEEEEeccceEEEEcCCCchHHhH--HHHhhhhhc
Q 013505 111 PEGIGEVQEVIDMCDFAVGLSRQ--LNGSVI----PSERP-N-HMMLETWNPLGVVGVITAFNFPCAVL--GWNACIALV 180 (441)
Q Consensus 111 ~~a~~ev~~~~~~~~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~i~~ALa 180 (441)
.+++.|+..+++.+++++...+. ..+..+ +...+ + ...+..++|+|||++|+|||||+... ++++++||+
T Consensus 85 ~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALa 164 (510)
T 1ez0_A 85 VRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 164 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHH
Confidence 99999999999999999988775 333222 11111 1 13577899999999999999999984 499999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (441)
+||+||+|||+.+|+++..+++++.++|.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|++.++++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 244 (510)
T 1ez0_A 165 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 244 (510)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999 888999999999999999999999999999999988
Q ss_pred C--CceeecCCCCCeEEEeCCCCHH--HHHHHHHHHHHhcCCCCccCcceEEEecc-cHHHHHHHHHHHHHhhccCCCCC
Q 013505 260 F--GKCLLELSGNNAIIIMDDADIK--LAVRSVLFAAVGTAGQRCTTCRRLLIHES-IYQTVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 260 ~--~~~~lelgG~~~~iV~~dadl~--~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~~ 334 (441)
+ +|+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++
T Consensus 245 l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----- 319 (510)
T 1ez0_A 245 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP----- 319 (510)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC-----
T ss_pred CCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC-----
Confidence 6 9999999999999999999999 99999999999999999999999999999 999999999999998863
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHH-CCCEEEecCcccCCCCceEeeEEE-EcCCC---CCccccccccceEEEEEeCC
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKS-QGGKILTGGSVIESEGNFVQPTIV-EISPT---ADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~---~~i~~eE~fgPv~~v~~~~~ 409 (441)
||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+ +++++ |++++||+||||++|++|+|
T Consensus 320 -----gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~ 390 (510)
T 1ez0_A 320 -----STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN 390 (510)
T ss_dssp -----BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESS
T ss_pred -----CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCC
Confidence 688899999999999999994 7999999996 3899999999 67766 99999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCH--HHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSP--ENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~--~~~~~~~ 440 (441)
++|||+++|+++|||++||||+|. +++++++
T Consensus 391 ~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~ 423 (510)
T 1ez0_A 391 VADMLSLSEMLAGSLTATIHATEEDYPQVSQLI 423 (510)
T ss_dssp HHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHH
Confidence 999999999999999999999997 6777764
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-83 Score=655.51 Aligned_cols=377 Identities=21% Similarity=0.327 Sum_probs=342.7
Q ss_pred cCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHH
Q 013505 51 VEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVG 129 (441)
Q Consensus 51 ~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~ 129 (441)
...+.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|+++++.|+|||..+++ .|+..+++.+++++.
T Consensus 13 ~~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 13 RGSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp -----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3456779999999999999999999999999999999999999999999999999999999997 589999998888876
Q ss_pred hhhhhcCccccC---CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHH
Q 013505 130 LSRQLNGSVIPS---ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSE 206 (441)
Q Consensus 130 ~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~ 206 (441)
....+....... .......++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++ +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~----~ 168 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLA----T 168 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHH----H
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHH----H
Confidence 655432211110 112345778899999999999999999999999999999999999999999999998865 4
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHH
Q 013505 207 VFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (441)
Q Consensus 207 ~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~ 286 (441)
++.++ +|+|++|+|+|+.+.+..|+.| +|++|+||||+.+|+.|++.++++++|+++|||||||+||++|||++.|++
T Consensus 169 l~~~a-lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~ 246 (469)
T 3sza_A 169 IIPQY-LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACR 246 (469)
T ss_dssp HHHHH-SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHH
T ss_pred HHHHh-CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHH
Confidence 55666 9999999999977777788888 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEE
Q 013505 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (441)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~ 366 (441)
.+++++|.|+||.|++++|||||+++||+|+++|+++++++ .|+|.++++++||+++..+++++.++| +|++++
T Consensus 247 ~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~ 320 (469)
T 3sza_A 247 RIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVA 320 (469)
T ss_dssp HHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEE
T ss_pred HHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEE
Confidence 99999999999999999999999999999999999999998 699999999999999999999999998 699999
Q ss_pred ecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 367 TGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 367 ~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+||... ..|+|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 321 ~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~ 394 (469)
T 3sza_A 321 YGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMI 394 (469)
T ss_dssp ECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHH
T ss_pred eCCccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHH
Confidence 999863 47999999999 89999999999999999999999999999999999999999999999999998874
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-80 Score=672.59 Aligned_cols=382 Identities=27% Similarity=0.424 Sum_probs=356.9
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHH
Q 013505 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVG 129 (441)
Q Consensus 50 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~ 129 (441)
++.++.+|+++|+++|++||+.|+.+|+.+|.++|+++++.|+++.++|+++++.|+|||+.++..|+..+++.++|++.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCccccC-CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHH
Q 013505 130 LSRQLNGSVIPS-ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVF 208 (441)
Q Consensus 130 ~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l 208 (441)
..+...+..... ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+ .+++
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l----~ell 699 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREA----VALL 699 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHH----HHHH
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHH----HHHH
Confidence 888765543221 12345677889999999999999999999999999999999999999999999999876 5667
Q ss_pred HhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc---CCceeecCCCCCeEEEeCCCCHHHH
Q 013505 209 ERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR---FGKCLLELSGNNAIIIMDDADIKLA 284 (441)
Q Consensus 209 ~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~---~~~~~lelgG~~~~iV~~dadl~~a 284 (441)
.++|+|+|++|+|+| +.+ ++.|+.||+|++|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|
T Consensus 700 ~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~A 778 (1001)
T 3haz_A 700 HEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQV 778 (1001)
T ss_dssp HHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHH
T ss_pred HHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHH
Confidence 888999999999999 555 99999999999999999999999999998864 7999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCE
Q 013505 285 VRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGK 364 (441)
Q Consensus 285 a~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~ 364 (441)
++.+++|+|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+.+++.++|++++++| +
T Consensus 779 a~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~ 857 (1001)
T 3haz_A 779 ADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-R 857 (1001)
T ss_dssp HHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-E
T ss_pred HHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-e
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999888 8
Q ss_pred EEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 365 ILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQT--FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 365 v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~--~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+ +||... ..|+|++|||+.. +++++++||+||||++|++|++ ++|||+++|+++|||+++|||+|.+++++++
T Consensus 858 v-~gg~~~-~~G~fv~PTvl~~-~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a 932 (1001)
T 3haz_A 858 L-HFAGPA-PEGCFVAPHIFEL-TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAII 932 (1001)
T ss_dssp E-EEECCC-CSSSCCCCEEEEC-SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHH
T ss_pred E-eccccC-CCCcEEeeEEecC-CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHH
Confidence 8 888764 3599999999964 6788999999999999999997 7999999999999999999999999998874
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-75 Score=592.85 Aligned_cols=370 Identities=16% Similarity=0.197 Sum_probs=328.7
Q ss_pred EEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-HHHHHHHHHHHH
Q 013505 49 TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMCDFA 127 (441)
Q Consensus 49 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~ 127 (441)
.++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|+++.++|+++++.|+||+..+++. +....++.+..+
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~ 84 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNY 84 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHh
Confidence 4566788999999999999999999999999999999999999999999999999999999988753 333444444333
Q ss_pred HHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHH
Q 013505 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (441)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~ 207 (441)
....+ ..+. +. ..++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.++
T Consensus 85 ~~~~~-~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~ 161 (464)
T 3k9d_A 85 IKDMK-TIGM-LK-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEA 161 (464)
T ss_dssp HTTCC-CSEE-EE-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhccc-ccce-ec-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHH
Confidence 22111 1111 11 123456778899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCC-CCCeEEEeCCCCHHHHH
Q 013505 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELS-GNNAIIIMDDADIKLAV 285 (441)
Q Consensus 208 l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelg-G~~~~iV~~dadl~~aa 285 (441)
+.++|+|+|++|+|+| +.+.++.|++||+|++|+||||+.+ .+.+++++||+ +|+| ||+|+||++|||++.|+
T Consensus 162 ~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa 236 (464)
T 3k9d_A 162 AEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAV 236 (464)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHH
T ss_pred HHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHH
Confidence 9999999999999999 8899999999999999999999984 55566788998 7888 99999999999999999
Q ss_pred HHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHH-------HhhccCCCC-CCCCccCCCCChhHHHHHHHHHHH
Q 013505 286 RSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVY-------KQVKIGDPL-EKGTLLGPLHTPESRKNFEKGIEN 357 (441)
Q Consensus 286 ~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~v~~ 357 (441)
+.+++|+|+|+||.|++++|||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.
T Consensus 237 ~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~ 316 (464)
T 3k9d_A 237 KHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGL 316 (464)
T ss_dssp HHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999885 567899988 778999999999999999999999
Q ss_pred HHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHH----HHHhcCCCCcEEEEecCCH
Q 013505 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAV----KINNSVPQGLSSSIFTRSP 433 (441)
Q Consensus 358 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai----~~~n~~~~gl~asv~t~d~ 433 (441)
++.+|+++++||.. ++++++++. +|+||||++|++|+|++||| +++|+++|||+++|||+|.
T Consensus 317 a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~ 382 (464)
T 3k9d_A 317 TVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDK 382 (464)
T ss_dssp CCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred hhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCH
Confidence 99999999999863 356778765 89999999999999999997 7999999999999999999
Q ss_pred HHHHhhh
Q 013505 434 ENIFKWL 440 (441)
Q Consensus 434 ~~~~~~~ 440 (441)
+++++|+
T Consensus 383 ~~a~~~~ 389 (464)
T 3k9d_A 383 EIIREFA 389 (464)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-75 Score=592.43 Aligned_cols=357 Identities=16% Similarity=0.163 Sum_probs=292.1
Q ss_pred eeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh-------CCC
Q 013505 37 SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEM-------GKI 109 (441)
Q Consensus 37 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk~ 109 (441)
-++||+||+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hh----hhhHHHHHHHHHHHHHHHhhhhhcCccccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCC
Q 013505 110 LP----EGIGEVQEVIDMCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGN 183 (441)
Q Consensus 110 ~~----~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN 183 (441)
+. ++..|+..+++.+++++...++..+...+.. .++...++.++|+|||++|+||| |.... +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 97 5778999999999999987776665543321 12345678899999999999887 77766 79999999999
Q ss_pred EEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCce
Q 013505 184 CVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKC 263 (441)
Q Consensus 184 ~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~ 263 (441)
+||+|||+.+|+++..+++++.++|.++| |+|++|+|+|+.++++.|+.||+|++|+||||+.+|+.|++.++ ++|+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 99999999999999999999999888889 99999999997778999999999999999999999999999887 8999
Q ss_pred eecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCC
Q 013505 264 LLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343 (441)
Q Consensus 264 ~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~ 343 (441)
++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++|| ||+
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~- 297 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL- 297 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-
Confidence 99999999999999999999999999999999 999999999999999998 333
Q ss_pred ChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCC
Q 013505 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQG 423 (441)
Q Consensus 344 ~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~g 423 (441)
+++++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 298 -------~~~~i~~~~~~Ga~v~~G~~~-~~~g~~~-------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~g 362 (463)
T 2h5g_A 298 -------FDQIIDMLRVEQVKIHAGPKF-ASYLTFS-------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSS 362 (463)
T ss_dssp -------HHHHHHHHHHTTCEEEECHHH-HC----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCS
T ss_pred -------HHHHHHHHHhCCCEEEeCCcc-cccCccC-------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCC
Confidence 334588888999999855432 2345553 5789999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHhhh
Q 013505 424 LSSSIFTRSPENIFKWL 440 (441)
Q Consensus 424 l~asv~t~d~~~~~~~~ 440 (441)
|+++|||+|.+++++|+
T Consensus 363 Laa~v~t~d~~~a~~~~ 379 (463)
T 2h5g_A 363 HTDVIVTEDENTAEFFL 379 (463)
T ss_dssp SEEEEECSCHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHH
Confidence 99999999999999874
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-74 Score=586.32 Aligned_cols=364 Identities=18% Similarity=0.207 Sum_probs=317.8
Q ss_pred EcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhH-HHHHHHHHH-HHH
Q 013505 50 VVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG-EVQEVIDMC-DFA 127 (441)
Q Consensus 50 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~-~~~ 127 (441)
++.++.+|+++++++|++||+.|+.+|.++|.++|+++++.|++++++|+++++.|+|||..+++. ++..+++.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999875 666666666 333
Q ss_pred HHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHH
Q 013505 128 VGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEV 207 (441)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~ 207 (441)
.. ....+. ++ ..++...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 81 ~~--~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--cccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 22 111111 11 112344678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHH
Q 013505 208 FERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVR 286 (441)
Q Consensus 208 l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~ 286 (441)
+.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+++ .+++++||+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 9999999999999999 889999999999999999999998654 45667899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEE
Q 013505 287 SVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKIL 366 (441)
Q Consensus 287 ~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~ 366 (441)
.++.|+|+|+||.|++++|||||+++||+|+++|+++ +||++++.+.++++++++++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 9999999999999999999999999999999999775 389999999999999998766677776
Q ss_pred ecCccc---CCCCceEeeEE-------E-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCC----CCcEEEEecC
Q 013505 367 TGGSVI---ESEGNFVQPTI-------V-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVP----QGLSSSIFTR 431 (441)
Q Consensus 367 ~gg~~~---~~~g~~~~Ptv-------l-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~----~gl~asv~t~ 431 (441)
+||... +..|+|++||+ + ++++++++.+ |+||||++|++|+|++|||+++|++. |||+++|||+
T Consensus 297 ~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~ 375 (452)
T 3my7_A 297 VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTN 375 (452)
T ss_dssp TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESC
T ss_pred ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcC
Confidence 466532 13589999997 5 5788888875 89999999999999999999999985 9999999999
Q ss_pred CHHHHHh
Q 013505 432 SPENIFK 438 (441)
Q Consensus 432 d~~~~~~ 438 (441)
|.+++++
T Consensus 376 d~~~a~~ 382 (452)
T 3my7_A 376 QDVNADR 382 (452)
T ss_dssp TTTCHHH
T ss_pred CHHHHHH
Confidence 9887766
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-73 Score=580.08 Aligned_cols=348 Identities=17% Similarity=0.204 Sum_probs=296.5
Q ss_pred HHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh----hhhh-HHHHH-HHHHHHHHHHh
Q 013505 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI-GEVQE-VIDMCDFAVGL 130 (441)
Q Consensus 57 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~ev~~-~~~~~~~~~~~ 130 (441)
.+++++++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+|||. .++. .|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999998 8885 78888 88889988887
Q ss_pred hhhhc------CccccCC-C-CCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHH
Q 013505 131 SRQLN------GSVIPSE-R-PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202 (441)
Q Consensus 131 ~~~~~------~~~~~~~-~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~ 202 (441)
.+.+. +...+.. . .+...+..++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 77654 3322211 1 1345678899999999999999 9 8999999999999999999999999999999999
Q ss_pred HHHHHHHh----cCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCC
Q 013505 203 LVSEVFER----NKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (441)
Q Consensus 203 li~~~l~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~d 278 (441)
++.++|.+ +|+|+|++|+|+++.++++.|+.||+|++|+||||+.+|+.|++.+ ++|+++|+|||||+||++|
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~d 249 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDED 249 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECTT
T ss_pred HHHHHHHhhchhcCCCCCcEEEECCHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECCC
Confidence 99888899 9999999999994347899999999999999999999999999876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhcc---CCCCCCCCccCCCCChhHHHHHHHH-
Q 013505 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI---GDPLEKGTLLGPLHTPESRKNFEKG- 354 (441)
Q Consensus 279 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~- 354 (441)
||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+ +++
T Consensus 250 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~ 310 (468)
T 1vlu_A 250 ADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAY 310 (468)
T ss_dssp CCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hccc
Confidence 9999999999999999999 99999999999999 9999999999999987 87633 444
Q ss_pred HHHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHH
Q 013505 355 IENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434 (441)
Q Consensus 355 v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~ 434 (441)
+++++ ++++||+ | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 311 i~~a~----~~~~gG~-----g--~~Ptvl-v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 378 (468)
T 1vlu_A 311 FDKLN----ELGKLTE-----A--IQCKTV-DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKA 378 (468)
T ss_dssp HHHHH----HHTCCCH-----H--HHTTBC--------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHH
T ss_pred ccccc----eeeccCC-----C--CCCcee-eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 66665 3566774 4 688888 8889999999999999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 013505 435 NIFKWL 440 (441)
Q Consensus 435 ~~~~~~ 440 (441)
++++++
T Consensus 379 ~a~~~~ 384 (468)
T 1vlu_A 379 NAEKFM 384 (468)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-70 Score=556.02 Aligned_cols=340 Identities=17% Similarity=0.219 Sum_probs=289.9
Q ss_pred HHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh----hhhh--------HHHHHHHH
Q 013505 55 LEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVID 122 (441)
Q Consensus 55 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~~ 122 (441)
.+|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|+++++.|+||+. .+++ .++..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999984 4555 37889999
Q ss_pred HHHHHHHhhhhhcCccccC--CCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHH
Q 013505 123 MCDFAVGLSRQLNGSVIPS--ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200 (441)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l 200 (441)
.+++++.+.+.. +...+. ...+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 999998876543 333322 113456788999999999999998 8 58889999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEecC-CH-HHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCC
Q 013505 201 TKLVSEVFERNKLPGAIFTSFCG-GA-EIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (441)
Q Consensus 201 ~~li~~~l~~aglP~gvv~~v~g-~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~d 278 (441)
++++.++|.++|+|+|++|+|+| +. ++++.|..||+|++|+||||+.+|+.+++.+ ++|+++|||||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 99999999999999999999998 65 5788888999999999999999999998876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhcc---CCCCCCCCccCCCCChhHHHHHHHHH
Q 013505 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKI---GDPLEKGTLLGPLHTPESRKNFEKGI 355 (441)
Q Consensus 279 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~v 355 (441)
||++.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..+++
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHH
Confidence 9999999999999999999 9999999999999999999999999999988 7652 13556
Q ss_pred HHHHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHH
Q 013505 356 ENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPEN 435 (441)
Q Consensus 356 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~ 435 (441)
+++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++
T Consensus 321 ~~a~-~--------------G------~~-~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~ 378 (444)
T 4ghk_A 321 EAAG-V--------------G------PL-VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDR 378 (444)
T ss_dssp HHTT-C--------------C------CC-EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHH
T ss_pred Hhcc-c--------------C------cc-cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 5542 1 2 11 34678999999999999999999999999999999999999999999999
Q ss_pred HHhhh
Q 013505 436 IFKWL 440 (441)
Q Consensus 436 ~~~~~ 440 (441)
+++++
T Consensus 379 a~~~a 383 (444)
T 4ghk_A 379 AMRFL 383 (444)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98875
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-70 Score=554.73 Aligned_cols=339 Identities=22% Similarity=0.310 Sum_probs=299.2
Q ss_pred CHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh----hhhh--------HHHHHHH
Q 013505 54 SLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL----PEGI--------GEVQEVI 121 (441)
Q Consensus 54 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~ev~~~~ 121 (441)
..+++++++++|++||+.|+.+|+.+|.++|+++++.|++|+++|+++++.|+||+. .++. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 456899999999999999999999999999999999999999999999999999985 5553 6899999
Q ss_pred HHHHHHHHhhhhhcCccccCC--CCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHH
Q 013505 122 DMCDFAVGLSRQLNGSVIPSE--RPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 199 (441)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~ 199 (441)
+.+++++...+. .+...+.. ..+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++..
T Consensus 92 ~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 92 KACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 999999987654 33332211 12344678899999999999886 46888999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCceEEEecC-C-HHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeC
Q 013505 200 ITKLVSEVFERNKLPGAIFTSFCG-G-AEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMD 277 (441)
Q Consensus 200 l~~li~~~l~~aglP~gvv~~v~g-~-~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~ 277 (441)
+++++.++|.++|+|+|++|+|+| + .+.++.|..||+|++|+||||+.+|+.|++.+ .+|+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999999999999999999999998 5 46788999999999999999999999999887 599999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHH
Q 013505 278 DADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIEN 357 (441)
Q Consensus 278 dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~ 357 (441)
|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 246 dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------
T ss_pred CCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------
Confidence 99999999999999999999 99999999999999999999999999987542
Q ss_pred HHHCCCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013505 358 IKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437 (441)
Q Consensus 358 a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~ 437 (441)
+.||.+. .| |+ |||. +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 298 --------~~gg~~~--~~-~~-Ptl~--~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 363 (427)
T 1o20_A 298 --------VRGCEKT--RE-IV-PDVV--PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 363 (427)
T ss_dssp --------EEECHHH--HH-HS-TTSE--ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred --------eecChhh--hh-hC-Cccc--CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHH
Confidence 2233321 12 33 8863 456889999999999999999999999999999999999999999999998
Q ss_pred hhh
Q 013505 438 KWL 440 (441)
Q Consensus 438 ~~~ 440 (441)
+++
T Consensus 364 ~~~ 366 (427)
T 1o20_A 364 KFV 366 (427)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=93.20 E-value=6.7 Score=38.25 Aligned_cols=163 Identities=19% Similarity=0.239 Sum_probs=94.8
Q ss_pred CCCceeEEEEeccceEEEEcCCC---chHHhHHHHhhhhhcCCCE--EEEecCCCChhhHHHHHHHHHHHHHhcCCCCce
Q 013505 143 RPNHMMLETWNPLGVVGVITAFN---FPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVSEVFERNKLPGAI 217 (441)
Q Consensus 143 ~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~i~~ALaaGN~--VVlkps~~~p~~~~~l~~li~~~l~~aglP~gv 217 (441)
.++...-.++.|+--|++..|.- ||- ++++..+||-.+|+. |+.-|++........ .-+...+|+.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~i-----L~AA~l~Gv~--- 188 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRGELNALV-----LAAAYISGVD--- 188 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGGCCCHHH-----HHHHHHHTCC---
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCCCccHHH-----HHHHHhcCCc---
Confidence 35556667889999999999944 654 455578999999986 344554332222221 2234556664
Q ss_pred EEEec-CCHHHHHHHHc----CCCccEEEeeCChHHHHHHHHHhhccCCceeecC-CCCCeEEE--eCCCCHHHHHHHHH
Q 013505 218 FTSFC-GGAEIGQAIAK----DPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLEL-SGNNAIII--MDDADIKLAVRSVL 289 (441)
Q Consensus 218 v~~v~-g~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lel-gG~~~~iV--~~dadl~~aa~~i~ 289 (441)
.+.. ||.+.-.+|.- -|+||+|+=.|+.-+...=+.-. +.+-..+ -|.+=++| ++++|.+.++..++
T Consensus 189 -eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~~a~p~~vAaDLl 263 (423)
T 4gic_A 189 -RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDGRTDPDWIAMDLF 263 (423)
T ss_dssp -EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECSCSCHHHHHHHHH
T ss_pred -EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCCCCCHHHHHHHHH
Confidence 3333 56655555554 67899999888876543322221 2333332 24444443 44689999888877
Q ss_pred HHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHh
Q 013505 290 FAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQ 326 (441)
Q Consensus 290 ~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~ 326 (441)
.-+=... ..+.++|..+ ++|.+++.+.+.+
T Consensus 264 sQAEHd~-----~a~~iLvT~s--~~la~~V~~~i~~ 293 (423)
T 4gic_A 264 SQAEHDE-----DAQAILISPD--AAHLEAVQASIER 293 (423)
T ss_dssp HHHTTCT-----TCEEEEEESC--HHHHHHHHHHHHH
T ss_pred HhhccCC-----CCeEEEEeCc--HHHHHHHHHHHHH
Confidence 5544332 2445667655 4455554444433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 441 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-102 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-101 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-95 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-84 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-71 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 5e-68 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-61 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-52 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-32 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 8e-31 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 4e-21 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 311 bits (798), Expect = e-102
Identities = 123/427 (28%), Positives = 194/427 (45%), Gaps = 14/427 (3%)
Query: 23 CFVNGKWK--AHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPA 77
F+N +W T ++NP + I V E ED ++ +KA A ++ W + A
Sbjct: 16 IFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDA 75
Query: 78 PKRGEVVRQIGDALREKLHHLGRLLSIEMGK-ILPEGIGEVQEVIDMCDFAVGLSRQLNG 136
RG ++ ++ D + +L L +++ GK + + ++ V+ + G + + +G
Sbjct: 76 SHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHG 135
Query: 137 SVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLI 196
IP + + P+GV G I +NFP + W AL GN VV K A TPL
Sbjct: 136 KTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 194
Query: 197 TIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQT 255
+ + L + P + G G G AIA + V+FTGST++G ++Q
Sbjct: 195 ALYVANL----IKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVA 250
Query: 256 VHQRFGK-CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
K LEL G + IIM DAD+ AV FA GQ R + E IY
Sbjct: 251 AGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYD 310
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
+++ V K +G+P + T GP K I K +G K+L GG +
Sbjct: 311 EFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD 370
Query: 375 EGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
G F+QPT+ + I KEE+F PV+ ++KF+T EE V N+ GL++++FT+
Sbjct: 371 RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDL 430
Query: 434 ENIFKWL 440
+
Sbjct: 431 DKANYLS 437
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 308 bits (789), Expect = e-101
Identities = 125/426 (29%), Positives = 200/426 (46%), Gaps = 14/426 (3%)
Query: 24 FVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKI---WMELPAP 78
F+N +W + G NP +K+ V E ED ++ +KA +A +I W + A
Sbjct: 17 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 76
Query: 79 KRGEVVRQIGDALREKLHHLGRLLSIEMGKIL-PEGIGEVQEVIDMCDFAVGLSRQLNGS 137
+RG ++ ++ D + L + ++ GK+ + ++ I + G + ++ G
Sbjct: 77 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 136
Query: 138 VIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLIT 197
IP + N P+GV G I +NFP + W AL CGN VV K A TPL
Sbjct: 137 TIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTA 195
Query: 198 IAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256
+ + L+ E P + G G G AI+ + V+FTGST+VG ++++
Sbjct: 196 LHMGSLIKEA----GFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAA 251
Query: 257 HQRFGK-CLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQT 315
+ K LEL G + I+ DAD+ AV GQ C RL + ESIY
Sbjct: 252 GKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDE 311
Query: 316 VLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE 375
+ + V+ K+ +G+PL G GP E + IE+ K +G K+ GG ++
Sbjct: 312 FVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNK 371
Query: 376 GNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
G F+QPT+ ++ I KEE+F PV +MKF++ ++ +K N+ GLS+ IFT +
Sbjct: 372 GYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDID 431
Query: 435 NIFKWL 440
Sbjct: 432 KAITVS 437
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 293 bits (751), Expect = 4e-95
Identities = 110/427 (25%), Positives = 187/427 (43%), Gaps = 15/427 (3%)
Query: 24 FVNGKW---KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKR 80
+ G+ K T P + + +V E+ ++ +++ A W ++ +R
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIER 82
Query: 81 GEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP 140
V+ + +RE+ ++ +L I GK + E ++ ++ GL+
Sbjct: 83 SRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPT-LSGQHI 141
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
PLGV I A+N+P + W AL CGN VV+K +P TP+ + +
Sbjct: 142 QLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVIL 201
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
++ E +P + GGAE G + P ++ VSFTGS G V + +
Sbjct: 202 AEIFHEAG----VPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
LEL G + ++I D +++ AVR L A T GQ CT R+ + I L+++
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE------S 374
V K + +GDPL T +G L + + K +G ++L GG +
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 375 EGNFVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
G F+ P +++ VKEE+F PV+ V+ F T EE ++ N+ GL+S +FTR
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDI 437
Query: 434 ENIFKWL 440
+
Sbjct: 438 SRAHRVA 444
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 265 bits (677), Expect = 1e-84
Identities = 113/422 (26%), Positives = 182/422 (43%), Gaps = 8/422 (1%)
Query: 23 CFVNGKW-KAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRG 81
+NG+ G NP + + EAS E + ++A A W + R
Sbjct: 5 LLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRA 64
Query: 82 EVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP- 140
E + ++ D + E L S GK L + I + + +
Sbjct: 65 ECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAG 124
Query: 141 SERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAI 200
H + +PLGVV I +N+P + W AL GNCVV K + TPL + +
Sbjct: 125 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKL 184
Query: 201 TKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRF 260
+L ++F G + F G +G + P++ +VS TGS G +
Sbjct: 185 AELAKDIFP----AGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSI 240
Query: 261 GKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQL 320
+ +EL G +I+ DDADI+ V V AGQ CT R+ + IY T++++L
Sbjct: 241 KRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKL 300
Query: 321 VDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFV 379
+K G P ++ T LGPL + + K +E K+ G K++TGG + G +
Sbjct: 301 GAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYY 360
Query: 380 QPTIVEISPTAD-IVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFK 438
PT++ + D IV++E+F PV+ V F E+ V N GL+SS++T+ +
Sbjct: 361 APTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHR 420
Query: 439 WL 440
Sbjct: 421 VS 422
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 231 bits (590), Expect = 1e-71
Identities = 105/424 (24%), Positives = 200/424 (47%), Gaps = 17/424 (4%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEV 83
+VNG+WK + P + ++ +V S E+ + + +A W L +R
Sbjct: 7 YVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAY 66
Query: 84 VRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSV----- 138
+ ++ D L +G +LS E+ K + EV ++ ++A ++ G V
Sbjct: 67 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 126
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ + + P+G+V I+ FN+P + G AL+ GN + +K + +
Sbjct: 127 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 186
Query: 199 AITKLVSEVFERNKLP-GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257
+ + +E LP G T G+EIG I + ++ ++FTGST +G + +
Sbjct: 187 LLAEAFAEAG----LPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 242
Query: 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVL 317
R +LEL G ++ I+++DAD++L ++++ A G +GQRCT +R+L+ ES+ ++
Sbjct: 243 MRP--IMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV 300
Query: 318 DQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGN 377
+++ + + IG+P + + K+ + I K T + I+ EGN
Sbjct: 301 EKIREKVLALTIGNPEDDAD----ITPLIDTKSADYVEGLINDANDKGATALTEIKREGN 356
Query: 378 FVQPTIVE-ISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
+ P + + ++ + EE F PVL +++ + EEA++I+N GL +SIFT
Sbjct: 357 LICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRA 416
Query: 437 FKWL 440
F
Sbjct: 417 FGIA 420
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 223 bits (568), Expect = 5e-68
Identities = 119/427 (27%), Positives = 210/427 (49%), Gaps = 16/427 (3%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQK-IATVVEASLEDYEEGMKACSEASKIWMELPAPKRGE 82
++ G+W + S+NP + + T +A + E ++A +A K W + P R
Sbjct: 41 YIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSR 100
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQ-LNGSVIPS 141
++ + +R + L L E+GK E +V E ID ++ + + +V
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 142 ERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAIT 201
P + PLG VI +NFP A+ + GN V+ K A ++ +
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 202 KLVSEVFERNKLP-GAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ-- 258
E+F P G + G E+G + + PRI ++FTGS +VGL + + +
Sbjct: 221 ----EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 259 ----RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQ 314
F + +E G NAII+ + AD LA V+ +A G GQ+C+ RL++ + Y+
Sbjct: 277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYE 336
Query: 315 TVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIES 374
VL++++ +++ +G P E+ LGP+ + E + IE K++G +++ GG +E
Sbjct: 337 PVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG 394
Query: 375 EGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSP 433
EG F+ PT+ E+ P A I +EE+F PVL V++ + F EA+++ N P GL+ +++R
Sbjct: 395 EGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKR 454
Query: 434 ENIFKWL 440
E++
Sbjct: 455 EHLEWAR 461
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 205 bits (522), Expect = 2e-61
Identities = 99/424 (23%), Positives = 183/424 (43%), Gaps = 13/424 (3%)
Query: 24 FVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGE 82
++ G+W G + +P++ IA V+ S E+ E + + + ++P +R
Sbjct: 20 YLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLA 79
Query: 83 VVRQIGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDF----AVGLSRQLNGSV 138
V+R+ D + L +L + GK +GEV+ +D +
Sbjct: 80 VLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGD 139
Query: 139 IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITI 198
+ L PLGVV IT FN+P + + GN VV K + + PL
Sbjct: 140 WTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAA 199
Query: 199 AITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQ 258
K + + + + I D R++ VSFTGST+VG V +
Sbjct: 200 MAVKALLDAGFPPD----AIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGGV 255
Query: 259 RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
+ ++EL G + I+++DAD+ LA + AGQRC + +L +Y +++
Sbjct: 256 KQ--YVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVE 313
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESE--G 376
++ +++GDP + +GPL +P + IE+ +GG++L GG +
Sbjct: 314 EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQ 373
Query: 377 NFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENI 436
+ + + K E+FAPV ++ + ++A+++ N P GL +++F R I
Sbjct: 374 PTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKI 433
Query: 437 FKWL 440
+ +
Sbjct: 434 RRAV 437
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 180 bits (456), Expect = 2e-52
Identities = 75/387 (19%), Positives = 152/387 (39%), Gaps = 18/387 (4%)
Query: 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEG-IGEV 117
+ +K EA R + + + + E L + L+ ++GK EV
Sbjct: 3 SDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEV 62
Query: 118 QEVIDMCDFAVGLSRQLNGSVI---PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174
V++ D + + + PLGVV VI A+N+P +
Sbjct: 63 AHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQP 122
Query: 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKD 234
A+ GN V+ K + + + + L+ + ++N
Sbjct: 123 MVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTE------LLK 176
Query: 235 PRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVG 294
R + +TGST VG +V + LEL G + + D D+ +A R + +
Sbjct: 177 ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM 236
Query: 295 TAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKG 354
+GQ C +L SI ++++ + + G+ ++ G + + +
Sbjct: 237 NSGQTCVAPDYILCDPSIQNQIVEK-LKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGL 295
Query: 355 IENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEA 413
I+N K G ++ PTI+ ++ P + +++EE+F PV+ ++ ++ EEA
Sbjct: 296 IDNQKVAHGGTWDQS------SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEA 349
Query: 414 VKINNSVPQGLSSSIFTRSPENIFKWL 440
++ N + L+ +F+ + + I K +
Sbjct: 350 IQFINQREKPLALYVFSNNEKVIKKMI 376
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 125 bits (313), Expect = 2e-32
Identities = 58/397 (14%), Positives = 124/397 (31%), Gaps = 56/397 (14%)
Query: 56 EDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIG 115
++ E K EA + ++ + +++I + L E+ + I++ K G+
Sbjct: 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 60
Query: 116 E------------VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITA 163
E + E+I C+ +GL + + R + + + + +
Sbjct: 61 ESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRV-PIGPIGII 119
Query: 164 FNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG 223
+ V +AL GN ++ +G AI + E + ++P +
Sbjct: 120 YESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIP--ESSVEFI 177
Query: 224 GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKL 283
+ + R+ + G + V +LE N I +D++
Sbjct: 178 ENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLK 237
Query: 284 AVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLH 343
V+ A C +LL+HE I + L +V+ ++ + + T
Sbjct: 238 KAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPD 297
Query: 344 TPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLY 403
+ T D E ++
Sbjct: 298 V-----------------------------------------VPATEDDWPTEYLDLIIA 316
Query: 404 VMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440
+ + +EA++ G S SI T + N K++
Sbjct: 317 IKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV 353
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 122 bits (305), Expect = 8e-31
Identities = 71/416 (17%), Positives = 136/416 (32%), Gaps = 24/416 (5%)
Query: 35 TVSSINPVNNQKIATVV-EASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALRE 93
+ N + + + + + A ++ ++ + L KR ++R I L
Sbjct: 4 VFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEA 63
Query: 94 KLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP--------SERPN 145
+ + +E GE+ + + + + P
Sbjct: 64 RSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPK 123
Query: 146 HMMLETWNPLGVVGVITAFNFPCAVLGWNACIA--LVCGNCVVWKGAPTTPLITIAITKL 203
+ LG V V A NFP A A L G V+ KG P + + +
Sbjct: 124 PDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAEC 183
Query: 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGK 262
+ + ++ +LP AIFT G +GQA+ P I V FTGS G + H+R
Sbjct: 184 IEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEP 243
Query: 263 CLL--ELSGNNAIIIMDDADIKLAVRS--VLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318
EL N I A A + + + GQ CT + +
Sbjct: 244 IPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFI 303
Query: 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNF 378
+ + + L + + + + GI+ SQ + +
Sbjct: 304 ETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQ--------AESPCVASA 355
Query: 379 VQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPE 434
+ T E +EE+F P ++ + + + ++ + L+++I +
Sbjct: 356 LFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEED 411
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 93.0 bits (230), Expect = 4e-21
Identities = 60/399 (15%), Positives = 128/399 (32%), Gaps = 48/399 (12%)
Query: 59 EEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE-- 116
++ K +A I + R +++ +I DAL+ H + I++ G+ +
Sbjct: 6 QQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSL 65
Query: 117 -----------VQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFN 165
+ ++ L + + E + + L V ++ F
Sbjct: 66 LKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGV-LLVIFE 124
Query: 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL----PGAIFTSF 221
V+ +++ GN + KG + + K+V++ + + P
Sbjct: 125 SRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLI 184
Query: 222 CGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADI 281
++ + +D I LV GS +V++ L G +I + +DAD+
Sbjct: 185 ETRQDVSDLLDQDEYIDLVVPRGS---NALVRKIKDTTKIPVLGHADGICSIYLDEDADL 241
Query: 282 KLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGP 341
A R L A L I+ + +V LE G +
Sbjct: 242 IKAKRISLDAKTNYPAGCNAMETLL-INPKFSKWW---------EVLENLTLEGGVTIHA 291
Query: 342 LHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPV 401
T + + + + + I + E +F +E +
Sbjct: 292 --TKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDF---------------DKEFLSLD 334
Query: 402 LYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440
L + E A++ N+ + +I T + N K++
Sbjct: 335 LAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFM 373
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 441 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 94.43 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=6.9e-94 Score=739.28 Aligned_cols=416 Identities=29% Similarity=0.522 Sum_probs=394.1
Q ss_pred CCCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhhCCCHHHHHHHHHHHHHHHHhh
Q 013505 20 TPGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREK 94 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~ 94 (441)
..++||||+|+. ++++++++||+||+++++++.++.+|+++||++|++||+ .|+++|.++|.++|+++++.|++|
T Consensus 13 ~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~~~ 92 (494)
T d1bxsa_ 13 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERD 92 (494)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHhC
Confidence 347999999986 678999999999999999999999999999999999996 699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 95 LHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 95 ~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
+++|++++++|+|||..++. .++...++.+++++...+++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 93 ~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 171 (494)
T d1bxsa_ 93 RLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLW 171 (494)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCS-SSEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCC-CCceeEEEEccEEEEEEEeCccchhHHHHH
Confidence 99999999999999999864 6899999999999999888777665543 355778899999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMV 252 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 252 (441)
++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|
T Consensus 172 ~i~~ALaaGN~VVlKpse~tp~~a~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~i 247 (494)
T d1bxsa_ 172 KIGPALSCGNTVVVKPAEQTPLTALHM----GSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLI 247 (494)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHH----HHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCChHHHHHH----HHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHHH
Confidence 999999999999999999999999876 5667788999999999999 78899999999999999999999999999
Q ss_pred HHHhhc-cCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCC
Q 013505 253 QQTVHQ-RFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGD 331 (441)
Q Consensus 253 ~~~a~~-~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 331 (441)
++.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 248 ~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g~ 327 (494)
T d1bxsa_ 248 KEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGN 327 (494)
T ss_dssp HHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSC
T ss_pred HHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeeec
Confidence 998885 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCH
Q 013505 332 PLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 332 p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
|.++++++||++++.++++++++|++|+++|+++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|+
T Consensus 328 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~~ 407 (494)
T d1bxsa_ 328 PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSL 407 (494)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred cCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECCH
Confidence 99999999999999999999999999999999999999877778999999999 89999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+|||+++|+++|||++||||+|.+.+++++
T Consensus 408 ~eai~~~n~~~~gL~a~i~t~d~~~~~~~~ 437 (494)
T d1bxsa_ 408 DDVIKRANNTFYGLSAGIFTNDIDKAITVS 437 (494)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEEEeCCHHHHHHHH
Confidence 999999999999999999999999998874
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=5.7e-93 Score=732.01 Aligned_cols=415 Identities=29% Similarity=0.499 Sum_probs=393.4
Q ss_pred CCceecCeecc--CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH---HhhCCCHHHHHHHHHHHHHHHHhhH
Q 013505 21 PGCFVNGKWKA--HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK---IWMELPAPKRGEVVRQIGDALREKL 95 (441)
Q Consensus 21 ~~~~I~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~ 95 (441)
.++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++++.+|.++|+++++.|++|+
T Consensus 14 ~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~ 93 (494)
T d1o04a_ 14 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 93 (494)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhH
Confidence 46899999986 678999999999999999999999999999999999985 6999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 96 HHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 96 ~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
++|++++++|+|||..++. .++..+++.+++++...+.+.+...+.. .+...+++++|+|||++|+|||||+...+++
T Consensus 94 eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~ 172 (494)
T d1o04a_ 94 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWK 172 (494)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCS-SSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccC-CCceeEEEEecccEEEEECCcccHHHHHHHH
Confidence 9999999999999999985 6999999999999999888777666543 4556778899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|+.|.||||+.+|+.|+
T Consensus 173 ~~~ALaaGN~VVlKps~~~p~~~~~l----~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~ 248 (494)
T d1o04a_ 173 LGPALATGNVVVMKVAEQTPLTALYV----ANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248 (494)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCeEEEeCCCCCcHHHHHH----HHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999875 5667888999999999999 788999999999999999999999999999
Q ss_pred HHhh-ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCC
Q 013505 254 QTVH-QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDP 332 (441)
Q Consensus 254 ~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 332 (441)
+.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++.|.++++.+++|+|
T Consensus 249 ~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p 328 (494)
T d1o04a_ 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNP 328 (494)
T ss_dssp HHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCT
T ss_pred HHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCc
Confidence 8875 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHH
Q 013505 333 LEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFE 411 (441)
Q Consensus 333 ~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~ 411 (441)
.++.+++||++++.++++++++|++|+++|+++++||....++|+|++|||+ +++++|++++||+||||++|++|+|++
T Consensus 329 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~~~ 408 (494)
T d1o04a_ 329 FDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIE 408 (494)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCCHH
Confidence 9999999999999999999999999999999999999887778999999999 799999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 412 EAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 412 eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
|||+++|+++|||++||||+|.+.+++++
T Consensus 409 eai~~an~~~~gL~a~i~s~d~~~~~~~~ 437 (494)
T d1o04a_ 409 EVVGRANNSTYGLAAAVFTKDLDKANYLS 437 (494)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHH
Confidence 99999999999999999999999998874
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=4e-92 Score=726.37 Aligned_cols=416 Identities=27% Similarity=0.495 Sum_probs=392.7
Q ss_pred CCCceecCeecc--CCCeE-eeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHH
Q 013505 20 TPGCFVNGKWKA--HGPTV-SSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLH 96 (441)
Q Consensus 20 ~~~~~I~g~~~~--~~~~~-~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 96 (441)
...+||||+|+. ++.++ +++||+||+++++++.++.+|+++||++|++||+.|+++|..+|.++|+++++.|++|++
T Consensus 19 ~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~e 98 (503)
T d1a4sa_ 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRD 98 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 345799999986 34555 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhh
Q 013505 97 HLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNAC 176 (441)
Q Consensus 97 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~ 176 (441)
+|+++++.|+|||+.++..|+..+++.+++++...+...+...... ++...++.++|+|||++|+|||||+...+++++
T Consensus 99 ela~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~ 177 (503)
T d1a4sa_ 99 NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177 (503)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcchhhhhhhhhhhhcccccccccccccccccccC-CCcccccccccceeeecccCCCChHHHHHHHHH
Confidence 9999999999999999999999999999999998887665544332 355678899999999999999999999999999
Q ss_pred hhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHh
Q 013505 177 IALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTV 256 (441)
Q Consensus 177 ~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 256 (441)
+||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+|+.++++.|++||+|++|+||||+.+|+.|++.+
T Consensus 178 ~ALaaGN~VV~Kps~~~p~~~~~l----~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~a 253 (503)
T d1a4sa_ 178 PALACGNAVVFKPSPMTPVTGVIL----AEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS 253 (503)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHH----HHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCChHHHHHH----HHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHh
Confidence 999999999999999999999876 5667789999999999999889999999999999999999999999999999
Q ss_pred hccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCC
Q 013505 257 HQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKG 336 (441)
Q Consensus 257 ~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 336 (441)
++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|++++.+.++++++|+|.+..
T Consensus 254 a~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~ 333 (503)
T d1a4sa_ 254 AKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTE 333 (503)
T ss_dssp HTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred hhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC------CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCC
Q 013505 337 TLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE------SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 337 ~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~------~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
+++||++++.+++++++++++++++|+++++||.... ..|+|++|||+ +++++|++++||+||||++|++|+|
T Consensus 334 ~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~ 413 (503)
T d1a4sa_ 334 TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDT 413 (503)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred cccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCC
Confidence 9999999999999999999999999999999997532 47899999999 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|||+++|+++|||++||||+|.+.+++++
T Consensus 414 ~~eai~~an~~~~gL~~~i~t~d~~~~~~~~ 444 (503)
T d1a4sa_ 414 EEEVLQRANNTTFGLASGVFTRDISRAHRVA 444 (503)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999874
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.2e-91 Score=716.23 Aligned_cols=415 Identities=28% Similarity=0.488 Sum_probs=383.2
Q ss_pred CCceecCeecc-CCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 21 PGCFVNGKWKA-HGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 21 ~~~~I~g~~~~-~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
.++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++||+.|+++|..+|.++|+++++.|++++++|+
T Consensus 3 ~~l~I~G~~v~~~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela 82 (474)
T d1wnda_ 3 HKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFA 82 (474)
T ss_dssp CCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CccEECCeEeCCCCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHH
Confidence 47899999986 67899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhH-HHHHHHHHHHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhh
Q 013505 100 RLLSIEMGKILPEGIG-EVQEVIDMCDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIA 178 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~A 178 (441)
++++.|+|||+.++.. ++..+...+++++...........+...++...+++++|+|||++|+|||||+...++++++|
T Consensus 83 ~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~A 162 (474)
T d1wnda_ 83 ELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 162 (474)
T ss_dssp HHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHHHH
Confidence 9999999999999965 566666666666655544433333323346677889999999999999999999999999999
Q ss_pred hcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhh
Q 013505 179 LVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVH 257 (441)
Q Consensus 179 LaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~ 257 (441)
|++||+||+|||+.+|+++..++ +++++ ++|+|++|+|+| +.++++.|++||+|++|.||||+.+|+.|.+.++
T Consensus 163 LaaGN~Vv~Kps~~~p~~~~~~~----~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~ 237 (474)
T d1wnda_ 163 LAAGNCVVLKPSEITPLTALKLA----ELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 237 (474)
T ss_dssp HHTTCEEEEECCTTCCHHHHHHH----HHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHhCCCEEEeCCCcCcHHHHHHH----HHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence 99999999999999999998764 44544 599999999999 7889999999999999999999999999999999
Q ss_pred ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCC
Q 013505 258 QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGT 337 (441)
Q Consensus 258 ~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 337 (441)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|++.|+++++++++|+|.++++
T Consensus 238 ~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~ 317 (474)
T d1wnda_ 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDEST 317 (474)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTC
T ss_pred cCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHCCC-EEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHH
Q 013505 338 LLGPLHTPESRKNFEKGIENIKSQGG-KILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVK 415 (441)
Q Consensus 338 ~~gpl~~~~~~~~~~~~v~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~ 415 (441)
.+||+++..+.+++.+++++++.+|+ +++.|+......|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus 318 ~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~ 397 (474)
T d1wnda_ 318 ELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVN 397 (474)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred eecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999998 466666665678999999999 8999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 416 INNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 416 ~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
++|+++|||+++|||+|.+++++++
T Consensus 398 ~an~~~~GL~a~i~t~d~~~~~~~~ 422 (474)
T d1wnda_ 398 WANDSQYGLASSVWTKDVGRAHRVS 422 (474)
T ss_dssp HHHSSSCCSEEEEECSBHHHHHHHH
T ss_pred HHhCCCCCCeEEEEeCCHHHHHHHH
Confidence 9999999999999999999999874
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=8.8e-91 Score=719.30 Aligned_cols=426 Identities=28% Similarity=0.501 Sum_probs=394.5
Q ss_pred HHHHhccCC-CCCCCceecCeeccCCCeEeeecCC-CCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHH
Q 013505 9 EFLSEIGLS-PETPGCFVNGKWKAHGPTVSSINPV-NNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQ 86 (441)
Q Consensus 9 ~~~~~~~~~-~~~~~~~I~g~~~~~~~~~~~~~P~-tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 86 (441)
++++.++.. .+++++||||+|+.+++.+.++||. ||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|++
T Consensus 25 ~~~~~~~~~~~~~~~l~I~G~~v~s~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~ 104 (516)
T d1uzba_ 25 EALRRVREEFGRHYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLK 104 (516)
T ss_dssp HHHHHHHHTTTEEECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeEEcCEEECCCCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 345555544 4678999999999988899999995 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCcccc-CCCCCceeEEEEeccceEEEEcCCC
Q 013505 87 IGDALREKLHHLGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIP-SERPNHMMLETWNPLGVVGVITAFN 165 (441)
Q Consensus 87 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n 165 (441)
+++.|++|+++|+++++.|+|||+.+++.|+.++++.+++++.......+.... ...++...+..++|+|||++|+|||
T Consensus 105 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN 184 (516)
T d1uzba_ 105 AAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWN 184 (516)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccc
Confidence 999999999999999999999999999999999999999999888776554322 2234556678899999999999999
Q ss_pred chHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeC
Q 013505 166 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTG 244 (441)
Q Consensus 166 ~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftG 244 (441)
||+...++++++||++||+||+|||+.+|+++..+ .+++.++|+|+|++|+|+| +.++++.|+.||+|++|.|||
T Consensus 185 ~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l----~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTG 260 (516)
T d1uzba_ 185 FPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKV----FEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTG 260 (516)
T ss_dssp STTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH----HHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEES
T ss_pred cccccccccccchhhhcccccccccchhHHHHHHH----HHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEeccc
Confidence 99999999999999999999999999999999875 6778889999999999999 789999999999999999999
Q ss_pred ChHHHHHHHHHhh------ccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHH
Q 013505 245 STKVGLMVQQTVH------QRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLD 318 (441)
Q Consensus 245 s~~~g~~i~~~a~------~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~ 318 (441)
|+.+|+.|++.++ .++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++
T Consensus 261 s~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~ 340 (516)
T d1uzba_ 261 SLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340 (516)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred chhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhh
Confidence 9999999999887 6789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCcccccc
Q 013505 319 QLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEEL 397 (441)
Q Consensus 319 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~ 397 (441)
++.++++++++| |.++.+++||+++..+.++++++|++|+++|+++ +||...+..|+|++|||+ +++++|++++||+
T Consensus 341 ~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~ 418 (516)
T d1uzba_ 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEI 418 (516)
T ss_dssp HHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCC
T ss_pred HHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCC
Confidence 999999999999 6688899999999999999999999999888655 577666778999999999 7999999999999
Q ss_pred ccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 398 FAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 398 fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||||++|++|+|++|||+++|+++|||++||||+|.+++++++
T Consensus 419 FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~ 461 (516)
T d1uzba_ 419 FGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWAR 461 (516)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHH
T ss_pred cCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999999999999998864
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=9.2e-84 Score=664.71 Aligned_cols=414 Identities=26% Similarity=0.458 Sum_probs=381.9
Q ss_pred CCCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhH-HhhCCCHHHHHHHHHHHHHHHHhhHHH
Q 013505 19 ETPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASK-IWMELPAPKRGEVVRQIGDALREKLHH 97 (441)
Q Consensus 19 ~~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (441)
+.+++||||+|+.++++++++||.||+++++++.++.+|+++|+++|++|++ .|+++|..+|.++|+++++.|++++++
T Consensus 15 ~~~~~~I~G~~~~sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 94 (499)
T d1ky8a_ 15 PVYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 94 (499)
T ss_dssp EEECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCCCEECCeECCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4578999999999999999999999999999999999999999999988877 799999999999999999999999999
Q ss_pred HHHHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCccccC----CCCCceeEEEEeccceEEEEcCCCchHHhHHH
Q 013505 98 LGRLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSVIPS----ERPNHMMLETWNPLGVVGVITAFNFPCAVLGW 173 (441)
Q Consensus 98 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 173 (441)
|++++++|+|||..+++.|+.++++.++|++...+...+..... ...+...+.+|+|+|||++|+|||||+.+.++
T Consensus 95 la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~ 174 (499)
T d1ky8a_ 95 FAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVN 174 (499)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhh
Confidence 99999999999999999999999999999998887765543221 12345677899999999999999999999999
Q ss_pred HhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 174 NACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 174 ~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
++++||++||+||+|||+.+|.++..+ .+++.++|+|+++++++.|+.+.+..|++||+|+.+.||||...++.+.
T Consensus 175 ~~~~ALaaGn~Vi~Kps~~~~~~~~~l----~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~i~ 250 (499)
T d1ky8a_ 175 KITYSFIYGNAVVVKPSISDPLPAAMA----VKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVV 250 (499)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHH----HHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred cchhhhcccccccccccccchhhhhhh----ccccccccccceeeecccCChHHHHHHhhccceeEEEeecccccceEEe
Confidence 999999999999999999999999875 6678889999999999998777889999999999999999999999999
Q ss_pred HHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 254 ~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
+.++ .+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.
T Consensus 251 ~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~ 328 (499)
T d1ky8a_ 251 KVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 328 (499)
T ss_dssp HHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred eccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCC
Confidence 9775 58999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE----EcCCCCCccccccccceEEEEEeCC
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV----EISPTADIVKEELFAPVLYVMKFQT 409 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl----~~~~~~~i~~eE~fgPv~~v~~~~~ 409 (441)
++++++||+++..+.+++++++++|+.+|++++.||..... .+..++++ +++++|++++||+||||++|++|+|
T Consensus 329 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~ 406 (499)
T d1ky8a_ 329 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP--TYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKD 406 (499)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEET--TEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESS
T ss_pred CccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccc--cccccccccccccCCCCChhhhccccCceEEEEEcCC
Confidence 99999999999999999999999999999999999986432 23333333 3568999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 410 FEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 410 ~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
.+|||+++|+++|||++||||+|.+++++++
T Consensus 407 ~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~ 437 (499)
T d1ky8a_ 407 LDQAIELANGRPYGLDAAVFGRDVVKIRRAV 437 (499)
T ss_dssp HHHHHHHHHTSSEESEEEEECCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999874
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=6.4e-81 Score=640.82 Aligned_cols=411 Identities=26% Similarity=0.496 Sum_probs=380.9
Q ss_pred CCCceecCeeccCCCeEeeecCCCCceEEEEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHH
Q 013505 20 TPGCFVNGKWKAHGPTVSSINPVNNQKIATVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLG 99 (441)
Q Consensus 20 ~~~~~I~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 99 (441)
++++||||+|+.++.+++++||+||+++++++.++.+|+++|+++|++|++.|+++|.++|.++|+++++.|++++++|+
T Consensus 3 ~~~n~I~G~~~~~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~la 82 (474)
T d1euha_ 3 QYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIG 82 (474)
T ss_dssp BCCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cccceecCeecCCCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46899999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHhhhhhcCcc-----ccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHH
Q 013505 100 RLLSIEMGKILPEGIGEVQEVIDMCDFAVGLSRQLNGSV-----IPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWN 174 (441)
Q Consensus 100 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 174 (441)
+++++|+|||..+++.|+...++.++++........... ......+...+.+++|+|||++|+|||||+...+++
T Consensus 83 ~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~ 162 (474)
T d1euha_ 83 AILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSK 162 (474)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhh
Confidence 999999999999999999999999998887655433211 111223455678899999999999999999999999
Q ss_pred hhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHH
Q 013505 175 ACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQ 253 (441)
Q Consensus 175 i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 253 (441)
+++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|+++| +.++++.|+.||+|+.|.||||+.+++.++
T Consensus 163 ~~~aL~aGN~vV~Kps~~~~~~~~~l----~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~ 238 (474)
T d1euha_ 163 IAPALIAGNVIAFKPPTQGSISGLLL----AEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIG 238 (474)
T ss_dssp HHHHHHTTCEEEEECCSTTHHHHHHH----HHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred chhhhhccccceecccccchHHHHHH----HHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchh
Confidence 99999999999999999999999875 5678889999999999999 588999999999999999999999999999
Q ss_pred HHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCC
Q 013505 254 QTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPL 333 (441)
Q Consensus 254 ~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 333 (441)
+.++ .+|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++++|++.++++...++.|+|.
T Consensus 239 ~~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~ 316 (474)
T d1euha_ 239 KMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPE 316 (474)
T ss_dssp HHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGG
T ss_pred hhcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcc
Confidence 9876 68999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHH
Q 013505 334 EKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEE 412 (441)
Q Consensus 334 ~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~e 412 (441)
+. ..++|++.....+++.+.+..+...|+..+.++.. .|+|++|||+ .++++|++++||+||||++|++|+|+||
T Consensus 317 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~de 392 (474)
T d1euha_ 317 DD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEE 392 (474)
T ss_dssp GT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHH
T ss_pred cc-cccccccchHHHHHHHHHHHhhhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHH
Confidence 75 45799999999999999999999999888765543 7999999999 7999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 413 AVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 413 ai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
||+++|+++|||+++|||+|.+.+++++
T Consensus 393 ai~~~n~~~~glta~v~s~d~~~~~~~~ 420 (474)
T d1euha_ 393 AIEISNKSEYGLQASIFTNDFPRAFGIA 420 (474)
T ss_dssp HHHHHHHSSEESEEEEECSCHHHHHHHH
T ss_pred HHHHHHCCCCCCeEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999874
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=7.1e-78 Score=619.99 Aligned_cols=395 Identities=18% Similarity=0.238 Sum_probs=344.2
Q ss_pred CCCeEeeecCCCCceEE-EEcCCCHHHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCCh
Q 013505 32 HGPTVSSINPVNNQKIA-TVVEASLEDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKIL 110 (441)
Q Consensus 32 ~~~~~~~~~P~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 110 (441)
++.+|+++||+||+.++ .++.++.+|+++|+++|++||+.|+++|+++|.++|+++++.|++|+++|++++++|+|||+
T Consensus 1 t~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~ 80 (504)
T d1ez0a_ 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPE 80 (504)
T ss_dssp CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred CCCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 46789999999999997 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhcCccc------c--CCCCCceeEEEEeccceEEEEcCCCchHHhH--HHHhhhhhc
Q 013505 111 PEGIGEVQEVIDMCDFAVGLSRQLNGSVI------P--SERPNHMMLETWNPLGVVGVITAFNFPCAVL--GWNACIALV 180 (441)
Q Consensus 111 ~~a~~ev~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~i~~ALa 180 (441)
.++++|+..+++.++|+++..+....... + ...++...+..+.|+|||++|+|||||+... .+++++||+
T Consensus 81 ~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALa 160 (504)
T d1ez0a_ 81 VRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALA 160 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHH
Confidence 99999999999999999988776433211 1 1122345677888999999999999998644 468999999
Q ss_pred CCCEEEEecCCCChhhHHHHHHHHHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhcc
Q 013505 181 CGNCVVWKGAPTTPLITIAITKLVSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQR 259 (441)
Q Consensus 181 aGN~VVlkps~~~p~~~~~l~~li~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~ 259 (441)
+||+||+|||+.+|.++..+.++|.+++.++|+|+|++|+|+| +.++++.|++||+|++|+||||+.+|+.|.+.++++
T Consensus 161 aGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~ 240 (504)
T d1ez0a_ 161 AGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 240 (504)
T ss_dssp HTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred HhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhcc
Confidence 9999999999999999999999999999999999999999999 789999999999999999999999999999999999
Q ss_pred CCceee--cCCCCCeEEEeCCCCHHHHH--HHHHHHHHhcCCCCccCcceEEEecccHH-HHHHHHHHHHHhhccCCCCC
Q 013505 260 FGKCLL--ELSGNNAIIIMDDADIKLAV--RSVLFAAVGTAGQRCTTCRRLLIHESIYQ-TVLDQLVDVYKQVKIGDPLE 334 (441)
Q Consensus 260 ~~~~~l--elgG~~~~iV~~dadl~~aa--~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~-~f~~~l~~~~~~~~~g~p~~ 334 (441)
++++.+ |||||||+||++|||+++|+ +.++.++|.|+||.|++++|+||+++.++ .|++.+.+.++. + +
T Consensus 241 ~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~---~ 314 (504)
T d1ez0a_ 241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q---S 314 (504)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C---C
T ss_pred cccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c---c
Confidence 887654 99999999999999999874 47899999999999999999999887654 577767665543 3 3
Q ss_pred CCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccCCCCceEeeEEE-E---cCCCCCccccccccceEEEEEeCCH
Q 013505 335 KGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIESEGNFVQPTIV-E---ISPTADIVKEELFAPVLYVMKFQTF 410 (441)
Q Consensus 335 ~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~---~~~~~~i~~eE~fgPv~~v~~~~~~ 410 (441)
+++.+||+++..+.+++ ++.+...|+++..||.. +.+..|+++ . +..++++++||+||||++|++|+|+
T Consensus 315 ~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~ 387 (504)
T d1ez0a_ 315 PSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENV 387 (504)
T ss_dssp CBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSH
T ss_pred cccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCccccccccccccchhhcccccCCeeeeeecCCH
Confidence 47889999988777665 66778888998888763 344455544 2 3457889999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCH--HHHHhh
Q 013505 411 EEAVKINNSVPQGLSSSIFTRSP--ENIFKW 439 (441)
Q Consensus 411 ~eai~~~n~~~~gl~asv~t~d~--~~~~~~ 439 (441)
+|||+++|+++|||++||||+|. .+++++
T Consensus 388 ~eai~~an~~~~gL~a~I~t~d~d~~~a~~~ 418 (504)
T d1ez0a_ 388 ADMLSLSEMLAGSLTATIHATEEDYPQVSQL 418 (504)
T ss_dssp HHHHHHHHTCCCEEEEEEECCGGGHHHHHHH
T ss_pred HHHHHHHHCCCCCceEEEEecchhHHHHHHH
Confidence 99999999999999999999754 455554
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.5e-75 Score=589.05 Aligned_cols=370 Identities=21% Similarity=0.341 Sum_probs=332.0
Q ss_pred HHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHhhhhhcC
Q 013505 58 YEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGI-GEVQEVIDMCDFAVGLSRQLNG 136 (441)
Q Consensus 58 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~ 136 (441)
+++||++|++||+.|+.+|.++|.++|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.....+..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999999999999999999999996 6999999999988876655432
Q ss_pred cc-c--cCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHHHHHHHHhcCC
Q 013505 137 SV-I--PSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKLVSEVFERNKL 213 (441)
Q Consensus 137 ~~-~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~li~~~l~~agl 213 (441)
.. . .....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++ ++ .++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~----~~-~~~ 156 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATL----IP-QYM 156 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHH----HH-HHS
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccc----cc-ccc
Confidence 21 1 1122345667889999999999999999999999999999999999999999999999876543 43 368
Q ss_pred CCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCCCCHHHHHHHHHHHHH
Q 013505 214 PGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDDADIKLAVRSVLFAAV 293 (441)
Q Consensus 214 P~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~ 293 (441)
|+++++++.|+......+. ++.++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 157 DQNLYLVVKGGVPETTELL-KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp CTTTEEECCCSHHHHHHHT-TSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhc-ccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 9999999998655555554 568999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHCCCEEEecCcccC
Q 013505 294 GTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQGGKILTGGSVIE 373 (441)
Q Consensus 294 ~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~Ga~v~~gg~~~~ 373 (441)
.|+||.|++++|||||++++|+|+++|.++++.+ +|+|.++.+++||++++.+.+++..+++++ +...|+. .+
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~-~~ 308 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGT-WD 308 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCC-EE
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hccccee-ec
Confidence 9999999999999999999999999999999887 899999999999999999999998877543 4443433 34
Q ss_pred CCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 374 SEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 374 ~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
..++|++|||+ +++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~ 376 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMI 376 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHH
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHH
Confidence 57889999999 89999999999999999999999999999999999999999999999999999875
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.3e-59 Score=473.52 Aligned_cols=339 Identities=18% Similarity=0.233 Sum_probs=278.7
Q ss_pred HHHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChhhhhHH------------HHHHHHH
Q 013505 56 EDYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLLSIEMGKILPEGIGE------------VQEVIDM 123 (441)
Q Consensus 56 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e------------v~~~~~~ 123 (441)
+|+++++++|++||+.|+++|+.+|.++|++++++|++|+++|++++++|+||+..++..| ++.+++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999887655 5667788
Q ss_pred HHHHHHhhhhhcCccccCCCCCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHHH
Q 013505 124 CDFAVGLSRQLNGSVIPSERPNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITKL 203 (441)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~l 203 (441)
+++++...+...+....... .......+.|+|++++++|||||+.+.++++++||++||+||+|||+.+|.++..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWVR-EDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEEC-TTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhhhhcccccccccc-ccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 88887766555544433222 23345668899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCceEEEecC-CHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCC-eEEEeCCCCH
Q 013505 204 VSEVFERNKLPGAIFTSFCG-GAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNN-AIIIMDDADI 281 (441)
Q Consensus 204 i~~~l~~aglP~gvv~~v~g-~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~-~~iV~~dadl 281 (441)
+.+++...|+|.++++.+.+ +.+.+..+..++.+ .|+||+..+..+.+.++++.+++++|+||+| ++||++|||+
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~ 236 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRLREY---LSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTT---CSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCH
T ss_pred HHhhhhhccccccccccccccchhhhhhccccccc---CeEEEcccHHHHHHHhhhccccceecccCCCCCeecccccch
Confidence 99999999999999999877 55666666654444 3444444455666666777788888888766 5778899999
Q ss_pred HHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHHHHC
Q 013505 282 KLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENIKSQ 361 (441)
Q Consensus 282 ~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a~~~ 361 (441)
+.|++.++.++|.| ||.|++++|+|||+++||+|++.|.+...+..++.+.++.. ..
T Consensus 237 ~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~------------------~~---- 293 (414)
T d1o20a_ 237 KKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKT------------------RE---- 293 (414)
T ss_dssp HHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHH------------------HH----
T ss_pred hhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchhh------------------hh----
Confidence 99999999998876 99999999999999999999999999888765554322111 00
Q ss_pred CCEEEecCcccCCCCceEeeEEEEcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHHhhh
Q 013505 362 GGKILTGGSVIESEGNFVQPTIVEISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIFKWL 440 (441)
Q Consensus 362 Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~~~~ 440 (441)
+.+.+.. ...+.+++|+||||++|++|+|+||||+++|+++|||+++|||+|.+++++|+
T Consensus 294 -----------------~~~~~~~--~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~ 353 (414)
T d1o20a_ 294 -----------------IVPDVVP--ATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV 353 (414)
T ss_dssp -----------------HSTTSEE--CCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH
T ss_pred -----------------hccccee--cccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHH
Confidence 0011111 11235689999999999999999999999999999999999999999999885
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5e-49 Score=395.70 Aligned_cols=351 Identities=18% Similarity=0.173 Sum_probs=255.6
Q ss_pred HHHHHHHHHHHHhHHhhCCCHHHHHHHHHHHHHHHHhhHHHHHHHH------HHHhCCChhhh------h-HHHHHHHHH
Q 013505 57 DYEEGMKACSEASKIWMELPAPKRGEVVRQIGDALREKLHHLGRLL------SIEMGKILPEG------I-GEVQEVIDM 123 (441)
Q Consensus 57 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~Gk~~~~a------~-~ev~~~~~~ 123 (441)
.++++++.|++|++.|+.+|.++|.++|+++++.|++|+++|.+.. +.+.|.+...- . ..+..+++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 4678899999999999999999999999999999999999998853 44455543211 1 135556666
Q ss_pred HHHHHHhhhhhcCccccCCC-CCceeEEEEeccceEEEEcCCCchHHhHHHHhhhhhcCCCEEEEecCCCChhhHHHHHH
Q 013505 124 CDFAVGLSRQLNGSVIPSER-PNHMMLETWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAITK 202 (441)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~i~~ALaaGN~VVlkps~~~p~~~~~l~~ 202 (441)
++..+...+........... .+...+..+.|+|||++| ||++| ..++...+++|++||+||+||++.++.|+..+++
T Consensus 84 l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~ 161 (436)
T d1vlua_ 84 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 161 (436)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHH
Confidence 66666554433222111111 233455678899999988 66667 5667788999999999999999999999999888
Q ss_pred HHH----HHHHhcCCCCceEEEecCCHHHHHHHHcCCCccEEEeeCChHHHHHHHHHhhccCCceeecCCCCCeEEEeCC
Q 013505 203 LVS----EVFERNKLPGAIFTSFCGGAEIGQAIAKDPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLELSGNNAIIIMDD 278 (441)
Q Consensus 203 li~----~~l~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~d 278 (441)
++. +++.++|+|++++++++++.++++.|..|++|+.|+||||...++.+.+.+. .|++.++||++|+||++|
T Consensus 162 ~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~Vd~~ 238 (436)
T d1vlua_ 162 IVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLDED 238 (436)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEEECTT
T ss_pred HHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccceeeccc
Confidence 876 5567789999999999987788999999999999999999999999877754 599999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCCccCcceEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCCCCChhHHHHHHHHHHHH
Q 013505 279 ADIKLAVRSVLFAAVGTAGQRCTTCRRLLIHESIYQTVLDQLVDVYKQVKIGDPLEKGTLLGPLHTPESRKNFEKGIENI 358 (441)
Q Consensus 279 adl~~aa~~i~~~~~~~~Gq~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~v~~a 358 (441)
||+++|++.++.++|.++|| |++.++++||+++++.|...+....+. | ..+. .++. +.......
T Consensus 239 ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---g------v~l~--~~~~----~~~~~~~~ 302 (436)
T d1vlua_ 239 ADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---G------VTIH--ATKD----LKTAYFDK 302 (436)
T ss_dssp CCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---C------CCBE--ECHH----HHHHHHHH
T ss_pred ccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---C------cEEE--eCHH----HHHHhhhh
Confidence 99999999999999999996 889999999999998886655444332 1 1110 0122 22222221
Q ss_pred HHCCCEEEecCcccCCCCceEeeEEE-EcCCCCCccccccccceEEEEEeCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q 013505 359 KSQGGKILTGGSVIESEGNFVQPTIV-EISPTADIVKEELFAPVLYVMKFQTFEEAVKINNSVPQGLSSSIFTRSPENIF 437 (441)
Q Consensus 359 ~~~Ga~v~~gg~~~~~~g~~~~Ptvl-~~~~~~~i~~eE~fgPv~~v~~~~~~~eai~~~n~~~~gl~asv~t~d~~~~~ 437 (441)
...++.. .+....|++. ..+. -+.+|.|+|+++|++++|+||||+++|+.+|||+++|||+|.+.++
T Consensus 303 ~~~~~~~---------~~~~~~~~~~~~~~~---d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~ 370 (436)
T d1vlua_ 303 LNELGKL---------TEAIQCKTVDADEEQ---DFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAE 370 (436)
T ss_dssp HHHHTCC---------CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHH
T ss_pred hhhcccc---------cccccccccCCCccc---chhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHH
Confidence 1111110 1111222222 2222 2579999999999999999999999999999999999999999999
Q ss_pred hhh
Q 013505 438 KWL 440 (441)
Q Consensus 438 ~~~ 440 (441)
+|+
T Consensus 371 ~F~ 373 (436)
T d1vlua_ 371 KFM 373 (436)
T ss_dssp HHH
T ss_pred HHH
Confidence 985
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=94.43 E-value=2 Score=39.99 Aligned_cols=230 Identities=16% Similarity=0.130 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCC----ChhhhhHHHHHH--------HHHHHHHHHhhhhhcCcccc-----
Q 013505 78 PKRGEVVRQIGDALREKLHHLGRLLSIEMGK----ILPEGIGEVQEV--------IDMCDFAVGLSRQLNGSVIP----- 140 (441)
Q Consensus 78 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk----~~~~a~~ev~~~--------~~~~~~~~~~~~~~~~~~~~----- 140 (441)
++..+..+.+.+.++.+.|.-....+...-+ .+.-...|+..+ .+.++......+.+.....+
T Consensus 27 ~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~~~ 106 (431)
T d1k75a_ 27 ESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDV 106 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCcee
Confidence 3445556666777777777766666665532 122122333322 22233333333322211111
Q ss_pred CCCCCceeEEEEeccceEEEEcCCC---chHHhHHHHhhhhhcCCCE--EEEecCCCChhhHHHHHHHHHHHHHhcCCCC
Q 013505 141 SERPNHMMLETWNPLGVVGVITAFN---FPCAVLGWNACIALVCGNC--VVWKGAPTTPLITIAITKLVSEVFERNKLPG 215 (441)
Q Consensus 141 ~~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~i~~ALaaGN~--VVlkps~~~p~~~~~l~~li~~~l~~aglP~ 215 (441)
...++.....++.|+--|++..|.- ||-. +++..+||-.+|+. |++-|+...|.+. -+...+|+.
T Consensus 107 e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSs-vLM~aiPAkvAGV~~Ivv~tPp~~~~~~l--------~aa~~~Gv~- 176 (431)
T d1k75a_ 107 ETQPGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIADEIL--------YAAQLCGVQ- 176 (431)
T ss_dssp EEETTEEEEEEEEECSEEEEECCCSSSCCHHH-HHHHHHHHHHHTCSEEEEEECSSCCHHHH--------HHHHHTTCC-
T ss_pred eccCCceeeeeeeehhhheeeccCCCccchHH-HHHHHHHHHhcCCCceeEEeCCCCcchHH--------HHHHHcCcc-
Confidence 1124555566788999999999965 5554 45578899999975 4566765555432 234556665
Q ss_pred ceEEEec-CCHHHHHHHHc----CCCccEEEeeCChHHHHHHHHHhhccCCceeec-CCCCCe--EEEeCCCCHHHHHHH
Q 013505 216 AIFTSFC-GGAEIGQAIAK----DPRISLVSFTGSTKVGLMVQQTVHQRFGKCLLE-LSGNNA--IIIMDDADIKLAVRS 287 (441)
Q Consensus 216 gvv~~v~-g~~~~~~~L~~----~~~v~~v~ftGs~~~g~~i~~~a~~~~~~~~le-lgG~~~--~iV~~dadl~~aa~~ 287 (441)
.+.. ||.+.-.+|.- -|+||+|+=.|+.-+...=..-.+... .+-.. +-|.+= +|-++++|.+.++..
T Consensus 177 ---~iy~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaD 252 (431)
T d1k75a_ 177 ---DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASD 252 (431)
T ss_dssp ---EEEECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTT-SCEESCCCCCCEEEEEECTTSCHHHHHHH
T ss_pred ---ceEecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCC-ccccccccCCceEEEEecCCCCHHHHHHH
Confidence 3332 56655555553 578999999998766543322222211 11111 234444 334567899998888
Q ss_pred HHHHHHhcCCCCccCcceEEEecc--cHHHHHHHHHHHHHh
Q 013505 288 VLFAAVGTAGQRCTTCRRLLIHES--IYQTVLDQLVDVYKQ 326 (441)
Q Consensus 288 i~~~~~~~~Gq~C~a~~~v~V~~~--i~~~f~~~l~~~~~~ 326 (441)
++.-+=.... .+-++|..+ ..+++.+.+.++++.
T Consensus 253 llaQAEH~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~ 288 (431)
T d1k75a_ 253 LLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAE 288 (431)
T ss_dssp HHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHHT
T ss_pred HHhccCCccc-----ceeEEEeccHHHHHHHHHHHHHHhhh
Confidence 8765544433 345666544 456666666665554
|