Citrus Sinensis ID: 013702
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 438 | 2.2.26 [Sep-21-2011] | |||||||
| A6VDY0 | 432 | Amino-acid acetyltransfer | yes | no | 0.461 | 0.467 | 0.490 | 6e-47 | |
| P22567 | 432 | Amino-acid acetyltransfer | yes | no | 0.461 | 0.467 | 0.490 | 6e-47 | |
| Q02EG0 | 432 | Amino-acid acetyltransfer | yes | no | 0.461 | 0.467 | 0.490 | 6e-47 | |
| B7V594 | 432 | Amino-acid acetyltransfer | yes | no | 0.461 | 0.467 | 0.490 | 6e-47 | |
| A4XP61 | 432 | Amino-acid acetyltransfer | yes | no | 0.461 | 0.467 | 0.480 | 7e-45 | |
| B0KP70 | 432 | Amino-acid acetyltransfer | yes | no | 0.438 | 0.444 | 0.473 | 6e-44 | |
| Q8ZMB8 | 443 | Amino-acid acetyltransfer | yes | no | 0.568 | 0.562 | 0.377 | 1e-43 | |
| Q8Z421 | 443 | Amino-acid acetyltransfer | N/A | no | 0.568 | 0.562 | 0.377 | 1e-43 | |
| P0A100 | 432 | Amino-acid acetyltransfer | yes | no | 0.438 | 0.444 | 0.473 | 1e-43 | |
| P0A0Z9 | 432 | Amino-acid acetyltransfer | yes | no | 0.438 | 0.444 | 0.473 | 1e-43 |
| >sp|A6VDY0|ARGA_PSEA7 Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=argA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 223 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 280
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 401 EMIPEERRKRINLSRNSKYYMKKL 424
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain PA7) (taxid: 381754) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1 |
| >sp|P22567|ARGA_PSEAE Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=argA PE=1 SV=2 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 223 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 280
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 401 EMIPEERRKRINLSRNSKYYMKKL 424
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q02EG0|ARGA_PSEAB Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 223 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 280
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 401 EMIPEERRKRINLSRNSKYYMKKL 424
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain UCBPP-PA14) (taxid: 208963) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B7V594|ARGA_PSEA8 Amino-acid acetyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (478), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 223 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 280
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 401 EMIPEERRKRINLSRNSKYYMKKL 424
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
Pseudomonas aeruginosa (strain LESB58) (taxid: 557722) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|A4XP61|ARGA_PSEMY Amino-acid acetyltransferase OS=Pseudomonas mendocina (strain ymp) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 181 bits (460), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 129/204 (63%), Gaps = 2/204 (0%)
Query: 223 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 280
L+RL + Y EL AAA CR GV R H++ G LL ELF R G GT+VA + +E
Sbjct: 229 LARLGSNYQGELLDAAAQACRGGVGRSHIVSYATDGALLSELFTRTGNGTLVAQEQFESL 288
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
R A + D+ G+ ++I PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REATIEDVGGLIELISPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400
CGE+A + V+P+ R G+GD+LL IE +A + GL LF+LTTRTA WF+ RGF S+
Sbjct: 349 DCGELACLAVNPDYRHGGRGDELLARIEARARAQGLKTLFVLTTRTAHWFRERGFEPSSV 408
Query: 401 EMIPEERRKRINLSRNSKYYMKKL 424
E +P R N RNSK + K L
Sbjct: 409 ERMPAARASLYNYQRNSKVFEKAL 432
|
Pseudomonas mendocina (strain ymp) (taxid: 399739) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|B0KP70|ARGA_PSEPG Amino-acid acetyltransferase OS=Pseudomonas putida (strain GB-1) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 123/192 (64%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 292
L AAA C+ GV R H++ G LL ELF R G GT+V+ + +E R A + D+ G+
Sbjct: 241 LDAAAEACKGGVARSHIVSYAEDGALLTELFTRGGGGTLVSQEQFEVVREASIEDVGGLL 300
Query: 293 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352
++I PL E G LVRR+ E L + ++ F VVEREG IIACAAL+P + GE+A + V+P
Sbjct: 301 ELISPLEEQGILVRRSREVLEREIEQFSVVEREGMIIACAALYPIADSEAGELACLAVNP 360
Query: 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 412
E R G+GD+LL+ IE +A +GL+ LF+LTTRTA WF+ RGF +E +P R N
Sbjct: 361 EYRHGGRGDELLERIESRARQMGLNTLFVLTTRTAHWFRERGFAPSGVERLPAARASLYN 420
Query: 413 LSRNSKYYMKKL 424
RNSK + K L
Sbjct: 421 YQRNSKIFEKAL 432
|
Pseudomonas putida (strain GB-1) (taxid: 76869) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q8ZMB8|ARGA_SALTY Amino-acid acetyltransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 149/270 (55%), Gaps = 21/270 (7%)
Query: 176 IGSVYSSQNGKTF--SERRIAT-------FNNGVGFDNGNGLWSSEQG-----FAIGGQE 221
+G V S G++F + IAT +GF + G+ +SE G F Q
Sbjct: 173 MGPVAVSVTGESFNLTSEEIATQLAVKLKAEKMIGFCSSQGVTNSEGGIISELFPNEAQA 232
Query: 222 RLSRL-------NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274
R+ L +G + L A CR GV+R HL+ G LL ELF RDG+GT +
Sbjct: 233 RVEELEAQGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGSLLQELFSRDGIGTQIVM 292
Query: 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAAL 334
+ E R A + D+ GI ++I+PL + G LVRR+ E+L +D F +++R+ IACAAL
Sbjct: 293 ESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDNMTIACAAL 352
Query: 335 FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRG 394
+PF +EK GE+A + V P+ R +G+ LL+ + +A +GL LF+LTTR+ WF+ RG
Sbjct: 353 YPFVEEKIGEMACVAVHPDYRSSSRGEVLLERVAAQARQMGLRKLFVLTTRSIHWFQERG 412
Query: 395 FRECSIEMIPEERRKRINLSRNSKYYMKKL 424
F IE++PE ++K N R SK M L
Sbjct: 413 FTPVDIELLPESKKKMYNYQRRSKVLMADL 442
|
Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q8Z421|ARGA_SALTI Amino-acid acetyltransferase OS=Salmonella typhi GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 149/270 (55%), Gaps = 21/270 (7%)
Query: 176 IGSVYSSQNGKTF--SERRIAT-------FNNGVGFDNGNGLWSSEQG-----FAIGGQE 221
+G V S G++F + IAT +GF + G+ +SE G F Q
Sbjct: 173 MGPVAVSVTGESFNLTSEEIATQLAVKLKAEKMIGFCSSQGVTNSEGGIISELFPNEAQA 232
Query: 222 RLSRL-------NGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274
R+ L +G + L A CR GV+R HL+ G LL ELF RDG+GT +
Sbjct: 233 RVEELEAQGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGSLLQELFSRDGIGTQIVM 292
Query: 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAAL 334
+ E R A + D+ GI ++I+PL + G LVRR+ E+L +D F +++R+ IACAAL
Sbjct: 293 ESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDNMTIACAAL 352
Query: 335 FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRG 394
+PF +EK GE+A + V P+ R +G+ LL+ + +A +GL LF+LTTR+ WF+ RG
Sbjct: 353 YPFVEEKIGEMACVAVHPDYRSSSRGEVLLERVAAQARQMGLRKLFVLTTRSIHWFQERG 412
Query: 395 FRECSIEMIPEERRKRINLSRNSKYYMKKL 424
F IE++PE ++K N R SK M L
Sbjct: 413 FTPVDIELLPESKKKMYNYQRRSKVLMADL 442
|
Salmonella typhi (taxid: 90370) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P0A100|ARGA_PSEPU Amino-acid acetyltransferase OS=Pseudomonas putida GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 122/192 (63%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 292
L AAA C+ GV R H++ G LL ELF R G GT+V+ + +E R A + D+ G+
Sbjct: 241 LDAAAEACKGGVARSHIVSYAEDGALLTELFTRGGGGTLVSQEQFEVVREATIEDVGGLL 300
Query: 293 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352
++I PL E G LVRR+ E L + ++ F VVEREG IIACAAL+P + GE+A + V+P
Sbjct: 301 ELISPLEEQGILVRRSREVLEREIEQFSVVEREGMIIACAALYPIADSEAGELACLAVNP 360
Query: 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 412
E R G+GD+LL+ IE +A +GL LF+LTTRTA WF+ RGF +E +P R N
Sbjct: 361 EYRHGGRGDELLERIESRARQMGLSTLFVLTTRTAHWFRERGFAPSGVERLPAARASLYN 420
Query: 413 LSRNSKYYMKKL 424
RNSK + K L
Sbjct: 421 YQRNSKIFEKPL 432
|
Pseudomonas putida (taxid: 303) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P0A0Z9|ARGA_PSEPK Amino-acid acetyltransferase OS=Pseudomonas putida (strain KT2440) GN=argA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 122/192 (63%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 292
L AAA C+ GV R H++ G LL ELF R G GT+V+ + +E R A + D+ G+
Sbjct: 241 LDAAAEACKGGVARSHIVSYAEDGALLTELFTRGGGGTLVSQEQFEVVREATIEDVGGLL 300
Query: 293 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352
++I PL E G LVRR+ E L + ++ F VVEREG IIACAAL+P + GE+A + V+P
Sbjct: 301 ELISPLEEQGILVRRSREVLEREIEQFSVVEREGMIIACAALYPIADSEAGELACLAVNP 360
Query: 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 412
E R G+GD+LL+ IE +A +GL LF+LTTRTA WF+ RGF +E +P R N
Sbjct: 361 EYRHGGRGDELLERIESRARQMGLSTLFVLTTRTAHWFRERGFAPSGVERLPAARASLYN 420
Query: 413 LSRNSKYYMKKL 424
RNSK + K L
Sbjct: 421 YQRNSKIFEKPL 432
|
Pseudomonas putida (strain KT2440) (taxid: 160488) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 438 | ||||||
| 224095037 | 560 | predicted protein [Populus trichocarpa] | 0.986 | 0.771 | 0.842 | 0.0 | |
| 255568615 | 705 | N-acetyltransferase, putative [Ricinus c | 1.0 | 0.621 | 0.783 | 0.0 | |
| 356540624 | 607 | PREDICTED: amino-acid acetyltransferase- | 0.986 | 0.711 | 0.810 | 0.0 | |
| 356496999 | 605 | PREDICTED: amino-acid acetyltransferase- | 0.986 | 0.714 | 0.808 | 0.0 | |
| 356565491 | 565 | PREDICTED: amino-acid acetyltransferase- | 0.990 | 0.768 | 0.798 | 0.0 | |
| 449499852 | 577 | PREDICTED: amino-acid acetyltransferase- | 0.990 | 0.752 | 0.788 | 0.0 | |
| 449448208 | 634 | PREDICTED: amino-acid acetyltransferase- | 0.990 | 0.684 | 0.788 | 0.0 | |
| 375155311 | 616 | N-acetylglutamate synthase [Cucurbita ma | 0.995 | 0.707 | 0.792 | 0.0 | |
| 297821519 | 609 | hypothetical protein ARALYDRAFT_481154 [ | 0.997 | 0.717 | 0.772 | 0.0 | |
| 3445208 | 620 | putative amino acid acetyltransferase [A | 0.997 | 0.704 | 0.768 | 0.0 |
| >gi|224095037|ref|XP_002310336.1| predicted protein [Populus trichocarpa] gi|222853239|gb|EEE90786.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/437 (84%), Positives = 398/437 (91%), Gaps = 5/437 (1%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
MEAAG IRMMIEAKLSPGP ICNIRRHGDSSRWH+VGVSVASGNFLAAKR+GVVDGVD+G
Sbjct: 128 MEAAGKIRMMIEAKLSPGPSICNIRRHGDSSRWHDVGVSVASGNFLAAKRRGVVDGVDFG 187
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
ATGEVKKVDVTRMRERLDGGC+V+LSNLGYSSSGEVLNCNTYEVATACALAI ADKLIC+
Sbjct: 188 ATGEVKKVDVTRMRERLDGGCIVVLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICV 247
Query: 121 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 180
IDGPILDESGHLIRFLTL+EAD LIR+R KQSEIAA+YVKAV +ED+T H+DSIG +
Sbjct: 248 IDGPILDESGHLIRFLTLEEADMLIRKRAKQSEIAAHYVKAVGDEDLTFLEHNDSIGILA 307
Query: 181 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC 240
SS NGK S R ATF NGVGFDNGNG QGFAIGG+E SRLNGYLSELAAAAFVC
Sbjct: 308 SSLNGKALSGRHSATFQNGVGFDNGNG-----QGFAIGGEELQSRLNGYLSELAAAAFVC 362
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVE 300
+ GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTDL+GI+QIIQPL E
Sbjct: 363 KGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMARVTDLAGIRQIIQPLEE 422
Query: 301 SGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQG 360
SG LVRRTDEELLKAL ++ VVEREGQIIACAALFPFF+EKCGEVAAI VSPECRGQGQG
Sbjct: 423 SGTLVRRTDEELLKALYAYVVVEREGQIIACAALFPFFEEKCGEVAAIAVSPECRGQGQG 482
Query: 361 DKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 420
DKLLD+IE++A+SLGL+ LFLLTTRTADWF RGF ECSI++IPEERRK+INLSRNSKYY
Sbjct: 483 DKLLDFIERRASSLGLETLFLLTTRTADWFNRRGFSECSIQLIPEERRKKINLSRNSKYY 542
Query: 421 MKKLLPDTSGIIVDRAF 437
KKLLPDTSGI V+RAF
Sbjct: 543 TKKLLPDTSGISVNRAF 559
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255568615|ref|XP_002525281.1| N-acetyltransferase, putative [Ricinus communis] gi|223535439|gb|EEF37109.1| N-acetyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/457 (78%), Positives = 396/457 (86%), Gaps = 19/457 (4%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
MEAAG IRM++EAKLSPGP ICNIRRHGDSSRWH+VGVSVASGNFLAAKR+GVV+GVD+G
Sbjct: 161 MEAAGKIRMLMEAKLSPGPSICNIRRHGDSSRWHDVGVSVASGNFLAAKRRGVVEGVDFG 220
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
ATGEVKKVDVTRMRERLD C+V+LSNLGYSSSGEVLNCNTYEVATACALAI ADKLICI
Sbjct: 221 ATGEVKKVDVTRMRERLDANCIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICI 280
Query: 121 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 180
IDGPILDESGHLIR+L ++EAD+LIR+R KQSEIAANYVKAV +ED T HSDS+ +
Sbjct: 281 IDGPILDESGHLIRYLAIEEADALIRKRAKQSEIAANYVKAVGKEDFTSIEHSDSVRVIS 340
Query: 181 SSQNGKTF---SERRIATFNNGVGFDNGNG----------------LWSSEQGFAIGGQE 221
SSQNGK S +++ NG + +G LWS EQGFAIGG E
Sbjct: 341 SSQNGKPINGDSVNVMSSSQNGKPVNGRHGATFHFQNGVGFGNGNGLWSGEQGFAIGGHE 400
Query: 222 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR 281
R SRLNGYLSELAAA FVC+ GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR
Sbjct: 401 RQSRLNGYLSELAAATFVCKGGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR 460
Query: 282 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEK 341
A++TDLSGI+QIIQPL +SG LVRRTDEELLKALDSF V+EREGQIIACAALFPFF+EK
Sbjct: 461 MARMTDLSGIRQIIQPLEDSGVLVRRTDEELLKALDSFVVMEREGQIIACAALFPFFEEK 520
Query: 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 401
CGEVAAI VSPECRGQGQGDKLLD+IEKKA+SLGL+MLFLLTTRTADWFK RGF ECSIE
Sbjct: 521 CGEVAAIAVSPECRGQGQGDKLLDFIEKKASSLGLEMLFLLTTRTADWFKRRGFSECSIE 580
Query: 402 MIPEERRKRINLSRNSKYYMKKLLPDTSGIIVDRAFR 438
MIP++RRK+INLSRNSKYYMKKLLP+TSGI ++R +
Sbjct: 581 MIPQKRRKKINLSRNSKYYMKKLLPNTSGITINRQLQ 617
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356540624|ref|XP_003538787.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/433 (81%), Positives = 385/433 (88%), Gaps = 1/433 (0%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
MEAAGGIR+MIEAKLSPGP ICNIRRHGD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G
Sbjct: 169 MEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFG 228
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
+TGEVKKVDVTRMRERLDGGC+V+L+NLGYSSSGEVLNCNTYEVATACALAI ADKLICI
Sbjct: 229 STGEVKKVDVTRMRERLDGGCVVVLTNLGYSSSGEVLNCNTYEVATACALAIGADKLICI 288
Query: 121 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 180
IDGPILDESGHLIRFL LQEAD LIR+R KQS+ AANYVKAV EE ++ G+V
Sbjct: 289 IDGPILDESGHLIRFLPLQEADMLIRKRAKQSDAAANYVKAVDEEGFNSLECNNFNGTVK 348
Query: 181 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC 240
S G F+E ATF+NGVGF+NGNGL S EQGFAIGGQERLSR+NGYLSELAAAAFVC
Sbjct: 349 SPPIG-CFTEWHNATFHNGVGFENGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVC 407
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVE 300
R GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTRTA+V D+SGIKQ+I PL
Sbjct: 408 RGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIHPLEA 467
Query: 301 SGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQG 360
SG LV+RTDEELLK LDSF VVEREG IIACAA+FP F+EKCGEVA I VSP+CRGQGQG
Sbjct: 468 SGILVKRTDEELLKTLDSFVVVEREGHIIACAAIFPHFEEKCGEVACIAVSPDCRGQGQG 527
Query: 361 DKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 420
DKLLDY+EKKA+SLG +MLFLLTTRTADWF RGF ECSI+ IPE++R+ INLSRNSKYY
Sbjct: 528 DKLLDYMEKKASSLGFNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRMINLSRNSKYY 587
Query: 421 MKKLLPDTSGIIV 433
MKKLLP+ SGI V
Sbjct: 588 MKKLLPNISGITV 600
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496999|ref|XP_003517352.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/433 (80%), Positives = 387/433 (89%), Gaps = 1/433 (0%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
MEAAGGIR+MIEAKLSPGP ICNIRRHGD+SRWHEVGVSVASGNFLAAKR+GVV+G+D+G
Sbjct: 167 MEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGIDFG 226
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
+TGEVKKVDV+RMRERLDGGC+VIL+NLGYSSSGEVLNCNTYEVATACALAI ADKLIC+
Sbjct: 227 STGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICL 286
Query: 121 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 180
IDGPILDESG LIRFL LQEAD LIR+R +QSE AANYVKAV EE +++ G+V
Sbjct: 287 IDGPILDESGRLIRFLPLQEADMLIRKRAEQSEAAANYVKAVDEEGFNSLEYNNFNGAVK 346
Query: 181 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC 240
S G+ F+E ATF+NGVGF++GNGL S EQGFAIGGQERLSR+NGYLSELAAAAFVC
Sbjct: 347 SPPIGR-FTEWHNATFHNGVGFESGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVC 405
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVE 300
R GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTRTA V D+SGIKQ+IQPL
Sbjct: 406 RGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAGVKDISGIKQLIQPLEA 465
Query: 301 SGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQG 360
SG LV+RTDEELLK LDSF VVEREG IIACAALFP F+EKCGEVA I VSP+CRGQGQG
Sbjct: 466 SGILVKRTDEELLKTLDSFIVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQG 525
Query: 361 DKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 420
DKLLDY+EKKA+SLGL+MLFLLTTRTADWF RGF ECSI+ +PE++R+ INLSRNSKYY
Sbjct: 526 DKLLDYMEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYLPEKKRRMINLSRNSKYY 585
Query: 421 MKKLLPDTSGIIV 433
MKKLLP+ SGI V
Sbjct: 586 MKKLLPNISGITV 598
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356565491|ref|XP_003550973.1| PREDICTED: amino-acid acetyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/437 (79%), Positives = 385/437 (88%), Gaps = 3/437 (0%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
MEAAG IR+MIEAKLSPGP I NIRRHGD+SR HEVGVSVASGNFLAAKR+GVV G+D+G
Sbjct: 129 MEAAGRIRLMIEAKLSPGPSIYNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGIDFG 188
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
+TGEVKKVD++RMRERLDG C+VILSNLGYSSSGEVLNCN YEVATACALA+ ADKLICI
Sbjct: 189 STGEVKKVDISRMRERLDGNCIVILSNLGYSSSGEVLNCNAYEVATACALAVRADKLICI 248
Query: 121 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 180
DGPILDESGHLIRFL LQEAD LIR++V++SE AANYVKAVAEE + + G+V+
Sbjct: 249 TDGPILDESGHLIRFLPLQEADMLIRKQVEESETAANYVKAVAEESFKSLKNFN--GAVH 306
Query: 181 SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC 240
S +NGK FSE +TF+NGVGFDNGNGL S + GFAIGGQE LSR NGYLSELAAAAFVC
Sbjct: 307 SPRNGKPFSEYHNSTFHNGVGFDNGNGL-SGKHGFAIGGQESLSRTNGYLSELAAAAFVC 365
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVE 300
R GVQRVHLLDGTI GVLLLELFKRDGMGTMVASDLYEGTR A+VTD SGIKQ+IQPL E
Sbjct: 366 RGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDFSGIKQLIQPLEE 425
Query: 301 SGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQG 360
SG LV+RTDEELL++L SF VVEREGQIIACAALFPFF+EKCGEVAAI VSP+CRGQGQG
Sbjct: 426 SGILVKRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQG 485
Query: 361 DKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 420
DKLLDYIEKKA+S+G +MLFLLTTRTADWF RGF ECSI+ IPE++RK INLSR SKYY
Sbjct: 486 DKLLDYIEKKASSIGFEMLFLLTTRTADWFVRRGFSECSIDYIPEKKRKTINLSRKSKYY 545
Query: 421 MKKLLPDTSGIIVDRAF 437
MKKLLP+ SGI V F
Sbjct: 546 MKKLLPNKSGITVSSRF 562
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449499852|ref|XP_004160934.1| PREDICTED: amino-acid acetyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/450 (78%), Positives = 382/450 (84%), Gaps = 16/450 (3%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
MEAAGGIR+MIEAKLSPGP ICNIRRHGDS RWHEVGVSV SGNFLAAKR+GVVDGVDYG
Sbjct: 130 MEAAGGIRVMIEAKLSPGPSICNIRRHGDSRRWHEVGVSVVSGNFLAAKRRGVVDGVDYG 189
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
ATGEVKKVDV RMRERLDGGC+VILSNLGYSSSGEVLNCNTYEVATACALAI ADKLICI
Sbjct: 190 ATGEVKKVDVARMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICI 249
Query: 121 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 180
IDGPILDE+G I FLTLQEAD LIR+R KQ EIAANYVK V +ED T + +DS GS++
Sbjct: 250 IDGPILDEAGRHISFLTLQEADMLIRERAKQCEIAANYVKVVGKEDFTRY--NDSNGSIH 307
Query: 181 ------------SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 228
QNG F + F NGVGF +G GLWSSEQGF IGG ER S +NG
Sbjct: 308 LQNGKASLEAHTPFQNGVGFGPHHMPVFQNGVGFGHGTGLWSSEQGFPIGG-ERNSHMNG 366
Query: 229 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDL 288
YLSELAAAAFVCR GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A+V+DL
Sbjct: 367 YLSELAAAAFVCRGGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMARVSDL 426
Query: 289 SGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI 348
GI+QII PL +G LVRR+DEELL++LDSF VVEREGQIIACAALFPFF+E+CGE+AAI
Sbjct: 427 RGIRQIILPLEMAGTLVRRSDEELLESLDSFVVVEREGQIIACAALFPFFEERCGEIAAI 486
Query: 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERR 408
VS ECRGQGQGDKLLDY+EKKAASLGLD LFLLTTRTADWF RGF ECS E IPE+RR
Sbjct: 487 AVSAECRGQGQGDKLLDYMEKKAASLGLDRLFLLTTRTADWFVRRGFSECSFESIPEKRR 546
Query: 409 KRINLSRNSKYYMKKLLPDTSGI-IVDRAF 437
+INLSRNSKYYMKKLLPD + I VDRAF
Sbjct: 547 SKINLSRNSKYYMKKLLPDRNRIGSVDRAF 576
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449448208|ref|XP_004141858.1| PREDICTED: amino-acid acetyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/450 (78%), Positives = 382/450 (84%), Gaps = 16/450 (3%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
MEAAGGIR+MIEAKLSPGP ICNIRRHGDS RWHEVGVSV SGNFLAAKR+GVVDGVDYG
Sbjct: 187 MEAAGGIRVMIEAKLSPGPSICNIRRHGDSRRWHEVGVSVVSGNFLAAKRRGVVDGVDYG 246
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
ATGEVKKVDV RMRERLDGGC+VILSNLGYSSSGEVLNCNTYEVATACALAI ADKLICI
Sbjct: 247 ATGEVKKVDVARMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICI 306
Query: 121 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 180
IDGPILDE+G I FLTLQEAD LIR+R KQ EIAANYVK V +ED T + +DS GS++
Sbjct: 307 IDGPILDEAGRHISFLTLQEADMLIRERAKQCEIAANYVKVVGKEDFTRY--NDSNGSIH 364
Query: 181 ------------SSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNG 228
QNG F + F NGVGF +G GLWSSEQGF IGG ER S +NG
Sbjct: 365 LQNGKASLEAHTPFQNGVGFGPHHMPVFQNGVGFGHGTGLWSSEQGFPIGG-ERNSHMNG 423
Query: 229 YLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDL 288
YLSELAAAAFVCR GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A+V+DL
Sbjct: 424 YLSELAAAAFVCRGGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMARVSDL 483
Query: 289 SGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI 348
GI+QII PL +G LVRR+DEELL++LDSF VVEREGQIIACAALFPFF+E+CGE+AAI
Sbjct: 484 RGIRQIILPLEMAGTLVRRSDEELLESLDSFVVVEREGQIIACAALFPFFEERCGEIAAI 543
Query: 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERR 408
VS ECRGQGQGDKLLDY+EKKAASLGLD LFLLTTRTADWF RGF ECS E IPE+RR
Sbjct: 544 AVSAECRGQGQGDKLLDYMEKKAASLGLDRLFLLTTRTADWFVRRGFSECSFESIPEKRR 603
Query: 409 KRINLSRNSKYYMKKLLPDTSGI-IVDRAF 437
+INLSRNSKYYMKKLLPD + I VDRAF
Sbjct: 604 SKINLSRNSKYYMKKLLPDRNRIGSVDRAF 633
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375155311|gb|AFA37979.1| N-acetylglutamate synthase [Cucurbita maxima x Cucurbita moschata] | Back alignment and taxonomy information |
|---|
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/444 (79%), Positives = 378/444 (85%), Gaps = 8/444 (1%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
MEAAGGIR+MIEAKLSPGP ICNIRRHGDS RWHEVGVSV SGNFLAAKR+GVVDGVDYG
Sbjct: 173 MEAAGGIRVMIEAKLSPGPSICNIRRHGDSRRWHEVGVSVVSGNFLAAKRRGVVDGVDYG 232
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
ATGEVKKVDV RMRERLDGGC+VILSNLGYSSSGEVLNCNTYEVATACALAI ADKLICI
Sbjct: 233 ATGEVKKVDVARMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICI 292
Query: 121 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGH---SDSIG 177
IDGPILDE+G I FLTLQEAD LIR+R K EIAANYVK V +E T H DS G
Sbjct: 293 IDGPILDETGRHISFLTLQEADKLIRERAKHCEIAANYVKVVGKEGFTHSNHYINDDSNG 352
Query: 178 SVYSSQ---NGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELA 234
++ + NG F + F NGVGF +G+GLWSSEQGF IGG ER S LNGYLSELA
Sbjct: 353 GIHHTPTFPNGVGFGSHHVPVFQNGVGFGHGSGLWSSEQGFPIGG-ERNSHLNGYLSELA 411
Query: 235 AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQI 294
AAAFVCR GVQRVH+LDGTIGGVLLLELFKRDGMGTMVASDLYEGTR A V+DL GI+QI
Sbjct: 412 AAAFVCRGGVQRVHVLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMASVSDLRGIRQI 471
Query: 295 IQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 354
IQPL +G LV RTDEELL++L+SF VVEREGQIIACAALFPFF+E+CGE+AAI VS EC
Sbjct: 472 IQPLEMAGTLVPRTDEELLESLNSFVVVEREGQIIACAALFPFFEERCGEIAAIAVSAEC 531
Query: 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLS 414
RGQGQGDKLLDY+EKKAASLGLD LFLLTTRTADWF RGF ECS E IPE+RR+RINLS
Sbjct: 532 RGQGQGDKLLDYMEKKAASLGLDRLFLLTTRTADWFVRRGFSECSFESIPEKRRRRINLS 591
Query: 415 RNSKYYMKKLLPDTSGI-IVDRAF 437
R SKYYMKKLLPD + I VDRAF
Sbjct: 592 RKSKYYMKKLLPDRNRIGSVDRAF 615
|
Source: Cucurbita maxima x Cucurbita moschata Species: Cucurbita maxima x Cucurbita moschata Genus: Cucurbita Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297821519|ref|XP_002878642.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] gi|297324481|gb|EFH54901.1| hypothetical protein ARALYDRAFT_481154 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/440 (77%), Positives = 379/440 (86%), Gaps = 3/440 (0%)
Query: 2 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 61
EAAG I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GA
Sbjct: 167 EAAGAISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGA 226
Query: 62 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 121
TG VKK+DV R+RERLD G +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+
Sbjct: 227 TGLVKKIDVDRIRERLDSGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIM 286
Query: 122 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 181
DGPILDE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + +
Sbjct: 287 DGPILDENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVT 346
Query: 182 SQN---GKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAF 238
+ N G+ E+ TF NGVGFDNGNGLWS EQGFAIGG+ER+SRLNGYLSELAAAAF
Sbjct: 347 TPNNHIGRPIWEKHTLTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAF 406
Query: 239 VCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPL 298
VCR GV RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR AKV DL+GI+QII PL
Sbjct: 407 VCRGGVNRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTREAKVEDLAGIRQIITPL 466
Query: 299 VESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 358
ESGALVRRTDEELL+ALDSF VVEREGQIIACAALFPFF++KCGEVAAI V+ +CRGQG
Sbjct: 467 EESGALVRRTDEELLRALDSFVVVEREGQIIACAALFPFFEDKCGEVAAIAVASDCRGQG 526
Query: 359 QGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 418
QGDKLLDYIEKKA++ GL+MLFLLTTRTADWF RGF+EC IEMIPE RR+RINLSR SK
Sbjct: 527 QGDKLLDYIEKKASAFGLEMLFLLTTRTADWFVRRGFQECPIEMIPEARRERINLSRRSK 586
Query: 419 YYMKKLLPDTSGIIVDRAFR 438
YYMKKLLPD SGI V R F+
Sbjct: 587 YYMKKLLPDRSGISVVRTFQ 606
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3445208|gb|AAC32438.1| putative amino acid acetyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/440 (76%), Positives = 380/440 (86%), Gaps = 3/440 (0%)
Query: 2 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 61
EAAG I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GA
Sbjct: 178 EAAGAISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGA 237
Query: 62 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 121
TG VKK+DV R+RERLD G +V+L NLG+SS+GEVLNCNTYEVATACALAI ADKLICI+
Sbjct: 238 TGLVKKIDVDRIRERLDSGSVVLLRNLGHSSTGEVLNCNTYEVATACALAIGADKLICIM 297
Query: 122 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 181
DGP+LDE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + +
Sbjct: 298 DGPVLDENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVT 357
Query: 182 SQN---GKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAF 238
+ N G+ E+ TF NGVGFDNGNGLWS EQGFAIGG+ER+SRLNGYLSELAAAAF
Sbjct: 358 TPNNHIGRPIWEKLSPTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAF 417
Query: 239 VCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPL 298
VCR GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEG R AKV DL+GI+QII+PL
Sbjct: 418 VCRGGVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGNREAKVEDLAGIRQIIKPL 477
Query: 299 VESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 358
ESGALVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI V+ +CRGQG
Sbjct: 478 EESGALVRRTDEELLRALDSFVVVEREGHIIACAALFPFFEEKCGEVAAIAVASDCRGQG 537
Query: 359 QGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 418
QGDKLLDYIEKKA++LGL+MLFLLTTRTADWF RGF+EC IEMIPE RR+RINLSR SK
Sbjct: 538 QGDKLLDYIEKKASALGLEMLFLLTTRTADWFVRRGFQECPIEMIPEARRERINLSRRSK 597
Query: 419 YYMKKLLPDTSGIIVDRAFR 438
YYMKKLLPD SGI V R F+
Sbjct: 598 YYMKKLLPDRSGISVVRTFQ 617
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 438 | ||||||
| TAIR|locus:2059165 | 609 | NAGS1 "N-acetyl-l-glutamate sy | 0.997 | 0.717 | 0.743 | 3.6e-169 | |
| TAIR|locus:2120130 | 613 | NAGS2 "N-acetyl-l-glutamate sy | 0.990 | 0.707 | 0.742 | 4.1e-168 | |
| UNIPROTKB|P22567 | 432 | argA "Amino-acid acetyltransfe | 0.461 | 0.467 | 0.490 | 9.8e-66 | |
| TIGR_CMR|CPS_0465 | 436 | CPS_0465 "amino-acid N-acetylt | 0.415 | 0.417 | 0.417 | 1.1e-58 | |
| UNIPROTKB|P0A6C5 | 443 | argA [Escherichia coli K-12 (t | 0.495 | 0.489 | 0.403 | 1.6e-57 | |
| TIGR_CMR|SO_4245 | 445 | SO_4245 "amino-acid acetyltran | 0.452 | 0.444 | 0.393 | 9.9e-52 | |
| UNIPROTKB|Q9KPQ0 | 445 | argA "Amino-acid acetyltransfe | 0.438 | 0.431 | 0.375 | 1.8e-50 | |
| TIGR_CMR|VC_2316 | 445 | VC_2316 "N-acetylglutamate syn | 0.438 | 0.431 | 0.375 | 1.8e-50 | |
| TIGR_CMR|CHY_2263 | 294 | CHY_2263 "acetylglutamate kina | 0.212 | 0.316 | 0.340 | 5.9e-11 | |
| UNIPROTKB|O33289 | 174 | argA "Amino-acid acetyltransfe | 0.271 | 0.683 | 0.299 | 9.8e-09 |
| TAIR|locus:2059165 NAGS1 "N-acetyl-l-glutamate synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1645 (584.1 bits), Expect = 3.6e-169, P = 3.6e-169
Identities = 327/440 (74%), Positives = 369/440 (83%)
Query: 2 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 61
EAAG I +MIEAKLSPGP I NIRRHGDSSR HE GV V +GNF AAKR+GVVDGVD+GA
Sbjct: 167 EAAGAISVMIEAKLSPGPSIYNIRRHGDSSRLHETGVRVDTGNFFAAKRRGVVDGVDFGA 226
Query: 62 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 121
TG VKK+DV R+RERLD G +V+L NLG+SS+GEVLNCNTYEVATACALAI ADKLICI+
Sbjct: 227 TGLVKKIDVDRIRERLDSGSVVLLRNLGHSSTGEVLNCNTYEVATACALAIGADKLICIM 286
Query: 122 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 181
DGP+LDE+GHL+RFLTLQEAD+L+R+R +QSEIAANYVKAV + I+ F + +
Sbjct: 287 DGPVLDENGHLVRFLTLQEADTLVRKRAQQSEIAANYVKAVGDGGISSFPEPLGYNGMVT 346
Query: 182 SQN---GKTFSERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAAAF 238
+ N G+ E+ T LWS EQGFAIGG+ER+SRLNGYLSELAAAAF
Sbjct: 347 TPNNHIGRPIWEKLSPTFQNGVGFDNGNGLWSGEQGFAIGGEERISRLNGYLSELAAAAF 406
Query: 239 VCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPL 298
VCR GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEG R AKV DL+GI+QII+PL
Sbjct: 407 VCRGGVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGNREAKVEDLAGIRQIIKPL 466
Query: 299 VESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 358
ESGALVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI V+ +CRGQG
Sbjct: 467 EESGALVRRTDEELLRALDSFVVVEREGHIIACAALFPFFEEKCGEVAAIAVASDCRGQG 526
Query: 359 QGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 418
QGDKLLDYIEKKA++LGL+MLFLLTTRTADWF RGF+EC IEMIPE RR+RINLSR SK
Sbjct: 527 QGDKLLDYIEKKASALGLEMLFLLTTRTADWFVRRGFQECPIEMIPEARRERINLSRRSK 586
Query: 419 YYMKKLLPDTSGIIVDRAFR 438
YYMKKLLPD SGI V R F+
Sbjct: 587 YYMKKLLPDRSGISVVRTFQ 606
|
|
| TAIR|locus:2120130 NAGS2 "N-acetyl-l-glutamate synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1635 (580.6 bits), Expect = 4.1e-168, P = 4.1e-168
Identities = 326/439 (74%), Positives = 369/439 (84%)
Query: 2 EAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGA 61
EAAG I +M+EAKLSPGP ICNIRRHGD SR H++GV V +GNF AAKR+GVVDGVD+GA
Sbjct: 174 EAAGAISVMLEAKLSPGPSICNIRRHGDRSRLHDIGVRVDTGNFFAAKRRGVVDGVDFGA 233
Query: 62 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICII 121
TGEVKK+DV R+ ERLDGG +V+L NLG+SSSGEVLNCNTYEVATACALAI ADKLICI+
Sbjct: 234 TGEVKKIDVDRICERLDGGSVVLLRNLGHSSSGEVLNCNTYEVATACALAIGADKLICIM 293
Query: 122 DGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITC-FGHSDSIGSVY 180
DGPILDESGHLI FLTLQEAD L+R+R +QS+IAANYVKAV + + +++ G++
Sbjct: 294 DGPILDESGHLIHFLTLQEADMLVRKRAQQSDIAANYVKAVGDGSMAYPEPPNNTNGNIT 353
Query: 181 SSQNGKTFS----ERRIATXXXXXXXXXXXXLWSSEQGFAIGGQERLSRLNGYLSELAAA 236
S+QNG+ S LW EQGFAIGG+ERLSRLNGYLSELAAA
Sbjct: 354 SAQNGRAVSFWGNGNHTPIFQNGVGFDNGNGLWPCEQGFAIGGEERLSRLNGYLSELAAA 413
Query: 237 AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQ 296
AFVCR GV+RVHLLDGTI GVLLLELFKRDGMGTMVASD+YEGTR A+V DL+GI+ II+
Sbjct: 414 AFVCRGGVKRVHLLDGTISGVLLLELFKRDGMGTMVASDVYEGTRDARVEDLAGIRHIIK 473
Query: 297 PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 356
PL ESG LVRRTDEELL+ALDSF VVEREGQIIACAALFPFFK+KCGEVAAI V+ +CRG
Sbjct: 474 PLEESGILVRRTDEELLRALDSFVVVEREGQIIACAALFPFFKDKCGEVAAIAVASDCRG 533
Query: 357 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRN 416
QGQGDKLLDYIEKKA+SLGL+ LFLLTTRTADWF RGF+ECSIE+IPE RR+RINLSRN
Sbjct: 534 QGQGDKLLDYIEKKASSLGLEKLFLLTTRTADWFVRRGFQECSIEIIPESRRQRINLSRN 593
Query: 417 SKYYMKKLLPDTSGIIVDR 435
SKYYMKKL+PD SGI V R
Sbjct: 594 SKYYMKKLIPDRSGISVMR 612
|
|
| UNIPROTKB|P22567 argA "Amino-acid acetyltransferase" [Pseudomonas aeruginosa PAO1 (taxid:208964)] | Back alignment and assigned GO terms |
|---|
Score = 477 (173.0 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
Identities = 100/204 (49%), Positives = 135/204 (66%)
Query: 223 LSRL-NGYLSELA-AAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 280
L RL N Y +EL AAA CR GV+R H++ T G LL ELF R G GT+VA + +E
Sbjct: 229 LQRLGNSYQAELLDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQL 288
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
R A + D+ G+ ++I+PL E G LVRR+ E L + ++ F +VEREG IIACAAL+P
Sbjct: 289 REAGIEDVGGLIELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADS 348
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400
+ GE+A + V+PE R G+GD+LL+ IE++A LGL LF+LTTRTA WF+ RGF+ S+
Sbjct: 349 EAGELACLAVNPEYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSV 408
Query: 401 EMIPEERRKRINLSRNSKYYMKKL 424
E +P R N RNS+ + K L
Sbjct: 409 ERLPAARASLYNFQRNSQVFEKSL 432
|
|
| TIGR_CMR|CPS_0465 CPS_0465 "amino-acid N-acetyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 373 (136.4 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 76/182 (41%), Positives = 115/182 (63%)
Query: 243 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESG 302
GV+R H + LL ELF RDG GT++A D E TA + D++GI ++IQPL E G
Sbjct: 255 GVERCHCVSYQSDTALLQELFTRDGAGTLIAKDHKELIATATIDDVAGILELIQPLEEEG 314
Query: 303 ALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 362
LV+R+ E L ++ F V+++E IIACAAL+P+ + K EVA + + P+ R +G++
Sbjct: 315 VLVKRSRELLEMEIEYFTVLKKEEVIIACAALYPYPEAKMAEVACVVIDPDYRKGNRGER 374
Query: 363 LLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 422
+++ +E A GL LFLLTT + WF +GF E S+E +PE +++ N RNSK ++K
Sbjct: 375 IINALELSAKKKGLTSLFLLTTVSGHWFLEQGFVEASLERLPEGKKQMYNFQRNSKVFIK 434
Query: 423 KL 424
+
Sbjct: 435 DI 436
|
|
| UNIPROTKB|P0A6C5 argA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 425 (154.7 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 88/218 (40%), Positives = 128/218 (58%)
Query: 208 LWSSEQGFAIGGQERLSRLN-GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD 266
L+ +E + QE N G + L A CR GV+R HL+ G LL ELF RD
Sbjct: 225 LFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGALLQELFSRD 284
Query: 267 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREG 326
G+GT + + E R A + D+ GI ++I+PL + G LVRR+ E+L +D F +++R+
Sbjct: 285 GIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDN 344
Query: 327 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 386
IACAAL+PF +EK GE+A + V P+ R +G+ LL+ I +A GL LF+LTTR+
Sbjct: 345 TTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQSGLSKLFVLTTRS 404
Query: 387 ADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424
WF+ RGF I+++PE +++ N R SK M L
Sbjct: 405 IHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADL 442
|
|
| TIGR_CMR|SO_4245 SO_4245 "amino-acid acetyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 370 (135.3 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 78/198 (39%), Positives = 117/198 (59%)
Query: 221 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGT 280
E+ S G ++ L A+ CR GV R HL+ G LL ELF R+G+GT + ++ E
Sbjct: 242 EQGSACIGTMAFLKASIDACRNGVPRCHLVSYLDDGALLQELFSREGIGTQIVTESAERL 301
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
R A ++D+ GI +I+PL E G LVRR+ E+L ++ F ++ER+G +I CAAL+PF ++
Sbjct: 302 RRASISDIGGILNLIRPLEEQGILVRRSREQLEIEIEQFMLIERDGLVIGCAALYPFEED 361
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400
GE A + V P+ R +G LL I +A S G LF LTTR+ WF GF +
Sbjct: 362 NAGEFACLVVHPDYRDADRGSLLLKNIIGQARSRGYSRLFALTTRSIHWFLEHGFVIEDV 421
Query: 401 EMIPEERRKRINLSRNSK 418
+ +P+++++ N R SK
Sbjct: 422 DALPQKKKQLYNYQRRSK 439
|
|
| UNIPROTKB|Q9KPQ0 argA "Amino-acid acetyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 360 (131.8 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 72/192 (37%), Positives = 113/192 (58%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 292
L AA CR GV R HL+ G L+ ELF DG+GT + E R A + D+ GI
Sbjct: 254 LRAALKACRAGVPRSHLVSYKEDGALIQELFSFDGIGTQIVMASAEQIRQATIDDIGGIF 313
Query: 293 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352
+I+PL E G LVRR+ E+L + + F +++++G +I C+AL+P+ +E+ E+A + + P
Sbjct: 314 DLIRPLEEQGILVRRSREQLEQEIHKFTIIDKDGLVIGCSALYPYPEERMAEMACVAIHP 373
Query: 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 412
E R +G LL + + +A +G+ LF+LTT + WF+ +GF E +E +P ++ N
Sbjct: 374 EYRDGHRGLHLLVHSKHQAKQMGIRHLFVLTTHSTHWFREQGFNEVDVEALPMAKKSLYN 433
Query: 413 LSRNSKYYMKKL 424
R SK M +L
Sbjct: 434 YQRRSKILMLQL 445
|
|
| TIGR_CMR|VC_2316 VC_2316 "N-acetylglutamate synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 360 (131.8 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 72/192 (37%), Positives = 113/192 (58%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 292
L AA CR GV R HL+ G L+ ELF DG+GT + E R A + D+ GI
Sbjct: 254 LRAALKACRAGVPRSHLVSYKEDGALIQELFSFDGIGTQIVMASAEQIRQATIDDIGGIF 313
Query: 293 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352
+I+PL E G LVRR+ E+L + + F +++++G +I C+AL+P+ +E+ E+A + + P
Sbjct: 314 DLIRPLEEQGILVRRSREQLEQEIHKFTIIDKDGLVIGCSALYPYPEERMAEMACVAIHP 373
Query: 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 412
E R +G LL + + +A +G+ LF+LTT + WF+ +GF E +E +P ++ N
Sbjct: 374 EYRDGHRGLHLLVHSKHQAKQMGIRHLFVLTTHSTHWFREQGFNEVDVEALPMAKKSLYN 433
Query: 413 LSRNSKYYMKKL 424
R SK M +L
Sbjct: 434 YQRRSKILMLQL 445
|
|
| TIGR_CMR|CHY_2263 CHY_2263 "acetylglutamate kinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 129 (50.5 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 33/97 (34%), Positives = 54/97 (55%)
Query: 57 VDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADK 116
+D G GE+ +V+ + +D G + +++ +G + SGE N N EVA A+A++ADK
Sbjct: 148 LDLGYVGEISEVNPEILLTLIDKGYIPVVAPVGSNGSGEFYNINADEVAAEVAVALKADK 207
Query: 117 LICIIDGP--ILDESGH--LIRFLTLQEADSLIRQRV 149
LI + D P +L+E L+ T+ E LI + V
Sbjct: 208 LIVLTDTPGILLNEKDENSLLSKATIAEVKELINRGV 244
|
|
| UNIPROTKB|O33289 argA "Amino-acid acetyltransferase" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 139 (54.0 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 38/127 (29%), Positives = 63/127 (49%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE---GQIIACAALFPF 337
R A+ +D+ IKQ++ L+ + L +A+ F+V E G+++ C AL
Sbjct: 13 RRARTSDVPAIKQLVDTYAGK-ILLEKNLVTLYEAVQEFWVAEHPDLYGKVVGCGALHVL 71
Query: 338 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRE 397
+ + GE+ + V P G G G ++D + + A L L +F+LT T ++F GF E
Sbjct: 72 WSD-LGEIRTVAVDPAMTGHGIGHAIVDRLLQVARDLQLQRVFVLTFET-EFFARHGFTE 129
Query: 398 CSIEMIP 404
IE P
Sbjct: 130 --IEGTP 134
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 438 | |||
| PLN02825 | 515 | PLN02825, PLN02825, amino-acid N-acetyltransferase | 0.0 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 3e-74 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 4e-62 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 1e-60 | |
| COG1246 | 153 | COG1246, ArgA, N-acetylglutamate synthase and rela | 7e-39 | |
| PRK05279 | 441 | PRK05279, PRK05279, N-acetylglutamate synthase; Va | 7e-38 | |
| TIGR01890 | 429 | TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltran | 5e-26 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 4e-24 | |
| PRK07757 | 152 | PRK07757, PRK07757, acetyltransferase; Provisional | 4e-21 | |
| cd04237 | 280 | cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylgluta | 5e-17 | |
| PRK12308 | 614 | PRK12308, PRK12308, bifunctional argininosuccinate | 6e-17 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 2e-16 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 2e-16 | |
| PRK07922 | 169 | PRK07922, PRK07922, N-acetylglutamate synthase; Va | 8e-15 | |
| TIGR00761 | 231 | TIGR00761, argB, acetylglutamate kinase | 2e-12 | |
| pfam13508 | 79 | pfam13508, Acetyltransf_7, Acetyltransferase (GNAT | 4e-11 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 9e-11 | |
| pfam00583 | 80 | pfam00583, Acetyltransf_1, Acetyltransferase (GNAT | 2e-10 | |
| cd04301 | 65 | cd04301, NAT_SF, N-Acyltransferase superfamily: Va | 3e-10 | |
| PRK14058 | 268 | PRK14058, PRK14058, acetylglutamate/acetylaminoadi | 5e-09 | |
| cd04249 | 252 | cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glut | 1e-08 | |
| PLN02512 | 309 | PLN02512, PLN02512, acetylglutamate kinase | 2e-08 | |
| COG0548 | 265 | COG0548, ArgB, Acetylglutamate kinase [Amino acid | 1e-07 | |
| CHL00202 | 284 | CHL00202, argB, acetylglutamate kinase; Provisiona | 1e-06 | |
| cd04251 | 257 | cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glut | 2e-06 | |
| PRK04531 | 398 | PRK04531, PRK04531, acetylglutamate kinase; Provis | 2e-06 | |
| cd04252 | 248 | cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acety | 6e-06 | |
| COG0456 | 177 | COG0456, RimI, Acetyltransferases [General functio | 6e-06 | |
| PRK00942 | 283 | PRK00942, PRK00942, acetylglutamate kinase; Provis | 4e-05 | |
| pfam13673 | 118 | pfam13673, Acetyltransf_10, Acetyltransferase (GNA | 5e-05 | |
| cd04238 | 256 | cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L- | 7e-05 | |
| cd04250 | 279 | cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutam | 9e-05 | |
| pfam13527 | 127 | pfam13527, Acetyltransf_9, Acetyltransferase (GNAT | 2e-04 | |
| cd02169 | 297 | cd02169, Citrate_lyase_ligase, Citrate lyase ligas | 6e-04 | |
| TIGR01575 | 131 | TIGR01575, rimI, ribosomal-protein-alanine acetylt | 8e-04 | |
| pfam13420 | 154 | pfam13420, Acetyltransf_4, Acetyltransferase (GNAT | 0.002 | |
| cd02115 | 248 | cd02115, AAK, Amino Acid Kinases (AAK) superfamily | 0.003 | |
| pfam00696 | 230 | pfam00696, AA_kinase, Amino acid kinase family | 0.003 |
| >gnl|CDD|215441 PLN02825, PLN02825, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 797 bits (2061), Expect = 0.0
Identities = 344/427 (80%), Positives = 377/427 (88%), Gaps = 3/427 (0%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
MEAAG IR+MIEAKLSPGP I N+RRHGD+SRWHEVGVSVASGNFLAAKR+GVV+GVD+G
Sbjct: 90 MEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFG 149
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
ATGEVKK+DV+R++ERLD C+V+LSNLGYSSSGEVLNCNTYEVATACALAI ADKLICI
Sbjct: 150 ATGEVKKIDVSRIKERLDSNCIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICI 209
Query: 121 IDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVY 180
+DGPILDE+G LIRF+TL+EAD LIR+R KQSEIAANYVKAV ED + DS+ +
Sbjct: 210 VDGPILDENGRLIRFMTLEEADMLIRKRAKQSEIAANYVKAVGGEDYSYSLGLDSVNTTP 269
Query: 181 SSQNGKTFSERRIAT--FNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAF 238
+ NG+ F AT F NGVGFDNGNGL S EQGFAIGG+ERLSRLNGYLSELAAAAF
Sbjct: 270 FNNNGRGFWGSGSATDSFQNGVGFDNGNGL-SGEQGFAIGGEERLSRLNGYLSELAAAAF 328
Query: 239 VCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPL 298
VCR GVQRVHLLDGTI GVLLLELF RDGMGTM+ASD+YEGTR A+V DL+GI+QII+PL
Sbjct: 329 VCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASDMYEGTRMARVEDLAGIRQIIRPL 388
Query: 299 VESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 358
ESG LVRRTDEELL+ALDSF VVEREG IIACAALFPFF+EKCGEVAAI VSPECRGQG
Sbjct: 389 EESGILVRRTDEELLRALDSFVVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQG 448
Query: 359 QGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 418
QGDKLLDYIEKKAASLGL+ LFLLTTRTADWF RGF ECSIE +PE RRKRINLSR SK
Sbjct: 449 QGDKLLDYIEKKAASLGLEKLFLLTTRTADWFVRRGFSECSIESLPEARRKRINLSRGSK 508
Query: 419 YYMKKLL 425
YYMKKLL
Sbjct: 509 YYMKKLL 515
|
Length = 515 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 238 bits (611), Expect = 3e-74
Identities = 94/192 (48%), Positives = 127/192 (66%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 292
L AA CR GV+R HL+ G LL ELF RDG+GTM+ + E R A + D+ GI
Sbjct: 250 LRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGIL 309
Query: 293 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352
++I+PL E G LVRR+ E+L + +D F V+ER+G II CAAL+PF +EK GE+A + V P
Sbjct: 310 ELIRPLEEQGILVRRSREQLEREIDKFTVIERDGLIIGCAALYPFPEEKMGEMACLAVHP 369
Query: 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 412
+ RG G+G++LL IE++A LGL LF+LTTRTA WF RGF ++ +PE +R+ N
Sbjct: 370 DYRGSGRGERLLKRIEQRARQLGLKRLFVLTTRTAHWFLERGFVPVDVDDLPEAKRQLYN 429
Query: 413 LSRNSKYYMKKL 424
R SK +K L
Sbjct: 430 YQRRSKVLVKDL 441
|
Length = 441 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 4e-62
Identities = 75/165 (45%), Positives = 104/165 (63%), Gaps = 10/165 (6%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
EAAG +R+ IEA LS G P + + V SGNF+ A+ GVVDGVD+G
Sbjct: 91 KEAAGAVRLEIEALLSMGLPNSPMAG---------ARIRVVSGNFVTARPLGVVDGVDFG 141
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
TGEV+++D +R +LD G +V+LS LGYS +GEV N + +VATA A+A++ADKLI +
Sbjct: 142 HTGEVRRIDADAIRRQLDQGSIVLLSPLGYSPTGEVFNLSMEDVATAVAIALKADKLIFL 201
Query: 121 IDGP-ILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAE 164
DGP +LD+ G LIR LT QEA++L+ + A ++A E
Sbjct: 202 TDGPGLLDDDGELIRELTAQEAEALLETGALLTNDTARLLQAAIE 246
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 203 bits (517), Expect = 1e-60
Identities = 94/206 (45%), Positives = 132/206 (64%), Gaps = 6/206 (2%)
Query: 219 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 278
G E RL L+AA CR GV R H++ G LL ELF RDG+GT ++ + +E
Sbjct: 230 GSETTRRL------LSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFE 283
Query: 279 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 338
R A + D+ GI +I+PL E G LVRR+ E L + + F ++E +G II CAAL+P+
Sbjct: 284 SIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEHDGNIIGCAALYPYA 343
Query: 339 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 398
+E CGE+A + VSPE + G+G++LL +IE +A +G+ LF+LTTRT WF+ RGF+
Sbjct: 344 EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTTRTGHWFRERGFQTA 403
Query: 399 SIEMIPEERRKRINLSRNSKYYMKKL 424
S++ +PE RRK N RNSK MK+L
Sbjct: 404 SVDELPEARRKLYNYQRNSKILMKRL 429
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|224167 COG1246, ArgA, N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 7e-39
Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Query: 280 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK 339
R A+++D+ I ++I+PL G L+RR+ E+L + +D F ++ER+G++I CAAL P +
Sbjct: 3 IRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLE 62
Query: 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECS 399
E GE+ ++ V P+ RG G+G++LL+ + A LG+ LF+LTTR+ ++F RGF
Sbjct: 63 EDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTTRSPEFFAERGFTRVD 122
Query: 400 IEMIPEERRKRINLS-RNSKYYMKKLL 425
+ +PEE N R SK LL
Sbjct: 123 KDELPEEVWSSYNFCERRSKCLAFDLL 149
|
Length = 153 |
| >gnl|CDD|235386 PRK05279, PRK05279, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 7e-38
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 16/151 (10%)
Query: 1 MEAAGGIRMMIEAKLS---PGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGV 57
+AAG +R+ IEA+LS P P+ + V SGNF+ A+ GV DGV
Sbjct: 98 KQAAGELRLDIEARLSMGLPNTPMAGAH------------IRVVSGNFVTARPLGVDDGV 145
Query: 58 DYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKL 117
DY TGEV+++D +R +LD G +V+LS LGYS +GE N EVAT A+A++ADKL
Sbjct: 146 DYQHTGEVRRIDAEAIRRQLDSGAIVLLSPLGYSPTGESFNLTMEEVATQVAIALKADKL 205
Query: 118 ICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 147
I + +LDE G LIR L+ EA +L+
Sbjct: 206 IFFTESQGVLDEDGELIRELSPNEAQALLEA 236
|
Length = 441 |
| >gnl|CDD|233620 TIGR01890, N-Ac-Glu-synth, amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 5e-26
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 20/169 (11%)
Query: 1 MEAAGGIRMMIEAKLS---PGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGV 57
+AAG +R+ IEA+LS P+ R + V SGNF+ A+ GV++GV
Sbjct: 90 QQAAGTLRLAIEARLSMSLSNTPMAGSR------------LPVVSGNFVTARPIGVIEGV 137
Query: 58 DYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKL 117
DY TG ++K+D +R +LD G +V+LS LG+S +GE N + +VAT+ A++++ADKL
Sbjct: 138 DYEHTGVIRKIDTEGIRRQLDAGSIVLLSPLGHSPTGETFNLDMEDVATSVAISLKADKL 197
Query: 118 I--CIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAE 164
I + G I D G L L+ QE +SL + SE + A +
Sbjct: 198 IYFTLSPG-ISDPDGTLAAELSPQEVESLAER--LGSETTRRLLSAAVK 243
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate [Amino acid biosynthesis, Glutamate family]. Length = 429 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 4e-24
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
M G + I A+LS +HG + VG+S GN + AK+ V DGVD G
Sbjct: 77 MVLGGTVNKEIVARLS---------KHGGQA----VGLSGVDGNLVTAKKLDVDDGVDLG 123
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLI-- 118
GE++KV+ + LD G + +++ + GE LN N A A A A++A+KLI
Sbjct: 124 YVGEIRKVNPELIERLLDNGAIPVIAPIAVDEDGETLNVNADTAAGALAAALKAEKLILL 183
Query: 119 CIIDGPILDESGH--LIRFLTLQEADSLIRQ 147
+ G +LD+ G LI L +EA+ LI Q
Sbjct: 184 TDVPG-VLDDKGDPSLISELDAEEAEELIEQ 213
|
Length = 265 |
| >gnl|CDD|236088 PRK07757, PRK07757, acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 89.1 bits (222), Expect = 4e-21
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
R A+++D+ I +I + G ++ R+ +EL + + FYV E EG+I+ C AL E
Sbjct: 5 RKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALH-ILWE 63
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400
E+ ++ VS + RGQG G L++ ++A LG+ +F LT + ++F+ GFRE
Sbjct: 64 DLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTYQP-EFFEKLGFREVDK 122
Query: 401 EMIPE 405
E +P+
Sbjct: 123 EALPQ 127
|
Length = 152 |
| >gnl|CDD|239770 cd04237, AAK_NAGS-ABP, AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 5e-17
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 220 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 272
+ N L AA CR GV RVHL+ G LLLELF RDG+GT++
Sbjct: 228 ETGALLTNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 280 |
| >gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 6e-17
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 262 LFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYV 321
L RD G V R A++TD+ I+ ++ G + R+ EL++ + SF V
Sbjct: 456 LAARDTSGVKV--------RPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAV 507
Query: 322 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 381
E G++ CA+L+ + E+ ++GV + QGQG L+ Y+ +KA + + +F+
Sbjct: 508 AEHHGEVTGCASLY-IYDSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFV 566
Query: 382 LTTRTADWFKSRGFRECSIEMIPE 405
L TR ++F +GF S ++PE
Sbjct: 567 L-TRVPEFFMKQGFSPTSKSLLPE 589
|
Length = 614 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 78.3 bits (194), Expect = 2e-16
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 36 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95
VG+S G + A++K +D G GEV +V+ + L+ G + +++ + GE
Sbjct: 95 VGLSGKDGGLIKAEKK-EEKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAPIAVDEDGE 153
Query: 96 VLNCNTYEVATACALAIEADKLICI--IDGPILDESGHLIRFLTLQEADSLIRQ 147
N N A A A A++A+KLI + + G +LD+ G LI LT +EA+ LI
Sbjct: 154 TYNVNADTAAGAIAAALKAEKLILLTDVPG-VLDDPGSLISELTPKEAEELIED 206
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.6 bits (195), Expect = 2e-16
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
I +HG + VG+S G + AK+ + D G GEV V+ + L+ G +
Sbjct: 112 INKHGGKA----VGLSGKDGGLITAKKLE--EDEDLGFVGEVTPVNPALLEALLEAGYIP 165
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEAD 142
++S +G GE N N A A A A+ A+KLI + D P +LD+ G LI LT EA+
Sbjct: 166 VISPIGVGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDDKGQLISELTASEAE 225
Query: 143 SLIRQRV 149
LI V
Sbjct: 226 ELIEDGV 232
|
Length = 283 |
| >gnl|CDD|236132 PRK07922, PRK07922, N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 8e-15
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 339
R A+ +D+ IK+++ P + L+ + L +A+ F+V E G+++ C AL +
Sbjct: 9 RRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMW- 67
Query: 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRE 397
E E+ + V P RG+G G +++ + A LGL +F+LT ++F GF E
Sbjct: 68 EDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTFEV-EFFARHGFVE 124
|
Length = 169 |
| >gnl|CDD|233118 TIGR00761, argB, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 2e-12
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
+ +HG ++ +G++ G A+ +D D G GE+KKV+ + L G +
Sbjct: 86 LNKHGINA----IGLTGGDGQLFTARY---LDKEDLGYVGEIKKVNKALIEALLKAGYIP 138
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESG-HLIRFLTLQEA 141
++S+L ++ G+ LN N A A A A+ A+KL+ + D P IL+ G LI + L E
Sbjct: 139 VISSLALTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDGQSLISEIPLDEI 198
Query: 142 DSLIRQRV 149
+ LI+Q +
Sbjct: 199 EQLIKQGI 206
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model [Amino acid biosynthesis, Glutamate family]. Length = 231 |
| >gnl|CDD|222185 pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 4e-11
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 317 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376
+ F V +G+I+ L P + + + V PE RGQG G KLL ++ ++ LG
Sbjct: 3 EHFLVAYDDGEIVGFLRLRPI--GEGAYIGGVAVDPEYRGQGYGSKLLRHLLEE---LGE 57
Query: 377 DMLFLLTTRTA-DWFKSRGFRE 397
LFL A +++ GF
Sbjct: 58 KPLFLFAHPQAKKFYEKLGFEP 79
|
This domain catalyzes N-acetyltransferase reactions. Length = 79 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 9e-11
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 36 VGVSVASGNFLAAKRK---GVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 92
VG+S GN + AK+K + + +D G GEV +V+ + L+ G + +++ +G
Sbjct: 111 VGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIPVIAPVGVGE 170
Query: 93 SGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDE---SGHLIRFLTLQEADSLIRQ 147
GE N N A A A A++A+KLI + D +LD+ G LI ++L+EA+ LI
Sbjct: 171 DGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPNDPGSLISEISLKEAEELIAD 229
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|216007 pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 2e-10
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 322 VEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 380
E +G+++ A+L + E+ + V PE RG+G G LL+ +E+ A LGL +
Sbjct: 1 AEEDGELVGFASLSIIDEEGNVAEIEGLAVDPEYRGKGIGTALLEALEEYARELGLKRIE 60
Query: 381 LLTT----RTADWFKSRGFR 396
L ++ GF+
Sbjct: 61 LEVLEDNEAAIALYEKLGFK 80
|
This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 80 |
| >gnl|CDD|173926 cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 3e-10
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 319 FYVVEREGQIIACAALFPF-FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
F V E +G+I+ A+L P + + V PE RG+G G LL+ E++A G
Sbjct: 1 FLVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAK 60
Query: 378 MLFL 381
L L
Sbjct: 61 RLRL 64
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransferase, Myristoyl-CoA: protein N-myristoyltransferase, and Acyl-homoserinelactone synthase which have a similar catalytic mechanism but differ in types of acyl groups transferred. Leucyl/phenylalanyl-tRNA-protein transferase and FemXAB nonribosomal peptidyltransferases which catalyze similar peptidyltransferase reactions are also included. Length = 65 |
| >gnl|CDD|237599 PRK14058, PRK14058, acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 5e-09
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 36 VGVSVASGNFLAAKRKGVV----DG----VDYGATGEVKKVDVTRMRERLDGGCLVILSN 87
VG+S G L KRK V +G + TG++++V+ ++ L G L +++
Sbjct: 97 VGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLKAGYLPVVAP 156
Query: 88 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL----DESGHLIRFLTLQEADS 143
S GE LN + A A A A++A+ L+ + D P L + G LI +T +EA+
Sbjct: 157 PALSEEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPDEGSLIERITPEEAEE 216
Query: 144 L 144
L
Sbjct: 217 L 217
|
Length = 268 |
| >gnl|CDD|239782 cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 1e-08
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 36 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95
VG+S+A G A + GA G+ D + + + L G L I+S++G G+
Sbjct: 96 VGLSLADGGMTAVT----QLDPELGAVGKATANDPSLLNDLLKAGFLPIISSIGADDQGQ 151
Query: 96 VLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQRV 149
++N N + ATA A + AD L+ + D +LD LI L ++A LI Q V
Sbjct: 152 LMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGV 205
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). Length = 252 |
| >gnl|CDD|178128 PLN02512, PLN02512, acetylglutamate kinase | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 2e-08
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 36 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95
VG+S G L A+ + D G GEV +VD T +R +D G + +++ + G+
Sbjct: 144 VGLSGKDGRLLRARPS--PNSADLGFVGEVTRVDPTVLRPLVDDGHIPVIATVAADEDGQ 201
Query: 96 VLNCNTYEVATACALAIEADKLICIIDGP-IL---DESGHLIRFLTLQEADSLI 145
N N A A A+ A+KLI + D +L D+ G L++ L ++ LI
Sbjct: 202 AYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKDDPGSLVKELDIKGVRKLI 255
|
Length = 309 |
| >gnl|CDD|223622 COG0548, ArgB, Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 212 EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTM 271
EQG GG + AA GV+RVH++ G + LLLELF RDG+GTM
Sbjct: 212 EQGIITGGMIPK---------VEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTM 262
Query: 272 VA 273
+
Sbjct: 263 IV 264
|
Length = 265 |
| >gnl|CDD|133644 CHL00202, argB, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 36 VGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95
VG+ N + A+ D D G GE+++VD + L+ + +++++ G+
Sbjct: 120 VGLCGKDANLIVARAS---DKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIASVAADHDGQ 176
Query: 96 VLNCNTYEVATACALAIEADKLICIIDGP-----ILDESGHLIRFLTLQEADSLIRQRV 149
N N VA A + A+KLI + D P I D + LI L ++EA +L +
Sbjct: 177 TYNINADVVAGEIAAKLNAEKLILLTDTPGILADINDPNS-LISTLNIKEARNLASTGI 234
|
Length = 284 |
| >gnl|CDD|239784 cd04251, AAK_NAGK-UC, AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 36 VGVSVASGNFLAAKRKGVV----DG----VDYGATGEVKKVDVTRMRERLDGGCLVILSN 87
VG++ G L AKRK +V G + G TG+V+KV+ + LD G L ++S
Sbjct: 93 VGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALLDAGYLPVVSP 152
Query: 88 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSL--- 144
+ YS GE LN + A A A A++A++LI + D L G +I +T+ +A+SL
Sbjct: 153 VAYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLDGRVIERITVSDAESLLEK 212
Query: 145 IRQRVKQSEIAANYVKAVAE 164
+K+ +AA +AV
Sbjct: 213 AGGGMKRKLLAA--AEAVEG 230
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). Length = 257 |
| >gnl|CDD|235306 PRK04531, PRK04531, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 70 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILDE 128
V + L G + ++++LG + SG++LN N A A++ K+I + G +LD
Sbjct: 119 VEAVESSLRAGSIPVIASLGETPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDA 178
Query: 129 SGHLIRFLTLQ-EADSLIRQ 147
G LI + L E D L++Q
Sbjct: 179 DGKLISSINLSTEYDHLMQQ 198
|
Length = 398 |
| >gnl|CDD|239785 cd04252, AAK_NAGK-fArgBP, AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 6e-06
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
+ R+G +R + SG F A +D YG G++ V+ + + G L
Sbjct: 84 LERNGARAR------PITSGVFEAE----YLDKDKYGLVGKITGVNKAPIEAAIRAGYLP 133
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTL-QEA 141
IL++L + SG++LN N A A +E K++ + + G +LD +G I + L +E
Sbjct: 134 ILTSLAETPSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGTGKKISAINLDEEY 193
Query: 142 DSLIRQ-------RVKQSEI 154
D L++Q ++K EI
Sbjct: 194 DDLMKQPWVKYGTKLKIKEI 213
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 248 |
| >gnl|CDD|223532 COG0456, RimI, Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 6e-06
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 11/88 (12%)
Query: 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA-----DWFKSRGFRE 397
G + + V PE RG+G G LLD ++ GL +L R + ++ GF
Sbjct: 92 GHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEV 151
Query: 398 CSIEMIPEERRKRINLSRNSKYYMKKLL 425
I R+ M K+L
Sbjct: 152 VKI------RKNYYADGNGDALLMLKML 173
|
Length = 177 |
| >gnl|CDD|234869 PRK00942, PRK00942, acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (107), Expect = 4e-05
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 275
+ AA R GV+ VH++DG + LLLELF +G+GTM+ D
Sbjct: 241 VEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVPD 283
|
Length = 283 |
| >gnl|CDD|222309 pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-05
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 21/124 (16%)
Query: 287 DLSGIKQIIQPLVES----------GALVRRTDEELLKALDS----FYVVEREGQIIACA 332
D+ + I +ES A R L + L +V ER G+I+ A
Sbjct: 1 DIPALAAIYNDAIESQPALYSPEQIAAWARLLPAVLAERLAEGSITGFVAERGGEIVGFA 60
Query: 333 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL-LTTRTADWFK 391
L P G + + V P RG+G G LLD IE +A G+ L + ++
Sbjct: 61 GLDPD-----GRLDLLYVRPRYRGRGIGRALLDAIEAEARK-GIKRLTTEASLLARPFYL 114
Query: 392 SRGF 395
GF
Sbjct: 115 RLGF 118
|
This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins. Length = 118 |
| >gnl|CDD|239771 cd04238, AAK_NAGK-like, AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 7e-05
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 272
AA + GV++VH++DG + LLLELF +G+GTM+
Sbjct: 218 EAALEAL-EGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). Length = 256 |
| >gnl|CDD|239783 cd04250, AAK_NAGK-C, AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 9e-05
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 272
+ A GV+ H++DG + LLLE+F +G+GTM+
Sbjct: 240 VEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino Acid Kinase Superfamily (AAK). Length = 279 |
| >gnl|CDD|222199 pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 2e-04
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 13/128 (10%)
Query: 281 RTAKVTDLSGIKQIIQP--LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF- 337
R DL ++++ VE L +G+++ AL+PF
Sbjct: 3 RPLTEDDLDEFLELLEYAFQVEDSPAEIWEYFRPLLEEGRVLGAFDDGKLVGQLALYPFR 62
Query: 338 -------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 390
+ G + + PE RG+G KLL + G + +L + +
Sbjct: 63 LNVPGKTYP--AGGITGVATYPEYRGRGLMRKLLRRALAEMRERGQPLSYLTPSSYP-IY 119
Query: 391 KSRGFREC 398
+ G+
Sbjct: 120 RRFGYEIA 127
|
This domain catalyzes N-acetyltransferase reactions. Length = 127 |
| >gnl|CDD|173920 cd02169, Citrate_lyase_ligase, Citrate lyase ligase | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 325 EGQIIACAALFPFFKE--KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 382
G++IA ++ KC + V P+ +G+G K++ + KA G+ LFL
Sbjct: 14 AGELIATGSIA---GNVLKC-----VAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLF 65
Query: 383 T-TRTADWFKSRGFRECSIEMIPEE----RRKRINLSRNSKYYMKKL 424
T + A +F+ GF+E + +E + + Y+K L
Sbjct: 66 TKPKNAKFFRGLGFKE--LANASDEAVLLENGKPGIED----YLKNL 106
|
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction. Length = 297 |
| >gnl|CDD|233477 TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 8e-04
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 319 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378
+ + G+++ A + E + I V PE +GQG G LL + +A G++
Sbjct: 33 YLLARIGGKVVGYAGVQIVLDE--AHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNE 90
Query: 379 LFLLTTRTAD-----WFKSRGFRE 397
+F L R ++ +K GF E
Sbjct: 91 IF-LEVRVSNIAAQALYKKLGFNE 113
|
Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database [Protein synthesis, Ribosomal proteins: synthesis and modification]. Length = 131 |
| >gnl|CDD|222116 pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 19/134 (14%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTD-------EELLKALDS-----FYVVEREGQI 328
R DL I ++ V + A+ D E L++ S F V E++G++
Sbjct: 2 RLLTEEDLEAILRLYSEYVHNTAITFEYDVPSEELFERFLESYLSENEYPFGVFEKDGEL 61
Query: 329 IACAALFPFFKEK-CGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLTTRT 386
I A L F + E+ + + +G G KLL+ + + A ++ +
Sbjct: 62 IGYATLRQFDAYRHKAEL-SFYFVKDNNDEGLGRKLLNALIEYAFKEQNIENILACIASN 120
Query: 387 ----ADWFKSRGFR 396
+ K GF
Sbjct: 121 NISAIVFLKKLGFE 134
|
Length = 154 |
| >gnl|CDD|239033 cd02115, AAK, Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.003
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 12/123 (9%)
Query: 58 DYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSS---GEVLNCNTYEVATACALAIEA 114
+ G G++ KV R++ L+ G L ILS G + G + + A A A++A
Sbjct: 106 NQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEKETGTLGRGGSDSTAALLAAALKA 165
Query: 115 DKLICI--IDG-----PILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 167
D+L+ + +DG P L+ LT +EA L + A A I
Sbjct: 166 DRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYAGAMVLKPKA--ADPAARAGI 223
Query: 168 TCF 170
Sbjct: 224 PVR 226
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. Length = 248 |
| >gnl|CDD|216067 pfam00696, AA_kinase, Amino acid kinase family | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 64 EVKKVDVTRMRERLDGGCLVILSNLGYSS----SGEVLNCNTYEVATACALAIEADKLIC 119
+ VD ++E L+ G + +++ G + + + ++ +A A A+ ADKLI
Sbjct: 107 RLDLVDTEAIKELLEAGVVPVITGFGGENDTGETTTLGRGSSDTLAALLAEALGADKLII 166
Query: 120 I--IDG-----PILDESGHLIRFLTLQEADSLIRQ 147
+ +DG P + LI L+ EA+ L+
Sbjct: 167 LTDVDGVYTADPRKNPDAKLIPELSYDEAEELLAA 201
|
This family includes kinases that phosphorylate a variety of amino acid substrates, as well as uridylate kinase and carbamate kinase. This family includes: Aspartokinase EC:2.7.2.4, Acetylglutamate kinase EC:2.7.2.8, Glutamate 5-kinase EC:2.7.2.11, Uridylate kinase EC:2.7.4.-, Carbamate kinase EC:2.7.2.2. Length = 230 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 438 | |||
| PLN02825 | 515 | amino-acid N-acetyltransferase | 100.0 | |
| TIGR01890 | 429 | N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi | 100.0 | |
| PRK05279 | 441 | N-acetylglutamate synthase; Validated | 100.0 | |
| COG0548 | 265 | ArgB Acetylglutamate kinase [Amino acid transport | 100.0 | |
| cd04237 | 280 | AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) | 100.0 | |
| cd04236 | 271 | AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NA | 99.98 | |
| CHL00202 | 284 | argB acetylglutamate kinase; Provisional | 99.97 | |
| PRK00942 | 283 | acetylglutamate kinase; Provisional | 99.96 | |
| cd04238 | 256 | AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate | 99.96 | |
| PLN02512 | 309 | acetylglutamate kinase | 99.96 | |
| cd04250 | 279 | AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase | 99.96 | |
| cd04252 | 248 | AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutam | 99.96 | |
| cd04251 | 257 | AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kina | 99.96 | |
| cd04249 | 252 | AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kina | 99.95 | |
| PRK14058 | 268 | acetylglutamate/acetylaminoadipate kinase; Provisi | 99.95 | |
| PRK12352 | 316 | putative carbamate kinase; Reviewed | 99.95 | |
| KOG2436 | 520 | consensus Acetylglutamate kinase/acetylglutamate s | 99.94 | |
| PRK04531 | 398 | acetylglutamate kinase; Provisional | 99.93 | |
| TIGR00761 | 231 | argB acetylglutamate kinase. This model describes | 99.93 | |
| COG1246 | 153 | ArgA N-acetylglutamate synthase and related acetyl | 99.9 | |
| cd04241 | 252 | AAK_FomA-like AAK_FomA-like: This CD includes a fo | 99.86 | |
| cd02115 | 248 | AAK Amino Acid Kinases (AAK) superfamily, catalyti | 99.82 | |
| PRK12353 | 314 | putative amino acid kinase; Reviewed | 99.77 | |
| cd04260 | 244 | AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase | 99.76 | |
| PRK12686 | 312 | carbamate kinase; Reviewed | 99.75 | |
| cd04261 | 239 | AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kina | 99.75 | |
| cd04246 | 239 | AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kina | 99.74 | |
| PRK09411 | 297 | carbamate kinase; Reviewed | 99.74 | |
| PRK12454 | 313 | carbamate kinase-like carbamoyl phosphate syntheta | 99.73 | |
| PRK07757 | 152 | acetyltransferase; Provisional | 99.7 | |
| cd04242 | 251 | AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K | 99.7 | |
| cd04256 | 284 | AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase | 99.69 | |
| PF00696 | 242 | AA_kinase: Amino acid kinase family Match to Gluta | 99.68 | |
| PRK05429 | 372 | gamma-glutamyl kinase; Provisional | 99.68 | |
| TIGR00746 | 310 | arcC carbamate kinase. The seed alignment for this | 99.68 | |
| PRK12354 | 307 | carbamate kinase; Reviewed | 99.67 | |
| PRK12314 | 266 | gamma-glutamyl kinase; Provisional | 99.67 | |
| PRK10146 | 144 | aminoalkylphosphonic acid N-acetyltransferase; Pro | 99.66 | |
| cd04235 | 308 | AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes bot | 99.64 | |
| cd04234 | 227 | AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK) | 99.64 | |
| PTZ00489 | 264 | glutamate 5-kinase; Provisional | 99.63 | |
| PRK13402 | 368 | gamma-glutamyl kinase; Provisional | 99.63 | |
| PRK08210 | 403 | aspartate kinase I; Reviewed | 99.62 | |
| PRK07922 | 169 | N-acetylglutamate synthase; Validated | 99.61 | |
| COG0263 | 369 | ProB Glutamate 5-kinase [Amino acid transport and | 99.6 | |
| PTZ00330 | 147 | acetyltransferase; Provisional | 99.59 | |
| PRK06635 | 404 | aspartate kinase; Reviewed | 99.58 | |
| PRK12308 | 614 | bifunctional argininosuccinate lyase/N-acetylgluta | 99.58 | |
| TIGR00656 | 401 | asp_kin_monofn aspartate kinase, monofunctional cl | 99.57 | |
| TIGR01027 | 363 | proB glutamate 5-kinase. Bacterial ProB proteins h | 99.56 | |
| PF13527 | 127 | Acetyltransf_9: Acetyltransferase (GNAT) domain; P | 99.54 | |
| PRK03624 | 140 | putative acetyltransferase; Provisional | 99.54 | |
| TIGR00657 | 441 | asp_kinases aspartate kinase. The Lys-sensitive en | 99.54 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 99.54 | |
| PRK08841 | 392 | aspartate kinase; Validated | 99.54 | |
| COG1608 | 252 | Predicted archaeal kinase [General function predic | 99.54 | |
| cd04244 | 298 | AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kina | 99.53 | |
| TIGR03827 | 266 | GNAT_ablB putative beta-lysine N-acetyltransferase | 99.52 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 99.52 | |
| PRK07431 | 587 | aspartate kinase; Provisional | 99.49 | |
| KOG3216 | 163 | consensus Diamine acetyltransferase [Amino acid tr | 99.49 | |
| PRK09491 | 146 | rimI ribosomal-protein-alanine N-acetyltransferase | 99.49 | |
| PRK10140 | 162 | putative acetyltransferase YhhY; Provisional | 99.47 | |
| PLN02706 | 150 | glucosamine 6-phosphate N-acetyltransferase | 99.47 | |
| PF13673 | 117 | Acetyltransf_10: Acetyltransferase (GNAT) domain; | 99.46 | |
| TIGR02382 | 191 | wecD_rffC TDP-D-fucosamine acetyltransferase. This | 99.46 | |
| PF00583 | 83 | Acetyltransf_1: Acetyltransferase (GNAT) family; I | 99.46 | |
| COG0549 | 312 | ArcC Carbamate kinase [Amino acid transport and me | 99.46 | |
| PHA00673 | 154 | acetyltransferase domain containing protein | 99.45 | |
| cd04240 | 203 | AAK_UC AAK_UC: Uncharacterized (UC) amino acid kin | 99.45 | |
| cd04255 | 262 | AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes th | 99.45 | |
| PRK09831 | 147 | putative acyltransferase; Provisional | 99.45 | |
| TIGR02406 | 157 | ectoine_EctA L-2,4-diaminobutyric acid acetyltrans | 99.44 | |
| PRK06291 | 465 | aspartate kinase; Provisional | 99.44 | |
| PF13523 | 152 | Acetyltransf_8: Acetyltransferase (GNAT) domain; P | 99.44 | |
| PF13420 | 155 | Acetyltransf_4: Acetyltransferase (GNAT) domain; P | 99.43 | |
| KOG1154 | 285 | consensus Gamma-glutamyl kinase [Amino acid transp | 99.42 | |
| COG1247 | 169 | Sortase and related acyltransferases [Cell envelop | 99.41 | |
| PRK10975 | 194 | TDP-fucosamine acetyltransferase; Provisional | 99.41 | |
| KOG3139 | 165 | consensus N-acetyltransferase [General function pr | 99.39 | |
| TIGR01575 | 131 | rimI ribosomal-protein-alanine acetyltransferase. | 99.37 | |
| PF13508 | 79 | Acetyltransf_7: Acetyltransferase (GNAT) domain; P | 99.37 | |
| PRK10314 | 153 | putative acyltransferase; Provisional | 99.37 | |
| cd04239 | 229 | AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-lik | 99.36 | |
| PRK10514 | 145 | putative acetyltransferase; Provisional | 99.35 | |
| TIGR02076 | 221 | pyrH_arch uridylate kinase, putative. This family | 99.33 | |
| TIGR03103 | 547 | trio_acet_GNAT GNAT-family acetyltransferase TIGR0 | 99.31 | |
| cd04253 | 221 | AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMP | 99.31 | |
| cd04254 | 231 | AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbi | 99.3 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.3 | |
| PRK00358 | 231 | pyrH uridylate kinase; Provisional | 99.29 | |
| COG0456 | 177 | RimI Acetyltransferases [General function predicti | 99.28 | |
| COG3153 | 171 | Predicted acetyltransferase [General function pred | 99.26 | |
| PRK10151 | 179 | ribosomal-protein-L7/L12-serine acetyltransferase; | 99.25 | |
| PRK15130 | 186 | spermidine N1-acetyltransferase; Provisional | 99.24 | |
| TIGR03585 | 156 | PseH pseudaminic acid biosynthesis N-acetyl transf | 99.23 | |
| PRK01346 | 411 | hypothetical protein; Provisional | 99.23 | |
| PRK10562 | 145 | putative acetyltransferase; Provisional | 99.22 | |
| PRK08373 | 341 | aspartate kinase; Validated | 99.21 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 99.2 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 99.18 | |
| PRK14558 | 231 | pyrH uridylate kinase; Provisional | 99.18 | |
| PHA01807 | 153 | hypothetical protein | 99.18 | |
| KOG3396 | 150 | consensus Glucosamine-phosphate N-acetyltransferas | 99.17 | |
| COG0527 | 447 | LysC Aspartokinases [Amino acid transport and meta | 99.15 | |
| PF13302 | 142 | Acetyltransf_3: Acetyltransferase (GNAT) domain; P | 99.15 | |
| PRK13688 | 156 | hypothetical protein; Provisional | 99.12 | |
| cd02169 | 297 | Citrate_lyase_ligase Citrate lyase ligase. Citrate | 99.12 | |
| PRK10809 | 194 | ribosomal-protein-S5-alanine N-acetyltransferase; | 99.11 | |
| cd04259 | 295 | AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Super | 99.08 | |
| TIGR02075 | 233 | pyrH_bact uridylate kinase. This protein, also cal | 99.07 | |
| cd04245 | 288 | AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Ki | 99.04 | |
| TIGR02078 | 327 | AspKin_pair Pyrococcus aspartate kinase subunit, p | 99.02 | |
| TIGR00124 | 332 | cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP | 99.01 | |
| cd04243 | 293 | AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kina | 99.0 | |
| KOG3235 | 193 | consensus Subunit of the major N alpha-acetyltrans | 98.99 | |
| cd04257 | 294 | AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfa | 98.97 | |
| PRK14557 | 247 | pyrH uridylate kinase; Provisional | 98.91 | |
| PRK05925 | 440 | aspartate kinase; Provisional | 98.84 | |
| PRK09034 | 454 | aspartate kinase; Reviewed | 98.81 | |
| PRK09084 | 448 | aspartate kinase III; Validated | 98.78 | |
| COG2153 | 155 | ElaA Predicted acyltransferase [General function p | 98.77 | |
| PRK14556 | 249 | pyrH uridylate kinase; Provisional | 98.76 | |
| cd04258 | 292 | AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Ki | 98.74 | |
| PF08445 | 86 | FR47: FR47-like protein; InterPro: IPR013653 Prote | 98.73 | |
| PRK08961 | 861 | bifunctional aspartate kinase/diaminopimelate deca | 98.71 | |
| PLN02551 | 521 | aspartokinase | 98.68 | |
| PRK09436 | 819 | thrA bifunctional aspartokinase I/homoserine dehyd | 98.68 | |
| KOG2488 | 202 | consensus Acetyltransferase (GNAT) domain-containi | 98.66 | |
| KOG3397 | 225 | consensus Acetyltransferases [General function pre | 98.65 | |
| cd04247 | 306 | AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfa | 98.63 | |
| KOG3138 | 187 | consensus Predicted N-acetyltransferase [General f | 98.62 | |
| COG3393 | 268 | Predicted acetyltransferase [General function pred | 98.61 | |
| KOG3234 | 173 | consensus Acetyltransferase, (GNAT) family [Genera | 98.58 | |
| cd04301 | 65 | NAT_SF N-Acyltransferase superfamily: Various enzy | 98.55 | |
| COG3981 | 174 | Predicted acetyltransferase [General function pred | 98.52 | |
| PRK09466 | 810 | metL bifunctional aspartate kinase II/homoserine d | 98.49 | |
| COG1670 | 187 | RimL Acetyltransferases, including N-acetylases of | 98.45 | |
| TIGR01211 | 522 | ELP3 histone acetyltransferase, ELP3 family. The S | 98.44 | |
| PF14542 | 78 | Acetyltransf_CG: GCN5-related N-acetyl-transferase | 98.38 | |
| COG3818 | 167 | Predicted acetyltransferase, GNAT superfamily [Gen | 98.23 | |
| PRK09181 | 475 | aspartate kinase; Validated | 98.22 | |
| PF13718 | 196 | GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2Z | 98.2 | |
| cd04248 | 304 | AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase S | 98.16 | |
| COG3053 | 352 | CitC Citrate lyase synthetase [Energy production a | 98.13 | |
| PF12746 | 265 | GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S | 97.98 | |
| COG0528 | 238 | PyrH Uridylate kinase [Nucleotide transport and me | 97.88 | |
| PF12568 | 128 | DUF3749: Acetyltransferase (GNAT) domain; InterPro | 97.86 | |
| KOG4144 | 190 | consensus Arylalkylamine N-acetyltransferase [Gene | 97.83 | |
| COG2388 | 99 | Predicted acetyltransferase [General function pred | 97.76 | |
| COG1444 | 758 | Predicted P-loop ATPase fused to an acetyltransfer | 97.7 | |
| PF04958 | 342 | AstA: Arginine N-succinyltransferase beta subunit; | 97.69 | |
| PF04768 | 170 | DUF619: Protein of unknown function (DUF619); Inte | 97.68 | |
| COG2054 | 212 | Uncharacterized archaeal kinase related to asparto | 97.66 | |
| COG4552 | 389 | Eis Predicted acetyltransferase involved in intrac | 97.59 | |
| PRK10456 | 344 | arginine succinyltransferase; Provisional | 97.45 | |
| PF00765 | 182 | Autoind_synth: Autoinducer synthetase; InterPro: I | 97.43 | |
| TIGR03694 | 241 | exosort_acyl putative PEP-CTERM/exosortase system- | 97.26 | |
| COG0454 | 156 | WecD Histone acetyltransferase HPA2 and related ac | 97.25 | |
| PF08444 | 89 | Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt | 97.2 | |
| TIGR03245 | 336 | arg_AOST_alph arginine/ornithine succinyltransfera | 97.12 | |
| TIGR03243 | 335 | arg_catab_AOST arginine and ornithine succinyltran | 97.1 | |
| TIGR03244 | 336 | arg_catab_AstA arginine N-succinyltransferase. In | 97.07 | |
| KOG4135 | 185 | consensus Predicted phosphoglucosamine acetyltrans | 96.99 | |
| PRK13834 | 207 | putative autoinducer synthesis protein; Provisiona | 96.94 | |
| PF13480 | 142 | Acetyltransf_6: Acetyltransferase (GNAT) domain | 96.89 | |
| PF06852 | 181 | DUF1248: Protein of unknown function (DUF1248); In | 96.89 | |
| COG3916 | 209 | LasI N-acyl-L-homoserine lactone synthetase [Signa | 96.26 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 96.22 | |
| COG5628 | 143 | Predicted acetyltransferase [General function pred | 95.82 | |
| COG1243 | 515 | ELP3 Histone acetyltransferase [Transcription / Ch | 95.17 | |
| PF02799 | 190 | NMT_C: Myristoyl-CoA:protein N-myristoyltransferas | 94.41 | |
| COG3138 | 336 | AstA Arginine/ornithine N-succinyltransferase beta | 94.29 | |
| PRK01305 | 240 | arginyl-tRNA-protein transferase; Provisional | 93.79 | |
| PF01853 | 188 | MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz i | 93.64 | |
| COG3375 | 266 | Uncharacterized conserved protein [Function unknow | 93.61 | |
| KOG0456 | 559 | consensus Aspartate kinase [Amino acid transport a | 93.52 | |
| PF13880 | 70 | Acetyltransf_13: ESCO1/2 acetyl-transferase | 93.48 | |
| cd04264 | 99 | DUF619-NAGS DUF619 domain of various N-acetylgluta | 93.32 | |
| PF01233 | 162 | NMT: Myristoyl-CoA:protein N-myristoyltransferase, | 93.21 | |
| PF04377 | 128 | ATE_C: Arginine-tRNA-protein transferase, C termin | 92.99 | |
| KOG2535 | 554 | consensus RNA polymerase II elongator complex, sub | 92.66 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 92.48 | |
| TIGR03019 | 330 | pepcterm_femAB FemAB-related protein, PEP-CTERM sy | 92.46 | |
| KOG2779 | 421 | consensus N-myristoyl transferase [Lipid transport | 91.8 | |
| cd04265 | 99 | DUF619-NAGS-U DUF619 domain of various N-acetylglu | 91.71 | |
| PTZ00064 | 552 | histone acetyltransferase; Provisional | 91.71 | |
| KOG2036 | 1011 | consensus Predicted P-loop ATPase fused to an acet | 91.5 | |
| PLN03238 | 290 | probable histone acetyltransferase MYST; Provision | 91.21 | |
| PLN03239 | 351 | histone acetyltransferase; Provisional | 88.76 | |
| PF05301 | 120 | Mec-17: Touch receptor neuron protein Mec-17; Inte | 88.29 | |
| PLN00104 | 450 | MYST -like histone acetyltransferase; Provisional | 87.54 | |
| COG2401 | 593 | ABC-type ATPase fused to a predicted acetyltransfe | 86.02 | |
| PF12261 | 179 | T_hemolysin: Thermostable hemolysin; InterPro: IPR | 83.02 | |
| PF09390 | 161 | DUF1999: Protein of unknown function (DUF1999); In | 82.8 | |
| PF09924 | 299 | DUF2156: Uncharacterized conserved protein (DUF215 | 82.1 | |
| TIGR03827 | 266 | GNAT_ablB putative beta-lysine N-acetyltransferase | 81.78 | |
| PHA01733 | 153 | hypothetical protein | 81.31 | |
| PF13444 | 101 | Acetyltransf_5: Acetyltransferase (GNAT) domain | 80.16 |
| >PLN02825 amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-77 Score=622.38 Aligned_cols=416 Identities=81% Similarity=1.254 Sum_probs=378.3
Q ss_pred CccccchhhhhHhhhCCCCCcccccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCC
Q 013702 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGG 80 (438)
Q Consensus 1 ~~~~g~~~~~~~a~ls~~~~l~~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g 80 (438)
|+++|.+|..|++.||+++++-.|+++|++.+++.+||++.|||+++|+|++++|++||||||+|++||++.|+.+|++|
T Consensus 90 ~~~~G~v~~~i~a~Ls~~~~v~~l~~~G~~a~~~~~gl~~~~Gn~v~a~~~gv~dgvD~g~vG~V~~Vd~~~i~~~L~~g 169 (515)
T PLN02825 90 MEAAGKIRVMIEAKLSPGPSIPNLRRHGDNSRWHEVGVSVASGNFLAAKRRGVVNGVDFGATGEVKKIDVSRIKERLDSN 169 (515)
T ss_pred HHHHHHHHHHHHHhhccccchhHHHhcCCCCccccCceEeccCcEEEEEECCCCcCccccceeeEEEEcHHHHHHHHhCC
Confidence 46899999999999999998669999999988888999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCccccCCCcccccCCHHHHHHHHHhhhhhhhHHHhHhh
Q 013702 81 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVK 160 (438)
Q Consensus 81 ~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~ 160 (438)
.||||+|+|++++|+++|||+|++|+++|.+|+|+|||||||+++++.++++|++|+.+|++++++++..|+.++|++.+
T Consensus 170 ~Ipvisplg~s~~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~~~~~~g~li~~l~~~e~~~li~~~~~~~~~~~~~~~ 249 (515)
T PLN02825 170 CIVLLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIVDGPILDENGRLIRFMTLEEADMLIRKRAKQSEIAANYVK 249 (515)
T ss_pred CeEEECCceECCCCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcceecCCCCCcCcCCHHHHHHHHHhhhhcchhhhhhhh
Confidence 99999999999999999999999999999999999999999999888999999999999999999887778889999999
Q ss_pred hhhcccccc---cCCC-------CCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccch
Q 013702 161 AVAEEDITC---FGHS-------DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 230 (438)
Q Consensus 161 ~~~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 230 (438)
|+++++.+. +..+ ++.+.|- +.+....|.++.+++++.|. +..++|++|++|++++..+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 320 (515)
T PLN02825 250 AVGGEDYSYSLGLDSVNTTPFNNNGRGFWG--------SGSATDSFQNGVGFDNGNGL-SGEQGFAIGGEERLSRLNGYL 320 (515)
T ss_pred hccccccccccccccccccccccccccccc--------cccccccccccccccCcccc-cccccccccchhhchhhhhHH
Confidence 998886442 1100 0001110 01222335566666665552 567899999999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHH
Q 013702 231 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE 310 (438)
Q Consensus 231 ~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e 310 (438)
.||.+|++||+.||+|+||+|++.+++||.||||++|.||+|++++|..||+++.+|++.|.+|++++...+....++++
T Consensus 321 ~~l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~~~e~IR~At~eDi~~I~~Li~~lee~g~lv~rs~e 400 (515)
T PLN02825 321 SELAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASDMYEGTRMARVEDLAGIRQIIRPLEESGILVRRTDE 400 (515)
T ss_pred HHHHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccChHhhheeCCHHHHHHHHHHHHHHHHcCCCcCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888889999
Q ss_pred HHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHH
Q 013702 311 ELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 390 (438)
Q Consensus 311 ~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY 390 (438)
.++.++.++++++.|++++||+.++++.+...++|.+++|+|+|||+|+|++||++++++|+++|++.+++.++++.+||
T Consensus 401 ~le~ei~~f~V~e~Dg~IVG~aal~~~~~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt~a~~fY 480 (515)
T PLN02825 401 ELLRALDSFVVVEREGSIIACAALFPFFEEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTTRTADWF 480 (515)
T ss_pred HHHhcCCcEEEEEECCEEEEEEEEEeecCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCcHHHHH
Confidence 99999999999999999999999998877788999999999999999999999999999999999999999999999999
Q ss_pred HHCCCeEeceeccchHhhhhhcCCCCceEEEEccC
Q 013702 391 KSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 425 (438)
Q Consensus 391 ~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll 425 (438)
+++||++++...||..++..||++|+|++|||++.
T Consensus 481 ~k~GF~~~~~~~lp~~~~~~yn~~r~sk~~~k~l~ 515 (515)
T PLN02825 481 VRRGFSECSIESLPEARRKRINLSRGSKYYMKKLL 515 (515)
T ss_pred HHCCCEEeChhhCCHHHHhhcCccCCcEEEEEecC
Confidence 99999999999999999999999999999999873
|
|
| >TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-60 Score=491.06 Aligned_cols=337 Identities=43% Similarity=0.730 Sum_probs=306.1
Q ss_pred cccchhhhhHhhhCCCCCcccccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCce
Q 013702 3 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 82 (438)
Q Consensus 3 ~~g~~~~~~~a~ls~~~~l~~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~I 82 (438)
++|.++..+++.|+.+.. ..++.++|++|.||++++|+|+++.+++|+|+||+|++||++.|+.+|++|+|
T Consensus 92 ~~g~vn~~l~~~l~~~~~---------~~~~~~~~l~~~dg~~~~a~~~~~~~~~~~g~~G~v~~v~~~~l~~ll~~g~i 162 (429)
T TIGR01890 92 AAGTLRLAIEARLSMSLS---------NTPMAGSRLPVVSGNFVTARPIGVIEGVDYEHTGVIRKIDTEGIRRQLDAGSI 162 (429)
T ss_pred HhChHHHHHHHHHHhcCC---------cccccccCceEccceEEEEEECCCCcCccccccceEEEEcHHHHHHHHHCCCe
Confidence 367777777777765533 33444678999999999999998778899999999999999999999999999
Q ss_pred EEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhh
Q 013702 83 VILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKA 161 (438)
Q Consensus 83 PVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~ 161 (438)
||++|++++.+|+.+|||+|++|++||.+|+|+||+|+|||+|+. +++++|++|+.+|++++++...
T Consensus 163 pvi~pi~~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~~g~~i~~i~~~~~~~l~~~~~------------ 230 (429)
T TIGR01890 163 VLLSPLGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDPDGTLAAELSPQEVESLAERLG------------ 230 (429)
T ss_pred EEECCcccCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCcccCCHHHHHHHHHhcc------------
Confidence 999999999999999999999999999999999999999999875 5799999999999999986521
Q ss_pred hhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHH
Q 013702 162 VAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 241 (438)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (438)
| || |.+||++|..|++
T Consensus 231 -------------------------------------------~-~~--------------------~~~kl~~a~~a~~ 246 (429)
T TIGR01890 231 -------------------------------------------S-ET--------------------TRRLLSAAVKACR 246 (429)
T ss_pred -------------------------------------------C-CC--------------------cHHHHHHHHHHHH
Confidence 1 21 5899999999999
Q ss_pred cCCCeEEeeccccCceeeeehhhcCCCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEE
Q 013702 242 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYV 321 (438)
Q Consensus 242 ~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V 321 (438)
.||+++||+|++.|++++.+||+++|.||+|..++|+.||+++.+|++.+.+++++.....+..++..+.+..+...+++
T Consensus 247 ~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d~y~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~V 326 (429)
T TIGR01890 247 GGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKEAFESIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSI 326 (429)
T ss_pred cCCCeEEEECCCCCcHHHHHHhcCCCCcceEeccchhheEECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcCcEEE
Confidence 99999999999999999999999999999999999999999999999999999998877777677788888888888889
Q ss_pred EEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEecee
Q 013702 322 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 401 (438)
Q Consensus 322 ~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~ 401 (438)
++.+++++||+.+.++.+...++|..++|+|+|||+|+|++||++++++|+++|++.+++.++.+.+||+|+||+.++..
T Consensus 327 ~~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~~~a~~fY~k~GF~~~g~~ 406 (429)
T TIGR01890 327 IEHDGNIIGCAALYPYAEEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLTTRTGHWFRERGFQTASVD 406 (429)
T ss_pred EEECCEEEEEEEEEecCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeecchHHHHHHCCCEECChh
Confidence 99999999999998776667889999999999999999999999999999999999998887778999999999999999
Q ss_pred ccchHhhhhhcCCCCceEEEEcc
Q 013702 402 MIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 402 ~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
++|..+++.|+++|++++|||++
T Consensus 407 ~l~~~~~~~~~~~r~~~~~~~~~ 429 (429)
T TIGR01890 407 ELPEARRKLYNYQRNSKILMKRL 429 (429)
T ss_pred hCCHHHHHHhcccccCceeeecC
Confidence 99999999999999999999975
|
This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate. |
| >PRK05279 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-57 Score=471.55 Aligned_cols=341 Identities=47% Similarity=0.753 Sum_probs=306.1
Q ss_pred cccchhhhhHhhhCCCCCcccccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCce
Q 013702 3 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 82 (438)
Q Consensus 3 ~~g~~~~~~~a~ls~~~~l~~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~I 82 (438)
+.|.+...+++.|+.+++ ..++.+.++++.||+++.|+|.++.++.|||++|+|+.||++.|+.||++|+|
T Consensus 100 ~~g~v~~~l~~~l~~g~~---------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~v~~v~~~~i~~ll~~g~i 170 (441)
T PRK05279 100 AAGELRLDIEARLSMGLP---------NTPMAGAHIRVVSGNFVTARPLGVDDGVDYQHTGEVRRIDAEAIRRQLDSGAI 170 (441)
T ss_pred HHHHHHHHHHHHHhccCC---------CCcccCCcceEeeccEEEEEECCCCCCccccceeeEEEEeHHHHHHHHHCCCe
Confidence 346777888888876655 33444667999999999999998778899999999999999999999999999
Q ss_pred EEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhh
Q 013702 83 VILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKA 161 (438)
Q Consensus 83 PVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~ 161 (438)
||++|++.+++|+.+|||+|++|++||.+|+|++|+|+|||+|+. +++++|++++.+++++++..-.
T Consensus 171 pV~~~i~~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~~~~~i~~i~~~~~~~~~~~~~------------ 238 (441)
T PRK05279 171 VLLSPLGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDEDGELIRELSPNEAQALLEALE------------ 238 (441)
T ss_pred EEECCceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCCCchhhhCCHHHHHHHHhhhh------------
Confidence 999999999999999999999999999999999999999999874 5799999999999999875210
Q ss_pred hhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHH
Q 013702 162 VAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 241 (438)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (438)
.|.| +| | |.+||++|..|++
T Consensus 239 --------------~~~~------------------------~g-g---------------------M~~Kv~~a~~~~~ 258 (441)
T PRK05279 239 --------------DGDY------------------------NS-G---------------------TARFLRAAVKACR 258 (441)
T ss_pred --------------cCCC------------------------Cc-c---------------------HHHHHHHHHHHHH
Confidence 0001 22 4 9999999999999
Q ss_pred cCCCeEEeeccccCceeeeehhhcCCCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEE
Q 013702 242 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYV 321 (438)
Q Consensus 242 ~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V 321 (438)
+||+++||+|++.|++|+.++|+.+|.||+|.++.|+.||+++.+|++.+.+++.+.....+..+++.+.+..+...+++
T Consensus 259 ~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~~y~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~v 338 (441)
T PRK05279 259 GGVRRSHLISYAEDGALLQELFTRDGIGTMIVMESLEQLRRATIDDVGGILELIRPLEEQGILVRRSREQLEREIDKFTV 338 (441)
T ss_pred cCCCEEEEecCCCCcHHHHHHhcCCCCceEEecCchHHeEeCCHHHHHHHHHHHHHHHHcCCccccCHHHHhcccCcEEE
Confidence 99999999999999999999999999999999999999999999999999999988777676667788888877788899
Q ss_pred EEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEecee
Q 013702 322 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 401 (438)
Q Consensus 322 ~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~ 401 (438)
++++++++||+.+.++.....++|..++|+|+|||+|+|++||++++++|++.|++.+++.++++.+||+|+||+..+..
T Consensus 339 a~~dg~iVG~~~~~~~~~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~~~a~~fY~k~GF~~~g~~ 418 (441)
T PRK05279 339 IERDGLIIGCAALYPFPEEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLTTRTAHWFLERGFVPVDVD 418 (441)
T ss_pred EEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEecchHHHHHHHCcCEECChh
Confidence 99999999999988665556789999999999999999999999999999999999998888888999999999999999
Q ss_pred ccchHhhhhhcCCCCceEEEEcc
Q 013702 402 MIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 402 ~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
.+|..++..|+++|+|++|+|++
T Consensus 419 ~~~~~~~~~y~~~r~~~~~~~~~ 441 (441)
T PRK05279 419 DLPEAKRQLYNYQRRSKVLVKDL 441 (441)
T ss_pred hCcHHHHHhhCcccCceeeeecC
Confidence 99999999999999999999975
|
|
| >COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=315.56 Aligned_cols=179 Identities=38% Similarity=0.607 Sum_probs=165.2
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~ 95 (438)
.+..|+ .|+++|.+ |+||||.|||+++|+|+++.+++||||||+|++||++.|+.+|++|+||||+|++++++|+
T Consensus 83 vNk~iva~l~~~g~~----avGlsg~Dg~li~A~~~~~~~~id~g~vG~i~~Vn~~~i~~ll~~~~IpViapia~~~~G~ 158 (265)
T COG0548 83 VNKEIVARLSKHGGQ----AVGLSGVDGNLVTAKKLDVDDGVDLGYVGEIRKVNPELIERLLDNGAIPVIAPIAVDEDGE 158 (265)
T ss_pred HHHHHHHHHHHhCCc----ceeeeecCCCEEEEEEcccccccccceeeeEEEECHHHHHHHHhCCCceEEecceECCCCc
Confidence 667777 88888875 9999999999999999998888999999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHHHcCCCEEEEEecCccccC-CCc--ccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCC
Q 013702 96 VLNCNTYEVATACALAIEADKLICIIDGPILDE-SGH--LIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGH 172 (438)
Q Consensus 96 ~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~~-~~~--~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (438)
.+|+|+|++|+++|.+|+|+||+||||++|+.. .+. +|+.++.+|++++++++.
T Consensus 159 ~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~~~s~i~~~~~~~~~~li~~~~----------------------- 215 (265)
T COG0548 159 TLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKGDPSLISELDAEEAEELIEQGI----------------------- 215 (265)
T ss_pred EEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCCCceeeccCCHHHHHHHHhcCC-----------------------
Confidence 999999999999999999999999999998743 343 999999999999998864
Q ss_pred CCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecc
Q 013702 173 SDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDG 252 (438)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g 252 (438)
+++ | |.+||++|+.||+.||+|+||+||
T Consensus 216 ------i~~-------------------------G---------------------Mi~Kv~~a~~A~~~Gv~~v~ii~g 243 (265)
T COG0548 216 ------ITG-------------------------G---------------------MIPKVEAALEALESGVRRVHIISG 243 (265)
T ss_pred ------ccC-------------------------c---------------------cHHHHHHHHHHHHhCCCeEEEecC
Confidence 222 4 899999999999999999999999
Q ss_pred ccCceeeeehhhcCCCcccccC
Q 013702 253 TIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 253 ~~~~~ll~el~~~~g~GT~i~~ 274 (438)
+.+++++.|||++.|.||+|.+
T Consensus 244 ~~~~~ll~eLFt~~giGT~i~~ 265 (265)
T COG0548 244 RVPHSLLLELFTRDGIGTMIVR 265 (265)
T ss_pred CCcchHHHHHhcCCCcceEecC
Confidence 9999999999999999999863
|
|
| >cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=274.20 Aligned_cols=187 Identities=50% Similarity=0.761 Sum_probs=166.5
Q ss_pred cccchhhhhHhhhCCCCCcccccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCce
Q 013702 3 AAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCL 82 (438)
Q Consensus 3 ~~g~~~~~~~a~ls~~~~l~~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~I 82 (438)
+.|.+...+++.|+.++. ..++.+.++++.|++++.++|.++.++.||||+|+|+.+|++.|+.||++|+|
T Consensus 93 ~~g~v~~~l~~~l~~~~~---------a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~g~~G~v~~v~~~~i~~lL~~g~i 163 (280)
T cd04237 93 AAGAVRLEIEALLSMGLP---------NSPMAGARIRVVSGNFVTARPLGVVDGVDFGHTGEVRRIDADAIRRQLDQGSI 163 (280)
T ss_pred HHHHHHHHHHHHHHhhcc---------ccCcCCCceEEecCeEEEEEECCcccCceEeeeccEEEEcHHHHHHHHHCCCE
Confidence 346777777777766554 33344568999999999999988778899999999999999999999999999
Q ss_pred EEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhh
Q 013702 83 VILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKA 161 (438)
Q Consensus 83 PVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~ 161 (438)
||++|++.+++|+.+|+|+|++|++||.+|+|++|+|+||++|+. .++++|++++.+|+++++..+.
T Consensus 164 pv~~~~g~~~~g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~~~~~i~~i~~~e~~~l~~~~~------------ 231 (280)
T cd04237 164 VLLSPLGYSPTGEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDDDGELIRELTAQEAEALLETGA------------ 231 (280)
T ss_pred EEECCceECCCCCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCccccCCHHHHHHHHHcCC------------
Confidence 999999999999999999999999999999999999999999886 4799999999999999987653
Q ss_pred hhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHH
Q 013702 162 VAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR 241 (438)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (438)
+ -+| | |.+||++|..|++
T Consensus 232 -----------------~-----------------------~~g-g---------------------M~~Kv~~a~~a~~ 249 (280)
T cd04237 232 -----------------L-----------------------LTN-D---------------------TARLLQAAIEACR 249 (280)
T ss_pred -----------------C-----------------------CCC-C---------------------HHHHHHHHHHHHH
Confidence 0 022 4 9999999999999
Q ss_pred cCCCeEEeeccccCceeeeehhhcCCCcccc
Q 013702 242 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 272 (438)
Q Consensus 242 ~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i 272 (438)
+||+++||+|++.|++++.|+|+++|.||+|
T Consensus 250 ~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 250 GGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred cCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 9999999999999999999999999999986
|
Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-32 Score=265.98 Aligned_cols=170 Identities=19% Similarity=0.250 Sum_probs=152.5
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~ 95 (438)
.+..|+ .|+++|.+ |+|+++. +++++|++ ..|+|++|+|++||++.|+.+|++|+|||++|++++++|+
T Consensus 99 ~n~~Lv~~L~~~G~~----A~gl~g~-~~~i~a~~-----~~d~g~vG~V~~Vd~~~I~~lL~~g~IPVisplg~~~~G~ 168 (271)
T cd04236 99 DCKTLVEALQANSAA----AHPLFSG-ESVLQAEE-----PEPGASKGPSVSVDTELLQWCLGSGHIPLVCPIGETSSGR 168 (271)
T ss_pred HHHHHHHHHHhCCCC----eeeecCc-cceEEEEE-----cccCCccceEEEECHHHHHHHHhCCCeEEECCceECCCCC
Confidence 445566 78888875 9999998 79999998 2689999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHHHcCCCEEEEEecCccc-cCCCcccccCCH-HHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCC
Q 013702 96 VLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTL-QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 173 (438)
Q Consensus 96 ~~ninaD~~A~~lA~aL~A~~li~ltdv~g~-~~~~~~i~~l~~-~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (438)
.+|+|+|++|++||.+|+|+||||+||++|+ +.++++|++|+. +|++.|+++|+
T Consensus 169 ~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~~g~lI~~l~~~~e~~~li~~g~------------------------ 224 (271)
T cd04236 169 SVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQKHKVLPQVHLPADLPSLSDAEW------------------------ 224 (271)
T ss_pred EEEECHHHHHHHHHHHcCCCEEEEEeCCcceECCCCCCccccCcHHHHHHHHhCCE------------------------
Confidence 9999999999999999999999999999987 467999999995 89999999876
Q ss_pred CCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 013702 174 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 253 (438)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~ 253 (438)
|+|||.+| .+|+++|+.++..|++ |||++
T Consensus 225 -----i~gGm~~k-------------------------------------------i~ki~~~l~~l~~g~s-v~I~~-- 253 (271)
T cd04236 225 -----LSETEQNR-------------------------------------------IQDIATLLNALPSMSS-AVITS-- 253 (271)
T ss_pred -----EcCCeeec-------------------------------------------hHHHHHHHHhcccCCe-EEEeC--
Confidence 55533221 7899999999999999 99998
Q ss_pred cCceeeeehhhcCCCcccc
Q 013702 254 IGGVLLLELFKRDGMGTMV 272 (438)
Q Consensus 254 ~~~~ll~el~~~~g~GT~i 272 (438)
+++++.|+||+.|.||++
T Consensus 254 -~~~ll~elft~~g~GT~~ 271 (271)
T cd04236 254 -AETLLTELFSHKGSGTLF 271 (271)
T ss_pred -hHHHHHHHhccCCCCCcC
Confidence 788999999999999985
|
Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF). |
| >CHL00202 argB acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=262.29 Aligned_cols=175 Identities=26% Similarity=0.462 Sum_probs=155.3
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~ 95 (438)
.+..|+ .|+++|.+ |+++++.|+++++|+++ +++|+|++|+|+++|++.|+.+|++|.|||++|++.+.+|+
T Consensus 104 ln~~lv~~L~~~Gv~----av~l~~~d~~~i~a~~~---~~~d~~~~G~i~~v~~~~i~~ll~~g~iPVi~~~~~~~~g~ 176 (284)
T CHL00202 104 VNKDLVGSINANGGK----AVGLCGKDANLIVARAS---DKKDLGLVGEIQQVDPQLIDMLLEKNYIPVIASVAADHDGQ 176 (284)
T ss_pred HHHHHHHHHHhCCCC----eeeeeeccCCEEEEEeC---CCcccccceeEEecCHHHHHHHHHCCCEEEECCCccCCCCc
Confidence 344445 55566655 99999999999999984 56799999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHHHcCCCEEEEEecCccccC----CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccC
Q 013702 96 VLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFG 171 (438)
Q Consensus 96 ~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~~----~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (438)
.+|+|+|++|++||.+|+|++|+|+||++|+.. ++++|++++.+|+++++..+.
T Consensus 177 ~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~~d~~~~i~~i~~~e~~~l~~~g~---------------------- 234 (284)
T CHL00202 177 TYNINADVVAGEIAAKLNAEKLILLTDTPGILADINDPNSLISTLNIKEARNLASTGI---------------------- 234 (284)
T ss_pred EEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCCCCCCCccccccHHHHHHHHhcCC----------------------
Confidence 999999999999999999999999999998742 478999999999999875431
Q ss_pred CCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeec
Q 013702 172 HSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLD 251 (438)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~ 251 (438)
+ +| | |.+||++|..|+++|++++||+|
T Consensus 235 -------~------------------------tG-G---------------------M~~Kl~aa~~a~~~Gv~~v~I~~ 261 (284)
T CHL00202 235 -------I------------------------SG-G---------------------MIPKVNCCIRALAQGVEAAHIID 261 (284)
T ss_pred -------C------------------------CC-C---------------------HHHHHHHHHHHHHcCCCEEEEeC
Confidence 1 33 4 99999999999999999999999
Q ss_pred cccCceeeeehhhcCCCccccc
Q 013702 252 GTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 252 g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|+.+++++.++|++++.||+|.
T Consensus 262 g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 262 GKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred CCCCChHHHHHhcCCCCceEEe
Confidence 9999998999999999999985
|
|
| >PRK00942 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=248.55 Aligned_cols=175 Identities=37% Similarity=0.591 Sum_probs=157.3
Q ss_pred Ccc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeee
Q 013702 20 PIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLN 98 (438)
Q Consensus 20 ~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~n 98 (438)
.|+ .|+++|.+ |+++++.|+++++++++ .+++|||++|+|+++|.+.|+.+|++|.|||++|++++++|+++|
T Consensus 107 ~i~~~L~~~Gv~----a~~l~~~~~~~~ta~~~--~~~~~~~~~g~i~~i~~~~l~~ll~~g~vpVv~~~~~~~~g~~~~ 180 (283)
T PRK00942 107 ELVSLINKHGGK----AVGLSGKDGGLITAKKL--EEDEDLGFVGEVTPVNPALLEALLEAGYIPVISPIGVGEDGETYN 180 (283)
T ss_pred HHHHHHHhCCCC----ccceeeccCCEEEEEEC--CCCCCCccccceEEECHHHHHHHHHCCCEEEEcCcEECCCCcEEE
Confidence 344 56666765 99999999999999997 677999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHcCCCEEEEEecCccccC-CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCc
Q 013702 99 CNTYEVATACALAIEADKLICIIDGPILDE-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIG 177 (438)
Q Consensus 99 inaD~~A~~lA~aL~A~~li~ltdv~g~~~-~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (438)
+|+|++|+.||.+|+|++|+|+||++|+.. ++++|++++.+|+++++..+.
T Consensus 181 l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~~~~~i~~i~~~e~~~~~~~~~---------------------------- 232 (283)
T PRK00942 181 INADTAAGAIAAALGAEKLILLTDVPGVLDDKGQLISELTASEAEELIEDGV---------------------------- 232 (283)
T ss_pred ECHHHHHHHHHHHcCCCEEEEEECCcccccCCCcccccCCHHHHHHHHHcCC----------------------------
Confidence 999999999999999999999999998854 599999999999999875431
Q ss_pred cccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCce
Q 013702 178 SVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGV 257 (438)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ 257 (438)
+ +| | |.+||++|..+++.|+.++||++++.+++
T Consensus 233 -~------------------------tg-g---------------------m~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ 265 (283)
T PRK00942 233 -I------------------------TG-G---------------------MIPKVEAALDAARGGVRSVHIIDGRVPHA 265 (283)
T ss_pred -C------------------------CC-c---------------------hHHHHHHHHHHHHhCCCEEEEeCCCCCch
Confidence 0 23 4 99999999999999999999999999998
Q ss_pred eeeehhhcCCCcccccCC
Q 013702 258 LLLELFKRDGMGTMVASD 275 (438)
Q Consensus 258 ll~el~~~~g~GT~i~~d 275 (438)
+|.++|++++.||.|.++
T Consensus 266 ll~~~~~~~~~GT~i~~~ 283 (283)
T PRK00942 266 LLLELFTDEGIGTMIVPD 283 (283)
T ss_pred HHHHHhcCCCcceEEecC
Confidence 889999999999999764
|
|
| >cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=243.13 Aligned_cols=170 Identities=35% Similarity=0.562 Sum_probs=154.1
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ |+++++.|++++++++++ .+++||+|+|+|+++|++.|+.+|++|.|||++|++++++|+.+|+|+|
T Consensus 86 ~L~~~Gv~----a~~l~~~~~~~~~~~~~~-~~~~~~~~~g~i~~i~~~~l~~ll~~g~ipVv~~~~~~~~g~~~~~~~D 160 (256)
T cd04238 86 LLNRAGGK----AVGLSGKDGGLIKAEKKE-EKDIDLGFVGEVTEVNPELLETLLEAGYIPVIAPIAVDEDGETYNVNAD 160 (256)
T ss_pred HHHhCCCC----CCCcccccCCEEEEEECC-CCCCCcccccceEEECHHHHHHHHHCCCEEEECCcEECCCCcEEEECHH
Confidence 55666665 999999999999999998 8889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCccccC-CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccc
Q 013702 103 EVATACALAIEADKLICIIDGPILDE-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 181 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g~~~-~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (438)
++|+.+|.+|+|++|+|+|||+|+.. ++++|++++.+|+++++..+.
T Consensus 161 ~~A~~lA~~l~a~~li~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~~~-------------------------------- 208 (256)
T cd04238 161 TAAGAIAAALKAEKLILLTDVPGVLDDPGSLISELTPKEAEELIEDGV-------------------------------- 208 (256)
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccCCCCCccccCCHHHHHHHHHcCC--------------------------------
Confidence 99999999999999999999998864 599999999999988864321
Q ss_pred cCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeee
Q 013702 182 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLE 261 (438)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~e 261 (438)
.+| | |.+||++|..++++|+.++||++++.+++|+.+
T Consensus 209 ---------------------~~g-g---------------------m~~Kl~~a~~~~~~g~~~v~I~~g~~~~~l~~~ 245 (256)
T cd04238 209 ---------------------ISG-G---------------------MIPKVEAALEALEGGVRKVHIIDGRVPHSLLLE 245 (256)
T ss_pred ---------------------CCC-C---------------------hHHHHHHHHHHHHhCCCEEEEeCCCCCcHHHHH
Confidence 023 3 999999999999999999999999999999999
Q ss_pred hhhcCCCcccc
Q 013702 262 LFKRDGMGTMV 272 (438)
Q Consensus 262 l~~~~g~GT~i 272 (438)
++++++.||.|
T Consensus 246 l~~~~~~GT~i 256 (256)
T cd04238 246 LFTDEGIGTMI 256 (256)
T ss_pred HhcCCCCCCCC
Confidence 98878899986
|
Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK). |
| >PLN02512 acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=251.07 Aligned_cols=176 Identities=28% Similarity=0.486 Sum_probs=157.3
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~ 95 (438)
.+..|+ .|+++|.+ |++++|.|++++++++++ +++|++++|+|+++|++.|+.+|+.|.|||++|++++++|+
T Consensus 128 ln~~lv~~L~~~Gv~----av~l~g~d~~~i~a~~~~--~~~~~~~~G~i~~v~~~~i~~lL~~g~IPVi~~~~~d~~g~ 201 (309)
T PLN02512 128 VNKSLVSLINKAGGT----AVGLSGKDGRLLRARPSP--NSADLGFVGEVTRVDPTVLRPLVDDGHIPVIATVAADEDGQ 201 (309)
T ss_pred HHHHHHHHHHHcCCC----eEEeehhhCCEEEEEEcC--cCccccccceeeecCHHHHHHHHhCCCEEEEeCceECCCCC
Confidence 445566 77777876 999999999999999963 45799999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHHHcCCCEEEEEecCcccc----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccC
Q 013702 96 VLNCNTYEVATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFG 171 (438)
Q Consensus 96 ~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (438)
.+|+|+|++|+.||.+|+|++|+|+|||+|+. +++++|++++.+|+++++..+.
T Consensus 202 ~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~~~~~lI~~i~~~e~~~l~~~~~---------------------- 259 (309)
T PLN02512 202 AYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKDDPGSLVKELDIKGVRKLIADGK---------------------- 259 (309)
T ss_pred EeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCCCCcCCCcccCHHHHHHHHhCCC----------------------
Confidence 99999999999999999999999999999874 3589999999999999875432
Q ss_pred CCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeec
Q 013702 172 HSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLD 251 (438)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~ 251 (438)
+ +| | |.+||++|..+++.|++++||++
T Consensus 260 -------v------------------------tG-G---------------------M~~Kl~aa~~a~~~Gv~~v~I~~ 286 (309)
T PLN02512 260 -------I------------------------AG-G---------------------MIPKVECCVRSLAQGVKTAHIID 286 (309)
T ss_pred -------C------------------------CC-c---------------------HHHHHHHHHHHHHcCCCEEEEec
Confidence 1 33 4 99999999999999999999999
Q ss_pred cccCceeeeehhhcCCCccccc
Q 013702 252 GTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 252 g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|+.+++++.++|++++.||.|.
T Consensus 287 g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 287 GRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred CCCCChHHHHHhcCCCCeeEEe
Confidence 9999988889999999999985
|
|
| >cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-29 Score=244.75 Aligned_cols=177 Identities=33% Similarity=0.534 Sum_probs=158.3
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEeccc---ccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS 92 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~---~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~ 92 (438)
.+..|+ .|+++|.+ |+++++.|+++++++++++ ++++||+++|+|+++|++.|+.+|+.|.|||++|++.++
T Consensus 95 ln~~l~~~L~~~Gv~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~i~~~~i~~ll~~g~IPVi~~~~~~~ 170 (279)
T cd04250 95 VNKEIVSLINRAGGK----AVGLSGKDGNLIKAKKKDATVIEEIIDLGFVGEVTEVNPELLETLLEAGYIPVIAPVGVGE 170 (279)
T ss_pred hHHHHHHHHHHcCCC----cceeecCCCCEEEEEECcccccCCCcccCcccceEEEcHHHHHHHHHCCCeEEEcCCccCC
Confidence 334455 67777775 9999999999999999885 578999999999999999999999999999999999999
Q ss_pred CCCeeecChHHHHHHHHHHcCCCEEEEEecCccccC----CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhccccc
Q 013702 93 SGEVLNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDIT 168 (438)
Q Consensus 93 ~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~~----~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 168 (438)
.|+.+|+|+|.+|+.+|.+|+|++|+|+|||+|+.. ++++|++++.+|++++...+.
T Consensus 171 ~g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~~~~------------------- 231 (279)
T cd04250 171 DGETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPNDPGSLISEISLKEAEELIADGI------------------- 231 (279)
T ss_pred CCcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCCCCccccccCCHHHHHHHHHcCC-------------------
Confidence 999999999999999999999999999999998842 389999999999988865421
Q ss_pred ccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEE
Q 013702 169 CFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVH 248 (438)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 248 (438)
.+| | |.+||++|..|+++|++++|
T Consensus 232 ----------------------------------~tG-g---------------------m~~Kl~~a~~a~~~g~~~v~ 255 (279)
T cd04250 232 ----------------------------------ISG-G---------------------MIPKVEACIEALEGGVKAAH 255 (279)
T ss_pred ----------------------------------CCC-c---------------------hHHHHHHHHHHHHhCCCEEE
Confidence 033 4 99999999999999999999
Q ss_pred eeccccCceeeeehhhcCCCcccc
Q 013702 249 LLDGTIGGVLLLELFKRDGMGTMV 272 (438)
Q Consensus 249 i~~g~~~~~ll~el~~~~g~GT~i 272 (438)
|+|++.|++++.++|++++.||.|
T Consensus 256 I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 256 IIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred EeCCCCCchHHHHHhcCCCCccCC
Confidence 999999999999999999999986
|
In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A |
| >cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP) | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=237.32 Aligned_cols=169 Identities=24% Similarity=0.335 Sum_probs=144.6
Q ss_pred CCCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCC
Q 013702 16 SPGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSG 94 (438)
Q Consensus 16 s~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g 94 (438)
..+..|+ .|+++|.+ |+++++ ++++++| .++.||||+|+|+++|++.|+.+|+.|+|||++|++++++|
T Consensus 75 ~vn~~iv~~l~~~g~~----a~~l~~---~~~~a~~---~~~~d~g~~G~v~~i~~~~i~~~L~~g~IPVi~p~~~~~~g 144 (248)
T cd04252 75 EENLKLVEALERNGAR----ARPITS---GVFEAEY---LDKDKYGLVGKITGVNKAPIEAAIRAGYLPILTSLAETPSG 144 (248)
T ss_pred HHHHHHHHHHHhCCCC----cccccC---ceEEEEE---CcCccCCccCceeeECHHHHHHHHHCCCeEEECCceECCCC
Confidence 3556666 77777775 999884 4778888 46789999999999999999999999999999999999999
Q ss_pred CeeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCH-HHHHHHHHhhhhhhhHHHhHhhhhhcccccccCC
Q 013702 95 EVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTL-QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGH 172 (438)
Q Consensus 95 ~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~-~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (438)
+.+|+|+|++|+++|.+|+|+||+|+||++|+. .++++|++++. +++++++..+.
T Consensus 145 ~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~~g~~i~~i~~~~~~~~l~~~~~----------------------- 201 (248)
T cd04252 145 QLLNVNADVAAGELARVLEPLKIVFLNETGGLLDGTGKKISAINLDEEYDDLMKQPW----------------------- 201 (248)
T ss_pred CEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCCCCCcccccCHHHHHHHHHHcCC-----------------------
Confidence 999999999999999999999999999999885 46999999997 47778875432
Q ss_pred CCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHc--CCCeEEee
Q 013702 173 SDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR--GVQRVHLL 250 (438)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gv~~~~i~ 250 (438)
+ +| | |.+||++|..+.+. ++..+||+
T Consensus 202 ------v------------------------tg-G---------------------M~~Kl~~~~~~~~~~~~~~~v~i~ 229 (248)
T cd04252 202 ------V------------------------KY-G---------------------TKLKIKEIKELLDTLPRSSSVSIT 229 (248)
T ss_pred ------c------------------------CC-c---------------------hHHHHHHHHHHHHhCCCceEEEEE
Confidence 1 33 4 89999988888776 56678888
Q ss_pred ccccCceeeeehhhcCCCcccc
Q 013702 251 DGTIGGVLLLELFKRDGMGTMV 272 (438)
Q Consensus 251 ~g~~~~~ll~el~~~~g~GT~i 272 (438)
+ +++++.|||+++|.||+|
T Consensus 230 ~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 230 S---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred C---CchHHHHHhcCCCCCccC
Confidence 7 688999999999999986
|
The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th |
| >cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC) | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=237.52 Aligned_cols=172 Identities=32% Similarity=0.422 Sum_probs=148.9
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecc--------cccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKG--------VVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN 87 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~--------~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~ 87 (438)
.+..|+ .|+++|.+ |+++++.|++++++++.. .....|+||+|+|+++|++.|+.+|++|+|||++|
T Consensus 77 ln~~iv~~L~~~Gi~----a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~G~v~~v~~~~i~~ll~~g~vpVi~~ 152 (257)
T cd04251 77 INKKIVARLHSLGVK----AVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALLDAGYLPVVSP 152 (257)
T ss_pred HHHHHHHHHHhCCCC----ceecccccCCEEEEEEeecccccccCcccccCCcceEEEEEEcHHHHHHHHhCCCeEEEeC
Confidence 445566 67777775 999999999999999862 22336899999999999999999999999999999
Q ss_pred cccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCccccCCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccc
Q 013702 88 LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 167 (438)
Q Consensus 88 i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~ 167 (438)
++++.+|+.+|+|+|.+|+++|.+|+|++|+|+||++|+..++++|++++.+|+++++.. .
T Consensus 153 ~~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~~~~i~~i~~~e~~~l~~~-~------------------ 213 (257)
T cd04251 153 VAYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLDGRVIERITVSDAESLLEK-A------------------ 213 (257)
T ss_pred cEECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeCCcccCccCHHHHHHHHhh-C------------------
Confidence 999999999999999999999999999999999999999878999999999999888622 1
Q ss_pred cccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeE
Q 013702 168 TCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 247 (438)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 247 (438)
+| | |.+||++|..|+++|++++
T Consensus 214 ------------------------------------~g-g---------------------m~~Kl~aa~~a~~~gv~~v 235 (257)
T cd04251 214 ------------------------------------GG-G---------------------MKRKLLAAAEAVEGGVREV 235 (257)
T ss_pred ------------------------------------CC-c---------------------hHHHHHHHHHHHHcCCCEE
Confidence 33 4 9999999999999999999
Q ss_pred EeeccccCceeeeehhhcCCCcccc
Q 013702 248 HLLDGTIGGVLLLELFKRDGMGTMV 272 (438)
Q Consensus 248 ~i~~g~~~~~ll~el~~~~g~GT~i 272 (438)
||++|+.|+.+. .++. |.||.|
T Consensus 236 ~i~~g~~~~~l~-~~l~--g~gT~i 257 (257)
T cd04251 236 VIGDARADSPIS-SALN--GGGTVI 257 (257)
T ss_pred EEecCCCccHHH-HHHc--CCCcCC
Confidence 999999998654 4332 468875
|
This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK). |
| >cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=231.84 Aligned_cols=171 Identities=25% Similarity=0.346 Sum_probs=151.5
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~ 95 (438)
.+..++ .+.++|.+ |+++++.|+++++++|++ .|+|++|+|+++|.+.|+.+|+.|+|||++|++++++|+
T Consensus 80 ~n~~lv~~l~~~Gv~----a~~l~~~~~~~~~~~~~~----~~~~~~G~v~~i~~~~l~~ll~~g~ipVi~~~g~~~~g~ 151 (252)
T cd04249 80 ANKQLMAQAIKAGLK----PVGLSLADGGMTAVTQLD----PELGAVGKATANDPSLLNDLLKAGFLPIISSIGADDQGQ 151 (252)
T ss_pred ccHHHHHHHHhCCCC----ceeeeccCCCEEEEEEcC----CCCCcccceEEEcHHHHHHHHHCCCEEEECCCEECCCCC
Confidence 444556 66667765 999999999999999975 689999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCC
Q 013702 96 VLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 174 (438)
Q Consensus 96 ~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (438)
++|+|+|.+|+++|.+|+|+ ++|+|||+|+. .++++|++++.+|+++++..+.
T Consensus 152 ~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~~~~i~~i~~~e~~~~~~~g~------------------------- 205 (252)
T cd04249 152 LMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDADKQLISELNAKQAAELIEQGV------------------------- 205 (252)
T ss_pred EeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCCCcCccccCHHHHHHHHhcCC-------------------------
Confidence 99999999999999999999 78999999885 5789999999999999875432
Q ss_pred CCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 013702 175 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 254 (438)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~ 254 (438)
+ +| | |.+|+.+|..+++.|+.++||++++.
T Consensus 206 ----~------------------------~g-G---------------------m~~kl~~a~~~~~~~~~~v~I~~g~~ 235 (252)
T cd04249 206 ----I------------------------TD-G---------------------MIVKVNAALDAAQSLRRGIDIASWQY 235 (252)
T ss_pred ----C------------------------cC-C---------------------cHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 1 33 4 99999999999999999999999998
Q ss_pred CceeeeehhhcCCCcccc
Q 013702 255 GGVLLLELFKRDGMGTMV 272 (438)
Q Consensus 255 ~~~ll~el~~~~g~GT~i 272 (438)
++. +.++|++++.||+|
T Consensus 236 ~~~-l~~~l~g~~~GT~I 252 (252)
T cd04249 236 PEQ-LTALLAGEPVGTKI 252 (252)
T ss_pred ccH-HHHHHcCCCCCcCC
Confidence 885 67899999999986
|
There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=233.43 Aligned_cols=175 Identities=29% Similarity=0.412 Sum_probs=151.4
Q ss_pred CCCCCcc-cccccCCCCCcceeeeeeecccEEEEEecc----cccC----CCcceeeeEeeeCHHHHHHHhcCCceEEEc
Q 013702 16 SPGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKG----VVDG----VDYGATGEVKKVDVTRMRERLDGGCLVILS 86 (438)
Q Consensus 16 s~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~----~~~~----~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~ 86 (438)
..+..|+ .|+++|.+ |+++++.|.+++++++.. +.+| .|+||+|+|+++|++.|+.+|++|+|||++
T Consensus 80 ~ln~~lv~~L~~~Gv~----a~~l~~~~~~l~~~~~~~~~~~~~~g~~~~~d~g~~g~v~~v~~~~i~~ll~~g~iPVi~ 155 (268)
T PRK14058 80 LINKQLVERLQSLGVN----AVGLSGLDGGLLEGKRKKAVRVVEEGKKKIIRGDYTGKIEEVNTDLLKLLLKAGYLPVVA 155 (268)
T ss_pred HHHHHHHHHHHhCCCC----ccccCcccCCEEEEEEecccccccCCcceeccCCceeEEEEECHHHHHHHHHCCCEEEEe
Confidence 3555666 77888876 999999999999998753 3344 699999999999999999999999999999
Q ss_pred CcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhh
Q 013702 87 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAV 162 (438)
Q Consensus 87 ~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~ 162 (438)
|++++.+|+.+|+|+|.+|+.+|.+|+|++|+|+|||+|+. +++++|++++.+|++++....
T Consensus 156 ~~~~~~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~~~~~i~~i~~~e~~~l~~~~-------------- 221 (268)
T PRK14058 156 PPALSEEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPDEGSLIERITPEEAEELSKAA-------------- 221 (268)
T ss_pred CceECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCCCCcCccCcCHHHHHHHhhcc--------------
Confidence 99988889999999999999999999999999999999884 248899999999888875321
Q ss_pred hcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHc
Q 013702 163 AEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 242 (438)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (438)
+| | |.+||++|..|+++
T Consensus 222 -----------------------------------------tG-g---------------------M~~Kl~aa~~a~~~ 238 (268)
T PRK14058 222 -----------------------------------------GG-G---------------------MKKKVLMAAEAVEG 238 (268)
T ss_pred -----------------------------------------CC-c---------------------cHHHHHHHHHHHHc
Confidence 33 4 99999999999999
Q ss_pred CCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 243 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 243 gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
|++++||+|++.++.++.++ +|.||.|..
T Consensus 239 Gv~~v~I~~g~~~~~l~~~l---~G~GT~I~~ 267 (268)
T PRK14058 239 GVGRVIIADANVDDPISAAL---AGEGTVIVN 267 (268)
T ss_pred CCCEEEEEcCCCcchHHHHh---CCCceEEec
Confidence 99999999999999887766 456999864
|
|
| >PRK12352 putative carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.6e-28 Score=237.51 Aligned_cols=189 Identities=17% Similarity=0.233 Sum_probs=152.8
Q ss_pred ccccchhhhhHhhhCCCCCcccccccCCCC---CcceeeeeeecccEE-EEEecccc-----------cCCCcceeee--
Q 013702 2 EAAGGIRMMIEAKLSPGPPICNIRRHGDSS---RWHEVGVSVASGNFL-AAKRKGVV-----------DGVDYGATGE-- 64 (438)
Q Consensus 2 ~~~g~~~~~~~a~ls~~~~l~~l~~~g~~~---~~~avgl~g~~g~~i-~a~~~~~~-----------~~~d~g~vG~-- 64 (438)
++.|.++.+|++.|+..+. ++|... -+..+++++.|++|+ .++|.|++ +++|++|+|+
T Consensus 84 ~~~g~i~~~i~~~L~~~l~-----~~g~~~~~~vvt~v~vs~~D~~f~~~~kpiG~~y~~~~a~~~~~~~~~~~~~~d~g 158 (316)
T PRK12352 84 DTQGGIGYLIQQALNNRLA-----RHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSESQRDELQKANPDWRFVEDAG 158 (316)
T ss_pred HHHHHHHHHHHHHHHHHHH-----hcCCCCeeEEEEEEEECCCCccccCCcccccCcccHHHHHHHhhhcCCceEeecCC
Confidence 3568899999999987654 444210 011489999999999 66777765 5679999777
Q ss_pred ------------EeeeCHHHHHHHhcCCceEEEc-----CcccCCCCCe----eecChHHHHHHHHHHcCCCEEEEEecC
Q 013702 65 ------------VKKVDVTRMRERLDGGCLVILS-----NLGYSSSGEV----LNCNTYEVATACALAIEADKLICIIDG 123 (438)
Q Consensus 65 ------------v~~v~~~~i~~ll~~g~IPVi~-----~i~~~~~g~~----~ninaD~~A~~lA~aL~A~~li~ltdv 123 (438)
|+.||++.|+.||++|+|||++ |++.+..|+. +|||+|.+|+++|.+|+||+|+||||+
T Consensus 159 ~G~rrvv~sp~pv~~V~~~~I~~ll~~g~iVi~~ggggiPv~~~~~g~~~n~~~nInaD~aAa~iA~aL~AdkLI~LTDV 238 (316)
T PRK12352 159 RGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTGV 238 (316)
T ss_pred CCeEEecCCCCCceEEcHHHHHHHHHCCCEEEecCCCCCCEEeCCCCCccCceeeecHHHHHHHHHHHhCCCEEEEEeCc
Confidence 9999999999999999997777 8887766664 559999999999999999999999999
Q ss_pred cccc-----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccC
Q 013702 124 PILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNN 198 (438)
Q Consensus 124 ~g~~-----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (438)
+|+. +++++|++++.+|+++++++|. +.
T Consensus 239 ~GV~~d~~~~~~~li~~lt~~e~~~li~~g~-----------------------------i~------------------ 271 (316)
T PRK12352 239 EKVCIHFGKPQQQALDRVDIATMTRYMQEGH-----------------------------FP------------------ 271 (316)
T ss_pred hhhccCCCCCCcccccccCHHHHHHHHhcCC-----------------------------cC------------------
Confidence 9874 3578999999999999987653 10
Q ss_pred CCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 199 GVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 199 ~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
.| | |.+||++|+.||+.|++|+||++ ++. +.++++++ .||+|.+
T Consensus 272 -----~G-g---------------------M~pKl~aA~~al~~Gv~~v~I~~---~~~-i~~al~g~-~GT~I~~ 315 (316)
T PRK12352 272 -----PG-S---------------------MLPKIIASLTFLEQGGKEVIITT---PEC-LPAALRGE-TGTHIIK 315 (316)
T ss_pred -----CC-C---------------------CHHHHHHHHHHHHhCCCeEEEcc---hHH-HHHHHcCC-CCeEEEe
Confidence 12 3 99999999999999999999997 444 45777776 7899864
|
|
| >KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-28 Score=245.97 Aligned_cols=334 Identities=42% Similarity=0.540 Sum_probs=266.5
Q ss_pred CCCcc-cccccCCCCCcceeeeeee--cccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCC
Q 013702 18 GPPIC-NIRRHGDSSRWHEVGVSVA--SGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSG 94 (438)
Q Consensus 18 ~~~l~-~l~~~g~~~~~~avgl~g~--~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g 94 (438)
++.++ .|+++|.. +++.++. .+++++|++.+++|+.+||++|+|.+||.+.|+.+++.|.+|+++.++.+.+|
T Consensus 175 n~~lv~nL~~~g~~----ar~~s~g~~v~~~f~a~~~~v~d~~~y~~~gei~~vd~d~i~~l~~~G~mp~L~sla~TaSG 250 (520)
T KOG2436|consen 175 NLNLVINLSQLGTR----ARPSSSGVRVGNFFPADRNGVLDGEDYGLVGEIKKVDVDRIRHLLDAGSMPLLRSLAATASG 250 (520)
T ss_pred hhHHHHHHHHhhce----eccccccccccceeecccccccccceeeeecccceechhhhhhhhhCCCchhehhhcccCcc
Confidence 34466 89999975 6666655 37799999999999999999999999999999999999999999999999999
Q ss_pred CeeecChHHHHHHHHHHcCCCEEEEEec-CccccCCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCC
Q 013702 95 EVLNCNTYEVATACALAIEADKLICIID-GPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 173 (438)
Q Consensus 95 ~~~ninaD~~A~~lA~aL~A~~li~ltd-v~g~~~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (438)
+++|||+|++|.++|.+|+|+|+++++| .++++++|+.++.++.++...++...+.|.++++..++++.+...+-++-.
T Consensus 251 qvlnvNa~~~a~elA~~L~~~kli~l~d~g~~l~e~ge~~S~l~l~~e~~~l~k~~qq~~~a~~~v~aV~~~~~~~~p~~ 330 (520)
T KOG2436|consen 251 QVLNVNADEVAGELALALGPDKLILLMDKGRILKENGEDISSLILQEEDAGLRKPSQQKNIAANNVKAVKDGIDSSLPRP 330 (520)
T ss_pred ceEEeeHHHHhhHHHhccCcceeEEecccccccccCcccccccccchhHhhhhhhhhhcccccccchhhhhheeeccCcC
Confidence 9999999999999999999999999999 557889999999999998888888878888899999999988777755522
Q ss_pred CC-Cccccc----cCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEE
Q 013702 174 DS-IGSVYS----SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVH 248 (438)
Q Consensus 174 ~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 248 (438)
-+ ++.+.. .-..-+..+ +..|+.+|.+++.++++|+..++++.+.-+++.|+.+.+.++-+|-.-|..+++++|
T Consensus 331 ~s~~i~~~t~~n~~~~~~te~G-~~t~~~~gv~~~k~~sl~~~~~~~al~~~~~~~rln~~lse~i~a~~~~~~~i~~~~ 409 (520)
T KOG2436|consen 331 SSYNIAITTQQNLIKELFTEKG-AGTLISGGVGINKGNSLISQSFKRALDLEEYIDRLNGSLSELIAAGDYCGGAIKTYE 409 (520)
T ss_pred CCCCcceeecccccceeeccCC-CCccccCceeeecCcccccchhhhhcchHHHHHHhhchHHHHHHHHHHhccceEEEE
Confidence 21 221111 111111112 777899999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCceeeeehhhcCCCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhcCcEEEEEECCE
Q 013702 249 LLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALDSFYVVEREGQ 327 (438)
Q Consensus 249 i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~~~~~V~~~dg~ 327 (438)
..|+....-++++.|...+.+|.. .+-+-.++.+..+|+|+|....++......+ ..++.+.+. ....+++.+.+++
T Consensus 410 ~~D~~~e~V~~ldkf~~~~~~~~~-~~V~d~ifn~~~~dfp~i~wr~r~~~~~~~w~f~rs~g~L~-~~~~~lfwyg~~~ 487 (520)
T KOG2436|consen 410 LSDGTNEGVLYLDKFAVSGMGTGS-SDVSDGIFNVMVEDFPEILWRSRPLNEVNKWYFRRSEGSLR-ALDFKLFWYGEGQ 487 (520)
T ss_pred ccCCCcccceeeeecccCCccccc-chhhHHHHHHHHHhhhhheeecccccccceEEEeccHHHHh-ccCcEEEEecCcH
Confidence 999988887889999888888887 3444445566667777666555554433333 334444443 4455666677888
Q ss_pred EEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHH
Q 013702 328 IIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 363 (438)
Q Consensus 328 iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~L 363 (438)
+..|+.+.++. ++..+.|.++.|+++-+.++
T Consensus 488 i~~~a~~~~~~-----~v~~~~~~~d~~~s~~n~k~ 518 (520)
T KOG2436|consen 488 IIKCAALFQFF-----EVAAMSVASDIRPSWQNDKL 518 (520)
T ss_pred HHHHHHhhhhh-----HHHHhhhccccCccccCCCC
Confidence 99998887654 56677888888887766554
|
|
| >PRK04531 acetylglutamate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=227.53 Aligned_cols=229 Identities=21% Similarity=0.269 Sum_probs=178.9
Q ss_pred HHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCH-HHHHHHHHhhhh
Q 013702 73 MRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTL-QEADSLIRQRVK 150 (438)
Q Consensus 73 i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~-~e~~~l~~~g~~ 150 (438)
|+.+|+.|.|||++|++.+++|+.+|||+|++|++||.+|+|+||||+||++|+. .+|++|++|+. ++++.+++.+.
T Consensus 122 I~~~L~~g~IPVlsplg~~~~G~~~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~~g~~i~~i~~~~e~~~l~~~~~- 200 (398)
T PRK04531 122 VESSLRAGSIPVIASLGETPSGQILNINADVAANELVSALQPYKIIFLTGTGGLLDADGKLISSINLSTEYDHLMQQPW- 200 (398)
T ss_pred HHHHHHCCCEEEEeCcEECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCCCCCCcccCCHHHHHHHHHhcCC-
Confidence 8899999999999999999999999999999999999999999999999999885 57999999997 57787765432
Q ss_pred hhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccch
Q 013702 151 QSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYL 230 (438)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 230 (438)
+ +| | |.
T Consensus 201 ----------------------------v------------------------tg-G---------------------M~ 206 (398)
T PRK04531 201 ----------------------------I------------------------NG-G---------------------MK 206 (398)
T ss_pred ----------------------------C------------------------Cc-c---------------------HH
Confidence 1 23 4 99
Q ss_pred HHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCCcee-EEEECCccCHHHHHHHHHHHHHcCcCCcCCH
Q 013702 231 SELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTD 309 (438)
Q Consensus 231 ~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~-~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~ 309 (438)
+||++|..|++ +++++|+++++.+++|+.||||++|.||+|.+...+ ....+..=|.+.+.+++...+.... .
T Consensus 207 ~KL~~a~~al~-~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g~~i~~~~~~~~~d~~~l~~ll~~sf~r~~-----~ 280 (398)
T PRK04531 207 LKLEQIKELLD-RLPLESSVSITSPSDLAKELFTHKGSGTLVRRGERILRATDWDELDLERLNLLIESSFGRTL-----K 280 (398)
T ss_pred HHHHHHHHHHh-CCCcEEEEEecCCCHHHHHHccCCCCCeEEecCCceeeeCChhhcCHHHHHHHHhhhcccch-----H
Confidence 99999999995 577899999999999999999999999999986543 3334455588888888754443321 1
Q ss_pred HHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHH
Q 013702 310 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRT 386 (438)
Q Consensus 310 e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a 386 (438)
+++... ...+-++.++..=|++.+.+ ....+++..|+|.+..|+.|++..+++.+.+.. +.+++.+ ++.
T Consensus 281 ~~y~~~-~~~~~~y~~~~y~~~Aiv~~--~~~~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~-----~~L~Wrsr~~n~~ 352 (398)
T PRK04531 281 PDYFDT-TQLLRAYVSENYRAAAILTE--TGGGPYLDKFAVLDDARGEGLGRAVWNVMREET-----PQLFWRSRHNNTI 352 (398)
T ss_pred HHHhcc-CCceEEEEeCCCcEEEEEec--CCCceEeEEEEEccchhhcChHHHHHHHHHhhC-----CceEEEcCCCCCc
Confidence 233332 34444555666666666652 356899999999999999999999999888665 3455554 344
Q ss_pred HHHH
Q 013702 387 ADWF 390 (438)
Q Consensus 387 ~~fY 390 (438)
.+||
T Consensus 353 ~~Wy 356 (398)
T PRK04531 353 NKFY 356 (398)
T ss_pred ccee
Confidence 4555
|
|
| >TIGR00761 argB acetylglutamate kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-25 Score=211.41 Aligned_cols=123 Identities=30% Similarity=0.471 Sum_probs=109.6
Q ss_pred CCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCee
Q 013702 19 PPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVL 97 (438)
Q Consensus 19 ~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ 97 (438)
..++ .|+++|.+ |+++++.|+++++++++ ++.|++++|+++++|++.|+.+|++|+|||++|++++.+|+++
T Consensus 80 ~~i~~~L~~~G~~----a~~l~~~~~~~it~~~~---~~~~~~~~g~i~~i~~~~i~~~l~~g~IPVi~~~~~~~~g~~~ 152 (231)
T TIGR00761 80 KELVALLNKHGIN----AIGLTGGDGQLFTARSL---DKEDLGYVGEIKKVNKALLEALLKAGYIPVISSLALTAEGQAL 152 (231)
T ss_pred HHHHHHHHhCCCC----cccccCCCCCEEEEEEC---CCccCCcccceEEEcHHHHHHHHHCCCeEEECCCccCCCCcEE
Confidence 3444 66667765 99999999999999985 4578999999999999999999999999999999999999999
Q ss_pred ecChHHHHHHHHHHcCCCEEEEEecCcccc-CC-CcccccCCHHHHHHHHHhh
Q 013702 98 NCNTYEVATACALAIEADKLICIIDGPILD-ES-GHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 98 ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~-~~~i~~l~~~e~~~l~~~g 148 (438)
|+|+|.+|+.||.+|+|++|+|+||++|+. .+ +++|++++.+|+++++..+
T Consensus 153 ~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~~~~i~~i~~~e~~~l~~~~ 205 (231)
T TIGR00761 153 NVNADTAAGALAAALGAEKLVLLTDVPGILNGDGQSLISEIPLEEIEQLIEQG 205 (231)
T ss_pred EeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCCCeeccccCHHHHHHHHHcC
Confidence 999999999999999999999999999874 33 4599999999999987543
|
This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model. |
| >COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=183.96 Aligned_cols=147 Identities=39% Similarity=0.738 Sum_probs=139.5
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCC
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 357 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgq 357 (438)
++||.++.+|++.|.+|+.++...+.+.+++++.++..+..|++++++|+++||++++++.+.+.+++.+++|+|+||++
T Consensus 1 ~~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~dF~i~E~~g~viGC~aL~~~~~~~~gE~~~laV~pd~r~~ 80 (153)
T COG1246 1 EQIRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIERDGKVIGCAALHPVLEEDLGELRSLAVHPDYRGS 80 (153)
T ss_pred CceeeccccchHHHHHHHHHHhhccccchhhHHHHHHHHhhheeeeeCCcEEEEEeecccCccCeeeEEEEEECHHhcCC
Confidence 36999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEeceeccchHhhhhhcCC-CCceEEEEcc
Q 013702 358 GQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMKKL 424 (438)
Q Consensus 358 GiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~-r~s~~~~k~l 424 (438)
|+|..|+++++..|++.|++.+|+.|+.+..||+++||+.+..+.+|..++..|+++ +.++..+..+
T Consensus 81 G~G~~Ll~~~~~~Ar~~gi~~lf~LTt~~~~~F~~~GF~~vd~~~LP~~~~~~~~~~~~~~~~~~~~~ 148 (153)
T COG1246 81 GRGERLLERLLADARELGIKELFVLTTRSPEFFAERGFTRVDKDELPEEVWSSYNFCERRSKCLAFDL 148 (153)
T ss_pred CcHHHHHHHHHHHHHHcCCceeeeeecccHHHHHHcCCeECccccCCHHHHHHHHhhhhhhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 7776655443
|
|
| >cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.4e-22 Score=190.39 Aligned_cols=164 Identities=17% Similarity=0.239 Sum_probs=133.3
Q ss_pred CCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCe
Q 013702 19 PPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEV 96 (438)
Q Consensus 19 ~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~ 96 (438)
..++ .|+++|.+ ++++++.+.. .++ +|++..++.+.|+.+|+.|.|||+++. +.+++|+.
T Consensus 83 ~~~~~~l~~~g~~----a~~l~~~~~~--~~~------------~g~~~~~~~~~l~~ll~~g~iPVi~~~~~~~~~~~~ 144 (252)
T cd04241 83 SIVVDALLEAGVP----AVSVPPSSFF--VTE------------NGRIVSFDLEVIKELLDRGFVPVLHGDVVLDEGGGI 144 (252)
T ss_pred HHHHHHHHHCCCC----eEEEChHHeE--Eec------------CCeeeeecHHHHHHHHhCCCEEEEcCCeEecCCCCe
Confidence 3445 66777765 9999998842 221 689999999999999999999999874 67888899
Q ss_pred eecChHHHHHHHHHHcCCCEEEEEecCccccC----CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCC
Q 013702 97 LNCNTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGH 172 (438)
Q Consensus 97 ~ninaD~~A~~lA~aL~A~~li~ltdv~g~~~----~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (438)
+|+|+|++|+.+|.+|+|++|+|+|||+|+.. ++++|++++.+++++++....+
T Consensus 145 ~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P~~~~~i~~i~~~~~~~~~~~~~~---------------------- 202 (252)
T cd04241 145 TILSGDDIVVELAKALKPERVIFLTDVDGVYDKPPPDAKLIPEIDVGSLEDILAALGS---------------------- 202 (252)
T ss_pred EEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCeEcceeCccchHHHHHhcCc----------------------
Confidence 99999999999999999999999999998843 5999999999888888653100
Q ss_pred CCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecc
Q 013702 173 SDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDG 252 (438)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g 252 (438)
++...+| | |.+||++|..|+++|++ +||+++
T Consensus 203 --------------------------~~~~~tG-G---------------------m~~Kl~aa~~a~~~Gv~-v~I~~g 233 (252)
T cd04241 203 --------------------------AGTDVTG-G---------------------MAGKIEELLELARRGIE-VYIFNG 233 (252)
T ss_pred --------------------------CCccccC-C---------------------HHHHHHHHHHHHhcCCe-EEEEeC
Confidence 0000133 3 99999999999999997 999999
Q ss_pred ccCceeeeehhhcCCCcccc
Q 013702 253 TIGGVLLLELFKRDGMGTMV 272 (438)
Q Consensus 253 ~~~~~ll~el~~~~g~GT~i 272 (438)
+.++. +.+++.++..||.|
T Consensus 234 ~~~~~-l~~~l~g~~~GT~i 252 (252)
T cd04241 234 DKPEN-LYRALLGNFIGTRI 252 (252)
T ss_pred CCHHH-HHHHHcCCCCceEC
Confidence 98876 56777788889975
|
Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK) | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-20 Score=177.33 Aligned_cols=155 Identities=28% Similarity=0.417 Sum_probs=135.5
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCC---CCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSS---SGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~---~g~~~ni 99 (438)
.|+++|.+ ++.+++.+..+... +++++|.+..++.+.|+.+|+.|.|||+++++... .++..|+
T Consensus 84 ~l~~~gi~----a~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~l~~~l~~~~ipVv~g~~~~~~~~~~~~~~~ 150 (248)
T cd02115 84 ALEQHGIK----AVPLDLTQAGFASP---------NQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEKETGTLGRG 150 (248)
T ss_pred HHHhCCCC----eEEEchHHcCeEeC---------CCCCcccceeeCHHHHHHHHhCCcEEEecCeEeccCCceeeecCC
Confidence 67777775 99999888776653 56889999999999999999999999999987665 7888999
Q ss_pred ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCC
Q 013702 100 NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGH 172 (438)
Q Consensus 100 naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (438)
++|.+|+.+|.+|+|++|+|+|||+|+. +++++|++|+.+|++++...|
T Consensus 151 ~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~g------------------------ 206 (248)
T cd02115 151 GSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYAG------------------------ 206 (248)
T ss_pred CHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHHHHHcC------------------------
Confidence 9999999999999999999999999873 238999999999998886432
Q ss_pred CCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecc
Q 013702 173 SDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDG 252 (438)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g 252 (438)
+ |..|++++..++++|+ +++|+++
T Consensus 207 ----------------------------------~---------------------~~~k~~a~~~~~~~~~-~v~I~~~ 230 (248)
T cd02115 207 ----------------------------------A---------------------MVLKPKAADPAARAGI-PVRIANT 230 (248)
T ss_pred ----------------------------------C---------------------CccCHHHHHHHHHcCC-cEEEEeC
Confidence 2 7889999999999995 6999999
Q ss_pred ccCceeeeehhhcCCCcccc
Q 013702 253 TIGGVLLLELFKRDGMGTMV 272 (438)
Q Consensus 253 ~~~~~ll~el~~~~g~GT~i 272 (438)
..++.+ ++|++++.||.|
T Consensus 231 ~~~~~l--~~~~~~~~GT~I 248 (248)
T cd02115 231 ENPGAL--ALFTPDGGGTLI 248 (248)
T ss_pred CCcccc--cccCCCCCCCCC
Confidence 999876 999999999986
|
The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition. |
| >PRK12353 putative amino acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-18 Score=172.04 Aligned_cols=186 Identities=20% Similarity=0.242 Sum_probs=129.0
Q ss_pred ccchhhhhHhhhCCCCCcccccccCCCCCc-ceeeeeeeccc---E-EEEEecccc------------cCCCcce-eee-
Q 013702 4 AGGIRMMIEAKLSPGPPICNIRRHGDSSRW-HEVGVSVASGN---F-LAAKRKGVV------------DGVDYGA-TGE- 64 (438)
Q Consensus 4 ~g~~~~~~~a~ls~~~~l~~l~~~g~~~~~-~avgl~g~~g~---~-i~a~~~~~~------------~~~d~g~-vG~- 64 (438)
.|.+++.+++.++..+. .+|....+ ..+.---.+++ + ..++|.|++ +|.||.+ .|+
T Consensus 85 qg~l~~~l~~~~~~~l~-----~~~~~~~~~~~v~q~ll~~~d~~f~~~~~p~g~~~~~~~~~~~~~~~g~~~~~~~~~~ 159 (314)
T PRK12353 85 QGYIGYHLQNALRNELL-----KRGIDKPVATVVTQVVVDANDPAFKNPTKPIGPFYTEEEAEKLAKEKGYTFKEDAGRG 159 (314)
T ss_pred hHHHHHHHHHHHHHHHH-----hcCCCcccceEEEEEEEcCCcccccCCCccccccccHHHHHHhhhhcCceeeecCCce
Confidence 56777888877776544 33322111 11111111444 4 556666655 5667766 454
Q ss_pred Eee----------eCHHHHHHHhcCCceEEEcCccc----CCCCCee----ecChHHHHHHHHHHcCCCEEEEEecCccc
Q 013702 65 VKK----------VDVTRMRERLDGGCLVILSNLGY----SSSGEVL----NCNTYEVATACALAIEADKLICIIDGPIL 126 (438)
Q Consensus 65 v~~----------v~~~~i~~ll~~g~IPVi~~i~~----~~~g~~~----ninaD~~A~~lA~aL~A~~li~ltdv~g~ 126 (438)
.++ ||.+.|+.||+.|+|||++|.+. ..++.++ |+|+|++|+.+|.+|+||+|+|+|||+|+
T Consensus 160 ~r~~v~sp~p~~~v~~~~i~~lL~~g~IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~lTdvdGV 239 (314)
T PRK12353 160 YRRVVPSPKPVDIVEIEAIKTLVDAGQVVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIILTAVDKV 239 (314)
T ss_pred eEeccCCCCccccccHHHHHHHHHCCCEEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEEeCCccc
Confidence 444 79999999999999999996532 2233333 59999999999999999999999999987
Q ss_pred c-----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCc
Q 013702 127 D-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVG 201 (438)
Q Consensus 127 ~-----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (438)
. +++++|++++.+++++++..+.
T Consensus 240 y~~~~~~~a~~i~~i~~~e~~~~~~~~~---------------------------------------------------- 267 (314)
T PRK12353 240 YINFGKPNQKKLDEVTVSEAEKYIEEGQ---------------------------------------------------- 267 (314)
T ss_pred cCCCCCCCCeECcCcCHHHHHHHHhcCC----------------------------------------------------
Confidence 4 3579999999988888865432
Q ss_pred cCCCCCCccccccccccccchhhhcccchHHHHHHHHHH-HcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 202 FDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC-RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 202 ~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
+.+| | |.+||++|..++ +.+...++|++ ++.+ ..++.++ .||.|.
T Consensus 268 ~~tG-G---------------------M~~Kl~aA~~a~~~~~g~~v~I~~---~~~i-~~~l~g~-~GT~i~ 313 (314)
T PRK12353 268 FAPG-S---------------------MLPKVEAAISFVESRPGRKAIITS---LEKA-KEALEGK-AGTVIV 313 (314)
T ss_pred cCCC-C---------------------cHHHHHHHHHHHHHcCCCEEEECC---chHH-HHHhCCC-CCeEec
Confidence 1133 3 999999999999 65555699998 3433 3555555 799885
|
|
| >cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.4e-18 Score=162.87 Aligned_cols=115 Identities=18% Similarity=0.282 Sum_probs=103.1
Q ss_pred cc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeee
Q 013702 21 IC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLN 98 (438)
Q Consensus 21 l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~n 98 (438)
++ .|+++|.+ |++|++.|.+++++...+ .|++..+|++.|+.+|+.|.|||++++ +.+.+|+++|
T Consensus 84 ~~~~l~~~Gi~----a~~l~~~~~~lit~~~~~---------~~~v~~~~~~~l~~ll~~g~VPVv~g~~~~~~~g~~~~ 150 (244)
T cd04260 84 LTSTLRAQGLK----AVALTGAQAGILTDDNYS---------NAKIIKVNPKKILSALKEGDVVVVAGFQGVTEDGEVTT 150 (244)
T ss_pred HHHHHHhCCCC----eEEechHHcCEEecCCCC---------ceeeeccCHHHHHHHHhCCCEEEecCCcccCCCCCEEE
Confidence 44 78888886 999999999999977542 688999999999999999999999997 8899999999
Q ss_pred c---ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 99 C---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 99 i---naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
+ ++|++|+.||.+|+|++|+|+|||+|++ +++++|++|+.+|+++++..|
T Consensus 151 l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~g 210 (244)
T cd04260 151 LGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQG 210 (244)
T ss_pred eCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHcC
Confidence 9 5999999999999999999999999884 358999999999999997654
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet |
| >PRK12686 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-18 Score=170.23 Aligned_cols=158 Identities=19% Similarity=0.171 Sum_probs=118.9
Q ss_pred eeeeeeecccEEEEEecccccCCC--cceeeeEee------eCHHHHHHHhcCCceEEEc-----CcccCCCCCee----
Q 013702 35 EVGVSVASGNFLAAKRKGVVDGVD--YGATGEVKK------VDVTRMRERLDGGCLVILS-----NLGYSSSGEVL---- 97 (438)
Q Consensus 35 avgl~g~~g~~i~a~~~~~~~~~d--~g~vG~v~~------v~~~~i~~ll~~g~IPVi~-----~i~~~~~g~~~---- 97 (438)
+..+++.++.. .+++++-.-..| .||.+.|.+ ||.+.|+.||++|+|||.+ |+..+ ++.++
T Consensus 131 g~~~~~~~a~~-~~~~~g~~~~~d~~~G~rrvV~sP~P~~ive~~~I~~Ll~~G~IpI~~GgggIPVv~~-~~~~~gv~a 208 (312)
T PRK12686 131 GPFYTEEEAKQ-QAEQPGSTFKEDAGRGYRRVVPSPKPQEIIEHDTIRTLVDGGNIVIACGGGGIPVIRD-DNTLKGVEA 208 (312)
T ss_pred cCccCHHHHHH-HHHHcCCcccccCCCCeEEeeCCCCCccccCHHHHHHHHHCCCEEEEeCCCCCCeEec-CCcEEeeec
Confidence 55678888877 333333111233 399999999 9999999999999999876 55443 45454
Q ss_pred ecChHHHHHHHHHHcCCCEEEEEecCcccc-----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCC
Q 013702 98 NCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGH 172 (438)
Q Consensus 98 ninaD~~A~~lA~aL~A~~li~ltdv~g~~-----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (438)
++|+|.+|+.||.+|+||+|+|||||+|+. +++++|++++.+|++.++.++.
T Consensus 209 vid~D~~Aa~LA~~L~Ad~LIiLTDVdGVy~~~~~p~ak~I~~I~~~e~~~li~~g~----------------------- 265 (312)
T PRK12686 209 VIDKDFASEKLAEQIDADLLIILTGVENVFINFNKPNQQKLDDITVAEAKQYIAEGQ----------------------- 265 (312)
T ss_pred ccCccHHHHHHHHHcCCCEEEEEeCchhhccCCCCCCCeECCccCHHHHHHHhhCCC-----------------------
Confidence 569999999999999999999999999874 4579999999999999976542
Q ss_pred CCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCC-CeEEeec
Q 013702 173 SDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGV-QRVHLLD 251 (438)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv-~~~~i~~ 251 (438)
+.+| | |.+||++|..+++.|+ .+++|++
T Consensus 266 -----------------------------~~tG-G---------------------M~pKveAA~~av~~g~g~~viI~~ 294 (312)
T PRK12686 266 -----------------------------FAPG-S---------------------MLPKVEAAIDFVESGEGKKAIITS 294 (312)
T ss_pred -----------------------------ccCC-C---------------------cHHHHHHHHHHHHhCCCCEEEEeC
Confidence 1133 3 9999999999999865 4566676
Q ss_pred cccCceeeeehhhcCCCccccc
Q 013702 252 GTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 252 g~~~~~ll~el~~~~g~GT~i~ 273 (438)
++.+ .+++.+. .||.|.
T Consensus 295 ---~~~i-~~aL~G~-~GT~I~ 311 (312)
T PRK12686 295 ---LEQA-KEALAGN-AGTHIT 311 (312)
T ss_pred ---chHH-HHHhCCC-CCeEEe
Confidence 3322 3445454 799884
|
|
| >cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.2e-18 Score=161.32 Aligned_cols=113 Identities=19% Similarity=0.269 Sum_probs=101.0
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeec--
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni-- 99 (438)
.|+++|.+ |+++++.|..++++.+++ +|++..++.+.|+.+++.|.|||++++ +.+++|+++|+
T Consensus 82 ~l~~~g~~----a~~l~~~~~~l~~~~~~~---------~~~i~~~~~~~l~~ll~~~~ipVi~G~~~~~~~g~~~~l~r 148 (239)
T cd04261 82 ALNRLGIK----AISLTGWQAGILTDGHHG---------KARIIDIDPDRIRELLEEGDVVIVAGFQGINEDGDITTLGR 148 (239)
T ss_pred HHHhCCCC----eEEechhhCCEEecCCCC---------cceechhhHHHHHHHHHcCCeEEEcCccccCCCCCEEecCC
Confidence 67888875 999999999999876532 789999999999999999999999998 88999999999
Q ss_pred -ChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCcccccCCHHHHHHHHHhh
Q 013702 100 -NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 -naD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~i~~l~~~e~~~l~~~g 148 (438)
|+|.+|+.+|.+|+|++|+++|||+|++ | ++++|++++.+|++++...|
T Consensus 149 g~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~l~~~G 205 (239)
T cd04261 149 GGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLEMASLG 205 (239)
T ss_pred CChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHHHHhcc
Confidence 9999999999999999999999999883 2 58899999999999986543
|
In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and |
| >cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-17 Score=160.04 Aligned_cols=113 Identities=19% Similarity=0.279 Sum_probs=100.8
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeec--
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni-- 99 (438)
.|+++|.+ |+++++.+..++++.+.+ .|++..++.+.|+.++++|.|||++++ +.+.+|+++|+
T Consensus 82 ~l~~~g~~----a~~l~~~~~~l~~~~~~~---------~~~~~~~~~~~l~~ll~~g~ipVi~g~~~~~~~g~~~~l~~ 148 (239)
T cd04246 82 ALNRLGIK----AISLTGWQAGILTDDHHG---------NARIIDIDPKRILEALEEGDVVVVAGFQGVNEDGEITTLGR 148 (239)
T ss_pred HHHhCCCC----eEEeccccCCEEecCCCC---------ceeechhhHHHHHHHHhcCCEEEEcCccccCCCCCEEecCC
Confidence 78888876 999999999999876532 588999999999999999999999997 88889999999
Q ss_pred -ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 100 -NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 -naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
|+|.+|+.+|.+|+|++|+|+|||+|++ +++++|++++++|+++++..|
T Consensus 149 g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~l~~~G 205 (239)
T cd04246 149 GGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLEMASLG 205 (239)
T ss_pred CChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHHHHhCC
Confidence 8999999999999999999999999884 358999999999999986543
|
In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati |
| >PRK09411 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=161.86 Aligned_cols=134 Identities=20% Similarity=0.165 Sum_probs=111.1
Q ss_pred CCcceeeeE-------eeeCHHHHHHHhcCCceEEEc-----CcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCc
Q 013702 57 VDYGATGEV-------KKVDVTRMRERLDGGCLVILS-----NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP 124 (438)
Q Consensus 57 ~d~g~vG~v-------~~v~~~~i~~ll~~g~IPVi~-----~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~ 124 (438)
.|-.+.++| ..||.+.|+.||++|+|||++ |++.+.+|..+|||+|.+|+.||.+|+||+|+|||||+
T Consensus 146 ~dg~g~rrVVpSP~P~~iVe~~~I~~Ll~~G~IVI~~gGGGIPV~~~~~G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDVd 225 (297)
T PRK09411 146 RDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDAD 225 (297)
T ss_pred ecCCceEEEccCCCCcceECHHHHHHHHHCCCEEEecCCCCCCeEEcCCCeEEecCHHHHHHHHHHHhCCCEEEEEeCch
Confidence 455679999 999999999999999999887 77777678899999999999999999999999999999
Q ss_pred ccc-----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCC
Q 013702 125 ILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNG 199 (438)
Q Consensus 125 g~~-----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (438)
|+. +++++|++++.+|++.++..
T Consensus 226 GV~~n~~~p~~~~I~~it~~e~~~~~~~---------------------------------------------------- 253 (297)
T PRK09411 226 AVYENWGTPQQRAIRHATPDELAPFAKA---------------------------------------------------- 253 (297)
T ss_pred hhccCCCCCCCcCCCCcCHHHHHHhccC----------------------------------------------------
Confidence 873 45789999999998776431
Q ss_pred CccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 200 VGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 200 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
+| | |.+||++|..+++.|.++++|.+ .+.+ .+++.+. .||.|.
T Consensus 254 ----~G-g---------------------M~pKVeAA~~~v~~~g~~a~I~~---l~~~-~~~l~G~-~GT~I~ 296 (297)
T PRK09411 254 ----DG-A---------------------MGPKVTAVSGYVRSRGKPAWIGA---LSRI-EETLAGE-AGTCIS 296 (297)
T ss_pred ----CC-C---------------------cHHHHHHHHHHHHhCCCeEEECC---hhHH-HHHHCCC-CCeEEe
Confidence 23 3 99999999999999888898875 2322 3555555 699875
|
|
| >PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.5e-17 Score=163.59 Aligned_cols=129 Identities=19% Similarity=0.234 Sum_probs=106.0
Q ss_pred eeeCHHHHHHHhcCCceEEEcCcc----cCCCCCeeec----ChHHHHHHHHHHcCCCEEEEEecCcccc-----CCCcc
Q 013702 66 KKVDVTRMRERLDGGCLVILSNLG----YSSSGEVLNC----NTYEVATACALAIEADKLICIIDGPILD-----ESGHL 132 (438)
Q Consensus 66 ~~v~~~~i~~ll~~g~IPVi~~i~----~~~~g~~~ni----naD~~A~~lA~aL~A~~li~ltdv~g~~-----~~~~~ 132 (438)
.-||.+.|+.||++|.|||+++-+ ++.+|+++|+ |+|.+|+.||.+|+||+|+|||||+|+. +++++
T Consensus 171 ~ive~~aI~~LLe~G~IvI~~GgGGiPV~~~~g~~~gveaViD~D~aAa~LA~~L~AD~LIiLTdVdGVy~~~~~p~~~~ 250 (313)
T PRK12454 171 GIVEIEVIKALVENGFIVIASGGGGIPVIEEDGELKGVEAVIDKDLASELLAEELNADIFIILTDVEKVYLNYGKPDQKP 250 (313)
T ss_pred cccCHHHHHHHHHCCCEEEEeCCCccceEcCCCcEEeeeeecCccHHHHHHHHHcCCCEEEEEeCCceeeCCCCCCCCeE
Confidence 357899999999999999999544 6778888885 6799999999999999999999999874 46899
Q ss_pred cccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccc
Q 013702 133 IRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 212 (438)
Q Consensus 133 i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 212 (438)
|++++.+|+++++.++.
T Consensus 251 i~~It~~e~~~~i~~g~--------------------------------------------------------------- 267 (313)
T PRK12454 251 LDKVTVEEAKKYYEEGH--------------------------------------------------------------- 267 (313)
T ss_pred ccccCHHHHHHHHhcCC---------------------------------------------------------------
Confidence 99999999999976532
Q ss_pred ccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 213 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|++|| |.+||++|..+++.|+.++||.+. +. +.+++.++ .||.|.
T Consensus 268 --~~~Gg---------M~pKv~AA~~~v~~gg~~a~I~~~---~~-i~~aL~G~-~GT~I~ 312 (313)
T PRK12454 268 --FKAGS---------MGPKILAAIRFVENGGKRAIIASL---EK-AVEALEGK-TGTRII 312 (313)
T ss_pred --cCCCC---------hHHHHHHHHHHHHcCCCeEEECch---HH-HHHHHCCC-CCeEeC
Confidence 22233 999999999999999999999963 33 34555555 699985
|
|
| >PRK07757 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.8e-16 Score=137.13 Aligned_cols=135 Identities=31% Similarity=0.553 Sum_probs=115.1
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCC
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 357 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgq 357 (438)
+.||+++.+|++.+.+++..........+.+.+.+..++..++++..+++++|++.+.. ...+.+++..++|+|+|||+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~lvG~~~l~~-~~~~~~~i~~v~V~p~~rg~ 80 (152)
T PRK07757 2 MEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEEEGEIVGCCALHI-LWEDLAEIRSLAVSEDYRGQ 80 (152)
T ss_pred ceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCcEEEEEECCEEEEEEEEEe-ccCCceEEEEEEECHHHcCC
Confidence 57999999999999999988766665556677888888888889999999999999974 34466789999999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEeceeccchHhhhhhcCC
Q 013702 358 GQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLS 414 (438)
Q Consensus 358 GiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~ 414 (438)
|+|++|++.+++++++.++..+.+.+ .+.+||+|+||+..+..++|+.+|..-..+
T Consensus 81 Glg~~Ll~~l~~~a~~~g~~~i~~~~-~~~~~Y~k~GF~~~~~~~~~~~~~~~~~~~ 136 (152)
T PRK07757 81 GIGRMLVEACLEEARELGVKRVFALT-YQPEFFEKLGFREVDKEALPQKVWADCIKC 136 (152)
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEe-CcHHHHHHCCCEEcccccCChhHHhcCccC
Confidence 99999999999999999999987665 457999999999999988987776654433
|
|
| >cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.2e-17 Score=157.22 Aligned_cols=130 Identities=21% Similarity=0.277 Sum_probs=104.5
Q ss_pred HHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCC--HHH
Q 013702 70 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLT--LQE 140 (438)
Q Consensus 70 ~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~--~~e 140 (438)
.+.|+.||+.|+|||+++.+.-..++..++|+|++|+.||.+|+||+|+|+|||+|++ +++++|++++ .+|
T Consensus 113 ~~~i~~ll~~g~iPVv~~~d~v~~~~~~~~~~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e 192 (251)
T cd04242 113 RNTLETLLELGVIPIINENDTVATEEIRFGDNDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDE 192 (251)
T ss_pred HHHHHHHHHCCCEEEEcCCCCeeeeccccCChHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHH
Confidence 6889999999999999974333334566889999999999999999999999999873 2589999999 788
Q ss_pred HHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccccccccc
Q 013702 141 ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQ 220 (438)
Q Consensus 141 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~ 220 (438)
++++..... +.+.+| |
T Consensus 193 ~~~~~~~~~--------------------------------------------------~~~~tg-g------------- 208 (251)
T cd04242 193 IEAMAGGSG--------------------------------------------------SSVGTG-G------------- 208 (251)
T ss_pred HHHHhcccC--------------------------------------------------cCcccC-C-------------
Confidence 877741110 111233 3
Q ss_pred chhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 221 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|.+||++|..|.++|++ ++|+|++.|+. +.+++.+++.||.|.
T Consensus 209 --------m~~Kl~a~~~a~~~gi~-v~I~~g~~~~~-i~~~l~g~~~GT~i~ 251 (251)
T cd04242 209 --------MRTKLKAARIATEAGIP-VVIANGRKPDV-LLDILAGEAVGTLFL 251 (251)
T ss_pred --------cHHHHHHHHHHHHCCCc-EEEEcCCCCCH-HHHHHcCCCCCeEeC
Confidence 99999999999999997 99999999985 567778888999874
|
G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir |
| >cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-16 Score=156.23 Aligned_cols=132 Identities=19% Similarity=0.219 Sum_probs=103.0
Q ss_pred eCHHHHHHHhcCCceEEEcCccc-------CCCCCeee--cChHHHHHHHHHHcCCCEEEEEecCcccc------CCCcc
Q 013702 68 VDVTRMRERLDGGCLVILSNLGY-------SSSGEVLN--CNTYEVATACALAIEADKLICIIDGPILD------ESGHL 132 (438)
Q Consensus 68 v~~~~i~~ll~~g~IPVi~~i~~-------~~~g~~~n--inaD~~A~~lA~aL~A~~li~ltdv~g~~------~~~~~ 132 (438)
-..+.|+.||+.|+||||++.+. +.+++.+| +|+|++|+.+|.+|+||+|+|+|||+|++ +++++
T Consensus 138 ~~~~~l~~lL~~g~iPVi~~nD~v~~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~ 217 (284)
T cd04256 138 NLNGTLEELLRLNIIPIINTNDAVSPPPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKL 217 (284)
T ss_pred HHHHHHHHHHHCCCEEEEeCCCcccccccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeE
Confidence 34789999999999999986322 22345555 99999999999999999999999999884 34889
Q ss_pred cccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccc
Q 013702 133 IRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 212 (438)
Q Consensus 133 i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 212 (438)
|++++..+...+... . .+.+++| |
T Consensus 218 I~~i~~~~~~~~~~~-~-------------------------------------------------~s~~gtG-G----- 241 (284)
T cd04256 218 IHTFYPGDQQSITFG-T-------------------------------------------------KSRVGTG-G----- 241 (284)
T ss_pred cccccHhHHHHhhcc-c-------------------------------------------------ccCcccC-C-----
Confidence 999998665544211 1 0112244 4
Q ss_pred ccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 213 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|.+||++|..|.+.|++ ++|++|+.++. +.+++.++..||.|.
T Consensus 242 ----------------M~~Kl~Aa~~a~~~Gi~-v~I~~G~~~~~-i~~~l~G~~~GT~~~ 284 (284)
T cd04256 242 ----------------MEAKVKAALWALQGGTS-VVITNGMAGDV-ITKILEGKKVGTFFT 284 (284)
T ss_pred ----------------cHHHHHHHHHHHHCCCe-EEEEcCCCccH-HHHHHcCCCCCEEeC
Confidence 99999999999999997 89999999986 567778888899873
|
G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. |
| >PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-16 Score=152.65 Aligned_cols=101 Identities=35% Similarity=0.438 Sum_probs=90.9
Q ss_pred cceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcc-cCCCCCe---eecChHHHHHHH
Q 013702 33 WHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLG-YSSSGEV---LNCNTYEVATAC 108 (438)
Q Consensus 33 ~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~-~~~~g~~---~ninaD~~A~~l 108 (438)
..++++.+.++++....+... .++.+.|+.+|++|.|||++|+. .+.+|+. .|+|+|.+|+.|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~i~~~l~~~~ipVv~g~~~~~~~g~~~~~~~~~sD~~A~~l 166 (242)
T PF00696_consen 100 AHAVGLSLSDGGISAAKRDAR-------------EVDKEAIRELLEQGIIPVVSGFAGIDDDGEVTTLGNVSSDYIAALL 166 (242)
T ss_dssp HHEEEHHHTGGTEEEEEEESS-------------EEHHHHHHHHHHTTSEEEEESEEEEETTSTEEEEEEETHHHHHHHH
T ss_pred HHHHhhhhhcccchhhhhhhh-------------hhHHHHHHHHHHCCCEEEEeCCcccCCCCCcccCCCCCHHHHHHHH
Confidence 358999999999888776421 78999999999999999999986 8899999 999999999999
Q ss_pred HHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHH
Q 013702 109 ALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIR 146 (438)
Q Consensus 109 A~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~ 146 (438)
|.+|+|++|+|+|||+|+. +++++|++|+.+|+.++..
T Consensus 167 A~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~ 211 (242)
T PF00696_consen 167 AAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELAS 211 (242)
T ss_dssp HHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHH
T ss_pred HHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHh
Confidence 9999999999999999873 3689999999999999974
|
In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A .... |
| >PRK05429 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=9.8e-17 Score=163.45 Aligned_cols=135 Identities=24% Similarity=0.340 Sum_probs=107.4
Q ss_pred eC-HHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCH-
Q 013702 68 VD-VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL- 138 (438)
Q Consensus 68 v~-~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~- 138 (438)
+| .+.|..||+.|+|||+++.+.....++.++|+|++|+.||.+|+|++|+|+|||+|++ |++++|++++.
T Consensus 119 ln~~~~i~~Ll~~g~IPVi~~nd~v~~~~l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~ 198 (372)
T PRK05429 119 LNARNTLRTLLELGVVPIINENDTVATDEIKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEI 198 (372)
T ss_pred hhHHHHHHHHHHCCCEEEEcCCCccceecccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccC
Confidence 44 5889999999999999975433344566799999999999999999999999999873 35899999987
Q ss_pred -HHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccc
Q 013702 139 -QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAI 217 (438)
Q Consensus 139 -~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~ 217 (438)
+++++++... ++.+++| |
T Consensus 199 ~~e~~~~~~~~--------------------------------------------------~~~~gtG-G---------- 217 (372)
T PRK05429 199 TDELEAMAGGA--------------------------------------------------GSGLGTG-G---------- 217 (372)
T ss_pred CHHHHHHhcCC--------------------------------------------------CCCcCcC-C----------
Confidence 5676664321 0112233 3
Q ss_pred cccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCCc
Q 013702 218 GGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 276 (438)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~ 276 (438)
|.+||++|..|.+.|++ ++|+|++.++. +.+++.++..||.|.+..
T Consensus 218 -----------M~~Kl~aa~~a~~~Gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~~ 263 (372)
T PRK05429 218 -----------MATKLEAARIATRAGIP-VVIASGREPDV-LLRLLAGEAVGTLFLPQE 263 (372)
T ss_pred -----------cHHHHHHHHHHHHCCCe-EEEEcCCCccH-HHHHhcCCCCCEEEeeCC
Confidence 99999999999999997 99999998884 677888888999997543
|
|
| >TIGR00746 arcC carbamate kinase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-16 Score=157.33 Aligned_cols=128 Identities=20% Similarity=0.211 Sum_probs=100.1
Q ss_pred eeCHHHHHHHhcCCceEEEcCccc----CCCCC----eeecChHHHHHHHHHHcCCCEEEEEecCcccc-----CCCccc
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGY----SSSGE----VLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLI 133 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~----~~~g~----~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-----~~~~~i 133 (438)
.++.+.|+.||+.|.|+|.++-|. .+++. .+|+|+|++|+.+|.+|+||+|||||||+|+. +++++|
T Consensus 169 iv~~~~I~~LL~~G~iVI~~ggggiPvi~e~~~~~g~e~~id~D~lAa~lA~~l~AD~LIiLTDVdGVy~~~~~p~a~~i 248 (310)
T TIGR00746 169 IVEAETIKTLVENGVIVISSGGGGVPVVLEGAELKGVEAVIDKDLASEKLAEEVNADILVILTDVDAVYINYGKPDEKAL 248 (310)
T ss_pred hccHHHHHHHHHCCCEEEeCCCCCcCEEecCCeEEeeEecCCHHHHHHHHHHHhCCCEEEEEeCCCceeCCCCCCCCcCC
Confidence 488999999999997544443222 23343 34899999999999999999999999999874 468999
Q ss_pred ccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccc
Q 013702 134 RFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQ 213 (438)
Q Consensus 134 ~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 213 (438)
++++.+|++.++..+. +.+| |
T Consensus 249 ~~it~~e~~~~~~~g~----------------------------------------------------~~tG-g------ 269 (310)
T TIGR00746 249 REVTVEELEDYYKAGH----------------------------------------------------FAAG-S------ 269 (310)
T ss_pred cCcCHHHHHHHHhcCC----------------------------------------------------cCCC-C------
Confidence 9999999888864322 1133 3
Q ss_pred cccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 214 GFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|.+||++|..+|+.|+.++||++ ++. +.+++.++ .||.|.
T Consensus 270 ---------------M~~Kl~AA~~~~~~g~~~v~I~~---~~~-i~~~l~G~-~GT~I~ 309 (310)
T TIGR00746 270 ---------------MGPKVEAAIEFVESGGKRAIITS---LEN-AVEALEGK-AGTRVT 309 (310)
T ss_pred ---------------cHHHHHHHHHHHHhCCCeEEEec---hHH-HHHHHCCC-CCcEEe
Confidence 99999999999999999999998 343 45666677 799885
|
The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff. |
| >PRK12354 carbamate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.4e-16 Score=152.85 Aligned_cols=135 Identities=20% Similarity=0.190 Sum_probs=108.2
Q ss_pred CcceeeeEe-------eeCHHHHHHHhcCCceEEEc-----CcccCCCCCeee----cChHHHHHHHHHHcCCCEEEEEe
Q 013702 58 DYGATGEVK-------KVDVTRMRERLDGGCLVILS-----NLGYSSSGEVLN----CNTYEVATACALAIEADKLICII 121 (438)
Q Consensus 58 d~g~vG~v~-------~v~~~~i~~ll~~g~IPVi~-----~i~~~~~g~~~n----inaD~~A~~lA~aL~A~~li~lt 121 (438)
|-.+.++|. .++.+.|+.||++|+|||.+ |+..+.+++.+| +|+|.+|+.||.+|+||+|+|||
T Consensus 146 dg~g~rrVv~SP~P~~ive~~~I~~Ll~~g~ivIa~GGGGIPV~~~~~~~~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLT 225 (307)
T PRK12354 146 DGDYFRRVVPSPRPKRIVEIRPIRWLLEKGHLVICAGGGGIPVVYDADGKLHGVEAVIDKDLAAALLAEQLDADLLLILT 225 (307)
T ss_pred cCCceEEEecCCCCcceeCHHHHHHHHHCCCEEEEeCCCccCeEecCCCceeeeeecCCccHHHHHHHHHcCCCEEEEEe
Confidence 444677877 79999999999999998887 887776677766 47999999999999999999999
Q ss_pred cCcccc-----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccc
Q 013702 122 DGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATF 196 (438)
Q Consensus 122 dv~g~~-----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (438)
||+|+. +++++|++++.+|++++ +.
T Consensus 226 dVdGVy~~~~~p~~k~i~~it~~e~~~~---~f----------------------------------------------- 255 (307)
T PRK12354 226 DVDAVYLDWGKPTQRAIAQATPDELREL---GF----------------------------------------------- 255 (307)
T ss_pred CCcceecCCCCCCCeECCCCCHHHHHhh---CC-----------------------------------------------
Confidence 999873 34689999999888876 11
Q ss_pred cCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCC
Q 013702 197 NNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 275 (438)
Q Consensus 197 ~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d 275 (438)
.+| | |.+||++|+.+++.|.++++|.+. +. +.+++.++ .||.|..+
T Consensus 256 ------~~G-g---------------------M~pKV~AA~~~~~~gg~~viI~~~---~~-l~~al~G~-~GT~I~~~ 301 (307)
T PRK12354 256 ------AAG-S---------------------MGPKVEAACEFVRATGKIAGIGSL---ED-IQAILAGE-AGTRISPE 301 (307)
T ss_pred ------CcC-C---------------------hHHHHHHHHHHHHhCCCEEEECCH---HH-HHHHHCCC-CceEEecC
Confidence 133 3 999999999999988888988642 22 45666554 79999764
|
|
| >PRK12314 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-16 Score=155.02 Aligned_cols=133 Identities=23% Similarity=0.287 Sum_probs=101.1
Q ss_pred eeCHHHHHHHhcCCceEEEcC---cccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccC
Q 013702 67 KVDVTRMRERLDGGCLVILSN---LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 136 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~---i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l 136 (438)
....+.|+.||+.|+|||+++ ++.++.+. .+.++|++|+.||.+|+|++|+|+|||+|++ |++++|+.|
T Consensus 120 ~~~~~~l~~ll~~g~IPVv~~nd~v~~~~~~~-~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I 198 (266)
T PRK12314 120 ANVKNTFESLLELGILPIVNENDAVATDEIDT-KFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEV 198 (266)
T ss_pred HHHHHHHHHHHHCCCEEEEcCCCCeeeccccc-eecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEe
Confidence 344789999999999999995 44444443 3558999999999999999999999999883 347788888
Q ss_pred CH--HHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccc
Q 013702 137 TL--QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQG 214 (438)
Q Consensus 137 ~~--~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~ 214 (438)
+. .+..++... . ++.+.+| |
T Consensus 199 ~~~~~~~~~~~~~-~-------------------------------------------------~~~~~tG-G------- 220 (266)
T PRK12314 199 TEITEEILALAGG-A-------------------------------------------------GSKFGTG-G------- 220 (266)
T ss_pred cCCCHHHHHHhcc-C-------------------------------------------------CCCcccC-c-------
Confidence 64 333332111 0 0112233 3
Q ss_pred ccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 215 FAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
|.+|+++|..|.+.|++ ++|++|+.|+. +.+++.++..||.|.+
T Consensus 221 --------------M~~Kl~aa~~a~~~gv~-v~I~~g~~~~~-i~~~l~g~~~GT~i~~ 264 (266)
T PRK12314 221 --------------MVTKLKAAKFLMEAGIK-MVLANGFNPSD-ILDFLEGESIGTLFAP 264 (266)
T ss_pred --------------hHHHHHHHHHHHHCCCe-EEEEcCCCchH-HHHHHcCCCCceEEcc
Confidence 99999999999999997 99999999986 4677777888999865
|
|
| >PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-15 Score=134.10 Aligned_cols=124 Identities=21% Similarity=0.294 Sum_probs=97.2
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeecC----CCeEEEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK----EKCGEVAAI 348 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~----~~~~~I~~v 348 (438)
.+.||+++.+|++.+.+++.......+......+.+...+ ..++++..++++||++.+..... ...++|..+
T Consensus 3 ~~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~i~~l 82 (144)
T PRK10146 3 ACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQEL 82 (144)
T ss_pred ccEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccchhheehee
Confidence 4679999999999999998876544332211223333332 34678888999999999864221 124578899
Q ss_pred EECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 349 ~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
+|+|+|||+|+|+.|+++++++|++.|++.+.+.+ ..+++||+++||+..+.
T Consensus 83 ~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~fY~~~Gf~~~~~ 138 (144)
T PRK10146 83 VVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHF 138 (144)
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHHHHHHcCCchhhh
Confidence 99999999999999999999999999999999987 48999999999998653
|
|
| >cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.7e-16 Score=151.68 Aligned_cols=127 Identities=17% Similarity=0.222 Sum_probs=101.4
Q ss_pred eeCHHHHHHHhcCCceEEEc-----CcccCCCCCeee----cChHHHHHHHHHHcCCCEEEEEecCcccc-----CCCcc
Q 013702 67 KVDVTRMRERLDGGCLVILS-----NLGYSSSGEVLN----CNTYEVATACALAIEADKLICIIDGPILD-----ESGHL 132 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~-----~i~~~~~g~~~n----inaD~~A~~lA~aL~A~~li~ltdv~g~~-----~~~~~ 132 (438)
-|+.+.|+.||++|+|||++ |+..+. ++++| +|+|++|+.+|.+|+||+|+|+|||+|+. +++++
T Consensus 168 iv~~~~I~~Ll~~g~IpI~~GggGiPv~~~~-~~~~gveaVid~D~~AallA~~l~Ad~LiilTdVdGVy~~~~~pda~~ 246 (308)
T cd04235 168 IVEIEAIKTLVDNGVIVIAAGGGGIPVVREG-GGLKGVEAVIDKDLASALLAEEINADLLVILTDVDNVYINFGKPNQKA 246 (308)
T ss_pred ccCHHHHHHHHHCCCEEEEECCCccCEEEcC-CceeeeeeccCccHHHHHHHHHcCCCEEEEEecCCeEECCCCCCCCeE
Confidence 46889999999999999999 666553 55555 68899999999999999999999999873 35899
Q ss_pred cccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccc
Q 013702 133 IRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 212 (438)
Q Consensus 133 i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 212 (438)
|++++.+|+.+++.++. +.+| |
T Consensus 247 i~~Is~~e~~~l~~~g~----------------------------------------------------~~tG-G----- 268 (308)
T cd04235 247 LEQVTVEELEKYIEEGQ----------------------------------------------------FAPG-S----- 268 (308)
T ss_pred cCCcCHHHHHHHHhcCc----------------------------------------------------cccC-C-----
Confidence 99999999999876542 1123 3
Q ss_pred ccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 213 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|.+||++|+.+++.|..+++|.+ ++.+ .+++.++ .||.|.
T Consensus 269 ----------------M~pKv~aA~~~a~~gg~~v~I~~---~~~i-~~aL~G~-~GT~I~ 308 (308)
T cd04235 269 ----------------MGPKVEAAIRFVESGGKKAIITS---LENA-EAALEGK-AGTVIV 308 (308)
T ss_pred ----------------cHHHHHHHHHHHHhCCCeEEECC---HHHH-HHHHCCC-CCeEEC
Confidence 99999999999999888899987 3333 4555555 699873
|
Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK). |
| >cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;) | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.6e-16 Score=146.54 Aligned_cols=113 Identities=19% Similarity=0.225 Sum_probs=98.3
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcC-CceEEEcC-cccCCCCCeeec-
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDG-GCLVILSN-LGYSSSGEVLNC- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~-g~IPVi~~-i~~~~~g~~~ni- 99 (438)
.|+++|.+ +.++++.+..+.+.. +++++++..++.+.|+.+++. |.|||+++ ++.+++|+++++
T Consensus 68 ~l~~~Gi~----a~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~l~~~~~vpVv~g~i~~~~~g~~~~l~ 134 (227)
T cd04234 68 ALRDRGIK----ARSLDARQAGITTDD---------NHGAARIIEISYERLKELLAEIGKVPVVTGFIGRNEDGEITTLG 134 (227)
T ss_pred HHHHCCCC----eEEeCHHHCCEEcCC---------ccchhhHHHHHHHHHHHHHhhCCCEEEecCceecCCCCCEEEee
Confidence 57777875 999999998777633 456888999999999999999 99999999 588889999888
Q ss_pred --ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 100 --NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 --naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
++|.+|+.+|.+|+|++|+|+|||+|++ +++++|++++.+|++++...|
T Consensus 135 rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~l~~~G 192 (227)
T cd04234 135 RGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYFG 192 (227)
T ss_pred CCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHHHHhCC
Confidence 6999999999999999999999999874 257899999999999986544
|
AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd |
| >PTZ00489 glutamate 5-kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-15 Score=148.31 Aligned_cols=130 Identities=16% Similarity=0.183 Sum_probs=102.1
Q ss_pred HHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCcc---cccCCHH
Q 013702 70 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E----SGHL---IRFLTLQ 139 (438)
Q Consensus 70 ~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~---i~~l~~~ 139 (438)
.+.|+.||+.|.|||+++.+..+..++.|.|+|.+|+.+|.+++||+|+|+|||+|++ | ++++ |++++.+
T Consensus 118 ~~~l~~lL~~g~VPIinend~~~~~e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~ 197 (264)
T PTZ00489 118 HNTIEVLISHKVIPIINENDATALHELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPD 197 (264)
T ss_pred HHHHHHHHHCCCEEEECCCCCcccceeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHH
Confidence 7889999999999999998777777899999999999999999999999999999873 2 2444 7788876
Q ss_pred HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccc
Q 013702 140 EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGG 219 (438)
Q Consensus 140 e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~ 219 (438)
++.... +. .+.+.+| |
T Consensus 198 ~~~~~~--~~-------------------------------------------------~~~~~tG-G------------ 213 (264)
T PTZ00489 198 DLVAEA--TP-------------------------------------------------NNRFATG-G------------ 213 (264)
T ss_pred HHHHhc--Cc-------------------------------------------------CCCcccC-C------------
Confidence 553321 11 0111233 3
Q ss_pred cchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcC--CCcccccC
Q 013702 220 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD--GMGTMVAS 274 (438)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~--g~GT~i~~ 274 (438)
|.+||.+|..|.+.|++ +.|++|+.++.+ ..++.++ ..||.|.+
T Consensus 214 ---------M~~Kl~aa~~a~~~Gi~-v~I~~g~~~~~i-~~~l~g~~~~~GT~~~~ 259 (264)
T PTZ00489 214 ---------IVTKLQAAQFLLERGGK-MYLSSGFHLEKA-RDFLIGGSHEIGTLFYP 259 (264)
T ss_pred ---------hHHHHHHHHHHHHCCCC-EEEEeCCCchHH-HHHHcCCCCCCceEEee
Confidence 99999999999999997 899999999865 5555443 37999865
|
|
| >PRK13402 gamma-glutamyl kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-15 Score=154.77 Aligned_cols=131 Identities=20% Similarity=0.281 Sum_probs=103.7
Q ss_pred HHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCH--HHH
Q 013702 71 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL--QEA 141 (438)
Q Consensus 71 ~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~--~e~ 141 (438)
+.|+.||+.|.||||++.......++...|+|++|+.+|.+|+||.|+|+|||+|++ |++++|++++. +++
T Consensus 119 ~~l~~LL~~g~IPIinenD~v~~~el~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~ 198 (368)
T PRK13402 119 NTINVLLERGILPIINENDAVTTDRLKVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEI 198 (368)
T ss_pred HHHHHHHHCCcEEEEeCCCcEeecccccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHH
Confidence 799999999999999975333335566779999999999999999999999999883 25899999985 455
Q ss_pred HHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccc
Q 013702 142 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 221 (438)
Q Consensus 142 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~ 221 (438)
..+... .++++++| |
T Consensus 199 ~~l~~~--------------------------------------------------~~s~~gtG-G-------------- 213 (368)
T PRK13402 199 YAMAGG--------------------------------------------------AGSNVGTG-G-------------- 213 (368)
T ss_pred HHHhcc--------------------------------------------------cccCcCcC-C--------------
Confidence 544211 11223344 4
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCC
Q 013702 222 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 275 (438)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d 275 (438)
|.+||++|..|.+.|++ ++|++++.++. +.+++.++..||.|.+.
T Consensus 214 -------M~~Kl~Aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 214 -------MRTKIQAAKIAMSHGIE-TFIGNGFTADI-FNQLLKGQNPGTYFTPE 258 (368)
T ss_pred -------chHHHHHHHHHHHcCCc-EEEEcCCCchH-HHHHhcCCCCceEEecC
Confidence 99999999999999998 89999999884 56777788889999754
|
|
| >PRK08210 aspartate kinase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.62 E-value=2e-15 Score=155.78 Aligned_cols=114 Identities=17% Similarity=0.271 Sum_probs=102.1
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeec--
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni-- 99 (438)
.|+++|.+ |+++++.|.+++++.+.+ .|++..++++.|..+++.|.|||++++ +.+.+|+++|+
T Consensus 89 ~l~~~Gi~----a~~l~~~~~~~~t~~~~~---------~~~v~~~~~~~l~~~l~~~~vpVi~G~~~~~~~g~~~~l~r 155 (403)
T PRK08210 89 MLNENGIK----AVALTGGQAGIITDDNFT---------NAKIIEVNPDRILEALEEGDVVVVAGFQGVTENGDITTLGR 155 (403)
T ss_pred HHHhCCCC----eEEechHHccEEccCCCC---------ceeeehhhHHHHHHHHhcCCEEEeeCeeecCCCCCEEEeCC
Confidence 67788876 999999999999977542 588999999999999999999999998 88999999999
Q ss_pred -ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhh
Q 013702 100 -NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 100 -naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
++|.+|+.||.+|+|++++|+|||+|+. +++++|++|+.+|+.+++..|.
T Consensus 156 g~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~G~ 213 (403)
T PRK08210 156 GGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQGA 213 (403)
T ss_pred CchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHCCc
Confidence 6999999999999999999999999884 3589999999999999976553
|
|
| >PRK07922 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.3e-14 Score=132.12 Aligned_cols=127 Identities=28% Similarity=0.532 Sum_probs=102.8
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEE-ECCEEEEEEEEeeecCCCeEEEEEEEECccc
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPEC 354 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~-~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~y 354 (438)
..+.||+++++|.+.+.+++................+......++++. .+++++|++.+... ....++|..++|+|+|
T Consensus 4 ~~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~iiG~~~~~~~-~~~~~~i~~l~V~p~~ 82 (169)
T PRK07922 4 GAITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVM-WEDLAEIRTVAVDPAA 82 (169)
T ss_pred CCceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCcEEEEEecCCcEEEEEEEeec-CCCceEEEEEEECHHH
Confidence 446899999999999999998766544333334444445556788888 89999999988753 3456889999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEeceeccc
Q 013702 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 355 RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~~lp 404 (438)
||+|+|++|+++++++|++.|++.+++.+. +.+||+|+||+..+....+
T Consensus 83 rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~-~~~fY~k~GF~~~~~~~~~ 131 (169)
T PRK07922 83 RGRGVGHAIVERLLDVARELGLSRVFVLTF-EVEFFARHGFVEIDGTPVT 131 (169)
T ss_pred hCCCHHHHHHHHHHHHHHHcCCCEEEEEec-cHHHHHHCCCEECccccCC
Confidence 999999999999999999999999987764 5799999999998755433
|
|
| >COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-15 Score=147.35 Aligned_cols=136 Identities=21% Similarity=0.315 Sum_probs=111.5
Q ss_pred eeC-HHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCccc-------cCCCcccccCCH
Q 013702 67 KVD-VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-------DESGHLIRFLTL 138 (438)
Q Consensus 67 ~v~-~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~-------~~~~~~i~~l~~ 138 (438)
..| ...|+.||+.|.||||+.+......|+...|+|++|+.+|...+||.|++|||++|+ +|+.++|++++.
T Consensus 116 y~Nar~Tl~~Ll~~gvVPIINENDtva~~EikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~ 195 (369)
T COG0263 116 YLNARNTLSALLELGVVPIINENDTVATEEIKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEE 195 (369)
T ss_pred HHHHHHHHHHHHHCCceeeecCCCceeeeeeeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcc
Confidence 344 578999999999999999988888899999999999999999999999999999998 256788887763
Q ss_pred --HHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccccc
Q 013702 139 --QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 216 (438)
Q Consensus 139 --~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~ 216 (438)
.|++.+.. | .++.+++| |
T Consensus 196 it~ei~~~ag-g-------------------------------------------------sgs~~GTG-G--------- 215 (369)
T COG0263 196 ITPEIEAMAG-G-------------------------------------------------SGSELGTG-G--------- 215 (369)
T ss_pred cCHHHHHHhc-C-------------------------------------------------CCCCCCcc-c---------
Confidence 24444421 1 23445566 5
Q ss_pred ccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCCc
Q 013702 217 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 276 (438)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~ 276 (438)
|.+||.||..|+++|++ +.|.+|+.++. +.++..+...||.|.+..
T Consensus 216 ------------M~TKl~AA~iA~~aG~~-~iI~~g~~~~~-i~~~~~~~~~GT~F~~~~ 261 (369)
T COG0263 216 ------------MRTKLEAAKIATRAGVP-VIIASGSKPDV-ILDALEGEAVGTLFEPQA 261 (369)
T ss_pred ------------HHHHHHHHHHHHHcCCc-EEEecCCCcch-HHHHHhCCCCccEEecCC
Confidence 99999999999999997 88999999984 567778888999988544
|
|
| >PTZ00330 acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.5e-14 Score=124.87 Aligned_cols=121 Identities=26% Similarity=0.365 Sum_probs=93.0
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---------CcEEEEEECCEEEEEEEEeeec-----CCCe
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFF-----KEKC 342 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---------~~~~V~~~dg~iVG~~~l~~~~-----~~~~ 342 (438)
.+.||+++++|++.+.+++........ .+.+.+.... ..++++..++++||++.+.... ....
T Consensus 6 ~~~ir~~~~~D~~~i~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~ 82 (147)
T PTZ00330 6 SLELRDLEEGDLGSVLELLSHLTSAPA---LSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCV 82 (147)
T ss_pred eEEEEEcccccHHHHHHHHHHhcCCCc---cchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEeccccccCCCce
Confidence 368999999999999999876543222 2222222211 1245555689999999886322 1135
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEece
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 400 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~ 400 (438)
++|..++|+|+|||+|+|++|+++++++|++.++..+.+.+ ..+.+||+++||+....
T Consensus 83 ~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~n~~a~~~y~k~GF~~~~~ 141 (147)
T PTZ00330 83 GHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKLGFRACER 141 (147)
T ss_pred EEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecChHHHHHHHHCCCEEece
Confidence 78999999999999999999999999999999999888877 57999999999998764
|
|
| >PRK06635 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-14 Score=150.11 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=100.4
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcC-cccCCCCCeeec--
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC-- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~-i~~~~~g~~~ni-- 99 (438)
.|+++|.+ ++++++.|.++++..+. + .|++..++.+.|+.+++.|.|||+++ ++.+++|+++++
T Consensus 84 ~l~~~g~~----a~~l~~~~~~~~~~~~~--------~-~~~~~~~~~~~l~~~l~~~~ipVi~g~~~~~~~g~~~~l~r 150 (404)
T PRK06635 84 ALQSLGVK----ARSFTGWQAGIITDSAH--------G-KARITDIDPSRIREALDEGDVVVVAGFQGVDEDGEITTLGR 150 (404)
T ss_pred HHHhCCCC----eEEeChhhCCEEecCCC--------C-ceEeeecCHHHHHHHHhCCCEEEecCccEeCCCCCEEecCC
Confidence 67788875 99999999999987643 2 58899999999999999999999999 588999999999
Q ss_pred -ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 100 -NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 -naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
|+|.+|+.+|.+|+|++|+|+|||+|+. +++++|++++++|++++...|
T Consensus 151 g~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~l~~~g 207 (404)
T PRK06635 151 GGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLELASLG 207 (404)
T ss_pred CChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHHHHHcC
Confidence 9999999999999999999999999883 358999999999999986443
|
|
| >PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.9e-14 Score=153.47 Aligned_cols=136 Identities=29% Similarity=0.556 Sum_probs=114.3
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCC
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 357 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgq 357 (438)
++||+++.+|++.+.+++..........++..+.+......+++++.++++|||+.+... +...++|..++|+|+||||
T Consensus 464 m~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~Va~~~g~IVG~~~l~~~-~~~~~~I~~i~V~P~~rGk 542 (614)
T PRK12308 464 VKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAVAEHHGEVTGCASLYIY-DSGLAEIRSLGVEAGWQVQ 542 (614)
T ss_pred CEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHhcccCcEEEEEECCEEEEEEEEEEc-CCCeEEEEEEEECHHHcCC
Confidence 679999999999999998776554444556677777777788999999999999998753 3456899999999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEeceeccchHhhhhhcCCC
Q 013702 358 GQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSR 415 (438)
Q Consensus 358 GiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r 415 (438)
|||++||++++++|++.|++.+++.+ .+..||+|+||+.++...+|......-+.++
T Consensus 543 GIGk~Ll~~l~~~ak~~g~~~i~l~~-~a~~FYek~GF~~~~~~~~~~~~~~~~~~~~ 599 (614)
T PRK12308 543 GQGSALVQYLVEKARQMAIKKVFVLT-RVPEFFMKQGFSPTSKSLLPEKVLKDCDQCP 599 (614)
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEee-CcHHHHHHCCCEECCcccCChHHHHhhccCC
Confidence 99999999999999999999998876 3579999999999999988876665555443
|
|
| >TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-14 Score=147.88 Aligned_cols=113 Identities=19% Similarity=0.240 Sum_probs=100.5
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCH-HHHHHHhcCCceEEEcC-cccCCCCCeeec-
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDV-TRMRERLDGGCLVILSN-LGYSSSGEVLNC- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~-~~i~~ll~~g~IPVi~~-i~~~~~g~~~ni- 99 (438)
.|+++|.+ |+++++.+.++++..+.+ .+++..+++ +.|..+++.|.|||+++ ++.+.+|+.+++
T Consensus 84 ~l~~~g~~----a~~l~~~~~~~~t~~~~~---------~~~~~~~~~~~~l~~~l~~~~vpVi~g~~~~~~~g~~~~lg 150 (401)
T TIGR00656 84 ALRDLGVK----AIWLDGGEAGIITDDNFG---------NAKIDIIATEERLLPLLEEGIIVVVAGFQGATEKGYTTTLG 150 (401)
T ss_pred HHHhCCCc----eEEeccccceEEeCCCCC---------ceEeeecchHHHHHHHHhCCCEEEecCcceeCCCCCEeecC
Confidence 77888876 999999999999976532 477888998 99999999999999999 588889999998
Q ss_pred --ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 100 --NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 --naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
++|.+|+.+|.+|+|++|+|+|||+|+. +++++|++|+.+|+.+++..|
T Consensus 151 rg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~~G 208 (401)
T TIGR00656 151 RGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELATFG 208 (401)
T ss_pred CCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHHcC
Confidence 6999999999999999999999999883 367899999999999997654
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases. |
| >TIGR01027 proB glutamate 5-kinase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-14 Score=147.92 Aligned_cols=131 Identities=19% Similarity=0.246 Sum_probs=99.3
Q ss_pred HHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHH-HHH
Q 013702 71 TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ-EAD 142 (438)
Q Consensus 71 ~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~-e~~ 142 (438)
..|..||+.|.|||+++.+.....++-..|+|++|+.+|.+|+||+|+|+|||+|++ |++++|++++.. +..
T Consensus 115 ~~i~~Ll~~g~iPVi~end~v~~~~l~~gd~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~ 194 (363)
T TIGR01027 115 NTLEALLELGVVPIINENDTVATEEIKFGDNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLL 194 (363)
T ss_pred HHHHHHHhCCCEEEEeCCCceeeeecCcCChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHH
Confidence 889999999999999864332223344569999999999999999999999999873 246899999753 222
Q ss_pred HHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccch
Q 013702 143 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 222 (438)
Q Consensus 143 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~ 222 (438)
..+..+. ++++++| |
T Consensus 195 ~~i~~~~-------------------------------------------------~~~~gtG-G--------------- 209 (363)
T TIGR01027 195 LGVAGDS-------------------------------------------------GSSVGTG-G--------------- 209 (363)
T ss_pred HHhhcCC-------------------------------------------------CcCcCcC-C---------------
Confidence 2222111 1112233 3
Q ss_pred hhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 223 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
|.+||.+|..|.+.|++ ++|++++.|+. +.+++.++..||.|.+
T Consensus 210 ------M~~Kl~Aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~ 253 (363)
T TIGR01027 210 ------MRTKLQAADLATRAGVP-VIIASGSKPEK-IADALEGAPVGTLFHA 253 (363)
T ss_pred ------chHHHHHHHHHHHCCCe-EEEEeCCCccH-HHHHhcCCCCcEEEee
Confidence 99999999999999997 99999998874 5677778888999975
|
Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family. |
| >PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.1e-14 Score=120.96 Aligned_cols=119 Identities=22% Similarity=0.378 Sum_probs=90.4
Q ss_pred EEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHh--hcCcEEEEEECCEEEEEEEEeeec------CCCeEEEEEEEE
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK--ALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGV 350 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~--~~~~~~V~~~dg~iVG~~~l~~~~------~~~~~~I~~v~V 350 (438)
.||+++++|++++.+|++..+.......+....... ....+++++++++|||++.+.+.. .-..+.+..++|
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v 80 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLYGPGRCVVAEDDGKIVGHVGLIPRRLSVGGKKFKAAYIGDVAV 80 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHTTEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhcccCcCcEEEEEECCEEEEEEEEEEEEEEECCEEEEEEEEEEEEE
Confidence 489999999999999998877654432211111111 125789999999999999988641 124688999999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEe
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFREC 398 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~ 398 (438)
+|+|||||++++|++.+++.+++.|+..+++.. ....||+++||+.+
T Consensus 81 ~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 81 DPEYRGRGLGRQLMRALLERARERGVPFIFLFP-SSPPFYRRFGFEYA 127 (127)
T ss_dssp -GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE--SSHHHHHHTTEEEE
T ss_pred CHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec-CChhhhhcCCCEEC
Confidence 999999999999999999999999999888876 45799999999864
|
... |
| >PRK03624 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-13 Score=119.12 Aligned_cols=121 Identities=18% Similarity=0.249 Sum_probs=94.1
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCC--HHHHHhhc----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRT--DEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 350 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~--~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V 350 (438)
.+.||+++.+|++.+.+++... ....++. ...+.... ..++++..++++||++.+.. ......+..++|
T Consensus 2 ~~~ir~~~~~d~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~--~~~~~~i~~i~v 76 (140)
T PRK03624 2 AMEIRVFRQADFEAVIALWERC---DLTRPWNDPEMDIERKLNHDPSLFLVAEVGGEVVGTVMGGY--DGHRGWAYYLAV 76 (140)
T ss_pred ceEEEEcccccHHHHHHHHHhc---CCCcchhhHHHHHHHHhcCCCceEEEEEcCCcEEEEEEeec--cCCCceEEEEEE
Confidence 3679999999999999998765 1112221 11222222 35778888999999998762 234467888999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
+|+|||+|+|++|++.+++++++.+++.+.+.+ ..+.+||+|+||+..+...
T Consensus 77 ~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~y~k~GF~~~~~~~ 132 (140)
T PRK03624 77 HPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEQDRIS 132 (140)
T ss_pred CHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccccEEe
Confidence 999999999999999999999999999998877 4799999999999876543
|
|
| >TIGR00657 asp_kinases aspartate kinase | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.7e-14 Score=148.07 Aligned_cols=114 Identities=17% Similarity=0.166 Sum_probs=99.7
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcC-cccCCCCCeeec--
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNC-- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~-i~~~~~g~~~ni-- 99 (438)
.|+++|++ |+++++.+.+++++... +....+..++++.|..+++.|.|||+++ ++.+.+|++.++
T Consensus 123 ~l~~~Gi~----a~~l~~~~~~l~t~~~~--------~~~~~~~~~~~~~l~~~l~~~~vpVv~G~~g~~~~g~~~~lgr 190 (441)
T TIGR00657 123 ALEELGVK----AVSLLGGEAGILTDSNF--------GRARVIIEILTERLEPLLEEGIIPVVAGFQGATEKGETTTLGR 190 (441)
T ss_pred HHHhCCCC----CEEEEcCcceEEecCCC--------CceeecHhhhHHHHHHHHhcCCEEEEeCcEeeCCCCCEeecCC
Confidence 78888876 99999999999997653 2223578899999999999999999999 488899999888
Q ss_pred -ChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCcccccCCHHHHHHHHHhh
Q 013702 100 -NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 -naD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~i~~l~~~e~~~l~~~g 148 (438)
|+|.+|+.+|.+|+|++|+++|||+|+. | +++++++++.+|+.+++..|
T Consensus 191 ggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~~DP~~~~~a~~i~~is~~ea~el~~~G 247 (441)
T TIGR00657 191 GGSDYTAALLAAALKADECEIYTDVDGIYTTDPRIVPDARRIDEISYEEMLELASFG 247 (441)
T ss_pred CchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCCeECCccCHHHHHHHHhcC
Confidence 7999999999999999999999999884 3 58999999999999997554
|
The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.4e-14 Score=155.81 Aligned_cols=142 Identities=20% Similarity=0.170 Sum_probs=108.5
Q ss_pred eeCHHHHHHHhcCCceEEEcCcccCCC-------CCeeecChHHHHHHHHHHcCCCEEEEEecCcccc------CCCccc
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGYSSS-------GEVLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLI 133 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~~~~-------g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~------~~~~~i 133 (438)
....+.|+.||+.|.|||+++.+.... +...|+|+|++|+.||.+|+||+|+|+|||+|++ +++++|
T Consensus 136 ~~~~~~l~~ll~~g~iPVv~~nd~v~~~~~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i 215 (718)
T PLN02418 136 KQLSETVESLLDLRVIPIFNENDAVSTRRAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLI 215 (718)
T ss_pred HhHHHHHHHHHHCCCEEEEcCCCCccccccccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEc
Confidence 445789999999999999998533221 2337889999999999999999999999999884 246888
Q ss_pred ccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccc
Q 013702 134 RFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQ 213 (438)
Q Consensus 134 ~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 213 (438)
++++..+.+..+..+. .+...+| |
T Consensus 216 ~~i~~~~~~~~i~~~~-------------------------------------------------~s~~~tG-G------ 239 (718)
T PLN02418 216 HTYIKEKHQDEITFGE-------------------------------------------------KSRVGRG-G------ 239 (718)
T ss_pred ceecccchhhhhhccc-------------------------------------------------ccccCCC-C------
Confidence 8887655444332221 0111234 4
Q ss_pred cccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCCceeEEEE
Q 013702 214 GFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRT 282 (438)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~ 282 (438)
|.+||++|..|.++|++ ++|++|+.++. +.+++.++..||.|..+..+ +.+
T Consensus 240 ---------------M~~Kl~Aa~~a~~~Gi~-v~I~~g~~~~~-l~~~l~g~~~GT~i~~~~~~-~~~ 290 (718)
T PLN02418 240 ---------------MTAKVKAAVNAASAGIP-VVITSGYALDN-IRKVLRGERVGTLFHQDAHL-WAP 290 (718)
T ss_pred ---------------cHHHHHHHHHHHHCCCc-EEEeCCCCcch-HHHHhcCCCCceEeccccch-hhh
Confidence 99999999999999997 89999999985 56778888899999886554 444
|
|
| >PRK08841 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.7e-14 Score=144.01 Aligned_cols=113 Identities=18% Similarity=0.321 Sum_probs=99.7
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeec--
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni-- 99 (438)
.|+++|.+ |.++++.+.++++.... ..++|..++++.|+.+++.|.|||++++ +.+++|++.++
T Consensus 84 ~L~~~Gi~----a~~l~~~~~~i~t~~~~---------~~~~i~~~~~~~i~~ll~~~~vpVv~Gf~g~~~~g~~ttlgr 150 (392)
T PRK08841 84 TLNKLGYA----ARSLTGAQANIVTDNQH---------NDATIKHIDTSTITELLEQDQIVIVAGFQGRNENGDITTLGR 150 (392)
T ss_pred HHHhCCCC----eEEEehhHcCEEecCCC---------CCceechhhHHHHHHHHhCCCEEEEeCCcccCCCCCEEEeCC
Confidence 67788875 99999999988885432 1588989999999999999999999996 88999999999
Q ss_pred -ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHhh
Q 013702 100 -NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 -naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~g 148 (438)
++|.+|+.+|.+|+|+.|+++|||+|+ | +++++|++|+++|+.++...|
T Consensus 151 ggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~ela~~G 207 (392)
T PRK08841 151 GGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEAMARKG 207 (392)
T ss_pred CChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHHHHhcC
Confidence 999999999999999999999999987 3 358999999999999997554
|
|
| >COG1608 Predicted archaeal kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.6e-14 Score=133.50 Aligned_cols=139 Identities=14% Similarity=0.217 Sum_probs=108.9
Q ss_pred eeeEeeeCHHHHHHHhcCCceEEEcC-cccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCc-ccccCCH
Q 013702 62 TGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGH-LIRFLTL 138 (438)
Q Consensus 62 vG~v~~v~~~~i~~ll~~g~IPVi~~-i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~-~i~~l~~ 138 (438)
-|++..-..+.|..+|+.|+|||+.. +..+.+..+..+++|+++..||+.|+||+++|+|||||+. .++. .++....
T Consensus 109 ~gr~~~~~l~~i~~~l~~gfvPvl~GDVv~d~~~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l 188 (252)
T COG1608 109 NGRILYTYLEAIKDALEKGFVPVLYGDVVPDDDNGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLL 188 (252)
T ss_pred CCceeechHHHHHHHHHcCCEeeeecceEEcCCCceEEEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccch
Confidence 57777777999999999999999976 4666666889999999999999999999999999999874 4444 4444445
Q ss_pred HHHHHHHHhh-hhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccc
Q 013702 139 QEADSLIRQR-VKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAI 217 (438)
Q Consensus 139 ~e~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~ 217 (438)
.+++.+..-+ +...|+ || |
T Consensus 189 ~~i~~~~~~~gs~~~DV-------------------------------------------------TG-G---------- 208 (252)
T COG1608 189 SEIEGRVALGGSGGTDV-------------------------------------------------TG-G---------- 208 (252)
T ss_pred hhhhhhhhhcCcCcccc-------------------------------------------------hh-h----------
Confidence 5666654322 111222 44 4
Q ss_pred cccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 218 GGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|..||+++....++|.. |+++||+.+++| ..++.++..||.|.
T Consensus 209 -----------i~~Kl~~~~~~~~~~~~-vyi~ng~~~~ni-~~~l~G~~vGT~I~ 251 (252)
T COG1608 209 -----------IAKKLEALLEIARYGKE-VYIFNGNKPENI-YRALRGENVGTRID 251 (252)
T ss_pred -----------HHHHHHHHHHHHhcCce-EEEECCCCHHHH-HHHhcCCCCceEec
Confidence 99999999999999988 999999999976 55666778899985
|
|
| >cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.7e-14 Score=141.39 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=96.5
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeec--
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni-- 99 (438)
.|+++|++ |++|++.|.++++....+ +. ...++....++... ..+++.+.|||++++ +.+.+|++.++
T Consensus 136 ~L~~~Gi~----a~~l~~~~~~i~t~~~~~--~a--~~~~~~~~~i~~~l-~~ll~~~~vpVv~Gfig~~~~g~~ttlgR 206 (298)
T cd04244 136 ALRSLGIK----ARALDGGEAGIITDDNFG--NA--RPLPATYERVRKRL-LPMLEDGKIPVVTGFIGATEDGAITTLGR 206 (298)
T ss_pred HHHhCCCC----eEEEcHHHcceeecCccc--cc--ccchhHHHHHHHHH-HHHhhcCCEEEEeCccccCCCCCEEEecC
Confidence 77888876 999999999999977542 11 11145555666554 578899999999995 88999999999
Q ss_pred -ChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCcccccCCHHHHHHHHHhh
Q 013702 100 -NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 -naD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~i~~l~~~e~~~l~~~g 148 (438)
++|.+|+.+|.+|+|++++|+|||+|+. | ++++|++|+++|+.++...|
T Consensus 207 ggsD~~A~~~A~~l~a~~l~i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~el~~~G 263 (298)
T cd04244 207 GGSDYSATIIGAALDADEIWIWKDVDGVMTADPRIVPEARTIPRLSYAEAMELAYFG 263 (298)
T ss_pred CChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcCccCHHHHHHHHhCC
Confidence 9999999999999999999999999883 3 58999999999999997554
|
The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. |
| >TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.3e-13 Score=132.89 Aligned_cols=124 Identities=20% Similarity=0.206 Sum_probs=99.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcC-CHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~-~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p 352 (438)
.+.||+++++|++.+.+|+...+... ..+. ..+.+...+ ..+++++.++++||++.+........++|..++|+|
T Consensus 115 ~~~IR~a~~~D~~~l~~L~~~v~~~~-~~~~~~~~~l~~~~~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~eI~~i~V~P 193 (266)
T TIGR03827 115 GFTLRIATEDDADAMAALYRKVFPTY-PFPIHDPAYLLETMKSNVVYFGVEDGGKIIALASAEMDPENGNAEMTDFATLP 193 (266)
T ss_pred ceEEEECCHHHHHHHHHHHHHHhccC-CCCccCHHHHHHHhcCCcEEEEEEECCEEEEEEEEecCCCCCcEEEEEEEECH
Confidence 46799999999999999998866432 2222 223233322 346788889999999987544455678999999999
Q ss_pred cccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 353 ~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+|||+|+|++||+.+++++++.|++.+++.+ ..+..+|+|+||+.++..
T Consensus 194 ~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~ly~k~GF~~~G~l 246 (266)
T TIGR03827 194 EYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNITFARLGYAYGGTL 246 (266)
T ss_pred HHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHHHHHcCCccccEE
Confidence 9999999999999999999999999998877 467899999999998864
|
Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.1e-14 Score=154.59 Aligned_cols=137 Identities=19% Similarity=0.198 Sum_probs=104.7
Q ss_pred CHHHHHHHhcCCceEEEcCcccCCC-------CCeeecChHHHHHHHHHHcCCCEEEEEecCcccc------CCCccccc
Q 013702 69 DVTRMRERLDGGCLVILSNLGYSSS-------GEVLNCNTYEVATACALAIEADKLICIIDGPILD------ESGHLIRF 135 (438)
Q Consensus 69 ~~~~i~~ll~~g~IPVi~~i~~~~~-------g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~------~~~~~i~~ 135 (438)
..+.|+.||+.|.|||+++.+...+ ++-+|+|+|++|+.||.+|+||+|+|+|||+|++ +++++|++
T Consensus 130 ~~~~l~~lL~~g~iPVin~nD~V~~~~~~~~~~~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~ 209 (715)
T TIGR01092 130 LNETVHELLRMNVVPVVNENDAVSTRAAPYSDSQGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDT 209 (715)
T ss_pred HHHHHHHHHHCCCEEEEcCCCcccccccccccccceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeee
Confidence 4779999999999999987432211 1235999999999999999999999999999884 34889999
Q ss_pred CCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccc
Q 013702 136 LTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGF 215 (438)
Q Consensus 136 l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~ 215 (438)
++..+.+..+..+. .+...+| |
T Consensus 210 i~~~~~~~~i~~~~-------------------------------------------------~~~~~tG-G-------- 231 (715)
T TIGR01092 210 FYKEKHQGEITFGT-------------------------------------------------KSRLGRG-G-------- 231 (715)
T ss_pred ecccchhhhhccCc-------------------------------------------------ccccCCC-C--------
Confidence 98655442222211 1111233 3
Q ss_pred cccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCCcee
Q 013702 216 AIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 278 (438)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~ 278 (438)
|.+||++|..|.+.|++ ++|++++.++. +..++.++..||.|..+..|
T Consensus 232 -------------M~~Kl~aa~~a~~~gi~-v~I~~g~~~~~-l~~~l~g~~~GT~~~~~~~~ 279 (715)
T TIGR01092 232 -------------MTAKVKAAVWAAYGGTP-VIIASGTAPKN-ITKVVEGKKVGTLFHEDAHL 279 (715)
T ss_pred -------------chHHHHHHHHHHHCCCe-EEEeCCCCcch-HHHHhcCCCCceEecccchh
Confidence 99999999999999997 99999998886 56777778889999876544
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >PRK07431 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-13 Score=147.06 Aligned_cols=113 Identities=20% Similarity=0.279 Sum_probs=97.8
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccC--CCCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYS--SSGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~--~~g~~~ni 99 (438)
.|+++|.+ |+++++.|.+++++... | .|++..++++.|..+++.|.|||++++ |.+ ..|++.++
T Consensus 84 ~l~~~gi~----a~~l~~~~~~~~~~~~~--------~-~~~i~~~~~~~l~~~l~~g~vpVv~g~~g~~~~~~g~~~~l 150 (587)
T PRK07431 84 ALHELGQP----AISLTGAQVGIVTESEH--------G-RARILEIKTDRIQRHLDAGKVVVVAGFQGISLSSNLEITTL 150 (587)
T ss_pred HHHHCCCC----eEEechhHcCeEecCCC--------C-ceeeeeccHHHHHHHHhCCCeEEecCCcCCCCCCCCCEeec
Confidence 57788876 99999999999986643 2 489999999999999999999999986 554 44888887
Q ss_pred ---ChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCcccccCCHHHHHHHHHhh
Q 013702 100 ---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 ---naD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~i~~l~~~e~~~l~~~g 148 (438)
++|.+|+.||.+|+|++|+|+|||+|++ | ++++|++++.+|+.+++..|
T Consensus 151 grggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~el~~~G 209 (587)
T PRK07431 151 GRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLELASLG 209 (587)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHHHHhCC
Confidence 8999999999999999999999999884 3 58999999999999997554
|
|
| >KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=9e-13 Score=114.73 Aligned_cols=124 Identities=21% Similarity=0.294 Sum_probs=100.9
Q ss_pred eeEEEECCccCHHHHHHHHHHHH---HcCcCCcCCHHHHHhh--c----CcEEEEEE---CCEEEEEEEEeeecC----C
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLV---ESGALVRRTDEELLKA--L----DSFYVVER---EGQIIACAALFPFFK----E 340 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~---~~~~~~~~~~e~l~~~--~----~~~~V~~~---dg~iVG~~~l~~~~~----~ 340 (438)
.+.||.++++|.+.+.+|++++. ....+...+.+.+... + .+++++.. ++.++||+.+++..+ .
T Consensus 3 ~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k 82 (163)
T KOG3216|consen 3 NIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGK 82 (163)
T ss_pred ceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeeccccccccc
Confidence 46899999999999999998853 3334455566666664 2 34555544 789999999886433 3
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
...+|..+||.|+|||+|+|++|++.+-+.|.+.|+.++...+ .+|+.||++.|++....
T Consensus 83 ~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 83 QGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred ceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHHHHHhCccccce
Confidence 6779999999999999999999999999999999999999888 58999999999997644
|
|
| >PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.9e-13 Score=116.01 Aligned_cols=118 Identities=20% Similarity=0.271 Sum_probs=93.3
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC-c--EEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccc
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD-S--FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 354 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~-~--~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~y 354 (438)
++||+++.+|++.+.++.... ...++..+.+..... . .+.+..++++||++.+.... +..++..++|+|+|
T Consensus 2 ~~iR~~~~~D~~~l~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~--~~~~~~~i~v~~~~ 75 (146)
T PRK09491 2 NTISSLTPADLPAAYHIEQRA----HAFPWSEKTFASNQGERYLNLKLTVNGQMAAFAITQVVL--DEATLFNIAVDPDY 75 (146)
T ss_pred cchhcCChhhhHHHHHHHHhc----CCCCCCHHHHHHHHhcCceEEEEEECCeEEEEEEEEeec--CceEEEEEEECHHH
Confidence 579999999999999986432 223455555543322 2 23456789999999887533 34678889999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 355 RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
||+|+|+.|++.+++.+++.++..+.+.+ ..+.+||+|+||+..+..
T Consensus 76 rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~~~~~~ 126 (146)
T PRK09491 76 QRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEVTIR 126 (146)
T ss_pred ccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCEEeeee
Confidence 99999999999999999999999998876 579999999999987743
|
|
| >PRK10140 putative acetyltransferase YhhY; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-12 Score=115.87 Aligned_cols=123 Identities=16% Similarity=0.167 Sum_probs=92.9
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcC---cCCcCCHHHHHhhc-----CcEEEEEECCEEEEEEEEeeecC---CCeEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFK---EKCGEVA 346 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~---~~~~~~~e~l~~~~-----~~~~V~~~dg~iVG~~~l~~~~~---~~~~~I~ 346 (438)
+.||+++.+|++.+.+++....... .....+.+.+...+ ..++++..++++||++.+..... ...+++
T Consensus 4 i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~- 82 (162)
T PRK10140 4 IVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADF- 82 (162)
T ss_pred cEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEecccccccceEEEE-
Confidence 6799999999999999986532111 11223444444433 23577788999999999874322 223454
Q ss_pred EEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 347 AIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 347 ~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.++|+|+|||+|+|++|++.+++++++ .++..+.+.+ .++.+||+|+||+..+..
T Consensus 83 ~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 142 (162)
T PRK10140 83 GICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTG 142 (162)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHHCCCEEEeec
Confidence 599999999999999999999999987 6888887766 589999999999998763
|
|
| >PLN02706 glucosamine 6-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.47 E-value=7.4e-13 Score=117.26 Aligned_cols=122 Identities=25% Similarity=0.379 Sum_probs=91.6
Q ss_pred ceeEEEECCccCHH-HHHHHHHHHHHcCcCCcCCHHHHHhhc--------C-cEEEEEE--CCEEEEEEEEeeec-----
Q 013702 276 LYEGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL--------D-SFYVVER--EGQIIACAALFPFF----- 338 (438)
Q Consensus 276 ~~~~IR~at~~D~~-~I~~L~~~~~~~~~~~~~~~e~l~~~~--------~-~~~V~~~--dg~iVG~~~l~~~~----- 338 (438)
+.+.||+++.+|.+ .+.+++...... .+++.+.+.+.+ . .++++.. ++++||++.+....
T Consensus 5 ~~~~ir~~~~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~ 81 (150)
T PLN02706 5 EKFKVRRLEISDKSKGFLELLQQLTVV---GDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRN 81 (150)
T ss_pred CceEEeEhhhcccchHHHHHHHhccCC---CCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccC
Confidence 34679999999998 588887664322 244544544432 1 2445555 58999999874221
Q ss_pred CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEece
Q 013702 339 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 400 (438)
Q Consensus 339 ~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~ 400 (438)
....++|..++|+|+|||||||++|++.++++|++.|++++.+.+ .....||+|+||+..+.
T Consensus 82 ~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~~y~k~GF~~~g~ 144 (150)
T PLN02706 82 CGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKAFYEKCGYVRKEI 144 (150)
T ss_pred CCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHHHHHHCcCEEehh
Confidence 124567888999999999999999999999999999999999988 34468999999998764
|
|
| >PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.3e-12 Score=110.12 Aligned_cols=103 Identities=31% Similarity=0.495 Sum_probs=81.9
Q ss_pred CHHHHHHHHHHHHHcCcCC---------cCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcc
Q 013702 287 DLSGIKQIIQPLVESGALV---------RRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 353 (438)
Q Consensus 287 D~~~I~~L~~~~~~~~~~~---------~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~ 353 (438)
|+++|.+|+.......... ..+.+.+...+ ..+++++.++++|||+.+. ...+|..++|+|+
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~-----~~~~i~~l~v~p~ 75 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE-----PDGEISHLYVLPE 75 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE-----TCEEEEEEEE-GG
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc-----CCCeEEEEEEChh
Confidence 7899999998866553321 13455555554 3589999999999999986 2344999999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCC
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGF 395 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF 395 (438)
|||+|+|++|++.+++++++ +++.+.+.. ..+.+||+++||
T Consensus 76 ~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 76 YRGRGIGRALLDAAEKEAKD-GIRRLTVEANERARRFYRKLGF 117 (117)
T ss_dssp GTTSSHHHHHHHHHHHHHTT-TCEEEEEEC-HHHHHHHHHTT-
T ss_pred hcCCcHHHHHHHHHHHHHHc-CCcEEEEEeCHHHHHHHHhCCC
Confidence 99999999999999999977 999888877 578999999998
|
|
| >TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.2e-13 Score=122.45 Aligned_cols=124 Identities=18% Similarity=0.209 Sum_probs=94.3
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcC-cCCcCC-HH---H-HHh----hc----Cc-EE-EEEECCEEEEEEEEeeecCC
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESG-ALVRRT-DE---E-LLK----AL----DS-FY-VVEREGQIIACAALFPFFKE 340 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~-~~~~~~-~e---~-l~~----~~----~~-~~-V~~~dg~iVG~~~l~~~~~~ 340 (438)
.+.||+++.+|.+.+.+++...+... +..++. .+ . +.. .. .. .+ +...+++++|++.+.... .
T Consensus 43 ~~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~-~ 121 (191)
T TIGR02382 43 DPGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELN-D 121 (191)
T ss_pred CCcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecC-C
Confidence 35799999999999999998874321 221221 11 1 111 11 12 23 345578999999987543 3
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
..+++..++|+|+|||||+|++|++.++++|+++|+..+.+.+ ..+.+||+|+||+..+..
T Consensus 122 ~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~~~~~~ 186 (191)
T TIGR02382 122 TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGANIESTA 186 (191)
T ss_pred CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCccccce
Confidence 5678999999999999999999999999999999999999987 579999999999987654
|
This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583). |
| >PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2 | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.1e-13 Score=104.59 Aligned_cols=75 Identities=32% Similarity=0.524 Sum_probs=69.2
Q ss_pred EEECCEEEEEEEEeeecCC----CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHC
Q 013702 322 VEREGQIIACAALFPFFKE----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSR 393 (438)
Q Consensus 322 ~~~dg~iVG~~~l~~~~~~----~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~ 393 (438)
+++++++||++.+.+.... +.++|..++|+|+|||+|+|+.|++++++++++.|++.+.+.+ ..+.+||+|+
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~ 80 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKL 80 (83)
T ss_dssp EEETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHT
T ss_pred CcCCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHc
Confidence 4789999999999876554 7999999999999999999999999999999999999999988 5789999999
Q ss_pred CCe
Q 013702 394 GFR 396 (438)
Q Consensus 394 GF~ 396 (438)
||+
T Consensus 81 Gf~ 83 (83)
T PF00583_consen 81 GFE 83 (83)
T ss_dssp TEE
T ss_pred CCC
Confidence 996
|
3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A .... |
| >COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.9e-13 Score=129.13 Aligned_cols=129 Identities=17% Similarity=0.185 Sum_probs=103.5
Q ss_pred eeeCHHHHHHHhcCCceEEEcC-----cccCCC---CCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-----CCCcc
Q 013702 66 KKVDVTRMRERLDGGCLVILSN-----LGYSSS---GEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHL 132 (438)
Q Consensus 66 ~~v~~~~i~~ll~~g~IPVi~~-----i~~~~~---g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-----~~~~~ 132 (438)
.-++.+.|+.|+++|.++|.++ +..+.. |---.||.|.+++.||..++||.|++||||+.+. |+.+.
T Consensus 170 ~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liILTdVd~Vy~n~gkp~q~~ 249 (312)
T COG0549 170 RIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLIILTDVDAVYVNFGKPNQQA 249 (312)
T ss_pred cchhHHHHHHHHhCCCEEEEeCCCCcceEecCCCcceeeEEEccHHHHHHHHHHhcCCEEEEEeccchheecCCCccchh
Confidence 3568999999999999999873 333333 4455789999999999999999999999999652 67899
Q ss_pred cccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccc
Q 013702 133 IRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 212 (438)
Q Consensus 133 i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 212 (438)
|++++++|+++|++++
T Consensus 250 L~~v~~~e~~~yl~eg---------------------------------------------------------------- 265 (312)
T COG0549 250 LDRVTVDEMEKYLAEG---------------------------------------------------------------- 265 (312)
T ss_pred hcccCHHHHHHHHhcC----------------------------------------------------------------
Confidence 9999999999998775
Q ss_pred ccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 213 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
+||+|| |.|||+||+..++++-+++.|.+-. . +.+.+. ...||.|.
T Consensus 266 -~Fa~GS---------M~PKVeAai~Fv~~~gk~A~ItsLe---~-~~~~l~-g~~GT~I~ 311 (312)
T COG0549 266 -QFAAGS---------MGPKVEAAISFVENTGKPAIITSLE---N-AEAALE-GKAGTVIV 311 (312)
T ss_pred -CCCCCC---------ccHHHHHHHHHHHcCCCceEECcHH---H-HHHHhc-cCCCcEec
Confidence 377778 9999999999999998888777522 1 234443 34589875
|
|
| >PHA00673 acetyltransferase domain containing protein | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.3e-12 Score=116.23 Aligned_cols=119 Identities=23% Similarity=0.245 Sum_probs=91.2
Q ss_pred ECCccCHHHHHHHHHHHHHc---CcC-CcCC----HHHHHhhc-CcEEEEEECCEEEEEEEEeeec-----CCCeEEEEE
Q 013702 282 TAKVTDLSGIKQIIQPLVES---GAL-VRRT----DEELLKAL-DSFYVVEREGQIIACAALFPFF-----KEKCGEVAA 347 (438)
Q Consensus 282 ~at~~D~~~I~~L~~~~~~~---~~~-~~~~----~e~l~~~~-~~~~V~~~dg~iVG~~~l~~~~-----~~~~~~I~~ 347 (438)
-++.+|+|.|.+|+.+..-. ... .+.+ .+.+.+.- ..+++++++|++|||+.+...+ ....+.|..
T Consensus 11 ~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~af~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~~~~~~~~~Ie~ 90 (154)
T PHA00673 11 FAELADAPTFASLCAEYAHESANADLAGRAPDHHAYAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTES 90 (154)
T ss_pred hccHhhHHHHHHHHHhcccccccccccccchhHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCccCCccEEEEEE
Confidence 47899999999998772111 111 1111 12222222 4577888899999999876433 235678999
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcH---HHHHHHHHCCCeEece
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT---RTADWFKSRGFRECSI 400 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~---~a~~fY~k~GF~~~g~ 400 (438)
++|+|++||+|||++|+++++++|+++||..+++..+ .+..||.++|+++...
T Consensus 91 l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv~fy~~~g~~~~~~ 146 (154)
T PHA00673 91 IFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQLLPAAGYRETNR 146 (154)
T ss_pred EEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccchHHHHhCCchhhch
Confidence 9999999999999999999999999999999999884 6799999999998654
|
|
| >cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.3e-13 Score=127.59 Aligned_cols=74 Identities=16% Similarity=0.203 Sum_probs=65.6
Q ss_pred CHHHHHHHhcCCceEEEcCccc----CCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCHHHHH
Q 013702 69 DVTRMRERLDGGCLVILSNLGY----SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEAD 142 (438)
Q Consensus 69 ~~~~i~~ll~~g~IPVi~~i~~----~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~~e~~ 142 (438)
+...+..++..|.|||+.|.+. +..++.+|+|+|++|+.+|.+|+|++|+++|||+|++ .++++|++++.+++.
T Consensus 80 ~~~~~~~~~~~g~ipV~~P~~~~~~~~~~~~~~~~ttD~lAa~lA~~l~A~~Li~ltdVdGVy~~da~~i~~i~~~e~~ 158 (203)
T cd04240 80 TLAELTDVLERGKIAILLPYRLLLDTDPLPHSWEVTSDSIAAWLAKKLGAKRLVIVTDVDGIYEKDGKLVNEIAAAELL 158 (203)
T ss_pred CHHHHHHHHHCCCcEEEeCchhhcccCCCCcccccCHHHHHHHHHHHcCCCEEEEEeCCccccCCCCcCccccCHHHhC
Confidence 3578899999999999999976 5668889999999999999999999999999999985 569999999987653
|
Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily. |
| >cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.1e-13 Score=131.38 Aligned_cols=80 Identities=21% Similarity=0.143 Sum_probs=67.8
Q ss_pred EeeeCHHHHHHHhcCCceEEEcCccc-------CCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCC
Q 013702 65 VKKVDVTRMRERLDGGCLVILSNLGY-------SSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESG 130 (438)
Q Consensus 65 v~~v~~~~i~~ll~~g~IPVi~~i~~-------~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~ 130 (438)
++..+.+.|+.+|+.|.|||+++... +..|+..++|+|++|+.+|.+|+|++|+++|||+|++ +++
T Consensus 120 i~~~~~~~l~~lL~~g~vPVi~g~~~~~~~~i~~~~g~~~~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a 199 (262)
T cd04255 120 VGHGDLLQLPTFLKAGRAPVISGMPPYGLWEHPAEEGRIPPHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKA 199 (262)
T ss_pred cccccHHHHHHHHHCCCeEEEeCCcCCCeeeecCCCccCCCCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCC
Confidence 55677889999999999999998731 2235678999999999999999999999999999873 358
Q ss_pred cccccCCHHHHHHH
Q 013702 131 HLIRFLTLQEADSL 144 (438)
Q Consensus 131 ~~i~~l~~~e~~~l 144 (438)
++|++++.+++.++
T Consensus 200 ~~i~~i~~~~~~~~ 213 (262)
T cd04255 200 EFIPEISAAELLKK 213 (262)
T ss_pred eEccEeCHHHHHHH
Confidence 99999998776665
|
The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK). |
| >PRK09831 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=116.31 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=87.2
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHH-----------hhc--CcEEEEEECCEEEEEEEEeeecCCCeEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL-----------KAL--DSFYVVEREGQIIACAALFPFFKEKCGE 344 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~-----------~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~ 344 (438)
+.||+++++|.+.+.+++.....+......+.+.+. ..+ ..++++..+++++|++.+.. .+
T Consensus 1 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~iiG~~~~~~------~~ 74 (147)
T PRK09831 1 IQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCIE------HY 74 (147)
T ss_pred CccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHhcCceEEEEECCEEEEEEEehh------ce
Confidence 368999999999999999876544332222322222 111 35788889999999998752 46
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEeceec
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~~ 402 (438)
+..++|+|+|||+|+|++||+++++.+.+. .+.. +..+.+||+|+||+..+...
T Consensus 75 i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~l---~v~~-~~~a~~~Y~k~Gf~~~g~~~ 128 (147)
T PRK09831 75 IDMLFVDPEYTRRGVASALLKPLIKSESEL---TVDA-SITAKPFFERYGFQTVKQQR 128 (147)
T ss_pred eeeEEECHHHcCCCHHHHHHHHHHHHhhhe---Eeec-chhhHHHHHHCCCEEeeccc
Confidence 788999999999999999999999998762 2222 25789999999999998754
|
|
| >TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-12 Score=117.82 Aligned_cols=120 Identities=19% Similarity=0.204 Sum_probs=89.6
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc-CcEEEEE-ECCEEEEEEEEeeec-CCCeEEEEEEEECccccC
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-DSFYVVE-REGQIIACAALFPFF-KEKCGEVAAIGVSPECRG 356 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~-~~~~V~~-~dg~iVG~~~l~~~~-~~~~~~I~~v~V~p~yRg 356 (438)
||+++.+|++.+.+|+................+.... ..+++++ .++++||++.+.... .....++..++|+|+|||
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~i~~l~V~p~~rg 80 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPDRPDVLFVWQVAVDPRARG 80 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCCCCCeEEEEEEEEChHhcc
Confidence 6899999999999998765321111111111121222 3456666 467999998765332 345688999999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEec
Q 013702 357 QGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 399 (438)
Q Consensus 357 qGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g 399 (438)
+|||++|++.+++++++.++..+.+.+ +.+++||+|+||+...
T Consensus 81 ~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ly~k~G~~~~~ 127 (157)
T TIGR02406 81 KGLARRLLEALLERVACERVRHLETTITPDNQASRALFKALARRRGV 127 (157)
T ss_pred CcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHHHHHhCcccCC
Confidence 999999999999999999999998877 5889999999998743
|
This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase. |
| >PRK06291 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-13 Score=140.87 Aligned_cols=114 Identities=17% Similarity=0.182 Sum_probs=93.3
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEeccc--ccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGV--VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~--~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni 99 (438)
.|+++|.+ |.++++.|.++++....+. ++..++++++ +.+..+++.|.|||++++ |.+.+|++.|+
T Consensus 140 ~L~~~Gi~----a~~l~~~~~~i~t~~~~~~~~~~~~~~~~~~-------~~~~~ll~~~~vpVv~Gfig~~~~g~~~tl 208 (465)
T PRK06291 140 ALRDLGIK----SVALTGGEAGIITDSNFGNARPLPKTYERVK-------ERLEPLLKEGVIPVVTGFIGETEEGIITTL 208 (465)
T ss_pred HHHhCCCC----eEEEchHHCcEEecCCCCceeechhhHHHHH-------HHHHHHhhcCcEEEEeCcEEcCCCCCEEEe
Confidence 67888875 9999999999999765431 0112223222 468889999999999995 88999999999
Q ss_pred ---ChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCcccccCCHHHHHHHHHh
Q 013702 100 ---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQ 147 (438)
Q Consensus 100 ---naD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~i~~l~~~e~~~l~~~ 147 (438)
++|.+|+.+|.+|+|++++++|||+|++ | ++++|++++.+|+.++...
T Consensus 209 grggsD~~A~~~A~~l~a~~~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~l~~~ 266 (465)
T PRK06291 209 GRGGSDYSAAIIGAALDADEIWIWTDVDGVMTTDPRIVPEARVIPKISYIEAMELSYF 266 (465)
T ss_pred cCCChHHHHHHHHHhcCCCEEEEEECCCCCCCCCCCCCCCCeEccccCHHHHHHHHhC
Confidence 9999999999999999999999999883 3 6899999999999998543
|
|
| >PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-12 Score=115.85 Aligned_cols=127 Identities=25% Similarity=0.293 Sum_probs=96.2
Q ss_pred EEECC-ccCHHHHHHHHHHHHHcCcC-CcCC---HHHHHhhc-----CcEEEEEECCEEEEEEEEeee-----cCCCeEE
Q 013702 280 TRTAK-VTDLSGIKQIIQPLVESGAL-VRRT---DEELLKAL-----DSFYVVEREGQIIACAALFPF-----FKEKCGE 344 (438)
Q Consensus 280 IR~at-~~D~~~I~~L~~~~~~~~~~-~~~~---~e~l~~~~-----~~~~V~~~dg~iVG~~~l~~~-----~~~~~~~ 344 (438)
||+++ .+|++.|.++++......+. ..++ .+.+...+ ...+|++.||+++|++.++.. ..+....
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~~~~~~~~~ 80 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDYDADDGDRG 80 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS---TTEEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccccCCCCEEE
Confidence 79999 99999999999876544333 2222 22333333 247899999999999988641 1346778
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEeceeccchH
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEE 406 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~ 406 (438)
++.++++|+|||+|+|+.+++.+++++.+. ++..+.+.+ .+++++|+|+||+.++..++|..
T Consensus 81 ~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k~GF~~~g~~~~~~~ 147 (152)
T PF13523_consen 81 IHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEKAGFRKVGEFEFPDK 147 (152)
T ss_dssp EEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHHTT-EEEEEEEESSE
T ss_pred EeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHHcCCEEeeEEECCCC
Confidence 888999999999999999999999999875 899999988 58999999999999999887753
|
|
| >PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.7e-12 Score=111.85 Aligned_cols=121 Identities=26% Similarity=0.422 Sum_probs=92.0
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcCCc----CCHHHHHhhc--------CcEEEEEE-CCEEEEEEEEeeecC-CCeEEE
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGALVR----RTDEELLKAL--------DSFYVVER-EGQIIACAALFPFFK-EKCGEV 345 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~~~----~~~e~l~~~~--------~~~~V~~~-dg~iVG~~~l~~~~~-~~~~~I 345 (438)
||+++++|++.|.++++......+... .+.+.+..++ ..++++.. +|++||++.+.+... ...+++
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~~~~~~ 80 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYNHTAEL 80 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGTTEEEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccCCEEEE
Confidence 799999999999999987543333321 2233333222 34666666 999999999986543 356666
Q ss_pred EEEEECccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 346 AAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 346 ~~v~V~p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.++|.|+||++|+|+.|++.++++| ++.|++.+++.+ ..+.+||+++||+..+..
T Consensus 81 -~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~~GF~~~g~~ 140 (155)
T PF13420_consen 81 -SIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKKLGFEEEGEL 140 (155)
T ss_dssp -EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHHTTEEEEEEE
T ss_pred -eeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHhCCCEEEEEE
Confidence 5888899999999999999999999 999999999877 589999999999999864
|
... |
| >KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.3e-13 Score=126.15 Aligned_cols=133 Identities=21% Similarity=0.227 Sum_probs=102.7
Q ss_pred HHHHHHHhcCCceEEEcCcccCCCCCeeecC---hHHHHHHHHHHcCCCEEEEEecCccccC---C---CcccccCCHHH
Q 013702 70 VTRMRERLDGGCLVILSNLGYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPILDE---S---GHLIRFLTLQE 140 (438)
Q Consensus 70 ~~~i~~ll~~g~IPVi~~i~~~~~g~~~nin---aD~~A~~lA~aL~A~~li~ltdv~g~~~---~---~~~i~~l~~~e 140 (438)
...|++||..|.|||++....-.--++.+-| +|.+|+.+|..++||.||+||||+|++. + .++|+..+..+
T Consensus 135 ~~Ti~eLL~m~viPIvNeNDavs~~~~~~~D~~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~ 214 (285)
T KOG1154|consen 135 QNTISELLSMNVIPIVNENDAVSPREIPFGDSSDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGD 214 (285)
T ss_pred HHHHHHHHhCCceeeecCCCccCCcccccCCCCcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCC
Confidence 5689999999999999987544344555665 9999999999999999999999999852 2 34455443211
Q ss_pred HHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccccccccc
Q 013702 141 ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQ 220 (438)
Q Consensus 141 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~ 220 (438)
- -..-+|+.++.+++| |
T Consensus 215 ~-------------------------------------------------~v~~tfG~~SkvGtG-G------------- 231 (285)
T KOG1154|consen 215 P-------------------------------------------------QVSTTFGSKSKVGTG-G------------- 231 (285)
T ss_pred C-------------------------------------------------CCccccCccCccCcC-c-------------
Confidence 0 012357778888888 6
Q ss_pred chhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCC
Q 013702 221 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 275 (438)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d 275 (438)
|.+||.||..|+..||. +.|++|..|.. +..++.+.-.||.+...
T Consensus 232 --------M~tKv~AA~~A~~~Gv~-viI~~g~~p~~-I~~iv~g~kvgt~f~~~ 276 (285)
T KOG1154|consen 232 --------METKVKAAVNALNAGVS-VIITNGDAPEN-ITDIVEGKKVGTFFEQL 276 (285)
T ss_pred --------chhhHHHHHHHhcCCce-EEEeCCCChHH-HHHHHhhhhhhhhhhhc
Confidence 99999999999999997 88999999986 46777777778887653
|
|
| >COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.1e-12 Score=113.58 Aligned_cols=145 Identities=26% Similarity=0.243 Sum_probs=110.0
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC----CcCCHHHHHhhc----C---cEEEEEEC-CEEEEEEEEeeecCC---Ce
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL----D---SFYVVERE-GQIIACAALFPFFKE---KC 342 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~~----~---~~~V~~~d-g~iVG~~~l~~~~~~---~~ 342 (438)
+.||+++..|++.|.++++........ .+.+.+.+.++. . .++|++.+ |+++|++.+.++... ..
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~~ 81 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYRH 81 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccce
Confidence 579999999999999999997765432 455777776655 1 45667655 899999999876543 22
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCce
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 418 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~ 418 (438)
..-..+||+|++||+|+|++|++.+++.++.+|++.+.... ..+.++++++||+.++...--. .....-.+.
T Consensus 82 tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF~~~G~~~~vg----~k~g~wld~ 157 (169)
T COG1247 82 TVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKLGFEEVGTFPEVG----DKFGRWLDL 157 (169)
T ss_pred EEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHHHHHCCCEEeccccccc----cccceEEee
Confidence 23349999999999999999999999999999998887666 4899999999999998653221 112222355
Q ss_pred EEEEccCC
Q 013702 419 YYMKKLLP 426 (438)
Q Consensus 419 ~~~k~ll~ 426 (438)
.+|.+.+.
T Consensus 158 ~~~~~~l~ 165 (169)
T COG1247 158 VLMQLLLE 165 (169)
T ss_pred eeeehhhc
Confidence 67766654
|
|
| >PRK10975 TDP-fucosamine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.8e-12 Score=118.15 Aligned_cols=124 Identities=18% Similarity=0.236 Sum_probs=94.4
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHc-CcCCcC-CHH----HHHhhc---------CcEEEEE-ECCEEEEEEEEeeecCC
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVES-GALVRR-TDE----ELLKAL---------DSFYVVE-REGQIIACAALFPFFKE 340 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~-~~~~~~-~~e----~l~~~~---------~~~~V~~-~dg~iVG~~~l~~~~~~ 340 (438)
...||+++++|++.+.+++...+.. .+..++ +.+ .+..++ ..++++. .++++||++.+... ..
T Consensus 46 ~~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~-~~ 124 (194)
T PRK10975 46 TTGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLREL-ND 124 (194)
T ss_pred CCCcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEec-CC
Confidence 4569999999999999999886443 222222 211 111111 1344554 46789999998753 33
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
..++|..++|+|+|||||+|++|++.+++++++.|++.+.+.+ +.+.+||+|+||+..+..
T Consensus 125 ~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~~~~~~ 189 (194)
T PRK10975 125 TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGANIESTA 189 (194)
T ss_pred CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCeEeEEE
Confidence 4588989999999999999999999999999999999999877 578999999999998764
|
|
| >KOG3139 consensus N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.4e-12 Score=111.67 Aligned_cols=100 Identities=21% Similarity=0.196 Sum_probs=79.2
Q ss_pred cEEEEEECCE-EEEEEEEeeec--CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHH
Q 013702 318 SFYVVEREGQ-IIACAALFPFF--KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWF 390 (438)
Q Consensus 318 ~~~V~~~dg~-iVG~~~l~~~~--~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY 390 (438)
.++++.+++. .||++...... ....++|..++|+++|||||||++|.+.+++.++.+|+..+.+.| ..|.++|
T Consensus 57 ~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY 136 (165)
T KOG3139|consen 57 FCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLY 136 (165)
T ss_pred EEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHH
Confidence 3444444333 48888765321 135799999999999999999999999999999999999999999 4899999
Q ss_pred HHCCCeEeceeccchHhhhhhcCCCCceEEEEcc
Q 013702 391 KSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 391 ~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
+++||+..+.. ..|.+++.+.+.++-.
T Consensus 137 ~sLGF~r~~r~-------~~YYlng~dA~rl~L~ 163 (165)
T KOG3139|consen 137 ESLGFKRDKRL-------FRYYLNGMDALRLKLF 163 (165)
T ss_pred HhcCceEecce-------eEEEECCcceEEEEee
Confidence 99999997655 2566777777777643
|
|
| >TIGR01575 rimI ribosomal-protein-alanine acetyltransferase | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.4e-12 Score=107.87 Aligned_cols=109 Identities=24% Similarity=0.381 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHH
Q 013702 287 DLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 362 (438)
Q Consensus 287 D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~ 362 (438)
|.+.+.++....+.. +++.+.+...+ ..++++.+++++||++.+... ....++..++|+|+|||||+|++
T Consensus 1 d~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~~~~i~~~~v~~~~rg~G~g~~ 74 (131)
T TIGR01575 1 DLKAVLEIEAAAFAF----PWTEAQFAEELANYHLCYLLARIGGKVVGYAGVQIV--LDEAHILNIAVKPEYQGQGIGRA 74 (131)
T ss_pred CHHHHHHHHHhhCCC----CCCHHHHHHHhcCCCceEEEEecCCeEEEEEEEEec--CCCeEEEEEEECHHHcCCCHHHH
Confidence 567777776554433 55666665544 245666678999999998743 34567889999999999999999
Q ss_pred HHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 363 LLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 363 Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
|++++++++.+.+++.+.+.+ ..+.+||+++||+..+..
T Consensus 75 ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~y~~~Gf~~~~~~ 117 (131)
T TIGR01575 75 LLRELIDEAKGRGVNEIFLEVRVSNIAAQALYKKLGFNEIAIR 117 (131)
T ss_pred HHHHHHHHHHHcCCCeEEEEEecccHHHHHHHHHcCCCccccc
Confidence 999999999999999998876 468999999999988754
|
Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. |
| >PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=1e-11 Score=98.16 Aligned_cols=75 Identities=36% Similarity=0.730 Sum_probs=64.4
Q ss_pred cEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCe
Q 013702 318 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFR 396 (438)
Q Consensus 318 ~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~ 396 (438)
.+++++++++++||+.+.+ .++..+|..++|+|+|||+|||++|++++.+.+. .+.+++.+ +.+.+||+++||+
T Consensus 4 ~~~~~~~~~~ivG~~~~~~--~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~---~~~i~l~~~~~~~~fY~~~GF~ 78 (79)
T PF13508_consen 4 RFFVAEDDGEIVGFIRLWP--NEDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAK---SKKIFLFTNPAAIKFYEKLGFE 78 (79)
T ss_dssp EEEEEEETTEEEEEEEEEE--TTTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHT---CSEEEEEEEHHHHHHHHHTTEE
T ss_pred EEEEEEECCEEEEEEEEEE--cCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcC---CCcEEEEEcHHHHHHHHHCcCC
Confidence 5788999999999999974 3458999999999999999999999999988884 35567766 6899999999998
Q ss_pred E
Q 013702 397 E 397 (438)
Q Consensus 397 ~ 397 (438)
+
T Consensus 79 ~ 79 (79)
T PF13508_consen 79 E 79 (79)
T ss_dssp E
T ss_pred C
Confidence 5
|
... |
| >PRK10314 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.4e-12 Score=113.68 Aligned_cols=122 Identities=13% Similarity=0.103 Sum_probs=89.0
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHh--hcCcEEEEEECCEEEEEEEEeeecC-CCeEEEEEEEECccccC
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK--ALDSFYVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRG 356 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~--~~~~~~V~~~dg~iVG~~~l~~~~~-~~~~~I~~v~V~p~yRg 356 (438)
+..++.+++..+..+....+......+...-+-.. .....+++..++++||++.+.+..+ ...++|..++|+|+|||
T Consensus 9 ~~~l~~~~~~~~~~lR~~VF~~eq~~~~~e~D~~d~~~~~~h~~~~~~~~~vg~~r~~~~~~~~~~~~i~rv~V~~~~rG 88 (153)
T PRK10314 9 HSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRG 88 (153)
T ss_pred hhhCCHHHHHHHHHHHHHHhhhhcCCCccccCCCCCCCCcEEEEEEECCEEEEEEEEecCCCCCCCEEEEEEEECHHHhC
Confidence 34567777788888877765443222221111111 1234566778999999999985432 23579999999999999
Q ss_pred CcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 357 QGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 357 qGiG~~Ll~~l~~~a~~~-g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
+|+|++||+.+++++++. +...+++.+ ..+.+||+|+||+.++..
T Consensus 89 ~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~~~a~~fY~k~GF~~~g~~ 135 (153)
T PRK10314 89 EKVGQQLMSKTLESCTRHWPDKPVYLGAQAHLQNFYQSFGFIPVTEV 135 (153)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCcEEEehHHHHHHHHHHCCCEECCCc
Confidence 999999999999999774 677888877 467899999999998754
|
|
| >cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.3e-12 Score=123.09 Aligned_cols=118 Identities=19% Similarity=0.176 Sum_probs=93.8
Q ss_pred eeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCcccccCCHH
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQ 139 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~i~~l~~~ 139 (438)
..+.+.|..+++.|.|||+++.. |.. ..++|.+|+.+|.+|+|++|+|+|||+|++ | ++++|++++.+
T Consensus 105 ~~~~~~l~~~l~~g~ipVi~g~~----g~~-~~~sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~ 179 (229)
T cd04239 105 PYIRRRAIRHLEKGRIVIFGGGT----GNP-GFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYD 179 (229)
T ss_pred cccHHHHHHHHhCCCEEEEeCcc----CCC-CCCcHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHH
Confidence 34789999999999999999765 332 348999999999999999999999999883 2 48999999988
Q ss_pred HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccc
Q 013702 140 EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGG 219 (438)
Q Consensus 140 e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~ 219 (438)
|+.++..
T Consensus 180 e~~~~~~------------------------------------------------------------------------- 186 (229)
T cd04239 180 ELLKKGL------------------------------------------------------------------------- 186 (229)
T ss_pred HHHHHhc-------------------------------------------------------------------------
Confidence 8776631
Q ss_pred cchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 220 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
+..++.++..+.+.|++ ++|++++.++. +.+++.++..||.|.
T Consensus 187 ---------~~~~~~a~~~~~~~~i~-v~I~~g~~~~~-l~~~l~g~~~GT~i~ 229 (229)
T cd04239 187 ---------KVMDATALTLCRRNKIP-IIVFNGLKPGN-LLRALKGEHVGTLIE 229 (229)
T ss_pred ---------CCccHHHHHHHHHCCCe-EEEECCCChhH-HHHHHcCCCCCeEeC
Confidence 12234556667788875 99999999986 467777777899873
|
Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als |
| >PRK10514 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.5e-11 Score=108.05 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=82.7
Q ss_pred eEEEECCccCHHHHHHHHHHHHH--cCcCCcCCHHHHHhhc------CcEEEEE-ECCEEEEEEEEeeecCCCeEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVE--SGALVRRTDEELLKAL------DSFYVVE-REGQIIACAALFPFFKEKCGEVAAI 348 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~--~~~~~~~~~e~l~~~~------~~~~V~~-~dg~iVG~~~l~~~~~~~~~~I~~v 348 (438)
+.||+++++|.+.+.+++.+... ..+..+.+.+.+...+ ..++++. .++++||++.+.+ .++..+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~------~~~~~~ 75 (145)
T PRK10514 2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLPEAPLWVAVDERDQPVGFMLLSG------GHMEAL 75 (145)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhccCceEEEEecCCcEEEEEEEec------CcEeEE
Confidence 57999999999999999987432 1222233343333322 2344554 5799999998852 246689
Q ss_pred EECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 349 ~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
+|+|+|||||+|++|++++++.++ .+.+.+ +.+.+||+|+||+..+...
T Consensus 76 ~v~p~~rgkGig~~Ll~~~~~~~~-----~i~~~v~~~N~~a~~~yek~Gf~~~~~~~ 128 (145)
T PRK10514 76 FVDPDVRGCGVGRMLVEHALSLHP-----ELTTDVNEQNEQAVGFYKKMGFKVTGRSE 128 (145)
T ss_pred EECHHhccCCHHHHHHHHHHHhcc-----ccEEEeecCCHHHHHHHHHCCCEEecccc
Confidence 999999999999999999998753 233333 5899999999999987654
|
|
| >TIGR02076 pyrH_arch uridylate kinase, putative | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.6e-12 Score=120.39 Aligned_cols=122 Identities=19% Similarity=0.182 Sum_probs=90.5
Q ss_pred HHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHH
Q 013702 70 VTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEAD 142 (438)
Q Consensus 70 ~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~ 142 (438)
......+++.|.|||+.+.. -.+++|++|+.+|.+|+|++|+|+|||+|++ +++++|++++.+|+.
T Consensus 93 ~~~~~~~l~~g~ipv~~G~~-------~~~s~D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~ 165 (221)
T TIGR02076 93 FEEALEAMSLGKIVVMGGTH-------PGHTTDAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELV 165 (221)
T ss_pred HHHHHHHHHcCCEEEEcCCC-------CCCCcHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHH
Confidence 34445556666666666431 1378999999999999999999999999873 357999999998888
Q ss_pred HHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccch
Q 013702 143 SLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQER 222 (438)
Q Consensus 143 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~ 222 (438)
++..++. ++.|.+
T Consensus 166 ~~~~~~~----------------------------------------------------~~~g~~--------------- 178 (221)
T TIGR02076 166 EIVGSSS----------------------------------------------------VKAGSN--------------- 178 (221)
T ss_pred HHhcCCC----------------------------------------------------ccCCCC---------------
Confidence 8754321 112212
Q ss_pred hhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 223 LSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|+.|+.++..+.+.|++ ++|++++.|+.++ .++.++..||.|.
T Consensus 179 ------~~~~~~a~~~~~~~~i~-v~I~~g~~~~~l~-~~l~g~~~GT~i~ 221 (221)
T TIGR02076 179 ------EVVDPLAAKIIERSKIR-TIVVNGRDPENLE-KVLKGEHVGTIIE 221 (221)
T ss_pred ------ceeHHHHHHHHHHCCCc-EEEECCCCccHHH-HHHCCCCCCeEeC
Confidence 66788888888888885 9999999998765 4667777899873
|
This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP. |
| >TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.8e-11 Score=130.92 Aligned_cols=122 Identities=18% Similarity=0.219 Sum_probs=94.9
Q ss_pred ceeEEEEC-CccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEE--CCEEEEEEEEeee----c-CCCeE
Q 013702 276 LYEGTRTA-KVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVER--EGQIIACAALFPF----F-KEKCG 343 (438)
Q Consensus 276 ~~~~IR~a-t~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~--dg~iVG~~~l~~~----~-~~~~~ 343 (438)
..+.||++ +++|++.|.+++.... ..+++.+.+.... ..++++++ ++++|||+..... . .....
T Consensus 81 ~g~~IR~~~~~~D~~~I~~L~~~~~----~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~ 156 (547)
T TIGR03103 81 RGFTVRRLRGPADVDAINRLYAARG----MVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGS 156 (547)
T ss_pred CCcEEEeCCChhHHHHHHHHHHhcC----CCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCe
Confidence 34789997 6899999999987632 2334444443332 34677775 5899999975421 1 12357
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+++.++|+|+|||+|+|++||+.+++++++.|+..+.+.+ ..+++||+|+||+.+...
T Consensus 157 ~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~fY~klGf~~~~~y 218 (547)
T TIGR03103 157 SLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLGFRRIPVF 218 (547)
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEEeeEE
Confidence 8999999999999999999999999999999999999887 578999999999987644
|
Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein. |
| >cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.7e-12 Score=118.89 Aligned_cols=125 Identities=19% Similarity=0.189 Sum_probs=98.2
Q ss_pred eeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHH
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ 139 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~ 139 (438)
.++.+.+..+|+.|.|||+.... + ++.+|++|+.+|.+|+|++|+|+|||+|++ +++++|++++.+
T Consensus 90 ~~~~~~~~~~l~~g~vpv~~G~~--~-----~~s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~ 162 (221)
T cd04253 90 PTSYEEALEAMFTGKIVVMGGTE--P-----GQSTDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSAD 162 (221)
T ss_pred CCCHHHHHHHHHcCCeEEEECCC--C-----CCccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHH
Confidence 44678889999999999998652 1 367899999999999999999999999883 248999999998
Q ss_pred HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccc
Q 013702 140 EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGG 219 (438)
Q Consensus 140 e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~ 219 (438)
|+.++..... +..|.+
T Consensus 163 e~~~~~~~~~----------------------------------------------------~~~g~~------------ 178 (221)
T cd04253 163 ELIDIVGKSS----------------------------------------------------WKAGSN------------ 178 (221)
T ss_pred HHHHHccCCC----------------------------------------------------cCCCCC------------
Confidence 8888753311 001211
Q ss_pred cchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 220 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|..++.++..+.+.|++ ++|++++.|+. +.+++.++..||.|.
T Consensus 179 ---------~~~d~~a~~~~~~~gi~-~~I~~g~~p~~-l~~~l~g~~~GT~I~ 221 (221)
T cd04253 179 ---------EPFDPLAAKIIERSGIK-TIVVDGRDPEN-LERALKGEFVGTIIE 221 (221)
T ss_pred ---------cchHHHHHHHHHHCCCe-EEEECCCCccH-HHHHHCCCCCCeEeC
Confidence 55678888888999986 89999999985 466777778899873
|
The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi |
| >cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway) | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.6e-12 Score=119.34 Aligned_cols=118 Identities=20% Similarity=0.210 Sum_probs=91.9
Q ss_pred eeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHH
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ 139 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~ 139 (438)
.++.+.|..+|+.|.|||++.. .|.. .+++|++|+.+|.+|+|++|+|+|||+|++ +++++|++++.+
T Consensus 107 ~~~~~~l~~~l~~g~ipV~~g~----~G~~-~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~ 181 (231)
T cd04254 107 PYIRRRAIRHLEKGRVVIFAGG----TGNP-FFTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYD 181 (231)
T ss_pred ccCHHHHHHHHHCCCEEEEECC----cCCC-CCCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHH
Confidence 5789999999999999999832 2333 458999999999999999999999999873 257899999987
Q ss_pred HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccc
Q 013702 140 EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGG 219 (438)
Q Consensus 140 e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~ 219 (438)
|+.+. +.
T Consensus 182 ~~~~~---~~---------------------------------------------------------------------- 188 (231)
T cd04254 182 EVLSK---GL---------------------------------------------------------------------- 188 (231)
T ss_pred HHHhc---ch----------------------------------------------------------------------
Confidence 76442 21
Q ss_pred cchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 220 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
..-++.++..|.++|++ ++|+++..|+.| ..++.++..||.|.
T Consensus 189 ---------~~~d~~a~~~a~~~gi~-~~I~~g~~~~~l-~~~l~g~~~GT~i~ 231 (231)
T cd04254 189 ---------KVMDATAFTLCRDNNLP-IVVFNINEPGNL-LKAVKGEGVGTLIS 231 (231)
T ss_pred ---------hhhHHHHHHHHHHCCCe-EEEEeCCCccHH-HHHHCCCCCCEEeC
Confidence 01245667777778986 899999999865 45556667899874
|
The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.8e-11 Score=119.03 Aligned_cols=122 Identities=16% Similarity=0.223 Sum_probs=97.1
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCc-CCcCCHHHHHhhcC--cEEEEEE-----CCEEEEEEEEeeecCCCeEEEE
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKALD--SFYVVER-----EGQIIACAALFPFFKEKCGEVA 346 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~-~~~~~~e~l~~~~~--~~~V~~~-----dg~iVG~~~l~~~~~~~~~~I~ 346 (438)
++.++||+++++|++.+.+|......-.. ...++.+++...+. ..+++.. ++.+||++.+.. ..+.++|.
T Consensus 184 ~m~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~~l~~~~~~~~~~~d~~gd~givG~~~~~~--~~~~~~I~ 261 (320)
T TIGR01686 184 ELSLNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQHMQKEEIVTVSMSDRFGDSGIIGIFVFEK--KEGNLFID 261 (320)
T ss_pred CCEEEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHHHhcCCCEEEEEEEecCCCCceEEEEEEEe--cCCcEEEE
Confidence 45578999999999999999876532221 24567777776652 3444432 567999998763 34678999
Q ss_pred EEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHHCCCeEe
Q 013702 347 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFREC 398 (438)
Q Consensus 347 ~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t------~~a~~fY~k~GF~~~ 398 (438)
.++|+|+|||+|+|++||++++++|++.|++.+++.+ .++++||+++||+..
T Consensus 262 ~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 262 DLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 9999999999999999999999999999999888755 479999999999864
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK00358 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-11 Score=118.69 Aligned_cols=116 Identities=20% Similarity=0.160 Sum_probs=90.2
Q ss_pred CHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHH
Q 013702 69 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEA 141 (438)
Q Consensus 69 ~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~ 141 (438)
+.+.+..+|++|.|||+++.. +.. ..++|.+|+.||.+|+|++|+|+|||+|++ +++++|++++.+|+
T Consensus 109 ~~~~~~~~l~~g~vPVv~g~~----~~~-~~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~ 183 (231)
T PRK00358 109 IRRRAIRHLEKGRVVIFAAGT----GNP-FFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEV 183 (231)
T ss_pred cHHHHHHHHHCCCEEEEECCC----CCC-CCCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHH
Confidence 456788999999999997532 222 358999999999999999999999999873 35899999998774
Q ss_pred HHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccc
Q 013702 142 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 221 (438)
Q Consensus 142 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~ 221 (438)
.++ |.
T Consensus 184 ~~~---g~------------------------------------------------------------------------ 188 (231)
T PRK00358 184 LEK---GL------------------------------------------------------------------------ 188 (231)
T ss_pred HHc---CC------------------------------------------------------------------------
Confidence 443 22
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 222 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
...++.++..|.+.|++ ++|+|+..|+.+ ..++.++..||.|.
T Consensus 189 -------~~~d~~a~~~a~~~~i~-v~I~~g~~~~~l-~~~l~g~~~GT~i~ 231 (231)
T PRK00358 189 -------KVMDATAISLARDNKIP-IIVFNMNKPGNL-KRVVKGEHIGTLVS 231 (231)
T ss_pred -------cchhHHHHHHHHHcCCc-EEEECCCCchHH-HHHHCCCCCCEEeC
Confidence 12356677777788986 899999999864 56667777899873
|
|
| >COG0456 RimI Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.5e-11 Score=108.19 Aligned_cols=125 Identities=22% Similarity=0.315 Sum_probs=95.5
Q ss_pred CceeEEEECCccCHH--HHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEE---CC----EEEEEEEEeeecCC-
Q 013702 275 DLYEGTRTAKVTDLS--GIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVER---EG----QIIACAALFPFFKE- 340 (438)
Q Consensus 275 d~~~~IR~at~~D~~--~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~---dg----~iVG~~~l~~~~~~- 340 (438)
.....+|+++..|.+ .+..+....+... .+|+...+...+ ..+++... ++ +++||+........
T Consensus 9 ~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~ 86 (177)
T COG0456 9 EDKVTIREAINKDLLDVALAALEARTFDIR--LPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRP 86 (177)
T ss_pred ccceehhhhhhcccchHHHHHHhhhcCCCC--CcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCc
Confidence 455679999999998 6666643333221 567766666554 34556655 33 59999998643332
Q ss_pred ---CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCC-CEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 341 ---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL-DMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ---~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~-~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
..++|..++|+|+|||+|||++|++.+++.+++.+. ..+.+.+ ..++.||+++||+..+..
T Consensus 87 ~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~ 155 (177)
T COG0456 87 SADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEVVKIR 155 (177)
T ss_pred cccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEEEeee
Confidence 278999999999999999999999999999999886 7888888 589999999999998754
|
|
| >COG3153 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.3e-10 Score=105.22 Aligned_cols=127 Identities=18% Similarity=0.255 Sum_probs=100.5
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeec----CCCeEEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF----KEKCGEVAA 347 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~----~~~~~~I~~ 347 (438)
+++.||..++.|++.|.++....+..+- .....+.+.... ...+|+.+++++||++.+.+.. .....-+..
T Consensus 2 ~~~~ir~e~~~d~~~i~~~~~~aF~~~~-e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaP 80 (171)
T COG3153 2 MMMLIRTETPADIPAIEALTREAFGPGR-EAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAP 80 (171)
T ss_pred CccEEEecChhhHHHHHHHHHHHhhcch-HHHHHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEecCcccceEEEEe
Confidence 4578999999999999999988776221 111222333222 3578999999999999998753 225667899
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEeceeccch
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPE 405 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~~lp~ 405 (438)
++|+|+|||||||++|++..++.++..|+..+.+.- ...+|.++||+......++.
T Consensus 81 LaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlG--dp~YY~rfGF~~~~~~~l~~ 136 (171)
T COG3153 81 LAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLG--DPTYYSRFGFEPAAGAKLYA 136 (171)
T ss_pred EEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEec--CcccccccCcEEcccccccc
Confidence 999999999999999999999999999999998864 56899999999998766553
|
|
| >PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.7e-10 Score=103.98 Aligned_cols=125 Identities=11% Similarity=0.087 Sum_probs=94.5
Q ss_pred ceeEEEECCccCHHHHHHHHHHH--HHcC---cC-CcCCHHHHHhhcC-----------cEEEEEECCEEEEEEEEeeec
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPL--VESG---AL-VRRTDEELLKALD-----------SFYVVEREGQIIACAALFPFF 338 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~--~~~~---~~-~~~~~e~l~~~~~-----------~~~V~~~dg~iVG~~~l~~~~ 338 (438)
..+.+|+++++|++.+.+++... .... .. .+.+.++..+++. .++++..++++||++.+....
T Consensus 9 ~rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~~~ 88 (179)
T PRK10151 9 ESLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNRIE 88 (179)
T ss_pred CcEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEeec
Confidence 34679999999999999998432 1111 11 1234444444331 257777899999999987543
Q ss_pred -CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 339 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 339 -~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
....+++ .++++|+|||+|||+++++.+++++.+ .+++++.+.+ .++.++|+|+||+..+..
T Consensus 89 ~~~~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~ 156 (179)
T PRK10151 89 PLNKTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFTLEGCL 156 (179)
T ss_pred cCCCceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeEe
Confidence 3356787 678999999999999999999999965 6899988876 589999999999998864
|
|
| >PRK15130 spermidine N1-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=105.58 Aligned_cols=125 Identities=20% Similarity=0.220 Sum_probs=93.4
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcC---CHHHH----Hhhc----CcEEEEEECCEEEEEEEEeeecC-CCeE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRR---TDEEL----LKAL----DSFYVVEREGQIIACAALFPFFK-EKCG 343 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~---~~e~l----~~~~----~~~~V~~~dg~iVG~~~l~~~~~-~~~~ 343 (438)
..+.+|+++++|++.+.++........+.... ...+. .... ...|++..++++||++.+..... ...+
T Consensus 5 ~~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~~~~~~ 84 (186)
T PRK15130 5 HSVKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRA 84 (186)
T ss_pred CeeEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecCCCCeE
Confidence 34679999999999999997654322222111 11111 1111 34677788999999999875432 3456
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
++ .++|+|+|||+|+|+++++.+++++.+ .++.++.+.+ .++.+||+|+||+..+..
T Consensus 85 ~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek~GF~~~~~~ 146 (186)
T PRK15130 85 EF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFEVEGEL 146 (186)
T ss_pred EE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHHCCCEEEEEE
Confidence 66 699999999999999999999999964 7999998877 489999999999998753
|
|
| >TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=103.45 Aligned_cols=121 Identities=18% Similarity=0.182 Sum_probs=92.2
Q ss_pred EEEECCccCHHHHHHHHHHHHHcCcC---CcCCHHHHHhhc--------CcEEEEEECCEEEEEEEEeeecC-CCeEEEE
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK-EKCGEVA 346 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~~~---~~~~~e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~~~-~~~~~I~ 346 (438)
.+|+++++|++.+.++........+. ...+.++...++ ..++++..++++||++.+..... ...+++
T Consensus 2 ~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~~~~~- 80 (156)
T TIGR03585 2 NFTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINLVHKSAFW- 80 (156)
T ss_pred CcccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecChhhCeEEE-
Confidence 48999999999999998764433222 123433332222 24678888999999999985442 345666
Q ss_pred EEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 347 AIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 347 ~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.+++.|.+| +|||+++++.+++++.+ .+++.+.+.+ ..+++||+|+||+..+..
T Consensus 81 g~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k~Gf~~~g~~ 139 (156)
T TIGR03585 81 GIYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEKFGFEREGVF 139 (156)
T ss_pred EEEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHHcCCeEeeee
Confidence 456999999 99999999999999975 7999998877 589999999999998854
|
Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar. |
| >PRK01346 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=120.75 Aligned_cols=124 Identities=15% Similarity=0.129 Sum_probs=95.0
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeec-----C--CCeEEE
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFF-----K--EKCGEV 345 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~-----~--~~~~~I 345 (438)
.+.+.||+++.+|++++.+++...+.... .....+.+.... ...+++++++++||++.+.++. . ....+|
T Consensus 4 ~~~~~iR~~~~~D~~~i~~L~~~~f~~~~-~~~~~~~~~~~~~~~~~~va~~~~~lvg~~~~~~~~~~~~~~~~~~~~~i 82 (411)
T PRK01346 4 DMAITIRTATEEDWPAWFRAAATGFGDSP-SDEELEAWRALVEPDRTLGAFDGDEVVGTAGAFDLRLTVPGGAVLPAAGV 82 (411)
T ss_pred CCCceeecCCHHHHHHHHHHHHHHcCCCC-ChHHHHHHHHhcCcCCeEEEEECCEEEEEEEEeccccccCCCCccceeEE
Confidence 35578999999999999999876654322 111112222211 3568888999999999987542 1 146889
Q ss_pred EEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 346 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 346 ~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
..++|+|+|||+|+|++||+++++.+++.|+..+.+.+. ...||+|+||.....
T Consensus 83 ~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~-~~~~Y~r~Gf~~~~~ 136 (411)
T PRK01346 83 TAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTAS-EGGIYGRFGYGPATY 136 (411)
T ss_pred EEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECC-chhhHhhCCCeeccc
Confidence 999999999999999999999999999999988877763 358999999998753
|
|
| >PRK10562 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.1e-10 Score=101.14 Aligned_cols=112 Identities=19% Similarity=0.288 Sum_probs=79.6
Q ss_pred EEECCccCHHHHHHHHHHHHHc--CcCCcC----CHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEE
Q 013702 280 TRTAKVTDLSGIKQIIQPLVES--GALVRR----TDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 350 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~--~~~~~~----~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V 350 (438)
||+++.+|++.+.+++...... .+.... ..+.+.... ..++++..++++||++.+... .++..++|
T Consensus 2 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~~-----~~i~~~~v 76 (145)
T PRK10562 2 IREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLEG-----RFVGALFV 76 (145)
T ss_pred cccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEeec-----cEEEEEEE
Confidence 7999999999999998654221 111100 011111111 245777888999999988632 36778999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+|+|||+|+|++|++++++.+ ..+.+.+ ..+.+||+|+||+.++..
T Consensus 77 ~~~~rg~G~g~~ll~~~~~~~-----~~~~~~v~~~N~~s~~~y~k~Gf~~~~~~ 126 (145)
T PRK10562 77 APKAVRRGIGKALMQHVQQRY-----PHLSLEVYQKNQRAVNFYHAQGFRIVDSA 126 (145)
T ss_pred CHHHcCCCHHHHHHHHHHhhC-----CeEEEEEEcCChHHHHHHHHCCCEEcccc
Confidence 999999999999999998754 3344433 589999999999998865
|
|
| >PRK08373 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.5e-10 Score=116.37 Aligned_cols=109 Identities=18% Similarity=0.147 Sum_probs=85.1
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeE----eeeCHHHHHHHhcCCceEEEcCcccCCCCCeee
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV----KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLN 98 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v----~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~n 98 (438)
.|+.+|.+ |.-+++.+- +.+... +| ..+| +..+.+.|..+++.|.|||++++..+.+|.+.+
T Consensus 120 ~L~~~Gi~----a~~l~~~~~-i~t~~~--------~~-~a~i~~~~s~~~~~~l~~~l~~g~VpVv~Gf~g~~~G~~tt 185 (341)
T PRK08373 120 ALENEGIK----GKVVDPWEI-LEAKGS--------FG-NAFIDIKKSKRNVKILYELLERGRVPVVPGFIGNLNGFRAT 185 (341)
T ss_pred HHHHCCCc----eEEEeHHHh-eeecCC--------cc-ceeechhhhhhhHHHHHHHHhCCcEEEEeCCccCCCCeEEE
Confidence 56677765 887877664 333221 11 1222 346779999999999999999975577888877
Q ss_pred c---ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHH
Q 013702 99 C---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLI 145 (438)
Q Consensus 99 i---naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~ 145 (438)
+ ++|.+|+.+|.+|+|++++|+|||+|+. +++++|++|+.+|+.++.
T Consensus 186 LGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~isy~Ea~ela 242 (341)
T PRK08373 186 LGRGGSDYSAVALGVLLNAKAVLIMSDVEGIYTADPKLVPSARLIPYLSYDEALIAA 242 (341)
T ss_pred cCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEcccCCHHHHHHHH
Confidence 6 8999999999999999999999999883 347899999999999885
|
|
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.5e-10 Score=109.94 Aligned_cols=125 Identities=18% Similarity=0.173 Sum_probs=93.2
Q ss_pred ceeEEEECCc-cCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhc-------CcEEEEEE--CCEEEEEEEEeeec-CCCeE
Q 013702 276 LYEGTRTAKV-TDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFF-KEKCG 343 (438)
Q Consensus 276 ~~~~IR~at~-~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~-------~~~~V~~~--dg~iVG~~~l~~~~-~~~~~ 343 (438)
.-+.+|+++. .|.+.+.++....+..... ..++.+.+.... ..++++.+ ++++|||+.+.... .....
T Consensus 148 ~g~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~~~~~~~ 227 (292)
T TIGR03448 148 DGVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHPDEPALG 227 (292)
T ss_pred CCeEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecCCCCcee
Confidence 3467899864 5888888887666544322 345555554321 23566666 58999997655332 23456
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
++..++|+|+|||||+|++|++.+++++++.|+..+.+.+ ..+.+||+|+||+..+.
T Consensus 228 ~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 288 (292)
T TIGR03448 228 EVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAEV 288 (292)
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEEccc
Confidence 7878999999999999999999999999999999988877 47899999999998654
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.5e-10 Score=109.97 Aligned_cols=114 Identities=15% Similarity=0.190 Sum_probs=86.3
Q ss_pred EECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcc
Q 013702 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 353 (438)
Q Consensus 281 R~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~ 353 (438)
.+++++|+++|.+|+..........+++.+.. ..+ ...+++.+++++|||+.+.+.. ....++..++|+|+
T Consensus 4 ~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~-~~~~~~~~l~V~p~ 81 (292)
T TIGR03448 4 AALDADLRRDVRELLAAATAVDGVAPVSEQVL-RGLREPGAGHTRHLVAVDSDPIVGYANLVPAR-GTDPAMAELVVHPA 81 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCHHHH-hhccccCCCCceEEEEEECCEEEEEEEEEcCC-CCcceEEEEEECHh
Confidence 36788999999999987766543445555443 332 2367788899999999987543 23467889999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
|||+|||++||+++++.+. ..+.+.+ ..+++||+++||+....
T Consensus 82 ~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~fy~~~Gf~~~~~ 128 (292)
T TIGR03448 82 HRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARALASRLGLVPTRE 128 (292)
T ss_pred hcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHHHHHCCCEEccE
Confidence 9999999999999999874 2333333 47899999999998763
|
Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species. |
| >PRK14558 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.4e-11 Score=112.51 Aligned_cols=119 Identities=21% Similarity=0.227 Sum_probs=92.1
Q ss_pred eeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHH
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ 139 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~ 139 (438)
..+.+.|..+|+.|.|||++... | .-.+++|.+|+.+|..|+|+.|+++|||+|++ +++++|++++.+
T Consensus 105 ~~~~~~i~~ll~~g~vpV~~G~~----~-~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~ 179 (231)
T PRK14558 105 PINYDDIELYFRAGYIVIFAGGT----S-NPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFS 179 (231)
T ss_pred hhhHHHHHHHHHCCCEEEEECCC----C-CCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHH
Confidence 45689999999999999998752 1 22457899999999999999999999999883 358999999987
Q ss_pred HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccc
Q 013702 140 EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGG 219 (438)
Q Consensus 140 e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~ 219 (438)
|+.++ +.. .
T Consensus 180 e~~~~---g~~--------------------------------------------------------~------------ 188 (231)
T PRK14558 180 EAIKM---GLK--------------------------------------------------------V------------ 188 (231)
T ss_pred HHHHc---Ccc--------------------------------------------------------c------------
Confidence 76654 210 0
Q ss_pred cchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 220 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
| +..++.-|.++|++ ++|+|+..++.+. .++.++..||.|.+
T Consensus 189 ---------~--d~~a~~~a~~~gi~-v~I~ng~~~~~l~-~~l~g~~~GT~i~~ 230 (231)
T PRK14558 189 ---------M--DTEAFSICKKYGIT-ILVINFFEPGNLL-KALKGENVGTLVVP 230 (231)
T ss_pred ---------c--cHHHHHHHHHCCCC-EEEEeCCCCCHHH-HHHCCCCCcEEeCC
Confidence 2 24456667788997 9999999888654 55566778999865
|
|
| >PHA01807 hypothetical protein | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.6e-10 Score=99.98 Aligned_cols=112 Identities=19% Similarity=0.169 Sum_probs=82.1
Q ss_pred ECCccCHHHHHHHHHHHHHcCcCC-cC-C-H---HHHHhhc----CcEEEEEECCEEEEEEEEeeecCCCeEE---EEEE
Q 013702 282 TAKVTDLSGIKQIIQPLVESGALV-RR-T-D---EELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGE---VAAI 348 (438)
Q Consensus 282 ~at~~D~~~I~~L~~~~~~~~~~~-~~-~-~---e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~~~~~~---I~~v 348 (438)
.++.+|+..+..+......+.... +| + . +.+.... ...++++.++++|||+.+.+.......+ +..+
T Consensus 8 ~~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~~~~~~i~~l~~l 87 (153)
T PHA01807 8 HAKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFRDGKLAGIAVLVFEDDPHVGPCLGVQWQ 87 (153)
T ss_pred hhhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEECCEEEEEEEEEcCCCcceeeeccceeE
Confidence 467789999999987765443211 11 1 1 2222211 2357788899999999987544332333 4457
Q ss_pred EECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHC
Q 013702 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSR 393 (438)
Q Consensus 349 ~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~ 393 (438)
+|+|+|||+|+|++||+.++++|++.|+..+.+.+ .++.+||++.
T Consensus 88 YV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~y~~~ 136 (153)
T PHA01807 88 YVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIHYRRV 136 (153)
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHhc
Confidence 99999999999999999999999999999998888 4899999983
|
|
| >KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.6e-10 Score=97.48 Aligned_cols=119 Identities=23% Similarity=0.360 Sum_probs=95.2
Q ss_pred eEEEECCccCHHH-HHHHHHHHHHcCcCCcCCHHHHHhhc-------C-cEEE-EEE--CCEEEEEEEEeee-----cCC
Q 013702 278 EGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL-------D-SFYV-VER--EGQIIACAALFPF-----FKE 340 (438)
Q Consensus 278 ~~IR~at~~D~~~-I~~L~~~~~~~~~~~~~~~e~l~~~~-------~-~~~V-~~~--dg~iVG~~~l~~~-----~~~ 340 (438)
+.+|++..+|+.. ..+++.++-..+.. ++++|...+ . ++.+ +++ .++++|.+.+... .-.
T Consensus 7 ~~lR~L~~~D~~kGf~elL~qLT~vG~v---t~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g 83 (150)
T KOG3396|consen 7 FKLRPLEEDDYGKGFIELLKQLTSVGVV---TREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCG 83 (150)
T ss_pred eEEeecccccccchHHHHHHHHhhcccc---CHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhccc
Confidence 6899999999996 88888888777654 344444332 2 3333 333 3789999988632 123
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
..++|..+.|+++||||++|+.|++.+...++..||..+.+.| +....||+|+||...+
T Consensus 84 ~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~FYeKcG~s~~~ 143 (150)
T KOG3396|consen 84 SRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVKFYEKCGYSNAG 143 (150)
T ss_pred ccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhhHHHHcCccccc
Confidence 6778999999999999999999999999999999999999999 6889999999999765
|
|
| >COG0527 LysC Aspartokinases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.5e-10 Score=118.63 Aligned_cols=114 Identities=18% Similarity=0.216 Sum_probs=98.7
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHH-HHHHhcCCceEEEcCc-ccCCCCCeeec-
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTR-MRERLDGGCLVILSNL-GYSSSGEVLNC- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~-i~~ll~~g~IPVi~~i-~~~~~g~~~ni- 99 (438)
.|+..|.+ |.-+++.+.++++....+ ..+|...+.+. |..+++.+.|||++++ |.+++|++..+
T Consensus 129 ~L~~~Gv~----A~~~~~~~~~i~t~~~~~---------~a~i~~~~~~~~l~~~~~~~~v~Vv~GF~G~~~~G~~tTLG 195 (447)
T COG0527 129 ALNALGVD----ARSLDGRQAGIATDSNHG---------NARILDEDSERRLLRLLEEGKVPVVAGFQGINEDGETTTLG 195 (447)
T ss_pred HHHhCCCc----eEEEchHHceeeecCccc---------ccccchhhhhhhHHHHhcCCcEEEecCceeecCCCCEEEeC
Confidence 67777875 999999999998865433 55666677777 9999999999999997 99999999888
Q ss_pred --ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHhhh
Q 013702 100 --NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 100 --naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
.+|..|+.||.+|+||.+.+.|||+|+ | |+.++|+.||++|+.+|...|.
T Consensus 196 RGGSD~SA~~laa~l~Ad~~~I~TDVdGI~TaDPRiVp~Ar~i~~isyeEa~ELA~~GA 254 (447)
T COG0527 196 RGGSDYSAAALAAALGADEVEIWTDVDGVYTADPRIVPDARLLPEISYEEALELAYLGA 254 (447)
T ss_pred CCcHHHHHHHHHHHcCCCEEEEEECCCCCccCCCCCCCcceEcCccCHHHHHHHHHCCc
Confidence 589999999999999999999999998 4 4699999999999999977664
|
|
| >PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-09 Score=95.25 Aligned_cols=118 Identities=20% Similarity=0.265 Sum_probs=87.9
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCc---CCc-CCHHHHHhhcC-----------cEEEEEE-C-CEEEEEEEEee-ecC
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGA---LVR-RTDEELLKALD-----------SFYVVER-E-GQIIACAALFP-FFK 339 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~---~~~-~~~e~l~~~~~-----------~~~V~~~-d-g~iVG~~~l~~-~~~ 339 (438)
+.||+++++|++.+.++........+ ... .+.+...+++. .+|++.. + +++||++.+.. ...
T Consensus 2 l~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~~ 81 (142)
T PF13302_consen 2 LTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDKN 81 (142)
T ss_dssp EEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEETT
T ss_pred EEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeecccC
Confidence 57999999999999999863322222 111 25555443331 1345554 3 47999999943 345
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCe
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFR 396 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~ 396 (438)
...+++ .+.|.|+|||+|+|+.++..+++++ ++.++.++.+.+ .++.++++|+||+
T Consensus 82 ~~~~ei-g~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 82 NNWAEI-GYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp TTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred CCcccc-ccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 688998 5999999999999999999999999 679999999888 5899999999996
|
... |
| >PRK13688 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.1e-10 Score=102.02 Aligned_cols=107 Identities=19% Similarity=0.344 Sum_probs=77.4
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeec---------CCCeEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF---------KEKCGEVAAI 348 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~---------~~~~~~I~~v 348 (438)
-+||++..+|++.+.++....+... .-..++++++++++||++.+.... ..+.++|..+
T Consensus 18 ~~~~~~~~~dl~~l~~l~~~~f~~~------------~~~~~~~~~~~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l 85 (156)
T PRK13688 18 KKFREFGNQELSMLEELQANIIEND------------SESPFYGIYYGDSLVARMSLYKKGGVEEPYFEDTQDYLELWKL 85 (156)
T ss_pred HHHHHhcHHHHHHHHhhhhhEeecC------------CCCCEEEEEECCEEEEEEEEEecCCcccccccCCCCeEEEEEE
Confidence 3467788888888888854433211 123567888899999998875321 2356799999
Q ss_pred EECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 349 ~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
+|+|+|||||||++|++++. +.++. +.+.. +.+.+||+|+||+..+..
T Consensus 86 ~V~p~~rgkGiG~~Ll~~a~----~~~~~-~~~~~~~~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 86 EVLPKYQNRGYGEMLVDFAK----SFQLP-IKTIARNKSKDFWLKLGFTPVEYK 134 (156)
T ss_pred EECHHHcCCCHHHHHHHHHH----HhCCe-EEEEeccchHHHHHhCCCEEeEEe
Confidence 99999999999999998644 44444 33322 568899999999998765
|
|
| >cd02169 Citrate_lyase_ligase Citrate lyase ligase | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.4e-10 Score=111.92 Aligned_cols=75 Identities=27% Similarity=0.507 Sum_probs=67.3
Q ss_pred EEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeE
Q 013702 319 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRE 397 (438)
Q Consensus 319 ~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~ 397 (438)
+++..+++++|||+.+.. .+|..++|+|+|||+|+|++||+++++++++.|++.+++.+ +.+..||+|+||+.
T Consensus 8 ~~v~~~~~~iVG~~~l~~------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~~~fYek~GF~~ 81 (297)
T cd02169 8 VGIFDDAGELIATGSIAG------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKNAKFFRGLGFKE 81 (297)
T ss_pred EEEEEECCEEEEEEEecc------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccHHHHHHHCCCEE
Confidence 566677899999998862 26899999999999999999999999999999999999998 45789999999998
Q ss_pred ec
Q 013702 398 CS 399 (438)
Q Consensus 398 ~g 399 (438)
.+
T Consensus 82 ~~ 83 (297)
T cd02169 82 LA 83 (297)
T ss_pred ec
Confidence 88
|
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction. |
| >PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.3e-09 Score=99.25 Aligned_cols=123 Identities=12% Similarity=0.062 Sum_probs=89.0
Q ss_pred eEEEECCccCHHHHHHHHHHHHH--cCcCCcC-----CHHH-------HHhhc----CcEEEEEE--CCEEEEEEEEeee
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVE--SGALVRR-----TDEE-------LLKAL----DSFYVVER--EGQIIACAALFPF 337 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~--~~~~~~~-----~~e~-------l~~~~----~~~~V~~~--dg~iVG~~~l~~~ 337 (438)
+.||+++++|.+.+.+++..... ....... ..+. +.... ...|++.. ++++||++.+...
T Consensus 18 l~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l~~~ 97 (194)
T PRK10809 18 LVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANFSNV 97 (194)
T ss_pred EEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEEEee
Confidence 57999999999999999875221 1111100 0111 11111 12455543 5799999998754
Q ss_pred cC--CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 338 FK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 338 ~~--~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.. ...+++ .+.|+|+|||||+|+.+++.+++++.+ .|++++.+.+ .+|.++|+|+||+..+..
T Consensus 98 ~~~~~~~~ei-g~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~~~g~~ 167 (194)
T PRK10809 98 VRGSFHACYL-GYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLARLGFEKEGYA 167 (194)
T ss_pred cCCCeeeEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHHCCCcEEeee
Confidence 32 134566 688999999999999999999999976 6999999988 589999999999987754
|
|
| >cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.2e-09 Score=107.94 Aligned_cols=119 Identities=17% Similarity=0.173 Sum_probs=85.1
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeE-eeeCHHHHHHHhcC-CceEEEcCc-ccCCCCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV-KKVDVTRMRERLDG-GCLVILSNL-GYSSSGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v-~~v~~~~i~~ll~~-g~IPVi~~i-~~~~~g~~~ni 99 (438)
.|++.|.+ |.-+.+.+- +++....+ ....+|+ ..+| .....+.|...+.. +.|||++++ |.+++|++..+
T Consensus 129 ~L~~~Gi~----a~~ld~~~~-i~~~~~~~-~~~~~~~-~a~v~~~~~~~~l~~~l~~~~~v~Vv~GFig~~~~G~~ttL 201 (295)
T cd04259 129 YLEAQGLK----VKWLDAREL-LTATPTLG-GETMNYL-SARCESEYADALLQKRLADGAQLIITQGFIARNAHGETVLL 201 (295)
T ss_pred HHHhCCCC----eEEEcHHHh-eeeccccc-ccccccc-cceehhhhhHHHHHHHHhcCCceeEeCCceeeCCCCCEEEE
Confidence 67777775 777776664 22211111 0001111 1233 23345667766665 679999997 88999998887
Q ss_pred ---ChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCcccccCCHHHHHHHHHhh
Q 013702 100 ---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 ---naD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~i~~l~~~e~~~l~~~g 148 (438)
++|.+|+.+|.+|+|++++++|||+|++ | ++++|++|+.+|+.++...|
T Consensus 202 GrggsD~tA~~lA~~l~A~~l~i~TdV~Gvyt~DP~~~~~a~~i~~ls~~ea~~l~~~G 260 (295)
T cd04259 202 GRGGSDTSAAYFAAKLQAARCEIWTDVPGLFTANPHEVPHARLLKRLDYDEAQEIATMG 260 (295)
T ss_pred CCCChHHHHHHHHHHcCCCEEEEEECCCccccCCCCCCCCCeEeceeCHHHHHHHHHcC
Confidence 6899999999999999999999999883 3 57999999999999997654
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine. |
| >TIGR02075 pyrH_bact uridylate kinase | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.3e-10 Score=106.61 Aligned_cols=117 Identities=21% Similarity=0.206 Sum_probs=89.7
Q ss_pred eCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEec-Ccccc-------CCCcccccCCHH
Q 013702 68 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPILD-------ESGHLIRFLTLQ 139 (438)
Q Consensus 68 v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltd-v~g~~-------~~~~~i~~l~~~ 139 (438)
.+.+.++.+|++|.|||++.. .|. ..+++|.+|+.+|..|+||.|+|+|| |+|++ +++++|++++.+
T Consensus 109 ~~~~~i~~ll~~g~VpV~~g~----~g~-~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~ 183 (233)
T TIGR02075 109 YIRRKAIKHLEKGKVVIFSGG----TGN-PFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYN 183 (233)
T ss_pred cCHHHHHHHHHCCCEEEEECC----CCC-CCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHH
Confidence 347899999999999998743 122 35789999999999999999999999 99883 347899999987
Q ss_pred HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccc
Q 013702 140 EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGG 219 (438)
Q Consensus 140 e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~ 219 (438)
|+.+. +.
T Consensus 184 e~~~~---~~---------------------------------------------------------------------- 190 (233)
T TIGR02075 184 EALKK---NL---------------------------------------------------------------------- 190 (233)
T ss_pred HHHhc---CH----------------------------------------------------------------------
Confidence 75442 21
Q ss_pred cchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 220 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
...++.++..|.+.|++ ++|+|+..++.| ..++.++..||.|.
T Consensus 191 ---------~~~d~~~~~~a~~~~i~-v~i~~g~~~~~l-~~~l~g~~~GT~i~ 233 (233)
T TIGR02075 191 ---------KVMDLTAFALARDNNLP-IVVFNIDEPGAL-KKVILGKGIGTLVS 233 (233)
T ss_pred ---------HHHHHHHHHHHHHCCCe-EEEEeCCCcchH-HHHHCCCCCCEEeC
Confidence 01245566777788986 899999988865 45556677899874
|
This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076. |
| >cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.6e-09 Score=105.22 Aligned_cols=114 Identities=14% Similarity=0.181 Sum_probs=93.8
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeec--
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni-- 99 (438)
.|++.|.+ |.-+++.+-++++....+ ...+.....+.+..+++.+.|||++++ |.+.+|++..+
T Consensus 130 ~L~~~Gi~----a~~ld~~~~~i~t~~~~~---------~a~~~~~~~~~~~~~~~~~~v~Vv~Gf~g~~~~G~~ttLgR 196 (288)
T cd04245 130 YLNYQGID----ARYVIPKDAGLVVTDEPG---------NAQILPESYQKIKKLRDSDEKLVIPGFYGYSKNGDIKTFSR 196 (288)
T ss_pred HHHHCCCC----eEEEcHHHCceeecCCcc---------ccccchhhHHHHHHHHhCCCEEEEeCccccCCCCCEEEcCC
Confidence 56777765 888888887777654432 233444578889999999999999987 88999999999
Q ss_pred -ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHhhh
Q 013702 100 -NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 100 -naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
.+|..|+.+|.+|+|+.+.+.|||+|+ | ++.+.|++||++|+.++...|.
T Consensus 197 ggSD~tAal~A~~l~A~~v~i~tdVdGvytaDPr~v~~A~~i~~lsy~EA~ela~~Ga 254 (288)
T cd04245 197 GGSDITGAILARGFQADLYENFTDVDGIYAANPRIVANPKPISEMTYREMRELSYAGF 254 (288)
T ss_pred CchHHHHHHHHHHcCCCEEEEEeCCCceECCCCCCCCCCeEeCccCHHHHHHHHHCCC
Confidence 899999999999999999999999988 3 4589999999999999975543
|
Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine. |
| >TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.4e-09 Score=107.00 Aligned_cols=79 Identities=16% Similarity=0.166 Sum_probs=68.9
Q ss_pred eeCHHHHHHHhcCCceEEEcCcccCCCCCeeec---ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccC
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 136 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ni---naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l 136 (438)
..+.+.+..+++.|.|||++++..+.+|...++ ++|.+|+.+|.+|+|+.++++|||+|+. ++.++|+++
T Consensus 144 ~~~~~~l~~~l~~g~IpVv~Gf~~~~~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~l 223 (327)
T TIGR02078 144 KRNAKILYEVLESGKIPVIPGFYGNLNGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYL 223 (327)
T ss_pred HhhHHHHHHHHhCCcEEEEeCCccCCCCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEcccc
Confidence 567889999999999999998754778887776 7999999999999999999999999883 346799999
Q ss_pred CHHHHHHHH
Q 013702 137 TLQEADSLI 145 (438)
Q Consensus 137 ~~~e~~~l~ 145 (438)
+.+|+.++.
T Consensus 224 sy~Ea~ela 232 (327)
T TIGR02078 224 SYEEIKIAA 232 (327)
T ss_pred CHHHHHHHH
Confidence 999988764
|
This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between. |
| >TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.4e-09 Score=103.59 Aligned_cols=81 Identities=26% Similarity=0.441 Sum_probs=71.3
Q ss_pred hcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHC
Q 013702 315 ALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSR 393 (438)
Q Consensus 315 ~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~ 393 (438)
.+..++++++++++|||+.+.. ..|.+++|+|+|||+|+|++|++++++++++.|+..+++.| +...+||+++
T Consensus 29 ~~d~~vv~~~~~~lVg~g~l~g------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~~~fy~kl 102 (332)
T TIGR00124 29 PLEIFIAVYEDEEIIGCGGIAG------NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEYAALFEYC 102 (332)
T ss_pred CCCEEEEEEECCEEEEEEEEec------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchHHHHHHHc
Confidence 3456788889999999999852 15889999999999999999999999999999999999999 4567899999
Q ss_pred CCeEecee
Q 013702 394 GFRECSIE 401 (438)
Q Consensus 394 GF~~~g~~ 401 (438)
||.+....
T Consensus 103 GF~~i~~~ 110 (332)
T TIGR00124 103 GFKTLAEA 110 (332)
T ss_pred CCEEeeee
Confidence 99998754
|
ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate. |
| >cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.7e-09 Score=105.47 Aligned_cols=113 Identities=16% Similarity=0.131 Sum_probs=85.1
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeC-HHHHHHHhcC-CceEEEcCc-ccCCCCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDG-GCLVILSNL-GYSSSGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~-~~~i~~ll~~-g~IPVi~~i-~~~~~g~~~ni 99 (438)
.|++.|.+ |.-++..+. +++... ++. ..+.... .+.++.+++. +.|||++++ +.+..|++.++
T Consensus 134 ~L~~~Gi~----a~~ld~~~~-i~t~~~--------~~~-~~~~~~~s~~~~~~~~~~~~~v~Vv~Gfig~~~~G~~ttL 199 (293)
T cd04243 134 YLQEQGLP----AAWLDAREL-LLTDDG--------FLN-AVVDLKLSKERLAQLLAEHGKVVVTQGFIASNEDGETTTL 199 (293)
T ss_pred HHHhCCCC----cEEEcHHHe-EEecCC--------CCc-chhhhHHHHHHHHHHHhcCCCEEEecCccccCCCCCEEEe
Confidence 67777775 777877653 333211 111 1111111 4578888887 899999986 88889999988
Q ss_pred ---ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhh
Q 013702 100 ---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 100 ---naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
++|.+|+.+|.+|+|++++++|||+|++ +++++|++++.+|+.++...|.
T Consensus 200 GRggsD~~A~~~a~~l~a~~~~i~tdvdGiyt~dP~~~~~a~~i~~ls~~ea~~l~~~Ga 259 (293)
T cd04243 200 GRGGSDYSAALLAALLDAEEVEIWTDVDGVYTADPRKVPDARLLKELSYDEAMELAYFGA 259 (293)
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHHhCCC
Confidence 4899999999999999999999999883 3589999999999999976553
|
These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK- |
| >KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.8e-10 Score=99.68 Aligned_cols=140 Identities=18% Similarity=0.199 Sum_probs=106.3
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEE-ECCEEEEEEEEeeec----CCCeEEEEEEEECc
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVE-REGQIIACAALFPFF----KEKCGEVAAIGVSP 352 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~-~dg~iVG~~~l~~~~----~~~~~~I~~v~V~p 352 (438)
+.||.++.+|+-.+..+.-...++.+......-....|.+..||++ .+|+|||++...-.. ++..++|..++|..
T Consensus 2 m~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~r 81 (193)
T KOG3235|consen 2 MNIRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKR 81 (193)
T ss_pred cccccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeehh
Confidence 4689999999888777755455555555545555666777889998 579999999876443 34688999999999
Q ss_pred cccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHH-HCCCeEeceeccchHhhhhhcCCCCceEEEEcc
Q 013702 353 ECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFK-SRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 353 ~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~-k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
.||+.|+|++||....+-..+ .+.+.+.+.+ ..+..+|+ -+||++++.+. .|..+..+.+-|++.
T Consensus 82 s~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve~-------kYYadGedAyaM~~~ 152 (193)
T KOG3235|consen 82 SYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVEP-------KYYADGEDAYAMRKD 152 (193)
T ss_pred hHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEeeccc-------ccccccHHHHHHHHH
Confidence 999999999999998877754 6788888887 36899999 69999988662 344445555555543
|
|
| >cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH) | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.8e-09 Score=103.78 Aligned_cols=112 Identities=16% Similarity=0.176 Sum_probs=86.1
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEee-eCHHHHHHHhcC-CceEEEcCc-ccCCCCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKK-VDVTRMRERLDG-GCLVILSNL-GYSSSGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~-v~~~~i~~ll~~-g~IPVi~~i-~~~~~g~~~ni 99 (438)
.|++.|.+ |.-+.+.+. +++... ++ ...+.. ...+.|+.++.. +.|||++++ +.+.+|++..+
T Consensus 135 ~L~~~Gi~----a~~ld~~~~-i~t~~~--------~~-~a~~~~~~~~~~l~~~~~~~~~v~Vv~Gfig~~~~G~~ttl 200 (294)
T cd04257 135 LLNQQGLD----AAWIDAREL-IVTDGG--------YL-NAVVDIELSKERIKAWFSSNGKVIVVTGFIASNPQGETTTL 200 (294)
T ss_pred HHHhCCCC----eEEEchHHe-eEecCC--------CC-ceEechHhhHHHHHHHHhcCCCEEEecCcccCCCCCCEEEC
Confidence 57777775 888888773 444221 22 233332 336788887777 899999987 77888998877
Q ss_pred ---ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 100 ---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 ---naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
.+|.+|+.+|..|+|+.++++|||+|++ +++++|+.|+.+|+.++...|
T Consensus 201 GRGGSD~~A~~lA~~l~a~~l~i~tdVdGvyt~DP~~~~~A~~i~~is~~ea~~l~~~G 259 (294)
T cd04257 201 GRNGSDYSAAILAALLDADQVEIWTDVDGVYSADPRKVKDARLLPSLSYQEAMELSYFG 259 (294)
T ss_pred CCCchHHHHHHHHHHhCCCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHHHHhCC
Confidence 4899999999999999999999999873 357899999999999996544
|
These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act |
| >PRK14557 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.3e-09 Score=100.94 Aligned_cols=122 Identities=19% Similarity=0.210 Sum_probs=91.2
Q ss_pred eeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeecChHHHHHHHHHHcCCCEEEEE-ecCcccc-------CCCcccccC
Q 013702 66 KKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNCNTYEVATACALAIEADKLICI-IDGPILD-------ESGHLIRFL 136 (438)
Q Consensus 66 ~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ninaD~~A~~lA~aL~A~~li~l-tdv~g~~-------~~~~~i~~l 136 (438)
..++...+...|++|.|||++.. +. -.+.+|++|+.+|.+++||.|+++ |||+|++ +++++|+++
T Consensus 111 ~~~~~~~~~~~l~~g~VvV~~G~~g~------~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i 184 (247)
T PRK14557 111 EPYIRLRAVHHLDNGYIVIFGGGNGQ------PFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKL 184 (247)
T ss_pred chhhHHHHHHHHhCCCEEEEECCcCC------CccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEE
Confidence 34555567777999999999864 32 245699999999999999999999 5999883 358999999
Q ss_pred CHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccccc
Q 013702 137 TLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFA 216 (438)
Q Consensus 137 ~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~ 216 (438)
+..|+. ..+. ++
T Consensus 185 ~~~e~~---~~~~---~~-------------------------------------------------------------- 196 (247)
T PRK14557 185 NYNDVV---RQNI---QV-------------------------------------------------------------- 196 (247)
T ss_pred Chhhhc---ccCH---HH--------------------------------------------------------------
Confidence 977652 1211 00
Q ss_pred ccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCCce
Q 013702 217 IGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 277 (438)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~~ 277 (438)
|- ..++..|.+.|++ ++|+|++.|+.| ..++.++..||.|.+...
T Consensus 197 ------------~~--~~A~~~a~~~gi~-v~I~ng~~~~~l-~~~l~g~~~GT~i~~~~~ 241 (247)
T PRK14557 197 ------------MD--QAALLLARDYNLP-AHVFNFDEPGVM-RRICLGEHVGTLINDDAS 241 (247)
T ss_pred ------------HH--HHHHHHHHHCCCc-EEEEeCCCChHH-HHHHcCCCCcEEEecCcc
Confidence 21 2466778888996 999999999854 566677888999986543
|
|
| >PRK05925 aspartate kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.3e-08 Score=106.07 Aligned_cols=112 Identities=14% Similarity=0.019 Sum_probs=82.8
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeE--eeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV--KKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v--~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni 99 (438)
.|++.|.+ |.-+.+.+- +++.... + ..++ ..+........++.+.|||++++ |.+++|++..+
T Consensus 120 ~L~~~Gi~----a~~ld~~~~-i~t~~~~--------~-~a~~~~~~~~~~~~~~~~~~~~v~Vv~GF~g~~~~G~~ttL 185 (440)
T PRK05925 120 YCCTYVLP----LEFLEARQV-ILTDDQY--------L-RAVPDLALMQTAWHELALQEDAIYIMQGFIGANSSGKTTVL 185 (440)
T ss_pred HHHhCCCC----eEEEcHHHh-EeecCCc--------c-ccccCHHHHHHHHHHhhccCCcEEEecCcceeCCCCCEEEe
Confidence 56666764 777776654 4443221 1 1222 22334444446678889999997 99999998877
Q ss_pred ---ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 100 ---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 ---naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
++|.+|+.+|.+|+|+.++++|||+|++ +++++|++++.+|+.++...|
T Consensus 186 grGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~~~A~~i~~is~~ea~ela~~G 244 (440)
T PRK05925 186 GRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKIIKDAQLIPELSFEEMQNLASFG 244 (440)
T ss_pred ccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCCCCCeEeeEECHHHHHHHHhCC
Confidence 7999999999999999999999999883 357899999999999986544
|
|
| >PRK09034 aspartate kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.2e-08 Score=102.89 Aligned_cols=114 Identities=13% Similarity=0.171 Sum_probs=92.2
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeec--
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNC-- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni-- 99 (438)
.|++.|.+ |.-+++.+-++++.... + ...+.....+.+..++..+.|||++++ |.+.+|++..+
T Consensus 130 ~L~~~g~~----a~~~~~~~~~~~t~~~~--------~-~a~i~~~~~~~~~~~~~~~~v~Vv~GFig~~~~g~~ttlgR 196 (454)
T PRK09034 130 YLNYEGIP----ARYVDPKEAGIIVTDEP--------G-NAQVLPESYDNLKKLRDRDEKLVIPGFFGVTKDGQIVTFSR 196 (454)
T ss_pred HHHhCCCC----cEEEchHHceEEecCCc--------C-ceeEcHhhHHHHHHHHhcCCEEEecCccccCCCCCEEecCC
Confidence 56677765 88888888777764332 2 234445567888888888889999997 88999999888
Q ss_pred -ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHhhh
Q 013702 100 -NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 100 -naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
.+|..|+.+|.+|+|+.+.+.|||+|+ | ++.+++++||.+|+.+|...|.
T Consensus 197 ggSD~tA~~la~~l~A~~~~i~tdV~Gi~taDPr~v~~A~~l~~lsy~Ea~ela~~Ga 254 (454)
T PRK09034 197 GGSDITGAILARGVKADLYENFTDVDGIYAANPRIVKNPKSIKEITYREMRELSYAGF 254 (454)
T ss_pred CcHHHHHHHHHHHcCCCEEEEEecCCccCcCCCCCCCCCeECCccCHHHHHHHHhCCc
Confidence 589999999999999999999999988 3 4689999999999999976554
|
|
| >PRK09084 aspartate kinase III; Validated | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.1e-08 Score=102.77 Aligned_cols=111 Identities=19% Similarity=0.235 Sum_probs=84.7
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeE-----eeeCHHHHHHHhcCCceEEEcCc-ccCCCCCe
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV-----KKVDVTRMRERLDGGCLVILSNL-GYSSSGEV 96 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v-----~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~ 96 (438)
.|+++|.+ |.-+.+.+- +++... |+ .+++ ...-.+.+..+++.+ |||++++ |.++.|++
T Consensus 127 ~L~~~Gi~----a~~l~~~~~-i~t~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~-v~Vv~Gf~g~~~~G~~ 191 (448)
T PRK09084 127 LLRERGVQ----AEWFDVRKV-MRTDDR--------FG-RAEPDVAALAELAQEQLLPLLAEG-VVVTQGFIGSDEKGRT 191 (448)
T ss_pred HHHhCCCC----cEEEchHHe-EEecCC--------CC-cccccHHHHHHHHHHHHHHhhcCC-cEEecCeeecCCCCCE
Confidence 67777775 888887774 444322 11 1222 111225666778888 9999986 88999999
Q ss_pred eec---ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHhh
Q 013702 97 LNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 97 ~ni---naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~g 148 (438)
..+ .+|..|+.+|..|+|+.++++|||+|+ | +++++|++|+++|+.++...|
T Consensus 192 ttLgRggSD~~a~~~a~~l~a~~~~i~tdv~Gi~t~dP~~~~~a~~i~~is~~ea~ela~~G 253 (448)
T PRK09084 192 TTLGRGGSDYSAALLAEALNASRVEIWTDVPGIYTTDPRIVPAAKRIDEISFEEAAEMATFG 253 (448)
T ss_pred eecCCCchHHHHHHHHHHcCCCEEEEEECCCccccCCCCCCCCCeEcccCCHHHHHHHHhCC
Confidence 988 899999999999999999999999987 3 458999999999999996554
|
|
| >COG2153 ElaA Predicted acyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.2e-08 Score=84.59 Aligned_cols=90 Identities=23% Similarity=0.312 Sum_probs=73.0
Q ss_pred hhcCcEEEEEECCEEEEEEEEeeec-CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC-CCEEEEEc-HHHHHHH
Q 013702 314 KALDSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT-TRTADWF 390 (438)
Q Consensus 314 ~~~~~~~V~~~dg~iVG~~~l~~~~-~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g-~~~l~l~t-~~a~~fY 390 (438)
....+.++...|+++++|+.+.+.. ......|+.+.|+|++||+|+|.+||+.+++.+.+.. -+.+++.. ...+.||
T Consensus 47 ~~~~Hl~~~~~~g~LvAyaRLl~~~~~~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fY 126 (155)
T COG2153 47 GDTRHLLGWTPDGELVAYARLLPPGAEYEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFY 126 (155)
T ss_pred cccceEEEEcCCCeEEEEEecCCCCCCcCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHHHHHHHH
Confidence 4446777777799999999998632 2234679999999999999999999999999997654 55677776 4679999
Q ss_pred HHCCCeEeceecc
Q 013702 391 KSRGFRECSIEMI 403 (438)
Q Consensus 391 ~k~GF~~~g~~~l 403 (438)
.++||+.++...+
T Consensus 127 a~~GFv~~~e~yl 139 (155)
T COG2153 127 ASFGFVRVGEEYL 139 (155)
T ss_pred HHhCcEEcCchhh
Confidence 9999999986643
|
|
| >PRK14556 pyrH uridylate kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=3e-08 Score=95.26 Aligned_cols=118 Identities=19% Similarity=0.164 Sum_probs=87.3
Q ss_pred eCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHH
Q 013702 68 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQE 140 (438)
Q Consensus 68 v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e 140 (438)
.+.+.+...|+.|.|||++... | .-.+.+|++|+.+|..++||.|+++|||+|++ ++++++++++..|
T Consensus 124 ~~~~~~~~~l~~g~vvi~~gg~----G-~p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e 198 (249)
T PRK14556 124 ASAHEFNQELAKGRVLIFAGGT----G-NPFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSE 198 (249)
T ss_pred CCHHHHHHHHhCCCEEEEECCC----C-CCcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhh
Confidence 3778888899999999976431 1 12456899999999999999999999999983 3478888888766
Q ss_pred HHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccccccccc
Q 013702 141 ADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQ 220 (438)
Q Consensus 141 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~ 220 (438)
.... +.
T Consensus 199 ~~~~---~l----------------------------------------------------------------------- 204 (249)
T PRK14556 199 VVSK---EL----------------------------------------------------------------------- 204 (249)
T ss_pred hccc---ch-----------------------------------------------------------------------
Confidence 4331 11
Q ss_pred chhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 221 ERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
-..+..++..|.++|++ ++|+|++.++.| ..++.++..||.|..
T Consensus 205 --------~vmd~~A~~~a~~~gIp-i~I~ng~~~~~L-~~~l~Ge~~GT~i~~ 248 (249)
T PRK14556 205 --------NVMDLGAFTQCRDFGIP-IYVFDLTQPNAL-VDAVLDSKYGTWVTL 248 (249)
T ss_pred --------HhHHHHHHHHHHHCCCc-EEEECCCCchHH-HHHHcCCCCceEEEe
Confidence 01123456667788997 899999999865 455567778999864
|
|
| >cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.5e-08 Score=95.07 Aligned_cols=112 Identities=17% Similarity=0.204 Sum_probs=81.0
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeC-----HHHHHHHhcCCceEEEcCc-ccCCCCCe
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-----VTRMRERLDGGCLVILSNL-GYSSSGEV 96 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~-----~~~i~~ll~~g~IPVi~~i-~~~~~g~~ 96 (438)
.|+++|.+ |.-+++.+- +++... ++ ..++.... ...++.+ ..+.|||++++ |.+.+|++
T Consensus 131 ~L~~~Gi~----a~~ld~~~~-i~t~~~--------~~-~a~~~~~~~~~~~~~~~~~~-~~~~v~Vv~Gf~g~~~~G~~ 195 (292)
T cd04258 131 ALREQGVP----AEWFDVRTV-LRTDSR--------FG-RAAPDLNALAELAAKLLKPL-LAGTVVVTQGFIGSTEKGRT 195 (292)
T ss_pred HHHhCCCC----eEEEchHHe-EEecCC--------Cc-cccccHHHHHHHHHHHHHHh-hcCCEEEECCccccCCCCCE
Confidence 56677765 777777665 444221 22 12221111 1223333 45689999986 88889998
Q ss_pred eec---ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHhhh
Q 013702 97 LNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 97 ~ni---naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
..+ ++|..|+.+|.+|+|+.++++|||+|+ | +++++|+.|+++|+.++...|.
T Consensus 196 ttLGrggsD~~a~~~a~~l~a~~~~i~tdv~Gv~~~dP~~~~~a~~i~~isy~Ea~ela~~Ga 258 (292)
T cd04258 196 TTLGRGGSDYSAALLAEALHAEELQIWTDVAGIYTTDPRICPAARAIKEISFAEAAEMATFGA 258 (292)
T ss_pred EecCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEeceeCHHHHHHHHHCCC
Confidence 876 689999999999999999999999987 3 3489999999999999976553
|
AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits. |
| >PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-07 Score=76.47 Aligned_cols=59 Identities=24% Similarity=0.405 Sum_probs=48.3
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEE-Ec--HHHHHHHHHCCCeEecee
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL-LT--TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l-~t--~~a~~fY~k~GF~~~g~~ 401 (438)
+.|..++|+|+|||+|+|+.|+..+.+.+.+.|...... .. ..|+++|+|+||+.....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~~~l~v~~~N~~s~~ly~klGf~~~~~~ 83 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKTPFLYVDADNEASIRLYEKLGFREIEEE 83 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSEEEEEEETT-HHHHHHHHHCT-EEEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHcCCEEEEEE
Confidence 789999999999999999999999999998888765322 22 589999999999998643
|
This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B. |
| >PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=9.2e-08 Score=107.80 Aligned_cols=81 Identities=15% Similarity=0.093 Sum_probs=69.8
Q ss_pred eCHHHHHHHhcCC-ceEEEcCc-ccCCCCCeeec---ChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCccccc
Q 013702 68 VDVTRMRERLDGG-CLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRF 135 (438)
Q Consensus 68 v~~~~i~~ll~~g-~IPVi~~i-~~~~~g~~~ni---naD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~i~~ 135 (438)
.+...++.+++.+ .|||++++ |.+.+|++..+ ++|.+|+.+|.+|+|++++++|||+|+. | +.++|++
T Consensus 177 ~~~~~~~~~~~~~~~v~Vv~Gf~g~~~~g~~ttLgrggsD~~A~~iA~~l~a~~~~i~tdv~Gv~t~dP~~~~~a~~i~~ 256 (861)
T PRK08961 177 SDPALRERFAAQPAQVLITQGFIARNADGGTALLGRGGSDTSAAYFAAKLGASRVEIWTDVPGMFSANPKEVPDARLLTR 256 (861)
T ss_pred hHHHHHHHHhccCCeEEEeCCcceeCCCCCEEEEeCCchHHHHHHHHHHcCCCEEEEEeCCCccccCCCCCCCCceEecc
Confidence 4667888888776 49999987 88999998877 7899999999999999999999999873 3 5689999
Q ss_pred CCHHHHHHHHHhh
Q 013702 136 LTLQEADSLIRQR 148 (438)
Q Consensus 136 l~~~e~~~l~~~g 148 (438)
|+.+|+.++...|
T Consensus 257 ls~~e~~el~~~g 269 (861)
T PRK08961 257 LDYDEAQEIATTG 269 (861)
T ss_pred cCHHHHHHHHHCC
Confidence 9999999997544
|
|
| >PLN02551 aspartokinase | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.2e-07 Score=100.67 Aligned_cols=114 Identities=15% Similarity=0.192 Sum_probs=89.5
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHh-----cCCceEEEcCc-ccC-CCCC
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERL-----DGGCLVILSNL-GYS-SSGE 95 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll-----~~g~IPVi~~i-~~~-~~g~ 95 (438)
.|++.|.+ |.-+.+.+-++++....+ ..+|.....+.|...+ +.+.|||++++ |.+ .+|+
T Consensus 183 ~L~~~Gi~----a~~lda~~~gi~t~~~~~---------~a~i~~~~~~~l~~~l~~~~~~~~~v~Vv~GFig~~~~~G~ 249 (521)
T PLN02551 183 YLNKIGVK----ARQYDAFDIGFITTDDFT---------NADILEATYPAVAKRLHGDWIDDPAVPVVTGFLGKGWKTGA 249 (521)
T ss_pred HHHHCCCC----cEEechHHcceEecCCCC---------ccchhhhhHHHHHHHHHhhhccCCeEEEEcCccccCCCCCc
Confidence 56777765 888888888888744322 2334444555555444 45689999997 888 8999
Q ss_pred eeec---ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHhhh
Q 013702 96 VLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 96 ~~ni---naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
+..+ .+|..|+.+|.+|+|+.+.+.|||+|+ | ++.++|++||++|+.+|..-|.
T Consensus 250 ~ttLGRGGSD~sA~~la~~L~A~~v~I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~elA~~Ga 313 (521)
T PLN02551 250 ITTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAELAYFGA 313 (521)
T ss_pred EEecCCChHHHHHHHHHHHcCCCEEEEEeCCCceeCCCCCCCCCceEecccCHHHHHHHHhCCC
Confidence 9988 589999999999999999999999988 4 4589999999999999976654
|
|
| >PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.2e-07 Score=105.99 Aligned_cols=112 Identities=17% Similarity=0.158 Sum_probs=82.2
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeE-eeeCHHHHHHHh-cCCceEEEcCc-ccCCCCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV-KKVDVTRMRERL-DGGCLVILSNL-GYSSSGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v-~~v~~~~i~~ll-~~g~IPVi~~i-~~~~~g~~~ni 99 (438)
.|++.|.+ |.-++..+- +++.. .|+ ..++ .....+.|+.++ +.+.|||++++ +.+.+|++..+
T Consensus 137 ~L~~~Gi~----a~~ld~~~~-i~t~~--------~~~-~~~~~~~~~~~~i~~~~~~~~~v~Vv~Gfig~~~~G~~ttl 202 (819)
T PRK09436 137 VLEARGHD----VTVIDPREL-LLADG--------HYL-ESTVDIAESTRRIAASFIPADHVILMPGFTAGNEKGELVTL 202 (819)
T ss_pred HHHhCCCC----eEEECHHHe-EEecC--------CCC-CceechHhhHHHHHHHHhcCCcEEEecCcccCCCCCCEEEe
Confidence 56677765 777776553 33321 122 1222 122345566554 56889999987 88889999988
Q ss_pred C---hHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 100 N---TYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 n---aD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
. +|..|+.+|..|+|+.++++|||+|++ ++.++|++++.+|+.++...|
T Consensus 203 GRgGSD~~A~~~A~~l~A~~~~i~tdVdGvyt~DP~~~~~A~~i~~isy~ea~el~~~G 261 (819)
T PRK09436 203 GRNGSDYSAAILAACLDADCCEIWTDVDGVYTADPRVVPDARLLKSLSYQEAMELSYFG 261 (819)
T ss_pred CCCCchHHHHHHHHHcCCCEEEEEECCCceECCCCCCCCCCeEeeEecHHHHHHHHhcC
Confidence 6 899999999999999999999999883 457899999999999996443
|
|
| >KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.4e-07 Score=85.55 Aligned_cols=116 Identities=18% Similarity=0.164 Sum_probs=85.6
Q ss_pred cCHHHHHHHHHHHH-----HcCcC-Cc-CCHHHHHhhcCcEEEEEECC-EEEEEEEEeeecCCC--eEEEEEEEECcccc
Q 013702 286 TDLSGIKQIIQPLV-----ESGAL-VR-RTDEELLKALDSFYVVEREG-QIIACAALFPFFKEK--CGEVAAIGVSPECR 355 (438)
Q Consensus 286 ~D~~~I~~L~~~~~-----~~~~~-~~-~~~e~l~~~~~~~~V~~~dg-~iVG~~~l~~~~~~~--~~~I~~v~V~p~yR 355 (438)
+|++-..+|+..-. +..+. .+ ...+++......++++..++ ++|||..+....+.+ ..++..+-|.+.||
T Consensus 54 ~~ldw~f~L~k~nm~~~Y~qs~~Gw~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR 133 (202)
T KOG2488|consen 54 EDLDWCFSLFKKNMGAMYRQSSWGWDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYR 133 (202)
T ss_pred HHHHHHHHHHHhhhHHHhhhcccccCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhh
Confidence 66666667765521 11111 11 12344444446677777776 899999998655544 67788888999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
|+|||+.||+.++..+.....+.|.+.+ .++..||.++||......
T Consensus 134 ~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~~s 183 (202)
T KOG2488|consen 134 GKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHRLGFVVDEES 183 (202)
T ss_pred ccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHHHHHHcCcccCCCC
Confidence 9999999999999999888888777776 589999999999986544
|
|
| >KOG3397 consensus Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.5e-07 Score=83.75 Aligned_cols=79 Identities=22% Similarity=0.363 Sum_probs=70.0
Q ss_pred EEECCEEEEEEEEeeec-CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 322 VEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 322 ~~~dg~iVG~~~l~~~~-~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
-+...+++|...+.+.. ......+..+.|+.++||+|+|+.||+.++.||+..|.+.+++.|..-.+||+++||+.+..
T Consensus 62 ~E~~~~VigH~rLS~i~n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ~~FYe~lGYe~c~P 141 (225)
T KOG3397|consen 62 NEENDEVLGHSRLSHLPNRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQCRFYESLGYEKCDP 141 (225)
T ss_pred cccccceeeeeccccCCCCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccchhhhhhhcccccCc
Confidence 34567899999998754 34678899999999999999999999999999999999999999976689999999998864
|
|
| >cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.4e-07 Score=90.97 Aligned_cols=71 Identities=21% Similarity=0.247 Sum_probs=62.7
Q ss_pred CCceEEEcCc-ccCCCCCeeec---ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHh
Q 013702 79 GGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 147 (438)
Q Consensus 79 ~g~IPVi~~i-~~~~~g~~~ni---naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~ 147 (438)
.+.|||++++ |.+++|++..+ .+|..|+.+|..|+|+.++++|||+|+ | +++++|++|+.+|+.++...
T Consensus 189 ~~~v~Vv~GFig~~~~G~~ttLGRgGsD~~A~~la~~l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~el~~~ 268 (306)
T cd04247 189 ENRVPVVTGFFGNVPGGLLSQIGRGYTDLCAALCAVGLNADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAELTYY 268 (306)
T ss_pred CCceEEeeccEecCCCCCeEEeCCCchHHHHHHHHHHcCCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHHHHhC
Confidence 5679999997 88888999888 589999999999999999999999988 3 35789999999999999765
Q ss_pred hh
Q 013702 148 RV 149 (438)
Q Consensus 148 g~ 149 (438)
|.
T Consensus 269 Ga 270 (306)
T cd04247 269 GS 270 (306)
T ss_pred cC
Confidence 53
|
Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size. |
| >KOG3138 consensus Predicted N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.7e-08 Score=89.07 Aligned_cols=124 Identities=17% Similarity=0.215 Sum_probs=88.6
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCC---------CeEEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE---------KCGEVAA 347 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~---------~~~~I~~ 347 (438)
.+.++..++.++..+..|.++.++..+...+..+.+ ......-++..++..+|-.+....... ...+|..
T Consensus 16 ~~~l~~it~~nl~~~~~l~~~~fP~~y~~kfy~~~~-~~~~~~~~A~~~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~~ 94 (187)
T KOG3138|consen 16 LIELRLITPNNLKQLKQLNEDIFPISYVDKFYPDVL-SNGDLTQLAYYNEIAVGAVACKLIKFVQNAKRLFGNRVIYILS 94 (187)
T ss_pred ceeeccCCcchHHHHHHHhccccCcchHHHHHHHHH-hcCCHHHhhhhccccccceeeeehhhhhhhhhhhccceeEEEe
Confidence 468999999999999999877766655433222222 111222234444555554444322111 1378999
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHCC-CCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~g-~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+.|.|.||.+|||++|++++.++|.+.. ++.+++.+ ..+..||+++||+.+...
T Consensus 95 Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~ 153 (187)
T KOG3138|consen 95 LGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERL 153 (187)
T ss_pred ecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeecc
Confidence 9999999999999999999999998877 88888877 468999999999998743
|
|
| >COG3393 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.6e-07 Score=88.07 Aligned_cols=78 Identities=22% Similarity=0.320 Sum_probs=65.1
Q ss_pred EEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEE-c--HHHHHHHHHCCCeEe
Q 013702 322 VEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL-T--TRTADWFKSRGFREC 398 (438)
Q Consensus 322 ~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~-t--~~a~~fY~k~GF~~~ 398 (438)
.+.||+||+.+... ...+..+.|..+|++|+||||||++.|+..+....-..|.+.+... + +.|.+.|+|.||+..
T Consensus 182 ~~~d~~iVa~A~t~-a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~riGF~~~ 260 (268)
T COG3393 182 LEGDGKIVAKAETA-AENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRIGFREI 260 (268)
T ss_pred EccCCcEEEeeecc-ccCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCeeEEEEecCCHHHHHHHHHhCCeec
Confidence 34456999999887 3456789999999999999999999999999988888887764433 3 678999999999998
Q ss_pred ce
Q 013702 399 SI 400 (438)
Q Consensus 399 g~ 400 (438)
+.
T Consensus 261 g~ 262 (268)
T COG3393 261 GE 262 (268)
T ss_pred ce
Confidence 74
|
|
| >KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.6e-07 Score=82.49 Aligned_cols=122 Identities=21% Similarity=0.166 Sum_probs=96.5
Q ss_pred EEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEE-CCEEEEEEEEeee--cCCCeEEEEEEEECcccc
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPF--FKEKCGEVAAIGVSPECR 355 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~-dg~iVG~~~l~~~--~~~~~~~I~~v~V~p~yR 355 (438)
++|+.+.+|+...-.+.-+...+.+..+.....+..|...+.+++. +++|.|++.-... .....+++..+.|.|+||
T Consensus 3 t~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~~R 82 (173)
T KOG3234|consen 3 TIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKDTEWHGHVTALTVAPDYR 82 (173)
T ss_pred ccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccCcceeeEEEEEEechhHH
Confidence 5788888887777666666666777777777777788777877765 4689999876422 233578899999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
+.|+|+.||+.+++.....+.-.+-+.+ +-|+.||+++||.....
T Consensus 83 rl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~YR~ 131 (173)
T KOG3234|consen 83 RLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSVYRT 131 (173)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCceEEEe
Confidence 9999999999999999877666655555 57999999999998764
|
|
| >cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.9e-07 Score=65.81 Aligned_cols=62 Identities=34% Similarity=0.483 Sum_probs=54.2
Q ss_pred EEEEECCEEEEEEEEeeecC-CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 013702 320 YVVEREGQIIACAALFPFFK-EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 381 (438)
Q Consensus 320 ~V~~~dg~iVG~~~l~~~~~-~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l 381 (438)
+++..+++++|++.+.+... ...+++..++|+|+|||+|+|++++..+++++.+.++..+.+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGSGGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred EEEecCCEEEEEEEEEecCCCCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 45667899999999986432 478899999999999999999999999999999999988875
|
NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera |
| >COG3981 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.52 E-value=7.9e-07 Score=79.60 Aligned_cols=123 Identities=17% Similarity=0.291 Sum_probs=91.4
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC-------CcCCHHHHHhhc-------------------CcEEEEEECCEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKAL-------------------DSFYVVEREGQIIAC 331 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~-------~~~~~e~l~~~~-------------------~~~~V~~~dg~iVG~ 331 (438)
+.++..+..|..+++++.+.+...+.. ...+.+.++.++ ..+|.+..|+++||+
T Consensus 4 ~~l~~p~L~~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~~~~~~~~~~~~~g~V~~~~y~~v~~d~~ivG~ 83 (174)
T COG3981 4 MKLRRPTLKDKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLEDLTRQEPGNNLPEGWVPASTYWAVDEDGQIVGF 83 (174)
T ss_pred ccccCCchhhHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHHHhccCCCcCCCCCceeceeEEEEecCCcEEEE
Confidence 467777888888888888776544322 111113333332 135566668999999
Q ss_pred EEEeeecCC----CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 332 AALFPFFKE----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 332 ~~l~~~~~~----~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+.+.....+ ..++| ...|.|..||||||+++++.++..|+++|++.+.+.| .+|.+.-+++|=......
T Consensus 84 i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NGGile~~~ 160 (174)
T COG3981 84 INLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEANGGILENEF 160 (174)
T ss_pred EEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhcCCEEeEEE
Confidence 999853321 35677 8899999999999999999999999999999999988 489999999998776654
|
|
| >PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=7.4e-07 Score=99.28 Aligned_cols=112 Identities=20% Similarity=0.235 Sum_probs=87.4
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeE-eeeCHHHHHHHhcCC--ceEEEcCc-ccCCCCCeee
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEV-KKVDVTRMRERLDGG--CLVILSNL-GYSSSGEVLN 98 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v-~~v~~~~i~~ll~~g--~IPVi~~i-~~~~~g~~~n 98 (438)
.|++.|.+ |.-+.+.+ +++.... +...+ .....+.|+.+++.+ .|||++++ |.+++|++..
T Consensus 140 ~L~~~G~~----a~~ld~~~--~i~~~~~---------~~~~i~~~~~~~~l~~~~~~~~~~v~Vv~GF~g~~~~G~~tt 204 (810)
T PRK09466 140 LLNQQGLP----AAWLDARS--FLRAERA---------AQPQVDEGLSYPLLQQLLAQHPGKRLVVTGFISRNEAGETVL 204 (810)
T ss_pred HHHhCCCC----cEEEcHHH--heecCCC---------CCcccchhhhHHHHHHHHhccCCeEEEeeCccccCCCCCEEE
Confidence 66777765 88887766 4543321 12233 233467888888654 89999987 8889999988
Q ss_pred cC---hHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHhhh
Q 013702 99 CN---TYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 99 in---aD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
+. +|..|+.+|.+|+|+.+.+.|||+|+ | ++.++|++||++|+.+|...|.
T Consensus 205 LGRGGSD~tA~~la~~l~A~~v~i~tDV~Gi~taDPr~v~~A~~i~~isy~Ea~ela~~Ga 265 (810)
T PRK09466 205 LGRNGSDYSATLIGALAGVERVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAA 265 (810)
T ss_pred cCCChHHHHHHHHHHHcCCCEEEEEeCCCccccCCcccCCCceEcccCCHHHHHHHHHcCc
Confidence 84 89999999999999999999999988 3 4589999999999999987664
|
|
| >COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.7e-06 Score=76.59 Aligned_cols=123 Identities=21% Similarity=0.222 Sum_probs=85.5
Q ss_pred EEEECCccCHHHHHHHHHHHHHcCcC--C-----cCCHHHHHhhc---------CcEEEEEE-C--CEEEEEEEEeeecC
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESGAL--V-----RRTDEELLKAL---------DSFYVVER-E--GQIIACAALFPFFK 339 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~~~--~-----~~~~e~l~~~~---------~~~~V~~~-d--g~iVG~~~l~~~~~ 339 (438)
.+|+....|+..+..+........+. . ....+.+...+ ..+.+... + +++||++.+.....
T Consensus 11 ~lr~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~ 90 (187)
T COG1670 11 LLREVDLEDLELLAEWANDPEVMLFWWLPPPLTPPTSDEELLRLLAEAWEDLGGGAFAIELKATGDGELIGVIGLSDIDR 90 (187)
T ss_pred EeecCcHhHHHHHHHHhcChHhhcccCCCCCcccccchHHHHHHHHHHHhhcCCceEEEEEEeCCCCeEEEEEEEEEecc
Confidence 34677888888888555332222111 1 12222322222 12233322 2 48999999986552
Q ss_pred ---CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 340 ---EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 340 ---~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
...+++ .+.++|+|||+|+|+..++.+++++-. .++.++.+.+ .+++++++|+||+..+...
T Consensus 91 ~~~~~~~~i-g~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf~~eg~~~ 160 (187)
T COG1670 91 AANGDLAEI-GYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGFRLEGELR 160 (187)
T ss_pred ccccceEEE-EEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCChhhhhhh
Confidence 566777 677799999999999999999999955 8999999888 5899999999999988653
|
|
| >TIGR01211 ELP3 histone acetyltransferase, ELP3 family | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-06 Score=93.31 Aligned_cols=84 Identities=17% Similarity=0.265 Sum_probs=65.5
Q ss_pred cEEEEEE---CCEEEEEEEEeeecC-------CCeEEEEEEE-----------ECccccCCcHHHHHHHHHHHHHHHCCC
Q 013702 318 SFYVVER---EGQIIACAALFPFFK-------EKCGEVAAIG-----------VSPECRGQGQGDKLLDYIEKKAASLGL 376 (438)
Q Consensus 318 ~~~V~~~---dg~iVG~~~l~~~~~-------~~~~~I~~v~-----------V~p~yRgqGiG~~Ll~~l~~~a~~~g~ 376 (438)
.+|+.+. ++.++||+.+..... ...+.|..+. ++|+|||+|+|++||++++++|++.|+
T Consensus 412 e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G~ 491 (522)
T TIGR01211 412 EFFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEGS 491 (522)
T ss_pred eEEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCCC
Confidence 3455555 478999999884321 1244455444 359999999999999999999999999
Q ss_pred CEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 377 DMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 377 ~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
+.+.+.+ ..+.+||+|+||+..+..
T Consensus 492 ~~i~v~s~~~A~~FY~klGf~~~g~y 517 (522)
T TIGR01211 492 EKILVISGIGVREYYRKLGYELDGPY 517 (522)
T ss_pred CEEEEeeCchHHHHHHHCCCEEEcce
Confidence 9999876 589999999999987543
|
The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases. |
| >PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.1e-06 Score=66.39 Aligned_cols=70 Identities=24% Similarity=0.307 Sum_probs=57.4
Q ss_pred EEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHC
Q 013702 321 VVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 393 (438)
Q Consensus 321 V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~ 393 (438)
.+..||+.+|++.+.. +++...|....|.|++||||+|++|++.+++++++.|.+ |...|+-+.+|++++
T Consensus 3 ~~~~~g~~~a~l~Y~~--~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~k-v~p~C~y~~~~~~~h 72 (78)
T PF14542_consen 3 ELKDDGEEIAELTYRE--DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLK-VVPTCSYVAKYFRRH 72 (78)
T ss_dssp EEESSTTEEEEEEEEE--SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-E-EEETSHHHHHHHHH-
T ss_pred EEEECCEEEEEEEEEe--CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCE-EEEECHHHHHHHHhC
Confidence 3455688999999863 678999999999999999999999999999999998854 456677778888875
|
|
| >COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.5e-06 Score=74.06 Aligned_cols=128 Identities=19% Similarity=0.197 Sum_probs=93.0
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEee----ec----------CCC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFP----FF----------KEK 341 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~----~~----------~~~ 341 (438)
+.+.++.....|..+++.|.++...+-. ....+.+.......+++..+|.+-||..-.. +. .++
T Consensus 6 mp~~~~D~~apd~aavLaLNNeha~els--wLe~erL~~l~~eAF~ArR~G~l~afl~tFd~~a~ydSpNFlWFrErYe~ 83 (167)
T COG3818 6 MPILIRDVRAPDLAAVLALNNEHALELS--WLELERLYRLYKEAFVARRDGNLAAFLVTFDSSARYDSPNFLWFRERYEN 83 (167)
T ss_pred cceehhhhcCCchhhHHhccchhhhhcc--ccCHHHHHHHHHHHHHHhhccchhhheeeccccccCCCCceeehhhhCCc
Confidence 4456777777888888888665443322 2233444333333356777777666654321 11 236
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHHCCCeEeceeccch
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIEMIPE 405 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t------~~a~~fY~k~GF~~~g~~~lp~ 405 (438)
..++..+.|....||+|.|++|...+.++++..|+..+.+++ +.+-.|.-.+||.++|...+..
T Consensus 84 F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a~ihg 153 (167)
T COG3818 84 FFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQATIHG 153 (167)
T ss_pred eEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccceEEec
Confidence 778999999999999999999999999999999999999988 3678888999999999776553
|
|
| >PRK09181 aspartate kinase; Validated | Back alignment and domain information |
|---|
Probab=98.22 E-value=1e-05 Score=85.22 Aligned_cols=80 Identities=16% Similarity=0.096 Sum_probs=67.3
Q ss_pred HHHHHHHhc----CCceEEEcCcccCCCCCeeec---ChHHHHHHHHHHcCCCEEEEEecCccc--c------CCCcccc
Q 013702 70 VTRMRERLD----GGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL--D------ESGHLIR 134 (438)
Q Consensus 70 ~~~i~~ll~----~g~IPVi~~i~~~~~g~~~ni---naD~~A~~lA~aL~A~~li~ltdv~g~--~------~~~~~i~ 134 (438)
.+.|...++ .+.|||+++++.+.+|++..+ .+|..|+.||.+|+|+.+.+.|||+.. | ++.++|+
T Consensus 182 ~~~i~~~l~~~~~~~~v~Vv~GF~~~~~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~I~taDPriV~~~~A~~i~ 261 (475)
T PRK09181 182 DERIKKAFKDIDVTKELPIVTGYAKCKEGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYHLSSADPKLVGEDKVVPIG 261 (475)
T ss_pred HHHHHHHHhhhccCCcEEEecCCcCCCCCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCccccCCCCcCCCCCCeEcC
Confidence 566777666 478999999876778999888 589999999999999999999999722 3 3678999
Q ss_pred cCCHHHHHHHHHhhh
Q 013702 135 FLTLQEADSLIRQRV 149 (438)
Q Consensus 135 ~l~~~e~~~l~~~g~ 149 (438)
+||++|+.+|...|.
T Consensus 262 ~lsy~Ea~ELA~~GA 276 (475)
T PRK09181 262 RTNYDVADQLANLGM 276 (475)
T ss_pred ccCHHHHHHHHHcCc
Confidence 999999999976664
|
|
| >PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.5e-05 Score=72.51 Aligned_cols=86 Identities=21% Similarity=0.325 Sum_probs=60.3
Q ss_pred CcEEEEEECC--EEEEEEEEeeec------------------------------------CCCeEEEEEEEECccccCCc
Q 013702 317 DSFYVVEREG--QIIACAALFPFF------------------------------------KEKCGEVAAIGVSPECRGQG 358 (438)
Q Consensus 317 ~~~~V~~~dg--~iVG~~~l~~~~------------------------------------~~~~~~I~~v~V~p~yRgqG 358 (438)
...|+...++ +++|++.+.... .-..+.|-.++|+|++|++|
T Consensus 27 h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRIAvhP~~q~~G 106 (196)
T PF13718_consen 27 HRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRIAVHPDLQRMG 106 (196)
T ss_dssp EEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEEEE-CCC-SSS
T ss_pred ceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEEEEChhhhcCC
Confidence 4578888888 999999875211 01456788999999999999
Q ss_pred HHHHHHHHHHHHH-------------------------HHCCCCEEEEEc---HHHHHHHHHCCCeEeceec
Q 013702 359 QGDKLLDYIEKKA-------------------------ASLGLDMLFLLT---TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 359 iG~~Ll~~l~~~a-------------------------~~~g~~~l~l~t---~~a~~fY~k~GF~~~g~~~ 402 (438)
||+++++.+++++ +..++.++-+.- ..-.+||.|+||..+....
T Consensus 107 ~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~t~~Ll~FW~k~gf~pv~l~~ 178 (196)
T PF13718_consen 107 YGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGATPELLKFWQKNGFVPVYLGQ 178 (196)
T ss_dssp HHHHHHHHHHHT-----------------------------S-SEEEEEEE--HHHHHHHHCTT-EEEEE-S
T ss_pred HHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCCCHHHHHHHHHCCcEEEEEec
Confidence 9999999999999 466777764433 5789999999999987653
|
|
| >cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.3e-05 Score=77.36 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=65.1
Q ss_pred HHHHHHhc----CCceEEEcCcccCCCCCeeec---ChHHHHHHHHHHcCCCEEEEEecCccc--c------CCCccccc
Q 013702 71 TRMRERLD----GGCLVILSNLGYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL--D------ESGHLIRF 135 (438)
Q Consensus 71 ~~i~~ll~----~g~IPVi~~i~~~~~g~~~ni---naD~~A~~lA~aL~A~~li~ltdv~g~--~------~~~~~i~~ 135 (438)
+.|...++ .+.|||+++++.+.+|++..+ .+|..|+.||.+|+|+.+.+.|||+.. | ++.+.|++
T Consensus 177 ~~i~~~~~~~~~~~~v~IvtGF~~~~~G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~i~taDPriV~~~~A~~i~~ 256 (304)
T cd04248 177 ERISEAFRDIDPRDELPIVTGYAKCAEGLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFHLSSADPKLVGEDKARPIGR 256 (304)
T ss_pred HHHHHHHHhhccCCcEEEeCCccCCCCCCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCceecCCCCccCCCCceEeCc
Confidence 45555444 578999999977778999888 489999999999999999999999722 3 35689999
Q ss_pred CCHHHHHHHHHhhh
Q 013702 136 LTLQEADSLIRQRV 149 (438)
Q Consensus 136 l~~~e~~~l~~~g~ 149 (438)
+|++|+.+|..-|.
T Consensus 257 lsY~EA~ELA~~Ga 270 (304)
T cd04248 257 TNYDVADQLANLGM 270 (304)
T ss_pred cCHHHHHHHHHcCh
Confidence 99999999976654
|
Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon. |
| >COG3053 CitC Citrate lyase synthetase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.3e-05 Score=74.54 Aligned_cols=111 Identities=23% Similarity=0.318 Sum_probs=87.9
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEEC-CEEEEEEEEeeecCCCeEEEEEEEECcccc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFKEKCGEVAAIGVSPECR 355 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~d-g~iVG~~~l~~~~~~~~~~I~~v~V~p~yR 355 (438)
++.+..+...|...+...-.-+...+.. +...++.+.+++.+ +++|+|.++.- -.|.|++|+|.+|
T Consensus 3 ~~~~~~v~~~e~~k~~~i~~fL~~~~l~-------~d~~ve~~v~~~~~~~~iiacGsiaG------nvikcvAvs~s~q 69 (352)
T COG3053 3 NYTFSRVKRSEKKKMAEIAEFLHQNDLR-------VDTTVEYFVAIYRDNEEIIACGSIAG------NVIKCVAVSESLQ 69 (352)
T ss_pred ceEEEEEccchhhHHHHHHHHHhhcCce-------ecccceEEEEEEcCCCcEEEeccccc------ceeEEEEechhcc
Confidence 3567777778877777765555555432 22344556666655 99999998862 2588999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEece
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 400 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~ 400 (438)
|-|+.-+|+.++++++-++|...+|+.| +....||+.+||.+...
T Consensus 70 GeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk~~GF~~i~~ 115 (352)
T COG3053 70 GEGLALKLVTELINLAYERGRTHLFIYTKPEYAALFKQCGFSEIAS 115 (352)
T ss_pred cccHHHHHHHHHHHHHHHcCCceEEEEechhHHHHHHhCCceEeec
Confidence 9999999999999999999999999999 67899999999998753
|
|
| >PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.0001 Score=71.73 Aligned_cols=118 Identities=15% Similarity=0.119 Sum_probs=76.6
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccC
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 356 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRg 356 (438)
+.|++++++.+.... ...+...+. .-.+.+++.+. ..-+++..+++||+-|.-. +...+..+| .+.++|+|||
T Consensus 129 y~l~~Ide~l~~~~~---~e~~s~d~~~~~~s~e~Fl~~-G~Gf~i~~~~~iVs~~~s~-~~~~~~~EI-~I~T~~~yR~ 202 (265)
T PF12746_consen 129 YELKRIDEELYENSL---EEEWSEDLVSQFSSYEDFLKN-GFGFCILHDGEIVSGCSSY-FVYENGIEI-DIETHPEYRG 202 (265)
T ss_dssp CEEEE--HHHHHHHH---HSCCCGGGTTTSSSHHHHHHH---EEEEEETTEEEEEEEEE-EEETTEEEE-EEEE-CCCTT
T ss_pred eEEEECCHHHHHhhh---hhHhHHHHHHhcCCHHHHHhc-CcEEEEEECCEEEEEEEEE-EEECCEEEE-EEEECHHhhc
Confidence 457777665444332 111112222 22356666544 5677888899988755444 234567899 8999999999
Q ss_pred CcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 357 QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 357 qGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
||+|+.+...++..|.++|+...+-.. .++.++=+|+||+.....
T Consensus 203 kGLA~~~aa~~I~~Cl~~~l~P~WDc~N~~S~~lA~kLGf~~~~~Y 248 (265)
T PF12746_consen 203 KGLATAVAAAFILECLENGLYPSWDCHNLASIALAEKLGFHFDFEY 248 (265)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEE-EESSHHHHHHHHHCT--EEEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCcCeeCCCHHHHHHHHHcCCccccee
Confidence 999999999999999999988865433 689999999999987654
|
|
| >COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0001 Score=69.63 Aligned_cols=73 Identities=23% Similarity=0.146 Sum_probs=57.6
Q ss_pred eCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEec-Cccc-------cCCCcccccCCHH
Q 013702 68 VDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIID-GPIL-------DESGHLIRFLTLQ 139 (438)
Q Consensus 68 v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltd-v~g~-------~~~~~~i~~l~~~ 139 (438)
.+.....+.|+.|.|+|.+.- .|+.+ -..|++|+..|..++||-|+..|+ |+|+ ||+++.+++||++
T Consensus 113 ~~~~~A~~~l~~grVvIf~gG----tg~P~-fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~ 187 (238)
T COG0528 113 YSRREAIRHLEKGRVVIFGGG----TGNPG-FTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYD 187 (238)
T ss_pred cCHHHHHHHHHcCCEEEEeCC----CCCCC-CchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHH
Confidence 456677778899999998742 12222 345999999999999999999995 9988 3568999999999
Q ss_pred HHHHHH
Q 013702 140 EADSLI 145 (438)
Q Consensus 140 e~~~l~ 145 (438)
|+.+..
T Consensus 188 e~l~~~ 193 (238)
T COG0528 188 EVLKIG 193 (238)
T ss_pred HHHHhc
Confidence 987763
|
|
| >PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00016 Score=62.14 Aligned_cols=103 Identities=16% Similarity=0.241 Sum_probs=65.1
Q ss_pred CCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcH
Q 013702 283 AKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 359 (438)
Q Consensus 283 at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGi 359 (438)
++++|.-++.++| ...+.+.+.+++ ..+|++..|++++|-+.+.. +...+.|..++|.+--|++|+
T Consensus 10 ls~Qd~iDL~KIw---------p~~~~~~l~~~l~~~~~l~aArFNdRlLgAv~v~~--~~~~~~L~~l~VRevTRrRGV 78 (128)
T PF12568_consen 10 LSEQDRIDLAKIW---------PQQDPEQLEQWLDEGHRLFAARFNDRLLGAVKVTI--SGQQAELSDLCVREVTRRRGV 78 (128)
T ss_dssp --HHHHHHHHHH----------TTS----------SSEEEEEEEETTEEEEEEEEEE--ETTEEEEEEEEE-TT-SSSSH
T ss_pred CCHHHHHHHHHhC---------CCCCHHHHHHHhccCCeEEEEEechheeeeEEEEE--cCcceEEeeEEEeeccccccH
Confidence 4455666666664 222334454444 46889999999999999873 467999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEc--------HHHHHHHHHCCCeEe
Q 013702 360 GDKLLDYIEKKAASLGLDMLFLLT--------TRTADWFKSRGFREC 398 (438)
Q Consensus 360 G~~Ll~~l~~~a~~~g~~~l~l~t--------~~a~~fY~k~GF~~~ 398 (438)
|+.|++.+.+.+ ..++...+.. .....|...+||...
T Consensus 79 G~yLlee~~rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~ 123 (128)
T PF12568_consen 79 GLYLLEEVLRQL--PDIKHWWLADEGVEPQDRAVMAAFMQACGFSAQ 123 (128)
T ss_dssp HHHHHHHHHHHS---S--EEEE--TT-S--THHHHHHHHHHHT-EE-
T ss_pred HHHHHHHHHHHC--CCCcEEEEecCCCcccchHHHHHHHHHcCcccc
Confidence 999999999888 3445544433 235689999999764
|
It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A. |
| >KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=7e-06 Score=71.99 Aligned_cols=121 Identities=14% Similarity=0.100 Sum_probs=79.1
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCC-cC-CHHHHHhhc------Cc-------EEEEEECCEEEEEEEEeeecC-
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALV-RR-TDEELLKAL------DS-------FYVVEREGQIIACAALFPFFK- 339 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~-~~-~~e~l~~~~------~~-------~~V~~~dg~iVG~~~l~~~~~- 339 (438)
..+.|||..++|...+..|-. ..|+. .+ +.+-+...+ .. -+.-...+.+||++.-...+.
T Consensus 10 ~~~~irp~i~e~~q~~~~Lea----~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~~E 85 (190)
T KOG4144|consen 10 EAPRIRPGIPESCQRRHTLEA----SEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWDKE 85 (190)
T ss_pred ccccCCCCChHHHHHHhcccc----ccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhhhhccccceehhhcccCcch
Confidence 445799999999888887733 33321 11 112221111 00 011122578999887543221
Q ss_pred -------------CCeEEEEEEEECccccCCcHHHHHHHHHHHH-HHHCCCCEEEEEc-HHHHHHHHHCCCeEece
Q 013702 340 -------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKK-AASLGLDMLFLLT-TRTADWFKSRGFRECSI 400 (438)
Q Consensus 340 -------------~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~-a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~ 400 (438)
.....|+.++|+|+||.||+|..|+..-++. +.+.-.+++.+-+ .+...||+++||+.+++
T Consensus 86 ~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvPFYEr~gFk~vgp 161 (190)
T KOG4144|consen 86 RLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVPFYERFGFKAVGP 161 (190)
T ss_pred hhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccchhHhcCceeecc
Confidence 2457899999999999999999999885544 4554455666666 57899999999999986
|
|
| >COG2388 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00013 Score=60.33 Aligned_cols=63 Identities=29% Similarity=0.381 Sum_probs=55.3
Q ss_pred CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEE
Q 013702 317 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 380 (438)
Q Consensus 317 ~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~ 380 (438)
..+|+...+|+.+|.+..++ ..++...|.+-+|.+++||||+|++|+..+++.+++.|.+-+=
T Consensus 15 ~~~y~~~~~G~~~~e~~y~~-~~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kiiP 77 (99)
T COG2388 15 NGRYVLTDEGEVIGEATYYD-RGENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKIIP 77 (99)
T ss_pred ceEEEEecCCcEEEEEEEec-CCCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEcc
Confidence 45788888999999999884 4568899999999999999999999999999999999875543
|
|
| >COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00043 Score=75.75 Aligned_cols=60 Identities=25% Similarity=0.356 Sum_probs=50.8
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHHCCCeEecee
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k~GF~~~g~~ 401 (438)
..+.|-.++|||++|++|||++|++.++++++ .++.++-+.- ....+||.|+||.++...
T Consensus 530 ~G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rnGF~pVhls 592 (758)
T COG1444 530 VGWRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRNGFVPVHLS 592 (758)
T ss_pred ceeeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccCCCHHHHHHHHHcCeEEEEec
Confidence 34578899999999999999999999999997 5677764433 678999999999998754
|
|
| >PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00031 Score=70.45 Aligned_cols=147 Identities=16% Similarity=0.217 Sum_probs=78.0
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc------------------CcEEEEEE--CCEEEEEEEEee
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------------------DSFYVVER--EGQIIACAALFP 336 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~------------------~~~~V~~~--dg~iVG~~~l~~ 336 (438)
|+.|||++.+|+++|.+|-...-.--...|.+++.+.+.+ .+++|.++ .|+|+|++++..
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a 80 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEA 80 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEES
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEe
Confidence 4689999999999999996654322122344444433322 13567775 489999999851
Q ss_pred e-----------------------------------cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH---CCCCE
Q 013702 337 F-----------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS---LGLDM 378 (438)
Q Consensus 337 ~-----------------------------------~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~---~g~~~ 378 (438)
. +-.+..+|+.++++|+||+.|.|+.|-+.-.-++.+ +-.++
T Consensus 81 ~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~~~ 160 (342)
T PF04958_consen 81 AVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFADR 160 (342)
T ss_dssp STTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-SE
T ss_pred ccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcchh
Confidence 0 012667999999999999999999998877666644 44566
Q ss_pred EEEEc------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCC
Q 013702 379 LFLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427 (438)
Q Consensus 379 l~l~t------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~ 427 (438)
++.+- ...-.||+.+|=+..+.+. + +..|-..-.+|-|+..|+|.
T Consensus 161 viAElrG~~De~G~SPFWdalG~~FF~mdF-~---eAD~Lsg~~~k~FIaeLMP~ 211 (342)
T PF04958_consen 161 VIAELRGVSDEDGRSPFWDALGRHFFDMDF-Q---EADYLSGIGNKQFIAELMPR 211 (342)
T ss_dssp EEEE--B---TT---HHHHHTGGGTS---H-H---HHHHHHHH------------
T ss_pred eeeeccCCcCCCCCCchHHHhhccccCCCH-H---HHHHHHcCCcchHHHHhCCC
Confidence 76655 3557899998866554431 1 12222233678888888874
|
This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A. |
| >PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2 | Back alignment and domain information |
|---|
Probab=97.68 E-value=9.5e-05 Score=67.34 Aligned_cols=132 Identities=18% Similarity=0.252 Sum_probs=81.5
Q ss_pred eeeehhhcCCCcccccCCceeEE-EECCcc-CHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEe
Q 013702 258 LLLELFKRDGMGTMVASDLYEGT-RTAKVT-DLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 335 (438)
Q Consensus 258 ll~el~~~~g~GT~i~~d~~~~I-R~at~~-D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~ 335 (438)
|..||||+.|.||.|.+...+.. ...+.- |.+.+.+++...+..........+.+... .+-++.++..-|.+.+.
T Consensus 2 L~kELFt~sgagTlirrG~~i~~~~s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~---~~~iy~d~~y~~~AIVt 78 (170)
T PF04768_consen 2 LQKELFTDSGAGTLIRRGYKILKHSSLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNR---LFKIYVDEDYEGAAIVT 78 (170)
T ss_dssp HHHHHHSSSTSSEEEE----EEEESSCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS----SEEEEETTSSEEEEEE
T ss_pred ccchhcCCCCCceEEecCeeeEEecCccccCCHHHHHHHHHhcccccccHHHHHHHhhcc---ceEEEEeCCceEEEEEE
Confidence 45799999999999998765443 334444 89999999887763322222233333322 33333345555555554
Q ss_pred e---ecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHH--CCCeE
Q 013702 336 P---FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKS--RGFRE 397 (438)
Q Consensus 336 ~---~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k--~GF~~ 397 (438)
+ ......++|..++|.|..||.|++..++..+.+.. +.++..+ ++..+||-+ -|+-.
T Consensus 79 ~e~~~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~-----p~L~Wrsr~~n~~~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 79 PEGPDSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDF-----PKLFWRSREDNPNNKWYFERSDGSFK 143 (170)
T ss_dssp EE-SCTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH------SSEEEEEETT-TTHHHHHHH-SEEEE
T ss_pred ecCCCCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhc-----cceEEEecCCCCcccEEEEeeEEEEE
Confidence 3 23446999999999999999999999999986443 2255555 567788844 46554
|
7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A. |
| >COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=5.8e-05 Score=68.21 Aligned_cols=69 Identities=10% Similarity=0.091 Sum_probs=53.9
Q ss_pred HHhcCCceEEEcCcc----cCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc---CCCcccccCCHHHHHH
Q 013702 75 ERLDGGCLVILSNLG----YSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---ESGHLIRFLTLQEADS 143 (438)
Q Consensus 75 ~ll~~g~IPVi~~i~----~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~---~~~~~i~~l~~~e~~~ 143 (438)
.-...+.+||+=|-. .|+--...-|-+|.+|..||+.++|.++++.|||+|+. ++++++++|+..|++.
T Consensus 88 ~~i~~~~~aVLLPyrlLr~~DplpHSW~VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~~~kLv~eI~A~dl~~ 163 (212)
T COG2054 88 DGIKPDAKAVLLPYRLLRKTDPLPHSWEVTSDSISVWIAAKAGATEVVKATDVDGIYEEDPKGKLVREIRASDLKT 163 (212)
T ss_pred hccCcccceEeeehHhhhcCCCCCcceeecccHHHHHHHHHcCCcEEEEEecCCcccccCCcchhhhhhhHhhccc
Confidence 344566778876642 35555567788999999999999999999999999984 4578999888777654
|
|
| >COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00015 Score=71.84 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=71.1
Q ss_pred CcEEEEEECCEEEEEEEEeeec---C---CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHH
Q 013702 317 DSFYVVEREGQIIACAALFPFF---K---EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 390 (438)
Q Consensus 317 ~~~~V~~~dg~iVG~~~l~~~~---~---~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY 390 (438)
..++|++++.++++.....|+. . -..+.|..+++.|+|||+|.-++||.+.++..+..|+...+|. +-+.+||
T Consensus 39 ~n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~-P~s~~iY 117 (389)
T COG4552 39 PNSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALH-PFSGGIY 117 (389)
T ss_pred CcceEEeehhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEec-cCchhhH
Confidence 5789999999999988876532 1 2567899999999999999999999999999999999887775 4578999
Q ss_pred HHCCCeEece
Q 013702 391 KSRGFRECSI 400 (438)
Q Consensus 391 ~k~GF~~~g~ 400 (438)
+|+||+..+.
T Consensus 118 rKfGye~asn 127 (389)
T COG4552 118 RKFGYEYASN 127 (389)
T ss_pred hhccccccce
Confidence 9999998874
|
|
| >PRK10456 arginine succinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00059 Score=68.25 Aligned_cols=147 Identities=17% Similarity=0.180 Sum_probs=96.0
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----------------CcEEEEEE--CCEEEEEEEEeee-
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFPF- 337 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----------------~~~~V~~~--dg~iVG~~~l~~~- 337 (438)
|+.|||++..|+++|++|-...-.--...|.+++.+.+.+ .+++|.++ .|++||++++...
T Consensus 1 M~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~v 80 (344)
T PRK10456 1 MMVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAV 80 (344)
T ss_pred CeEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEecc
Confidence 3679999999999999995443211122444444443332 24567775 4899999997520
Q ss_pred ----------------------------------cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH---CCCCEEE
Q 013702 338 ----------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS---LGLDMLF 380 (438)
Q Consensus 338 ----------------------------------~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~---~g~~~l~ 380 (438)
+-.+..+|+.++++|+||+.|.|+.|-+.-.-++.+ +-.++++
T Consensus 81 G~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~vi 160 (344)
T PRK10456 81 GLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV 160 (344)
T ss_pred cCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhhhhhhh
Confidence 001566899999999999999999888766555533 3344555
Q ss_pred EEc------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCC
Q 013702 381 LLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427 (438)
Q Consensus 381 l~t------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~ 427 (438)
.+- ...-.||+.+|=+..+.+ + .+..|-..-.+|.|+..|+|.
T Consensus 161 AEmRG~~De~G~SPFWd~lg~hFF~md-F---~eAD~Lsg~~~k~FIaeLMP~ 209 (344)
T PRK10456 161 AEMRGVIDEHGYSPFWQSLGKRFFSMD-F---SRADYLCGTGQKAFIAELMPK 209 (344)
T ss_pred eeccCccCCCCCCccHHHhhccccCCC-H---HHHHHHhcCCCceeHHHHCCC
Confidence 443 244579998887765544 1 123333345688899888875
|
|
| >PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0019 Score=59.60 Aligned_cols=115 Identities=16% Similarity=0.156 Sum_probs=79.5
Q ss_pred ccCHHHHHHHHHHHHHcCcC--C----cCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecC-------------------
Q 013702 285 VTDLSGIKQIIQPLVESGAL--V----RRTDEELLKALDSFYVVEREGQIIACAALFPFFK------------------- 339 (438)
Q Consensus 285 ~~D~~~I~~L~~~~~~~~~~--~----~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~------------------- 339 (438)
.++++++.++....+.+... . ....+++...-..+.++.++|+++||+.+.|...
T Consensus 7 ~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~ 86 (182)
T PF00765_consen 7 RRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPR 86 (182)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---S
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCCC
Confidence 45567777777776655431 1 1123333332234566678899999999985321
Q ss_pred -CCeEEEEEEEECccccC------CcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 340 -EKCGEVAAIGVSPECRG------QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 340 -~~~~~I~~v~V~p~yRg------qGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
++.+|+..++|+|+.++ .-+...|+..+.++|.++|++.+...+ ....++|++.||....
T Consensus 87 ~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~~v~V~~~~~~r~l~r~G~~~~~ 154 (182)
T PF00765_consen 87 SPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRHIVGVVDPAMERILRRAGWPVRR 154 (182)
T ss_dssp STTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SEEEEEEEHHHHHHHHHCT-EEEE
T ss_pred CCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCEEEEEEChHHHHHHHHcCCceEE
Confidence 37899999999998532 247889999999999999999998877 6789999999999764
|
Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A. |
| >TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0046 Score=59.64 Aligned_cols=121 Identities=15% Similarity=0.124 Sum_probs=83.9
Q ss_pred eeEEEECCcc-CHHHHHHHHHHHHHcCcCCc--------CCHHHHHhhcCcEEEEEE--CCEEEEEEEEeee--------
Q 013702 277 YEGTRTAKVT-DLSGIKQIIQPLVESGALVR--------RTDEELLKALDSFYVVER--EGQIIACAALFPF-------- 337 (438)
Q Consensus 277 ~~~IR~at~~-D~~~I~~L~~~~~~~~~~~~--------~~~e~l~~~~~~~~V~~~--dg~iVG~~~l~~~-------- 337 (438)
++.++.+... ++.++.++....+.+...-+ ...+++.. ...++++.+ ++++|||+.+.+.
T Consensus 7 ~~~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D~-~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~ 85 (241)
T TIGR03694 7 YFEIIPAVTPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYDA-HSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQP 85 (241)
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCC-CCcEEEEEECCCCCEEEEEEEecccccccccc
Confidence 4556666544 47788888877654432211 12222322 233444443 4899999998752
Q ss_pred -c--------------------CCCeEEEEEEEECccccCC--------c--------------------HHHHHHHHHH
Q 013702 338 -F--------------------KEKCGEVAAIGVSPECRGQ--------G--------------------QGDKLLDYIE 368 (438)
Q Consensus 338 -~--------------------~~~~~~I~~v~V~p~yRgq--------G--------------------iG~~Ll~~l~ 368 (438)
+ .+..+|+..++|+|+||++ | +...|+..+.
T Consensus 86 ~p~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 165 (241)
T TIGR03694 86 FPFEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLI 165 (241)
T ss_pred ccHHHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHH
Confidence 0 1358899999999999974 1 5677999999
Q ss_pred HHHHHCCCCEEEEEc-HHHHHHHHHCCCeEe
Q 013702 369 KKAASLGLDMLFLLT-TRTADWFKSRGFREC 398 (438)
Q Consensus 369 ~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~ 398 (438)
++|.++|++.++..+ +...+++.++||...
T Consensus 166 ~~a~~~Gi~~~~~v~~~~l~r~l~r~G~~~~ 196 (241)
T TIGR03694 166 ALSSANGITHWYAIMEPRLARLLSRFGIQFR 196 (241)
T ss_pred HHHHHCCCcEEEEEeCHHHHHHHHHhCCceE
Confidence 999999999998888 567889999998754
|
Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production. |
| >COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00049 Score=54.48 Aligned_cols=44 Identities=32% Similarity=0.524 Sum_probs=40.3
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCC
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGF 395 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF 395 (438)
++|+|+|||+|+|++|++.++++++..|+. ....+..+|.++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~----~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS----LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce----ehHHHHHHHHhcCC
Confidence 999999999999999999999999998877 44578999999999
|
|
| >PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2 | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0013 Score=53.18 Aligned_cols=70 Identities=23% Similarity=0.273 Sum_probs=59.1
Q ss_pred ECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEec
Q 013702 324 REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 399 (438)
Q Consensus 324 ~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g 399 (438)
.+|++|..+... ..+++..-++.|+|||||+.+.++....+++.++|+.. +..+ ..++++..++||....
T Consensus 6 peG~PVSW~lmd-----qtge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P~-Y~hv~~~N~~~~r~~~~lg~~~~p 79 (89)
T PF08444_consen 6 PEGNPVSWSLMD-----QTGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFPF-YGHVDEDNEASQRLSKSLGFIFMP 79 (89)
T ss_pred CCCCEeEEEEec-----ccccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCCe-EeehHhccHHHHHHHHHCCCeecC
Confidence 457777777665 46789999999999999999999999999999999875 4444 5789999999999864
|
3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ]. |
| >TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0019 Score=64.47 Aligned_cols=144 Identities=13% Similarity=0.171 Sum_probs=92.9
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc-----------------CcEEEEEE--CCEEEEEEEEeee---
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------------DSFYVVER--EGQIIACAALFPF--- 337 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~-----------------~~~~V~~~--dg~iVG~~~l~~~--- 337 (438)
|||++..|+++|++|-...-.--...|.+++.+.+.+ .+++|.++ .|+++|++++...
T Consensus 2 iRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 81 (336)
T TIGR03245 2 VRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAGY 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEecccC
Confidence 7999999999999995442211122333433333222 24567775 4899999997520
Q ss_pred --------------------------------cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHH---HCCCCEEEEE
Q 013702 338 --------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA---SLGLDMLFLL 382 (438)
Q Consensus 338 --------------------------------~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~---~~g~~~l~l~ 382 (438)
+-.+..+|+.++++|+||+-|.|+.|-+.-.-++. ++-.++++.+
T Consensus 82 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~RfLFiA~~~erF~~~viAE 161 (336)
T TIGR03245 82 GEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFMAAHRERFQSRIIVE 161 (336)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHHHHHHhhHhhhhhhheee
Confidence 00156689999999999999999988876655553 3444555554
Q ss_pred c------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCC
Q 013702 383 T------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427 (438)
Q Consensus 383 t------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~ 427 (438)
- ...-.||+.+|=+..+.+. .+..|--.-.+|.|+..|+|.
T Consensus 162 mrG~~De~G~SPFWd~lg~hFF~mdF----~eAD~Lsg~~~k~FIaeLMP~ 208 (336)
T TIGR03245 162 IQGVQDDNGDSPFWDAIGRHFFDLDF----ATAEYYSGIKSKTFIAELMPP 208 (336)
T ss_pred ccCccCCCCCCccHHHhhccccCCCH----HHHHHHhcCCCceeHHHHCCC
Confidence 4 2345799988877655441 123333345688899888875
|
In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit. |
| >TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0021 Score=64.11 Aligned_cols=144 Identities=16% Similarity=0.179 Sum_probs=93.0
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----------------CcEEEEEE--CCEEEEEEEEeee----
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFPF---- 337 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----------------~~~~V~~~--dg~iVG~~~l~~~---- 337 (438)
|||++..|+++|++|-...-.--...|.+++.+.+.+ .+.+|.++ .|+|+|++++...
T Consensus 2 vRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~ 81 (335)
T TIGR03243 2 VRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGLD 81 (335)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 7999999999999995443211112333333332221 24567775 4899999997520
Q ss_pred -------------------------------cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHH---HCCCCEEEEEc
Q 013702 338 -------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA---SLGLDMLFLLT 383 (438)
Q Consensus 338 -------------------------------~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~---~~g~~~l~l~t 383 (438)
+-.+..+|+.++++|+||+.|.|+.|-+.-.-++. ++-.++++.+-
T Consensus 82 ~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viAEm 161 (335)
T TIGR03243 82 EPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFIAAFRERFGDKIIAEM 161 (335)
T ss_pred CCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHHHHHHhhHhhhhhhheeec
Confidence 00156689999999999999999998876655553 34445555544
Q ss_pred ------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCC
Q 013702 384 ------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427 (438)
Q Consensus 384 ------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~ 427 (438)
...-.||+.+|-+..+.+. + +..|--.-.+|.|+..|+|.
T Consensus 162 rG~~De~G~SPFWd~lg~hFF~mdF-~---~AD~Lsg~~~k~FIaeLMP~ 207 (335)
T TIGR03243 162 RGVSDEQGRSPFWEALGRHFFSMDF-A---QADYLSGIGSKTFIAELMPK 207 (335)
T ss_pred cCccCCCCCCccHHHhhccccCCCH-H---HHHHHhcCCCceeHHHHCCC
Confidence 2445799998877665441 1 23333345688899888875
|
In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). |
| >TIGR03244 arg_catab_AstA arginine N-succinyltransferase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0017 Score=64.81 Aligned_cols=144 Identities=15% Similarity=0.181 Sum_probs=92.7
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----------------CcEEEEEE--CCEEEEEEEEeee----
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFPF---- 337 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----------------~~~~V~~~--dg~iVG~~~l~~~---- 337 (438)
|||++..|+++|++|-...-.--...|.+++.+.+.+ .+++|.++ .|+++|++++...
T Consensus 2 vRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~ 81 (336)
T TIGR03244 2 VRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGLE 81 (336)
T ss_pred cccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccCC
Confidence 7999999999999995543211122444444443332 24567765 4899999997520
Q ss_pred -------------------------------cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH---CCCCEEEEEc
Q 013702 338 -------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS---LGLDMLFLLT 383 (438)
Q Consensus 338 -------------------------------~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~---~g~~~l~l~t 383 (438)
+-.+..+|+.++++|+||+.|.|+.|-+.-.-++.+ +-.++++.+-
T Consensus 82 ~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~RfLFiA~~~erF~~~viAEm 161 (336)
T TIGR03244 82 EPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRFLFIAQFRERFSKKIIAEM 161 (336)
T ss_pred CCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHHHHHHHhhHhhhhhhhhhhh
Confidence 001566899999999999999999888766555533 3334444433
Q ss_pred ------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCC
Q 013702 384 ------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427 (438)
Q Consensus 384 ------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~ 427 (438)
...-.||+.+|=+..+.+ ++ +..|--.-.+|.|+..|+|.
T Consensus 162 rG~~De~G~SPFWd~lg~hFF~md-F~---eAD~Lsg~~~k~FIaeLMP~ 207 (336)
T TIGR03244 162 RGVSDEQGRSPFWNALGRHFFSMD-FS---QADYLSGIGQKAFIAELMPK 207 (336)
T ss_pred cCccCCCCCCchHHHhhccccCCC-HH---HHHHHhccCcchhHHHHCCC
Confidence 234579988887765544 11 22333334677888888875
|
In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST). |
| >KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.009 Score=52.45 Aligned_cols=124 Identities=18% Similarity=0.116 Sum_probs=81.7
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCc--CCcCC----HHHHHhhcC-----cEEEEEE--C-------CEEEEEEEEeee
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGA--LVRRT----DEELLKALD-----SFYVVER--E-------GQIIACAALFPF 337 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~--~~~~~----~e~l~~~~~-----~~~V~~~--d-------g~iVG~~~l~~~ 337 (438)
..+.|.++..++...+|+..-.-... ..+.+ .+....|-. .|+|... + +..||-+-+...
T Consensus 14 vILVPYe~~HV~kYHeWMknEelr~LT~SE~LtLdeEyeMQ~sW~~DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNlFlt 93 (185)
T KOG4135|consen 14 VILVPYEPCHVPKYHEWMKNEELRRLTASEPLTLDEEYEMQKSWREDEDKLTFIVLDAEMNEAGEDEVDHMVGDVNLFLT 93 (185)
T ss_pred EEEeeccccchhHHHhHhhhHHHHHhhcCCCcchhHHHHhhhhhccCCcceEEEEEechhcccCchhHhhhccceeeEEe
Confidence 45889999999999999865332211 12222 222333331 2444411 1 235675554322
Q ss_pred cC---------CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 338 FK---------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 338 ~~---------~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.+ -..+++.-+.-.|..||+|||+..+..++.|+.. .++....+.. .++.+||+|++|..+...
T Consensus 94 ~~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~n 171 (185)
T KOG4135|consen 94 TSPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFYN 171 (185)
T ss_pred cCCCcCCcccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeeee
Confidence 11 1356776677899999999999999999999965 5776766666 589999999999987643
|
|
| >PRK13834 putative autoinducer synthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.012 Score=55.34 Aligned_cols=114 Identities=13% Similarity=0.152 Sum_probs=77.5
Q ss_pred ccCHHHHHHHHHHHHHcCcC--Cc----CCHHHHHhhcCcEEEEE-ECCEEEEEEEEeeec-------------------
Q 013702 285 VTDLSGIKQIIQPLVESGAL--VR----RTDEELLKALDSFYVVE-REGQIIACAALFPFF------------------- 338 (438)
Q Consensus 285 ~~D~~~I~~L~~~~~~~~~~--~~----~~~e~l~~~~~~~~V~~-~dg~iVG~~~l~~~~------------------- 338 (438)
.+++.++.+|....+.+... .+ ...+++...-.++.+.. .+|+++||+.+.+..
T Consensus 15 ~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~ 94 (207)
T PRK13834 15 ASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLN 94 (207)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCCCC
Confidence 34566677777666554321 11 12222322223344444 467999999986421
Q ss_pred -CCCeEEEEEEEECccccCC---c----HHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEe
Q 013702 339 -KEKCGEVAAIGVSPECRGQ---G----QGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 398 (438)
Q Consensus 339 -~~~~~~I~~v~V~p~yRgq---G----iG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~ 398 (438)
.++.+|+..++|+|+++.. + +...|+..+.+++.+.|++.++..+ +...++|.++||...
T Consensus 95 ~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~~~r~l~r~G~~~~ 163 (207)
T PRK13834 95 AHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATDLRFERILARAGWPMQ 163 (207)
T ss_pred CCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeE
Confidence 2368999999999986422 2 5678999999999999999998877 567799999998764
|
|
| >PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.021 Score=48.91 Aligned_cols=98 Identities=18% Similarity=0.078 Sum_probs=70.4
Q ss_pred CccCHHHHHHHHHHHHHcC---cCCcCCHHHHHh---hc-----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECc
Q 013702 284 KVTDLSGIKQIIQPLVESG---ALVRRTDEELLK---AL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352 (438)
Q Consensus 284 t~~D~~~I~~L~~~~~~~~---~~~~~~~e~l~~---~~-----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p 352 (438)
+++|++.+.+++....... +..+.+.+-+.. .. -.++++..+|++||+..... ..+..+.....++|
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~~--~~~~~~~~~~g~~~ 104 (142)
T PF13480_consen 27 DPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGFR--HGGTLYYWYGGYDP 104 (142)
T ss_pred CHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEEE--ECCEEEEEEEEECH
Confidence 4567777777776544332 222333332222 22 24677788999999987663 44678888899999
Q ss_pred cccCCcHHHHHHHHHHHHHHHCCCCEEEEEc
Q 013702 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 383 (438)
Q Consensus 353 ~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t 383 (438)
+|+..+.|..|+..++++|.+.|++.+-+..
T Consensus 105 ~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 105 EYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred hhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 9999999999999999999999998876654
|
|
| >PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.019 Score=52.73 Aligned_cols=81 Identities=16% Similarity=0.206 Sum_probs=55.1
Q ss_pred EEEEEC-CEEEEEEEEeeec------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHH
Q 013702 320 YVVERE-GQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 392 (438)
Q Consensus 320 ~V~~~d-g~iVG~~~l~~~~------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k 392 (438)
+++..+ .++|+.+.+..+. +.....++.++++|+|||+|+++.+-+.+.+..+..+-..+...+..+.+||.+
T Consensus 49 ~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~N~~~~~~~~~~~~w~k 128 (181)
T PF06852_consen 49 LTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDDNSVAQGNVKMSNFWHK 128 (181)
T ss_pred EEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCCceeeecCHHHHHHHHH
Confidence 344444 5688888775433 346889999999999999999975545444544443334444444677888877
Q ss_pred -CCCeEece
Q 013702 393 -RGFRECSI 400 (438)
Q Consensus 393 -~GF~~~g~ 400 (438)
+||...+.
T Consensus 129 ~~G~~~~~h 137 (181)
T PF06852_consen 129 MFGFDDYGH 137 (181)
T ss_pred HhCCCCCcc
Confidence 79888765
|
Note that some proteins in the entry contain more than one copy of this region. |
| >COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.064 Score=49.97 Aligned_cols=117 Identities=13% Similarity=0.148 Sum_probs=80.4
Q ss_pred CCccCHHHHHHHHHHHHHcCcC------CcCCHHHHHhhcCcEEEE-EECCEEEEEEEEeeec-----------------
Q 013702 283 AKVTDLSGIKQIIQPLVESGAL------VRRTDEELLKALDSFYVV-EREGQIIACAALFPFF----------------- 338 (438)
Q Consensus 283 at~~D~~~I~~L~~~~~~~~~~------~~~~~e~l~~~~~~~~V~-~~dg~iVG~~~l~~~~----------------- 338 (438)
..++-++++.++....+.+... .....+++.+.--.+.++ ..+++|+||+.+.|.-
T Consensus 12 ~~~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~ 91 (209)
T COG3916 12 LFPKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGP 91 (209)
T ss_pred hcHHHHHHHHHHHHHHHHHhcCCceeccCCccccccCCCCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCCC
Confidence 3344556677776666554321 112233333322234455 6789999999987521
Q ss_pred ---CCCeEEEEEEEECc--cccCC---c-HHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 339 ---KEKCGEVAAIGVSP--ECRGQ---G-QGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 339 ---~~~~~~I~~v~V~p--~yRgq---G-iG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
+++.+|...|+|++ .-+.. . ++..|+.-+++++.+.|++.|...| ....+.+++.||....
T Consensus 92 ~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~~IvtVt~~~meril~r~Gw~~~r 162 (209)
T COG3916 92 PPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGITGIVTVTDTGMERILRRAGWPLTR 162 (209)
T ss_pred CCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCceEEEEEchHHHHHHHHcCCCeEE
Confidence 13788999999987 22222 2 4889999999999999999999888 5789999999998764
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.011 Score=61.23 Aligned_cols=124 Identities=16% Similarity=0.197 Sum_probs=93.6
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhc--CcEEEE---E----ECCEEEEEEEEeeecCCCeEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL--DSFYVV---E----REGQIIACAALFPFFKEKCGEV 345 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~--~~~~V~---~----~dg~iVG~~~l~~~~~~~~~~I 345 (438)
+.+++++....+++.|.+|.+..-+-... ...+.++..+.. ..+.+. . -|.-+||++.+.. .+..+.|
T Consensus 412 m~l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~k--k~~~w~I 489 (574)
T COG3882 412 MRLTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEK--KESEWFI 489 (574)
T ss_pred EEEEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEe--cCCeEEh
Confidence 45778999999999999998765544443 334677777633 233222 1 2456899998874 4478888
Q ss_pred EEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHHCCCeEecee
Q 013702 346 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 346 ~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t------~~a~~fY~k~GF~~~g~~ 401 (438)
..+..+=+.=|+++-.+||..+++.|...|...+.... .+..+||+++||+..+..
T Consensus 490 Dt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~~en 551 (574)
T COG3882 490 DTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERMGFKLKGEN 551 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHHHHHHhcccccccc
Confidence 88887777779999999999999999999999888766 256899999999966544
|
|
| >COG5628 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.04 Score=46.73 Aligned_cols=78 Identities=15% Similarity=0.110 Sum_probs=57.7
Q ss_pred CcEEEEEECCEEEEEEEEeee---cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHH
Q 013702 317 DSFYVVEREGQIIACAALFPF---FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFK 391 (438)
Q Consensus 317 ~~~~V~~~dg~iVG~~~l~~~---~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~ 391 (438)
...|....++.+|||+.+... ..+-..-+..+++-..|||+|+|++..+.+...+ +|...+.... ++|..||+
T Consensus 37 ~~~~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~--~g~w~Va~i~EN~PA~~fwK 114 (143)
T COG5628 37 REAWLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSA--WGVWQVATVRENTPARAFWK 114 (143)
T ss_pred cceeEEEECCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHh--hceEEEEEeccCChhHHHHH
Confidence 345667779999999987532 2234456888999999999999999999887655 4545544333 68999999
Q ss_pred HCCCe
Q 013702 392 SRGFR 396 (438)
Q Consensus 392 k~GF~ 396 (438)
+.=+.
T Consensus 115 ~~~~t 119 (143)
T COG5628 115 RVAET 119 (143)
T ss_pred hhhcc
Confidence 96554
|
|
| >COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.025 Score=58.38 Aligned_cols=51 Identities=18% Similarity=0.352 Sum_probs=45.3
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
...||.+|+|++||+.+++.|++.+..++.+.+ -.+...|.|+||...|+.
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG~ReYy~k~GY~~~gpY 510 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIGVREYYRKLGYELDGPY 510 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEecccHHHHHHHhCccccCCc
Confidence 478999999999999999999998888887766 588999999999987753
|
|
| >PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.53 Score=43.59 Aligned_cols=115 Identities=16% Similarity=0.176 Sum_probs=79.6
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhcC------cEEEEEECC-EEEEEEEEeeecC-----C-----C
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD------SFYVVEREG-QIIACAALFPFFK-----E-----K 341 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~~------~~~V~~~dg-~iVG~~~l~~~~~-----~-----~ 341 (438)
+|+++++|++++.+|+......-.. ...+.+++.+|+- ..||+++++ +|-.+++++..+. + .
T Consensus 31 lR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~~l~ 110 (190)
T PF02799_consen 31 LRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHKTLK 110 (190)
T ss_dssp EEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSSEEE
T ss_pred cccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCCcccee
Confidence 8999999999999999987765333 4568899999872 367777765 8889888875432 1 3
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
.+++. .++... =--.+|+..++-.|++.|+.-..+.. -....|.+.+.|.+-.
T Consensus 111 aAY~f-Y~~~~~----~~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~~fL~~lKFg~Gd 164 (190)
T PF02799_consen 111 AAYSF-YYVATS----TRLKELMNDALILAKNEGFDVFNALDLMDNSSFLEDLKFGPGD 164 (190)
T ss_dssp EEEEE-EEEESS----SHHHHHHHHHHHHHHHTTESEEEEESTTTGGGTTTTTT-EEEE
T ss_pred eeeee-eeeecC----CCHHHHHHHHHHHHHHcCCCEEehhhhccchhhHhhCCccCCC
Confidence 44542 233222 23578999999999999998877766 3445889999999754
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A .... |
| >COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.098 Score=50.82 Aligned_cols=89 Identities=17% Similarity=0.277 Sum_probs=56.9
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----------------CcEEEEEE--CCEEEEEEEEee--
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----------------DSFYVVER--EGQIIACAALFP-- 336 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----------------~~~~V~~~--dg~iVG~~~l~~-- 336 (438)
++.+||++..|++++.+|-...-.--...|...+.+...+ .+++|.++ .|+++|++++.-
T Consensus 1 mlvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~v 80 (336)
T COG3138 1 MLVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAV 80 (336)
T ss_pred CcccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEee
Confidence 3568999999999999995432111111333333332222 24667776 589999988741
Q ss_pred -----ec----------------------------CCCeEEEEEEEECccccCCcHHHHHHH
Q 013702 337 -----FF----------------------------KEKCGEVAAIGVSPECRGQGQGDKLLD 365 (438)
Q Consensus 337 -----~~----------------------------~~~~~~I~~v~V~p~yRgqGiG~~Ll~ 365 (438)
+. -.+..+++.++++|+||.-+.|+.|-+
T Consensus 81 Gl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr 142 (336)
T COG3138 81 GLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLSK 142 (336)
T ss_pred ccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhhh
Confidence 10 014568889999999997777776654
|
|
| >PRK01305 arginyl-tRNA-protein transferase; Provisional | Back alignment and domain information |
|---|
Probab=93.79 E-value=1.5 Score=42.31 Aligned_cols=92 Identities=15% Similarity=0.176 Sum_probs=64.1
Q ss_pred HHHHHHHHH----HHcCcCCcCCHHHHHhhcC------cEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcH
Q 013702 290 GIKQIIQPL----VESGALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 359 (438)
Q Consensus 290 ~I~~L~~~~----~~~~~~~~~~~e~l~~~~~------~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGi 359 (438)
+-.+|+..+ +.++-+.+.+.+++...+. .++-...+|++||++.+.... +...-+ -.+-||+|-.+++
T Consensus 107 E~~~Ly~rY~~~rH~dg~m~~~~~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~-d~lSAV-Y~FyDPd~~~~SL 184 (240)
T PRK01305 107 EHYALYRRYLRARHADGGMDPPSRDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLD-DGLSAV-YTFYDPDEEHRSL 184 (240)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccC-CceeeE-EEeeCCCccccCC
Confidence 344454443 3344444556676665542 233445689999999887433 333344 4556999999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEc
Q 013702 360 GDKLLDYIEKKAASLGLDMLFLLT 383 (438)
Q Consensus 360 G~~Ll~~l~~~a~~~g~~~l~l~t 383 (438)
|+-.+-.-+++|++.|.+.+++.-
T Consensus 185 G~~~iL~qI~~ak~~gl~y~YLGY 208 (240)
T PRK01305 185 GTFAILWQIELAKRLGLPYVYLGY 208 (240)
T ss_pred HHHHHHHHHHHHHHcCCCeEeeeE
Confidence 999999999999999999999865
|
|
| >PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.61 Score=43.04 Aligned_cols=104 Identities=17% Similarity=0.126 Sum_probs=58.7
Q ss_pred CCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC--cEEEEE-EC---CEEEEEEEEeeecCC
Q 013702 267 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVVE-RE---GQIIACAALFPFFKE 340 (438)
Q Consensus 267 g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~--~~~V~~-~d---g~iVG~~~l~~~~~~ 340 (438)
..|..|.++..+.+..++=..-....+-+- +...-|+... .+..++. .|||+. .| -.++||-+-... ..
T Consensus 4 PPG~eiYr~~~~sifEVdG~~~~~yCqnLc-LlaKLFLd~K---tlyydv~~F~FYVl~e~d~~g~h~vGyFSKEk~-s~ 78 (188)
T PF01853_consen 4 PPGNEIYRDDNISIFEVDGAKHKLYCQNLC-LLAKLFLDHK---TLYYDVDPFLFYVLTEKDDDGFHIVGYFSKEKE-SW 78 (188)
T ss_dssp -SSEEEEEETTEEEEEEETTTSHHHHHHHH-HHHHTT-SSG---CCTT-STTEEEEEEEEEETTEEEEEEEEEEESS--T
T ss_pred CCcCEEEECCCeEEEEEECCcCchHHHHHH-HHHHHHhhCe---EEEeecCceEEEEEEEecCccceeEEEEEEEec-cc
Confidence 457777777666776665433332222111 1111121110 0111122 244443 33 258888876533 33
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 375 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g 375 (438)
...-+.|+.|.|.||++|+|+.|++..-..++..+
T Consensus 79 ~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 79 DNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp T-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred CCeeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 56789999999999999999999999999887765
|
These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A .... |
| >COG3375 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.71 Score=43.57 Aligned_cols=106 Identities=13% Similarity=0.077 Sum_probs=74.0
Q ss_pred EEEECC-ccCHHHHHHHHHHHHHcCcCCcCCHHHHHhh---cCcEEEEEECC-EEEEEEEEee-ecCCC-eEEEEEEEEC
Q 013702 279 GTRTAK-VTDLSGIKQIIQPLVESGALVRRTDEELLKA---LDSFYVVEREG-QIIACAALFP-FFKEK-CGEVAAIGVS 351 (438)
Q Consensus 279 ~IR~at-~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~---~~~~~V~~~dg-~iVG~~~l~~-~~~~~-~~~I~~v~V~ 351 (438)
.+|.++ +.++++..++....+..........+.+... -.....++.++ ++||..--+| ..... ..+-+..+|.
T Consensus 4 vvrrl~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~al~~~GGlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV~ 83 (266)
T COG3375 4 VVRRLTDPAELDEAEDVQASAWGSEDRDGAPADTIRALRYHGGLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGVR 83 (266)
T ss_pred eEEecCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHhcCCeEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhcc
Confidence 355554 5677888888777765544433344444332 24466677655 9999987776 22222 3456678999
Q ss_pred ccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcH
Q 013702 352 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT 384 (438)
Q Consensus 352 p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~ 384 (438)
|++++.|+|-+|=..--+++...|+..+...-.
T Consensus 84 e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfD 116 (266)
T COG3375 84 EEVKGSGLGVALKMKQRERALSMGYTLIAWTFD 116 (266)
T ss_pred ccccccchhhhhHHHHHHHHHhcCeeeEEEecc
Confidence 999999999999998889999999998877663
|
|
| >KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.084 Score=53.43 Aligned_cols=71 Identities=20% Similarity=0.235 Sum_probs=58.3
Q ss_pred CCceEEEcCc-c-cCCCCCeeec---ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHH
Q 013702 79 GGCLVILSNL-G-YSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIR 146 (438)
Q Consensus 79 ~g~IPVi~~i-~-~~~~g~~~ni---naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~ 146 (438)
.+.+||++++ | ..+.|-+..+ ..|..|+.||++|++|.+-.--||+|+ | |.+++++.+|++|+.+|.-
T Consensus 258 en~VPVvTGf~Gk~~~tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaELaY 337 (559)
T KOG0456|consen 258 ENAVPVVTGFLGKGWPTGALTTLGRGGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAELAY 337 (559)
T ss_pred CCccceEeeccccCccccceecccCCchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHHHHh
Confidence 4789999985 6 4566655544 579999999999999999999999987 4 4589999999999999865
Q ss_pred hhh
Q 013702 147 QRV 149 (438)
Q Consensus 147 ~g~ 149 (438)
-|.
T Consensus 338 fGa 340 (559)
T KOG0456|consen 338 FGA 340 (559)
T ss_pred hhh
Confidence 543
|
|
| >PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.11 Score=40.22 Aligned_cols=30 Identities=30% Similarity=0.399 Sum_probs=26.1
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHH
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKA 371 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a 371 (438)
.+-|..+.|+|.+|++||+++||+.+....
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 456889999999999999999999887654
|
|
| >cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.3 Score=40.48 Aligned_cols=67 Identities=16% Similarity=0.209 Sum_probs=48.9
Q ss_pred EEEEEECCEEEEEEEEeeec-CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHH
Q 013702 319 FYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWF 390 (438)
Q Consensus 319 ~~V~~~dg~iVG~~~l~~~~-~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY 390 (438)
.+-++.++...||+.+.+.. .....+|..++|.|..|++|+++.|+..+.+.. +.++..+ ++..+||
T Consensus 10 ~~~~y~~e~y~~~aIvt~~~~~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~-----~~L~Wrsr~~n~~n~Wy 80 (99)
T cd04264 10 LHAIYLSEGYNAAAIVTYEGVNNGVPYLDKFAVSSSAQGEGTSDALWRRLRRDF-----PKLFWRSRKTNPINPWY 80 (99)
T ss_pred ceEEEEeCCceEEEEEeccCCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCcccceE
Confidence 44456667788888886422 247899999999999999999999999887553 4555544 3445555
|
DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2 | Back alignment and domain information |
|---|
Probab=93.21 E-value=2.4 Score=38.07 Aligned_cols=54 Identities=15% Similarity=0.166 Sum_probs=44.0
Q ss_pred CCEEEEEEEEeeec------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 325 EGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 325 dg~iVG~~~l~~~~------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
.+++|||++..|.. .-...+|..++||+.+|.++++--|++++-+.+...|+-.
T Consensus 87 ~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~q 146 (162)
T PF01233_consen 87 SKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQ 146 (162)
T ss_dssp TTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--E
T ss_pred CCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCcee
Confidence 68999999876531 1267899999999999999999999999999999888754
|
3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A .... |
| >PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein | Back alignment and domain information |
|---|
Probab=92.99 E-value=1.5 Score=38.00 Aligned_cols=77 Identities=18% Similarity=0.116 Sum_probs=55.5
Q ss_pred CcCCHHHHHhhcC------cEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 305 VRRTDEELLKALD------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 305 ~~~~~e~l~~~~~------~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
.+.+.+++...+. ...-...+|++||++.+...+ +...-+ -.+-+|++....+|+-.+-.-+++|++.|.+.
T Consensus 21 ~~~~~~~y~~fl~~~~~~t~~~~~~~~~kLiav~v~D~l~-~glSaV-Y~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y 98 (128)
T PF04377_consen 21 DPPSQEQYRRFLCSSPLGTYHLEYRLDGKLIAVAVVDILP-DGLSAV-YTFYDPDYSKRSLGTYSILREIELARELGLPY 98 (128)
T ss_pred CCcCHHHHHHHHhCCCCCCEEEEEEeCCeEEEEEEeeccc-chhhhe-eeeeCCCccccCcHHHHHHHHHHHHHHcCCCE
Confidence 3334666665542 233445789999998876433 333334 23459999999999999999999999999999
Q ss_pred EEEEc
Q 013702 379 LFLLT 383 (438)
Q Consensus 379 l~l~t 383 (438)
+++--
T Consensus 99 ~YLGY 103 (128)
T PF04377_consen 99 YYLGY 103 (128)
T ss_pred EeeCe
Confidence 98843
|
In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation |
| >KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
Probab=92.66 E-value=0.15 Score=50.84 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=42.4
Q ss_pred ccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 352 PECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 352 p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
..||.||+|..||+.+++.|++ +|-..+.+.. ..+..+|.|+||+..++.
T Consensus 497 ~KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVGtR~YY~klGY~LdGPY 548 (554)
T KOG2535|consen 497 TKFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVGTRNYYRKLGYELDGPY 548 (554)
T ss_pred hhhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccchHHHHHhhCeeecChh
Confidence 3699999999999999999975 7777877666 578999999999987653
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.48 E-value=0.83 Score=52.14 Aligned_cols=123 Identities=11% Similarity=0.122 Sum_probs=86.5
Q ss_pred EEEECC-ccCHHHHHHHHHH-HHHcCcCCcCCHHHHHh---hc--CcEEEEEECCEEEEEEEEeeecC------------
Q 013702 279 GTRTAK-VTDLSGIKQIIQP-LVESGALVRRTDEELLK---AL--DSFYVVEREGQIIACAALFPFFK------------ 339 (438)
Q Consensus 279 ~IR~at-~~D~~~I~~L~~~-~~~~~~~~~~~~e~l~~---~~--~~~~V~~~dg~iVG~~~l~~~~~------------ 339 (438)
.||.++ .+|+..+..|... +..+++..+-+...+.. .+ ...|++...+++++...+.+...
T Consensus 30 ~~r~Aet~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~~~~~l~T~t~~~ds~~~Gl~~D~lf~~ 109 (989)
T PRK14852 30 AIKIAETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKSYHDVLCTLTHIPDSGLFGLPMDTLYKP 109 (989)
T ss_pred ceeecCCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEeccCCcEEEEEEEecCCcccCcCHHHHHHH
Confidence 467765 5778899999877 45667764433222211 12 23466655566666666543211
Q ss_pred ---------CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHH-CCCeEecee
Q 013702 340 ---------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKS-RGFRECSIE 401 (438)
Q Consensus 340 ---------~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k-~GF~~~g~~ 401 (438)
...++++.++++|+.|.+-+=-.|++.+.+++...++..++..+ +.-..||++ +||+..+..
T Consensus 110 eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~FY~r~l~f~~ig~~ 182 (989)
T PRK14852 110 EVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVKFYTDIFLFKPFGEV 182 (989)
T ss_pred HHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHHHHHHHhCCcccccc
Confidence 26889999999999998877778888898888888999988888 466899997 799998753
|
|
| >TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated | Back alignment and domain information |
|---|
Probab=92.46 E-value=1.6 Score=43.73 Aligned_cols=81 Identities=19% Similarity=0.184 Sum_probs=60.0
Q ss_pred EEEEE-ECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHC
Q 013702 319 FYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSR 393 (438)
Q Consensus 319 ~~V~~-~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~ 393 (438)
++++. .++++||.+.+... .+..+....+.+++++..+-...|+-.++++|.+.|++..-+.. ....+|-++.
T Consensus 197 l~~a~~~~g~~va~~l~~~~--~~~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~ 274 (330)
T TIGR03019 197 VLTVRLGDGVVASAVLSFYF--RDEVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNW 274 (330)
T ss_pred EEEEEeCCCCEEEEEEEEEe--CCEEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcC
Confidence 45566 68888887665533 23343334567899999999999999999999999999887654 1455666778
Q ss_pred CCeEecee
Q 013702 394 GFRECSIE 401 (438)
Q Consensus 394 GF~~~g~~ 401 (438)
||+.+...
T Consensus 275 G~~~~~l~ 282 (330)
T TIGR03019 275 GFEPQPLH 282 (330)
T ss_pred CCeeccce
Confidence 99987644
|
Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members |
| >KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.80 E-value=1.7 Score=43.72 Aligned_cols=116 Identities=16% Similarity=0.211 Sum_probs=82.8
Q ss_pred EEEECCccCHHHHHHHHHHHHHc-CcCCcCCHHHHHhhcC------cEEEEEE-CCEEEEEEEEeeecCC----------
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKALD------SFYVVER-EGQIIACAALFPFFKE---------- 340 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~-~~~~~~~~e~l~~~~~------~~~V~~~-dg~iVG~~~l~~~~~~---------- 340 (438)
-+|+++..|++++.+|+..+... .+....+.+++++|+- ..||++. +|+|-+|++++-.+..
T Consensus 262 G~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~SFy~lpsTv~~~~~~ktl 341 (421)
T KOG2779|consen 262 GLREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRENVVYSYVVESPNGKITDFCSFYSLPSTVMGNPKYKTL 341 (421)
T ss_pred CcccccccchHHHHHHHHHHHHheecccccCHHHhHhhcccccceEEEEEEECCCCcccceeeEEeccccccCCCCccee
Confidence 48999999999999999886544 4445567899988872 3566665 7999999998854321
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
..+++ ...|+.+ ---.+|+.-++-.+++.|+.-..+.. -....|+++++|-.-.
T Consensus 342 ~aaYl-yY~v~~~----t~~~~lvnDalilak~~gfDVFNAld~meN~~fl~~LkFg~Gd 396 (421)
T KOG2779|consen 342 QAAYL-YYNVATS----TPLLQLVNDALILAKQKGFDVFNALDLMENESFLKDLKFGPGD 396 (421)
T ss_pred eeeeE-EEeccCC----ccHHHHHHHHHHHHHhcCCceeehhhhhhhhhHHHhcCcCcCC
Confidence 33444 3334333 12467888888888999988765554 3567899999998743
|
|
| >cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.51 Score=39.11 Aligned_cols=67 Identities=16% Similarity=0.243 Sum_probs=47.4
Q ss_pred EEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHH
Q 013702 319 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWF 390 (438)
Q Consensus 319 ~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY 390 (438)
.+-++.++..=||+.+.+.......+|..++|.|..||+|+++.|++.+.+.. +.++..+ ++..+||
T Consensus 11 ~~~~y~~e~y~~~aivt~~~~~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~-----~~L~Wrsr~~n~~n~Wy 80 (99)
T cd04265 11 LHTIYLSEGYNAAAIVTNEEVDGVPYLDKFAVSSSAQGEGTGEALWRRLRRDF-----PKLFWRSRSTNPINPWY 80 (99)
T ss_pred ceEEEEeCCCcEEEEEeccCCCCceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCcccceE
Confidence 44455566666777776432247899999999999999999999999888554 3455544 3445555
|
This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized. |
| >PTZ00064 histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.66 Score=48.64 Aligned_cols=102 Identities=18% Similarity=0.123 Sum_probs=61.1
Q ss_pred CCCcccccCCceeEEEECCccCHHHHHH---HHHHHHHcCcCCcCCHHHHHhhcC--cEEEE-EEC---CEEEEEEEEee
Q 013702 266 DGMGTMVASDLYEGTRTAKVTDLSGIKQ---IIQPLVESGALVRRTDEELLKALD--SFYVV-ERE---GQIIACAALFP 336 (438)
Q Consensus 266 ~g~GT~i~~d~~~~IR~at~~D~~~I~~---L~~~~~~~~~~~~~~~e~l~~~~~--~~~V~-~~d---g~iVG~~~l~~ 336 (438)
...|..|+++..+.|..+.=.......+ |+..++-++-. +.-++. .|||+ +.| -.+|||..=..
T Consensus 307 hPPG~EIYR~~~iSifEVDG~~~klYCQNLCLLAKLFLDhKT-------LYyDVdpFlFYVLtE~D~~G~HiVGYFSKEK 379 (552)
T PTZ00064 307 HPPGNEIYRKDNISVFEIDGALTRGYAENLCYLAKLFLDHKT-------LQYDVEPFLFYIVTEVDEEGCHIVGYFSKEK 379 (552)
T ss_pred CCCCCeEEEeCCEEEEEEeCccchhHHHHHHHHHHHhccCcc-------ccccccceEEEEEEEecCCCcEEEEEecccc
Confidence 3457778776666666655433332222 22222222211 111222 24444 333 36888877553
Q ss_pred ecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC
Q 013702 337 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 375 (438)
Q Consensus 337 ~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g 375 (438)
. .....-+.||.|.|.||++|||+.|++..-.+.+..|
T Consensus 380 ~-S~~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 380 V-SLLHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred c-CcccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 2 2234579999999999999999999999988887665
|
|
| >KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.54 Score=51.10 Aligned_cols=84 Identities=20% Similarity=0.301 Sum_probs=56.4
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC-------------CCEEE----------------------------
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-------------LDMLF---------------------------- 380 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g-------------~~~l~---------------------------- 380 (438)
-+.|-.++|||+|++.|||++-++.+.++...+. .+++.
T Consensus 614 GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~~~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L~er 693 (1011)
T KOG2036|consen 614 GARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGKFTSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKLSER 693 (1011)
T ss_pred CceEEEEEeccchhccCccHHHHHHHHHHHhccCCCccccccccCccccccchhhhhhhhhhhcccccCCCceeeEcccC
Confidence 3467799999999999999999999998874321 11110
Q ss_pred -------E-----EcHHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCCCCC
Q 013702 381 -------L-----LTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSG 430 (438)
Q Consensus 381 -------l-----~t~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~~~g 430 (438)
+ .|....+||+++||.++...+-+.. -....+.++++.+-++.++
T Consensus 694 ~perldylGvSfGLT~~L~kFWk~~gF~PvylrQt~n~-----lTGEHtcimLk~L~~~e~~ 750 (1011)
T KOG2036|consen 694 PPERLDYLGVSFGLTPSLLKFWKKNGFVPVYLRQTSND-----LTGEHTCIMLKTLEGDESG 750 (1011)
T ss_pred CCcccceeeecccCCHHHHHHHHhcCceeEEeeccccc-----cccceeEEEEecCCCcccc
Confidence 0 0135689999999999875543321 1123567777777655544
|
|
| >PLN03238 probable histone acetyltransferase MYST; Provisional | Back alignment and domain information |
|---|
Probab=91.21 E-value=0.46 Score=46.52 Aligned_cols=49 Identities=16% Similarity=0.171 Sum_probs=38.9
Q ss_pred CEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC
Q 013702 326 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 375 (438)
Q Consensus 326 g~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g 375 (438)
..+|||-+-.... ....-+.|+.|.|.||++|+|+.|++..-...+..|
T Consensus 140 ~h~vGYFSKEK~s-~~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 140 SHIVGYFSKEKVS-AEDYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred cEEEEEeceeccc-cCCCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 3588888765322 233569999999999999999999999988887665
|
|
| >PLN03239 histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.76 E-value=0.9 Score=45.77 Aligned_cols=102 Identities=14% Similarity=0.026 Sum_probs=61.3
Q ss_pred CCCcccccCCceeEEEECCccCHHHHH---HHHHHHHHcCcCCcCCHHHHHhhcC--cEEEEEE-C---CEEEEEEEEee
Q 013702 266 DGMGTMVASDLYEGTRTAKVTDLSGIK---QIIQPLVESGALVRRTDEELLKALD--SFYVVER-E---GQIIACAALFP 336 (438)
Q Consensus 266 ~g~GT~i~~d~~~~IR~at~~D~~~I~---~L~~~~~~~~~~~~~~~e~l~~~~~--~~~V~~~-d---g~iVG~~~l~~ 336 (438)
...|..|.++..+.|..+.=....... -|+..++-++-. +.-.+. .|||+.+ | -.+|||-+=..
T Consensus 136 ~PPG~eIYR~~~~sifEVDG~~~~~yCQnLCLlaKLFLdhKt-------lyyDV~~FlFYVl~e~D~~g~h~vGYFSKEK 208 (351)
T PLN03239 136 HPPGNEIYRCGDLAMFEVDGFEERIYCQNLCYIAKLFLDHKT-------LYFDVDPFLFYVLCEVDERGFHPVGYYSKEK 208 (351)
T ss_pred CCCCCeEEEeCCEEEEEEeCccchHHHHHHHHHHHHhhcCcc-------eeccccceEEEEEEEecCCceEEEEEeeecc
Confidence 356888887766666666543333222 222222322211 111222 2455433 2 35888876553
Q ss_pred ecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC
Q 013702 337 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 375 (438)
Q Consensus 337 ~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g 375 (438)
. .....-+.|+.|.|.||++|+|+.|++..-...+..|
T Consensus 209 ~-s~~~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 209 Y-SDVGYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred c-CCCCCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 2 2233469999999999999999999999988887655
|
|
| >PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch | Back alignment and domain information |
|---|
Probab=88.29 E-value=1.9 Score=36.75 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=33.4
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHH
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKS 392 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k 392 (438)
.|-.++|++..|++|+|++|++++++. .++..-.+.. .....|.+|
T Consensus 48 cvLDFyVhes~QR~G~Gk~LF~~ML~~---e~~~p~~~a~DrPS~Kll~Fl~K 97 (120)
T PF05301_consen 48 CVLDFYVHESRQRRGYGKRLFDHMLQE---ENVSPHQLAIDRPSPKLLSFLKK 97 (120)
T ss_pred eeeeEEEEeceeccCchHHHHHHHHHH---cCCCcccceecCCcHHHHHHHHH
Confidence 456899999999999999999999854 3444333333 355677766
|
Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity |
| >PLN00104 MYST -like histone acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=87.54 E-value=0.64 Score=48.45 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=38.6
Q ss_pred CEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC
Q 013702 326 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 375 (438)
Q Consensus 326 g~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g 375 (438)
-.+|||.+-... .....-+.||.|.|.||++|||+.|++..-.+.+..|
T Consensus 291 ~h~vGyFSKEk~-s~~~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 291 CHMVGYFSKEKH-SEEDYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred cEEEEEeccccc-CcCCCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 379998876532 2233569999999999999999999998888886654
|
|
| >COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.02 E-value=0.61 Score=48.16 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=47.2
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEE-----c-HH---HHHHHHHCCCeEe
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL-----T-TR---TADWFKSRGFREC 398 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~-----t-~~---a~~fY~k~GF~~~ 398 (438)
..+.|..+.|||+||+-|+|..-+..+.+|..++-+...+-. + .+ =..||++.||+..
T Consensus 240 aaariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkyl 306 (593)
T COG2401 240 AAARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYL 306 (593)
T ss_pred hhhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeee
Confidence 456799999999999999999999999999988777655433 1 12 2579999999976
|
|
| >PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria | Back alignment and domain information |
|---|
Probab=83.02 E-value=6.7 Score=36.09 Aligned_cols=107 Identities=13% Similarity=0.208 Sum_probs=72.8
Q ss_pred CccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEE-EECCEEEEEEEEeeecC-----------------------
Q 013702 284 KVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVV-EREGQIIACAALFPFFK----------------------- 339 (438)
Q Consensus 284 t~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~-~~dg~iVG~~~l~~~~~----------------------- 339 (438)
.......+.+++...+...+.-. +......++.. ..+|++++++++..-.+
T Consensus 6 ~~~~r~~~e~fI~~~y~~~~~A~-----i~~f~P~ll~l~~~~g~l~aa~G~r~A~~~~LFlEqYLd~piE~~l~~~~g~ 80 (179)
T PF12261_consen 6 GDPERAEVEQFIRQRYAQAYGAT-----IRHFMPQLLALRDSDGELVAAAGLRFASQEPLFLEQYLDQPIEQLLSRRFGR 80 (179)
T ss_pred CchhHHHHHHHHHHHHHHHhCCc-----CCccchHHhhhccCCCCEEEEEeecccCCCCcchhhhcCCcHHHHHHhhcCC
Confidence 34456677777766555543311 11111122233 56789999998863211
Q ss_pred ----CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 340 ----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 340 ----~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
....||+.++-. +.|.+..|+..+..+....|++++.... .+..+++.|+|.....
T Consensus 81 ~v~R~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w~vfTaT~~lr~~~~rlgl~~~~ 141 (179)
T PF12261_consen 81 PVSRSQIVEVGNLASF----SPGAARLLFAALAQLLAQQGFEWVVFTATRQLRNLFRRLGLPPTV 141 (179)
T ss_pred CcchhheeEeechhhc----CcccHHHHHHHHHHHHHHCCCCEEEEeCCHHHHHHHHHcCCCcee
Confidence 156788888755 5889999999999999999999976655 5789999999999775
|
Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species. |
| >PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold | Back alignment and domain information |
|---|
Probab=82.80 E-value=33 Score=30.30 Aligned_cols=121 Identities=14% Similarity=0.117 Sum_probs=66.7
Q ss_pred eEEEECCccCHHHHHHHHHHHHHc-------------CcCCcCCHHH--HHhhcCcEEEEE-ECCEEEEEEEEeeec--C
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVES-------------GALVRRTDEE--LLKALDSFYVVE-REGQIIACAALFPFF--K 339 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~-------------~~~~~~~~e~--l~~~~~~~~V~~-~dg~iVG~~~l~~~~--~ 339 (438)
|.+|++++.|++.+.++-...... ....+-+... +...-.+.|++. +++++.||+.....+ +
T Consensus 1 M~yR~f~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~RsgHSFvA~~e~~~~~GfvLAQaVWQGd 80 (161)
T PF09390_consen 1 MRYRPFTEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYERSGHSFVAEDEGGELQGFVLAQAVWQGD 80 (161)
T ss_dssp -EEE---GGGHHHHHHC--------------------STTS---HHHHHHHHCCS--EEEE-ETTEEEEEEEEEEEE-SS
T ss_pred CcccccCcccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhhccCCcEEEEccCCceeeeeehhHHhcCC
Confidence 478999999999999883221111 0011122222 233347889998 889999999765533 3
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcH-HHHHHHHHCCCeEec
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECS 399 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~-~a~~fY~k~GF~~~g 399 (438)
..+..+..+.++|.- ......-||+.+.+-|=+.++..+.+..+ ....--+..||...+
T Consensus 81 rptVlV~ri~~~~~~-~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p~l~~A~~a~~~~~~~ 140 (161)
T PF09390_consen 81 RPTVLVRRILLAPGE-PEEVYEGLLRAVVKSAYDAGVYEVHLHLDPELEAAARAEGFRLGG 140 (161)
T ss_dssp SEEEEEEEE---EES-SHHHHHHHHHHHHHHHHHTT-SEEEE---THHHHHHHHTT----S
T ss_pred CceEEEEEeecCCCC-cHHHHHHHHHHHHHhhhccceEEEEeeCCHHHHHHHhhcccccCC
Confidence 456777777776653 45778889999999998999998888764 334445566777544
|
; PDB: 2D4O_A 2D4P_A. |
| >PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [] | Back alignment and domain information |
|---|
Probab=82.10 E-value=14 Score=36.40 Aligned_cols=65 Identities=18% Similarity=0.130 Sum_probs=44.5
Q ss_pred cEEEEEE-CCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc
Q 013702 318 SFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 383 (438)
Q Consensus 318 ~~~V~~~-dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t 383 (438)
..+++.. ||+++||+.+.+....+.+.++-.--+|+ --+|+-..|+..+++.+++.|++.+.+..
T Consensus 181 ~~~~~~~~dgki~af~~~~~~~~~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~lnLg~ 246 (299)
T PF09924_consen 181 RGFVARVADGKIVAFAIGSPLGGRDGWSIDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLNLGF 246 (299)
T ss_dssp EEEEEEE-TTEEEEEEEEEEEE-TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE---
T ss_pred eEEEEEECCCcEEEEEEEEEccCCccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEEccc
Confidence 4677777 99999999999876455666654555666 35789999999999999988999987544
|
; PDB: 2HQY_A. |
| >TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase | Back alignment and domain information |
|---|
Probab=81.78 E-value=5.8 Score=38.54 Aligned_cols=62 Identities=18% Similarity=0.284 Sum_probs=49.1
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEcH-HHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCC
Q 013702 358 GQGDKLLDYIEKKAASLGLDMLFLLTT-RTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427 (438)
Q Consensus 358 GiG~~Ll~~l~~~a~~~g~~~l~l~t~-~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~ 427 (438)
+-...|+..+.+.|++.|+.+|++.+. ....+|++.||...+.-+ ..| +..+.+||-+.+..
T Consensus 21 ~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~~~~~~g~~~e~~i~------~~f--~g~~~~~~~~~~~~ 83 (266)
T TIGR03827 21 NDVEALIPDLDALAKKEGYTKIIAKVPGSDKPLFEERGYLEEAKIP------GYF--NGHDAYFMSKYLDE 83 (266)
T ss_pred ccHHHHHHHHHHHHHHcCCcEEEEEccHHHHHHHHHCCCeEEEecc------ccc--CCCceEEEEEcCch
Confidence 457889999999999999999999994 567999999999987542 122 33578888777654
|
Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution. |
| >PHA01733 hypothetical protein | Back alignment and domain information |
|---|
Probab=81.31 E-value=4.5 Score=36.07 Aligned_cols=119 Identities=15% Similarity=0.131 Sum_probs=65.6
Q ss_pred EEEECCccCHHHHHHHHHHH---HHcCcC-CcCC-HHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcc
Q 013702 279 GTRTAKVTDLSGIKQIIQPL---VESGAL-VRRT-DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 353 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~---~~~~~~-~~~~-~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~ 353 (438)
.|||+|.+|+..+.+-..+. +-+... .+.. .-.+...-...+....+|++++.....+...++.+.++.+..+.=
T Consensus 4 ~IrpaT~~d~~~l~~n~r~~Dr~E~ealg~~p~~l~~~~~~s~~~v~~~~~nG~l~aI~Gv~~d~~~~vG~pWlV~T~~v 83 (153)
T PHA01733 4 NNRPATQADATEVAQNLRQEDREEIEGLGHSPLALHLSLDVSENVVAFVAPDGSLAGVAGLVEDMGNRVGEIWMVCTPAI 83 (153)
T ss_pred ccccccHHHHHHHHccCCHHHHHHHHHhCCCcccchhhhhccccceEEEecCCcEEEEecccccccCCCCceeEEecHHh
Confidence 38899999986666522221 111111 1111 111122223446667789999999988643455666665665443
Q ss_pred ccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 354 CRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
.+ +-...++.+-.+..+ ..+..++-.+ ..+++|.+.+||+....
T Consensus 84 ~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~lGF~f~~~ 132 (153)
T PHA01733 84 EK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRKLGFKGLRY 132 (153)
T ss_pred Hh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHHcCceeecc
Confidence 33 233444444444433 3344444333 47899999999997653
|
|
| >PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
Probab=80.16 E-value=4.2 Score=33.40 Aligned_cols=46 Identities=17% Similarity=0.224 Sum_probs=33.0
Q ss_pred EEEEEECC-EEEEEEEEeeec----------------------CCCeEEEEEEEECccccCCcHHHHHH
Q 013702 319 FYVVEREG-QIIACAALFPFF----------------------KEKCGEVAAIGVSPECRGQGQGDKLL 364 (438)
Q Consensus 319 ~~V~~~dg-~iVG~~~l~~~~----------------------~~~~~~I~~v~V~p~yRgqGiG~~Ll 364 (438)
.+++.+++ ++||++.+.... ....+++..++|+|+||+...-..|+
T Consensus 32 h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 32 HLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred EEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 44444544 499999875311 12678999999999999987777665
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 438 | ||||
| 2r98_A | 456 | Crystal Structure Of N-Acetylglutamate Synthase (Se | 1e-34 | ||
| 2r8v_A | 456 | Native Structure Of N-Acetylglutamate Synthase From | 1e-34 | ||
| 3e0k_A | 150 | Crystal Structure Of C-Termianl Domain Of N-Acetylg | 8e-26 | ||
| 3s6k_A | 467 | Crystal Structure Of Xcnags Length = 467 | 5e-06 | ||
| 2buf_A | 300 | Arginine Feed-Back Inhibitable Acetylglutamate Kina | 2e-05 | ||
| 2bty_A | 282 | Acetylglutamate Kinase From Thermotoga Maritima Com | 2e-04 | ||
| 2gan_A | 190 | Crystal Structure Of A Putative Acetyltransferase F | 4e-04 |
| >pdb|2R8V|A Chain A, Native Structure Of N-Acetylglutamate Synthase From Neisseria Gonorrhoeae Length = 456 | Back alignment and structure |
|
| >pdb|3E0K|A Chain A, Crystal Structure Of C-Termianl Domain Of N-Acetylglutamate Synthase From Vibrio Parahaemolyticus Length = 150 | Back alignment and structure |
|
| >pdb|3S6K|A Chain A, Crystal Structure Of Xcnags Length = 467 | Back alignment and structure |
|
| >pdb|2BUF|A Chain A, Arginine Feed-Back Inhibitable Acetylglutamate Kinase Length = 300 | Back alignment and structure |
|
| >pdb|2BTY|A Chain A, Acetylglutamate Kinase From Thermotoga Maritima Complexed With Its Inhibitor Arginine Length = 282 | Back alignment and structure |
|
| >pdb|2GAN|A Chain A, Crystal Structure Of A Putative Acetyltransferase From Pyrococcus Horikoshii, Northeast Structural Genomics Target Jr32. Length = 190 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 438 | |||
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 2e-82 | |
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 5e-40 | |
| 3e0k_A | 150 | Amino-acid acetyltransferase; N-acetylglutamate sy | 5e-54 | |
| 1qst_A | 160 | TGCN5 histone acetyl transferase; GCN5-related N-a | 4e-22 | |
| 3d8p_A | 163 | Acetyltransferase of GNAT family; NP_373092.1, str | 8e-15 | |
| 2q7b_A | 181 | Acetyltransferase, GNAT family; NP_689019.1, struc | 6e-14 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 7e-14 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 2e-05 | |
| 3mgd_A | 157 | Predicted acetyltransferase; structural genomics, | 8e-14 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 1e-13 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 5e-06 | |
| 1z4r_A | 168 | General control of amino acid synthesis protein 5- | 1e-13 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 1e-13 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 1e-05 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 2e-13 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 1e-05 | |
| 3jvn_A | 166 | Acetyltransferase; alpha-beta protein, structural | 2e-13 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 2e-13 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 3e-05 | |
| 2fiw_A | 172 | GCN5-related N-acetyltransferase:aminotransferase | 4e-13 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 4e-13 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 7e-13 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 8e-04 | |
| 4e0a_A | 164 | BH1408 protein; structural genomics, PSI-biology, | 9e-13 | |
| 1yvk_A | 163 | Hypothetical protein BSU33890; ALPHS-beta protein, | 1e-12 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 3e-12 | |
| 2q0y_A | 153 | GCN5-related N-acetyltransferase; YP_295895.1, ace | 3e-12 | |
| 1y9k_A | 157 | IAA acetyltransferase; structural genomics, midwes | 6e-12 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 7e-12 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 1e-11 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 2e-04 | |
| 2aj6_A | 159 | Hypothetical protein MW0638; structural genomics, | 2e-11 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 3e-11 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 3e-11 | |
| 2gan_A | 190 | 182AA long hypothetical protein; alpha-beta protei | 3e-11 | |
| 2dxq_A | 150 | AGR_C_4057P, acetyltransferase; structural genomic | 3e-11 | |
| 3i3g_A | 161 | N-acetyltransferase; malaria, structural genomics, | 4e-11 | |
| 1y9w_A | 140 | Acetyltransferase; structural genomics, Pro struct | 5e-11 | |
| 1n71_A | 180 | AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, | 6e-11 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 6e-11 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 7e-11 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 1e-04 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 1e-10 | |
| 3t9y_A | 150 | Acetyltransferase, GNAT family; PSI-biology, struc | 1e-10 | |
| 1mk4_A | 157 | Hypothetical protein YQJY; alpha-beta-alpha sandwi | 1e-10 | |
| 2vez_A | 190 | Putative glucosamine 6-phosphate acetyltransferase | 2e-10 | |
| 2i00_A | 406 | Acetyltransferase, GNAT family; structural genomic | 2e-10 | |
| 4evy_A | 166 | Aminoglycoside N(6')-acetyltransferase type 1; cen | 3e-10 | |
| 1vkc_A | 158 | Putative acetyl transferase; structural genomics, | 4e-10 | |
| 2atr_A | 138 | Acetyltransferase, GNAT family; MCSG, structural g | 4e-10 | |
| 2ae6_A | 166 | Acetyltransferase, GNAT family; GCN5-related N-ace | 4e-10 | |
| 2ob0_A | 170 | Human MAK3 homolog; acetyltransferase, structural | 6e-10 | |
| 2g3a_A | 152 | Acetyltransferase; structural genomics, PSI, prote | 8e-10 | |
| 3gy9_A | 150 | GCN5-related N-acetyltransferase; YP_001815201.1, | 1e-09 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 1e-09 | |
| 1ghe_A | 177 | Acetyltransferase; acyl coenzyme A complex; HET: A | 2e-09 | |
| 1i12_A | 160 | Glucosamine-phosphate N-acetyltransferase; GNAT, a | 3e-09 | |
| 3t90_A | 149 | Glucose-6-phosphate acetyltransferase 1; GNAT fold | 3e-09 | |
| 3n7z_A | 388 | Acetyltransferase, GNAT family; PSI2, MCSG, struct | 3e-09 | |
| 2r7h_A | 177 | Putative D-alanine N-acetyltransferase of GNAT FA; | 4e-09 | |
| 2i6c_A | 160 | Putative acetyltransferase; GNAT family, structura | 4e-09 | |
| 3c26_A | 266 | Putative acetyltransferase TA0821; NP_394282.1, A | 4e-09 | |
| 3dsb_A | 157 | Putative acetyltransferase; APC60368.2, ST genomic | 5e-09 | |
| 3frm_A | 254 | Uncharacterized conserved protein; APC61048, staph | 7e-09 | |
| 1z4e_A | 153 | Transcriptional regulator; nysgxrc target T2017, G | 1e-08 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 1e-08 | |
| 3kkw_A | 182 | Putative uncharacterized protein; acetyltransferas | 2e-08 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 2e-08 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 2e-08 | |
| 3dr6_A | 174 | YNCA; acetyltransferase, csgid target, essential g | 2e-08 | |
| 2r1i_A | 172 | GCN5-related N-acetyltransferase; YP_831484.1, put | 2e-08 | |
| 3ec4_A | 228 | Putative acetyltransferase from the GNAT family; Y | 2e-08 | |
| 2pdo_A | 144 | Acetyltransferase YPEA; alpha-beta-alpha sandwich, | 2e-08 | |
| 1ufh_A | 180 | YYCN protein; alpha and beta, fold, acetyltransfer | 2e-08 | |
| 1on0_A | 158 | YYCN protein; structural genomics, alpha-beta prot | 2e-08 | |
| 3s6f_A | 145 | Hypothetical acetyltransferase; acyl-COA N-acyltra | 3e-08 | |
| 3pp9_A | 187 | Putative streptothricin acetyltransferase; toxin p | 3e-08 | |
| 2o28_A | 184 | Glucosamine 6-phosphate N-acetyltransferase; struc | 4e-08 | |
| 2hv2_A | 400 | Hypothetical protein; PSI, protein structure initi | 4e-08 | |
| 2oh1_A | 179 | Acetyltransferase, GNAT family; YP_013287.1, struc | 6e-08 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 6e-08 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 6e-08 | |
| 2ozh_A | 142 | Hypothetical protein XCC2953; structural genomics, | 6e-08 | |
| 1y7r_A | 133 | Hypothetical protein SA2161; structural genomics, | 6e-08 | |
| 3ey5_A | 181 | Acetyltransferase-like, GNAT family; structural ge | 8e-08 | |
| 2ge3_A | 170 | Probable acetyltransferase; structural GEN PSI, pr | 8e-08 | |
| 1yr0_A | 175 | AGR_C_1654P, phosphinothricin acetyltransferase; s | 9e-08 | |
| 1u6m_A | 199 | Acetyltransferase, GNAT family; structural genomic | 1e-07 | |
| 4ag7_A | 165 | Glucosamine-6-phosphate N-acetyltransferase; HET: | 2e-07 | |
| 3g8w_A | 169 | Lactococcal prophage PS3 protein 05; APC61042, ace | 2e-07 | |
| 1tiq_A | 180 | Protease synthase and sporulation negative regulat | 3e-07 | |
| 3fix_A | 183 | N-acetyltransferase; termoplasma acidophilum, stru | 4e-07 | |
| 1vhs_A | 175 | Similar to phosphinothricin acetyltransferase; str | 5e-07 | |
| 3bln_A | 143 | Acetyltransferase GNAT family; NP_981174.1, struct | 6e-07 | |
| 2i79_A | 172 | Acetyltransferase, GNAT family; acetyl coenzyme *A | 7e-07 | |
| 3f8k_A | 160 | Protein acetyltransferase; GCN5-related N-acetyltr | 8e-07 | |
| 2eui_A | 153 | Probable acetyltransferase; dimer, structural geno | 8e-07 | |
| 1ygh_A | 164 | ADA4, protein (transcriptional activator GCN5); tr | 9e-07 | |
| 1wwz_A | 159 | Hypothetical protein PH1933; structural genomics, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 2j8m_A | 172 | Acetyltransferase PA4866 from P. aeruginosa; GCN5 | 2e-06 | |
| 3ld2_A | 197 | SMU.2055, putative acetyltransferase; HET: COA; 2. | 3e-06 | |
| 3exn_A | 160 | Probable acetyltransferase; GCN5-related N-acetylt | 3e-06 | |
| 2x7b_A | 168 | N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf | 4e-06 | |
| 1m4i_A | 181 | Aminoglycoside 2'-N-acetyltransferase; COA binding | 4e-06 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 5e-06 | |
| 1sqh_A | 312 | Hypothetical protein CG14615-PA; structural genomi | 6e-06 | |
| 2jlm_A | 182 | Putative phosphinothricin N-acetyltransferase; met | 6e-06 | |
| 2cy2_A | 174 | TTHA1209, probable acetyltransferase; structural g | 8e-06 | |
| 1q2y_A | 140 | Protein YJCF, similar to hypothetical proteins; GC | 1e-05 | |
| 1kux_A | 207 | Aralkylamine, serotonin N-acetyltransferase; enzym | 2e-05 | |
| 1cjw_A | 166 | Protein (serotonin N-acetyltransferase); HET: COT; | 2e-05 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 3e-05 | |
| 3fnc_A | 163 | Protein LIN0611, putative acetyltransferase; GNAT, | 4e-05 | |
| 2pc1_A | 201 | Acetyltransferase, GNAT family; NP_688560.1, struc | 7e-05 | |
| 3efa_A | 147 | Putative acetyltransferase; structural genom 2, pr | 8e-05 | |
| 2kcw_A | 147 | Uncharacterized acetyltransferase YJAB; GNAT fold, | 8e-05 | |
| 3d3s_A | 189 | L-2,4-diaminobutyric acid acetyltransferase; alpha | 9e-05 | |
| 3h4q_A | 188 | Putative acetyltransferase; NP_371943.1, structura | 1e-04 | |
| 3sxn_A | 422 | Enhanced intracellular surviVal protein; GNAT fold | 3e-04 | |
| 3r1k_A | 428 | Enhanced intracellular surviVal protein; GNAT, ace | 3e-04 | |
| 2ree_A | 224 | CURA; GNAT, S-acetyltransferase, decarboxylase, po | 4e-04 | |
| 3qb8_A | 197 | A654L protein; GNAT N-acetyltransferase, acetyltra | 4e-04 | |
| 2b5g_A | 171 | Diamine acetyltransferase 1; structural genomics, | 4e-04 | |
| 2bei_A | 170 | Diamine acetyltransferase 2; SSAT2, BC011751, AAH1 | 6e-04 | |
| 2fe7_A | 166 | Probable N-acetyltransferase; structural genomics, | 8e-04 |
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 260 bits (666), Expect = 2e-82
Identities = 74/193 (38%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Query: 233 LAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIK 292
+++A GV RV +L+G G LL ELF R+G+GT +A + + R A D+ I
Sbjct: 262 ISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIA 321
Query: 293 QIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352
+I+PL E G L+ R+ E L + F ++E +G + CAAL F + CGE+A + VSP
Sbjct: 322 ALIRPLEEQGILLHRSREYLENHISEFSILEHDGNLYGCAALKTFAEADCGEIACLAVSP 381
Query: 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRIN 412
+ + G G++LL +I KA +G+ LF L+T T +WF RGF+ S + +PE RRK
Sbjct: 382 QAQDGGYGERLLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDELPETRRKDYR 441
Query: 413 LS-RNSKYYMKKL 424
+ RNS +++L
Sbjct: 442 SNGRNSHILVRRL 454
|
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* Length = 456 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 5e-40
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYG 60
+ AG +R EA L + V + SGNFL A+ GV+DG D
Sbjct: 116 QQFAGTVRSRFEAALC--------GSVSGFA--RAPSVPLVSGNFLTARPIGVIDGTDME 165
Query: 61 ATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI 120
G ++K D +R +LD G +V + LG+S G+ N + + A + A++++A+KL+ +
Sbjct: 166 YAGVIRKTDTAALRFQLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYL 225
Query: 121 IDGP-ILDESGHLIRFLTLQEADSLIRQ 147
I G L L+ QEA SL
Sbjct: 226 TLSDGISRPDGTLAETLSAQEAQSLAEH 253
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} Length = 150 | Back alignment and structure |
|---|
Score = 176 bits (447), Expect = 5e-54
Identities = 52/148 (35%), Positives = 90/148 (60%)
Query: 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFP 336
E R A + D+ GI ++I PL E G LVRR+ E+L + + F ++E++G II CAAL+P
Sbjct: 3 AEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYP 62
Query: 337 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFR 396
+ +E+ E+A + + P+ R +G LL+Y++ ++ S ++ +F+LTT + WF+ +GF
Sbjct: 63 YSEERKAEMACVAIHPDYRDGNRGLLLLNYMKHRSKSENINQIFVLTTHSLHWFREQGFY 122
Query: 397 ECSIEMIPEERRKRINLSRNSKYYMKKL 424
E ++ +P ++ N R SK L
Sbjct: 123 EVGVDYLPGAKQGLYNFQRKSKILALDL 150
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160 | Back alignment and structure |
|---|
Score = 91.5 bits (227), Expect = 4e-22
Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Query: 288 LSGIKQIIQ---PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGE 344
L +K I P + +V+ + +S +++ + ++I + ++ E
Sbjct: 18 LIDLKNIFSRQLPKMPKEYIVK---LVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAE 74
Query: 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA-DWFKSRGFRECSIEMI 403
VA + V+ + +G G +L++ + ++ L A +FK +GF + M
Sbjct: 75 VAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTK-EHRMP 133
Query: 404 PEERRKRI 411
E+ + I
Sbjct: 134 QEKWKGYI 141
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} Length = 163 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 8e-15
Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 19/159 (11%)
Query: 281 RTAKVTDLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY---------VVEREGQII 329
+ + + I + E + R D+ L+ ++ Y + I+
Sbjct: 7 IEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIV 66
Query: 330 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD- 388
L + + V R G KLLD + +D ++L T
Sbjct: 67 GTIGLIRL-DNNMSALKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFIS 125
Query: 389 ---WFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424
++ + GFRE +P L ++++Y + L
Sbjct: 126 AQYFYSNNGFREIKRGDLPSSFP---KLDVDNRFYYRNL 161
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} Length = 181 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 6e-14
Identities = 23/154 (14%), Positives = 62/154 (40%), Gaps = 20/154 (12%)
Query: 287 DLSGIKQIIQPL--VESGALVRRTDEELLKALDSFY--------VVEREGQIIACAALFP 336
L+ + +I +E+ ++ +++ + ++++Y + +++ AL
Sbjct: 31 HLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLR 90
Query: 337 FFKEKCGEVAAIGVSPECRGQ--GQGDKLLDYIEKKAASLGLDMLFLLTTRTAD----WF 390
+K + P+ RG G KL + A + + L T ++
Sbjct: 91 -IDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFY 149
Query: 391 KSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424
+++GF++ + + + + R+S+ Y+K L
Sbjct: 150 ENQGFKQITRDELDVDYI---FPDRDSRIYVKLL 180
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 7e-14
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
I G ++ VG+S G L A+ + G GEV +VD + +R +D G +
Sbjct: 125 INAAGATA----VGLSGHDGRLLTARPVP--NSAQLGFVGEVARVDPSVLRPLVDYGYIP 178
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDE---SGHLIRFLTLQ 139
+++++ SG+ N N VA A A+ A+KLI + D IL+ LI+ + ++
Sbjct: 179 VIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIK 238
Query: 140 EADSLIRQRV 149
+I
Sbjct: 239 GVKKMIEDGK 248
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} Length = 298 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 272
+GV+ ++DG LL E+ +G GTM+
Sbjct: 265 AQGVKTASIIDGRRQHSLLHEIMSDEGAGTMI 296
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} Length = 157 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 8e-14
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 19/142 (13%)
Query: 281 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDS--------FYVVEREGQIIA 330
R A + D+S + I + + E D+EL + ++ ++ E QIIA
Sbjct: 5 RKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIA 64
Query: 331 CAAL--------FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 382
AA+ + + G + + P RG G +LD + +A + + L+
Sbjct: 65 TAAIAFIDFPPTYTNKTGRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLV 124
Query: 383 TTRTADWF-KSRGFRECSIEMI 403
++ K GF++ +
Sbjct: 125 ASKLGRPVYKKYGFQDTDEWLE 146
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 1e-13
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
I G + VG G + A+ D G GEV V+ + L+ G +
Sbjct: 138 INTTGGRA----VGFCGTDGRLVLARPH---DQEGIGFVGEVNSVNSEVIEPLLERGYIP 190
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDE---SGHLIRFLTLQ 139
++S++ +G+ N N VA A A+ A+KLI + D IL++ LI L +
Sbjct: 191 VISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIP 250
Query: 140 EADSLIRQ 147
++ LI Q
Sbjct: 251 QSRELIAQ 258
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* Length = 321 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 5e-06
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYE 278
+GV+ H++DG I LLLE+F G+GTM+ Y
Sbjct: 277 AQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGSGYH 314
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168 | Back alignment and structure |
|---|
Score = 67.7 bits (165), Expect = 1e-13
Identities = 20/129 (15%), Positives = 48/129 (37%), Gaps = 11/129 (8%)
Query: 288 LSGIKQIIQPLVESGALVRRTDEELLKALDS----FYVVEREGQIIACAALFPFFKEKCG 343
L G++ + L R E + + + + ++G++I F +
Sbjct: 26 LVGLQNVFS-----HQLPRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFT 80
Query: 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA-DWFKSRGFRECSIEM 402
E+ V+ + +G G L++++++ + A +FK +GF + I++
Sbjct: 81 EIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSK-DIKV 139
Query: 403 IPEERRKRI 411
I
Sbjct: 140 PKSRYLGYI 148
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 1e-13
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 11/129 (8%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---DGVDYGATGEVKKVDVTRMRERLDGG 80
I HG + VG++ A R+ V D G G+V +V+ M + + G
Sbjct: 114 INAHGPYA----VGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAG 169
Query: 81 CLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILD---ESGHLIRFL 136
+ ++S L + G V N N A A A A+ A+KL+ + D + + L+ +
Sbjct: 170 RIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEI 229
Query: 137 TLQEADSLI 145
L+
Sbjct: 230 DTGTLAQLL 238
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 Length = 299 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 275
GV H++DG + +L+ELF G GT V
Sbjct: 257 IGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRG 291
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-13
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
+ HG + VG+ + A+++ D G G+VKKV+ + ++ +
Sbjct: 110 LNLHGGRA----VGICGKDSKLIVAEKET--KHGDIGYVGKVKKVNPEILHALIENDYIP 163
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEAD 142
+++ +G G N N A A ++ A+KLI + D +L + G LI LT EA+
Sbjct: 164 VIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKD-GKLISTLTPDEAE 222
Query: 143 SLIRQ 147
LIR
Sbjct: 223 ELIRD 227
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 Length = 282 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 275
R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 246 RGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKEL 280
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} Length = 166 | Back alignment and structure |
|---|
Score = 67.0 bits (164), Expect = 2e-13
Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 30/165 (18%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVR----------RTDEELLKALDS----FYVVEREG 326
R AK DL + ++ L + ++ + + LD YV E +
Sbjct: 6 RRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDD 65
Query: 327 QIIACAALFPFF-------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 379
II + + + E R +G ++L+ IE++ G+ +
Sbjct: 66 VIIGFITGHFCELISTVSKLVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEI 125
Query: 380 FLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 420
F+ +++ +G E + RK +N + ++
Sbjct: 126 FVEVWDFNKGALEFYNKQGLNEHIHYL-----RKPLNRLEHHHHH 165
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 2e-13
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVTRMR 74
I RHG S+ +G++ + AK+ V + +D G GEV V+V +
Sbjct: 115 INRHGGSA----IGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLN 170
Query: 75 ERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLI 133
+ G + +++ +G S+GE N N VA A A++A+KL+ + + ++D+ G ++
Sbjct: 171 MLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVL 230
Query: 134 RFLTLQEADSLIRQ 147
L+ ++ + LI
Sbjct: 231 TGLSTEQVNELIAD 244
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 Length = 300 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 3e-05
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 275
+ GV H++DG + +LLE+F G+GT++++
Sbjct: 263 QGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 Length = 172 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 4e-13
Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 27/166 (16%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEEL---------------LKALDSFYVVERE 325
R D + I +E ++E+ + + +
Sbjct: 11 RPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQ 70
Query: 326 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTR 385
G + A+L + + + V P+ G+ G L+D +EK A + G +L + +
Sbjct: 71 GVPVGFASL-----KGPDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASD 125
Query: 386 TA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSG 430
A ++F RG+ + N M K L D++
Sbjct: 126 NAAEFFAKRGYVAKQRNTVSINGEWLAN------TTMTKSLADSAA 165
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} Length = 279 | Back alignment and structure |
|---|
Score = 68.3 bits (168), Expect = 4e-13
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
+R+ G S + + +AA D YG G+V ++ + E L+ +
Sbjct: 123 LRQAGVSC----QQLKSDIKHVVAADYL---DKDTYGYVGDVTHINKRVIEEFLENRQIP 175
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEAD 142
IL++LGYS G++LN N +ATA A+A+ ADKLI + + +L+ G ++ +T +
Sbjct: 176 ILASLGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVLEN-GAVLEKITSHQVQ 234
Query: 143 SLIRQRV 149
I V
Sbjct: 235 EKIDTAV 241
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} Length = 467 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 7e-13
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 42 SGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNT 101
+G A+ ++ YG GEVK V++ + L G + ++++LG + SG++LN N
Sbjct: 158 TGGVFEAEY---LNRDTYGLVGEVKAVNLAPIEASLQAGSIPVITSLGETPSGQILNVNA 214
Query: 102 YEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTL-QEADSLIRQ 147
A ++ K+I + +LD G LI + L E D L++Q
Sbjct: 215 DFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLMQQ 262
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} Length = 467 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 8e-04
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 10/137 (7%)
Query: 242 RGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQ-IIQPLVE 300
+ + T L ELF G GT+V G R + T + + L+E
Sbjct: 281 DRLPLESSVSITRPADLAKELFTHKGSGTLV----RRGERVLRATSWDELDLPRLTSLIE 336
Query: 301 SGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI---GVSPECRGQ 357
S + R + E A L + + V + +G+
Sbjct: 337 S-SFGRTLVPDYFSNTKLLRAYVSEN-YRAAVILTDEGMLGASALIYLDKFAVLDDAQGE 394
Query: 358 GQGDKLLDYIEKKAASL 374
G G + + + ++ L
Sbjct: 395 GLGRAVWNVMREETPQL 411
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* Length = 164 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 9e-13
Identities = 23/162 (14%), Positives = 44/162 (27%), Gaps = 38/162 (23%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGAL----------VRRTDEELLKALDS----FYVVEREG 326
R A V D + ++ + E+ A+ V E
Sbjct: 4 REATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDER 63
Query: 327 QIIACAALFPFF---------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
+ I ++ + K ++ + V RG G G + + I + +D
Sbjct: 64 EKIGAYSVIHLVQTPLLPTMQQRKTVYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVD 123
Query: 378 MLFLLTTRTADW-------FKSRGFRECSIEMIPEERRKRIN 412
+ L D+ + S G R M +
Sbjct: 124 AIELD---VYDFNDRAKAFYHSLGMRCQKQTM-----ELPLL 157
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 163 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 1e-12
Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 319 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378
Y ++ L + + E+ I V + +G G +L+ +KA LG D
Sbjct: 41 CYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADT 99
Query: 379 LFLLTTRTADW----FKSRGFRECSIE 401
+ + T ++ ++ GFR +I+
Sbjct: 100 IEIGTGNSSIHQLSLYQKCGFRIQAID 126
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* Length = 258 | Back alignment and structure |
|---|
Score = 65.6 bits (161), Expect = 3e-12
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
++H ++ VG+ + G+ + + + G G + + L+ G L
Sbjct: 92 AKKHQIAA----VGLFLGDGDSVKVTQLDE----ELGHVGLAQPGSPKLINSLLENGYLP 143
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTLQEAD 142
++S++G + G+++N N + ATA A + A LI + D ILD G I +T +A+
Sbjct: 144 VVSSIGVTDEGQLMNVNADQAATALAATLGA-DLILLSDVSGILDGKGQRIAEMTAAKAE 202
Query: 143 SLIRQRV 149
LI Q +
Sbjct: 203 QLIEQGI 209
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} Length = 153 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 3e-12
Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 23/144 (15%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------VVEREGQI 328
R + DL + + + + T + + V+E G
Sbjct: 5 RPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAP 64
Query: 329 IACAALFPF---------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 379
+A L ++K G + + V P R +G G L++ E + A G+
Sbjct: 65 LAGIGLMVIEWPPHPSHPLQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFA 124
Query: 380 FLLTTRTADWF-KSRGFRECSIEM 402
L T G+ + EM
Sbjct: 125 VLHATEMGQPLYARMGWSPTT-EM 147
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 6e-12
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 319 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378
YV ++ G +I L + K E+ I V+ +G+G G KLL + + A G+
Sbjct: 39 TYVAKQGGSVIGVYVLLET-RPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSK 97
Query: 379 LFLLTTRTADW----FKSRGFRECSIE 401
L + T ++ ++ GFR SI+
Sbjct: 98 LEVGTGNSSVSQLALYQKCGFRIFSID 124
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* Length = 460 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 1e-11
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 21/156 (13%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
IR G + V G F A +VD G GE + + + + G
Sbjct: 144 IRDAGGRA----AAVP--RGVFEA----DIVDADKLGRVGEPRHIHLDLVGSAARAGQAA 193
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGP-ILDESGHLIRFLTL-QEA 141
IL+ LG + G ++N N A A++ K++ + +LDE G ++ + L +
Sbjct: 194 ILACLGETPDGTLVNINADVAVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDF 253
Query: 142 DSLIRQ---------RVKQSEIAANYVKAVAEEDIT 168
L++ ++++ + + + + IT
Sbjct: 254 GDLMQADWVNGGMRLKLEEIKRLLDDLPLSSSVSIT 289
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* Length = 460 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 23/148 (15%), Positives = 39/148 (26%), Gaps = 33/148 (22%)
Query: 240 CRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLV 299
+ + T L ELF G GT++ R ++ +
Sbjct: 276 LLDDLPLSSSVSITRPSELARELFTHAGSGTLI-------RRGERMVATDDKSSL----- 323
Query: 300 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAI----------- 348
+ G L + Y + F + AAI
Sbjct: 324 DLGRLDNLVKAAFGRPAVEGYWDRLR--------VDRAFVTESYRAAAITTRLDGWVYLD 375
Query: 349 --GVSPECRGQGQGDKLLDYIEKKAASL 374
V + RG+G G + + + A L
Sbjct: 376 KFAVLDDARGEGLGRTVWNRMVDYAPQL 403
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 2e-11
Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 24/151 (15%)
Query: 281 RTAKVTDLSGIKQII---------------QPLVESGALVRRTDEELLKALDSFYVVERE 325
RT + + IKQI + L D Y+ E E
Sbjct: 14 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 73
Query: 326 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-- 383
GQ+IA ++ + + V P+ R G +L +EK A ++ +
Sbjct: 74 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISNTIHK 133
Query: 384 --TRTADWFKSRGFRECSIEMIPEERRKRIN 412
K G++ ++M K I+
Sbjct: 134 NNLPMISLNKDLGYQVSHVKM-----YKDID 159
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} Length = 162 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 3e-11
Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 16/129 (12%)
Query: 309 DEELLKALDSFYVV--EREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDY 366
D L + +G+ + C A+ +E GE+ + + P+ RGQ G+KLL
Sbjct: 40 DLSQLPPQTVIALAIRSPQGEAVGCGAIVLS-EEGFGEMKRVYIDPQHRGQQLGEKLLAA 98
Query: 367 IEKKAASLGLDMLFLLTTRTADW-----FKSRGFRECSIEMIPEERRKRINLSRNSKYYM 421
+E KA L L T + G++ S +
Sbjct: 99 LEAKARQRDCHTL-RLETGIHQHAAIALYTRNGYQTR-------CAFAPYQPDPLSVFME 150
Query: 422 KKLLPDTSG 430
K L D
Sbjct: 151 KPLFADLRS 159
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 3e-11
Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 304 LVRRTDEELLKALD---------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 354
+ + E + AL +F+ ++ C AL GE+ ++ S
Sbjct: 24 MTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKELDTR-HGEIKSMRTSASH 82
Query: 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW------FKSRGFREC 398
+G ++L +I ++A G + L L T A + ++S GF+ C
Sbjct: 83 LRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYC 132
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 190 | Back alignment and structure |
|---|
Score = 61.3 bits (148), Expect = 3e-11
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 29/158 (18%)
Query: 259 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 317
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 318 SFYVVEREGQIIACAALF--------------PFFKEKCGEVAAIGVSPECRGQGQGDKL 363
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 364 LDYIEKKAASLGLDMLFLLTTRTAD----WFKSRGFRE 397
L++ K+ SLG D +++T + ++ +GFRE
Sbjct: 128 LEFAVKRLRSLGKDP-YVVTFPNLEAYSYYYMKKGFRE 164
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} Length = 150 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 3e-11
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 15/137 (10%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKALDS-----FYVVEREGQIIACAAL 334
R A DL G+ ++ Q L S L + + A+ + +V G+ +A A L
Sbjct: 9 RAAGPGDLPGLLELYQVLNPSDPELTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATL 68
Query: 335 FPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TR 385
+ + RG+G G ++ + + A + LLT
Sbjct: 69 LIVPNLTRAARPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPA 128
Query: 386 TADWFKSRGFRECSIEM 402
+++S GF +
Sbjct: 129 VHAFYESCGFVQNKTGF 145
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A Length = 161 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 4e-11
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 12/134 (8%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKALDSFYVV---EREGQIIACAAL 334
R + +DLS +++ L E+ L ++ + V + G+I+ A+L
Sbjct: 24 RVLEESDLSSHLELLGHLTEAPPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASL 83
Query: 335 F--PFFKEKCGEVA---AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW 389
P F V + V P RG G G L+ + + + S G + L ++ +
Sbjct: 84 MIQPKFTRGGRAVGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLP 143
Query: 390 F-KSRGFRECSIEM 402
F + GFR +M
Sbjct: 144 FYEKLGFRAHERQM 157
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 Length = 140 | Back alignment and structure |
|---|
Score = 59.6 bits (144), Expect = 5e-11
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 14/111 (12%)
Query: 318 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
S V EG+I +F + + V R G G +LL IE A G
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYH--LHIDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCR 98
Query: 378 MLFLLTTRTA--DWFKSRGFREC-SIEMIPEERRKRINLSRNSKYYMKKLL 425
++ L + +++K G+RE +E P+ S+++ +K L
Sbjct: 99 LILLDSFSFQAPEFYKKHGYREYGVVEDHPKGH---------SQHFFEKRL 140
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* Length = 180 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 6e-11
Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 7/139 (5%)
Query: 291 IKQIIQPLVES-----GALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEV 345
Q+ L + G EE++ + +++ P + E+
Sbjct: 14 KDQLSDLLRLTWPEEYGDSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWEL 73
Query: 346 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPE 405
+ V R G +L++Y+EK+ AS G ++L T + + E +
Sbjct: 74 HPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDD--LDHGTTLSQTDLYEHTFD 131
Query: 406 ERRKRINLSRNSKYYMKKL 424
+ NL + + +KL
Sbjct: 132 KVASIQNLREHPYEFYEKL 150
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 162 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 6e-11
Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 22/166 (13%)
Query: 281 RTAKVTDLSGIKQIIQPLVE-----------SGALVRRTDEELLKALDSFYVVEREGQII 329
R A +L I Q + + + +E + Y++ E I
Sbjct: 4 RVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITK-KRLYLLVHEEMIF 62
Query: 330 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TR 385
+ A ++ + SP +G G L +EK+A G ++ T R
Sbjct: 63 SMATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHR 122
Query: 386 TADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGI 431
+F+S+GF + E + L S Y K L + S +
Sbjct: 123 MIRFFESKGFTKI------HESLQMNRLDFGSFYLYVKELENQSIV 162
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Length = 464 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 7e-11
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 24 IRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83
+ + G + ++ SG F A +D Y G +K V + + G L
Sbjct: 134 LEQLGVRA----RPIT--SGVFTADY----LDKDKYKLVGNIKSVTKEPIEASIKAGALP 183
Query: 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICI--IDGPILDESGHLIRFLTL-QE 140
IL++L ++SG++LN N A A E K++ + G I +G I + L +E
Sbjct: 184 ILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEE 243
Query: 141 ADSLIRQ 147
D L++Q
Sbjct: 244 YDDLMKQ 250
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* Length = 464 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 15/141 (10%)
Query: 241 RRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV--ASDLYEGTRTAKVTDLSGIKQIIQPL 298
+ + + L ELF G GTM+ L + + + +++ +Q
Sbjct: 269 DYLPRSSSVAIINVQ-DLQKELFTDSGAGTMIRRGYKLVKRSSIGEFPSADALRKALQRD 327
Query: 299 VES---GALVRRTDEELLKALDSFYVVE--REGQIIACAALFPFFKEKCGEVAAIGVSPE 353
V L + Y E I+ P + S
Sbjct: 328 AGISSGKESVASYLRYLENSDFVSYADEPLEAVAIVKKDTNVPT-------LDKFVCSDA 380
Query: 354 CRGQGQGDKLLDYIEKKAASL 374
D + + + + +L
Sbjct: 381 AWLNNVTDNVFNVLRRDFPAL 401
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* Length = 307 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 1e-10
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 38 VSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVL 97
+ SG F A +D Y G +K V + + G L IL++L ++SG++L
Sbjct: 142 RPITSGVFTADY----LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQML 197
Query: 98 NCNTYEVATACALAIEADKLICI--IDGPILDESGHLIRFLTL-QEADSLIRQ 147
N N A A E K++ + G I +G I + L +E D L++Q
Sbjct: 198 NVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQ 250
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} Length = 150 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 1e-10
Identities = 21/139 (15%), Positives = 49/139 (35%), Gaps = 16/139 (11%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTD-EELLKALDS-----FYVVEREGQIIACAAL 334
R +D + Q+ + + G D ++ LK + + ++ +E +II + +
Sbjct: 9 RLFNNSDFEKLNQLCKLYDDLGYPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGM 68
Query: 335 FPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-- 388
+ + A + E R +G G +LL E+ + L + L + +
Sbjct: 69 CKMMFYEKNAEYMRILAFVIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERL 128
Query: 389 ----WFKSRGFRECSIEMI 403
+ G+ +
Sbjct: 129 SAHKLYSDNGYVSNTSGFT 147
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 Length = 157 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 1e-10
Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 6/123 (4%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK-ALDSFYVVEREGQIIACAALFPFFK 339
RT +D + ++ L + + D+ ++ + F
Sbjct: 5 RTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQS 64
Query: 340 E-KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTR--TADW--FKSRG 394
+ + + GV P+ R G +L D + G + +T+ G
Sbjct: 65 DPETAYIHFSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLG 124
Query: 395 FRE 397
F
Sbjct: 125 FDI 127
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* Length = 190 | Back alignment and structure |
|---|
Score = 58.8 bits (142), Expect = 2e-10
Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 16/157 (10%)
Query: 262 LFKRDGMGTMVASDLYEGT--RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS 318
LF + V + L R +D G +++ L G + + + +
Sbjct: 30 LFSPSLISPDVLAVLPADYTIRPLCRSDYKRGYLDVLRVLTTVGDINEEQWNSRYEWIRA 89
Query: 319 -------FYVVEREGQIIACAALF--PFFKEKCGEVAAI---GVSPECRGQGQGDKLLDY 366
V + EG+I+ +L F G V I V +G+ G +++
Sbjct: 90 RSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSLGMVGHIEDIAVEKGQQGKKLGLRIIQA 149
Query: 367 IEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEM 402
++ A +G L + + F GF+ +EM
Sbjct: 150 LDYVAEKVGCYKTILDCSEANEGFYIKCGFKRAGLEM 186
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 406 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 2e-10
Identities = 24/169 (14%), Positives = 59/169 (34%), Gaps = 18/169 (10%)
Query: 281 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKA---LDSFYVVEREGQII 329
+ + + +++ + ESG +R + + L + E Q+I
Sbjct: 13 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 72
Query: 330 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 383
+ A++P K G V +G PE G L+ ++ + L
Sbjct: 73 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQW-ISYLF 131
Query: 384 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGII 432
+++ +G+ S ++ + R ++ + +++L D +
Sbjct: 132 PYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVPGMIERLAVDHPDVF 180
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A Length = 166 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 3e-10
Identities = 21/130 (16%), Positives = 36/130 (27%), Gaps = 13/130 (10%)
Query: 281 RTAKVTDLSGIKQIIQPLV--ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF 338
+ A L ++ L + ++ + L + + + Q IA F
Sbjct: 25 KPASEASLKDWLELRNKLWSDSEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRF 84
Query: 339 -------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTA 387
G + I V P R G L+ E A +
Sbjct: 85 EYVNGTETSPVGFLEGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFASDAALDNVISH 144
Query: 388 DWFKSRGFRE 397
+S GF+E
Sbjct: 145 AMHRSLGFQE 154
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 4e-10
Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 20/145 (13%)
Query: 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-------DEELLKAL-----DSFYVVERE 325
E T + IK++ + + S + EEL ++L F+V E
Sbjct: 10 EYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNE 69
Query: 326 -GQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 380
+++ + K + I V RG G G LL E+ A G +
Sbjct: 70 RSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIV 129
Query: 381 LLT--TRTA-DWFKSRGFRECSIEM 402
L A W++ RG++ ++ M
Sbjct: 130 LRVEIDNPAVKWYEERGYKARALIM 154
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 Length = 138 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 4e-10
Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 5/95 (5%)
Query: 307 RTDEELLKALD---SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKL 363
E L +AL Y+ ++ L V + V P + QG G L
Sbjct: 29 HQTEMLEQALSHSLVIYLALDGDAVVGLIRLVGDG-FSSVFVQDLIVLPSYQRQGIGSSL 87
Query: 364 LDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRE 397
+ L T F +S GF
Sbjct: 88 MKEALGNFKEAYQVQLATEETEKNVGFYRSMGFEI 122
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 166 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 4e-10
Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 9/110 (8%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAAL 334
R D + + Q + L A +V Q+ +
Sbjct: 11 RLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEV 70
Query: 335 FPFFKEKCGEVAA---IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 381
P + IGVSP+ + QG G LL YI+ A G+ L L
Sbjct: 71 HPPTSLAAHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSL 120
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* Length = 170 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 6e-10
Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 16/130 (12%)
Query: 310 EELLKALDSFYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 367
+++L+ + + + C + +K + +G R G G K+L+++
Sbjct: 38 KDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLGCLAPYRRLGIGTKMLNHV 97
Query: 368 EKKAASLG-LDMLFL---LTTRTA-DWFKSRGFRECSIEMIPEERRKR--INLSRNSKYY 420
G D ++L ++ +A D+++ GF E +K + +
Sbjct: 98 LNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEI-------IETKKNYYKRIEPADAHV 150
Query: 421 MKKLLPDTSG 430
++K L SG
Sbjct: 151 LQKNLKVPSG 160
|
| >2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 Length = 152 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 8e-10
Identities = 16/109 (14%), Positives = 34/109 (31%), Gaps = 11/109 (10%)
Query: 318 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
+ + + + V + V RGQG KLL E++A G
Sbjct: 53 NITIRNDDNSVTGGLVGHTA--RGWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCM 110
Query: 378 MLFLLTTRTA--DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424
++ T ++ GF + ++ ++ + K+
Sbjct: 111 GAYIDTMNPDALRTYERYGFTKI-------GSLGPLSSGQSITWLEKRF 152
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* Length = 150 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 1e-09
Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 281 RTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALDS------FYVVEREGQIIACAA 333
D ++ + G LV R + F + Q++AC
Sbjct: 7 ERVNDFDGYNWLPLLAKSSQEGFQLVERMLRNRREESFQEDGEAMFVALSTTNQVLACGG 66
Query: 334 LFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 392
+ + G + + V PE R G G LL+ I +A D L L + + +++
Sbjct: 67 YMKQSGQARTGRIRHVYVLPEARSHGIGTALLEKIMSEAFL-TYDRLVLYSEQADPFYQG 125
Query: 393 RGFRECSIEMIP 404
GF+ S E I
Sbjct: 126 LGFQLVSGEKIT 137
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* Length = 165 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 1e-09
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%)
Query: 281 RTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 337
R T L + + + L A + +E L + ++ +G I A
Sbjct: 24 RQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIR 83
Query: 338 F-------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 386
+ I V P R +G +L+ +++ + G + T T +
Sbjct: 84 HDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTIS 143
Query: 387 ADWFKSRGFRE 397
++ GF E
Sbjct: 144 QKVHQALGFEE 154
|
| >1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A* Length = 177 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 2e-09
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 300 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEK---CGEVAAIGVSPECRG 356
++ A ++ +VV + ++A A L K EV + V P RG
Sbjct: 45 QAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARG 104
Query: 357 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD----WFKSRGFREC 398
+G G +L+D +E+ A +L L T ++ + +
Sbjct: 105 RGLGRQLMDEVEQVAVKHKRGLLH-LDTEAGSVAEAFYSALAYTRV 149
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A Length = 160 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 3e-09
Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 24/146 (16%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFY------------------VV 322
R + DL + + ++ L G + + +L+K + V
Sbjct: 11 RRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVD 70
Query: 323 EREGQIIACAALFPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
+R + A + K CG + I V+ + +GQG G L+D + G
Sbjct: 71 KRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCY 130
Query: 378 MLFLLTTRTADWF-KSRGFRECSIEM 402
+ L F + GF +EM
Sbjct: 131 KIILDCDEKNVKFYEKCGFSNAGVEM 156
|
| >3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} Length = 149 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 3e-09
Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 15/137 (10%)
Query: 281 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS--------FYVVEREGQIIAC 331
R +++D G +++ L +G++ + + + S E G+I A
Sbjct: 8 RKLEISDKRKGFIELLGQLTVTGSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAAT 67
Query: 332 AAL-----FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 386
++ F K G + + V RG+ G K+++++ S+G + L +
Sbjct: 68 GSVMIEKKFLRNCGKAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVE 127
Query: 387 ADWF-KSRGFRECSIEM 402
F + G SI+M
Sbjct: 128 NKVFYEKCGMSNKSIQM 144
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} Length = 388 | Back alignment and structure |
|---|
Score = 57.5 bits (138), Expect = 3e-09
Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 313 LKALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDY 366
+K Y + + A L PF K K G VA + PE R G +LL +
Sbjct: 41 MKESHEVYGIMEGENLAAKLHLIPFHIYIGKEKFKMGGVAGVATYPEYRRSGYVKELLQH 100
Query: 367 IEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 426
+ G + +L +++ G+ C+ ++ + + + + +K+
Sbjct: 101 SLQTMKKDGYT-VSMLHPFAVSFYRKYGWELCANLLVCHMTKSDLVMKKQVNGTVKRFNK 159
Query: 427 D 427
+
Sbjct: 160 E 160
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} Length = 177 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 4e-09
Identities = 22/138 (15%), Positives = 41/138 (29%), Gaps = 19/138 (13%)
Query: 281 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKALDSFYVVEREGQII--A 330
R D ++++++ + LV F + + A
Sbjct: 24 RQVLPQDALLVRRVVESTGFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYA 83
Query: 331 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 390
C P E ++ I V+P + G G LL + G +LF T +
Sbjct: 84 CYGPTPA-TEGTYDLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLF-AETSGIRKY 141
Query: 391 -------KSRGFRECSIE 401
+ GF ++
Sbjct: 142 APTRRFYERAGFSAEAVL 159
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* Length = 160 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 4e-09
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 13/134 (9%)
Query: 281 RTAKVTDLSGIKQIIQPLVE-----SGALVRRTDEELLKALDS---FYVVEREGQIIACA 332
R A+ DL + Q E A+ + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 333 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA----- 387
+ + + + V+P RG G L+ +E A L ++ A
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGL 125
Query: 388 DWFKSRGFRECSIE 401
+ G++ +I
Sbjct: 126 LLYTQLGYQPRAIA 139
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} Length = 266 | Back alignment and structure |
|---|
Score = 56.3 bits (135), Expect = 4e-09
Identities = 18/136 (13%), Positives = 35/136 (25%), Gaps = 21/136 (15%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------------DSFYVVERE 325
+D+ IK + G + S YV+
Sbjct: 9 DRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVS 68
Query: 326 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-- 383
G+ +A + + + + V PE RG G ++ + + L
Sbjct: 69 GRPVATIHME-KLPDGSVMLGGLRVHPEYRGSRLGMSIMQETIQFLRG-KTERLRSAVYS 126
Query: 384 --TRTADWFKSRGFRE 397
+ GF +
Sbjct: 127 WNEPSLRLVHRLGFHQ 142
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} Length = 157 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 5e-09
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 18/140 (12%)
Query: 281 RTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKALDS------FYVVEREGQIIAC 331
R A++ DL I + L E L + +KAL ++V +++A
Sbjct: 10 REARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQ 69
Query: 332 AALFP----FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 387
+ + ++ V E R +G + L +YI+ + L
Sbjct: 70 IMYTYEWSDWRNGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKE 129
Query: 388 -----DWFKSRGFRECSIEM 402
++S EC M
Sbjct: 130 NINAKATYESLNMYECDYNM 149
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} Length = 254 | Back alignment and structure |
|---|
Score = 55.4 bits (133), Expect = 7e-09
Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Query: 310 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEK 369
V Q + + +K E+ GV E + QG G ++ Y+ +
Sbjct: 157 SSYNLDDIERLVAYVNHQPVGIVDII--MTDKTIEIDGFGVLEEFQHQGIGSEIQAYVGR 214
Query: 370 KAASLGLDMLFLLTTRTADWFKSRGFRECSIE 401
A + ++ D + +G+ +
Sbjct: 215 MANERPVILVADGKDTAKDMYLRQGYVYQGFK 246
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 1e-08
Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 20/142 (14%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSF-----------YVVEREGQII 329
R A DL + ++ V R + + +F V +I+
Sbjct: 8 REATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIV 67
Query: 330 ACAALF-----PFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT- 383
+ + + + RGQG G +L+ + ++A G ++ L T
Sbjct: 68 GMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTD 127
Query: 384 ---TRTADWFKSRGFRECSIEM 402
+++ GF+ +
Sbjct: 128 KQRPDALRFYEQLGFKASHEGL 149
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 Length = 168 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 1e-08
Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 18/135 (13%)
Query: 281 RTAKVTDLSGIKQIIQ------PLVESGALVRRTDEELLKALDS----FYVVEREGQIIA 330
+ ++ + V + + + + L L S + ++
Sbjct: 30 CRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVG 89
Query: 331 CAALFPFFK----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRT 386
A + K + + VS E R QG L++ ++ +A +LG ++++
Sbjct: 90 ALAAYVLPKFEQPRSEIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYG 149
Query: 387 ----ADWFKSRGFRE 397
+ G RE
Sbjct: 150 DDPAVALYTKLGIRE 164
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} Length = 182 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-08
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 17/136 (12%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 332
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 28 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 87
Query: 333 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW--- 389
+ + + + V+P RG G L+ +E A L ++ +
Sbjct: 88 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCF--NANAA 145
Query: 390 ----FKSRGFRECSIE 401
+ G++ +I
Sbjct: 146 GLLLYTQLGYQPRAIA 161
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 Length = 396 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 2e-08
Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 315 ALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIE 368
L++F V+ RE ++ A+ P + +AA+G++PE RG G L+ +
Sbjct: 46 GLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAVGIAPEYRGDGAAIALIQHTL 105
Query: 369 KKAASLGLDMLFLLTTRTADWFKSRGFRECS 399
++ + + + L ++ G+ +
Sbjct: 106 QEISEQDIPISVLYPATQR-LYRKAGYEQAG 135
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} Length = 176 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-08
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 16/133 (12%)
Query: 281 RTAKVTDLSGIKQIIQPLVE------SGALVRRTDEELLKALDS--FYVVEREGQIIACA 332
RTA + D+ + +++ + R + LL D +++ + +
Sbjct: 27 RTAHIGDVPVLVRLMSEFYQEAGFALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYI 86
Query: 333 ALFPFF-KEKCGEVA---AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----T 384
L F E G V P RG+G G L +++ LG+ L + T
Sbjct: 87 VLTLGFSMEYGGLRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVETGPEDH 146
Query: 385 RTADWFKSRGFRE 397
+ GF E
Sbjct: 147 PARGVYSRAGFEE 159
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} PDB: 3dr8_A* Length = 174 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-08
Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 22/138 (15%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 329
R A D + I +I V A + L ++ V E G +
Sbjct: 7 RFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVT 66
Query: 330 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML----F 380
A+ + + G E + + V P +G+G G KLL + +A G ++
Sbjct: 67 GYASFGDW-RSFDGFRYTVEHS-VYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIE 124
Query: 381 LLTTRTADWFKSRGFREC 398
+ S GF
Sbjct: 125 SQNAASIRLHHSLGFTVT 142
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} Length = 172 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 2e-08
Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 14/131 (10%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------DSFYVVEREGQIIACAAL 334
R A D + + Q++ +EL L + V+ A L
Sbjct: 26 RRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVL 85
Query: 335 FP----FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 386
++ + + V P RG G LL S G +L + T
Sbjct: 86 SFRPNVWYPGPVAILDELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDA 145
Query: 387 ADWFKSRGFRE 397
++++RGF
Sbjct: 146 RRFYEARGFTN 156
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} Length = 228 | Back alignment and structure |
|---|
Score = 53.7 bits (129), Expect = 2e-08
Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 26/194 (13%)
Query: 206 NGLWSS----EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLL-- 259
+W+S + + L RL+ AAAA G+ + D ++
Sbjct: 10 RPVWNSLGGPQSELDVASG-NLRRLDPAYGPFAAAAPGAEAGLASLLQGDADEIWLVEPE 68
Query: 260 -------LELFKRDGMGTMVASDLYEGT-----RTAKVTDLSGIKQIIQPLVESGALVRR 307
+ + + M+A TD+ + + E G
Sbjct: 69 PVAPPPGTRVIRVAPLLQMIADGPVPSFDDPGIVALGETDVPEMTALAL-ATEPGPWASG 127
Query: 308 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 367
T FY V +G++ A A EV+ + PE RG+G +L+ +
Sbjct: 128 TWR-----YGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYRGRGLAARLIRKV 182
Query: 368 EKKAASLGLDMLFL 381
A+ G ++ +L
Sbjct: 183 IAGMAARG-EVPYL 195
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} Length = 144 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-08
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 5/104 (4%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGA--LVRRTDEELLKALDS-FYVVEREGQIIACAALFPF 337
R + D + + + E + S F V E G+++
Sbjct: 7 RVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGYD 66
Query: 338 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 381
G +GV PE RG+G + LL+ +EKK + G + +
Sbjct: 67 GHR--GSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQI 108
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 Length = 180 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 2e-08
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 319 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376
+ + E I+ P ++ + G+ RG+G + L +++ A S+G+
Sbjct: 87 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGI 146
Query: 377 DMLFLLT----TRTADWFKSRGFRECSIEM 402
L L ++ GF+E + M
Sbjct: 147 RKLSLHVFAHNQTARKLYEQTGFQETDVVM 176
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 Length = 158 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 2e-08
Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 319 FYVVEREGQII--ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376
+ + E I+ P ++ + G+ RG+G + L +++ A S+G+
Sbjct: 63 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGI 122
Query: 377 DMLFLLT----TRTADWFKSRGFRECSIEM 402
L L ++ GF+E + M
Sbjct: 123 RKLSLHVFAHNQTARKLYEQTGFQETDVVM 152
|
| >3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans} Length = 145 | Back alignment and structure |
|---|
Score = 51.8 bits (124), Expect = 3e-08
Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 8/103 (7%)
Query: 306 RRTDEELLKALDS----FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGD 361
T E L + LD +GQ+I + + V R G G
Sbjct: 34 PPTPETLWRILDRAAVFVLARTPDGQVIGFVNALSDG-ILAASIPLLEVQAGWRSLGLGS 92
Query: 362 KLLDYIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEMI 403
+L+ + + L M+ L F + G + + +
Sbjct: 93 ELMRRVLTELG--DLYMVDLSCDDDVVPFYERLGLKRANAMFL 133
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} Length = 187 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-08
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 309 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIE 368
+E + K Y+ QII L + + I V + R G G +L+ +
Sbjct: 68 NEYINKPNQIIYIALLHNQIIGFIVLKKNW-NNYAYIEDITVDKKYRTLGVGKRLIAQAK 126
Query: 369 KKAASLGLDMLFLLTTRT---ADWF-KSRGFRECSIEM 402
+ A + + L T A F + GF +
Sbjct: 127 QWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGFDF 164
|
| >2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A Length = 184 | Back alignment and structure |
|---|
Score = 52.3 bits (125), Expect = 4e-08
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 14/136 (10%)
Query: 281 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS-----FYVVE--REGQIIACA 332
R DL+ G +++ L E+G + + + + VVE GQI+A A
Sbjct: 42 RPLCTADLNRGFFKVLGQLTETGVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVATA 101
Query: 333 AL-----FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 387
L F K G V + VS ECRG+ G LL + + L + L
Sbjct: 102 TLIIEHKFIHSCAKRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNCYKITLECLPQN 161
Query: 388 DWF-KSRGFRECSIEM 402
F K G+
Sbjct: 162 VGFYKKFGYTVSEENY 177
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 Length = 400 | Back alignment and structure |
|---|
Score = 54.0 bits (129), Expect = 4e-08
Identities = 13/117 (11%), Positives = 39/117 (33%), Gaps = 7/117 (5%)
Query: 317 DSFYVVEREGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKK 370
Y + Q+ + PF + + + PE RG+G ++ +
Sbjct: 47 TQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLAD 106
Query: 371 AASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427
A + + + L + +++ G+ + + + + + +K++
Sbjct: 107 LAKQKVALSY-LAPFSYPFYRQYGYEQTFEQAEYTIKTEDWPRVKRVPGTIKRVSWA 162
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} Length = 179 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 6e-08
Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 29/147 (19%)
Query: 281 RTAKVTDLSGIKQIIQ----PLVESG------ALVRRTDEELLKALDS--FYVVEREGQI 328
R A TD I ++ L ESG L + + ++ + E E
Sbjct: 17 RFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGA 76
Query: 329 IACAALF-------------PFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 375
+A A + +K + I VS G +++ + EK +
Sbjct: 77 LAGAMIIRKTPSDWDTDLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMS 136
Query: 376 LDMLFLLT----TRTADWFKSRGFREC 398
+ + L + GF+
Sbjct: 137 VPFIRLDCIESNETLNQMYVRYGFQFS 163
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* Length = 160 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 6e-08
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 310 EELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEK 369
+ + ++ A A E + I V P+ + +G G LL+++
Sbjct: 33 FGNQGERYLNLKLTADDRMAAFAITQVVLDE--ATLFNIAVDPDFQRRGLGRMLLEHLID 90
Query: 370 KAASLGLDMLFL 381
+ + G+ L+L
Sbjct: 91 ELETRGVVTLWL 102
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} Length = 288 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 6e-08
Identities = 13/123 (10%), Positives = 39/123 (31%), Gaps = 6/123 (4%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKALD--SFYVVEREGQIIACAALFP 336
R A D+ + I ++ E+ + + + + + +F
Sbjct: 23 RYATPDDIEDMVSIFIDAYNFPGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFF 82
Query: 337 FFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFR 396
+ K + +GV + +G G ++ + + + +++ +K F
Sbjct: 83 Y--NKQAWIGLMGVKKAYQRRGIGTEVFRRLLEIGRRKVDTIRLDASSQGYGLYKKFKFV 140
Query: 397 ECS 399
+
Sbjct: 141 DEY 143
|
| >2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV} Length = 142 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 6e-08
Identities = 18/93 (19%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
Query: 306 RRTDEELLKALD-SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 364
+ +A+D S A + + V PE RG+G L+
Sbjct: 32 DIPLALVQRAIDHSLCFGGFVDGRQVAFARVISDYATFAYLGDVFVLPEHRGRGYSKALM 91
Query: 365 DYIEKKAASLGLDMLFLLTTRTADWFKSRGFRE 397
D + GL L T+ + GF
Sbjct: 92 DAVMAHPDLQGLRRFSLATSDAHGLYARYGFTP 124
|
| >1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1 Length = 133 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 6e-08
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 8/115 (6%)
Query: 291 IKQIIQPLVESGALVRRTDEELLKALDS---FYVVEREGQIIACAALFPFFKEKCGEVAA 347
+ + +G + +T E K L + + + ++I + ++
Sbjct: 11 CEDYCALRINAG-MSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIGDG-GTVFQIVD 68
Query: 348 IGVSPECRGQGQGDKLLDYIEKKAASLGLD--MLFLLTTRTADWF-KSRGFRECS 399
I V +GQ G ++++I K ++ ++ + L+ AD GF
Sbjct: 69 IAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTE 123
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} Length = 181 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 8e-08
Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 19/130 (14%)
Query: 281 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKALDS-----FYVVEREGQIIACA 332
T+ V +++++ P E R E L + D ++ + I
Sbjct: 11 TTSDVQHYKFMEELLVESFPPEE-----YRELEHLREYTDRIGNFHNNIIFDDDLPIGFI 65
Query: 333 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTAD 388
+ F ++ V +P R G G + L+++ + + + R +
Sbjct: 66 TYWDF--DEFYYVEHFATNPALRNGGYGKRTLEHLCEFLKRPIVLEVERPVEEMAKRRIN 123
Query: 389 WFKSRGFREC 398
+++ GF
Sbjct: 124 FYQRHGFTLW 133
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 Length = 170 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 8e-08
Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 29/168 (17%)
Query: 281 RTAKVTDLSGIKQII-QPLVESGAL----------VRRTDEELLKALDSFYVVEREGQII 329
+ + + + + E L VR ++++ +V +G +I
Sbjct: 11 KPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVI 70
Query: 330 ACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---- 383
+ + +G+ P R +G G +L+ A GL + L
Sbjct: 71 GWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADN 130
Query: 384 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY----MKKLLPD 427
R ++ GF E R R +S + Y M + +
Sbjct: 131 ARAIALYEKIGFA--------HEGRARDAVSIDGHYIDSLNMAIIFGN 170
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 9e-08
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 22/138 (15%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVEREGQII 329
R A V DLSGI +I V + V E + V +G++
Sbjct: 8 RDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVA 67
Query: 330 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT 384
A+ + + G E + + V + RG G G +L+ + A + +L
Sbjct: 68 GYASYGDW-RAFDGYRHTREHS-VYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIE 125
Query: 385 RTAD----WFKSRGFREC 398
+S GFR
Sbjct: 126 AENTASIRLHESLGFRVV 143
|
| >1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1 Length = 199 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 1e-07
Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 52/192 (27%)
Query: 281 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKAL-------------DSFYVVER 324
R+A D I +++ +E L ++E+++ L V E
Sbjct: 5 RSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEH 64
Query: 325 EGQIIACAALFPFFKEKC------------------------------GEVAAIGVSPEC 354
G++ A +P EK + I V
Sbjct: 65 AGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERF 124
Query: 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 410
RG G G KLLD + + A + G L L + S+GF++ + I
Sbjct: 125 RGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTISGHLYNH 184
Query: 411 I--NLSRNSKYY 420
+ + S ++
Sbjct: 185 MQKEVEGGSHHH 196
|
| >4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A* Length = 165 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 2e-07
Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 17/158 (10%)
Query: 262 LFKRDGMGTMVASDLYEG--TRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDS 318
+F + + S+L + R D S G ++ L G L + E+ +A+ +
Sbjct: 4 IFDASVLAPHIPSNLPDNFKVRPLAKDDFSKGYVDLLSQLTSVGNLDQEAFEKRFEAMRT 63
Query: 319 ------FYVVE--REGQIIACAALF--PFFKEKCGEVAAI---GVSPECRGQGQGDKLLD 365
V+E +++A A+L F G + V E R Q G LL
Sbjct: 64 SVPNYHIVVIEDSNSQKVVASASLVVEMKFIHGAGSRGRVEDVVVDTEMRRQKLGAVLLK 123
Query: 366 YIEKKAASLGLDMLFLLTTRTADWF-KSRGFRECSIEM 402
+ SLG+ + L F GF++ M
Sbjct: 124 TLVSLGKSLGVYKISLECVPELLPFYSQFGFQDDCNFM 161
|
| >3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228} Length = 169 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 2e-07
Identities = 18/165 (10%), Positives = 51/165 (30%), Gaps = 20/165 (12%)
Query: 281 RTAKVTDLSGIKQII-QPLVESGALVRRTDEELLKALDSF----------YVVEREGQII 329
R DL +++ + + L + + + +++
Sbjct: 8 RLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELV 67
Query: 330 ACAALFPFFKEKCGEVAAI-GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL--LTTRT 386
A L A + + + +L+++I + A ++ L + +
Sbjct: 68 ATCTLKQMNYVGKCHKAILENNFVKNNDEIVNRELINHIIQYAKEQNIETLMIAIASNNI 127
Query: 387 A--DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTS 429
+ +F S GF + E+ +I + ++ ++S
Sbjct: 128 SAKVFFSSIGFENLAF----EKNASKIGNEYFDENWLIYSTTESS 168
|
| >1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1 Length = 180 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 3e-07
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 310 EELLKALDSFYVVEREGQIIACAALFP------FFKEKCGEVAAIGVSPECRGQGQGDKL 363
+EL F+ + + +I + + E+ I + + G G L
Sbjct: 52 KELSNMSSQFFFIYFDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHL 111
Query: 364 LDYIEKKAASLGLDMLFL 381
L+ + A ++L
Sbjct: 112 LNKAIEIALERNKKNIWL 129
|
| >3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A* Length = 183 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 4e-07
Identities = 18/122 (14%), Positives = 37/122 (30%), Gaps = 23/122 (18%)
Query: 281 RTAKVTDLSGIKQI-----------------IQPLVESGALVRRTDEELLKALDS----F 319
R + DL + ++ I+ + + E++++ + F
Sbjct: 30 RKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILF 89
Query: 320 YVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 379
+ +I L E+ + + PE + G LL EK G+
Sbjct: 90 LGAFADSTLIGFIELKI--IANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILEC 147
Query: 380 FL 381
L
Sbjct: 148 RL 149
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 Length = 175 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 5e-07
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDSF------YVVERE-GQII 329
R A+ DL + I + S T E+ ++ YV E E G +
Sbjct: 6 RLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVA 65
Query: 330 ACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376
A + F + EV+ I + CRG+G G LL + A +LG+
Sbjct: 66 AWISFETF-YGRPAYNKTAEVS-IYIDEACRGKGVGSYLLQEALRIAPNLGI 115
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} Length = 143 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-07
Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 12/125 (9%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
A + DL I I ++ + + RR + +V+ + I F +
Sbjct: 6 TKASIDDLDSIVHIDIDVIGNDS--RRNYIKHSIDEGRCVIVKEDNSISGFLTYDTNFFD 63
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-----WFKSRGF 395
C ++ I VSP R +G LL Y+ + + + +T ++ F + GF
Sbjct: 64 -CTFLSLIIVSPTKRRRGYASSLLSYMLSHSPTQKI----FSSTNESNESMQKVFNANGF 118
Query: 396 RECSI 400
I
Sbjct: 119 IRSGI 123
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} Length = 172 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 7e-07
Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 33/171 (19%)
Query: 281 RTAKVTDLSGIKQII-QPLVESGALVR------RTDEELLKALDS--------FYVVERE 325
R A+ D + + + + +E+ T EE+ L+ +
Sbjct: 8 REAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLN 67
Query: 326 GQIIACAALFPFFKEKCGEVA--AIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLL 382
G+I + +++ + I + G G LL+ + A AS L L L
Sbjct: 68 GKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLT 127
Query: 383 T----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY----MKKLL 425
++ GF E ++R K+ M KL+
Sbjct: 128 VQTRNQAAVHLYQKHGFVI-------EGSQERGAYIEEGKFIDVYLMGKLI 171
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} Length = 160 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 8e-07
Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 23/151 (15%)
Query: 281 RTAKVTDLSGIKQIIQPLVESG------ALVRRTDEELLKALDS----FYVVEREGQIIA 330
R A D I Q+ L + L R T+E+ K + ++ E +G+++
Sbjct: 8 RKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVG 67
Query: 331 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 386
A+L GE + + V R G G L+ + ++A GL + T T
Sbjct: 68 EASLHK-----DGEFS-LVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPM 121
Query: 387 ADWFKSRGFRECSIEMIPEERRKRINLSRNS 417
+ GF+ + +E + L+
Sbjct: 122 IKIGRKLGFK---MRFYEDEVYGEMRLTERE 149
|
| >2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1 Length = 153 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 8e-07
Identities = 19/116 (16%), Positives = 40/116 (34%), Gaps = 13/116 (11%)
Query: 281 RTAKVTDLSGIKQIIQPLV---ESGALVRRTDEELLKALDS------FYVVEREGQIIAC 331
A + L + + + + + L K L + + E +++
Sbjct: 4 VQATLEHLDLLAPLFVKYREFYGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGF 63
Query: 332 AALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 383
L+P F ++ + I V+ E R Q D LL + ++ A + + T
Sbjct: 64 CQLYPSFSSLSLKRVWILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVST 119
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 Length = 164 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 9e-07
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 318 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
S V+ + ++ PF K + E+ +S + +G G L+++++ + +
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTS-N 107
Query: 378 MLFLLT---TRTADWFKSRGFRECSIEMIPEERRKRI 411
+ + LT +FK +GF + I + I
Sbjct: 108 IKYFLTYADNYAIGYFKKQGFTK-EITLDKSIWMGYI 143
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 Length = 159 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 2e-06
Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 306 RRTDEELLKALDSFYVVEREGQIIACAALFP-----FFKEKCGEVAAIGVSPECRGQGQG 360
KA D F+V + +I+ + G + V + +G+G G
Sbjct: 44 NYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIG 103
Query: 361 DKLLDYIEKKAASLG 375
KLL
Sbjct: 104 RKLLITCLDFLGKYN 118
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 2e-06
Identities = 54/412 (13%), Positives = 97/412 (23%), Gaps = 154/412 (37%)
Query: 97 LNCNTYEVATACALA-IEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIA 155
+C + L+ E D II + F TL + Q+ + +
Sbjct: 33 FDCKDVQDMPKSILSKEEIDH---IIMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLR 88
Query: 156 ANY---VKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 212
NY + + E S + + E+R +N+ F N
Sbjct: 89 INYKFLMSPIKTEQRQ------------PSMMTRMYIEQRDRLYNDNQVFAKYN------ 130
Query: 213 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 272
+ + +L L EL A V + G+
Sbjct: 131 ----VSRLQPYLKLRQALLELRPAKNVL------ID------------------GVL--- 159
Query: 273 ASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS--FYV----VEREG 326
G SG K + V ++ +D F++
Sbjct: 160 ------G---------SG-KTW---VA---LDVCL-SYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 327 QIIA-----CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML-- 379
++ + P + + + + R +L ++ K L +L
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRS----DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252
Query: 380 ---------F------LLTTRTADWF---------------KSRGFRE------------ 397
F LLTTR S
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312
Query: 398 CSIEMIPEE-------------RRKRINLSR--NSKYYMKKLLPDTSGIIVD 434
C + +P E R L+ N K+ L ++
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
|
| >2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A Length = 172 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-06
Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 23/139 (16%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDSF------YVV--EREGQI 328
R A V DL GI I V + D+ +V + G++
Sbjct: 6 RDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEV 65
Query: 329 IACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML---- 379
+ A+ + + G E + + V + RG+G G +LL + ++A + GL ++
Sbjct: 66 LGYASYGDW-RPFEGFRGTVEHS-VYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAI 123
Query: 380 FLLTTRTADWFKSRGFREC 398
+ + GF
Sbjct: 124 ESGNAASIGLHRRLGFEIS 142
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} Length = 197 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 3e-06
Identities = 12/102 (11%), Positives = 31/102 (30%), Gaps = 12/102 (11%)
Query: 281 RTAKVTDLSGIKQII-QPLVESGALVRRTDEELLKALDS------FYVVEREGQIIACAA 333
++D+ + ++ + E V + + F V + + +I+
Sbjct: 38 SPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLD 97
Query: 334 LFPFFKEK----CGEVAAIGVSPECRGQGQGDKLLDYIEKKA 371
+ I V+ + R +G G L+ +
Sbjct: 98 YSSLYPFPSGQHIVTFG-IAVAEKERRKGIGRALVQIFLNEV 138
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} Length = 160 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 3e-06
Identities = 16/133 (12%), Positives = 45/133 (33%), Gaps = 18/133 (13%)
Query: 281 RTAKVTDLSGIKQIIQ-----------PLVESGALVRRTDEELLKALDSFYVVEREGQII 329
D + ++ L +VR + +++ + +
Sbjct: 15 APVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPV 74
Query: 330 ACAALFPFFKE-KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----T 384
+ E + ++ + + + +G+G G + L+ A G+ L+ +
Sbjct: 75 GYLDAKLGYPEAEDATLSLLLIREDHQGRGLGRQALERFA--AGLDGVRRLYAVVYGHNP 132
Query: 385 RTADWFKSRGFRE 397
+ +F+++GFR
Sbjct: 133 KAKAFFQAQGFRY 145
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} Length = 168 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-06
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 19/116 (16%)
Query: 281 RTAKVTDLSGIKQIIQ-PLVES---GALVRRTDEELLKALDSFYVVEREGQII------- 329
R A++ D+ I +I + L E+ V E L + +F+V + ++
Sbjct: 16 RNARMDDIDQIIKINRLTLPENYPYYFFV----EHLKEYGLAFFVAIVDNSVVGYIMPRI 71
Query: 330 ---ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFL 381
+ G V +I V E R +G LL+ K + + ++L
Sbjct: 72 EWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYL 127
|
| >1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A* Length = 181 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 4e-06
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 8/124 (6%)
Query: 281 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDSFYVV-EREGQIIACAALFPFF 338
R DL +Q I+ +V T+ + L + + G IIA AA+
Sbjct: 9 RLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRR 68
Query: 339 ------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 392
+CG V + V + RGQ LLD +E+ + R + S
Sbjct: 69 LIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYAS 128
Query: 393 RGFR 396
RG+
Sbjct: 129 RGWL 132
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* Length = 339 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 5e-06
Identities = 14/93 (15%), Positives = 25/93 (26%)
Query: 297 PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRG 356
+ +V +VV G+++ L V + V P R
Sbjct: 39 APPCNVDMVGSLRFAPPATALDDWVVRSGGRVVGALRLALPDGAPTARVDQLLVHPGRRR 98
Query: 357 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW 389
+G G L + + A L +
Sbjct: 99 RGIGRALWAHARELARKHDRTTLTATVVESLPS 131
|
| >1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5 Length = 312 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 6e-06
Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 20/113 (17%)
Query: 310 EELLKALDSFYVVERE-GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIE 368
+ L++ S + + G++IA F + + V P+ +G G L +
Sbjct: 203 QALVRFNKSLGICRSDTGELIAWIFQNDF-----SGLGMLQVLPKAERRGLGGLLAAAMS 257
Query: 369 KKAASLGLDMLFLLTTRTADW-------FKSRGFRECS----IEMIPEERRKR 410
++ A L K G+++ I+++P +
Sbjct: 258 REIARGEEITLTAWIV---ATNWRSEALLKRIGYQKDLVNEWIKLVPNSSLEH 307
|
| >2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi} Length = 182 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 6e-06
Identities = 16/113 (14%), Positives = 37/113 (32%), Gaps = 19/113 (16%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKALDS-------FYVVERE-GQI 328
+ I +I+ + + R+ E + + E GQ+
Sbjct: 14 ECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQL 73
Query: 329 IACAALFPFFKEKCG-----EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376
+ A+ F + E + + + + RG G L++ + K+A +
Sbjct: 74 LGFASWGSF-RAFPAYKYTVEHS-VYIHKDYRGLGLSKHLMNELIKRAVESEV 124
|
| >2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A* Length = 174 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 8e-06
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 23/124 (18%)
Query: 281 RTAKVTDLSGIKQII--------QPLVESGAL----VRRTDEELLKALDS-------FYV 321
R A + DL G+ +++ + +V L E + L + F
Sbjct: 4 RRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVA 63
Query: 322 VEREGQIIACAALFPFFKEKC----GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
G+++ AA P E+ AI V P + +G G L + + G
Sbjct: 64 ESESGEVVGFAAFGPDRASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYG 123
Query: 378 MLFL 381
+ +
Sbjct: 124 RMLV 127
|
| >1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1 Length = 140 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-05
Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 9/84 (10%)
Query: 320 YVVEREGQIIACAALFPFFKEKCGEVAAIG---VSPECRGQGQGDKLLDYIEKKAASLGL 376
VV + + + V R G G ++ +EK AA G
Sbjct: 45 IVVYDGEKPVGAGRWRMK-----DGYGKLERICVLKSHRSAGVGGIIMKALEKAAADGGA 99
Query: 377 DMLFLLT-TRTADWFKSRGFRECS 399
L T+ ++K G+R S
Sbjct: 100 SGFILNAQTQAVPFYKKHGYRVLS 123
|
| >1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E* Length = 207 | Back alignment and structure |
|---|
Score = 44.6 bits (105), Expect = 2e-05
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 21/138 (15%)
Query: 281 RTAKVTDLSGIKQIIQ-PLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALF 335
R D +G+ +I + + +E+ L + EG+++A
Sbjct: 38 RCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGS 97
Query: 336 PFFKE--------------KCGEVAAIGVSPECRGQGQGDKLLD-YIEKKAASLGLDMLF 380
+ +E + A+ V R QG+G LL Y+ A +
Sbjct: 98 LWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAV 157
Query: 381 LLTTRTA-DWFKSRGFRE 397
L+ +++ GF
Sbjct: 158 LMCEDALVPFYQRFGFHP 175
|
| >1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A Length = 166 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-05
Identities = 23/139 (16%), Positives = 42/139 (30%), Gaps = 21/139 (15%)
Query: 281 RTAKVTDLSGIKQI-----IQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALF 335
R D +G+ +I I + L + EG+++A
Sbjct: 9 RCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGS 68
Query: 336 PFFKE--------------KCGEVAAIGVSPECRGQGQGDKLLD-YIEKKAASLGLDMLF 380
+ +E + A+ V R QG+G LL Y+ A +
Sbjct: 69 LWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAV 128
Query: 381 LLTTRTA-DWFKSRGFREC 398
L+ +++ GF
Sbjct: 129 LMCEDALVPFYQRFGFHPA 147
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} Length = 276 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 3e-05
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
+ A L+ + + L + +G+++A F +
Sbjct: 144 QIAGTEQLTAFVTFAAANIGAPEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQY 203
Query: 341 KCGEVAAIG--VSPECRGQGQGDKLLDYIEKKAASLGL 376
+ E A +G V+ RGQG K+L ++ K AA+ GL
Sbjct: 204 Q-TEYADLGMIVAQSNRGQGIAKKVLTFLTKHAATQGL 240
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} Length = 163 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 4e-05
Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 281 RTAKVTDLSGIKQII--------QPLVESGAL-----VRRTDEELLKALDS--FYVVERE 325
R A +D I+ + Q L+ S E L + + F V+E+
Sbjct: 9 RKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQA 68
Query: 326 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 381
++I A ++ E+AA + PE +G G +LL+ +F+
Sbjct: 69 DKVIGFANFIEL-EKGKSELAAFYLLPEVTQRGLGTELLEVGMTLFH--VPLPMFV 121
|
| >2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V} Length = 201 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 7e-05
Identities = 17/155 (10%), Positives = 38/155 (24%), Gaps = 28/155 (18%)
Query: 281 RTAKVTDLSGIKQIIQPLVE----------SGALVRRTDEELLKALD--SFYVVEREGQI 328
R A ++ I +I+ +++ + +V +G +
Sbjct: 23 RLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGML 82
Query: 329 IACAALFPFF---------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS 373
AA+ + I +S + RG+G L + +
Sbjct: 83 ATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKG 142
Query: 374 LGL-DMLFLLTTRTADWFKSRGFRECSIEMIPEER 407
G++ C + R
Sbjct: 143 PDFRCDTHEKNVTMQHILNKLGYQYCGKVPLDGVR 177
|
| >3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1} Length = 147 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 8e-05
Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 8/95 (8%)
Query: 309 DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIG---VSPECRGQGQGDKLLD 365
D + + + + I L P + V G RG G G +LL
Sbjct: 39 DVKDTDQCEYAVLYLQPDLPITTLRLEP----QADHVMRFGRVCTRKAYRGHGWGRQLLT 94
Query: 366 YIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399
E+ A G + +++ G+R +
Sbjct: 95 AAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTA 129
|
| >2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli} Length = 147 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 8e-05
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 6/75 (8%)
Query: 305 VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLL 364
+ L + V Q + L + A+ + P+ RG G G L+
Sbjct: 39 LEDLVRSFLPEAPLWVAVNERDQPVGFMLL------SGQHMDALFIDPDVRGCGVGRVLV 92
Query: 365 DYIEKKAASLGLDML 379
++ A L ++
Sbjct: 93 EHALSMAPELTTNVN 107
|
| >3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822} Length = 189 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 9e-05
Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 11/114 (9%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKA---LDSFYVVERE-GQIIACAALF 335
R + D + I Q++ E L + LL + V E G+I + +
Sbjct: 30 RPPRRNDGAAIHQLVS---ECPPLDLNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAY 86
Query: 336 -PFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD 388
+ V + V RG G +L +I ++ + L TT D
Sbjct: 87 LLPTRPDVLFVWQVAVHSRARGHRLGRAMLGHILERQECRHVR--HLETTVGPD 138
|
| >3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp} Length = 188 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 1e-04
Identities = 23/156 (14%), Positives = 48/156 (30%), Gaps = 28/156 (17%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRT-------DEELLK---ALDSFYVVEREGQIIA 330
R K++DL I +++ E E + A D YV+E +I
Sbjct: 22 RLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYG 81
Query: 331 CAALFPF------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378
+ +E + + S +G +L +Y+ + G ++
Sbjct: 82 FIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSK--EYKGAATELFNYVIDVVKARGAEV 139
Query: 379 LFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 410
+ T F GF + +++ +
Sbjct: 140 ILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDK 175
|
| >3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis} Length = 422 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 3e-04
Identities = 15/129 (11%), Positives = 36/129 (27%), Gaps = 11/129 (8%)
Query: 281 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 337
T D + I + + +E + + E + + +
Sbjct: 28 HTITDDDWTRIALLARFAFGDIEPEQTQAAWRSMVPEDATVVVPDETDDAFVGQSLYLDM 87
Query: 338 F-------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWF 390
++ + V+P R +G + + + A G L +LT +
Sbjct: 88 QLTVPGGEVLPVAGISFVAVAPTHRRRGVLRAMYTELHDRIARAG-YPLAVLTASEGGIY 146
Query: 391 KSRGFRECS 399
G+ +
Sbjct: 147 GRFGYGVAT 155
|
| >3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} Length = 428 | Back alignment and structure |
|---|
Score = 42.0 bits (98), Expect = 3e-04
Identities = 12/99 (12%), Positives = 28/99 (28%), Gaps = 7/99 (7%)
Query: 296 QPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPF-------FKEKCGEVAAI 348
+ A RT A+ +++ A ++ +
Sbjct: 52 DFIGPESATAWRTLVPTDGAVVVRDGAGPGSEVVGMALYMDLRLTVPGEVVLPTAGLSFV 111
Query: 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 387
V+P R +G + + ++ A G + L +
Sbjct: 112 AVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHASEGG 150
|
| >2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A* Length = 224 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 4e-04
Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 22/123 (17%)
Query: 281 RTAKVTDLSGIKQIIQP-LVESGALVRRTDEELLKAL-DSFYVVEREGQIIACAALFPFF 338
R K+ DL + + E+ + + + +++E E +I+
Sbjct: 16 RHPKIEDLRDLIALETLCWSENLQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRID 75
Query: 339 KE-------------------KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDM 378
++ A+ + PE + QG GD+LL+++ + A + G++
Sbjct: 76 NPQLLDNKTCTQVPLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEK 135
Query: 379 LFL 381
+
Sbjct: 136 VVA 138
|
| >3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1} Length = 197 | Back alignment and structure |
|---|
Score = 40.3 bits (94), Expect = 4e-04
Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 28/108 (25%)
Query: 318 SFYVVEREGQIIACA--------------------ALFPFFKEKCGEVA------AIGVS 351
SF V+ + I A +F F +
Sbjct: 57 SFAFVDADDNIKAQILNIPYDAYENMHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIG 116
Query: 352 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT--RTADWFKSRGFRE 397
E G+G KLL ++++S G ++ T + + F+ GF
Sbjct: 117 SEVTGKGLATKLLKKTIEESSSHGFKYIYGDCTNIISQNMFEKHGFET 164
|
| >2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A* Length = 171 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 4e-04
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 24/140 (17%)
Query: 281 RTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL--------------DSFYVVE 323
R A D S I ++I+ L + V T+++LL+ +
Sbjct: 7 RPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTP 66
Query: 324 REGQIIACAALFPFFKEKCGE---VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 380
I+ A + + G+ + V + RG G G ++L + + A +
Sbjct: 67 EGHSIVGFAMYYFTYDPWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMH 126
Query: 381 LLT----TRTADWFKSRGFR 396
L + +++K RG
Sbjct: 127 FLVAEWNEPSINFYKRRGAS 146
|
| >2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A* Length = 170 | Back alignment and structure |
|---|
Score = 39.6 bits (92), Expect = 6e-04
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 24/140 (17%)
Query: 281 RTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL------DSFYVVEREG----- 326
R AK D I ++I+ L E V+ ++E L V E
Sbjct: 7 REAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKL 66
Query: 327 ---QIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLF 380
++ + + K + + I V PE RGQG G K++ + + A G
Sbjct: 67 LGPCVVGYGIYYFIYSTWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFR 126
Query: 381 LLT----TRTADWFKSRGFR 396
L R D +K+ G +
Sbjct: 127 LAVLDWNQRAMDLYKALGAQ 146
|
| >2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1 Length = 166 | Back alignment and structure |
|---|
Score = 38.9 bits (91), Expect = 8e-04
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 16/122 (13%)
Query: 281 RTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKALDS------FYVVEREGQIIAC 331
R A D I I L + + V E + ++L + + EG+ I
Sbjct: 14 RPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGY 73
Query: 332 AALFPFF---KEKCG-EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTA 387
A F + + G + + V+PE RG G G +LL + ++A + L
Sbjct: 74 AVFFYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWS---VL 130
Query: 388 DW 389
DW
Sbjct: 131 DW 132
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 438 | |||
| 3d2m_A | 456 | Putative acetylglutamate synthase; protein-COA-Glu | 100.0 | |
| 3s6g_A | 460 | N-acetylglutamate kinase / N-acetylglutamate SYNT; | 100.0 | |
| 3s6k_A | 467 | Acetylglutamate kinase; synthase, transferase; 2.8 | 100.0 | |
| 4ab7_A | 464 | Protein Arg5,6, mitochondrial; transferase, argini | 100.0 | |
| 2ap9_A | 299 | NAG kinase, acetylglutamate kinase, AGK; structura | 99.96 | |
| 3l86_A | 279 | Acetylglutamate kinase; ARGB, amino-acid biosynthe | 99.96 | |
| 2buf_A | 300 | Acetylglutamate kinase; acetyglutamate kinase, ADP | 99.96 | |
| 2rd5_A | 298 | Acetylglutamate kinase-like protein; protein-prote | 99.96 | |
| 2v5h_A | 321 | Acetylglutamate kinase; amino-acid biosynthesis, t | 99.96 | |
| 2bty_A | 282 | Acetylglutamate kinase; N-acetyl-L-glutamate kinas | 99.96 | |
| 2egx_A | 269 | Putative acetylglutamate kinase; struc genomics, N | 99.95 | |
| 3zzh_A | 307 | Acetylglutamate kinase; transferase, arginine bios | 99.95 | |
| 1gs5_A | 258 | Acetylglutamate kinase; carbamate kinase, amino ac | 99.94 | |
| 3ll9_A | 269 | Isopentenyl phosphate kinase; mevalonate biosynthe | 99.93 | |
| 3k4o_A | 266 | Isopentenyl phosphate kinase; small molecule kinas | 99.9 | |
| 2e9y_A | 316 | Carbamate kinase; transferase, structural genomics | 99.9 | |
| 3e0k_A | 150 | Amino-acid acetyltransferase; N-acetylglutamate sy | 99.89 | |
| 1e19_A | 314 | Carbamate kinase-like carbamoylphosphate synthetas | 99.88 | |
| 2we5_A | 310 | Carbamate kinase 1; arginine catabolism, arginine | 99.87 | |
| 3d40_A | 286 | FOMA protein; fosfomycin, antibiotic resistance, k | 99.84 | |
| 3ll5_A | 249 | Gamma-glutamyl kinase related protein; alternate m | 99.83 | |
| 3kzf_A | 317 | Carbamate kinase; arginine dihydrolase pathway, gi | 99.81 | |
| 2ako_A | 251 | Glutamate 5-kinase; structural genomics, PSI, prot | 99.8 | |
| 2j5v_A | 367 | Glutamate 5-kinase; proline biosynthesis, gamma gl | 99.77 | |
| 4axs_A | 332 | Carbamate kinase; oxidoreductase; 2.50A {Mycoplasm | 99.76 | |
| 4a7w_A | 240 | Uridylate kinase; transferase; HET: GTP; 1.80A {He | 99.75 | |
| 2j4j_A | 226 | Uridylate kinase; transferase, nucleoside monophos | 99.74 | |
| 3ab4_A | 421 | Aspartokinase; aspartate kinase, concerted inhibit | 99.74 | |
| 1tiq_A | 180 | Protease synthase and sporulation negative regulat | 99.72 | |
| 3kkw_A | 182 | Putative uncharacterized protein; acetyltransferas | 99.72 | |
| 3lod_A | 162 | Putative acyl-COA N-acyltransferase; structural ge | 99.72 | |
| 2x7b_A | 168 | N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulf | 99.72 | |
| 3d8p_A | 163 | Acetyltransferase of GNAT family; NP_373092.1, str | 99.71 | |
| 2fia_A | 162 | Acetyltransferase; structural genomics, PSI, prote | 99.71 | |
| 2ij9_A | 219 | Uridylate kinase; structural genomics, protein str | 99.7 | |
| 2pdo_A | 144 | Acetyltransferase YPEA; alpha-beta-alpha sandwich, | 99.7 | |
| 4h89_A | 173 | GCN5-related N-acetyltransferase; N-acyltransferas | 99.7 | |
| 1u6m_A | 199 | Acetyltransferase, GNAT family; structural genomic | 99.69 | |
| 2brx_A | 244 | Uridylate kinase; UMP kinase, amino acid kinase, p | 99.69 | |
| 2i6c_A | 160 | Putative acetyltransferase; GNAT family, structura | 99.69 | |
| 2dxq_A | 150 | AGR_C_4057P, acetyltransferase; structural genomic | 99.69 | |
| 3efa_A | 147 | Putative acetyltransferase; structural genom 2, pr | 99.69 | |
| 3fix_A | 183 | N-acetyltransferase; termoplasma acidophilum, stru | 99.69 | |
| 3ek6_A | 243 | Uridylate kinase; UMPK unique GTP B site, alloster | 99.69 | |
| 2q0y_A | 153 | GCN5-related N-acetyltransferase; YP_295895.1, ace | 99.68 | |
| 2q7b_A | 181 | Acetyltransferase, GNAT family; NP_689019.1, struc | 99.68 | |
| 3dr6_A | 174 | YNCA; acetyltransferase, csgid target, essential g | 99.68 | |
| 3c1m_A | 473 | Probable aspartokinase; allosteric inhibition, thr | 99.68 | |
| 4evy_A | 166 | Aminoglycoside N(6')-acetyltransferase type 1; cen | 99.68 | |
| 2ob0_A | 170 | Human MAK3 homolog; acetyltransferase, structural | 99.68 | |
| 1cjw_A | 166 | Protein (serotonin N-acetyltransferase); HET: COT; | 99.68 | |
| 4e0a_A | 164 | BH1408 protein; structural genomics, PSI-biology, | 99.67 | |
| 2cnt_A | 160 | Modification of 30S ribosomal subunit protein S18; | 99.67 | |
| 2ogx_B | 270 | Molybdenum storage protein subunit beta; open alph | 99.67 | |
| 3gy9_A | 150 | GCN5-related N-acetyltransferase; YP_001815201.1, | 99.67 | |
| 1mk4_A | 157 | Hypothetical protein YQJY; alpha-beta-alpha sandwi | 99.67 | |
| 2ge3_A | 170 | Probable acetyltransferase; structural GEN PSI, pr | 99.67 | |
| 2ae6_A | 166 | Acetyltransferase, GNAT family; GCN5-related N-ace | 99.67 | |
| 1vhs_A | 175 | Similar to phosphinothricin acetyltransferase; str | 99.67 | |
| 2fe7_A | 166 | Probable N-acetyltransferase; structural genomics, | 99.67 | |
| 2bei_A | 170 | Diamine acetyltransferase 2; SSAT2, BC011751, AAH1 | 99.66 | |
| 1z9d_A | 252 | Uridylate kinase, UK, UMP kinase; structural genom | 99.66 | |
| 3fnc_A | 163 | Protein LIN0611, putative acetyltransferase; GNAT, | 99.66 | |
| 3mgd_A | 157 | Predicted acetyltransferase; structural genomics, | 99.66 | |
| 1n71_A | 180 | AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, | 99.66 | |
| 2ogx_A | 276 | Molybdenum storage protein subunit alpha; open alp | 99.66 | |
| 3i9s_A | 183 | Integron cassette protein; oyster POND, woods HOLE | 99.65 | |
| 3i3g_A | 161 | N-acetyltransferase; malaria, structural genomics, | 99.65 | |
| 1z4e_A | 153 | Transcriptional regulator; nysgxrc target T2017, G | 99.65 | |
| 3dsb_A | 157 | Putative acetyltransferase; APC60368.2, ST genomic | 99.65 | |
| 3bln_A | 143 | Acetyltransferase GNAT family; NP_981174.1, struct | 99.64 | |
| 2j8m_A | 172 | Acetyltransferase PA4866 from P. aeruginosa; GCN5 | 99.64 | |
| 2i79_A | 172 | Acetyltransferase, GNAT family; acetyl coenzyme *A | 99.64 | |
| 3nwy_A | 281 | Uridylate kinase; allosterically activated form, A | 99.64 | |
| 2fiw_A | 172 | GCN5-related N-acetyltransferase:aminotransferase | 99.64 | |
| 2r7h_A | 177 | Putative D-alanine N-acetyltransferase of GNAT FA; | 99.64 | |
| 1ghe_A | 177 | Acetyltransferase; acyl coenzyme A complex; HET: A | 99.64 | |
| 1yr0_A | 175 | AGR_C_1654P, phosphinothricin acetyltransferase; s | 99.63 | |
| 1s3z_A | 165 | Aminoglycoside 6'-N-acetyltransferase; GNAT, amino | 99.63 | |
| 1ybd_A | 239 | Uridylate kinase; alpha/beta/alpha fold, hexamer, | 99.63 | |
| 3t9y_A | 150 | Acetyltransferase, GNAT family; PSI-biology, struc | 99.62 | |
| 2va1_A | 256 | Uridylate kinase; UMPK, transferase, pyrimidine bi | 99.62 | |
| 4fd4_A | 217 | Arylalkylamine N-acetyltransferase like 5B; GNAT; | 99.62 | |
| 1kux_A | 207 | Aralkylamine, serotonin N-acetyltransferase; enzym | 99.62 | |
| 2ozh_A | 142 | Hypothetical protein XCC2953; structural genomics, | 99.62 | |
| 2oh1_A | 179 | Acetyltransferase, GNAT family; YP_013287.1, struc | 99.62 | |
| 2jdc_A | 146 | Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1. | 99.62 | |
| 1y7r_A | 133 | Hypothetical protein SA2161; structural genomics, | 99.62 | |
| 1y9w_A | 140 | Acetyltransferase; structural genomics, Pro struct | 99.62 | |
| 1wwz_A | 159 | Hypothetical protein PH1933; structural genomics, | 99.61 | |
| 2eui_A | 153 | Probable acetyltransferase; dimer, structural geno | 99.61 | |
| 1qsm_A | 152 | HPA2 histone acetyltransferase; protein-acetyl coe | 99.61 | |
| 1vkc_A | 158 | Putative acetyl transferase; structural genomics, | 99.61 | |
| 3fyn_A | 176 | Integron gene cassette protein HFX_CASS3; integron | 99.61 | |
| 3owc_A | 188 | Probable acetyltransferase; structural genomics, P | 99.61 | |
| 2atr_A | 138 | Acetyltransferase, GNAT family; MCSG, structural g | 99.61 | |
| 3t90_A | 149 | Glucose-6-phosphate acetyltransferase 1; GNAT fold | 99.61 | |
| 2jlm_A | 182 | Putative phosphinothricin N-acetyltransferase; met | 99.61 | |
| 1y9k_A | 157 | IAA acetyltransferase; structural genomics, midwes | 99.6 | |
| 1q2y_A | 140 | Protein YJCF, similar to hypothetical proteins; GC | 99.6 | |
| 3ld2_A | 197 | SMU.2055, putative acetyltransferase; HET: COA; 2. | 99.6 | |
| 3fbu_A | 168 | Acetyltransferase, GNAT family; structur genomics, | 99.6 | |
| 2a1f_A | 247 | Uridylate kinase; PYRH, structural genomics, PSI, | 99.6 | |
| 3g8w_A | 169 | Lactococcal prophage PS3 protein 05; APC61042, ace | 99.59 | |
| 2cy2_A | 174 | TTHA1209, probable acetyltransferase; structural g | 99.59 | |
| 2pc1_A | 201 | Acetyltransferase, GNAT family; NP_688560.1, struc | 99.59 | |
| 1on0_A | 158 | YYCN protein; structural genomics, alpha-beta prot | 99.59 | |
| 2r1i_A | 172 | GCN5-related N-acetyltransferase; YP_831484.1, put | 99.59 | |
| 4ag7_A | 165 | Glucosamine-6-phosphate N-acetyltransferase; HET: | 99.59 | |
| 1yx0_A | 159 | Hypothetical protein YSNE; NESG, GFT structral gen | 99.59 | |
| 3exn_A | 160 | Probable acetyltransferase; GCN5-related N-acetylt | 99.58 | |
| 1xeb_A | 150 | Hypothetical protein PA0115; midwest center for st | 99.58 | |
| 1i12_A | 160 | Glucosamine-phosphate N-acetyltransferase; GNAT, a | 99.58 | |
| 1ufh_A | 180 | YYCN protein; alpha and beta, fold, acetyltransfer | 99.58 | |
| 2b5g_A | 171 | Diamine acetyltransferase 1; structural genomics, | 99.58 | |
| 2aj6_A | 159 | Hypothetical protein MW0638; structural genomics, | 99.57 | |
| 2ree_A | 224 | CURA; GNAT, S-acetyltransferase, decarboxylase, po | 99.57 | |
| 3f8k_A | 160 | Protein acetyltransferase; GCN5-related N-acetyltr | 99.57 | |
| 3jvn_A | 166 | Acetyltransferase; alpha-beta protein, structural | 99.56 | |
| 2bue_A | 202 | AAC(6')-IB; GNAT, transferase, aminoglycoside, flu | 99.55 | |
| 1bo4_A | 168 | Protein (serratia marcescens aminoglycoside-3-N- a | 99.55 | |
| 3igr_A | 184 | Ribosomal-protein-S5-alanine N-acetyltransferase; | 99.55 | |
| 2o28_A | 184 | Glucosamine 6-phosphate N-acetyltransferase; struc | 99.55 | |
| 3ec4_A | 228 | Putative acetyltransferase from the GNAT family; Y | 99.55 | |
| 2vi7_A | 177 | Acetyltransferase PA1377; GNAT, GCN5 family, N-ace | 99.55 | |
| 3f5b_A | 182 | Aminoglycoside N(6')acetyltransferase; APC60744, l | 99.55 | |
| 3pp9_A | 187 | Putative streptothricin acetyltransferase; toxin p | 99.55 | |
| 2fl4_A | 149 | Spermine/spermidine acetyltransferase; structural | 99.55 | |
| 2jjx_A | 255 | Uridylate kinase, UMP kinase; structural genomics, | 99.54 | |
| 3tth_A | 170 | Spermidine N1-acetyltransferase; central intermedi | 99.54 | |
| 1z4r_A | 168 | General control of amino acid synthesis protein 5- | 99.54 | |
| 1s7k_A | 182 | Acetyl transferase; GNAT; 1.80A {Salmonella typhim | 99.54 | |
| 3eg7_A | 176 | Spermidine N1-acetyltransferase; structural genomi | 99.53 | |
| 2g3a_A | 152 | Acetyltransferase; structural genomics, PSI, prote | 99.53 | |
| 3h4q_A | 188 | Putative acetyltransferase; NP_371943.1, structura | 99.53 | |
| 4fd5_A | 222 | Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A | 99.53 | |
| 3juw_A | 175 | Probable GNAT-family acetyltransferase; structural | 99.52 | |
| 3eo4_A | 164 | Uncharacterized protein MJ1062; APC60792.2,MJ_1062 | 99.52 | |
| 2qec_A | 204 | Histone acetyltransferase HPA2 and related acetylt | 99.52 | |
| 1nsl_A | 184 | Probable acetyltransferase; structural genomics, h | 99.52 | |
| 1qst_A | 160 | TGCN5 histone acetyl transferase; GCN5-related N-a | 99.52 | |
| 2fsr_A | 195 | Acetyltransferase; alpha-beta-sandwich, structural | 99.52 | |
| 3l76_A | 600 | Aspartokinase; allostery, ACT domains, kinase tran | 99.52 | |
| 2vez_A | 190 | Putative glucosamine 6-phosphate acetyltransferase | 99.51 | |
| 3r9f_A | 188 | MCCE protein; microcin C7, acetyltransferase, SELF | 99.51 | |
| 3d3s_A | 189 | L-2,4-diaminobutyric acid acetyltransferase; alpha | 99.51 | |
| 3ey5_A | 181 | Acetyltransferase-like, GNAT family; structural ge | 99.5 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 99.49 | |
| 3qb8_A | 197 | A654L protein; GNAT N-acetyltransferase, acetyltra | 99.49 | |
| 1yre_A | 197 | Hypothetical protein PA3270; APC5563, midwest cent | 99.49 | |
| 3te4_A | 215 | GH12636P, dopamine N acetyltransferase, isoform A; | 99.49 | |
| 2kcw_A | 147 | Uncharacterized acetyltransferase YJAB; GNAT fold, | 99.49 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 99.49 | |
| 3pzj_A | 209 | Probable acetyltransferases; MCSG, PSI-2, structur | 99.48 | |
| 2cdq_A | 510 | Aspartokinase; aspartate kinase, amino acid metabo | 99.47 | |
| 2fck_A | 181 | Ribosomal-protein-serine acetyltransferase, putat; | 99.47 | |
| 2d4p_A | 141 | Hypothetical protein TTHA1254; structural genomics | 99.47 | |
| 1ygh_A | 164 | ADA4, protein (transcriptional activator GCN5); tr | 99.47 | |
| 2j0w_A | 449 | Lysine-sensitive aspartokinase 3; feedback inhibit | 99.46 | |
| 2z10_A | 194 | Ribosomal-protein-alanine acetyltransferase; alpha | 99.45 | |
| 1m4i_A | 181 | Aminoglycoside 2'-N-acetyltransferase; COA binding | 99.45 | |
| 1yk3_A | 210 | Hypothetical protein RV1347C/MT1389; acyltransfera | 99.45 | |
| 2qml_A | 198 | BH2621 protein; structural genomics, joint center | 99.43 | |
| 2vzy_A | 218 | RV0802C; transferase, GCN5-related N-acetyltransfe | 99.42 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 99.41 | |
| 2k5t_A | 128 | Uncharacterized protein YHHK; N-acetyl transferase | 99.41 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 99.4 | |
| 2g0b_A | 198 | FEEM; N-acyl transferase, environmental DNA, prote | 99.4 | |
| 3tcv_A | 246 | GCN5-related N-acetyltransferase; GRAM negative co | 99.4 | |
| 4fd7_A | 238 | Putative arylalkylamine N-acetyltransferase 7; GNA | 99.4 | |
| 2gan_A | 190 | 182AA long hypothetical protein; alpha-beta protei | 99.39 | |
| 3c26_A | 266 | Putative acetyltransferase TA0821; NP_394282.1, A | 99.38 | |
| 3s6f_A | 145 | Hypothetical acetyltransferase; acyl-COA N-acyltra | 99.38 | |
| 3n7z_A | 388 | Acetyltransferase, GNAT family; PSI2, MCSG, struct | 99.38 | |
| 1yvk_A | 163 | Hypothetical protein BSU33890; ALPHS-beta protein, | 99.38 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 99.38 | |
| 2i00_A | 406 | Acetyltransferase, GNAT family; structural genomic | 99.37 | |
| 2hv2_A | 400 | Hypothetical protein; PSI, protein structure initi | 99.36 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 99.36 | |
| 3frm_A | 254 | Uncharacterized conserved protein; APC61048, staph | 99.34 | |
| 4ava_A | 333 | Lysine acetyltransferase; allosteric regulation, d | 99.33 | |
| 3r1k_A | 428 | Enhanced intracellular surviVal protein; GNAT, ace | 99.32 | |
| 3tt2_A | 330 | GCN5-related N-acetyltransferase; structural genom | 99.31 | |
| 3sxn_A | 422 | Enhanced intracellular surviVal protein; GNAT fold | 99.27 | |
| 2pr1_A | 163 | Uncharacterized N-acetyltransferase YLBP; YIBP pro | 99.23 | |
| 2wpx_A | 339 | ORF14; transferase, acetyl transferase, antibiotic | 99.22 | |
| 3g3s_A | 249 | GCN5-related N-acetyltransferase; ZP_00874857.1, a | 99.21 | |
| 2zw5_A | 301 | Bleomycin acetyltransferase; dimer, two domains; H | 99.21 | |
| 2q04_A | 211 | Acetoin utilization protein; ZP_00540088.1, struct | 99.18 | |
| 1r57_A | 102 | Conserved hypothetical protein; GCN5, N-acetyltran | 99.15 | |
| 3tvi_A | 446 | Aspartokinase; structural genomics, ACT domains, r | 99.14 | |
| 2ft0_A | 235 | TDP-fucosamine acetyltransferase; GNAT fold acetyl | 99.08 | |
| 1sqh_A | 312 | Hypothetical protein CG14615-PA; structural genomi | 99.08 | |
| 1p0h_A | 318 | Hypothetical protein RV0819; GNAT fold, acetyltran | 99.01 | |
| 1ro5_A | 201 | Autoinducer synthesis protein LASI; alpha-beta-alp | 98.88 | |
| 2zpa_A | 671 | Uncharacterized protein YPFI; RNA modification enz | 98.86 | |
| 3p2h_A | 201 | AHL synthase; acyl-ACP binding, SAM binding, signa | 98.62 | |
| 3shp_A | 176 | Putative acetyltransferase STHE_0691; PSI-biology, | 98.61 | |
| 1xmt_A | 103 | Putative acetyltransferase; structural genomics, p | 98.61 | |
| 1yle_A | 342 | Arginine N-succinyltransferase, alpha chain; struc | 98.52 | |
| 1bob_A | 320 | HAT1, histone acetyltransferase; histone modificat | 98.42 | |
| 1kzf_A | 230 | Acyl-homoserinelactone synthase ESAI; alpha-beta, | 98.41 | |
| 3dns_A | 135 | Ribosomal-protein-alanine acetyltransferase; N-ter | 98.03 | |
| 2p0w_A | 324 | Histone acetyltransferase type B catalytic subuni; | 95.97 | |
| 4hkf_A | 191 | Alpha-tubulin N-acetyltransferase; tubulin acetylt | 95.76 | |
| 3iwg_A | 276 | Acetyltransferase, GNAT family; structural genomic | 95.58 | |
| 3ddd_A | 288 | Putative acetyltransferase; NP_142035.1, structura | 94.28 | |
| 3gkr_A | 336 | FEMX; FEMX, peptidoglycan, hexapeptide, transferas | 93.3 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 93.29 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 93.12 | |
| 4b14_A | 385 | Glycylpeptide N-tetradecanoyltransferase; malaria, | 92.26 | |
| 1iic_A | 422 | Peptide N-myristoyltransferase; HET: MYA; 2.20A {S | 91.86 | |
| 3to7_A | 276 | Histone acetyltransferase ESA1; MYST family; HET: | 91.84 | |
| 1iyk_A | 392 | Myristoyl-COA:protein N-myristoyltransferase; HET: | 91.77 | |
| 2ozu_A | 284 | Histone acetyltransferase MYST3; structural genomi | 91.52 | |
| 3iu1_A | 383 | Glycylpeptide N-tetradecanoyltransferase 1; N-myri | 91.4 | |
| 4b5o_A | 200 | Alpha-tubulin N-acetyltransferase; microtubules, c | 91.33 | |
| 2ou2_A | 280 | Histone acetyltransferase htatip; structural genom | 91.18 | |
| 4h6u_A | 200 | Alpha-tubulin N-acetyltransferase; tubulin acetylt | 90.49 | |
| 2pq8_A | 278 | Probable histone acetyltransferase MYST1; MOF, str | 90.19 | |
| 3iu1_A | 383 | Glycylpeptide N-tetradecanoyltransferase 1; N-myri | 90.11 | |
| 2wuu_A | 421 | N-myristoyltransferase; acyltransferase; HET: NHM; | 90.05 | |
| 1iyk_A | 392 | Myristoyl-COA:protein N-myristoyltransferase; HET: | 89.74 | |
| 4gs4_A | 240 | Alpha-tubulin N-acetyltransferase; acetyl coenzyme | 89.31 | |
| 1iic_A | 422 | Peptide N-myristoyltransferase; HET: MYA; 2.20A {S | 88.87 | |
| 1lrz_A | 426 | FEMA, factor essential for expression of methicill | 86.43 | |
| 2ozg_A | 396 | GCN5-related N-acetyltransferase; YP_325469.1, ace | 82.8 | |
| 1rxt_A | 496 | Myristoyl-, glycylpeptide N-tetradecanoyltransfera | 81.05 | |
| 1rxt_A | 496 | Myristoyl-, glycylpeptide N-tetradecanoyltransfera | 80.11 |
| >3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-54 Score=449.01 Aligned_cols=335 Identities=35% Similarity=0.595 Sum_probs=301.1
Q ss_pred ccchhhhhHhhhCCCCCcccccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceE
Q 013702 4 AGGIRMMIEAKLSPGPPICNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLV 83 (438)
Q Consensus 4 ~g~~~~~~~a~ls~~~~l~~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IP 83 (438)
+|++...+++.|+.++. ..+ +++++++.|++++++++.++.+++|+|++|+|+.+|++.|+.||++|.||
T Consensus 119 ~G~~~~~l~~~l~~g~~---------~~~-~~~~l~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~ip 188 (456)
T 3d2m_A 119 AGTVRSRFEAALCGSVS---------GFA-RAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRFQLDAGNIV 188 (456)
T ss_dssp HHHHHHHHHHHHHTC------------------CCCEECCSCEEEEECCEETTEECBTBEEEEEECHHHHHHHHHTTCEE
T ss_pred HhHHHHHHHHHHhcccc---------cCC-CccceeeccCcEEEEEEcccccCcccCceeeEEEECHHHHHHHHHCCCeE
Confidence 36666667776664443 122 46999999999999999887778899999999999999999999999999
Q ss_pred EEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhh
Q 013702 84 ILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAV 162 (438)
Q Consensus 84 Vi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~ 162 (438)
|++|++.+.+|+++|+|+|++|+++|.+|+||+|+|+|||+|+. .++++|++++.+|+++++..|.
T Consensus 189 Ii~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~lTdvdGv~~~~~~~i~~i~~~e~~~~~~~g~------------- 255 (456)
T 3d2m_A 189 WMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTLAETLSAQEAQSLAEHAA------------- 255 (456)
T ss_dssp EECSEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSSCBCTTSCBCSEEEHHHHHHHHTTCC-------------
T ss_pred EECCcccCCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCccccCCCCCccccCCHHHHHHHHhccC-------------
Confidence 99999999999999999999999999999999999999999885 5799999999999988864321
Q ss_pred hcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHc
Q 013702 163 AEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRR 242 (438)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (438)
| | |.+||++|..|++.
T Consensus 256 ------------------------------------------g-g---------------------m~~Kl~aa~~a~~~ 271 (456)
T 3d2m_A 256 ------------------------------------------S-E---------------------TRRLISSAVAALEG 271 (456)
T ss_dssp ------------------------------------------H-H---------------------HHHHHHHHHHHHHT
T ss_pred ------------------------------------------C-C---------------------hHHHHHHHHHHHHh
Confidence 1 3 99999999999999
Q ss_pred CCCeEEeeccccCceeeeehhhcCCCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEE
Q 013702 243 GVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVV 322 (438)
Q Consensus 243 gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~ 322 (438)
|++++||+|++.|++++.++|++++.||.|.++.++.||+++++|++.+.+++.......+..+++.+.+..++..++++
T Consensus 272 gv~~v~I~~~~~~~~ll~~l~~~~~~GT~i~~~~~~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~l~~~~va 351 (456)
T 3d2m_A 272 GVHRVQILNGAADGSLLQELFTRNGIGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSIL 351 (456)
T ss_dssp TCSEEEEEETTSTTHHHHHHHCSSCSSEEEECCCCCEEEECCGGGHHHHHHHHHHHHHHTSSCCCCHHHHHHHGGGEEEE
T ss_pred CCCEEEEecCcCCchHHHHHHhhcCCceeeecccceeeCCCCHHHHHHHHHHHHHHHhcCCCccCCHHHHHHHHhhEEEE
Confidence 99999999999999888999999999999999999999999999999999999988777777788999999988889999
Q ss_pred EECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEeceec
Q 013702 323 EREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 323 ~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~~ 402 (438)
+.++++|||+.+.+..+...++|..++|+|+|||+|||++|++++++++++.|++.+++.++.+.+||+|+||+..+...
T Consensus 352 ~~~g~iVG~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~N~~a~~fY~k~GF~~~~~~~ 431 (456)
T 3d2m_A 352 EHDGNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALSTNTGEWFAERGFQTASEDE 431 (456)
T ss_dssp EETTEEEEEEEEEECSSTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHTTTCEEECGGG
T ss_pred EECCEEEEEEEEEecCCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEcHHHHHHHHHCCCEEeCccc
Confidence 99999999999987656688999999999999999999999999999999999999999877899999999999999999
Q ss_pred cchHhhhhhcCC-CCceEEEEccC
Q 013702 403 IPEERRKRINLS-RNSKYYMKKLL 425 (438)
Q Consensus 403 lp~~~~~~y~~~-r~s~~~~k~ll 425 (438)
+|..++..|+++ +++++|+|++.
T Consensus 432 ~p~~~~~~y~~~~r~~~v~~k~L~ 455 (456)
T 3d2m_A 432 LPETRRKDYRSNGRNSHILVRRLH 455 (456)
T ss_dssp SCHHHHHHHHHHCCCCEEEEEECC
T ss_pred CCHHHHhhcccccCCeEEEEEEcC
Confidence 999999999999 99999999875
|
| >3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=329.01 Aligned_cols=279 Identities=20% Similarity=0.253 Sum_probs=229.9
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~ 95 (438)
++..|+ .|+++|.+ |++++| ++++|++ ++++|||++|+|++||++.|+.||++|.|||++|++.+.+|+
T Consensus 136 vn~~lv~aL~~~G~~----Av~lsg---~~~~a~~---~~~~d~g~~G~I~~v~~~~i~~lL~~g~IpVi~p~g~~~~G~ 205 (460)
T 3s6g_A 136 ANLALVDAIRDAGGR----AAAVPR---GVFEADI---VDADKLGRVGEPRHIHLDLVGSAARAGQAAILACLGETPDGT 205 (460)
T ss_dssp HHHHHHHHHHHTTCC----EEEECS---SSEEEEE---SCTTTTBSEEEEEEECCHHHHHHHHTTCEEEEECEEECTTCC
T ss_pred HHHHHHHHHHhCCCC----ceEEec---CeEEEEE---ecCcccCccCcceEEcHHHHHHHHHCCcEEEEECceECCCCc
Confidence 456676 78888876 999986 4558886 567899999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCHH-HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCC
Q 013702 96 VLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQ-EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 173 (438)
Q Consensus 96 ~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~~-e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (438)
.+|+|+|++|+++|.+|+||+|+|+|||+|+. +++++|++++.. |++.++.++.
T Consensus 206 ~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~~------------------------ 261 (460)
T 3s6g_A 206 LVNINADVAVRALVHALQPYKVVFLTGTGGLLDEDGDILSSINLATDFGDLMQADW------------------------ 261 (460)
T ss_dssp EEEECHHHHHHHHHHHHCCSEEEEECSSCSCBCTTSSBCCEEEHHHHHHHHHHCSS------------------------
T ss_pred EEecCHHHHHHHHHHHcCCCEEEEEeCCccccCCCCeecceeCcHHHHHHHHhcCC------------------------
Confidence 99999999999999999999999999999874 679999999996 8888865432
Q ss_pred CCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 013702 174 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 253 (438)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~ 253 (438)
+ +| | |.+||++|..+++ |++++|+++++
T Consensus 262 -----~------------------------tG-G---------------------M~~Kl~aa~~a~~-gv~~v~iv~g~ 289 (460)
T 3s6g_A 262 -----V------------------------NG-G---------------------MRLKLEEIKRLLD-DLPLSSSVSIT 289 (460)
T ss_dssp -----S------------------------CH-H---------------------HHHHHHHHHHHHH-TSCTTCEEEEE
T ss_pred -----C------------------------CC-c---------------------HHHHHHHHHHHHh-CCCcEEEEEeC
Confidence 1 22 3 9999999988876 78789999999
Q ss_pred cCceeeeehhhcCCCcccccCCceeEEEECCc---cCHHHHHHHHHHHHHcCcCCcCCHHHHH-hhcCcEEEEEECCEEE
Q 013702 254 IGGVLLLELFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALVRRTDEELL-KALDSFYVVEREGQII 329 (438)
Q Consensus 254 ~~~~ll~el~~~~g~GT~i~~d~~~~IR~at~---~D~~~I~~L~~~~~~~~~~~~~~~e~l~-~~~~~~~V~~~dg~iV 329 (438)
.|++|+.+||++++.||+|.++ +.+|.++. .|++.|.+|+++++. +...+ +.++ ..+..+|+.+.++
T Consensus 290 ~~~~Ll~eLft~~g~GT~i~~~--e~ir~a~~~~~~D~~~L~~LI~~~~~-~~Lv~---~~le~~~i~~~~v~e~~~--- 360 (460)
T 3s6g_A 290 RPSELARELFTHAGSGTLIRRG--ERMVATDDKSSLDLGRLDNLVKAAFG-RPAVE---GYWDRLRVDRAFVTESYR--- 360 (460)
T ss_dssp CGGGHHHHHHSSCCSSEEEECC--CCEEEESCGGGSCHHHHHHHHHHHSS-SCBCT---THHHHCCCSEEEEETTSS---
T ss_pred CCcHHHHHHhcCCCCceEEEcC--CceEEeccCCcCCHHHHHHHHHHHcC-cccHH---HHHhhcCcceEEEecCCC---
Confidence 9999999999999999999988 46888888 999999999998777 44443 3343 4567788887777
Q ss_pred EEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHH--CCCeE
Q 013702 330 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKS--RGFRE 397 (438)
Q Consensus 330 G~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k--~GF~~ 397 (438)
+.+ +++.+...++|.+|+|+|+||+.|+|..|++++.+.. +.+++.+ ++..+||-+ -|+-.
T Consensus 361 aaa--iv~~~~~~aeL~kfaV~~~~~g~g~gd~l~~~i~~~~-----~~L~Wrsr~~n~~~~Wyf~~s~G~~~ 426 (460)
T 3s6g_A 361 AAA--ITTRLDGWVYLDKFAVLDDARGEGLGRTVWNRMVDYA-----PQLIWRSRTNNPVNGFYFEECDGAVR 426 (460)
T ss_dssp EEE--EEEEETTEEEEEEEEECHHHHHHTHHHHHHHHHHHHC-----SSEEEEEETTCTTHHHHHHHCSEEEE
T ss_pred EEE--EEecCCCCeEEEEEEEChhhhcCCHHHHHHHHHHHhC-----CceEEEeCCCCCccceEEeeeeEEEE
Confidence 222 2234578999999999999999999999999998653 3466655 456777743 46544
|
| >3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=319.43 Aligned_cols=281 Identities=22% Similarity=0.297 Sum_probs=225.6
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~ 95 (438)
++..|+ .|+++|.+ |++++| ++++|++ +++.|||++|+|++||++.|+.+|++|.|||++|++.+.+|+
T Consensus 139 vn~~Lv~aL~~~G~~----Av~lsg---~~~~a~~---~~~~d~g~~G~I~~v~~~~i~~lL~~g~IpVi~pvg~~~~G~ 208 (467)
T 3s6k_A 139 SNLKLVEALQQNGAR----ATSITG---GVFEAEY---LNRDTYGLVGEVKAVNLAPIEASLQAGSIPVITSLGETPSGQ 208 (467)
T ss_dssp HHHHHHHHHHHHTCC----BCCCCS---SSBCCCB---SCSSSSBSBBCCCCBCCHHHHTHHHHTCBCCCCSCCCCSSSC
T ss_pred HHHHHHHHHHhCCCC----ceEEcC---ccEEEEe---ccCcccCccceEEEEcHHHHHHHHHCCCEEEEECceECCCCc
Confidence 455677 88888876 999986 4556664 567899999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCHH-HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCC
Q 013702 96 VLNCNTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQ-EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 173 (438)
Q Consensus 96 ~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~~-e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (438)
.+|+|+|++|+++|.+|+||+|+|+|||+|+. +++++|++++.. |++.++.++.
T Consensus 209 ~~~i~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~~~~lI~~i~~~~e~~~l~~~~~------------------------ 264 (467)
T 3s6k_A 209 ILNVNADFAANELVQELQPYKIIFLTGTGGLLDAEGKLIDSINLSTEYDHLMQQPW------------------------ 264 (467)
T ss_dssp CCBCCHHHHHHHHHHHHCCSSCCCCCSSCSCCCSSCCCCCCCCTTTTTHHHHTSSS------------------------
T ss_pred EEecCHHHHHHHHHHhcCCCEEEEEecccceeCCCCCCccccChHHHHHHHHhcCC------------------------
Confidence 99999999999999999999999999999884 679999999986 7777764321
Q ss_pred CCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccc
Q 013702 174 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGT 253 (438)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~ 253 (438)
.+| | |.+||++|..+++ |++++|+++++
T Consensus 265 -----------------------------~tG-G---------------------M~~Kl~aa~~a~~-gv~~~~iv~g~ 292 (467)
T 3s6k_A 265 -----------------------------ING-G---------------------MRVKIEQIKDLLD-RLPLESSVSIT 292 (467)
T ss_dssp -----------------------------CCS-H---------------------HHHHHHHHHHHHT-TSCSSCCBCCC
T ss_pred -----------------------------CCC-c---------------------hHHHHHHHHHHHh-CCCcEEEEEeC
Confidence 023 3 9999999888775 78889999999
Q ss_pred cCceeeeehhhcCCCcccccCCceeEEEECCc---cCHHHHHHHHHHHHHcCcCCcCCHHHHH-hhcCcEEEEEECCEEE
Q 013702 254 IGGVLLLELFKRDGMGTMVASDLYEGTRTAKV---TDLSGIKQIIQPLVESGALVRRTDEELL-KALDSFYVVEREGQII 329 (438)
Q Consensus 254 ~~~~ll~el~~~~g~GT~i~~d~~~~IR~at~---~D~~~I~~L~~~~~~~~~~~~~~~e~l~-~~~~~~~V~~~dg~iV 329 (438)
.+++++.+||++++.||+|.++ ..+|.++. .|++.|.+|+++++.. .... +.++ ..+..+++.+.++
T Consensus 293 ~~~~Ll~eLft~~g~GT~i~~~--e~ir~a~~~~~~D~~~L~~LI~~~~~~-~Lv~---~yle~~~i~~~~v~e~~~--- 363 (467)
T 3s6k_A 293 RPADLAKELFTHKGSGTLVRRG--ERVLRATSWDELDLPRLTSLIESSFGR-TLVP---DYFSNTKLLRAYVSENYR--- 363 (467)
T ss_dssp CTTTHHHHHHSSCTTSCCBCCC--CCEEEESSTTSSCHHHHHHHHHHHSSS-CCCT---TCTTTCCCSEEEEETTSS---
T ss_pred CchHHHHHHhcCCCcceEEeCC--CceEEccccCcCCHHHHHHHHHHhhcc-chHH---HHHhccCceEEEEecCCc---
Confidence 9999999999999999999988 45888877 8999999999987763 3332 2222 2456777776666
Q ss_pred EEEEEeee---cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHH--CCCeE
Q 013702 330 ACAALFPF---FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKS--RGFRE 397 (438)
Q Consensus 330 G~~~l~~~---~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k--~GF~~ 397 (438)
|++.+++. .....+++.+|+|+|+||+.|+|..|++++.+. .+.+++.+ ++..+||-+ -|+-.
T Consensus 364 aaaiv~~e~~~~~~~~~~L~kfaV~~~~~g~g~~d~l~~~i~~~-----~p~L~Wrsr~~n~~~~Wyf~rs~G~~~ 434 (467)
T 3s6k_A 364 AAVILTDEGMLGASALIYLDKFAVLDDAQGEGLGRAVWNVMREE-----TPQLFWRSRHNNQVNIFYYAESDGCIK 434 (467)
T ss_dssp CEEEEEEECSSTTCSEEEEEEECCCHHHHTTTSHHHHHHHHTTT-----CCSEEEEECSSCTTHHHHHHHCSEEEE
T ss_pred EEEEEeccccCCCCCCeEEEEEEEchhhhcCCHHHHHHHHHHHh-----CCceEEEeCCCCCccceEEeeeeEEEE
Confidence 33434322 125799999999999999999999999988743 34466666 456777743 46554
|
| >4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=302.12 Aligned_cols=284 Identities=19% Similarity=0.259 Sum_probs=227.1
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~ 95 (438)
.+..|+ .|+++|++ |+|++| ++++|+| ++++||||+|+|++||++.|+.||++|.|||++|++++++|+
T Consensus 126 vn~~lv~~L~~~G~~----Avglsg---g~~~a~~---~~~~d~g~vG~I~~v~~~~I~~lL~~G~IPVi~~~g~~~~G~ 195 (464)
T 4ab7_A 126 QNLKLVTALEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQ 195 (464)
T ss_dssp HHHHHHHHHHHTTCC----EEEECS---SSEEEEE---SCTTTTBSBEEEEEECCHHHHHHHHTTCEEEEESEEECTTCB
T ss_pred HHHHHHHHHHhCCCC----eEEECC---CcEEEEe---cCccccCCcCcccccCHHHHHHHHHCCcEEEEcCCcCCCCCC
Confidence 456677 88999986 999985 6778987 467899999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHHHcCCCEEEEEecCcccc--CCCcccccCCHHH-HHHHHHhhhhhhhHHHhHhhhhhcccccccCC
Q 013702 96 VLNCNTYEVATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLIRQRVKQSEIAANYVKAVAEEDITCFGH 172 (438)
Q Consensus 96 ~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~--~~~~~i~~l~~~e-~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (438)
.+|+|+|++|++||.+|+||+|+|+|||+|+. +++++|++++.+| ++.++.++.
T Consensus 196 ~~ni~~D~~Aa~lA~~L~Ad~Li~lTdV~GV~~~~~~~lI~~it~~e~~~~li~~~~----------------------- 252 (464)
T 4ab7_A 196 MLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQSW----------------------- 252 (464)
T ss_dssp EEECCHHHHHHHHHHHHCCSEEEEEESSCSEECTTTCCEECEEEHHHHHHHHHTCSS-----------------------
T ss_pred EEEecHHHHHHHHHHHcCCCEEEEEecccccccCCCCcCCcccCHHHHHHHHHhcCC-----------------------
Confidence 99999999999999999999999999999874 3799999999975 677764432
Q ss_pred CCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHH---cCCCeEEe
Q 013702 173 SDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCR---RGVQRVHL 249 (438)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gv~~~~i 249 (438)
+ +| | |.+||+++..|++ .| ..+||
T Consensus 253 ------~------------------------tg-G---------------------M~pKl~aa~aa~~~v~~g-~~v~I 279 (464)
T 4ab7_A 253 ------V------------------------KY-G---------------------TKLKIREIKELLDYLPRS-SSVAI 279 (464)
T ss_dssp ------C------------------------CH-H---------------------HHHHHHHHHHHHTTSCTT-CEEEE
T ss_pred ------C------------------------CC-c---------------------HHHHHHHHHHHHHhcccC-cEEEE
Confidence 1 22 3 9999995444433 24 57899
Q ss_pred eccccCceeeeehhhcCCCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCc--CCcCCHHHHHhhc-CcEEEEEECC
Q 013702 250 LDGTIGGVLLLELFKRDGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGA--LVRRTDEELLKAL-DSFYVVEREG 326 (438)
Q Consensus 250 ~~g~~~~~ll~el~~~~g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~--~~~~~~e~l~~~~-~~~~V~~~dg 326 (438)
++ +++++.++|++++.||+|.++ +..+|+++.+|++.+.+|...+..+.. ....+.+.+...+ ...+.++.++
T Consensus 280 ~~---~~~ll~eLft~~g~GT~I~~~-~~~~r~a~~~dv~~~~~L~~lL~~s~~~~~~~~~v~~y~~~L~~~~~~iy~d~ 355 (464)
T 4ab7_A 280 IN---VQDLQKELFTDSGAGTMIRRG-YKLVKRSSIGEFPSADALRKALQRDAGISSGKESVASYLRYLENSDFVSYADE 355 (464)
T ss_dssp EE---STTHHHHTTSSSTTSEEEECC-CCCEEESSGGGSSCHHHHHHHHTTSTTTSSSSSCHHHHHHHHHTSCEEEEECT
T ss_pred ec---ChHHHHHHhcCCCCceEEecC-ccccccCChhhhcCHHHHHHHHHhcccccchhhhHHHHHHHhhcCceEEEEeC
Confidence 88 677889999999999999999 889999999998888888776665421 1223566666654 3345566777
Q ss_pred EEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHH--CCCeE
Q 013702 327 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKS--RGFRE 397 (438)
Q Consensus 327 ~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k--~GF~~ 397 (438)
..-|++.+. .+...+++..|+|.|+.|+.|++..+++.+.+.. +.+++.+ ++..+||-+ -|+-.
T Consensus 356 ~y~~~AIv~--~~~~~~~LdkFav~~~~~~~gv~d~vf~~i~~d~-----~~L~Wrsr~~n~~~~Wyf~rs~Gs~~ 424 (464)
T 4ab7_A 356 PLEAVAIVK--KDTNVPTLDKFVCSDAAWLNNVTDNVFNVLRRDF-----PALQWVVSENDANIAWHFDKSQGSYL 424 (464)
T ss_dssp TCSEEEEEE--CSSSSCEEEEEEECHHHHHTTHHHHHHHHHHHHC-----SSEEEEEETTCTTHHHHHHHCSEEEE
T ss_pred CceEEEEEe--cCCCCEEEEEEEEcccccccCHHHHHHHHHHhhC-----CceEEEeCCCCCccceEEeeeeEEEE
Confidence 788888776 3567899999999999999999999999998665 3466655 456777743 35553
|
| >2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=249.96 Aligned_cols=173 Identities=27% Similarity=0.377 Sum_probs=154.7
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEeccc---ccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~---~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ni 99 (438)
.|+++|.+ ++++++.|++++++++.++ .+++|+||+|+|+.++.+.|+.||++|.|||++|++.+++|+.+|+
T Consensus 113 ~L~~~g~~----av~lt~~d~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVv~~v~~~~~G~~~~l 188 (299)
T 2ap9_A 113 LINAHGPY----AVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNI 188 (299)
T ss_dssp HHTTSSSC----EEEEETTGGGCEEEEECCBCSSSCCBCCBSEEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEE
T ss_pred HHHhCCCC----ceEechhHCCEEEEEecccccccccCCCCcceeEEEecHHHHHHHHhCCCeEEECCeeECCCCCEEEE
Confidence 45556654 9999999999999998764 2468999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHcCCCEEEEEecCcccc---C-CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCC
Q 013702 100 NTYEVATACALAIEADKLICIIDGPILD---E-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 175 (438)
Q Consensus 100 naD~~A~~lA~aL~A~~li~ltdv~g~~---~-~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (438)
|+|++|+.+|.+|+||+|+|+|||+|+. | ++++|++++.+|+++++..+
T Consensus 189 ~~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~~~~~i~~is~~e~~~l~~~~--------------------------- 241 (299)
T 2ap9_A 189 NADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDTGTLAQLLPTL--------------------------- 241 (299)
T ss_dssp CHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEEEHHHHHHHGGGS---------------------------
T ss_pred CHHHHHHHHHHHcCCCEEEEEeCChhhhcCCCCCCcChhhcCHHHHHHHHHhh---------------------------
Confidence 9999999999999999999999999884 2 58999999999998884311
Q ss_pred CccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 013702 176 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 255 (438)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~ 255 (438)
+| | |.+||++|..|+++|++|+||+|++.|
T Consensus 242 ----------------------------~g-g---------------------M~~Kl~aa~~a~~~gv~~v~I~~g~~p 271 (299)
T 2ap9_A 242 ----------------------------EL-G---------------------MVPKVEACLRAVIGGVPSAHIIDGRVT 271 (299)
T ss_dssp ----------------------------CT-T---------------------THHHHHHHHHHHHHTCSEEEEEETTST
T ss_pred ----------------------------cC-c---------------------hHHHHHHHHHHHHcCCCEEEEecCCCC
Confidence 33 4 999999999999999999999999999
Q ss_pred ceeeeehhhcCCCcccccCCc
Q 013702 256 GVLLLELFKRDGMGTMVASDL 276 (438)
Q Consensus 256 ~~ll~el~~~~g~GT~i~~d~ 276 (438)
++++.++|++++.||+|.++.
T Consensus 272 ~~ll~~l~~~~~~GT~i~~~~ 292 (299)
T 2ap9_A 272 HCVLVELFTDAGTGTKVVRGE 292 (299)
T ss_dssp THHHHHHHSCCCCSEEEECCC
T ss_pred cHHHHHHhcCCCCcEEEecCC
Confidence 998899999999999998754
|
| >3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-30 Score=247.88 Aligned_cols=153 Identities=29% Similarity=0.384 Sum_probs=137.9
Q ss_pred cc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeec
Q 013702 21 IC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC 99 (438)
Q Consensus 21 l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ni 99 (438)
++ .|+++|.+ +++|+|.|||+++++++ ++.|||++|+|++||++.|+.||++|.|||++|++++++|+.+|+
T Consensus 119 i~~~L~~~G~~----a~~l~g~dg~llta~~~---~~~d~g~vG~i~~v~~~~i~~lL~~g~IPVi~~v~~~~~G~~~~i 191 (279)
T 3l86_A 119 LQEKLRQAGVS----CQQLKSDIKHVVAADYL---DKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGDMLNI 191 (279)
T ss_dssp HHHHHHHTTCC----EEECSGGGGGTEEEEES---CHHHHBSBEEEEEECHHHHHHHHHTTCEEEEESEEECTTSCEEEC
T ss_pred HHHHHHhCCCC----EEEEecCcCCEEEeecc---CccccCcccccchhhHHHHHHHHhCCcEEEECCcEECCCCCEeec
Confidence 44 56666665 99999999999999985 668999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHcCCCEEEEEecCccccCCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccc
Q 013702 100 NTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSV 179 (438)
Q Consensus 100 naD~~A~~lA~aL~A~~li~ltdv~g~~~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (438)
|+|++|+++|.+|+||+|+|+|||+|+..++++|++++.+|+++++..+.
T Consensus 192 ~~D~~Aa~lA~~L~Ad~LiilTDVdGV~~d~~~I~~i~~~e~~~l~~~~~------------------------------ 241 (279)
T 3l86_A 192 NADYLATAVAVALAADKLILMTNVKGVLENGAVLEKITSHQVQEKIDTAV------------------------------ 241 (279)
T ss_dssp CHHHHHHHHHHHTTCSEEEEECSSSSCEETTEECCEEEGGGSHHHHHTTS------------------------------
T ss_pred CHHHHHHHHHHHcCCCEEEEEeCCCccccCCEehhhccHHHHHHHHhCCC------------------------------
Confidence 99999999999999999999999999988899999999999999875432
Q ss_pred cccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 013702 180 YSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 255 (438)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~ 255 (438)
.+| | |.+||++|..|++.||+|+||+|+..+
T Consensus 242 -----------------------~tG-G---------------------M~~Kl~aa~~a~~~Gv~~v~I~~~~~~ 272 (279)
T 3l86_A 242 -----------------------ITA-G---------------------MIPKIESAAKTVAAGVGQVLIGDNLLT 272 (279)
T ss_dssp -----------------------SCT-T---------------------HHHHHHHHHHHHHTTCSEEEEESSSSC
T ss_pred -----------------------CcC-c---------------------HHHHHHHHHHHHHcCCCEEEEeccCCC
Confidence 133 4 999999999999999999999986533
|
| >2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=243.43 Aligned_cols=174 Identities=29% Similarity=0.498 Sum_probs=154.9
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccc--c-------CCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCC
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV--D-------GVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSS 93 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~--~-------~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~ 93 (438)
.|+++|.+ ++++++.|++++++++.+.. + ++|+|++|+|+.+|.+.|+.||++|.|||++|++.+++
T Consensus 114 ~l~~~g~~----a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~ 189 (300)
T 2buf_A 114 LINRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSN 189 (300)
T ss_dssp HHHHTTCC----EEEEEETGGGCEEEEECCCCCC--------CCCCBSBEEEEEECHHHHHHHHHTTCEEEEEEEEECTT
T ss_pred HHHhCCCC----EEEecCCCCCeeeeeeccccccchhhcccccccCCcceeEEEECHHHHHHHHHCCCEEEEcCceeCCC
Confidence 55566665 99999999999999987532 2 35899999999999999999999999999999999999
Q ss_pred CCeeecChHHHHHHHHHHcCCCEEEEEecCccccC-CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCC
Q 013702 94 GEVLNCNTYEVATACALAIEADKLICIIDGPILDE-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGH 172 (438)
Q Consensus 94 g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~~-~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (438)
|+.+|+|+|++|+.+|.+|+||+|+|+|||+|+.. ++++|++++.+|+++++..+.
T Consensus 190 G~~~~i~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~~a~~i~~i~~~e~~~~~~~~~----------------------- 246 (300)
T 2buf_A 190 GESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIADGT----------------------- 246 (300)
T ss_dssp SCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCEECHHHHHHHHHTTC-----------------------
T ss_pred CCEEEECHHHHHHHHHHHcCCCEEEEEeCCCCeECCCCcChhhCCHHHHHHHHHcCC-----------------------
Confidence 99999999999999999999999999999999854 699999999999999875532
Q ss_pred CCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecc
Q 013702 173 SDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDG 252 (438)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g 252 (438)
+ +| | |.+||++|..|+++|++|+||+|+
T Consensus 247 ------~------------------------~g-g---------------------M~~Kv~aa~~a~~~gv~~v~I~~g 274 (300)
T 2buf_A 247 ------I------------------------YG-G---------------------MLPKIRCALEAVQGGVTSAHIIDG 274 (300)
T ss_dssp ------S------------------------CT-T---------------------HHHHHHHHHHHHHTTCSEEEEEET
T ss_pred ------C------------------------CC-c---------------------cHHHHHHHHHHHHhCCCEEEEeeC
Confidence 0 22 4 999999999999999999999999
Q ss_pred ccCceeeeehhhcCCCcccccCC
Q 013702 253 TIGGVLLLELFKRDGMGTMVASD 275 (438)
Q Consensus 253 ~~~~~ll~el~~~~g~GT~i~~d 275 (438)
+.|++++.++|++++.||.|.++
T Consensus 275 ~~~~~ll~~~~~~~~~GT~i~~~ 297 (300)
T 2buf_A 275 RVPNAVLLEIFTDSGVGTLISNR 297 (300)
T ss_dssp TSTTHHHHHHSSTTCCSEEEECC
T ss_pred CCCchHHHHHhcCCCCceEEEeC
Confidence 99998888999999999999764
|
| >2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=246.71 Aligned_cols=173 Identities=28% Similarity=0.440 Sum_probs=154.4
Q ss_pred cc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeec
Q 013702 21 IC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC 99 (438)
Q Consensus 21 l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ni 99 (438)
++ .|+++|.+ ++++++.+++++++++.+ +++|+|++|+++.+|.+.|+.||++|.|||++|++.++.|+.+|+
T Consensus 121 l~~~l~~~g~~----a~~l~~~~~~~l~~~~~~--~~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i 194 (298)
T 2rd5_A 121 LVSLINAAGAT----AVGLSGHDGRLLTARPVP--NSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNI 194 (298)
T ss_dssp HHHHHHHTTSC----EEEEETTGGGCEEEEECT--THHHHBSEEEEEEECGGGHHHHHHTTCEEEEESEEECTTSCEEEE
T ss_pred HHHHHHhCCCC----ccccChHHCCEEEEEeCC--ccccCCcceEEEEECHHHHHHHHhCCCEEEEcCeeECCCCCEEEE
Confidence 44 66777765 999999999999999865 336899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHcCCCEEEEEecCccccC----CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCC
Q 013702 100 NTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 175 (438)
Q Consensus 100 naD~~A~~lA~aL~A~~li~ltdv~g~~~----~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (438)
|+|++|+.+|.+|+||+|+|+|||+|+.. ++++|++++.+|+++++..+.
T Consensus 195 ~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~~a~~i~~is~~e~~~~~~~g~-------------------------- 248 (298)
T 2rd5_A 195 NADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGK-------------------------- 248 (298)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEESSSSEESSSSCTTSEECEEEHHHHHHHHHTTS--------------------------
T ss_pred CHHHHHHHHHHHcCCCEEEEEeCCcCeecCCCCCCCCcccCCHHHHHHHHHCCC--------------------------
Confidence 99999999999999999999999999842 389999999999999976542
Q ss_pred CccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 013702 176 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 255 (438)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~ 255 (438)
+ +| | |.+||++|..|+++|++++||+|++.|
T Consensus 249 ---~------------------------~g-G---------------------M~~Kl~aa~~a~~~gv~~v~I~~g~~~ 279 (298)
T 2rd5_A 249 ---V------------------------AG-G---------------------MIPKVKCCIRSLAQGVKTASIIDGRRQ 279 (298)
T ss_dssp ---S------------------------CT-T---------------------HHHHHHHHHHHHHTTCSEEEEEETTST
T ss_pred ---C------------------------CC-c---------------------hHHHHHHHHHHHHcCCCeEEEecCCCC
Confidence 0 23 4 999999999999999999999999999
Q ss_pred ceeeeehhhcCCCcccccC
Q 013702 256 GVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 256 ~~ll~el~~~~g~GT~i~~ 274 (438)
++|+.++|++++.||.|.+
T Consensus 280 ~~ll~~l~~~~~~GT~i~~ 298 (298)
T 2rd5_A 280 HSLLHEIMSDEGAGTMITG 298 (298)
T ss_dssp THHHHHHHSSSCSEEEEEC
T ss_pred chHHHHHhcCCCCceEEeC
Confidence 9887899999999999863
|
| >2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.2e-29 Score=247.05 Aligned_cols=173 Identities=29% Similarity=0.477 Sum_probs=154.9
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ ++|+++.+++++++++.+ ++|+|++|+|+.+|.+.|+.||++|.|||++|++.+++|+.+|+|+|
T Consensus 137 ~L~~~g~~----a~gl~~~~a~~l~a~~~~---~~d~g~~g~v~~v~~~~i~~lL~~g~IpVi~~v~~~~~G~~~~i~~D 209 (321)
T 2v5h_A 137 RINTTGGR----AVGFCGTDGRLVLARPHD---QEGIGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINAD 209 (321)
T ss_dssp HHHHHTCC----EEEECTTGGGSEEEEECS---SCSSBSBEEEEEECGGGTHHHHHTTCEEEEESEEECTTSCEEECCHH
T ss_pred HHHhCCCC----eeeeChhhccEEEeecCC---CccccccceeEEecHHHHHHHHHCCCeEEEeCceECCCCCEEEeCHH
Confidence 56667765 999999999999999865 47999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccc---C-CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCcc
Q 013702 103 EVATACALAIEADKLICIIDGPILD---E-SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGS 178 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g~~---~-~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (438)
++|+.+|.+|+||+|+|+|||+|+. | ++++|++|+.+|+++++..+.
T Consensus 210 ~~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~~a~~i~~is~~e~~~l~~~g~----------------------------- 260 (321)
T 2v5h_A 210 TVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRELIAQGI----------------------------- 260 (321)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSSCBSSTTCTTCBCCEEEHHHHHHHHHTTS-----------------------------
T ss_pred HHHHHHHHHcCCCEEEEeeCCCceEcCCCCCCeeeeEEcHHHHHHHHhCCC-----------------------------
Confidence 9999999999999999999999884 2 489999999999999875542
Q ss_pred ccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCcee
Q 013702 179 VYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVL 258 (438)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~l 258 (438)
+ +| | |.+||++|..|+++|++++||+|++.++++
T Consensus 261 ~------------------------~g-G---------------------M~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~l 294 (321)
T 2v5h_A 261 V------------------------GG-G---------------------MIPKVDCCIRSLAQGVRAAHIIDGRIPHAL 294 (321)
T ss_dssp S------------------------CT-T---------------------HHHHHHHHHHHHHTTCSEEEEEETTSTTHH
T ss_pred C------------------------cC-c---------------------HHHHHHHHHHHHHcCCCEEEEEeCCCCchH
Confidence 0 23 4 999999999999999999999999999988
Q ss_pred eeehhhcCCCcccccCCce
Q 013702 259 LLELFKRDGMGTMVASDLY 277 (438)
Q Consensus 259 l~el~~~~g~GT~i~~d~~ 277 (438)
+.++|++++.||.|..+.|
T Consensus 295 l~~l~~~~~~GT~I~~~~~ 313 (321)
T 2v5h_A 295 LLEIFTDAGIGTMIVGSGY 313 (321)
T ss_dssp HHHHHCCCCSEEEEECC--
T ss_pred HHHHhcCCCCceEEECCcc
Confidence 8899999999999998766
|
| >2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=240.41 Aligned_cols=173 Identities=31% Similarity=0.496 Sum_probs=153.5
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ ++++++.+++++++++.++ +.|+|++|+|+.+|.+.|+.||++|.|||++|++.+++|+.+|+|+|
T Consensus 109 ~l~~~g~~----a~~l~~~~~~~l~~~~~~~--~~d~g~~g~v~~~~~~~i~~ll~~g~IpVi~~v~~~~~G~~~~~~~D 182 (282)
T 2bty_A 109 NLNLHGGR----AVGICGKDSKLIVAEKETK--HGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINAD 182 (282)
T ss_dssp HHHTTTCC----EEEEETTGGGSEEEEECCT--TCCCBSBEEEEEECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHH
T ss_pred HHHhCCCC----ceecChhhCCEEEEecCCc--ccCCCcceEEEEecHHHHHHHHHCCCEEEECCCccCCCCCEEEECHH
Confidence 55666664 9999999999999998653 45899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCccccCCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCcccccc
Q 013702 103 EVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSS 182 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g~~~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (438)
++|+.+|.+|+||+|+|+|||+|+..+.++|++++.+|+++++..|. +
T Consensus 183 ~~Aa~lA~~l~Ad~liilTDVdGvy~~~~~i~~i~~~e~~~~~~~g~-----------------------------~--- 230 (282)
T 2bty_A 183 TAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGT-----------------------------V--- 230 (282)
T ss_dssp HHHHHHHHHHTCSEEEEEESSSSCEETTEECCEECHHHHHHHHTTTC-----------------------------S---
T ss_pred HHHHHHHHHcCCCEEEEEeCCCCeecCchhhhhCCHHHHHHHHHcCC-----------------------------C---
Confidence 99999999999999999999998842229999999999998864432 1
Q ss_pred CCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeeh
Q 013702 183 QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLEL 262 (438)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el 262 (438)
+| | |.+|+++|..|+++|++++||+|++.|++++.++
T Consensus 231 ---------------------~g-G---------------------M~~K~~aa~~a~~~gv~~v~I~~g~~~~~ll~~~ 267 (282)
T 2bty_A 231 ---------------------TG-G---------------------MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEI 267 (282)
T ss_dssp ---------------------CT-T---------------------HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHH
T ss_pred ---------------------CC-c---------------------HHHHHHHHHHHHHhCCCeEEEecCCCCchHHHHH
Confidence 23 4 9999999999999999999999999999887899
Q ss_pred hhcCCCcccccCCc
Q 013702 263 FKRDGMGTMVASDL 276 (438)
Q Consensus 263 ~~~~g~GT~i~~d~ 276 (438)
|++++.||.|.+++
T Consensus 268 ~~~~~~GT~i~~~~ 281 (282)
T 2bty_A 268 FSRKGIGTMIKELE 281 (282)
T ss_dssp SSSSCSSEEECCCC
T ss_pred hcCCCCceEEEeCC
Confidence 99999999998653
|
| >3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=241.50 Aligned_cols=171 Identities=23% Similarity=0.328 Sum_probs=144.3
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCC
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGE 95 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~ 95 (438)
.+..|+ .|+++|.+ |++++| ++++|+| ++++||||+|+|++||++.|+.+|++|.|||++|++++.+|+
T Consensus 126 vn~~lv~~L~~~G~~----Av~l~g---g~~~a~~---~~~~d~g~~G~i~~v~~~~i~~lL~~g~IpVi~~~g~~~~G~ 195 (307)
T 3zzh_A 126 QNLKLVTALEQLGVR----ARPITS---GVFTADY---LDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQ 195 (307)
T ss_dssp HHHHHHHHHHHTTCC----EEEECS---SSEEEEE---SCHHHHBSBEEEEEECCHHHHHHHHHTCEEEECCCEECTTCB
T ss_pred HHHHHHHHHHhCCCC----eeEEcC---CcEEEEe---cCccccCccccccccCHHHHHHHHHCCCEEEEeCCeECCCCc
Confidence 456677 88888876 999985 5678987 467899999999999999999999999999999999999999
Q ss_pred eeecChHHHHHHHHHHcCCCEEEEEecCcccc--CCCcccccCCHHH-HHHHHHhhhhhhhHHHhHhhhhhcccccccCC
Q 013702 96 VLNCNTYEVATACALAIEADKLICIIDGPILD--ESGHLIRFLTLQE-ADSLIRQRVKQSEIAANYVKAVAEEDITCFGH 172 (438)
Q Consensus 96 ~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~--~~~~~i~~l~~~e-~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 172 (438)
.+|+|+|++|+++|.+|+||+|+|+|||+|+. +++++|++++..| +++++.++.
T Consensus 196 ~~~i~~D~~A~~lA~~L~Ad~Li~lTdV~GV~~~~~~~~i~~i~~~e~~~~l~~~~~----------------------- 252 (307)
T 3zzh_A 196 MLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQSW----------------------- 252 (307)
T ss_dssp EEBCCHHHHHHHHHHHHCCSEEEEECSSCSCEETTTTEECCEEEHHHHHHHHHTSTT-----------------------
T ss_pred EEecCHHHHHHHHHHhCCCCEEEEEeCCcceecCCCCcCCcccCHHHHHHHHHhCCC-----------------------
Confidence 99999999999999999999999999999884 5899999999975 677764432
Q ss_pred CCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHH---HHcCCCeEEe
Q 013702 173 SDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV---CRRGVQRVHL 249 (438)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gv~~~~i 249 (438)
+ +| | |.+||+++..| +++| ..++|
T Consensus 253 ------~------------------------tG-G---------------------M~~Kl~aa~~a~~~v~~g-~~v~I 279 (307)
T 3zzh_A 253 ------V------------------------KY-G---------------------TKLKIREIKELLDYLPRS-SSVAI 279 (307)
T ss_dssp ------S------------------------CH-H---------------------HHHHHHHHHHHHHHSCTT-CCEEE
T ss_pred ------C------------------------CC-c---------------------HHHHHHHHHHHHHHhccC-eEEEE
Confidence 1 22 3 99999854433 3346 56999
Q ss_pred eccccCceeeeehhhcCCCcccccCCc
Q 013702 250 LDGTIGGVLLLELFKRDGMGTMVASDL 276 (438)
Q Consensus 250 ~~g~~~~~ll~el~~~~g~GT~i~~d~ 276 (438)
++ +++++.++|++++.||+|.+..
T Consensus 280 ~~---~~~ll~elft~~g~GT~I~~~~ 303 (307)
T 3zzh_A 280 IN---VQDLQKELFTDSGAGTMIRRGY 303 (307)
T ss_dssp EC---GGGHHHHHHSCCCCSEEEECCC
T ss_pred eC---ccHHHHHHhcCCCCcEEEecCC
Confidence 98 7788899999999999998754
|
| >1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-27 Score=228.53 Aligned_cols=168 Identities=24% Similarity=0.323 Sum_probs=150.6
Q ss_pred cc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeec
Q 013702 21 IC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC 99 (438)
Q Consensus 21 l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ni 99 (438)
|+ .|+++|.+ |+++++.|++++++++.+ .|+|++|+++.++++.|+.+|++|.|||++|++.+++|+++|+
T Consensus 88 l~~~l~~~G~~----a~~l~~~~~~~~~~~~~~----~d~~~~g~~~~~~~~~i~~ll~~g~ipVi~~~g~~~~g~~~~~ 159 (258)
T 1gs5_A 88 LLAWAKKHQIA----AVGLFLGDGDSVKVTQLD----EELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNV 159 (258)
T ss_dssp HHHHHHHTTCC----EEEECTTGGGCEEEEECC----GGGBSBEEEEECCCHHHHHHHHTTCEEEECSEEECTTSCEEEC
T ss_pred HHHHHHHCCCC----eEEEeecCCCEEEEEEcC----CCCCCcCceeEECHHHHHHHHHCCCEEEEeCCcCCCCCcEEEe
Confidence 45 66778876 999999999999999864 6899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHcCCCEEEEEecCcccc-CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCcc
Q 013702 100 NTYEVATACALAIEADKLICIIDGPILD-ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGS 178 (438)
Q Consensus 100 naD~~A~~lA~aL~A~~li~ltdv~g~~-~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (438)
|+|++|+.+|.+|+|| |+|+|||+|+. .++++|++++.+|+++++..+.
T Consensus 160 ~~D~~Aa~lA~~l~Ad-li~ltdV~Gv~~~d~~~i~~i~~~e~~~l~~~~~----------------------------- 209 (258)
T 1gs5_A 160 NADQAATALAATLGAD-LILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGI----------------------------- 209 (258)
T ss_dssp CHHHHHHHHHHHHTCE-EEEEESSSSCBCTTSCBCCEECHHHHHHHHHTTC-----------------------------
T ss_pred cHHHHHHHHHHHhCCc-EEEEeCCCceECCCCCCCcccCHHHHHHHHhcCC-----------------------------
Confidence 9999999999999999 99999999885 5799999999999999975542
Q ss_pred ccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCcee
Q 013702 179 VYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVL 258 (438)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~l 258 (438)
+ +| | |.+|+.+|..+|+.++.++||+|++.|+.
T Consensus 210 ~------------------------~g-G---------------------m~~k~~~a~~~~~~~~~~v~I~~~~~~~~- 242 (258)
T 1gs5_A 210 I------------------------TD-G---------------------MIVKVNAALDAARTLGRPVDIASWRHAEQ- 242 (258)
T ss_dssp S------------------------CT-H---------------------HHHHHHHHHHHHHHHTSCEEEEESSCGGG-
T ss_pred C------------------------CC-c---------------------HHHHHHHHHHHHHhCCCEEEEecCCCchH-
Confidence 1 22 3 99999999999987666899999999987
Q ss_pred eeehhhcCCCccccc
Q 013702 259 LLELFKRDGMGTMVA 273 (438)
Q Consensus 259 l~el~~~~g~GT~i~ 273 (438)
+.++|++++.||+|.
T Consensus 243 l~~~~~~~~~GT~i~ 257 (258)
T 1gs5_A 243 LPALFNGMPMGTRIL 257 (258)
T ss_dssp HHHHHTTCCSSEEEC
T ss_pred HHHHhcCCCCcEEEe
Confidence 679999999999986
|
| >3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-26 Score=225.04 Aligned_cols=175 Identities=11% Similarity=0.182 Sum_probs=137.4
Q ss_pred hhhhhHhhhCCCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEE
Q 013702 7 IRMMIEAKLSPGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVIL 85 (438)
Q Consensus 7 ~~~~~~a~ls~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi 85 (438)
+|.+-++.+..+..|+ .|+++|.+ |+++++.|+++++ +|+|+++|++.|+.||++|.|||+
T Consensus 80 ~rvT~~~~~~ln~~l~~~L~~~G~~----a~~l~g~~~~~~~--------------~g~v~~v~~~~i~~lL~~g~ipVi 141 (269)
T 3ll9_A 80 FALTQNWVKKLNSHVCDALLAEGIP----AVSMQPSAFIRAH--------------AGRISHADISLIRSYLEEGMVPVV 141 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC----EEECCGGGTEEEE--------------TTEEEEECCHHHHHHHHTTCEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCc----EEEEcchHcCeEe--------------cCeeeeecHHHHHHHHHCCCEEEE
Confidence 4444555555555566 88888886 9999999998776 799999999999999999999999
Q ss_pred cC-cccCCC--CCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHH
Q 013702 86 SN-LGYSSS--GEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIA 155 (438)
Q Consensus 86 ~~-i~~~~~--g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~ 155 (438)
+| ++++++ |+.+|+|+|++|+.+|.+|+||+|+|+|||+|++ ++.++|++++..|+++++....
T Consensus 142 ~~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~~e~~~~l~~~~------ 215 (269)
T 3ll9_A 142 YGDVVLDSDRRLKFSVISGDQLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGSLDDLESLDGTL------ 215 (269)
T ss_dssp ECEEEEBSCTTTSEEEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC-----------------
T ss_pred CCCEEecccccCcceecchHHHHHHHHHHcCCCeEEEecCCCEEEcCCCCcCCcceEccccCHHHHHHHhcccC------
Confidence 99 788888 9999999999999999999999999999999873 3467899999999877654210
Q ss_pred HhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHH
Q 013702 156 ANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAA 235 (438)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (438)
..+.+| | |.+||++
T Consensus 216 --------------------------------------------~~~~tg-G---------------------M~~Kl~a 229 (269)
T 3ll9_A 216 --------------------------------------------NTDVTG-G---------------------MVGKIRE 229 (269)
T ss_dssp --------------------------------------------------------------------------SHHHHH
T ss_pred --------------------------------------------CCcCcC-C---------------------cHHHHHH
Confidence 001133 3 9999999
Q ss_pred HHHHHHcCCCeEEeeccccCceeeeehhhcCCC-ccccc
Q 013702 236 AAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGM-GTMVA 273 (438)
Q Consensus 236 ~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~-GT~i~ 273 (438)
|..||++|+ ++||+|++.|++++ ++|++++. ||+|.
T Consensus 230 a~~a~~~Gv-~v~I~~g~~~~~l~-~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 230 LLLLAEKGV-ESEIINAAVPGNIE-RALLGEEVRGTRIT 266 (269)
T ss_dssp HHHHHHTTC-CEEEEESSSTTHHH-HHHHTCCCSSEEC-
T ss_pred HHHHHhCCC-eEEEEeCCCchHHH-HHHCCCCCCcEEEE
Confidence 999999999 79999999999875 99999999 99986
|
| >3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-24 Score=208.46 Aligned_cols=174 Identities=10% Similarity=0.033 Sum_probs=141.8
Q ss_pred hhhhHhhhCCCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEc
Q 013702 8 RMMIEAKLSPGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILS 86 (438)
Q Consensus 8 ~~~~~a~ls~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~ 86 (438)
|.+.++.+..+..++ .|+++|.+ ++++++.|.++++ .| +.+|.+.|+.+|++|.|||++
T Consensus 90 r~T~~a~~~ln~~l~~~l~~~G~~----a~~l~~~d~~~~~--------------~g--~~v~~~~i~~lL~~g~ipVi~ 149 (266)
T 3k4o_A 90 WEIQRAMRRFNNIIIDTLQSYDIP----AVSIQPSSFVVFG--------------DK--LIFDTSAIKEMLKRNLVPVIH 149 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCC----EEEECGGGTCEES--------------SS--CBCCCHHHHHHHHTTCEEEEE
T ss_pred eHHHHHHHHHHHHHHHHHHHCCCc----EEEeeHHHcCccc--------------Cc--eEecHHHHHHHHHCCCEEEEe
Confidence 444445554444566 78888876 9999998887654 13 689999999999999999999
Q ss_pred C-cccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCccccCCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcc
Q 013702 87 N-LGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEE 165 (438)
Q Consensus 87 ~-i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~ 165 (438)
| ++.+++|+.+|+|+|++|+.+|.+|+||+|+|+|||+|++.|+++|++++..|++++++.-.
T Consensus 150 ~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~d~~~i~~~~~~e~~~l~~~~~---------------- 213 (266)
T 3k4o_A 150 GDIVIDDKNGYRIISGDDIVPYLANELKADLILYATDVDGVLIDNKPIKRIDKNNIYKILNYLS---------------- 213 (266)
T ss_dssp CEEEEESSSCEEEECHHHHHHHHHHHHTCSEEEEEESSSSSBSSSSBCSEECTTTHHHHHHHHH----------------
T ss_pred CCEEEcCCCCeeeeCHHHHHHHHHHHcCCCEEEEEecCCeEEeCCeecCcCCHHHHHHHHHHhc----------------
Confidence 8 78888899999999999999999999999999999999888899999999988888764310
Q ss_pred cccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCC
Q 013702 166 DITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQ 245 (438)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 245 (438)
+.++.+.+| | |.+||++|..||+
T Consensus 214 -------------------------------~~~~~~~tG-------------G---------M~~Kv~aa~~a~~---- 236 (266)
T 3k4o_A 214 -------------------------------GSNSIDVTG-------------G---------MKYKIEMIRKNKC---- 236 (266)
T ss_dssp -------------------------------STTCSCCSS-------------H---------HHHHHHHHHHTTC----
T ss_pred -------------------------------cccCCcccC-------------C---------HHHHHHHHHHHhc----
Confidence 001112233 3 9999999999997
Q ss_pred eEEeeccccCceeeeehhhcCCCcccccCC
Q 013702 246 RVHLLDGTIGGVLLLELFKRDGMGTMVASD 275 (438)
Q Consensus 246 ~~~i~~g~~~~~ll~el~~~~g~GT~i~~d 275 (438)
++||+|++.++. +.++|++++.||+|.+.
T Consensus 237 ~v~I~~g~~~~~-l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 237 RGFVFNGNKANN-IYKALLGEVEGTEIDFS 265 (266)
T ss_dssp EEEEEETTSTTH-HHHHHTTCCCSEEEECC
T ss_pred CEEEEeCCCccH-HHHHhCCCCCceEEEeC
Confidence 899999999996 68999999999999764
|
| >2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.9e-25 Score=216.46 Aligned_cols=187 Identities=19% Similarity=0.181 Sum_probs=144.9
Q ss_pred ccchhhhhHhhhCCCCCcccccccCCCCC----cceeeeeeecccEEEEEec-cc-cc-------CCCccee--ee----
Q 013702 4 AGGIRMMIEAKLSPGPPICNIRRHGDSSR----WHEVGVSVASGNFLAAKRK-GV-VD-------GVDYGAT--GE---- 64 (438)
Q Consensus 4 ~g~~~~~~~a~ls~~~~l~~l~~~g~~~~----~~avgl~g~~g~~i~a~~~-~~-~~-------~~d~g~v--G~---- 64 (438)
.|.++++++..|+.. |+++|.+.. +..++|++.|++|+.+++. |. .+ ..++||+ |+
T Consensus 86 ~G~i~~~l~~~l~~~-----l~~~g~~a~~~~v~~qv~l~~~d~~f~~~~k~~g~~~~~~~a~~~~~~~g~~~~~~~g~g 160 (316)
T 2e9y_A 86 QAWIGLLLKHSLEEE-----LRRRGLNVLVPVVISRVLVDVSDPSFNNPSKPVGPIYGREEAEELSRRYGWVFKRDPRGG 160 (316)
T ss_dssp HHHHHHHHHHHHHHH-----HHHTTCCCCCCEECCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSS
T ss_pred HhHHHHHHHHHHHHH-----HHhcCCCccccceeeEEEeccccccccccccccccccchhhhhhhhhhcceeeecccccc
Confidence 455555555555543 345554311 1128999999998887753 22 11 1357775 65
Q ss_pred ----------EeeeCHHHHHHHhcCCceEEEc-----CcccCCCC----CeeecChHHHHHHHHHHcCCCEEEEEecCcc
Q 013702 65 ----------VKKVDVTRMRERLDGGCLVILS-----NLGYSSSG----EVLNCNTYEVATACALAIEADKLICIIDGPI 125 (438)
Q Consensus 65 ----------v~~v~~~~i~~ll~~g~IPVi~-----~i~~~~~g----~~~ninaD~~A~~lA~aL~A~~li~ltdv~g 125 (438)
|+.++.+.|+.||++|.|||++ |++.+++| ..+|+|+|++|+++|.+|+||+|+|+|||+|
T Consensus 161 ~r~vv~sp~~i~~v~~~~i~~lL~~g~IpI~~g~~g~pv~~~~~g~~~g~~~~id~D~~Aa~lA~~l~Ad~LiilTdVdG 240 (316)
T 2e9y_A 161 FRRVVPSPRPVSIVDRDLIAEASAESPAVVALGGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADLLVILTDVPG 240 (316)
T ss_dssp EEEEECCCCEEEETTHHHHHHHHHHCSEEEECGGGCEEEEECTTSCEEECSCCCCHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred ceecccCCCcceeehHHHHHHHHHCCCEEEEECCCCCCeeECCCCCeecceeeeCHHHHHHHHHHHcCCCEEEEEeCchH
Confidence 7889999999999999999998 88889888 6778899999999999999999999999998
Q ss_pred cc-----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCC
Q 013702 126 LD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGV 200 (438)
Q Consensus 126 ~~-----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (438)
++ +++++|++++.+|+++++..+.
T Consensus 241 Vy~dp~~p~a~~i~~i~~~e~~~~~~~g~--------------------------------------------------- 269 (316)
T 2e9y_A 241 VAVNYGREGERWLRRAAASELKKYLREGH--------------------------------------------------- 269 (316)
T ss_dssp CEETTTSTTCEECSEEEHHHHHHHHHTTC---------------------------------------------------
T ss_pred hhCCCCCCCCcCCcEEcHHHHHHHHhcCC---------------------------------------------------
Confidence 73 3589999999999999975532
Q ss_pred ccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 201 GFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 201 ~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
+.+| | |.+||++|..|+++|++++||++ ++. +.++|++ +.||+|.+
T Consensus 270 -~~~G-g---------------------M~~Kv~aa~~a~~~gv~~v~I~~---~~~-l~~~l~g-~~GT~i~~ 315 (316)
T 2e9y_A 270 -FPPG-S---------------------MGPKVEAAISFVERTGKPAVIGS---LEE-ARQVLSL-QAGTVVML 315 (316)
T ss_dssp -SCTT-T---------------------HHHHHHHHHHHHHHHCSCEEEEE---STT-HHHHHTT-SSSEEEEC
T ss_pred -CCCC-C---------------------HHHHHHHHHHHHHcCCCeEEECc---HHH-HHHHHcC-CCCeEEec
Confidence 1133 3 99999999999999999999997 333 5788887 88999864
|
| >3e0k_A Amino-acid acetyltransferase; N-acetylglutamate synthase, structu genomics, PSI-2, protein structure initiative; HET: MSE; 2.52A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.89 E-value=9e-23 Score=177.23 Aligned_cols=149 Identities=35% Similarity=0.698 Sum_probs=137.1
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcccc
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 355 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yR 355 (438)
.+++||+++++|++.+.+++.......+..+++.+.+...+..+++++.++++||++.+.+..+...++|..++|+|+||
T Consensus 2 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~~~V~p~~r 81 (150)
T 3e0k_A 2 NAEQVRQAGIDDIGGILELIHPLEEQGILVRRSREQLEQEIGKFTIIEKDGLIIGCAALYPYSEERKAEMACVAIHPDYR 81 (150)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHHHTTCC-CCCHHHHHHHGGGEEEEEETTEEEEEEEEEEEGGGTEEEEEEEEECGGGC
T ss_pred chheeecCCHhhHHHHHHHHHHHhhcccccccCHHHHHHHHHheEEEEECCEEEEEEEEEEcCCCCeEEEEEEEECHHHh
Confidence 35689999999999999999998888888899999999988899999999999999999877667889999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEcc
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
|+|||++|++.+++++++.|+..+++.+.++.+||+|+||+.++...+|..++..|++.+++++|+|++
T Consensus 82 g~Gig~~Ll~~~~~~a~~~g~~~i~l~n~~a~~~y~k~GF~~~~~~~~~~~~~~~~~~~~~~~v~~k~l 150 (150)
T 3e0k_A 82 DGNRGLLLLNYMKHRSKSENINQIFVLTTHSLHWFREQGFYEVGVDYLPGAKQGLYNFQRKSKILALDL 150 (150)
T ss_dssp SSSHHHHHHHHHHHHHHTTTCCEEECCCSSCHHHHHHHTCCCCCGGGSCGGGHHHHTC-CCCCCCCCCC
T ss_pred ccCHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHHcCCeecCcccChHHHHhhcCcccCccchhccC
Confidence 999999999999999999999999998888999999999999999999999999999999999999865
|
| >1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-23 Score=206.58 Aligned_cols=185 Identities=19% Similarity=0.208 Sum_probs=141.0
Q ss_pred cchhhhhHhhhCCCCCcccccccCCCC----CcceeeeeeecccEEEEEec-c-cccC-------CCccee--ee-----
Q 013702 5 GGIRMMIEAKLSPGPPICNIRRHGDSS----RWHEVGVSVASGNFLAAKRK-G-VVDG-------VDYGAT--GE----- 64 (438)
Q Consensus 5 g~~~~~~~a~ls~~~~l~~l~~~g~~~----~~~avgl~g~~g~~i~a~~~-~-~~~~-------~d~g~v--G~----- 64 (438)
|.+++.+++.|+.. |+++|.+. -+..+++++.|++|..+++. + ++.+ .|+||+ |+
T Consensus 87 G~i~~~l~~~l~~~-----l~~~gi~a~~~~~~~qv~l~~~d~~f~~~~k~~g~~~t~~~a~~~~~~~g~~~~g~~~~~~ 161 (314)
T 1e19_A 87 GWIGYMIQQALKNE-----LRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGW 161 (314)
T ss_dssp HHHHHHHHHHHHHH-----HHHTTCCCCEEEBCCEEEECTTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSCE
T ss_pred hHHHHHHHHHHHHH-----HHHcCCchhhhhhheeeeecccchhhccccccccceecHHHhhhhhhhcCccccccccccc
Confidence 55666666665543 34555541 01127899999877766543 2 1110 246664 54
Q ss_pred ---------EeeeCHHHHHHHhcCCceEEEc-----CcccCCC---CCeeecChHHHHHHHHHHcCCCEEEEEecCcccc
Q 013702 65 ---------VKKVDVTRMRERLDGGCLVILS-----NLGYSSS---GEVLNCNTYEVATACALAIEADKLICIIDGPILD 127 (438)
Q Consensus 65 ---------v~~v~~~~i~~ll~~g~IPVi~-----~i~~~~~---g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~ 127 (438)
|+.|+++.|+.||++|.|||++ |++.+.+ |..+|+|+|++|+++|.+|+||+|+|+|||+|++
T Consensus 162 ~~~v~s~~~i~~v~~~~i~~lL~~g~IpV~~Gg~giPi~~~~d~~~g~~~~~d~D~~Aa~lA~~l~Ad~li~lTdVdGvy 241 (314)
T 1e19_A 162 RRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAA 241 (314)
T ss_dssp EEEECCCCEEEETTHHHHHHHHHTTCEEECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEEEEESSSSCE
T ss_pred cccccCcccceeehHHHHHHHHHCCCEEEEeCCCccCeEECCCCcceeEEeccHHHHHHHHHHHcCCCEEEEeccCCEEE
Confidence 8889999999999999999998 8887776 5667899999999999999999999999999873
Q ss_pred -----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCcc
Q 013702 128 -----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGF 202 (438)
Q Consensus 128 -----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (438)
+++++|++++.+|+++++..+. +
T Consensus 242 ~~~p~~~a~~i~~i~~~e~~~~~~~g~----------------------------------------------------~ 269 (314)
T 1e19_A 242 LYYGTEKEQWLREVKVEELRKYYEEGH----------------------------------------------------F 269 (314)
T ss_dssp ETTTSTTCEECCEEEHHHHHHHHHTTC----------------------------------------------------S
T ss_pred CCCCCCCCeECCEECHHHHHHHHhCCC----------------------------------------------------c
Confidence 3589999999999999975532 1
Q ss_pred CCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 203 DNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 203 ~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
.+| | |.+||++|+.+|+.|+.++||+++. .+.++|++ +.||+|.
T Consensus 270 ~~G-g---------------------M~~Kv~aa~~~~~~~~~~v~I~~~~----~l~~~~~g-~~GT~i~ 313 (314)
T 1e19_A 270 KAG-S---------------------MGPKVLAAIRFIEWGGERAIIAHLE----KAVEALEG-KTGTQVL 313 (314)
T ss_dssp CTT-T---------------------HHHHHHHHHHHHHHTCSEEEEEEGG----GHHHHHTT-SSSEEEE
T ss_pred CCC-C---------------------hHHHHHHHHHHHHhCCCeEEEecHH----HHHHHHcC-CCCeEEc
Confidence 133 3 9999999999999999999999852 26788886 6899985
|
| >2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-23 Score=206.59 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=114.3
Q ss_pred eEeeeCHHHHHHHhcCCceEEEc-----Cc-ccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-----CCCcc
Q 013702 64 EVKKVDVTRMRERLDGGCLVILS-----NL-GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHL 132 (438)
Q Consensus 64 ~v~~v~~~~i~~ll~~g~IPVi~-----~i-~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-----~~~~~ 132 (438)
+|+.++.+.|+.||++|+|||++ |+ +.+..|+.+|+|+|++|+++|.+|+||+|+|+|||+|++ +++++
T Consensus 166 ~i~~v~~~~i~~lL~~g~IpIi~Gg~Gipv~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~dp~~~~a~~ 245 (310)
T 2we5_A 166 PIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQ 245 (310)
T ss_dssp EEEETTHHHHHHHHHTTCEEECCGGGCEEEETTTTEECCCCCCHHHHHHHHHHHTTCSEEEEECSCSSCEESTTSTTCEE
T ss_pred cceeehHHHHHHHHHCCCEEEEECCCCCCCcCCCCCCcEeecCHHHHHHHHHHHcCCCEEEEEeCchHhhCCCCCCCCeE
Confidence 67789999999999999999999 77 666779999999999999999999999999999999873 36899
Q ss_pred cccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccc
Q 013702 133 IRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 212 (438)
Q Consensus 133 i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 212 (438)
|++++.+|+++++..+. +.+| |
T Consensus 246 i~~i~~~e~~~~~~~g~----------------------------------------------------~~~G-g----- 267 (310)
T 2we5_A 246 LTNVTVAELEEYKQAGH----------------------------------------------------FAPG-S----- 267 (310)
T ss_dssp CCEEEHHHHHHHHHTTC----------------------------------------------------SCTT-T-----
T ss_pred CCEEcHHHHHHHhhCCC----------------------------------------------------CCCC-C-----
Confidence 99999999999875532 1123 3
Q ss_pred ccccccccchhhhcccchHHHHHHHHHHHcCCC-eEEeeccccCceeeeehhhcCCCccccc
Q 013702 213 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQ-RVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~-~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|.+||++|..|+++|++ ++||++ ++. +.++|++++.||+|.
T Consensus 268 ----------------M~~Kv~aa~~a~~~gv~~~v~I~~---~~~-l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 268 ----------------MLPKIEAAIQFVESQPNKQAIITS---LEN-LGSMSGDEIVGTVVT 309 (310)
T ss_dssp ----------------THHHHHHHHHHHHHSTTCEEEEEC---SGG-GGGCBTTBCCSEEEE
T ss_pred ----------------hHHHHHHHHHHHHcCCCceEEECc---HHH-HHHHHcCCCCCeEEe
Confidence 99999999999999994 999997 333 678999989999985
|
| >3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.2e-22 Score=193.24 Aligned_cols=164 Identities=16% Similarity=0.199 Sum_probs=131.7
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcC-cccCCCCCeeecCh
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEVLNCNT 101 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~-i~~~~~g~~~nina 101 (438)
.|+++|.+ ++++++.++++ + . | | ++.++.+.|+.||++|.|||+++ ++.+++|+++|+|+
T Consensus 109 ~l~~~G~~----a~~l~~~~~~~-t--~-------d----g-~~~~~~~~i~~lL~~g~IpVi~gd~~~~~~g~~~~~~~ 169 (286)
T 3d40_A 109 KLRGIGVD----AFPLQLAAMCT-L--R-------N----G-IPQLRSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSS 169 (286)
T ss_dssp HHHHTTCC----EEECCGGGTEE-E--E-------T----T-EEEECCSHHHHHHHTTCEEEEECEEEEBTTSCEEEECG
T ss_pred HHHHcCCc----EEEEEeecCCc-c--c-------C----C-eEEehHHHHHHHHHCcCEEEEcCCeEEcCCCCEEeeCH
Confidence 45566664 89999999986 2 1 1 3 78899999999999999999998 78889999999999
Q ss_pred HHHHHHHHHH-cCCCEEEEEecCcccc-C---CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCC
Q 013702 102 YEVATACALA-IEADKLICIIDGPILD-E---SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSI 176 (438)
Q Consensus 102 D~~A~~lA~a-L~A~~li~ltdv~g~~-~---~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (438)
|++|+.+|.+ |+||+|+|+|||+|+. . ++++|++|+..|++++++.-..
T Consensus 170 D~~Aa~lA~~~l~Ad~LiilTDVdGVy~~dP~~a~~i~~is~~e~~~l~~~~~~-------------------------- 223 (286)
T 3d40_A 170 DRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAGGDTILPEVDARSPEQAYAALWG-------------------------- 223 (286)
T ss_dssp GGHHHHTTTTCCSCEEEEEEESSSSCEECC---CEECCEEETTSCHHHHHHHHH--------------------------
T ss_pred HHHHHHHHHhhCCCCEEEEecCCCeeEcCCCCCCcCCcccCHHHHHHHHHhhcc--------------------------
Confidence 9999999999 9999999999999884 3 3899999999887777542100
Q ss_pred ccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCc
Q 013702 177 GSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGG 256 (438)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~ 256 (438)
.++. |.+|+ |.+||++|..|+++|++ +||+|++.|+
T Consensus 224 ---------------------~~~~-------------~~tgg---------M~~Kl~Aa~~a~~~gv~-v~I~~g~~p~ 259 (286)
T 3d40_A 224 ---------------------SSEW-------------DATGA---------MHTKLDALVTCARRGAE-CFIMRGDPGS 259 (286)
T ss_dssp ---------------------SCC-----------------CH---------HHHHHHHHHHHHHTTCE-EEEEECCTTC
T ss_pred ---------------------ccCC-------------cccCc---------HHHHHHHHHHHHHCCCc-EEEEeCCCCC
Confidence 0011 22223 99999999999999997 9999999999
Q ss_pred eeeeehhhc-----CCC-cccccCCc
Q 013702 257 VLLLELFKR-----DGM-GTMVASDL 276 (438)
Q Consensus 257 ~ll~el~~~-----~g~-GT~i~~d~ 276 (438)
.+ .++|++ +.+ ||.|..+.
T Consensus 260 ~l-~~l~t~~~~~~~~~~~t~i~~~~ 284 (286)
T 3d40_A 260 DL-EFLTAPFSSWPAHVRSTRITTTA 284 (286)
T ss_dssp CC-GGGGSCGGGSCTTCCCEEEEC--
T ss_pred cH-HHHhcCcccCcccccceeeeecc
Confidence 76 899998 665 99987653
|
| >3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-21 Score=186.60 Aligned_cols=153 Identities=13% Similarity=0.112 Sum_probs=115.2
Q ss_pred CCcc-cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcC-cccCCCCCe
Q 013702 19 PPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSGEV 96 (438)
Q Consensus 19 ~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~-i~~~~~g~~ 96 (438)
..++ .|+++|.+ ++++++.|.+ ++|++ +.+.|+.||++|.|||++| .+.+.+++.
T Consensus 86 ~~~v~~l~~~G~~----a~~l~~~~~~----------------~~g~v---~~~~i~~ll~~g~ipVi~~~~~~~~~~~~ 142 (249)
T 3ll5_A 86 LMVIDAMIEMGMR----PISVPISALR----------------YDGRF---DYTPLIRYIDAGFVPVSYGDVYIKDEHSY 142 (249)
T ss_dssp HHHHHHHHHTTCC----EEECCGGGSC----------------BSSSB---CCHHHHHHHHTTCEEEEECEEEEEETTEE
T ss_pred HHHHHHHHHCCCc----EEEEcHHHcc----------------cccEE---cHHHHHHHHHCCCEEEECCCEEEcCCCce
Confidence 3444 67777875 9999888764 36666 9999999999999999998 355567889
Q ss_pred eecChHHHHHHHHHHcCCCEEEEEecCccccC-C------CcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccc
Q 013702 97 LNCNTYEVATACALAIEADKLICIIDGPILDE-S------GHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITC 169 (438)
Q Consensus 97 ~ninaD~~A~~lA~aL~A~~li~ltdv~g~~~-~------~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 169 (438)
+|+|+|++|+.+|.+|+||+|+|+|||+|++. + .++|++++. ++......
T Consensus 143 ~~~~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~~-~~~~~~~~---------------------- 199 (249)
T 3ll5_A 143 GIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDT-NITFDRVQ---------------------- 199 (249)
T ss_dssp EEECHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCCEECC-CC----------------------------
T ss_pred eeecHHHHHHHHHHhcCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHHH-HHhcccCC----------------------
Confidence 99999999999999999999999999998742 2 467777731 11111100
Q ss_pred cCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHH-HHcCCCeEE
Q 013702 170 FGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFV-CRRGVQRVH 248 (438)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gv~~~~ 248 (438)
.+.+|| |.+||++|..| +++|+ ++|
T Consensus 200 --------------------------------------------~~~tGg---------M~~Kl~aA~~a~~~~Gv-~v~ 225 (249)
T 3ll5_A 200 --------------------------------------------NDVTGG---------IGKKFESMVKMKSSVKN-GVY 225 (249)
T ss_dssp ------------------------------------------------------------HHHHHHHHHHHTTCTT-CEE
T ss_pred --------------------------------------------CeeECC---------HHHHHHHHHHHHHhcCC-EEE
Confidence 012223 99999999999 88999 799
Q ss_pred eeccccCceeeeehhhcCCC-ccccc
Q 013702 249 LLDGTIGGVLLLELFKRDGM-GTMVA 273 (438)
Q Consensus 249 i~~g~~~~~ll~el~~~~g~-GT~i~ 273 (438)
|+|++.+++++. + .+++. ||.|.
T Consensus 226 I~~g~~~~~l~~-l-~g~~~~GT~i~ 249 (249)
T 3ll5_A 226 LINGNHPERIGD-I-GKESFIGTVIR 249 (249)
T ss_dssp EEETTSGGGGGG-T-TSTTCCSEEEC
T ss_pred EEeCCChhHHHH-h-CCCCCCCEEeC
Confidence 999999998877 5 45777 99873
|
| >3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-20 Score=183.69 Aligned_cols=132 Identities=16% Similarity=0.125 Sum_probs=109.5
Q ss_pred EeeeCHHHHHHHhcCCceEEEc-----CcccC---CCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-----CCCc
Q 013702 65 VKKVDVTRMRERLDGGCLVILS-----NLGYS---SSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-----ESGH 131 (438)
Q Consensus 65 v~~v~~~~i~~ll~~g~IPVi~-----~i~~~---~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-----~~~~ 131 (438)
+..||.+.|+.||++|.|||++ |+..+ .+|..+|+|+|++|+.+|.+|+||+|+|||||+|+. ++++
T Consensus 173 ~~iVe~~~I~~LL~~G~IvI~aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~LIiLTDVdGVy~dp~~p~a~ 252 (317)
T 3kzf_A 173 LEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACINYKKPDER 252 (317)
T ss_dssp EEETTHHHHHHHHHTTCEEECCGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCEEECCSSSSCEESSSCSSCE
T ss_pred cceECHHHHHHHHHCCCEEEEeCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEEEEecCCCeeeCCCCCCCCe
Confidence 3568999999999999999998 77654 236778999999999999999999999999999873 5689
Q ss_pred ccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccc
Q 013702 132 LIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSS 211 (438)
Q Consensus 132 ~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 211 (438)
+|++++.+|+++++.++. +.+| |
T Consensus 253 ~I~~it~~e~~~li~~g~----------------------------------------------------~~~G-G---- 275 (317)
T 3kzf_A 253 KLEEIKLSEILALEKDGH----------------------------------------------------FAAG-S---- 275 (317)
T ss_dssp ECCEEEHHHHHHHHTTTS----------------------------------------------------CC---C----
T ss_pred ECcCcCHHHHHHHHhcCC----------------------------------------------------CCCC-C----
Confidence 999999999999875432 1123 3
Q ss_pred cccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCC
Q 013702 212 EQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 275 (438)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d 275 (438)
|.+||++|+.||++|+.++||+++.. +.++|+++ .||.|.+|
T Consensus 276 -----------------M~pKl~AA~~av~~gg~~v~I~s~~~----l~~~l~G~-~GT~I~~d 317 (317)
T 3kzf_A 276 -----------------MGPKVRAAIEFTQATGKMSIITSLST----AVDALNGK-CGTRIIKD 317 (317)
T ss_dssp -----------------CHHHHHHHHHHHHHHCCCEEECCGGG----HHHHHTTS-SSEEEECC
T ss_pred -----------------HHHHHHHHHHHHHcCCCeEEEcchHH----HHHHHCCC-CCeEEecC
Confidence 99999999999999999999999753 34777766 79998764
|
| >2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.6e-21 Score=181.78 Aligned_cols=136 Identities=16% Similarity=0.128 Sum_probs=109.8
Q ss_pred eeeeEeeeCH-HHHHHHhcCCceEEEc---CcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CC
Q 013702 61 ATGEVKKVDV-TRMRERLDGGCLVILS---NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ES 129 (438)
Q Consensus 61 ~vG~v~~v~~-~~i~~ll~~g~IPVi~---~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~ 129 (438)
++|+++.+|. +.|+.||+.|.|||++ |++. ++.+|+|+|++|+.+|.+|+||+|+|+|||+|++ ++
T Consensus 101 ~~~~~~~~~~~~~i~~ll~~g~ipVi~~~d~v~~---~~~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~ 177 (251)
T 2ako_A 101 FDSRKATKHAKNAIDMMINLGILPIINENDATAI---EEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSD 177 (251)
T ss_dssp GGCHHHHHHHHHHHHHHHHTTCEEEEEECTTTCC---HHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTT
T ss_pred hcCcceEehHHHHHHHHHHCCCEEEEeCCCceee---cceeecCchHHHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCC
Confidence 4777778887 9999999999999999 5554 3347999999999999999999999999999873 45
Q ss_pred CcccccCCHH--HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCC
Q 013702 130 GHLIRFLTLQ--EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNG 207 (438)
Q Consensus 130 ~~~i~~l~~~--e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g 207 (438)
+++|++++.+ |+.+++.... +.+.+|
T Consensus 178 a~~i~~i~~~~~e~~~~~~~~~--------------------------------------------------~~~~~g-- 205 (251)
T 2ako_A 178 AKRLEKITHIKEEWLQATIKTG--------------------------------------------------SEHGTG-- 205 (251)
T ss_dssp CCBCCEESCCCGGGC-----------------------------------------------------------CBSC--
T ss_pred CeEeeEeccchHHHHHHhcccC--------------------------------------------------CCCccC--
Confidence 8999999998 8877754210 011123
Q ss_pred CccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeee--hhhcCCCccccc
Q 013702 208 LWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLE--LFKRDGMGTMVA 273 (438)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~e--l~~~~g~GT~i~ 273 (438)
| |.+|+++|..|+++|++ +||+|++.|+.+ .+ +|++++.||+|.
T Consensus 206 -----------g---------m~~k~~aa~~a~~~gv~-v~I~~g~~~~~l-~~~~~~~g~~~GT~i~ 251 (251)
T 2ako_A 206 -----------G---------IVTKLKAAKFLLEHNKK-MFLASGFDLSVA-KTFLLEDKQIGGTLFE 251 (251)
T ss_dssp -----------H---------HHHHHHHHHHHHHTTCE-EEEEESSSCHHH-HHHHHSCCCCSSEEEC
T ss_pred -----------c---------hHHHHHHHHHHHHCCCe-EEEEeCCChhhh-hhhHHhcCCCCceEeC
Confidence 3 99999999999999997 999999999986 77 899989999874
|
| >2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-19 Score=182.89 Aligned_cols=142 Identities=19% Similarity=0.308 Sum_probs=97.7
Q ss_pred eeeeEeeeCH-HHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcc
Q 013702 61 ATGEVKKVDV-TRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHL 132 (438)
Q Consensus 61 ~vG~v~~v~~-~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~ 132 (438)
++++++.+|. +.|+.||+.|.|||+++.+....+++.|+|+|++|+.+|.+|+||+|+|+|||+|++ |++++
T Consensus 108 ~~~~~r~~n~~~~i~~LL~~g~IPIv~end~v~~~el~~gd~D~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~ 187 (367)
T 2j5v_A 108 MEDRERFLNARDTLRALLDNNVVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAEL 187 (367)
T ss_dssp GSSHHHHHHHHHHHHHHHHTTCEEEEEECTTSCCGGGCCCSHHHHHHHHHHHHTCSEEEEEECC----------------
T ss_pred ccCceEEEhHHHHHHHHHHCCCEEEECCCCceecccccCCCHHHHHHHHHHhcCCCEEEEeecCCceECCCCCCCCCCeE
Confidence 4667777887 999999999999999966544456688999999999999999999999999999873 25899
Q ss_pred cccCCH--HHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcc
Q 013702 133 IRFLTL--QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWS 210 (438)
Q Consensus 133 i~~l~~--~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 210 (438)
|++++. +|+++++... ++++++| |
T Consensus 188 I~~i~~~~~e~~~l~~~~--------------------------------------------------~s~~gtG-g--- 213 (367)
T 2j5v_A 188 IKDVYGIDDALRAIAGDS--------------------------------------------------VSGLGTG-G--- 213 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeeCCCHHHHHHHhhcc--------------------------------------------------CCCcCcC-c---
Confidence 999999 7888775431 1112244 3
Q ss_pred ccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCCc
Q 013702 211 SEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDL 276 (438)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~ 276 (438)
|.+||++|..|+++|++ +||++++.|+.| .++|++++.||.|.++.
T Consensus 214 ------------------M~~Kl~Aa~~a~~~Gv~-v~I~~g~~~~~L-~~~l~g~~~GT~i~~~~ 259 (367)
T 2j5v_A 214 ------------------MSTKLQAADVACRAGID-TIIAAGSKPGVI-GDVMEGISVGTLFHAQA 259 (367)
T ss_dssp ------------------CHHHHHHHHHHHHTTCE-EEEEETTSTTHH-HHHHHTCCCSEEECCCS
T ss_pred ------------------cHHHHHHHHHHHHcCCC-EEEEcCCCchHH-HHHhcCCCCcEEEEcCc
Confidence 99999999999999997 999999999975 88999999999998743
|
| >4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans} | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-18 Score=171.20 Aligned_cols=138 Identities=15% Similarity=0.207 Sum_probs=109.5
Q ss_pred cceeeeEeeeCHHHHHHHhcCCceEEEcCc--------ccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc---
Q 013702 59 YGATGEVKKVDVTRMRERLDGGCLVILSNL--------GYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD--- 127 (438)
Q Consensus 59 ~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i--------~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~--- 127 (438)
.+.++.+..++.+.|..|+++|+|||+++. +.+.+|..+|+|+|++|+.||.+|+||+|||||||+|++
T Consensus 182 V~sp~p~~ive~~~I~~L~~~g~Ivi~~ggggipv~~~~~~~~G~~~vid~D~~Aa~lA~~l~Ad~LiiLTdV~gv~~~~ 261 (332)
T 4axs_A 182 VASPIPVDFIGIDAIKQNVNNGCVCIVGGGGGIPTIIQDNQYIGVDGVIDKDFALAKIADAVNADIFVVLTAVDYVYVDF 261 (332)
T ss_dssp ECCCCEEEETTHHHHHHHHHTTCEEECCGGGCEEEEESSSCEEECSSCCCHHHHHHHHHHHTTCSEEEEECSCSSCEEST
T ss_pred CCCCCCceeecHHHHHHhhcCCeEEEecccCCCCccccCCcccCceeeechHHHHHHHHHHhCCceEEEEecCCceEcCC
Confidence 455666777999999999999999886432 223357889999999999999999999999999999873
Q ss_pred --CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCC
Q 013702 128 --ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNG 205 (438)
Q Consensus 128 --~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 205 (438)
++.++|+++|.+|+++++++|.
T Consensus 262 ~~~~~~~i~~it~~e~~~~~~~g~-------------------------------------------------------- 285 (332)
T 4axs_A 262 NKPTQKALKTVDVKALNNFINQDQ-------------------------------------------------------- 285 (332)
T ss_dssp TSTTCEECSSCBHHHHHHHHHTTC--------------------------------------------------------
T ss_pred CCcchhhcccCCHHHHHHHHHCCC--------------------------------------------------------
Confidence 4467999999999999987653
Q ss_pred CCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 206 NGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 206 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
|++|| |.|||+||+.|++.|+.+++|+.. .++ +.+++.+ +.||.|.+
T Consensus 286 ---------~~~Gg---------M~pKv~Aa~~~v~~g~g~~~iI~~-~~~--~~~~l~g-~~GT~IvA 332 (332)
T 4axs_A 286 ---------FAKGS---------MLPKIKAAMGFVNGHPNRSAIIAD-LSK--VEDALKG-LSGTKIIA 332 (332)
T ss_dssp ---------SCTTT---------THHHHHHHHHHHTTCTTCEEEEEC-STT--HHHHTTT-SSSEEEBC
T ss_pred ---------cCcCC---------cHHHHHHHHHHHHhCCCcEEEECC-HHH--HHHHHCC-CCCcEEeC
Confidence 22333 999999999999999988888743 232 3456655 47999864
|
| >4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-18 Score=164.82 Aligned_cols=141 Identities=16% Similarity=0.096 Sum_probs=116.9
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ +++|++.|.+..+ ..+|.+.+..+|++|.|||+++. .|.. ++|+|
T Consensus 93 ~l~~~G~~----av~lt~~d~~~~~------------------~~~~~~~i~~lL~~g~ipVi~~~----~g~~-~~~~D 145 (240)
T 4a7w_A 93 ALEHIGLD----TRVQSAIEIKEIC------------------ESYIYRKAIRHLEKGRVVIFGAG----TGNP-FFTTD 145 (240)
T ss_dssp HHHHTTCC----EEEEESSCCTTTS------------------EECCHHHHHHHHHTTCEEEEEST----TSCT-TSCHH
T ss_pred HHHHCCCC----EEEecHHHcCccc------------------CcCcHHHHHHHHHCCCEEEEeCC----CCCC-CCChH
Confidence 78888886 9999998876311 23589999999999999999982 2333 69999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCC
Q 013702 103 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 175 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (438)
++|+.+|.+|+||+|+|+|||+|++ |++++|++++.+|+.++ +.
T Consensus 146 ~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~-------------------------- 196 (240)
T 4a7w_A 146 TAATLRAIEIGSDLIIKATKVDGIYDKDPNKFKDAKKLDTLSYNDALIG---DI-------------------------- 196 (240)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEECHHHHHHS---SC--------------------------
T ss_pred HHHHHHHHHcCCCEEEEccCCCceECCCCCCCCCCeEcceecHHHHHhc---Cc--------------------------
Confidence 9999999999999999999999873 34789999999876542 21
Q ss_pred CccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 013702 176 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 255 (438)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~ 255 (438)
+ + | ++.+|..|+++|++ +||+|++.|
T Consensus 197 -----------------------------~-~---------------------m--~~~a~~~a~~~gv~-v~I~~g~~~ 222 (240)
T 4a7w_A 197 -----------------------------E-V---------------------M--DDTAISLAKDNKLP-IVVCNMFKK 222 (240)
T ss_dssp -----------------------------C-S---------------------S--CHHHHHHHHHTTCC-EEEEESSST
T ss_pred -----------------------------c-c---------------------c--HHHHHHHHHHCCCe-EEEECCCCc
Confidence 1 2 5 57899999999996 999999999
Q ss_pred ceeeeehhhcCCCccccc
Q 013702 256 GVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 256 ~~ll~el~~~~g~GT~i~ 273 (438)
++++.+++++++.||+|.
T Consensus 223 ~~l~~~l~g~~g~GT~i~ 240 (240)
T 4a7w_A 223 GNLLQVIKHQQGVFSMVK 240 (240)
T ss_dssp THHHHHHHHSCSSCEEEC
T ss_pred cHHHHHHCCCCCCceeeC
Confidence 999999999999999974
|
| >2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-18 Score=163.40 Aligned_cols=124 Identities=16% Similarity=0.173 Sum_probs=104.2
Q ss_pred eeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHH
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ 139 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~ 139 (438)
.++.+.|+.+|+.|.|||++| + ..|+|+|++|+.+|.+|+||+|+|+|||+|+. +++++|++++.+
T Consensus 92 ~~~~~~i~~ll~~g~ipVi~g-g------~~~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~ 164 (226)
T 2j4j_A 92 PQSLEEFIQDWSHGKVVVTGG-F------QPGQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQ 164 (226)
T ss_dssp CSSHHHHHHHHTTSSBEEECC-C------STTSCHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHH
T ss_pred cCCHHHHHHHHHCCCEEEEcC-C------CCCCCcHHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCHH
Confidence 468899999999999999999 2 23899999999999999999999999999873 358999999999
Q ss_pred HHHHHHHh-hhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccccccc
Q 013702 140 EADSLIRQ-RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIG 218 (438)
Q Consensus 140 e~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~ 218 (438)
|+.+++.. +. .+| |
T Consensus 165 e~~~l~~~~~~-----------------------------------------------------~~g-g----------- 179 (226)
T 2j4j_A 165 DLRKILEGSQS-----------------------------------------------------VQA-G----------- 179 (226)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred HHHHHhhcCCC-----------------------------------------------------CcC-C-----------
Confidence 99888643 21 122 3
Q ss_pred ccchhhhcccc--hHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 219 GQERLSRLNGY--LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 219 ~~~~~~~~~~~--~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
| .+|+.+|..|++.|++ +||+|++.|+.+ .++|++++.||.|.+
T Consensus 180 ----------m~~~~k~~a~~~a~~~gi~-v~I~~~~~~~~l-~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 180 ----------TYELLDPLAIKIVERSKIR-VIVMNYRKLNRI-IDILKGEEVSSIIEP 225 (226)
T ss_dssp ------------CCSCHHHHHHHHHTTCE-EEEEEGGGGGGH-HHHHTTCSSCEEEEC
T ss_pred ----------ccccchHHHHHHHHHCCCe-EEEEeCCChhHH-HHHHcCCCCceEEee
Confidence 6 8899999999999997 999999999976 789999999999864
|
| >3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-18 Score=175.71 Aligned_cols=113 Identities=22% Similarity=0.262 Sum_probs=74.9
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc-ccCCC-CCeeec-
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL-GYSSS-GEVLNC- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~-g~~~ni- 99 (438)
.|+++|.+ ++++++.+.+++++.+.+ .|+|..++++.|+.+|+.|.|||++|+ |.+++ |++.++
T Consensus 84 ~L~~~G~~----a~~l~~~~~~~~t~~~~~---------~~~v~~~~~~~i~~~l~~g~ipVv~g~~g~~~~~g~~~tlg 150 (421)
T 3ab4_A 84 AIESLGAE----AQSFTGSQAGVLTTERHG---------NARIVDVTPGRVREALDEGKICIVAGFQGVNKETRDVTTLG 150 (421)
T ss_dssp HHHHTTCC----EEECCCC--------------------------CCHHHHHHHHHTTCEEEC-----------------
T ss_pred HHHHCCCC----eEEEehhhceEEeccCCC---------CeeechhhHHHHHHHHhCCCEEEEeCCcCcCCCCCceEEeC
Confidence 66777775 999999999999887642 489999999999999999999999998 88999 999999
Q ss_pred --ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 100 --NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 --naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
++|++|+.+|.+|+||+|+|+|||+|+. +++++|++|+++|+.+|...|
T Consensus 151 rg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~G 208 (421)
T 3ab4_A 151 RGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVG 208 (421)
T ss_dssp -CCHHHHHHHHHHHHTCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHCCCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhcC
Confidence 9999999999999999999999999873 368999999999999997554
|
| >1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=143.10 Aligned_cols=126 Identities=16% Similarity=0.179 Sum_probs=100.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCH-------------HHHHhhc----CcEEEEEECCEEEEEEEEeeecC
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-------------EELLKAL----DSFYVVEREGQIIACAALFPFFK 339 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~-------------e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~ 339 (438)
.+.||+++++|++.|.++....+...+....+. +.+...+ ..+++++.++++|||+.+.....
T Consensus 2 ~~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~va~~~~~ivG~~~~~~~~~ 81 (180)
T 1tiq_A 2 SVKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDA 81 (180)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGG
T ss_pred ceEEEECCHHhHHHHHHHHHHHHHHHccccCCHHHHHHHHHHhCCHHHHHHHHcCCCceEEEEEECCEEEEEEEEEeCCC
Confidence 367999999999999999877654433222222 2222222 24688889999999999885432
Q ss_pred ------CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 340 ------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 340 ------~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
...++|..++|+|+|||||||++||+.++++|++.|++.+.+.+ .+|++||+|+||+.++...
T Consensus 82 ~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~g~~~ 154 (180)
T 1tiq_A 82 QSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHS 154 (180)
T ss_dssp SSSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred cccccCCCcEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEehhcCHHHHHHHHHcCCEEcCcEE
Confidence 35889999999999999999999999999999999999999888 5899999999999998653
|
| >3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.72 E-value=9.2e-17 Score=144.37 Aligned_cols=146 Identities=18% Similarity=0.206 Sum_probs=116.4
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHH-----cCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVE-----SGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAA 347 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~-----~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~ 347 (438)
+.+.||+++++|++.+.+++..... .....+++.+.+..++ ..+++++.++++||++.+.+......++|..
T Consensus 23 m~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~~~i~~ 102 (182)
T 3kkw_A 23 MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGN 102 (182)
T ss_dssp CCCEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEE
T ss_pred ccEEEEeCCHHHHHHHHHHHHhHHHHhhhccccCCCCCHHHHHHHhcCCccEEEEEeCCeEEEEEEEEeecCCceEEEEE
Confidence 4478999999999999999876522 2223466777777665 4578899999999999998776677899999
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEE
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 422 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k 422 (438)
++|+|+|||+|||++|++.+++++++. +++.+.+.+ ..+.+||+|+||+..+...-. ..+....+.++|+
T Consensus 103 l~V~p~~rg~Gig~~Ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~-----~~~g~~~~~~~m~ 177 (182)
T 3kkw_A 103 MMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERH-----DPDGRRVALIQMD 177 (182)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE-----CTTSCEEEEEEEE
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHCCCeEecccccc-----ccCCcEEeEEEEe
Confidence 999999999999999999999999988 888888877 589999999999998865321 1122334577887
Q ss_pred ccCC
Q 013702 423 KLLP 426 (438)
Q Consensus 423 ~ll~ 426 (438)
|.+.
T Consensus 178 k~L~ 181 (182)
T 3kkw_A 178 KPLE 181 (182)
T ss_dssp EECC
T ss_pred eccC
Confidence 7654
|
| >3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-16 Score=136.35 Aligned_cols=143 Identities=21% Similarity=0.233 Sum_probs=105.0
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcC--cCCcC-CHHHHHhhc----CcEEEEEE-CCEEEEEEEEeeecCCCeEEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESG--ALVRR-TDEELLKAL----DSFYVVER-EGQIIACAALFPFFKEKCGEVAA 347 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~--~~~~~-~~e~l~~~~----~~~~V~~~-dg~iVG~~~l~~~~~~~~~~I~~ 347 (438)
+++.||+++++| +.+..++....... ..... ........+ ..+++++. ++++||++.+... ....++|..
T Consensus 2 ~~~~ir~~~~~D-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~-~~~~~~i~~ 79 (162)
T 3lod_A 2 AMYTITDIAPTD-AEFIALIAALDAWQETLYPAESNHLLDLSQLPPQTVIALAIRSPQGEAVGCGAIVLS-EEGFGEMKR 79 (162)
T ss_dssp CCCEEEECCTTS-HHHHHHHHHHHHHTTCC---------GGGTSCGGGEEEEEEECSSCCEEEEEEEEEC-TTSEEEEEE
T ss_pred CceEEEECCCCC-HHHHHHHHHHHHhccccCChhHhhhhhHHhCCCCCcEEEEEECCCCCEEEEEEEEEc-CCCeEEEEE
Confidence 567899999999 88888877543221 11111 111111111 35788888 9999999999854 567899999
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEc
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 423 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ 423 (438)
++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+... .|. .....++|.+
T Consensus 80 ~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~~~~~~-------~~~-~~~~~~~m~k 151 (162)
T 3lod_A 80 VYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCAFA-------PYQ-PDPLSVFMEK 151 (162)
T ss_dssp EEECTTSCSSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEECCCT-------TCC-CCSSEEEEEE
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEEccccc-------ccC-CCCccEEEEE
Confidence 999999999999999999999999999999999887 4699999999999988642 122 2334677777
Q ss_pred cCCCC
Q 013702 424 LLPDT 428 (438)
Q Consensus 424 ll~~~ 428 (438)
.++..
T Consensus 152 ~l~~~ 156 (162)
T 3lod_A 152 PLFAD 156 (162)
T ss_dssp ECC--
T ss_pred ecCCC
Confidence 76643
|
| >2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=141.79 Aligned_cols=137 Identities=16% Similarity=0.190 Sum_probs=105.0
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeecC----------CCe
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK----------EKC 342 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~----------~~~ 342 (438)
.+.||+++++|++.+.++....+... ++.+.+...+ ..+++++.++++||++.+....+ ...
T Consensus 12 ~~~iR~~~~~D~~~i~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~ 87 (168)
T 2x7b_A 12 DFTLRNARMDDIDQIIKINRLTLPEN----YPYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRK 87 (168)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHCSCC----CCHHHHHHHHHHHGGGCEEEEETTEEEEEEEEEEEEEECSSCSSCCEEEE
T ss_pred cEEEEeCCHHHHHHHHHHHHHHCCCC----ccHHHHHHHHhcCCceEEEEEECCeEEEEEEEEEeccccccccccCCCcE
Confidence 46799999999999999976554332 3333333222 45778888999999998875322 136
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCc
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 417 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s 417 (438)
++|..++|+|+|||||||++|++.+++++++. |++.+.+.+ .++++||+|+||+..+... ..| .+..+
T Consensus 88 ~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~~~------~~~-~~g~~ 160 (168)
T 2x7b_A 88 GHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKVKVLK------GYY-ADGED 160 (168)
T ss_dssp EEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCEEEEEET------TCS-TTSCC
T ss_pred EEEEEEEECHHHhccCHHHHHHHHHHHHHHHhcCeeEEEEEEEeCCHHHHHHHHHCCCEEEEEee------ccc-CCCCc
Confidence 78999999999999999999999999999998 999999887 5899999999999987652 112 22346
Q ss_pred eEEEEcc
Q 013702 418 KYYMKKL 424 (438)
Q Consensus 418 ~~~~k~l 424 (438)
.++|.+.
T Consensus 161 ~~~m~~~ 167 (168)
T 2x7b_A 161 AYLMARP 167 (168)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7777653
|
| >3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.6e-16 Score=134.43 Aligned_cols=146 Identities=14% Similarity=0.209 Sum_probs=110.9
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHH------HHHhhc----CcEEEEEECCE-EEEEEEEeeecCCCeEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE------ELLKAL----DSFYVVEREGQ-IIACAALFPFFKEKCGE 344 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e------~l~~~~----~~~~V~~~dg~-iVG~~~l~~~~~~~~~~ 344 (438)
+.+.||+++++|.+.+.+++.......+...++.+ .+...+ ..++++..+++ +||++.+.+. ....++
T Consensus 2 m~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~-~~~~~~ 80 (163)
T 3d8p_A 2 MAINIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIVGTIGLIRL-DNNMSA 80 (163)
T ss_dssp -CCEEEECCGGGHHHHHHHHHHHHHTTSCCSCCGGGCGGGGCHHHHTTTTTCEEEEEECTTCCEEEEEEEEEC-STTEEE
T ss_pred ceEEEEECCHHHHHHHHHHHHHHHHHhhCCCCccccchHHHHHHHHHhcCCceEEEEEeCCCeEEEEEEEEec-CCCEEE
Confidence 34689999999999999999887765554333221 233222 45778888888 9999998753 457889
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEE
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 420 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~ 420 (438)
+..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+....+. .|.....+..+
T Consensus 81 i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~~~~----~~~~~~~~~~~ 156 (163)
T 3d8p_A 81 LKKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLPS----SFPKLDVDNRF 156 (163)
T ss_dssp EEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTCEEECGGGSCT----TSCCCC--CEE
T ss_pred EEEEEEChhhccCCHHHHHHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHHCCCEEeeeccchh----hccccccceee
Confidence 999999999999999999999999999999999999987 4789999999999998765553 22223334455
Q ss_pred EEccCC
Q 013702 421 MKKLLP 426 (438)
Q Consensus 421 ~k~ll~ 426 (438)
+.+.++
T Consensus 157 ~~~~l~ 162 (163)
T 3d8p_A 157 YYRNLK 162 (163)
T ss_dssp EEEECC
T ss_pred eehhcc
Confidence 555444
|
| >2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.71 E-value=6.7e-16 Score=133.55 Aligned_cols=142 Identities=20% Similarity=0.230 Sum_probs=112.8
Q ss_pred eEEEECCccCHHHHHHHHHHHHHc-------Cc-CCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCCCeEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVES-------GA-LVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAA 347 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~-------~~-~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~ 347 (438)
+.||+++++|++.+.+++...... .+ ....+.+.+...+ ..++++..++++||++.+.........++..
T Consensus 1 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~ 80 (162)
T 2fia_A 1 MKIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKR 80 (162)
T ss_dssp CCEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEE
T ss_pred CcchhCCHhhHHHHHHHHHHHHHHHhccCcccCCCCCCCHHHHHHHHHhCcEEEEEECCEEEEEEEEeeCCCCCceEEEE
Confidence 358999999999999999875432 11 1223455665554 5688888999999999998665546788999
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCC-CCceEEEE
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLS-RNSKYYMK 422 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~-r~s~~~~k 422 (438)
++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+....+ +.. ..+.++|.
T Consensus 81 ~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~-------~~~~~~~~~~m~ 153 (162)
T 2fia_A 81 FATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESLQM-------NRLDFGSFYLYV 153 (162)
T ss_dssp EEECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEECCT-------TCGGGCCEEEEE
T ss_pred EEEcccccCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCEEEeeEeec-------cccCccceEEEE
Confidence 999999999999999999999999999999999888 589999999999999876433 122 44667777
Q ss_pred ccCC
Q 013702 423 KLLP 426 (438)
Q Consensus 423 ~ll~ 426 (438)
+.++
T Consensus 154 k~l~ 157 (162)
T 2fia_A 154 KELE 157 (162)
T ss_dssp EECC
T ss_pred EEcC
Confidence 7765
|
| >2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.70 E-value=7.1e-18 Score=158.46 Aligned_cols=124 Identities=19% Similarity=0.098 Sum_probs=100.8
Q ss_pred eeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc---C----CCcccccCCH
Q 013702 66 KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD---E----SGHLIRFLTL 138 (438)
Q Consensus 66 ~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~---~----~~~~i~~l~~ 138 (438)
..+|.+.|+.+|+.|.|||++| |..+| |+|++|+.+|.+|+||+|+|+|||+|+. | ++++|++++.
T Consensus 88 ~~~~~~~i~~ll~~g~ipVi~~------g~~~~-~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~ 160 (219)
T 2ij9_A 88 VPVDFMEAEELSKLYRVVVMGG------TFPGH-TTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSP 160 (219)
T ss_dssp CCSSHHHHHHHHTTCSEEEECC------CSSSS-CTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECH
T ss_pred CcCCHHHHHHHHHCCCEEEEeC------CCCCC-CchHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeCH
Confidence 3578999999999999999999 56677 9999999999999999999999999873 3 5899999999
Q ss_pred HHHHHHHHh-hhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccc
Q 013702 139 QEADSLIRQ-RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAI 217 (438)
Q Consensus 139 ~e~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~ 217 (438)
+|+.+++.. |. . .| |
T Consensus 161 ~e~~~~~~~~g~-----------------------------~------------------------~g-~---------- 176 (219)
T 2ij9_A 161 QQLVEIVSRSSA-----------------------------K------------------------AG-T---------- 176 (219)
T ss_dssp HHHHHHTCC----------------------------------------------------------C-C----------
T ss_pred HHHHHHHhcCCC-----------------------------C------------------------CC-C----------
Confidence 998888543 21 1 22 2
Q ss_pred cccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 218 GGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|.+|..+|..+|+.++.++||+|+ .|+.+ .++|++++.||.|.
T Consensus 177 -----------~~~~~~~a~~~~~~~~~~v~I~~g-~~~~l-~~~~~g~~~GT~i~ 219 (219)
T 2ij9_A 177 -----------NVVIDLLAAKIIERSKIKTYVILG-TPENI-MKAVKGEAVGTVIA 219 (219)
T ss_dssp -----------CCCSCHHHHHHHHHHTCCEEEEEC-CHHHH-HHHHTTCCCSEEEC
T ss_pred -----------ccchHHHHHHHHHHCCCeEEEEEC-CHhHH-HHHHcCCCCCeEeC
Confidence 445555677777766667999999 99876 78999999999874
|
| >2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.70 E-value=7.3e-16 Score=133.11 Aligned_cols=118 Identities=19% Similarity=0.293 Sum_probs=95.2
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcC--CHHHHHhhc----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRR--TDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 350 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~--~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V 350 (438)
.+.||+++++|.+.+.+++... ....++ +.+.+...+ ..+++++.++++||++.+.. +...++|..++|
T Consensus 3 ~~~ir~~~~~D~~~i~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~--~~~~~~i~~l~V 77 (144)
T 2pdo_A 3 AMEIRVFRQEDFEEVITLWERC---DLLRPWNDPEMDIERKMNHDVSLFLVAEVNGEVVGTVMGGY--DGHRGSAYYLGV 77 (144)
T ss_dssp CEEEEECCGGGHHHHHHHHHHT---TCCBTTBCHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEE--CSSCEEEEEEEE
T ss_pred ceEEEECchhhHHHHHHHHhcc---cccCCccchHHHHHHHhhCCCccEEEEEcCCcEEEEEEeec--CCCceEEEEEEE
Confidence 4689999999999999998765 112222 223333322 45888899999999998763 345689999999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEec
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 399 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g 399 (438)
+|+|||||||++|++.+++++++.|+..+.+.+ ..+.+||+|+||+..+
T Consensus 78 ~p~~rg~GiG~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~a~~~Y~k~GF~~~~ 130 (144)
T 2pdo_A 78 HPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERLGYEHAD 130 (144)
T ss_dssp CGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEESSCHHHHHHHHHTTCEECS
T ss_pred CccccCCcHHHHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHHcCCcccc
Confidence 999999999999999999999999999998877 5789999999999864
|
| >4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.1e-16 Score=140.23 Aligned_cols=125 Identities=22% Similarity=0.282 Sum_probs=95.8
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc----CCcCCHHHHHhh-c-------C-cEEEEEECCEEEEEEEEeeecC--CC
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKA-L-------D-SFYVVEREGQIIACAALFPFFK--EK 341 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~-~-------~-~~~V~~~dg~iVG~~~l~~~~~--~~ 341 (438)
.+.||+++++|++.|.+++++...... ..+.+.+..... . . .+++++.||++||++.+.+... ..
T Consensus 8 ~~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dg~ivG~~~~~~~~~~~~~ 87 (173)
T 4h89_A 8 ALQVRDAEDADWPAILPFFREIVSAGETYAYDPELTDEQARSLWMTPSGAPQSRTTVAVDADGTVLGSANMYPNRPGPGA 87 (173)
T ss_dssp TCEEEECCGGGHHHHHHHHHHHHHHCSSCCCCTTCCHHHHHHHHSCCCC-CCCEEEEEECTTCCEEEEEEEEESSSGGGT
T ss_pred ceEEEECCHHHHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhhcCCCceEEEEEEeCCeEEEEEEEEecCCCCCc
Confidence 468999999999999999988655432 233344444332 2 1 2455567899999999986432 23
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-----HHHHHHHHHCCCeEecee
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-----~~a~~fY~k~GF~~~g~~ 401 (438)
...+..++|+|+|||||||++|++.++++|++.|++.+.+.+ +.+++||+|+||+.++..
T Consensus 88 ~~~~~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~~~~~~N~~A~~~y~k~GF~~~G~~ 152 (173)
T 4h89_A 88 HVASASFMVAAAARGRGVGRALCQDMIDWAGREGFRAIQFNAVVETNTVAVKLWQSLGFRVIGTV 152 (173)
T ss_dssp TEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEeeEEEEeeccchHHHHHHHHHHHHHHHCCCcEEEEeeecccCHHHHHHHHHCCCEEEEEE
Confidence 345558999999999999999999999999999999887632 579999999999999853
|
| >1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=6.2e-16 Score=141.07 Aligned_cols=124 Identities=23% Similarity=0.322 Sum_probs=99.0
Q ss_pred EEEECCccCHHHHHHHHHHHHHcC---cCCcCCHHHHHh----hc---------CcEEEEEECCEEEEEEEEeeec----
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLK----AL---------DSFYVVEREGQIIACAALFPFF---- 338 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~---~~~~~~~e~l~~----~~---------~~~~V~~~dg~iVG~~~l~~~~---- 338 (438)
.||+++++|++.|.+++...+... +....+.+.+.. .+ ..++|++.++++||++.+.+..
T Consensus 3 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~ivG~~~~~~~~~~~~ 82 (199)
T 1u6m_A 3 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 82 (199)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred ccccCChHHHHHHHHHHHHHHhhhHHHHhccCCHHHHHHHHHHHHhCCCCccccccEEEEEECCeEEEEEEEecCcHHHH
Confidence 599999999999999998876542 122234433221 11 2478999999999999876421
Q ss_pred --------------------------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHH
Q 013702 339 --------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTAD 388 (438)
Q Consensus 339 --------------------------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~ 388 (438)
....++|..++|+|+|||+|||++||+.++++|++.|++.+.+.| ..+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~ 162 (199)
T 1u6m_A 83 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARK 162 (199)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHH
T ss_pred HHHHHHHHHHHcCccccccceecccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHH
Confidence 224688999999999999999999999999999999999998888 47999
Q ss_pred HHHHCCCeEeceec
Q 013702 389 WFKSRGFRECSIEM 402 (438)
Q Consensus 389 fY~k~GF~~~g~~~ 402 (438)
||+|+||+..+...
T Consensus 163 fY~k~GF~~~~~~~ 176 (199)
T 1u6m_A 163 LYASKGFKDVTTMT 176 (199)
T ss_dssp HHHTTTCEEEEEEE
T ss_pred HHHHCCCEEccEEE
Confidence 99999999988653
|
| >2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-17 Score=159.89 Aligned_cols=125 Identities=16% Similarity=0.080 Sum_probs=101.9
Q ss_pred eeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHH
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ 139 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~ 139 (438)
.++.+.+..||+.|.|||++| |..+| |+|++|+.+|.+|+||+|+|+|||+|++ +++++|++++.+
T Consensus 112 ~~~~~~i~~lL~~g~IpVi~g------g~~~~-~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~ 184 (244)
T 2brx_A 112 VEDFWEAWKAVQLKKIPVMGG------THPGH-TTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPE 184 (244)
T ss_dssp BCSHHHHHHHHHTTCBCEECC------CSTTC-CHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHH
T ss_pred cCCHHHHHHHHhCCCEEEEcC------CCCCC-CchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHH
Confidence 468899999999999999998 45566 9999999999999999999999999873 358999999999
Q ss_pred HHHHHHHh-hhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccccccc
Q 013702 140 EADSLIRQ-RVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIG 218 (438)
Q Consensus 140 e~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~ 218 (438)
|+.+++.. +. + .| |
T Consensus 185 e~~~~~~~~g~-----------------------------~------------------------~g-~----------- 199 (244)
T 2brx_A 185 ELLEIVGKGIE-----------------------------K------------------------AG-S----------- 199 (244)
T ss_dssp HHHHHHHC------------------------------------------------------------------------
T ss_pred HHHHHHhccCC-----------------------------C------------------------CC-C-----------
Confidence 99988755 22 1 12 2
Q ss_pred ccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 219 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
|.+|..+|..+++.++.++||+|++.|+.+ .++|++++.||.|.+
T Consensus 200 ----------m~~~~~~A~~~~~~~~~~v~I~ng~~~~~l-~~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 200 ----------SSVIDPLAAKIIARSGIKTIVIGKEDAKDL-FRVIKGDHNGTTIEP 244 (244)
T ss_dssp -----------CCSCHHHHHHHHHHTCCEEEECHHHHTCH-HHHHTTCSSSEEECC
T ss_pred ----------CcchHHHHHHHHHHCCCeEEEEeCCChhHH-HHHHcCCCCceEecC
Confidence 445566777877776668999999999976 789999899999863
|
| >2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=5.3e-16 Score=134.19 Aligned_cols=145 Identities=19% Similarity=0.198 Sum_probs=112.3
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHc-----CcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVES-----GALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 348 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~-----~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v 348 (438)
.+.||+++++|.+.+.+++...... ....+++.+.+...+ ..++++..++++||++.+.+......++|..+
T Consensus 2 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~i~~~ 81 (160)
T 2i6c_A 2 QLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNM 81 (160)
T ss_dssp CCEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEEE
T ss_pred ceEeccCCHHHHHHHHHHHhhHHHHhccCccccCccCHHHHHHHhccCCceEEEEeCCeEEEEEEEEEEcCCCceEEEEE
Confidence 3689999999999999998764321 112355666666655 34678888999999999987666678999999
Q ss_pred EECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEc
Q 013702 349 GVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 423 (438)
Q Consensus 349 ~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ 423 (438)
+|+|+|||+|+|++|++.+++++++ .|++.+.+.+ ..+.+||+|+||+..+..... ..+....+.+.|.+
T Consensus 82 ~v~p~~rg~Gig~~l~~~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~-----~~~g~~~~~~~~~~ 156 (160)
T 2i6c_A 82 MVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERH-----DPDGRRVALIQMDK 156 (160)
T ss_dssp EECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE-----CTTSCEEEEEEEEE
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEecCCHHHHHHHHHcCCEEccccccc-----CCCCCeeeeeeeec
Confidence 9999999999999999999999998 7999999887 578999999999998854211 11222235567766
Q ss_pred cCC
Q 013702 424 LLP 426 (438)
Q Consensus 424 ll~ 426 (438)
.++
T Consensus 157 ~l~ 159 (160)
T 2i6c_A 157 PLE 159 (160)
T ss_dssp ECC
T ss_pred cCC
Confidence 554
|
| >2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.3e-16 Score=134.62 Aligned_cols=120 Identities=23% Similarity=0.262 Sum_probs=95.3
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHH----HHhhc----CcEEEEEECCEEEEEEEEeeecC-----CCe
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL----DSFYVVEREGQIIACAALFPFFK-----EKC 342 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~----l~~~~----~~~~V~~~dg~iVG~~~l~~~~~-----~~~ 342 (438)
+.+.||+++++|++.+.+++......... .+.+. +...+ ..+++++.++++||++.+..... ...
T Consensus 4 m~~~iR~~~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 81 (150)
T 2dxq_A 4 DAISLRAAGPGDLPGLLELYQVLNPSDPE--LTTQEAGAVFAAMLAQPGLTIFVATENGKPVATATLLIVPNLTRAARPY 81 (150)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHCTTSCC--CCHHHHHHHHHHHHHSTTEEEEEEEETTEEEEEEEEEEECCSHHHHCCE
T ss_pred CceEEEECChhhHHHHHHHHHHhcccccc--ccHHHHHHHHHHHhcCCCceEEEEecCCEEEEEEEEEEecccccCCCce
Confidence 45789999999999999998776443221 22222 22211 24678888999999999875432 246
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeE
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRE 397 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~ 397 (438)
++|..++|+|+|||||||++|+++++++|++.|+.++.+.+ ..+++||+|+||+.
T Consensus 82 ~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~~ 140 (150)
T 2dxq_A 82 AFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFVQ 140 (150)
T ss_dssp EEEEEEECCGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECCCCHHHHHHHHHTTCEE
T ss_pred EEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHcCCcc
Confidence 89999999999999999999999999999999999999988 47999999999993
|
| >3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.4e-16 Score=135.11 Aligned_cols=124 Identities=14% Similarity=0.121 Sum_probs=99.5
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEE-ECCEEEEEEEEeeecCCCeEEEEEEE
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVE-REGQIIACAALFPFFKEKCGEVAAIG 349 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~-~dg~iVG~~~l~~~~~~~~~~I~~v~ 349 (438)
+++..||+++++|++.+.++....+.... .++.+...... ..++++. .++++||++.+.+. ..+.++|..++
T Consensus 2 ~M~~~ir~~~~~d~~~i~~l~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~-~~~~~~i~~~~ 78 (147)
T 3efa_A 2 NAMKIIFSASPANRAAAYALRQAVFVEER--GISADVEFDVKDTDQCEYAVLYLQPDLPITTLRLEPQ-ADHVMRFGRVC 78 (147)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHTTTTT--CCCHHHHSCTTCSTTCCEEEEEEETTEEEEEEEEEEC-STTEEEEEEEE
T ss_pred chhHHhHcCCHhHHHHHHHHHHHHhhhcc--CCCcHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEeC-CCCeEEEEEEE
Confidence 35668999999999999999887765422 22232221111 2341555 89999999999854 56889999999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 79 V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~Gf~~~~~~ 131 (147)
T 3efa_A 79 TRKAYRGHGWGRQLLTAAEEWATQRGFTHGEIHGELTAQRFYELCGYRVTAGP 131 (147)
T ss_dssp ECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEECC
T ss_pred EcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEeccHHHHHHHHHcCCcccCCc
Confidence 9999999999999999999999999999999988 589999999999998854
|
| >3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8.6e-16 Score=137.34 Aligned_cols=124 Identities=17% Similarity=0.183 Sum_probs=102.5
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCH-------------HHHHhhc----Cc----EEEEEECCEEEEEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTD-------------EELLKAL----DS----FYVVEREGQIIACAAL 334 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~-------------e~l~~~~----~~----~~V~~~dg~iVG~~~l 334 (438)
+.+.||+++++|++.+.+++...+...+....+. +.+...+ .. ++++..++++||++.+
T Consensus 25 m~i~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~ 104 (183)
T 3fix_A 25 MSIEIRKLSIEDLETLIEVARESWKWTYAGIYSEEYIESWIREKYSKEKLLNEIVRSQSNLDILFLGAFADSTLIGFIEL 104 (183)
T ss_dssp SCEEEEECCGGGHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHTCHHHHHHHHHHHHTTSSEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEeCCHhhHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHhcChHHHHHHHccccccccceEEEEEeCCEEEEEEEE
Confidence 4588999999999999999988665533322222 2222222 23 8899999999999999
Q ss_pred eeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 335 FPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 335 ~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
... ...++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+.++..
T Consensus 105 ~~~--~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~ 173 (183)
T 3fix_A 105 KII--ANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDTD 173 (183)
T ss_dssp EEE--TTEEEEEEEEECGGGCCHHHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEC
T ss_pred EeC--CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHHHcCCEEeccc
Confidence 855 67899999999999999999999999999999999999999887 579999999999998765
|
| >3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A | Back alignment and structure |
|---|
Probab=99.69 E-value=4e-17 Score=155.90 Aligned_cols=141 Identities=21% Similarity=0.167 Sum_probs=113.4
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ ++++++.+.+.+ ...++.+.+..+|++|.|||+++. .|.. ++|+|
T Consensus 94 al~~~G~~----a~~~~~~~~~~v------------------~~~~~~~~~~~lL~~g~IpVv~~~----~g~~-~~~~D 146 (243)
T 3ek6_A 94 ALEKLGAK----VRVMSAIKINDV------------------CEDFIRRRAIRHLEKGRIAIFAAG----TGNP-FFTTD 146 (243)
T ss_dssp HHHHTTCC----EEEEESSCBTTT------------------BEECCHHHHHHHHHTTCEEEEEST----TSST-TCCHH
T ss_pred HHHHcCCC----eEEechhhcCcc------------------cCcCCHHHHHHHHHCCcEEEEECC----CCCC-cCChH
Confidence 66777775 899998764321 124578899999999999999982 3333 59999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCC
Q 013702 103 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 175 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (438)
++|+.+|.+|+||+|+|+|||+|++ |++++|++++.+|+.+ .+.
T Consensus 147 ~~Aa~lA~~l~Ad~li~lTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~---~g~-------------------------- 197 (243)
T 3ek6_A 147 SGAALRAIEIGADLLLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIM---QGL-------------------------- 197 (243)
T ss_dssp HHHHHHHHHHTCSEEEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHH---HTC--------------------------
T ss_pred HHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceecccccHHHHHh---CCc--------------------------
Confidence 9999999999999999999999873 3578999999988654 221
Q ss_pred CccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 013702 176 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 255 (438)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~ 255 (438)
+ + | |+.+|..|+++|++ +||+|++.|
T Consensus 198 -----------------------------~-~---------------------~--~~~a~~~a~~~gv~-v~I~~g~~~ 223 (243)
T 3ek6_A 198 -----------------------------E-V---------------------M--DTAAFALARDSDLP-LRIFGMSEP 223 (243)
T ss_dssp -----------------------------C-S---------------------S--CHHHHHHHHHTTCC-EEEECCCST
T ss_pred -----------------------------h-h---------------------H--HHHHHHHHHHCCCe-EEEEcCCCc
Confidence 0 1 3 58899999999997 999999999
Q ss_pred ceeeeehhhcCCCcccccC
Q 013702 256 GVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 256 ~~ll~el~~~~g~GT~i~~ 274 (438)
+.+ .++|++++.||.|.+
T Consensus 224 ~~l-~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 224 GVL-LRILHGAQIGTLVQG 241 (243)
T ss_dssp THH-HHHHTTCCCSEEECC
T ss_pred cHH-HHHHCCCCCceEEee
Confidence 975 599999999999976
|
| >2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.4e-16 Score=136.63 Aligned_cols=123 Identities=20% Similarity=0.229 Sum_probs=96.2
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCC-----cCC---HHHHHhhc----CcEEEEEECCEEEEEEEEeeec-------
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALV-----RRT---DEELLKAL----DSFYVVEREGQIIACAALFPFF------- 338 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~-----~~~---~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~------- 338 (438)
+.||+++++|++.+.+++...+...... .+. .+.+...+ ..+++++.++++|||+.+....
T Consensus 2 ~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~ 81 (153)
T 2q0y_A 2 MECRPLCIDDLELVCRHREAMFREAGRDALTLAAMQDPFRDWLLPRLADGSYFGWVMEEGGAPLAGIGLMVIEWPPHPSH 81 (153)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTSSEEEEEEETTEEEEEEEEEEEECCCBTTB
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHHHHHHhcCCCeeEEEEEeCCeEEEEEEEEeeccCCCCCC
Confidence 5799999999999999988765543211 000 11111111 2568888999999999886421
Q ss_pred --CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEece
Q 013702 339 --KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 400 (438)
Q Consensus 339 --~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~ 400 (438)
....++|..++|+|+|||||||++||+++++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 82 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~~~~~A~~fY~k~GF~~~~~ 146 (153)
T 2q0y_A 82 PLQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFAVLHATEMGQPLYARMGWSPTTE 146 (153)
T ss_dssp TTCSEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEECCCTTTHHHHHHTTCCCCCC
T ss_pred CCCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCHHHHHHHHHcCCccchh
Confidence 124678999999999999999999999999999999999999988 57899999999998774
|
| >2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-15 Score=135.91 Aligned_cols=146 Identities=15% Similarity=0.181 Sum_probs=113.5
Q ss_pred CceeEEEECC--ccCHHHHHHHHHHHHHcCcCCcCCH------HHHHhhc----CcEEEEEECCEEEEEEEEeeecCCCe
Q 013702 275 DLYEGTRTAK--VTDLSGIKQIIQPLVESGALVRRTD------EELLKAL----DSFYVVEREGQIIACAALFPFFKEKC 342 (438)
Q Consensus 275 d~~~~IR~at--~~D~~~I~~L~~~~~~~~~~~~~~~------e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~~~~ 342 (438)
...+.||+++ ++|++.+.+++.......+..++.. +.+..++ ..+++++.++++||++.+... ....
T Consensus 17 ~~~~~iR~~~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~-~~~~ 95 (181)
T 2q7b_A 17 FQGMEIKEYENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRI-DDKT 95 (181)
T ss_dssp CTTEEEEECCCCHHHHHHHHHHHHHHHHTTSCCCCCGGGGGGGGCHHHHTGGGTCEEEEEEETTEEEEEEEEEEC-SSSE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCccccchHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEc-CCCE
Confidence 4567899999 9999999999988766544322221 2233322 457888899999999999854 4568
Q ss_pred EEEEEEEECccccC--CcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCC
Q 013702 343 GEVAAIGVSPECRG--QGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRN 416 (438)
Q Consensus 343 ~~I~~v~V~p~yRg--qGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~ 416 (438)
++|..++|+|+||| +|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+...++. .|.....
T Consensus 96 ~~i~~~~V~p~~rg~~~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~----~~~~~~~ 171 (181)
T 2q7b_A 96 AVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDV----DYIFPDR 171 (181)
T ss_dssp EEEEEEEECGGGSSTTTCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEECTTTCCC----SCCCCSS
T ss_pred EEEEEEEEChhhcCccccHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHCCCEEeeeeeccc----cccCCCc
Confidence 99999999999999 999999999999999999999999887 4789999999999998765442 2333445
Q ss_pred ceEEEEccC
Q 013702 417 SKYYMKKLL 425 (438)
Q Consensus 417 s~~~~k~ll 425 (438)
+.++|.+.+
T Consensus 172 ~~~~~~~~L 180 (181)
T 2q7b_A 172 DSRIYVKLL 180 (181)
T ss_dssp SEEEEEEEC
T ss_pred ceeeEEEec
Confidence 666666543
|
| >3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.3e-15 Score=131.24 Aligned_cols=147 Identities=18% Similarity=0.125 Sum_probs=114.4
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcC----CcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecC---CCe
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKC 342 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~---~~~ 342 (438)
.+.||+++++|++.+.+++......... .+.+.+.+..++ ..++++..++++||++.+.+... ...
T Consensus 3 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~ 82 (174)
T 3dr6_A 3 AMTIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRY 82 (174)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHSSTTTTCCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTT
T ss_pred ceEEeeCChhhHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHhhcccCceEEEEecCCeEEEEEEEeecCCCCCcce
Confidence 4689999999999999999987665332 345666655443 35788899999999999976432 245
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCce
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 418 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~ 418 (438)
.++..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+...-.. ..+....+.
T Consensus 83 ~~~~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~~~~~----~~~g~~~~~ 158 (174)
T 3dr6_A 83 TVEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQMPQVG----VKFGRWLDL 158 (174)
T ss_dssp EEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEE
T ss_pred EEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhCCCEEEEEccceE----EECCeeEEE
Confidence 78889999999999999999999999999999999998877 5789999999999988643110 112223566
Q ss_pred EEEEccCCC
Q 013702 419 YYMKKLLPD 427 (438)
Q Consensus 419 ~~~k~ll~~ 427 (438)
++|.+.+++
T Consensus 159 ~~m~~~l~~ 167 (174)
T 3dr6_A 159 TFMQLQLDE 167 (174)
T ss_dssp EEEEEECCC
T ss_pred EEEEeeccC
Confidence 888777764
|
| >4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A | Back alignment and structure |
|---|
Probab=99.68 E-value=8.8e-16 Score=135.28 Aligned_cols=124 Identities=18% Similarity=0.095 Sum_probs=99.6
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeecC-------CCeEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK-------EKCGE 344 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~-------~~~~~ 344 (438)
..+.||+++.+|++.+.+++...+.. ......+.+...+ ..+++++.++++||++.+..... ...++
T Consensus 20 ~~~~ir~~~~~D~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~ 97 (166)
T 4evy_A 20 QGMNIKPASEASLKDWLELRNKLWSD--SEASHLQEMHQLLAEKYALQLLAYSDHQAIAMLEASIRFEYVNGTETSPVGF 97 (166)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHSCC--CHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEE
T ss_pred CCcEEEECCHHHHHHHHHHHHHHhcC--CchHHHHHHHHHhcCCCceEEEEEECCeEEEEEEEEeecccccCCCCCCeEE
Confidence 44679999999999999998775443 1111123333333 34788899999999999854321 57899
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
|..++|+|+|||+|||++|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 98 i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 158 (166)
T 4evy_A 98 LEGIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFASDAALDNVISHAMHRSLGFQETEKV 158 (166)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEChhhhcCCHHHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHcCCEecceE
Confidence 999999999999999999999999999999999999888 469999999999998753
|
| >2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=9.7e-16 Score=134.74 Aligned_cols=146 Identities=14% Similarity=0.132 Sum_probs=111.6
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCC--CeEEEEEEE
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKE--KCGEVAAIG 349 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~--~~~~I~~v~ 349 (438)
.+.+.||+++++|++.+.+++...+.. .++.+.+...+ ..++++..++++||++.+...... ..++|..++
T Consensus 4 ~~~~~ir~~~~~D~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~i~~~~ 79 (170)
T 2ob0_A 4 GSRIELGDVTPHNIKQLKRLNQVIFPV----SYNDKFYKDVLEVGELAKLAYFNDIAVGAVCCRVDHSQNQKRLYIMTLG 79 (170)
T ss_dssp TCSEEEEECCTTTHHHHHHHHHHHCSS----CCCHHHHHHHTTSGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCcEEEEECCHhhHHHHHHHHHHHccc----ccCHHHHHHHhcCCCcEEEEEECCeEEEEEEEEEEecCCCcEEEEEEEE
Confidence 345789999999999999998775433 34455554443 457888899999999998754332 478999999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhh-cCCCCceEEEEc
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRI-NLSRNSKYYMKK 423 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y-~~~r~s~~~~k~ 423 (438)
|+|+|||+|||++|++.+++++++. |++.+.+.+ ..+.+||+|+||+..+...- .| +....+.++|.+
T Consensus 80 v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~------~~~~g~~~~~~~m~~ 153 (170)
T 2ob0_A 80 CLAPYRRLGIGTKMLNHVLNICEKDGTFDNIYLHVQISNESAIDFYRKFGFEIIETKKN------YYKRIEPADAHVLQK 153 (170)
T ss_dssp ECGGGTTSSHHHHHHHHHHHHHHHHCCCSEEEEEEETTCHHHHHHHHHTTCEEEEEETT------CCSSSSSCCEEEEEE
T ss_pred ECHHHcCcCHHHHHHHHHHHHHHhcCCccEEEEEEecCCHHHHHHHHHcCCEEeEeeec------cccCCCCCccEEEEE
Confidence 9999999999999999999999987 999999887 37999999999999876531 11 223457788888
Q ss_pred cCCCCCC
Q 013702 424 LLPDTSG 430 (438)
Q Consensus 424 ll~~~~g 430 (438)
.++...+
T Consensus 154 ~l~~~~~ 160 (170)
T 2ob0_A 154 NLKVPSG 160 (170)
T ss_dssp EC-----
T ss_pred eccCCcc
Confidence 7765444
|
| >1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-15 Score=131.57 Aligned_cols=126 Identities=17% Similarity=0.132 Sum_probs=105.0
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc-CCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeec-------------
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF------------- 338 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~-~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~------------- 338 (438)
.+.||+++++|++.+.+++...+.... ..+++.+.+...+ ..++++..++++||++.+.+..
T Consensus 5 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~ 84 (166)
T 1cjw_A 5 ANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHR 84 (166)
T ss_dssp SSEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCC
T ss_pred ceeeecCCHHHHHHHHHHHHHhCCCCcccCccCHHHHHHHHhcCCCcEEEEEECCeEEEEEEeeeecccccccccccccc
Confidence 468999999999999999887654322 2356666666554 4688889999999999988652
Q ss_pred -CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHHCCCeEeceec
Q 013702 339 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 339 -~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t-~~a~~fY~k~GF~~~g~~~ 402 (438)
..+.++|..++|+|+|||+|||++|++.+++++++. |++.+.+.+ ..+.+||+|+||+..+...
T Consensus 85 ~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~~~ 151 (166)
T 1cjw_A 85 PRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCA 151 (166)
T ss_dssp TTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGGHHHHHTTTEEEEEECS
T ss_pred CCCCceEEEEEEECHhhccCChHHHHHHHHHHHHHHhcCcceEEEecCchHHHHHHHcCCeECCccc
Confidence 357899999999999999999999999999999995 999998866 5799999999999998643
|
| >4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-15 Score=131.10 Aligned_cols=125 Identities=19% Similarity=0.200 Sum_probs=101.9
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcC----------cCCcCCHHHHHhhc----CcEEEEEECC-EEEEEEEEeeecC---
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESG----------ALVRRTDEELLKAL----DSFYVVEREG-QIIACAALFPFFK--- 339 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~----------~~~~~~~e~l~~~~----~~~~V~~~dg-~iVG~~~l~~~~~--- 339 (438)
+.||+++.+|++.+.+++...+... ...+++.+.+...+ ..+++++.++ ++||++.+.....
T Consensus 1 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~~~~~~~~~~ 80 (164)
T 4e0a_A 1 MIIREATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDEREKIGAYSVIHLVQTPLL 80 (164)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHHHHHCTTTBCCCSSSSCHHHHHHHHHCSSEEEEEEEEETTEEEEEEEEEEEEECCC
T ss_pred CEEEEcCccCHHHHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHhcCCceEEEEEECCCCcEEEEEEEEecCCCCC
Confidence 4799999999999999998865321 12344566665554 3567888877 9999999875432
Q ss_pred -----CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 340 -----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 340 -----~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
...++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+...
T Consensus 81 ~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~~~~~~~ 152 (164)
T 4e0a_A 81 PTMQQRKTVYISDLCVDETRRGGGIGRLIFEAIISYGKAHQVDAIELDVYDFNDRAKAFYHSLGMRCQKQTM 152 (164)
T ss_dssp SSBCCEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred ccccCCcEEEEEEEEECHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEEcCCHHHHHHHHHcCCEEeceec
Confidence 24589999999999999999999999999999999999999887 4799999999999998654
|
| >2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-15 Score=133.43 Aligned_cols=144 Identities=17% Similarity=0.150 Sum_probs=113.0
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 353 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~ 353 (438)
|+.||+++++|++.+.+++.... ..+++.+.+...+ ..++++..++++||++.+.+. .+.++|..++|+|+
T Consensus 1 Mi~ir~~~~~D~~~i~~l~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~--~~~~~i~~~~v~p~ 74 (160)
T 2cnt_A 1 MNTISILSTTDLPAAWQIEQRAH----AFPWSEKTFFGNQGERYLNLKLTADDRMAAFAITQVV--LDEATLFNIAVDPD 74 (160)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHC----SSCCCHHHHHHSCSTTBCCEEEEETTEEEEEEEEEEE--TTEEEEEEEEECGG
T ss_pred CeEEEeCCHHHHHHHHHHHHhhc----ccCCCHHHHHHHhccCccEEEEEECCeEEEEEEEEec--CCceEEEEEEECHH
Confidence 36899999999999999977654 2346677776665 246788899999999999854 36789999999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCCCC
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTS 429 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~~~ 429 (438)
|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+...-... ......+.++|.+..++.+
T Consensus 75 ~rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~ 150 (160)
T 2cnt_A 75 FQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYP----TAQGHEDAIIMALPISMKL 150 (160)
T ss_dssp GCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEEE----ETTEEEEEEEEEEECCCCC
T ss_pred HcCCCHHHHHHHHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHCCCEEEEEEeeeee----cCCCCccEEEEEeechhhh
Confidence 999999999999999999999999999887 48999999999999885421100 0011356678877776544
Q ss_pred C
Q 013702 430 G 430 (438)
Q Consensus 430 g 430 (438)
-
T Consensus 151 ~ 151 (160)
T 2cnt_A 151 H 151 (160)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.3e-18 Score=162.74 Aligned_cols=131 Identities=17% Similarity=0.174 Sum_probs=106.2
Q ss_pred eEeeeCHHHHHHHhcCCceEEEcCc-ccC--C----CCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CC
Q 013702 64 EVKKVDVTRMRERLDGGCLVILSNL-GYS--S----SGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ES 129 (438)
Q Consensus 64 ~v~~v~~~~i~~ll~~g~IPVi~~i-~~~--~----~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~ 129 (438)
.++.+|.+.|+.+|++|.|||++|+ +++ . .|...++|+|++|+.+|.+|+||+|+|+|||+|++ ++
T Consensus 125 ~vt~~d~~~i~~lL~~g~ipVi~g~~g~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~ 204 (270)
T 2ogx_B 125 VVGGAGLSAVPLSLAEVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKD 204 (270)
T ss_dssp BCCSSTTCHHHHHCTTCCEEEEECSCTTGGGCCCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTT
T ss_pred eecHhhHHHHHHHHhCCCEEEEeCCccccccccccccccCCCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCC
Confidence 5667888899999999999999987 333 2 35567799999999999999999999999999873 34
Q ss_pred CcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCc
Q 013702 130 GHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLW 209 (438)
Q Consensus 130 ~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~ 209 (438)
+++|++++.+|+++++..+. .++ | |
T Consensus 205 a~~i~~i~~~e~~~~~~~g~---------------------------------------------------~~~-g-g-- 229 (270)
T 2ogx_B 205 ATFIPRISVDEMKAKGLHDS---------------------------------------------------ILE-F-P-- 229 (270)
T ss_dssp CCEESEEEHHHHHHTTCCCT---------------------------------------------------TSC-H-H--
T ss_pred CeEcceeCHHHHHHHhcCCC---------------------------------------------------ccc-H-H--
Confidence 89999999998887753221 011 1 2
Q ss_pred cccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 210 SSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
|.+|+++|. .++ ++||+|++.|+.+ .++|++++.||.|.+
T Consensus 230 -------------------m~~kl~aa~----~~~-~v~I~~g~~~~~l-~~~l~g~~~GT~i~~ 269 (270)
T 2ogx_B 230 -------------------VLDLLQSAQ----HVR-EVQVVNGLVPGNL-TRALAGEHVGTIITA 269 (270)
T ss_dssp -------------------HHHHHHHCS----SCC-EEEEEETTSTTHH-HHHHTTCCCSEEEEC
T ss_pred -------------------HHHHHHHhh----cCC-cEEEEeCCCchHH-HHHHcCCCCCeEecC
Confidence 999999884 445 7999999999976 789999999999975
|
| >3gy9_A GCN5-related N-acetyltransferase; YP_001815201.1, putative acetyltransferase; HET: MSE COA SO4; 1.52A {Exiguobacterium sibiricum 255-15} PDB: 3gya_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.4e-16 Score=135.81 Aligned_cols=126 Identities=18% Similarity=0.222 Sum_probs=103.8
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhh--------cCcEEEEEECCEEEEEEEEeeec--CCCeEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--------LDSFYVVEREGQIIACAALFPFF--KEKCGEV 345 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~--------~~~~~V~~~dg~iVG~~~l~~~~--~~~~~~I 345 (438)
|.+.||+++++|.+.+.+++.......+. ...+....+ ...+++++.++++||++.+.+.. ....++|
T Consensus 2 M~~~ir~~~~~D~~~i~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~i 79 (150)
T 3gy9_A 2 MDVTIERVNDFDGYNWLPLLAKSSQEGFQ--LVERMLRNRREESFQEDGEAMFVALSTTNQVLACGGYMKQSGQARTGRI 79 (150)
T ss_dssp CCCEEEECSCGGGSCCHHHHHHHHHTTCC--HHHHHHHTTTTSCSCSTTCEEEEEECTTCCEEEEEEEEECTTSTTEEEE
T ss_pred CcEEEEECcccCHHHHHHHHHHHHHhccc--chHHHHHHHHHhhhcCCCcEEEEEEeCCeEEEEEEEEeccCCCCCeEEE
Confidence 34689999999999999999988777442 111122222 24578889999999999998543 5689999
Q ss_pred EEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEeceeccc
Q 013702 346 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 346 ~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~~lp 404 (438)
..++|+|+|||||||++|++.+++++++ |+..+.+.+..+.+||+|+||+.++...++
T Consensus 80 ~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~~i~l~~~~a~~~y~k~GF~~~~~~~~~ 137 (150)
T 3gy9_A 80 RHVYVLPEARSHGIGTALLEKIMSEAFL-TYDRLVLYSEQADPFYQGLGFQLVSGEKIT 137 (150)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHTT-TCSEEEECCSSCHHHHHHTTCEECCCSSCS
T ss_pred EEEEECHhhcCCCHHHHHHHHHHHHHHh-CCCEEEEechHHHHHHHHCCCEEeeeeeee
Confidence 9999999999999999999999999998 999999988789999999999998765443
|
| >1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=4.8e-16 Score=134.48 Aligned_cols=147 Identities=12% Similarity=0.115 Sum_probs=107.2
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHH-hhcCcEEEEEECCEEEEEEEEeeec-CCCeEEEEEEEECcccc
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL-KALDSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECR 355 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~-~~~~~~~V~~~dg~iVG~~~l~~~~-~~~~~~I~~v~V~p~yR 355 (438)
+.||+++++|++.+.+++...+............+. ..-..+++++.++++||++.+.... ....++|..++|+|+||
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~r 81 (157)
T 1mk4_A 2 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred cEEEECCHhHHHHHHHHHHHhccCcchhhHHHHHHHhccCCcEEEEEECCeEEEEEEEecCCCCCCeEEEEEEEECHHHc
Confidence 579999999999999998765443222111111221 1224578888899999999886533 35789999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchH--hhhhhcCCCCceEEEEcc
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEE--RRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~--~~~~y~~~r~s~~~~k~l 424 (438)
|+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+....... ....|.....+.++|.+.
T Consensus 82 g~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~~~~~g~~~~~~~~~~~~~~~~~~k~ 156 (157)
T 1mk4_A 82 KMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDRVLFVKN 156 (157)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCSEEETTEEEBTTTTSTTCCBEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHcCCEEcCCcceecceeeecCCCCCCceeEEEEec
Confidence 9999999999999999999999999888 47999999999999884221000 011233344566666653
|
| >2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-15 Score=133.04 Aligned_cols=146 Identities=14% Similarity=0.227 Sum_probs=108.8
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC----CcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecC---CC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EK 341 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~---~~ 341 (438)
..+.||+++++|++.+.+++......... .+.+.+.+..++ ..++++..++++||++.+..... ..
T Consensus 6 ~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 85 (170)
T 2ge3_A 6 DTVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAH 85 (170)
T ss_dssp CCCEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTT
T ss_pred CcEEEeeCCHHHHHHHHHHHHhhhhcccccccCCCCCHHHHHHHHHhhccCCceEEEEEECCEEEEEEEEecccccCCCc
Confidence 44689999999999999999876544321 233444333322 35778889999999999886432 34
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCc
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 417 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s 417 (438)
.+++ .++|+|+|||||||++|++.+++++++.|++.+.+.+ .++.+||+|+||+..+...-.. ..+....+
T Consensus 86 ~~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~----~~~g~~~d 160 (170)
T 2ge3_A 86 CGTL-GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDAV----SIDGHYID 160 (170)
T ss_dssp EEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEE----ESSSCEEE
T ss_pred eEEE-EEEECHHHhCCCHHHHHHHHHHHHHHHCCceEEEEEEEcCCHHHHHHHHHCCCEEEeEecceE----eeCCEEee
Confidence 6677 8999999999999999999999999999999999888 4899999999999987542110 01222345
Q ss_pred eEEEEccCC
Q 013702 418 KYYMKKLLP 426 (438)
Q Consensus 418 ~~~~k~ll~ 426 (438)
.++|.++++
T Consensus 161 ~~~~~~~~~ 169 (170)
T 2ge3_A 161 SLNMAIIFG 169 (170)
T ss_dssp EEEEEEECC
T ss_pred eeeEeehhc
Confidence 677766654
|
| >2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=8.3e-16 Score=136.00 Aligned_cols=144 Identities=20% Similarity=0.213 Sum_probs=101.8
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCC----cCCHHHHHhhc-CcEEEEE-ECCEEEEEEEEeee-c---CCCeEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALV----RRTDEELLKAL-DSFYVVE-REGQIIACAALFPF-F---KEKCGEVAA 347 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~----~~~~e~l~~~~-~~~~V~~-~dg~iVG~~~l~~~-~---~~~~~~I~~ 347 (438)
+.||+++++|++.+.+++.......... +.+.+.+..++ ...+++. .++++||++.+.+. . ....+++ .
T Consensus 8 i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~-~ 86 (166)
T 2ae6_A 8 LTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLL-S 86 (166)
T ss_dssp EEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEE-E
T ss_pred eEEEEcCHHHHHHHHHHHHHHHHhhhccCCCCCCCHHHHHHHhccCeEEEEeeCCEEEEEEEEEeccccCCCceEEEE-E
Confidence 6899999999999999987654322111 11222344443 4555665 78999999998854 1 1345666 8
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEc
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 423 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ 423 (438)
++|+|+|||||||++|++.+++++++.|++.+.+.+ ..+++||+|+||+..+...... ..+....+.++|.+
T Consensus 87 l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Yek~GF~~~~~~~~~~----~~~g~~~d~~~m~~ 162 (166)
T 2ae6_A 87 IGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHFKEEF----YINGHYCDDYQYAY 162 (166)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEEEEEEE
T ss_pred EEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeecCCHHHHHHHHHcCCEEeeEEcceE----EECCEEchhhhhhH
Confidence 999999999999999999999999999999999887 4899999999999987542110 00122246677776
Q ss_pred cCC
Q 013702 424 LLP 426 (438)
Q Consensus 424 ll~ 426 (438)
++.
T Consensus 163 ~~~ 165 (166)
T 2ae6_A 163 FIE 165 (166)
T ss_dssp EC-
T ss_pred Hhc
Confidence 653
|
| >1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-15 Score=136.96 Aligned_cols=146 Identities=25% Similarity=0.355 Sum_probs=107.5
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCc----CCcCCHHHHHhhc------CcEEEEEEC-CEEEEEEEEeeecC----CCe
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFK----EKC 342 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~~------~~~~V~~~d-g~iVG~~~l~~~~~----~~~ 342 (438)
+.||+++++|++.+.+++........ ..+++.+.+..++ ..+++++.+ +++||++.+.+... ...
T Consensus 3 ~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 82 (175)
T 1vhs_A 3 LTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKT 82 (175)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTTE
T ss_pred eEEEeCCHHHHHHHHHHHHHHhhcCCcccccccCCHHHHHHHHHhcCCCceEEEEEcCCCcEEEEEEEeccCCCCccCCE
Confidence 67999999999999999987654321 1233444333322 246788877 99999999986432 245
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCce
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 418 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~ 418 (438)
+++ .++|+|+|||||||++|++.++++|++.|++.+.+.+ .+|++||+|+||+..+...-.. ..+....+.
T Consensus 83 ~e~-~l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~~yek~GF~~~g~~~~~~----~~~g~~~d~ 157 (175)
T 1vhs_A 83 AEV-SIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPGIA----EMDGKRYDL 157 (175)
T ss_dssp EEE-EEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEE
T ss_pred EEE-EEEEChhhcCCCHHHHHHHHHHHHHHhCCceEEEEEEecCCHHHHHHHHHCCCEEEeEcccce----eeCCEEEEE
Confidence 666 8999999999999999999999999999999999887 5899999999999988542100 012223466
Q ss_pred EEEEccCCCC
Q 013702 419 YYMKKLLPDT 428 (438)
Q Consensus 419 ~~~k~ll~~~ 428 (438)
++|.+++++.
T Consensus 158 ~~m~~~~~~~ 167 (175)
T 1vhs_A 158 KILGRELSEG 167 (175)
T ss_dssp EEEEEECCC-
T ss_pred EEEEEECCCc
Confidence 7787776643
|
| >2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-15 Score=131.05 Aligned_cols=126 Identities=22% Similarity=0.237 Sum_probs=99.6
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCc---CCcCCHHHHHhhc------CcEEEEEECCEEEEEEEEeeec----CCC
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF----KEK 341 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~---~~~~~~e~l~~~~------~~~~V~~~dg~iVG~~~l~~~~----~~~ 341 (438)
.|.+.||+++++|++.+.+++........ ..+++.+.+..++ ..++++..++++||++.+.+.. ...
T Consensus 8 ~M~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 87 (166)
T 2fe7_A 8 HMTLEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRN 87 (166)
T ss_dssp ---CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTEE
T ss_pred cCceEEEECCHHHHHHHHHHHHHHHHhhcccccCCccHHHHHHHhhcCCCCceEEEEEeCCeEEEEEEEEeccCCcccCC
Confidence 45588999999999999999987543221 2345666666654 3478888999999999987532 224
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
.++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 88 ~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 150 (166)
T 2fe7_A 88 GIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQDE 150 (166)
T ss_dssp EEEEEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEECTT
T ss_pred cEEEEEEEECccccCccHHHHHHHHHHHHHHHCCCCEEEEEEccCCHHHHHHHHHcCCeEccc
Confidence 589999999999999999999999999999999999999887 48999999999999864
|
| >2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.4e-15 Score=133.99 Aligned_cols=124 Identities=25% Similarity=0.321 Sum_probs=95.2
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHc-C--cCCcCCHHHHHhh-c-----CcEEEEEE--------CCEEEEEEEEeeec
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVES-G--ALVRRTDEELLKA-L-----DSFYVVER--------EGQIIACAALFPFF 338 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~-~--~~~~~~~e~l~~~-~-----~~~~V~~~--------dg~iVG~~~l~~~~ 338 (438)
+.+.||+++++|++.|.+++...... . ...+++.+.+... + ..+++++. ++++|||+.+....
T Consensus 2 m~~~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~ivG~~~~~~~~ 81 (170)
T 2bei_A 2 ASVRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIY 81 (170)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEE
T ss_pred CceEEEECCHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHhcCCCCcEEEEEEEeccccCCCCCCcEEEEEEEEeec
Confidence 34689999999999999998764321 1 1233455555432 1 23467776 78999999875422
Q ss_pred ---CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEec
Q 013702 339 ---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 399 (438)
Q Consensus 339 ---~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g 399 (438)
....++|..++|+|+|||||||++||+.++++|++.|++.+.+.+ .++++||+|+||+..+
T Consensus 82 ~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~~~~ 149 (170)
T 2bei_A 82 STWKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLT 149 (170)
T ss_dssp ETTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEHH
T ss_pred cccCCCcEEEEEEEEChHhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeccCHHHHHHHHHCCCEecc
Confidence 124678999999999999999999999999999999999999887 4899999999999865
|
| >1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-16 Score=152.77 Aligned_cols=144 Identities=14% Similarity=0.096 Sum_probs=113.0
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ ++++++.+...+. | ..++.+. ..||+.|.|||++|. .| ..|+|+|
T Consensus 92 al~~~G~~----~~~~~~~~~~~~~----------~-------~~~~~~~-~~lL~~g~IpVi~~~----~g-~~~~~~D 144 (252)
T 1z9d_A 92 SLQHYGVD----TRVQTAIPMQNVA----------E-------PYIRGRA-LRHLEKNRIVVFGAG----IG-SPYFSTD 144 (252)
T ss_dssp HHHTTTCC----EEEEESSCBTTTB----------E-------ECCHHHH-HHHHHTTCEEEEEST----TS-CTTCCHH
T ss_pred HHHHcCCC----eEEEecccccccc----------C-------cchHHHH-HHHHhCCCEEEEeCC----cC-CCCCChH
Confidence 56666664 8888887553211 1 1246555 899999999999982 23 3499999
Q ss_pred HHHHHHHHHcCCCEEEEEe-cCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCC
Q 013702 103 EVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 174 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~lt-dv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (438)
++|+.+|.+|+||+|+|+| ||+|+. +++++|++++.+|+.++ +.
T Consensus 145 ~~Aa~lA~~l~Ad~LiilT~DVdGvy~~dP~~~~~a~~i~~i~~~e~~~~---~~------------------------- 196 (252)
T 1z9d_A 145 TTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIKR---GL------------------------- 196 (252)
T ss_dssp HHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHTT---TC-------------------------
T ss_pred HHHHHHHHhcCCCEEEEecCCCCeeeCCCCCCCCCCeEeeEecHHHHHhc---cc-------------------------
Confidence 9999999999999999999 999873 24899999998876542 21
Q ss_pred CCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 013702 175 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 254 (438)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~ 254 (438)
+ + | |+.+|..|++.|++ +||+|++.
T Consensus 197 ------------------------------~-~---------------------m--k~~aa~~a~~~gv~-v~I~~g~~ 221 (252)
T 1z9d_A 197 ------------------------------K-I---------------------M--DATASTLSMDNDID-LVVFNMNE 221 (252)
T ss_dssp ------------------------------C-C---------------------S--CHHHHHHHHHTTCE-EEEEETTS
T ss_pred ------------------------------c-c---------------------c--CHHHHHHHHHcCCe-EEEEeCCC
Confidence 1 2 6 78899999999997 99999999
Q ss_pred CceeeeehhhcCCCcccccCCce
Q 013702 255 GGVLLLELFKRDGMGTMVASDLY 277 (438)
Q Consensus 255 ~~~ll~el~~~~g~GT~i~~d~~ 277 (438)
|+.+ .++|++++.||.|.++.|
T Consensus 222 ~~~l-~~~l~g~~~GT~i~~~~~ 243 (252)
T 1z9d_A 222 AGNI-QRVVFGEHIGTTVSNKVC 243 (252)
T ss_dssp TTHH-HHHHTTCCCSEEEECC--
T ss_pred chHH-HHHHcCCCCceEEecCCC
Confidence 9976 789999899999988765
|
| >3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-15 Score=130.57 Aligned_cols=124 Identities=19% Similarity=0.204 Sum_probs=100.8
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcC-------------CHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRR-------------TDEELLKAL--DSFYVVEREGQIIACAALFPFFKE 340 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~-------------~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~ 340 (438)
+.+.||+++++|++.+.++....+...+.... +.+.+...+ ..++++..++++||++.+.+.. .
T Consensus 4 m~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~-~ 82 (163)
T 3fnc_A 4 MDFHIRKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHNRISATPFAVLEQADKVIGFANFIELE-K 82 (163)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHSSHHHHHHHHHHSCEEEEEETTEEEEEEEEEEEE-T
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHhcCCHHHHHHhccCCEEEEEEECCEEEEEEEEEeCC-C
Confidence 45789999999999999998876554433222 223333222 4588999999999999998654 6
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
..++|..++|+|+|||+|||++|++.++++++ ++..+.+.+ ..+.+||+|+||+..+...
T Consensus 83 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~--~~~~i~l~v~~~n~~a~~~y~k~Gf~~~~~~~ 146 (163)
T 3fnc_A 83 GKSELAAFYLLPEVTQRGLGTELLEVGMTLFH--VPLPMFVNVEKGNETAIHFYKAKGFVQVEEFT 146 (163)
T ss_dssp TEEEEEEEEECGGGCSSSHHHHHHHHHHHHTT--CCSSEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CcEEEEEEEECHHHhCCCHHHHHHHHHHHHhc--cCCEEEEEEeCCCHHHHHHHHHcCCEEEEEEE
Confidence 88999999999999999999999999999997 888888777 5799999999999998643
|
| >3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-15 Score=131.71 Aligned_cols=127 Identities=21% Similarity=0.264 Sum_probs=101.0
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcC-C-HHH----HHhhc----CcEEEEEECCEEEEEEEEeeec--------C
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRR-T-DEE----LLKAL----DSFYVVEREGQIIACAALFPFF--------K 339 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~-~-~e~----l~~~~----~~~~V~~~dg~iVG~~~l~~~~--------~ 339 (438)
+.||+++.+|++.+.+++...+.......+ . .+. +...+ ..++++++++++||++.+.... .
T Consensus 2 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~ 81 (157)
T 3mgd_A 2 MNYRKADMKDISLLVSIRKRQLIDEGIEPNIDIDKELTRYFNNKLANNLLVEWIAEENNQIIATAAIAFIDFPPTYTNKT 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCCCCSCCHHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEECCCBTTBTT
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHcCCCCcchhhHHHHHHHHHHhcCCceEEEEEEECCEEEEEEEEEeecCCCCccCcC
Confidence 689999999999999999887654422111 1 222 22221 2468888999999999887531 2
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceeccc
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp 404 (438)
...++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+.++....+
T Consensus 82 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~~~~~ 147 (157)
T 3mgd_A 82 GRKGYITNMYTEPTSRGNGIATGMLDRLVNEAKERNIHKICLVASKLGRPVYKKYGFQDTDEWLEL 147 (157)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEEECCCTTHHHHHHHHTCCCCTTCCCC
T ss_pred CcEEEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCeecceEEEE
Confidence 46789999999999999999999999999999999999999988 578999999999998865443
|
| >1n71_A AAC(6')-II; aminoglycoside 6'-N-acetyltransferase, antibiotic resistance, coenzyme A; HET: COA; 1.80A {Enterococcus faecium} SCOP: d.108.1.1 PDB: 2a4n_A* 1b87_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.4e-15 Score=133.21 Aligned_cols=141 Identities=16% Similarity=0.187 Sum_probs=102.9
Q ss_pred eEEEECCccCHHHHHHHHHHH---HHcCcCCcCCHHHHHhhc--CcEEEEE-ECCEEEEEEEEeeecCCCeEEEEEEEEC
Q 013702 278 EGTRTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKAL--DSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVS 351 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~---~~~~~~~~~~~e~l~~~~--~~~~V~~-~dg~iVG~~~l~~~~~~~~~~I~~v~V~ 351 (438)
+.||+++++|.+.+.++.... +...+. ....+.+...+ ..++++. +++++||++.+.+......++|..++|+
T Consensus 1 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~l~V~ 79 (180)
T 1n71_A 1 MIISEFDRNNPVLKDQLSDLLRLTWPEEYG-DSSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVE 79 (180)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHCTTTSS-STHHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEC
T ss_pred CEEEECCccCHHHHHHHHHHHHHhcccccc-hhHHHHHHHHhCCCcEEEEEecCCeEEEEEEEeccCCCceEEEEEEEEc
Confidence 469999999996665554432 222221 12344454444 2333444 5799999999986656788999999999
Q ss_pred ccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcH-----------------------------HHHHHHHHCCCeEeceec
Q 013702 352 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-----------------------------RTADWFKSRGFRECSIEM 402 (438)
Q Consensus 352 p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~-----------------------------~a~~fY~k~GF~~~g~~~ 402 (438)
|+|||+|||++|++++++++++.|++.+.+.+. .+.+||+|+||+..+...
T Consensus 80 p~~rg~GiG~~ll~~~~~~~~~~g~~~i~l~~~~~n~~s~~~~~~~~~~~~~~~~~v~n~~~~a~~~y~k~GF~~~~~~~ 159 (180)
T 1n71_A 80 SSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVLP 159 (180)
T ss_dssp TTSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHHHHHHTCCBSSCCTHHHHHHTTCEEEEEET
T ss_pred cccccCCHHHHHHHHHHHHHHHCCCcEEEEEecCCcccccccccccccccchhhhhhcccchHHHHHHHHcCcEEEeeec
Confidence 999999999999999999999999999999871 468999999999988653
Q ss_pred cchHhhhhhcCCCCceEEEEccCC
Q 013702 403 IPEERRKRINLSRNSKYYMKKLLP 426 (438)
Q Consensus 403 lp~~~~~~y~~~r~s~~~~k~ll~ 426 (438)
. |.....+.++|.+.+.
T Consensus 160 ~-------~~~~~~~~~~m~k~l~ 176 (180)
T 1n71_A 160 N-------ANGWDKPDIWMAKTII 176 (180)
T ss_dssp T-------TTSTTCCEEEEEEECS
T ss_pred c-------cCCCCCCcEEEEecCC
Confidence 1 2223346677766553
|
| >2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii} | Back alignment and structure |
|---|
Probab=99.66 E-value=6.2e-17 Score=157.43 Aligned_cols=128 Identities=16% Similarity=0.118 Sum_probs=105.1
Q ss_pred eeCHHHHHHHhcCCceEEEcCc-ccC--CC-CC-eeecChHHHHHHHHHHcCCCEEEEEecCccc---cC------CCcc
Q 013702 67 KVDVTRMRERLDGGCLVILSNL-GYS--SS-GE-VLNCNTYEVATACALAIEADKLICIIDGPIL---DE------SGHL 132 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i-~~~--~~-g~-~~ninaD~~A~~lA~aL~A~~li~ltdv~g~---~~------~~~~ 132 (438)
..+.+.|+.||++|.|||++++ +.+ +. |. ++|+|+|++|+.+|.+|+||+|+|+|||+|+ || ++++
T Consensus 131 ~~~~~~i~~lL~~g~IpVi~~~~~~~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a~~ 210 (276)
T 2ogx_A 131 PTVADQLAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARF 210 (276)
T ss_dssp HHHHHHHHHHHHHSSEEEEESSCTTGGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGCCE
T ss_pred cChHHHHHHHHhCCCEEEEcCCcccccccccCCcCCCCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCCeE
Confidence 3478899999999999999994 444 32 44 4899999999999999999999999999987 33 2899
Q ss_pred cccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccc
Q 013702 133 IRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSE 212 (438)
Q Consensus 133 i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 212 (438)
|++++.+|+.+++ + +| |
T Consensus 211 i~~i~~~e~~~~~--g-------------------------------------------------------~g-g----- 227 (276)
T 2ogx_A 211 LPETSATDLAKSE--G-------------------------------------------------------PL-P----- 227 (276)
T ss_dssp ESEEEHHHHHTSC--S-------------------------------------------------------CC-S-----
T ss_pred cceeCHHHHHHHh--C-------------------------------------------------------cC-C-----
Confidence 9999998877663 2 22 3
Q ss_pred ccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccCC
Q 013702 213 QGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASD 275 (438)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~d 275 (438)
|.+|+.++..+++.|+ ++||+|++.++.+ .+++++++.||.|.++
T Consensus 228 ----------------M~~K~~~~~~~~~~~~-~v~I~~g~~~~~l-~~~l~g~~~GT~i~~~ 272 (276)
T 2ogx_A 228 ----------------VDRALLDVMATARHIE-RVQVVNGLVPGRL-TAALRGEHVGTLIRTG 272 (276)
T ss_dssp ----------------SCHHHHHHHHTCSSCC-EEEEEETTSTTHH-HHHHTTCCCSEEEECS
T ss_pred ----------------hHHHHHHHHHHhcCCC-eEEEEECCCccHH-HHHHcCCCCceEEccC
Confidence 8999988877777666 7999999999976 5677888899999865
|
| >3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-15 Score=136.57 Aligned_cols=128 Identities=14% Similarity=0.109 Sum_probs=102.9
Q ss_pred CCceeEEEECCccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhc----------CcEEEEEECCEEEEEEEEeeecC---
Q 013702 274 SDLYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL----------DSFYVVEREGQIIACAALFPFFK--- 339 (438)
Q Consensus 274 ~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~----------~~~~V~~~dg~iVG~~~l~~~~~--- 339 (438)
.++.+.||+++.+|++.+.+++.......+. .+.+.+.+..++ ..++++..++++||++.+.....
T Consensus 20 ~~M~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~~~~~~~ 99 (183)
T 3i9s_A 20 QGMSVEIKRVDKHHCLDLVGIFIELERYYFGDKAASEQDLANYLSHQVFSEHSGVKVIAAVEHDKVLGFATYTIMFPAPK 99 (183)
T ss_dssp ---CCEEEECCGGGGGGGHHHHHHHHHHHHGGGCCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEEEEESCCGG
T ss_pred cCCeeEEEEcCHhHHHHHHHHHHHHHHHhccCccccHHHHHHHHHHhhhccCCCceEEEEEECCEEEEEEEEEEecCCCC
Confidence 3566899999999999999999876544332 234555554432 23788899999999999875432
Q ss_pred -CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 340 -EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 340 -~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
...++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 100 ~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 166 (183)
T 3i9s_A 100 LSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITHNCQRLDWTAESTNPTAGKFYKSIGASLIREK 166 (183)
T ss_dssp GCEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHHTTCEECTTE
T ss_pred CCCeEEEEeEEECHhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCChHHHHHHHHcCCceeccc
Confidence 36789999999999999999999999999999999999998887 478999999999998743
|
| >3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A | Back alignment and structure |
|---|
Probab=99.65 E-value=8.5e-16 Score=133.90 Aligned_cols=124 Identities=21% Similarity=0.309 Sum_probs=100.4
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---------CcEEEEEECCEEEEEEEEeeec-----CC
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFF-----KE 340 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---------~~~~V~~~dg~iVG~~~l~~~~-----~~ 340 (438)
.+.+.||+++++|++.+.+++....... +++.+.+...+ ..++++..++++||++.+.... ..
T Consensus 18 ~~~~~ir~~~~~D~~~i~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 94 (161)
T 3i3g_A 18 GVDLELRVLEESDLSSHLELLGHLTEAP---PLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTRGGR 94 (161)
T ss_dssp -CCEEEEECCGGGHHHHHHHHTTTSCCC---CCCHHHHHHHHHHHHHTTCEEEEEEETTTTEEEEEEEEEEECCSSGGGC
T ss_pred CccEEEEECcHhhHHHHHHHHHHhccCC---CCCHHHHHHHHHHHhhcCCceEEEEEEcCCCeEEEEEEEeccCCCCCCc
Confidence 3457899999999999999977644332 34555544432 2356677789999999998532 35
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
..++|..++|+|+|||+|||++|++.+++++++.|+..+.+.+ ..+.+||+|+||+..+..
T Consensus 95 ~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 156 (161)
T 3i3g_A 95 AVGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEKSLPFYEKLGFRAHERQ 156 (161)
T ss_dssp CEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCSEEEEEECTTTHHHHHHTTCEEEEEE
T ss_pred cEEEEEEEEEcHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEecccchhHHHhcCCeecCce
Confidence 7899999999999999999999999999999999999999988 456899999999998754
|
| >1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-15 Score=130.85 Aligned_cols=124 Identities=15% Similarity=0.199 Sum_probs=93.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHH--HcCc-CCcCCHHH----HHhh---c-CcEEEEEECCEEEEEEEEeeecC-----C
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLV--ESGA-LVRRTDEE----LLKA---L-DSFYVVEREGQIIACAALFPFFK-----E 340 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~--~~~~-~~~~~~e~----l~~~---~-~~~~V~~~dg~iVG~~~l~~~~~-----~ 340 (438)
.+.||+++++|++.+.+++.... .... ...+..+. +... . ..+++++.++++||++.+..... .
T Consensus 4 ~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~ 83 (153)
T 1z4e_A 4 HVTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGS 83 (153)
T ss_dssp CCEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHC
T ss_pred cEEEEECCHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHcCCCeeEEEEecCCcEEEEEEEEecCCcccCCc
Confidence 36899999999999999987521 1111 11111111 2111 1 34678888999999998764321 2
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
..++|..++|+|+|||||||++|+++++++|++.|+..+.+.+ ..+.+||+|+||+..+.
T Consensus 84 ~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~~~ 147 (153)
T 1z4e_A 84 WRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHE 147 (153)
T ss_dssp EEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTCEEEEE
T ss_pred cceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHHcCCceece
Confidence 4578999999999999999999999999999999999998887 47999999999998754
|
| >3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.9e-15 Score=128.64 Aligned_cols=127 Identities=16% Similarity=0.145 Sum_probs=97.5
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCCcCC----HHHHHhhc-----CcEEEEEECCEEEEEEEEeeec----CCC
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRT----DEELLKAL-----DSFYVVEREGQIIACAALFPFF----KEK 341 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~----~e~l~~~~-----~~~~V~~~dg~iVG~~~l~~~~----~~~ 341 (438)
.+.+.||+++++|++.+.+++..........+.+ .+.+...+ ..++++..++++||++.+.+.. ...
T Consensus 4 ~~~~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 83 (157)
T 3dsb_A 4 EELIEIREARMDDLDTIAKFNYNLAKETEGKELDMDVLTKGVKALLLDERKGKYHVYTVFDKVVAQIMYTYEWSDWRNGN 83 (157)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCGGGCEEEEEEETTEEEEEEEEEEEEETTTTEE
T ss_pred CceEEEEeCCHHHHHHHHHHHHHHHHHHhcCCCCcchhHHHHHHHHhCcCcceEEEEEeCCcEEEEEEEEEeccccCCCc
Confidence 3567899999999999999877764321111222 22222211 3577888899999999986422 224
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC-CCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g-~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.+++..++|+|+|||+|+|++|++++++++++.+ ++.+.+.+ ..+.+||+|+||+..+..
T Consensus 84 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 148 (157)
T 3dsb_A 84 FLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNMYECDYN 148 (157)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEEEEETTCTTHHHHHHTTTCEECSEE
T ss_pred eEEEEEEEECHHHhcCCHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHCCCEEecce
Confidence 5679999999999999999999999999999999 88888877 479999999999998754
|
| >3bln_A Acetyltransferase GNAT family; NP_981174.1, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE MRD GOL; 1.31A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.64 E-value=6.1e-15 Score=125.82 Aligned_cols=117 Identities=20% Similarity=0.275 Sum_probs=95.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 354 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~y 354 (438)
++.||+++++|++.+.+++...... ++..+.+...+ ..++++..++++||++.+.+. ..+..++..++|+|+|
T Consensus 2 m~~ir~~~~~D~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~v~p~~ 76 (143)
T 3bln_A 2 MKNVTKASIDDLDSIVHIDIDVIGN----DSRRNYIKHSIDEGRCVIVKEDNSISGFLTYDTN-FFDCTFLSLIIVSPTK 76 (143)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHSS----STTHHHHHHHHHTTCEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEECTTC
T ss_pred ceeEEECCHhhHHHHHHHHHHccCc----hhHHHHHHHHhCCCeEEEEEeCCeEEEEEEEEec-CCCceEEEEEEECHHH
Confidence 3689999999999999998766543 34445554443 467888999999999999854 3567889999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 355 RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
||+|+|++|++.+++++++.+ +.+.+ ..+.+||+|+||+..+..
T Consensus 77 rg~Gig~~ll~~~~~~~~~~~---i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 124 (143)
T 3bln_A 77 RRRGYASSLLSYMLSHSPTQK---IFSSTNESNESMQKVFNANGFIRSGIV 124 (143)
T ss_dssp CSSCHHHHHHHHHHHHCSSSE---EEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCChHHHHHHHHHHHHhhCC---eEEEEcccCHHHHHHHHHCCCeEeeEE
Confidence 999999999999999998766 44444 579999999999998765
|
| >2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A | Back alignment and structure |
|---|
Probab=99.64 E-value=6.7e-15 Score=130.51 Aligned_cols=145 Identities=19% Similarity=0.174 Sum_probs=105.2
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcC----CcCCHHHHHhhc-------CcEEEE-EECCEEEEEEEEeeecC----C
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFK----E 340 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~~-------~~~~V~-~~dg~iVG~~~l~~~~~----~ 340 (438)
.+.||+++++|++.+.+++......... .+.+.+.+..++ ..++++ ..++++||++.+..... .
T Consensus 2 ~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~ 81 (172)
T 2j8m_A 2 SASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDARARQGYPILVASDAAGEVLGYASYGDWRPFEGFR 81 (172)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHCSSSSCCCCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGGT
T ss_pred ceEEEECCHHHHHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHhhcccCceEEEEEcCCCeEEEEEEEecccCCcccC
Confidence 3679999999999999999876543221 233444433322 246666 56799999999875422 1
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCC
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRN 416 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~ 416 (438)
..+++ .++|+|+|||||||++|++.++++|++.|+..+.+.+ ..+.+||+|+||+..+...-.. ..+....
T Consensus 82 ~~~~~-~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~----~~~g~~~ 156 (172)
T 2j8m_A 82 GTVEH-SVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVG----QKFGRWL 156 (172)
T ss_dssp TEEEE-EEEECTTCTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEE
T ss_pred ceEEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCccEEEEEEcCCCHHHHHHHHHCCCEEEeeccccc----eecCEEe
Confidence 34454 7999999999999999999999999999999999877 4799999999999988532110 0112234
Q ss_pred ceEEEEccCC
Q 013702 417 SKYYMKKLLP 426 (438)
Q Consensus 417 s~~~~k~ll~ 426 (438)
+.++|.+.++
T Consensus 157 d~~~m~~~~~ 166 (172)
T 2j8m_A 157 DLTFMQLNLD 166 (172)
T ss_dssp EEEEEEEESC
T ss_pred EHHHHHhhhc
Confidence 5677777765
|
| >2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-14 Score=129.17 Aligned_cols=125 Identities=18% Similarity=0.171 Sum_probs=98.7
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC-------CcCCHHHHHhhc--------CcEEEEEECCEEEEEEEEeeecC-
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK- 339 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~-------~~~~~e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~~~- 339 (438)
+.+.||+++++|++.+.+++......... .+++.++...++ ..++++..++++||++.+.....
T Consensus 3 ~~l~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~ 82 (172)
T 2i79_A 3 YELLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRK 82 (172)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHHTTCSSSSCCTTCCCCCHHHHHHHHHHHHHCSSCEEEEEEETTEEEEEEEEECCCST
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHhhcCcccccCCccccCCHHHHHHHHHHhhcCCCcEEEEEEECCEEEEEEEEEecCCC
Confidence 34689999999999999999876543211 123555433332 34678888999999999875432
Q ss_pred --CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC-CCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 340 --EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG-LDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 340 --~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g-~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
...+++ .++|+|+|||||||++|++.++++|++.+ ++++.+.+ .+|++||+|+||+..+..
T Consensus 83 ~~~~~~~~-~~~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~A~~~yek~GF~~~g~~ 150 (172)
T 2i79_A 83 RVRHIGDL-FIVIGKRYWNNGLGSLLLEEAIEWAQASGILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQ 150 (172)
T ss_dssp TTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSSCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred ccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHCCCEEEeEE
Confidence 345666 69999999999999999999999999988 99999888 489999999999998854
|
| >3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-16 Score=153.72 Aligned_cols=140 Identities=16% Similarity=0.163 Sum_probs=112.8
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ ++++++.+.+.++ ++ .+|.+.+ .+|++|.|||+++. .|. .++|+|
T Consensus 134 ~L~~~Gi~----a~~~~~~~~~~~~-~~----------------~~~~~~l-~lL~~g~IpVv~g~----~g~-~~~~~D 186 (281)
T 3nwy_A 134 FLEKEGIV----TRVQTAITMGQVA-EP----------------YLPLRAV-RHLEKGRVVIFGAG----MGL-PYFSTD 186 (281)
T ss_dssp HHHHTTCC----EEEEESSCCGGGS-EE----------------CCHHHHH-HHHHTTCEEEEEST----TSS-TTCCHH
T ss_pred HHHHcCCC----EEEEecccccccc-cc----------------cchHHHH-HHHHcCCeEEEECC----CCC-CCCCHH
Confidence 67888875 8888888776654 11 2566777 79999999999982 333 359999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCC
Q 013702 103 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 175 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (438)
++|+.+|.+|+||+|+|+|||+|++ +++++|++++..|+.+ .+
T Consensus 187 ~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~A~~i~~is~~e~~~---~g--------------------------- 236 (281)
T 3nwy_A 187 TTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLD---RG--------------------------- 236 (281)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSSCBCC-----CCCCBCSEECHHHHHT---TT---------------------------
T ss_pred HHHHHHHHHcCCCEEEEeeccCccccCCCCcCCCCeEcccccHHHHHH---cC---------------------------
Confidence 9999999999999999999999873 3478999999987522 11
Q ss_pred CccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 013702 176 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 255 (438)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~ 255 (438)
+ |..|+.+|..|+++|++ ++|+|++.|
T Consensus 237 -------------------------------~---------------------~v~k~~Aa~~a~~~Gi~-v~I~~g~~p 263 (281)
T 3nwy_A 237 -------------------------------L---------------------RVADATAFSLCMDNGMP-ILVFNLLTD 263 (281)
T ss_dssp -------------------------------C---------------------CSSCHHHHHHHHTTTCC-EEEEETTST
T ss_pred -------------------------------C---------------------CcHHHHHHHHHHHCCCe-EEEecCCCc
Confidence 1 44588999999999997 999999999
Q ss_pred ceeeeehhhcCCCccccc
Q 013702 256 GVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 256 ~~ll~el~~~~g~GT~i~ 273 (438)
+.| .++|++++.||.|.
T Consensus 264 ~~l-~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 264 GNI-ARAVRGEKIGTLVT 280 (281)
T ss_dssp THH-HHHHHTCCCSEEEC
T ss_pred hHH-HHHHcCCCCceEEe
Confidence 975 58999999999985
|
| >2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=3.3e-15 Score=131.16 Aligned_cols=140 Identities=21% Similarity=0.228 Sum_probs=106.2
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHH-------------HHhhc--CcEEEEEECCEEEEEEEEeeecCCC
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE-------------LLKAL--DSFYVVEREGQIIACAALFPFFKEK 341 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~-------------l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~ 341 (438)
.+.||+++++|++.+.+++...+........+.+. +...+ ..+++++.++++||++.+. .
T Consensus 7 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~-----~ 81 (172)
T 2fiw_A 7 TPALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLK-----G 81 (172)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEE-----T
T ss_pred CcEEEECchhhHHHHHHHHHHHHHHhccccCCHHHHHHHHhhccCHHHHHHHhcCCeEEEEEECCEEEEEEEEe-----c
Confidence 36899999999999999998765543322223222 22221 3578888999999999997 2
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEE
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 420 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~ 420 (438)
.+++..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+....+. +....+.+.
T Consensus 82 ~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~n~~a~~~y~k~GF~~~~~~~~~~------~g~~~~~~~ 155 (172)
T 2fiw_A 82 PDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRNTVSI------NGEWLANTT 155 (172)
T ss_dssp TTEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCEEEEEEEEEE------TTEEEEEEE
T ss_pred CcEEEEEEECccccCcCHHHHHHHHHHHHHHhcCCcEEEEEeCHHHHHHHHHcCCEEecceeEeE------CCEEeeeEE
Confidence 357889999999999999999999999999999999999887 5789999999999987654321 222335577
Q ss_pred EEccCCC
Q 013702 421 MKKLLPD 427 (438)
Q Consensus 421 ~k~ll~~ 427 (438)
|.+.+++
T Consensus 156 ~~~~l~~ 162 (172)
T 2fiw_A 156 MTKSLAD 162 (172)
T ss_dssp EEEEC--
T ss_pred EEEeccc
Confidence 7776654
|
| >2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp} | Back alignment and structure |
|---|
Probab=99.64 E-value=5e-15 Score=130.58 Aligned_cols=141 Identities=16% Similarity=0.152 Sum_probs=106.0
Q ss_pred ceeEEEE-CCccCHHHHHHHHHHHHHcCcCCc---CCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeec-CCCeE
Q 013702 276 LYEGTRT-AKVTDLSGIKQIIQPLVESGALVR---RTDEELLKAL-------DSFYVVEREGQIIACAALFPFF-KEKCG 343 (438)
Q Consensus 276 ~~~~IR~-at~~D~~~I~~L~~~~~~~~~~~~---~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~-~~~~~ 343 (438)
+.+.||+ ++++|++.+.+++... ..+... ...+.+..++ ..+++++.++++||++.+.... ....+
T Consensus 18 ~~~~ir~~~~~~D~~~i~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 95 (177)
T 2r7h_A 18 GAVAFRRQVLPQDALLVRRVVEST--GFFTPEEADVAQELVDEHLMHGAACGYHFVFATEDDDMAGYACYGPTPATEGTY 95 (177)
T ss_dssp -CEEEECSCCTTHHHHHHHHHHHT--SCSCHHHHHHHHHHHHHHHTC--CCSCEEEEEEETTEEEEEEEEEECTTSSSEE
T ss_pred cceEEccCCCHHHHHHHHHHHHhh--CccCcchhhhHHHHHHHHHhhccCCCeEEEEEEECCeEEEEEEEEeccCCCCeE
Confidence 3478999 9999999999998763 111111 2233343333 1467888999999999998653 24789
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCc
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 417 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s 417 (438)
+|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+...- .|. ...+
T Consensus 96 ~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~~~~------~~~-~g~~ 168 (177)
T 2r7h_A 96 DLYWIAVAPHRQHSGLGRALLAEVVHDVRLTGGRLLFAETSGIRKYAPTRRFYERAGFSAEAVLKA------FYR-AGDD 168 (177)
T ss_dssp EEEEEEECTTTTTTTHHHHHHHHHHHHHHHTTCCEEEEEEECSGGGHHHHHHHHHTTCEEEEEEEE------EEE-TTEE
T ss_pred EEEEEEECHHHhCCCHHHHHHHHHHHHHHhcCCCEEEEEeccccccHHHHHHHHHcCCEeccccHh------HHh-CCCc
Confidence 9999999999999999999999999999999999998866 37899999999999876421 111 2345
Q ss_pred eEEEEccC
Q 013702 418 KYYMKKLL 425 (438)
Q Consensus 418 ~~~~k~ll 425 (438)
.+.|.+.+
T Consensus 169 ~~~~~~~l 176 (177)
T 2r7h_A 169 KIIYRLEV 176 (177)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 66666654
|
| >1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-14 Score=127.72 Aligned_cols=124 Identities=20% Similarity=0.268 Sum_probs=101.7
Q ss_pred eEEEECCccC----HHHHHHHHHHHHHcC----cCCcCCHHHHHhhc-----------CcEEEEEECCEEEEEEEEeeec
Q 013702 278 EGTRTAKVTD----LSGIKQIIQPLVESG----ALVRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFF 338 (438)
Q Consensus 278 ~~IR~at~~D----~~~I~~L~~~~~~~~----~~~~~~~e~l~~~~-----------~~~~V~~~dg~iVG~~~l~~~~ 338 (438)
+.||+++++| ++.+.+++...+... +..+++.+.....+ ..++++..++++||++.+.+..
T Consensus 4 ~~ir~~~~~D~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~ 83 (177)
T 1ghe_A 4 AQLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQ 83 (177)
T ss_dssp CEEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECC
T ss_pred eEEEeCChHHhHhHHHHHHHHHHHHhhccCcccccCCCCHHHHHHHHHHHHHhhcCCceEEEEEecCCEEEEEEEEEecc
Confidence 6799999999 999999998876653 23344554433222 2478888999999999998643
Q ss_pred ---CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHHCCCeEecee
Q 013702 339 ---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 339 ---~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k~GF~~~g~~ 401 (438)
....++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ +.+.+||+|+||+..+..
T Consensus 84 ~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~Gf~~~~~~ 152 (177)
T 1ghe_A 84 KPNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGEL 152 (177)
T ss_dssp STTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHTTCEEEEEE
T ss_pred CCCCcceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccCCHHHHHHHHcCCEEcccc
Confidence 235899999999999999999999999999999999999999887 369999999999998764
|
| >1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-14 Score=129.10 Aligned_cols=146 Identities=21% Similarity=0.158 Sum_probs=104.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc----CCcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecC----CC
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK----EK 341 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~----~~ 341 (438)
.+.||+++++|++.+.+++........ ..+.+.+.+..++ ..++++..++++||++.+.+... ..
T Consensus 4 ~i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~ 83 (175)
T 1yr0_A 4 SVELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRH 83 (175)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTT
T ss_pred EEEEecCCHhHHHHHHHHHHHHHhcCcccccccCCCHHHHHHHHHhhcccCceEEEEEeCCcEEEEEEEecccCccccCc
Confidence 367999999999999999987654322 1234454433322 34677778999999999875422 12
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCc
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 417 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s 417 (438)
..++ .++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+...-.. ..+....+
T Consensus 84 ~~~~-~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~----~~~g~~~d 158 (175)
T 1yr0_A 84 TREH-SVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGRFSEVG----TKFGRWLD 158 (175)
T ss_dssp EEEE-EEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEE
T ss_pred eEEE-EEEECccccCCCHHHHHHHHHHHHHHhCCccEEEEEecCCCHHHHHHHHHCCCEEEEEccccc----ccCCEEEE
Confidence 3444 7999999999999999999999999999999998876 5799999999999987532110 11222345
Q ss_pred eEEEEccCCC
Q 013702 418 KYYMKKLLPD 427 (438)
Q Consensus 418 ~~~~k~ll~~ 427 (438)
.++|.+++++
T Consensus 159 ~~~~~~~~~~ 168 (175)
T 1yr0_A 159 LTCMELKLGE 168 (175)
T ss_dssp EEEEEEEC--
T ss_pred HHHHHHHHhc
Confidence 6777666654
|
| >1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=4.7e-15 Score=129.90 Aligned_cols=126 Identities=16% Similarity=0.070 Sum_probs=100.5
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeee-------cCCCeE
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPF-------FKEKCG 343 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~-------~~~~~~ 343 (438)
...+.||+++.+|++.+.+++...+...... ...+.+...+ ..++++++++++||++.+... .....+
T Consensus 18 ~~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~ 96 (165)
T 1s3z_A 18 GSHMDIRQMNKTHLEHWRGLRKQLWPGHPDD-AHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVV 96 (165)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHHSTTSCHH-HHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEE
T ss_pred CceEEEEeCchhhHHHHHHHHHHHhccCCcH-HHHHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccccccccCCCcE
Confidence 4557899999999999999988765433211 0112233332 357888899999999999852 134789
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+|..++|+|+|||+|||++|++.+++++++.|+..+.+.+ ..+.+||+|+||+..+..
T Consensus 97 ~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 158 (165)
T 1s3z_A 97 FLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERV 158 (165)
T ss_dssp EEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEEChhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCcCCHHHHHHHHHcCCeEeeeE
Confidence 9999999999999999999999999999999999999888 478999999999998754
|
| >1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3 | Back alignment and structure |
|---|
Probab=99.63 E-value=4.5e-16 Score=148.02 Aligned_cols=140 Identities=17% Similarity=0.119 Sum_probs=109.7
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ ++++++.+.+.+. .| .++.+.+ .+|+.|.|||++.. .|. .++|+|
T Consensus 92 ~l~~~G~~----~~~~~~~~~~~~~---------~~--------~~~~~~~-~ll~~g~ipVv~g~----~g~-~~~~~D 144 (239)
T 1ybd_A 92 AFETLGIK----ARVQSALSMQQIA---------ET--------YARPKAI-QYLEEGKVVIFAAG----TGN-PFFTTD 144 (239)
T ss_dssp HHHHTTCC----EEEEESSCBSSSC---------EE--------CCHHHHH-HHHHTTCEEEEEST----TSS-TTCCHH
T ss_pred HHHHcCCC----eEEEeeecccccc---------cc--------hhHHHHH-HHHhCCcEEEEECC----ccC-CCCCcH
Confidence 56666765 8888887653321 01 2467777 89999999999832 232 359999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCC
Q 013702 103 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 175 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (438)
++|+.+|.+|+||+|+|+|||+|+. |++++|++++.+|+.++ +.
T Consensus 145 ~~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~-------------------------- 195 (239)
T 1ybd_A 145 TAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLK---NL-------------------------- 195 (239)
T ss_dssp HHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHT---TC--------------------------
T ss_pred HHHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHHh---cc--------------------------
Confidence 9999999999999999999999873 34679999999887654 21
Q ss_pred CccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 013702 176 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 255 (438)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~ 255 (438)
+ + | |+++|..|++.|++ +||+|++.|
T Consensus 196 -----------------------------~-~---------------------m--~~~a~~~a~~~gv~-v~I~~~~~~ 221 (239)
T 1ybd_A 196 -----------------------------K-V---------------------M--DATAFALCRERKLN-IVVFGIAKE 221 (239)
T ss_dssp -----------------------------C-S---------------------S--CHHHHHHHHHTTCC-EEEECTTST
T ss_pred -----------------------------c-c---------------------c--CHHHHHHHHHcCCc-EEEEeCCCh
Confidence 1 2 5 67799999999998 999999999
Q ss_pred ceeeeehhhcCCCccccc
Q 013702 256 GVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 256 ~~ll~el~~~~g~GT~i~ 273 (438)
+.+ .++|++++.||.|.
T Consensus 222 ~~l-~~~l~g~~~GT~i~ 238 (239)
T 1ybd_A 222 GSL-KRVITGEDEGTLVH 238 (239)
T ss_dssp THH-HHHHHTCSCSEEEE
T ss_pred hHH-HHHHcCCCCCeEEc
Confidence 976 58999989999985
|
| >3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-15 Score=129.03 Aligned_cols=121 Identities=16% Similarity=0.239 Sum_probs=90.6
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--------CcEEEEEECCEEEEEEEEeeec----CCCeE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF----KEKCG 343 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~~----~~~~~ 343 (438)
+.+.||+++++|++.+.+++.... .+++.+.+...+ ..+++++.++++||++.+.+.. ....+
T Consensus 7 ~~~~ir~~~~~D~~~i~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~ 81 (150)
T 3t9y_A 7 ITRLFNNSDFEKLNQLCKLYDDLG-----YPTNENDLKKRLKKITNHDDYFLLLLIKENKIIGLSGMCKMMFYEKNAEYM 81 (150)
T ss_dssp EEEECCGGGGGCHHHHHHHHHHHT-----CCCCHHHHHHHHHHHHTSTTEEEEEEEETTEEEEEEEEEEEECSSSSCEEE
T ss_pred hHHHHHhcCHHHHHHHHHHHHHhC-----CCCCHHHHHHHHHHhhcCCceEEEEEEECCEEEEEEEEEEeccccccCCEE
Confidence 457899999999999999986641 234444443322 3468888999999999988643 34688
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcH------HHHHHHHHCCCeEecee
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT------RTADWFKSRGFRECSIE 401 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~------~a~~fY~k~GF~~~g~~ 401 (438)
+|..++|+|+|||+|||++|++.+++++++.|++.+.+.+. .+.+||+|+||+..+..
T Consensus 82 ~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~GF~~~~~~ 145 (150)
T 3t9y_A 82 RILAFVIHSEFRKKGYGKRLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYVSNTSG 145 (150)
T ss_dssp EEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSCEEECCCCCC------------CCCCCCCC
T ss_pred EEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcCCEEecce
Confidence 99999999999999999999999999999999999988763 58999999999987654
|
| >2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.6e-16 Score=150.38 Aligned_cols=140 Identities=9% Similarity=0.083 Sum_probs=108.5
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ ++++++.+... .+ +. .++.+. ..||+.|.|||++| ..|.. .+++|
T Consensus 108 ~l~~~Gi~----a~~~~~~t~~~-----------~~-----~~-~~~~~~-~~lL~~g~IpVi~~----~~g~~-~~~~D 160 (256)
T 2va1_A 108 ALNHLNVN----TIVLSAIKCDK-----------LV-----HE-SSANNI-KKAIEKEQVMIFVA----GTGFP-YFTTD 160 (256)
T ss_dssp HHHTTTCC----EEEEESSCCTT-----------TC-----EE-CCHHHH-HHHHHTTCEEEEES----TTSSS-SCCHH
T ss_pred HHHHcCCC----eEEEeeeeccc-----------cc-----ch-hhHHHH-HHHHhCCcEEEEEC----CCCCC-CCChh
Confidence 56677765 88888664321 11 11 356666 78999999999998 23433 57899
Q ss_pred HHHHHHHHHcCCCEEEEEec-Ccccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCC
Q 013702 103 EVATACALAIEADKLICIID-GPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSD 174 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltd-v~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (438)
++|+.+|.+|+||+|+|+|| |+|++ |++++|++++.+|++++ +.
T Consensus 161 ~~Aa~lA~~l~Ad~LiilTD~VdGVy~~dP~~~p~a~~i~~is~~e~~~~---~~------------------------- 212 (256)
T 2va1_A 161 SCAAIRAAETESSIILMGKNGVDGVYDSDPKINPNAQFYEHITFNMALTQ---NL------------------------- 212 (256)
T ss_dssp HHHHHHHHHHTCSEEEEEESSCCSBCSCC--------CBSEEEHHHHHHH---TC-------------------------
T ss_pred HHHHHHHHhCCCCEEEEeecccCeEEcCCCCCCCCCEEccEEcHHHHHHh---cc-------------------------
Confidence 99999999999999999999 99873 34899999999998776 21
Q ss_pred CCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeecccc
Q 013702 175 SIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTI 254 (438)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~ 254 (438)
| | | |+++|..|++.|++ ++|+|++.
T Consensus 213 ------------------------------~-~---------------------m--k~~aa~~a~~~gv~-v~I~~g~~ 237 (256)
T 2va1_A 213 ------------------------------K-V---------------------M--DATALALCQENNIN-LLVFNIDK 237 (256)
T ss_dssp ------------------------------C-S---------------------S--CHHHHHHHHHTTCE-EEEEESSS
T ss_pred ------------------------------C-C---------------------c--cHHHHHHHHHCCCe-EEEEeCCC
Confidence 1 3 7 89999999999997 99999999
Q ss_pred CceeeeehhhcCCCccccc
Q 013702 255 GGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 255 ~~~ll~el~~~~g~GT~i~ 273 (438)
|+.+ .++|++++.||.|.
T Consensus 238 ~~~l-~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 238 PNAI-VDVLEKKNKYTIVS 255 (256)
T ss_dssp TTHH-HHHHTTCSCEEEEE
T ss_pred chHH-HHHHcCCCCeEEEe
Confidence 9976 58999988999985
|
| >4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.2e-14 Score=128.99 Aligned_cols=128 Identities=18% Similarity=0.212 Sum_probs=99.6
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc-------CCcCCHHH----HHhhc--CcEEEEEE--CCEEEEEEEEeeec---
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA-------LVRRTDEE----LLKAL--DSFYVVER--EGQIIACAALFPFF--- 338 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~-------~~~~~~e~----l~~~~--~~~~V~~~--dg~iVG~~~l~~~~--- 338 (438)
++.||+++++|++.+.+++...+.... ..+...+. +...+ ..++++.+ +|++||++.+....
T Consensus 6 ~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~ivG~~~~~~~~~~~ 85 (217)
T 4fd4_A 6 SIVLRVARLDELEQVREILHRIYYPEEGITISYVHGKSHTLDDERFSLSFVEQGTVVVAEDSAAKKFIGVSIAGPIQPGD 85 (217)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHTTTTCHHHHHBTTCSSCCHHHHHHHHTTTTTTCEEEEEETTTTEEEEEEEEEEECTTH
T ss_pred ceEEEEcCHHHHHHHHHHHHHhcCCccchhhhccCCCccHHHHHHHHHHHHHCCCeEEEEECCCCCEEEEEEeeccCccc
Confidence 368999999999999999987632111 11111122 22222 45788888 89999999886532
Q ss_pred -------------------------------------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 013702 339 -------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 381 (438)
Q Consensus 339 -------------------------------------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l 381 (438)
....++|..++|+|+|||+|||++|+++++++|++.|+..+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~~ 165 (217)
T 4fd4_A 86 PDAMVEEAATTETKKWGDILKLLALLERTADVCGRYGLEKAYHVHILAVDPTYRGHSLGQRLLQFQMDLSKKLGFKAISG 165 (217)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCHHHHHTCSCEEEEEEEEECTTSCSSCHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHhhhhhcChhHHHHHHHHHHHHhcccHHHHcCCCceEEEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEE
Confidence 3467889999999999999999999999999999999999988
Q ss_pred Ec--HHHHHHHHHCCCeEeceeccc
Q 013702 382 LT--TRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 382 ~t--~~a~~fY~k~GF~~~g~~~lp 404 (438)
.+ ..+.+||+|+||+..+...+.
T Consensus 166 ~~~n~~a~~~Y~k~GF~~~~~~~~~ 190 (217)
T 4fd4_A 166 DFTSVFSVKLAEKLGMECISQLALG 190 (217)
T ss_dssp EECSHHHHHHHHHTTCEEEEEEEGG
T ss_pred EeCCHHHHHHHHHCCCeEEEeEeHH
Confidence 66 689999999999999875444
|
| >1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E* | Back alignment and structure |
|---|
Probab=99.62 E-value=8e-15 Score=133.64 Aligned_cols=125 Identities=17% Similarity=0.135 Sum_probs=103.9
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc-CCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeec-------------
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF------------- 338 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~-~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~------------- 338 (438)
.+.||+++.+|++.+.++....+.... ..+++.+.+...+ ..++++++++++||++.+....
T Consensus 34 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~ 113 (207)
T 1kux_A 34 ANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHR 113 (207)
T ss_dssp SCEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCC
T ss_pred CeEEecCCHHHHHHHHHHHHHHcCCcccccccCHHHHHHHHhhCCCeEEEEEECCEEEEEEEEEeecccccccccccccC
Confidence 468999999999999999877544311 2355666665554 4688899999999999987543
Q ss_pred -CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 339 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 339 -~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
....++|..++|+|+|||+|||++|++++++++++. |++.+.+.+ ..+.+||+|+||+..+..
T Consensus 114 ~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~k~GF~~~~~~ 179 (207)
T 1kux_A 114 PRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPC 179 (207)
T ss_dssp TTCCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEECGGGHHHHHTTTCEEEEEC
T ss_pred CCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEeecHHHHHHHHHCCCEECCcc
Confidence 247899999999999999999999999999999988 999998877 578999999999999854
|
| >2ozh_A Hypothetical protein XCC2953; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.6e-15 Score=127.85 Aligned_cols=122 Identities=16% Similarity=0.155 Sum_probs=100.5
Q ss_pred eeEEE-ECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcc
Q 013702 277 YEGTR-TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 353 (438)
Q Consensus 277 ~~~IR-~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~ 353 (438)
.+.+| +++++|++.+.+++... ..+..+.+.+.+...+ ..+++++.++++||++.+.+ .....++|..++|+|+
T Consensus 4 ~~~i~~~~~~~D~~~i~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~ 80 (142)
T 2ozh_A 4 HVHVSTDNSLLDIGLIHRTLSQD--TDWAKDIPLALVQRAIDHSLCFGGFVDGRQVAFARVIS-DYATFAYLGDVFVLPE 80 (142)
T ss_dssp CCEEECCGGGCCHHHHHHHHHHH--CSTTTTCCHHHHHHHHHTSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGG
T ss_pred eEEecCCCchhhHHHHHHHHhhc--cccCCCCCHHHHHHHhccCcEEEEEECCEEEEEEEEEe-cCCCcEEEEEEEECHH
Confidence 35676 68999999999998761 2223345556665544 46788888999999999985 3456789999999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEecee
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 401 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~ 401 (438)
|||+|+|++|++.+++++++.|++.+.+.+..+.+||+|+||+..+..
T Consensus 81 ~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~a~~~y~k~GF~~~~~~ 128 (142)
T 2ozh_A 81 HRGRGYSKALMDAVMAHPDLQGLRRFSLATSDAHGLYARYGFTPPLFP 128 (142)
T ss_dssp GTTSSHHHHHHHHHHHCGGGSSCSEEECCCSSCHHHHHTTTCCSCSSG
T ss_pred HcCCCHHHHHHHHHHHHHHhCCCCEEEEecchHHHHHHHCCCEEcCCc
Confidence 999999999999999999999999999888788999999999988653
|
| >2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-14 Score=127.90 Aligned_cols=125 Identities=14% Similarity=0.105 Sum_probs=97.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHc---CcCCcC-------CHHHHHhhc--CcEEEEE-ECCEEEEEEEEeeec-----
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVES---GALVRR-------TDEELLKAL--DSFYVVE-REGQIIACAALFPFF----- 338 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~---~~~~~~-------~~e~l~~~~--~~~~V~~-~dg~iVG~~~l~~~~----- 338 (438)
.+.||+++++|++.+.+++...... .....| +.+.+...+ ..++++. .++++||++.+.+..
T Consensus 13 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~ 92 (179)
T 2oh1_A 13 EFLVRFAAPTDRLKINDLMIDTARWLKESGSTQWSDILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTPSDWDT 92 (179)
T ss_dssp EEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHCCCCTTHHHHHHTTCEEEEECTTCCEEEEEEEESSCCHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCcchhhccccchHHHHHHhhccCcEEEEEecCCeEEEEEEEecCCCcchh
Confidence 5789999999999999998764321 111111 111222222 4577888 889999999987431
Q ss_pred -------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 339 -------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 339 -------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
....++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 93 ~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 166 (179)
T 2oh1_A 93 DLWEDLAIDKAYYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGKK 166 (179)
T ss_dssp HHHGGGTTSCEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cccccCCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEecCCcHHHHHHHHHCCCEEeccc
Confidence 136889999999999999999999999999999999999999887 479999999999998865
|
| >2jdc_A Glyphosate N-acetyltransferase; GNAT; HET: CAO; 1.6A {Bacillus licheniformis} SCOP: d.108.1.1 PDB: 2bsw_A* 2jdd_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=8.4e-15 Score=126.33 Aligned_cols=135 Identities=16% Similarity=0.144 Sum_probs=99.5
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHh---hcCcEEEEEECCEEEEEEEEeeecC-----CCeEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK---ALDSFYVVEREGQIIACAALFPFFK-----EKCGEVAAIG 349 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~---~~~~~~V~~~dg~iVG~~~l~~~~~-----~~~~~I~~v~ 349 (438)
+.||+++++|+..|.++.. ...... +...+.. ....+++++.++++||++.+.+... ...++|..++
T Consensus 2 ~~ir~~~~~D~~~l~~~~~---~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~ 76 (146)
T 2jdc_A 2 IEVKPINAEDTYELRHRIL---RPNQPI--EACMFESDLLRGAFHLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMA 76 (146)
T ss_dssp CEEEEECGGGGHHHHHHHT---CTTSCG--GGGSCGGGGSTTCEEEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHhc---ccCCCc--chhhhhcccCCceEEEEEecCCEEEEEEEEecccccccCCCceEEEEEEE
Confidence 6799999999888776531 111110 0011111 1245788889999999999986432 2388999999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccC
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 425 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll 425 (438)
|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+....+. ...+.++|.+.+
T Consensus 77 V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~~GF~~~~~~~~~~--------~~~~~~~m~k~l 145 (146)
T 2jdc_A 77 TLEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKKLGFSEQGEVFDTP--------PVGPHILMYKRI 145 (146)
T ss_dssp ECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEEEEEECT--------TSCEEEEEEEEC
T ss_pred ECHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEccccHHHHHHHcCCEEecccccCC--------CCCCeEEEEEec
Confidence 9999999999999999999999999999999888 5889999999999987653211 111567776644
|
| >1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=7.4e-15 Score=124.47 Aligned_cols=118 Identities=12% Similarity=0.115 Sum_probs=95.8
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccc
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 354 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~y 354 (438)
+.||. +++|.+.+.+++.... ..+++.+.+...+ ..++++.+++++||++.+.+ .....++|..++|+|+|
T Consensus 2 ~~i~~-~~~d~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~~ 75 (133)
T 1y7r_A 2 VKVTY-DIPTCEDYCALRINAG----MSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVIG-DGGTVFQIVDIAVLKSY 75 (133)
T ss_dssp CEEEC-SCCCHHHHHHHHHHTT----CCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECGGG
T ss_pred eeEEe-cccCHHHHHHHHHhCC----CCCcCHHHHHhhCCcCceEEEEEECCEEEEEEEEEc-cCCCeEEEEEEEEcHHH
Confidence 56777 8999999999987653 2346667776655 23558889999999999874 34568899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHHCCCeEecee
Q 013702 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 355 RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k~GF~~~g~~ 401 (438)
||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 76 rg~Gig~~ll~~~~~~~~~~g~~~~~~~~~~n~~a~~~y~k~Gf~~~~~~ 125 (133)
T 1y7r_A 76 QGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEPD 125 (133)
T ss_dssp CSSSHHHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTTT
T ss_pred hcCchHHHHHHHHHHHHHHcCCCEEEEEEeCCchHHHHHHHcCCeECCCC
Confidence 99999999999999999998877555444 578999999999998654
|
| >1y9w_A Acetyltransferase; structural genomics, Pro structure initiative, PSI, midwest center for structural GE MCSG; 1.90A {Bacillus cereus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=5.6e-15 Score=126.52 Aligned_cols=133 Identities=19% Similarity=0.169 Sum_probs=102.1
Q ss_pred EEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCc
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 358 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqG 358 (438)
.+|+++++|++.+.+++.......+....... .....++++..++++||++.+.+. .+.+++..++|+|+|||+|
T Consensus 5 i~~~~~~~d~~~i~~l~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~vG~~~~~~~--~~~~~i~~~~v~~~~rg~G 79 (140)
T 1y9w_A 5 HIENGTRIEGEYIKNKVIQYNMSILTDEVKQP---MEEVSLVVKNEEGKIFGGVTGTMY--FYHLHIDFLWVDESVRHDG 79 (140)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHTSCGGGCCC---CEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEEEEECGGGTTTT
T ss_pred EeccCCHHHHHHHHHHHHHhhhccCchhhhhh---ccceEEEEECCCCeEEEEEEEEEe--cCEEEEEEEEEcHHHcCCC
Confidence 46889999999999999876554433221110 011245666678999999999854 3679999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEcc
Q 013702 359 QGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 359 iG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
+|++|++.+++++++.|+..+.+.+ ..+.+||+|+||+..+.... |.... +.++|.|.
T Consensus 80 ig~~ll~~~~~~~~~~g~~~i~~~~~n~~a~~~y~~~Gf~~~~~~~~-------~~~~~-~~~~m~k~ 139 (140)
T 1y9w_A 80 YGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVED-------HPKGH-SQHFFEKR 139 (140)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEESS-------CSTTC-CEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEcCCHhHHHHHHHCCCEEEEEEcC-------ccCCc-eeEEEEec
Confidence 9999999999999999999998887 47899999999999876521 22222 77777664
|
| >1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.6e-15 Score=131.22 Aligned_cols=124 Identities=16% Similarity=0.185 Sum_probs=94.1
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcC-CcCCHH---HHHhh-----cCcEEEEEECCEEEEEEEEeeec-----CCCe
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDE---ELLKA-----LDSFYVVEREGQIIACAALFPFF-----KEKC 342 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e---~l~~~-----~~~~~V~~~dg~iVG~~~l~~~~-----~~~~ 342 (438)
.+.||+++++|++.+.+++...+..... ...+.+ .+..+ ...+++++.++++||++.+.... ....
T Consensus 6 ~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~ 85 (159)
T 1wwz_A 6 IEKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIV 85 (159)
T ss_dssp EEECCCCCHHHHHHHHHHHHHHTTTCHHHHCSHHHHHHHHHHHHHHHHGGGEEEEEETTEEEEEEEEEEEEEETTTTEEE
T ss_pred hhhhhhCCHhHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHhCCCCcEEEEEECCEEEEEEEEeccccccccCCce
Confidence 4679999999999999998754322100 011111 11111 23578889999999999885321 1234
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
++|..++|+|+|||||||++|++.+++++++.| +.+.+.+ .++++||+|+||+..+..
T Consensus 86 ~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g-~~i~l~v~~~N~~A~~fY~k~GF~~~~~~ 147 (159)
T 1wwz_A 86 GAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYN-DTIELWVGEKNYGAMNLYEKFGFKKVGKS 147 (159)
T ss_dssp EEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTC-SEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcC-CEEEEEEeCCCHHHHHHHHHCCCEEcccc
Confidence 789999999999999999999999999999999 9998876 589999999999998764
|
| >2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=4.5e-15 Score=126.83 Aligned_cols=123 Identities=22% Similarity=0.197 Sum_probs=96.9
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHH----HHhhc----CcEEEEEE--CCEEEEEEEEeeecC----CCeE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE----LLKAL----DSFYVVER--EGQIIACAALFPFFK----EKCG 343 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~----l~~~~----~~~~V~~~--dg~iVG~~~l~~~~~----~~~~ 343 (438)
+.||+++++|++.+.+++...... +..+.+.+. +...+ ..++++.. ++++||++.+.+... ...+
T Consensus 1 ~~ir~~~~~D~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~~~ 79 (153)
T 2eui_A 1 MRIVQATLEHLDLLAPLFVKYREF-YGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVW 79 (153)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEE
T ss_pred CeeEeCCHhhHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHhcCCCCeEEEEEecCCCcEEEEEEEEecCCCCccCceE
Confidence 469999999999999998754322 222223322 22222 35788888 899999999875422 3678
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 80 ~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~ 141 (153)
T 2eui_A 80 ILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQEF 141 (153)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTCBCCCSB
T ss_pred EEEEEEEcHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCEEeccc
Confidence 9999999999999999999999999999999999998887 479999999999987643
|
| >1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=128.64 Aligned_cols=125 Identities=18% Similarity=0.166 Sum_probs=98.3
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHc---CcCCcCCHHHHHhhc-----CcEEEEE--ECCEEEEEEEEeee----cCCC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVES---GALVRRTDEELLKAL-----DSFYVVE--REGQIIACAALFPF----FKEK 341 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~---~~~~~~~~e~l~~~~-----~~~~V~~--~dg~iVG~~~l~~~----~~~~ 341 (438)
+.+.||+++++|++.+.+++...... .+..+++.+.+...+ ..+++++ .++++||++.+.+. ....
T Consensus 3 ~~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vG~~~~~~~~~~~~~~~ 82 (152)
T 1qsm_A 3 DNITVRFVTENDKEGWQRLWKSYQDFYEVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKD 82 (152)
T ss_dssp CCEEEEECCGGGHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSC
T ss_pred ccEEEEEcchhhHHHHHHHHHHHHHHHhccCcchhhHHHHHHHhcCCCceeEEEEEeCCCCeEEEEEEEEecCCcccccc
Confidence 45789999999999999998763222 112223334444443 1467788 78999999998753 2347
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
.++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+....
T Consensus 83 ~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 145 (152)
T 1qsm_A 83 KIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAPKI 145 (152)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHEEECSEE
T ss_pred ceEEEEEEechhcccCCHHHHHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHcCCCccce
Confidence 899999999999999999999999999999999999998877 47999999999996543
|
| >1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=7.6e-15 Score=128.17 Aligned_cols=125 Identities=21% Similarity=0.252 Sum_probs=99.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCC--------HHHHHhhc----CcEEEEEEC-CEEEEEEEEeeec----C
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRT--------DEELLKAL----DSFYVVERE-GQIIACAALFPFF----K 339 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~--------~e~l~~~~----~~~~V~~~d-g~iVG~~~l~~~~----~ 339 (438)
...||+++++|++.+.+++..........++. .+.+...+ ..+++++.+ +++||++.+.... .
T Consensus 9 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~ 88 (158)
T 1vkc_A 9 SEYTIVDGEEYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNERSELLGHVWICITLDTVDY 88 (158)
T ss_dssp -CEEEEECGGGHHHHHHHHHHHHGGGCCSCCCHHHHHHHHHHHHHHHHHSSEEEEEEEEETTCCEEEEEEEEEEECTTTC
T ss_pred cceeccCCHHHHHHHHHHHHhhhHHhhcCCCCchhhhhhHHHHHHHHhcCCCcEEEEEEcCCCcEEEEEEEEEeccccCC
Confidence 35799999999999999998765443333343 22232222 246788888 9999999998643 4
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHHCCCeEecee
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k~GF~~~g~~ 401 (438)
...++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ +.+.+||+|+||+..+..
T Consensus 89 ~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~a~~~y~k~GF~~~~~~ 153 (158)
T 1vkc_A 89 VKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEERGYKARALI 153 (158)
T ss_dssp SEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHHTTCCCCCCC
T ss_pred CCEEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCcEEEEEEeCCCcHHHHHHHCCCEeeEEE
Confidence 56889999999999999999999999999999999999999876 268999999999987643
|
| >3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=133.40 Aligned_cols=127 Identities=19% Similarity=0.321 Sum_probs=97.5
Q ss_pred CCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhh----c-----CcEEEEEECCEEEEEEEEeee----cCC
Q 013702 274 SDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA----L-----DSFYVVEREGQIIACAALFPF----FKE 340 (438)
Q Consensus 274 ~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~----~-----~~~~V~~~dg~iVG~~~l~~~----~~~ 340 (438)
..+.+.||+++++|++.+.+++........ .+++.+..... + ..+++++.++++||++.+... ...
T Consensus 20 ~gm~~~ir~~~~~D~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~ 98 (176)
T 3fyn_A 20 QGLSPQVRTAHIGDVPVLVRLMSEFYQEAG-FALPHDAAIRAFKALLGKPDLGRIWLIAEGTESVGYIVLTLGFSMEYGG 98 (176)
T ss_dssp GSSGGGEEECCGGGHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHCGGGEEEEEEEETTEEEEEEEEEEEEETTTTE
T ss_pred ecceEEEEECCHHHHHHHHHHHHHHHHhcC-CCcccHHHHHHHHHHHhCCCCcEEEEEEECCEEEEEEEEEeccccccCC
Confidence 456678999999999999999988655422 23333332222 1 357888999999999998752 223
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
..++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 99 ~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 163 (176)
T 3fyn_A 99 LRGFVDDFFVRPNARGKGLGAAALQTVKQGCCDLGVRALLVETGPEDHPARGVYSRAGFEESGRM 163 (176)
T ss_dssp EEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCCEECCCC--------HHHHTTCCCCCCC
T ss_pred ceEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCeeccce
Confidence 5789999999999999999999999999999999999998888 478999999999987543
|
| >3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.4e-15 Score=131.47 Aligned_cols=126 Identities=17% Similarity=0.198 Sum_probs=101.9
Q ss_pred ceeEEEECCccCHHHHHHHHHHHH------HcCcCCcCCHHHHHhhc---------CcEEEEEECCEEEEEEEEeeecCC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLV------ESGALVRRTDEELLKAL---------DSFYVVEREGQIIACAALFPFFKE 340 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~------~~~~~~~~~~e~l~~~~---------~~~~V~~~dg~iVG~~~l~~~~~~ 340 (438)
..+.||+++++|++.+.+++.... ......+.+.+.+..++ ..++++..++++||++.+.+....
T Consensus 12 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~ 91 (188)
T 3owc_A 12 PELQLVPFQLGHFPILQRWFATEKELVQWAGPALRHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRRN 91 (188)
T ss_dssp -CEEEEECCGGGHHHHHTTCCSHHHHHHHHCTTCCSSCCGGGGHHHHHHHHSSSCSEEEEEEEETTEEEEEEEEEEETTT
T ss_pred CeEEEEECcHHHHHHHHHHHhChHHHhhhcCccccCcccHHHHHHHHHHhccCCCCcEEEEEEECCcEEEEEEEEecCCC
Confidence 457899999999999999875431 12223334444433322 357888899999999999966577
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
..++|..++|+|+|||+|||++|++.+++++++ .|+..+.+.+ .++.+||+|+||+..+..
T Consensus 92 ~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~ 157 (188)
T 3owc_A 92 GVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREEGLR 157 (188)
T ss_dssp TEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHHSTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEEEEEcHHHhCCChhHHHHHHHHHHHHHhhCceEEEEEEecCCHHHHHHHHHcCCEEeeeE
Confidence 899999999999999999999999999999998 5999999988 589999999999998754
|
| >2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-15 Score=128.12 Aligned_cols=122 Identities=16% Similarity=0.127 Sum_probs=93.1
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 353 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~ 353 (438)
++.||+++++|++.+.+++....... .+.+.+.+...+ ..++++..++++||++.+.. .....++|..++|+|+
T Consensus 1 m~~ir~~~~~D~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~ 77 (138)
T 2atr_A 1 MITIKKQEIVKLEDVLHLYQAVGWTN--YTHQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPS 77 (138)
T ss_dssp CEEEEEESCCCHHHHHHHHHTTCCCC-------CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTT
T ss_pred CeEEEEcCccCHHHHHHHHHHcCCCc--hhhhHHHHHHhcCCCeEEEEEEECCeeEEEEEEEe-CCCCeEEEEEEEEchh
Confidence 36899999999999999987642221 223344444433 34688889999999999874 4457899999999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
|||+|+|++|++.+++++++.|+..+.+.. ..+.+||+|+||+..+..
T Consensus 78 ~rg~Gig~~ll~~~~~~~~~~~~~~l~~~~n~~a~~~y~k~Gf~~~~~~ 126 (138)
T 2atr_A 78 YQRQGIGSSLMKEALGNFKEAYQVQLATEETEKNVGFYRSMGFEILSTY 126 (138)
T ss_dssp SCSSSHHHHHHHHHHGGGTTCSEEECCCCCCHHHHHHHHHTTCCCGGGG
T ss_pred hcCCCHHHHHHHHHHHHHHhcCeEEEEeCCChHHHHHHHHcCCccccee
Confidence 999999999999999999988873332211 689999999999987754
|
| >3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=128.66 Aligned_cols=122 Identities=21% Similarity=0.342 Sum_probs=98.4
Q ss_pred eeEEEECCccCHH-HHHHHHHHHHHcCcCCcCCHHHHHhhc---------CcEEEEEE--CCEEEEEEEEeeec-----C
Q 013702 277 YEGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF-----K 339 (438)
Q Consensus 277 ~~~IR~at~~D~~-~I~~L~~~~~~~~~~~~~~~e~l~~~~---------~~~~V~~~--dg~iVG~~~l~~~~-----~ 339 (438)
.+.||+++++|++ .+.+++...... .+++.+.+...+ ..++++.+ ++++||++.+.+.. .
T Consensus 4 ~~~ir~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 80 (149)
T 3t90_A 4 TFKIRKLEISDKRKGFIELLGQLTVT---GSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMIEKKFLRNC 80 (149)
T ss_dssp CEEEEECCGGGGGTTHHHHHTTTSCC---CCCCHHHHHHHHHHHHTTGGGEEEEEEEETTTTEEEEEEEEEEEECSHHHH
T ss_pred eEEEEecCchhhHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcEEEEEEEEeccccCCCC
Confidence 3689999999999 999997754322 245666655522 23456667 79999999998632 3
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
...++|..++|+|+|||+|+|++|++.+++++++.|+..+.+.+ ..+.+||+|+||+..+..
T Consensus 81 ~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 143 (149)
T 3t90_A 81 GKAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVENKVFYEKCGMSNKSIQ 143 (149)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEECCCCGGGHHHHHTTTCCCCCCC
T ss_pred CCceEEEEEEECHHHhCCcHHHHHHHHHHHHHHHCCCeEEEEeccccHHHHHHHCCCeeccce
Confidence 56789999999999999999999999999999999999999887 455699999999988754
|
| >2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-14 Score=130.38 Aligned_cols=147 Identities=13% Similarity=0.103 Sum_probs=106.4
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCc---C-CcCCHHHHHhhc-------CcEEEE-EECCEEEEEEEEeeecC----
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGA---L-VRRTDEELLKAL-------DSFYVV-EREGQIIACAALFPFFK---- 339 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~---~-~~~~~e~l~~~~-------~~~~V~-~~dg~iVG~~~l~~~~~---- 339 (438)
+.+.||+++++|++.+.+++........ . .+.+.+.+..++ ..++++ ..++++||++.+.....
T Consensus 9 ~~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~iiG~~~~~~~~~~~~~ 88 (182)
T 2jlm_A 9 LFRFVECTEDQHALEILEILNDAIINSTALYDYKPRSKESMAAWFATKRQNNFPIIGAVNEVGQLLGFASWGSFRAFPAY 88 (182)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHHHCSSSCCSSCCCHHHHHHHHHHHHHTTCCEEEEEETTSCEEEEEEEEESSSSGGG
T ss_pred CcEEEEeCCHHHHHHHHHHHHHHHhcceeeccCCCCCHHHHHHHHHhccccCceEEEEEccCCcEEEEEEecccCCcccc
Confidence 3468999999999999999987654322 1 234555433322 245666 66899999999875422
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCC
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSR 415 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r 415 (438)
...+++ .++|+|+|||||||++|++.+++++++.|+.++.+.+ .+|++||+|+||+..+...-.. ..+..-
T Consensus 89 ~~~~e~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~GF~~~g~~~~~~----~~~g~~ 163 (182)
T 2jlm_A 89 KYTVEH-SVYIHKDYRGLGLSKHLMNELIKRAVESEVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAG----FKFGRW 163 (182)
T ss_dssp TTEEEE-EEEECTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEE
T ss_pred cceeEE-EEEEChhhcCCCHHHHHHHHHHHHHHHCCceEEEEEEeCCCHHHHHHHHHCCCcEEEEeeeee----eeCCEE
Confidence 234555 7999999999999999999999999999999999987 4899999999999988542110 011222
Q ss_pred CceEEEEccCCC
Q 013702 416 NSKYYMKKLLPD 427 (438)
Q Consensus 416 ~s~~~~k~ll~~ 427 (438)
.+.++|.+++++
T Consensus 164 ~d~~~m~~~~~~ 175 (182)
T 2jlm_A 164 LDAAFYQLTLDT 175 (182)
T ss_dssp EEEEEEEEECSC
T ss_pred EEeeeehhhhcc
Confidence 456777776653
|
| >1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-14 Score=124.90 Aligned_cols=142 Identities=18% Similarity=0.225 Sum_probs=106.7
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcc
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 353 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~ 353 (438)
+.+.||+++++|++.+..+.. ..+.+.+...+ ..+++++.++++||++.+.+ .....++|..++|+|+
T Consensus 3 M~~~ir~~~~~D~~~i~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~-~~~~~~~i~~~~v~p~ 72 (157)
T 1y9k_A 3 MSVVIERIPKEAIPKSLLLLA---------DPSERQIATYVQRGLTYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEH 72 (157)
T ss_dssp CCCEEEEECGGGCCHHHHHHH---------CCCHHHHHHHHHHSEEEEEECSSSEEEEEEEEE-CSTTEEEEEEEEECGG
T ss_pred ceEEEEECCHhHhhhhhcccc---------CCCHHHHHHHhccCcEEEEEECCEEEEEEEEEc-CCCCEEEEEEEEECHH
Confidence 457899999999999854421 22445555444 46788888999999999974 3567899999999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHh---hhhhcC--CCCceEEEEcc
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEER---RKRINL--SRNSKYYMKKL 424 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~---~~~y~~--~r~s~~~~k~l 424 (438)
|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+...-.... ...+.. ...+.++|++.
T Consensus 73 ~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~m~k~ 152 (157)
T 1y9k_A 73 LQGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSIDFDYFSKHYEEEIIENGIVCRDMIRLAME 152 (157)
T ss_dssp GCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEETTHHHHHCSSCEEETTEEECSEEEEEEE
T ss_pred HcCCCHHHHHHHHHHHHHHHCCCCEEEEEeCCCCHHHHHHHHHCCCEEeccccccccCCCchHHHHcCCchHHHhhHHHH
Confidence 999999999999999999999999998887 358999999999998864311100 000011 23467888887
Q ss_pred CCC
Q 013702 425 LPD 427 (438)
Q Consensus 425 l~~ 427 (438)
+++
T Consensus 153 l~~ 155 (157)
T 1y9k_A 153 LNK 155 (157)
T ss_dssp CC-
T ss_pred hcc
Confidence 764
|
| >1q2y_A Protein YJCF, similar to hypothetical proteins; GCN5-related N-acetyltransferase superfamily fold, NYSGXRC, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=9.2e-15 Score=125.34 Aligned_cols=119 Identities=20% Similarity=0.218 Sum_probs=96.1
Q ss_pred EEEE-CCccCHHHHHHHHHHHHHcCcCCcCC--HHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcccc
Q 013702 279 GTRT-AKVTDLSGIKQIIQPLVESGALVRRT--DEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 355 (438)
Q Consensus 279 ~IR~-at~~D~~~I~~L~~~~~~~~~~~~~~--~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yR 355 (438)
.||. .+++|++.+.+++...+......+.. .+.+ ..-..+++++.++++||++.+.+ ..+.++|..++|+|+||
T Consensus 2 ~i~~~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~--~~~~~~i~~~~v~~~~r 78 (140)
T 1q2y_A 2 KAVIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDEL-ENESEHIVVYDGEKPVGAGRWRM--KDGYGKLERICVLKSHR 78 (140)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHTTTSCCCTTTTCCTT-GGGSEEEEEEETTEEEEEEEEEE--ETTEEEEEEEECCGGGT
T ss_pred ceEEecChHHHHHHHHHHHHHhccccCCChHHHHhhc-cCCcEEEEEEECCeEEEEEEEEE--cCCcEEEEEEEEcHHHh
Confidence 4665 48899999999999876654221111 1111 11245788889999999999985 35789999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEece
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 400 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~ 400 (438)
|+|+|++|++.+++++++.|++.+.+.+ ..+.+||+++||+..+.
T Consensus 79 g~Gig~~ll~~~~~~~~~~g~~~i~l~~n~~~~~~y~~~Gf~~~~~ 124 (140)
T 1q2y_A 79 SAGVGGIIMKALEKAAADGGASGFILNAQTQAVPFYKKHGYRVLSE 124 (140)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHTTCEESCS
T ss_pred ccCHHHHHHHHHHHHHHHCCCcEEEEEecHHHHHHHHHCCCEEecc
Confidence 9999999999999999999999998888 68999999999999876
|
| >3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.5e-14 Score=130.79 Aligned_cols=147 Identities=10% Similarity=0.079 Sum_probs=111.1
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC----CcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeee---cCCCeEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL---DSFYVVEREGQIIACAALFPF---FKEKCGEV 345 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~---~~~~~~~I 345 (438)
..+.||+++++|++.+.+++...+..... .....+.+...+ ..++++..++++||++.+.+. ......++
T Consensus 33 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~~~ 112 (197)
T 3ld2_A 33 GSMKISPMLLSDIEQVVELENKTWSEQNTPVPLPVASKDQIIQKFESNTHFLVAKIKDKIVGVLDYSSLYPFPSGQHIVT 112 (197)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHHCCTTTCCSCSCCCCHHHHHHHHTTTCEEEEEEESSCEEEEEEEEESCSSGGGTTEEE
T ss_pred CcEEEEeCCHHHHHHHHHHHHHhccccCCCCccccccHHHHHHhhCCCCeEEEEEeCCCEEEEEEEEeccCCCCCCeEEE
Confidence 45789999999999999998876544322 235566665544 457888899999999999863 23456777
Q ss_pred EEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEE
Q 013702 346 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM 421 (438)
Q Consensus 346 ~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~ 421 (438)
..++|+|+|||+|||++|++.+++++++. ++.+++.+ .++.+||+|+||+..+...-.. ..+....+.++|
T Consensus 113 ~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~----~~~g~~~~~~~~ 187 (197)
T 3ld2_A 113 FGIAVAEKERRKGIGRALVQIFLNEVKSD-YQKVLIHVLSSNQEAVLFYKKLGFDLEARLTKQF----FLKGQYVDDLIY 187 (197)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHTTT-CSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEEEEEEE
T ss_pred EEEEEcHHHcCCCHHHHHHHHHHHHHHHH-HHeEEEEeeCCCHHHHHHHHHCCCEEeeeccceE----EECCeecceeee
Confidence 79999999999999999999999999988 99998877 5799999999999998642110 012222366777
Q ss_pred EccCCC
Q 013702 422 KKLLPD 427 (438)
Q Consensus 422 k~ll~~ 427 (438)
.+.+.+
T Consensus 188 ~~~l~~ 193 (197)
T 3ld2_A 188 SYDLEA 193 (197)
T ss_dssp EEECC-
T ss_pred eehhcc
Confidence 777654
|
| >3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-14 Score=126.18 Aligned_cols=125 Identities=13% Similarity=0.060 Sum_probs=99.5
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC--CcCCHHHHHhhc-------CcEEEEEE--CCEEEEEEEEeeecCCCeEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL--VRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFFKEKCGE 344 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~--~~~~~e~l~~~~-------~~~~V~~~--dg~iVG~~~l~~~~~~~~~~ 344 (438)
..+.||+++++|++.+.+++.......+. .+.+.++...++ ...+++.. ++++||++.+.+......++
T Consensus 6 ~~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~~~~~~~~~~~~ 85 (168)
T 3fbu_A 6 ERLLIRKFEFKDWEAVHEYTSDSDVMKYIPEGVFTEEDTRNFVNKNMGENAKNFPVILIGENILVGHIVFHKYFGEHTYE 85 (168)
T ss_dssp SSEEECCCCGGGHHHHHHHHTCTTTTTTSTTCSCCHHHHHHHHHHTTC--CCEEEEEETTTTEEEEEEEEEEEETTTEEE
T ss_pred CceEEEeCCHHHHHHHHHHhCCHHHHHhCCCCCCCHHHHHHHHHHHHhcccceEEEEECCCCCEEEEEEEEeecCCCcEE
Confidence 34689999999999999998653322222 244666655544 12566666 89999999998765567788
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+ .++|+|+|||+|||++|++.+++++.+. |++.+.+.+ .++++||+|+||+..+..
T Consensus 86 i-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 146 (168)
T 3fbu_A 86 I-GWVFNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGYF 146 (168)
T ss_dssp E-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred E-EEEECHHHhcCCHHHHHHHHHHHHHHhhCCceEEEEEeccCChHHHHHHHHCCCeEEEEe
Confidence 8 5669999999999999999999999776 999999988 579999999999998854
|
| >2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-15 Score=145.90 Aligned_cols=142 Identities=17% Similarity=0.089 Sum_probs=110.5
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ ++++++.+.+.+ +. ..++.+ +..+|+.|.|||++|. .|. .++|+|
T Consensus 93 ~l~~~G~~----~~~~~~~~~~~~-----------~~------~~~~~~-~~~ll~~g~ipVi~~~----~g~-~~~~~D 145 (247)
T 2a1f_A 93 SLFRADVN----AKLMSAFQLNGI-----------CD------TYNWSE-AIKMLREKRVVIFSAG----TGN-PFFTTD 145 (247)
T ss_dssp HHHHTTCC----EEEEESSCCTTT-----------SE------ECCHHH-HHHHHHTTCEEEEEST----TSC-SSCCHH
T ss_pred HHHHcCCC----eEEecccccccc-----------cc------hhhHHH-HHHHHhCCCEEEEeCC----cCC-CCCCcH
Confidence 56666765 888888775321 11 124555 4899999999999982 233 459999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCC
Q 013702 103 EVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 175 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (438)
++|+.+|.+|+||+|+|+|||+|+. +++++|++++.+|+.++ +.
T Consensus 146 ~~Aa~lA~~l~Ad~liilTDVdGvy~~dP~~~p~a~~i~~i~~~e~~~~---g~-------------------------- 196 (247)
T 2a1f_A 146 STACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSYAEVIDK---EL-------------------------- 196 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECHHHHHHT---TC--------------------------
T ss_pred HHHHHHHHhCCCCEEEEEeCCCcccCCCCCCCCCCeEcccCCHHHHHHc---Cc--------------------------
Confidence 9999999999999999999999873 24899999999887654 22
Q ss_pred CccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 013702 176 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 255 (438)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~ 255 (438)
+ + | |+.+|..|++.|++ ++|+|++.|
T Consensus 197 -----------------------------~-~---------------------m--~~~aa~~a~~~gv~-v~I~~~~~~ 222 (247)
T 2a1f_A 197 -----------------------------K-V---------------------M--DLSAFTLARDHGMP-IRVFNMGKP 222 (247)
T ss_dssp -----------------------------C-S---------------------S--CHHHHHHHHHHTCC-EEEEETTST
T ss_pred -----------------------------c-c---------------------c--CHHHHHHHHHcCCc-EEEEeCCCc
Confidence 1 2 5 67799999999998 999999999
Q ss_pred ceeeeehhhcCCCcccccCC
Q 013702 256 GVLLLELFKRDGMGTMVASD 275 (438)
Q Consensus 256 ~~ll~el~~~~g~GT~i~~d 275 (438)
+.+ .++++++..||.|...
T Consensus 223 ~~l-~~~l~g~~~GT~~~~~ 241 (247)
T 2a1f_A 223 GAL-RQVVTGTEEGTTICEG 241 (247)
T ss_dssp THH-HHHHTCSCSSEEECCC
T ss_pred hHH-HHHHcCCCCceEEeec
Confidence 875 6788888899999753
|
| >3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228} | Back alignment and structure |
|---|
Probab=99.59 E-value=7.8e-15 Score=128.57 Aligned_cols=145 Identities=13% Similarity=0.114 Sum_probs=105.9
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCc-----CCcCCHHHHHhhcC------cEEEEEECCEEEEEEEEeeecC---CC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGA-----LVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK---EK 341 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~-----~~~~~~e~l~~~~~------~~~V~~~dg~iVG~~~l~~~~~---~~ 341 (438)
.++.||+++++|++.+.+++........ ....+.+.+...+. .+++++.++++||++.+.+... ..
T Consensus 3 ~~~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 82 (169)
T 3g8w_A 3 AMNNIRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCH 82 (169)
T ss_dssp -CCCEEECCGGGHHHHHHHHHTCCCTTCHHHHHHHHCCHHHHHHHHSTTCTTEEEEEEESSSCEEEEEEEEECCSTTTTT
T ss_pred cceEEEecChHHHHHHHHHHHHhhhhcccCCccccccCHHHHHHHhCCCCcceEEEEEEECCEEEEEEEEEeccccccCc
Confidence 4578999999999999999765432211 11233344444431 4678888999999999986432 26
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCc
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNS 417 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s 417 (438)
.++|..++|+| ||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+...-.. ..+....+
T Consensus 83 ~~~i~~~~v~~--rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~----~~~g~~~d 156 (169)
T 3g8w_A 83 KAILENNFVKN--NDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFEKNAS----KIGNEYFD 156 (169)
T ss_dssp EEEEEEEEEGG--GCHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCEEEEEEEEEE----EETTEEEE
T ss_pred eEEEEEEEEcc--CCCcHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHcCCEEeeeecCcE----EECCEehh
Confidence 89999999999 99999999999999999999999999877 5799999999999988642111 11222335
Q ss_pred eEEEEccCC
Q 013702 418 KYYMKKLLP 426 (438)
Q Consensus 418 ~~~~k~ll~ 426 (438)
.++|.+.+.
T Consensus 157 ~~~m~~~l~ 165 (169)
T 3g8w_A 157 ENWLIYSTT 165 (169)
T ss_dssp EEEEEEECC
T ss_pred HHHHHhhcc
Confidence 566665554
|
| >2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.2e-14 Score=123.94 Aligned_cols=125 Identities=18% Similarity=0.217 Sum_probs=98.8
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCC--------cCC----HHHHHhhc---C---cEEEEE-ECCEEEEEEEEeeec
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALV--------RRT----DEELLKAL---D---SFYVVE-REGQIIACAALFPFF 338 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~--------~~~----~e~l~~~~---~---~~~V~~-~dg~iVG~~~l~~~~ 338 (438)
+.||+++.+|++.+.+++...+...+.. ... .+.+...+ . .++++. .++++||++.+.+..
T Consensus 1 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~ 80 (174)
T 2cy2_A 1 VRIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDR 80 (174)
T ss_dssp CCEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECC
T ss_pred CceeecCHhHHHHHHHHHHHHHHHhhcCcCCHHHHhhhhhhhhHHHHHHHHcCCCcCceEEEEEecCCEEEEEEEEecCC
Confidence 3689999999999999998765543321 111 11222222 2 467776 789999999998643
Q ss_pred C----CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 339 K----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 339 ~----~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
. ...++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+...
T Consensus 81 ~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~ 152 (174)
T 2cy2_A 81 ASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGERE 152 (174)
T ss_dssp SCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCCceEEEEEEECHHHhCcCHHHHHHHHHHHHHHhCCCceEEEEEECCChhHHHHHHHcCCeeeceEE
Confidence 1 47899999999999999999999999999999999999999887 4799999999999998654
|
| >2pc1_A Acetyltransferase, GNAT family; NP_688560.1, structural genom joint center for structural genomics, JCSG; HET: MSE; 1.28A {Streptococcus agalactiae 2603V} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-13 Score=125.72 Aligned_cols=138 Identities=13% Similarity=0.121 Sum_probs=105.7
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHc---CcC-------CcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecC---
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVES---GAL-------VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK--- 339 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~---~~~-------~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~--- 339 (438)
...+.||+++++|++.+.+++...... ... ...+.+.+..++ ...+++..++++||++.+.....
T Consensus 17 ~~~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~ 96 (201)
T 2pc1_A 17 FQGMQIRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGMLATYAAVIDGHEEVY 96 (201)
T ss_dssp ETTEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCTTCSTTCSSCHHHHHHHHHHTCEEEEEETTEEEEEEEEEEECCGGG
T ss_pred CCCcEEEEcCHHHHHHHHHHHHHHHHHHHHhCCCCCccccCCCCHHHHHHHHhcCceEEEEECCeEEEEEEEecCCchhh
Confidence 345789999999999999998764311 111 122344555444 45778889999999999986432
Q ss_pred ------------CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceecc
Q 013702 340 ------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 403 (438)
Q Consensus 340 ------------~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~l 403 (438)
.+.+++..++|+|+|||+|||++|++.+++ +.|++.+.+.+ ..+.+||+|+||+..+...+
T Consensus 97 ~~~~~g~w~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~---~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~ 173 (201)
T 2pc1_A 97 DAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIE---GHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPL 173 (201)
T ss_dssp GGCBSSCCSSCCSCEEEEEEEEECSTTCSSHHHHHHHHHHHH---HSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEECS
T ss_pred ccccccccccCCCcEEEEEEEEECHHHhCCCHHHHHHHHHHH---hCCCceEEEEEecCCHHHHHHHHHCCCEEEEEEEe
Confidence 156789999999999999999999999999 78999999888 46999999999999987643
Q ss_pred chHhhhhhcCCCCceEEEEccCC
Q 013702 404 PEERRKRINLSRNSKYYMKKLLP 426 (438)
Q Consensus 404 p~~~~~~y~~~r~s~~~~k~ll~ 426 (438)
+ ...++|.+.+.
T Consensus 174 ~-----------~~~~~~~k~l~ 185 (201)
T 2pc1_A 174 D-----------GVRLAYQKIKE 185 (201)
T ss_dssp S-----------SCEEEEEEECC
T ss_pred c-----------cchhhhHHHhc
Confidence 3 35566666554
|
| >1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=9.8e-15 Score=128.29 Aligned_cols=124 Identities=12% Similarity=0.169 Sum_probs=93.9
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc--CCcCCH--------HHHHhhc--------CcEEEEEEC-CEEEEEEEEeee
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA--LVRRTD--------EELLKAL--------DSFYVVERE-GQIIACAALFPF 337 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~--~~~~~~--------e~l~~~~--------~~~~V~~~d-g~iVG~~~l~~~ 337 (438)
++.||+++++|++.+.+++...+.... ...++. +.+..++ ..+++++.+ +++||++.+...
T Consensus 2 ~l~lR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~ 81 (158)
T 1on0_A 2 TIMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAE 81 (158)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEEC
T ss_pred ceeeeeCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEcCCCCceEEEEEEec
Confidence 467999999999999998754322100 111221 1222222 135666666 899999988753
Q ss_pred c--CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 338 F--KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 338 ~--~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
. ....+++..++|+|+|||||||++|++.+++++++.|++++.+.+ .+|++||+|+||+..+.
T Consensus 82 ~~~~~~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~ 150 (158)
T 1on0_A 82 PEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDV 150 (158)
T ss_dssp TTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCCEEEECCCTTCHHHHHHHHHTTCCCCCC
T ss_pred CCCCCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEEeE
Confidence 3 236788999999999999999999999999999999999999988 57999999999998764
|
| >2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=127.39 Aligned_cols=125 Identities=20% Similarity=0.176 Sum_probs=96.2
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHH----hhc--CcEEEEEECCEEEEEEEEeeec----CCCeEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL----KAL--DSFYVVEREGQIIACAALFPFF----KEKCGEVA 346 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~----~~~--~~~~V~~~dg~iVG~~~l~~~~----~~~~~~I~ 346 (438)
.+.||+++++|++.+.+++............+.+... ..+ ...+++..++++||++.+.... ....++|.
T Consensus 22 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~i~ 101 (172)
T 2r1i_A 22 VEVPRRATPADAATVAQMLHDFNTEFGAPTPGTDELASRLSHLLAGEDVVVLLAGEPPTGLAVLSFRPNVWYPGPVAILD 101 (172)
T ss_dssp CCCCEECCGGGHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHTTSSSEEEEEETTTTCEEEEEEEECCTTCSSCEEEEE
T ss_pred ceEEEECCHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHhcCCCeEEEEECCeeEEEEEEEeccCCCCCCceEEEE
Confidence 4679999999999999999865433211222333332 222 2333333399999999987533 34688999
Q ss_pred EEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 347 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 347 ~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 102 ~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~~~~~~ 160 (172)
T 2r1i_A 102 ELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGFTNTEPN 160 (172)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCBSSCTT
T ss_pred EEEECcccccCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCEecccC
Confidence 9999999999999999999999999999999999887 489999999999988754
|
| >4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=8.1e-15 Score=127.75 Aligned_cols=123 Identities=23% Similarity=0.262 Sum_probs=97.4
Q ss_pred ceeEEEECCccCHH-HHHHHHHHHHHcCcCCcCCHHHHHhhc---------CcEEEEEE--CCEEEEEEEEeeec-----
Q 013702 276 LYEGTRTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVER--EGQIIACAALFPFF----- 338 (438)
Q Consensus 276 ~~~~IR~at~~D~~-~I~~L~~~~~~~~~~~~~~~e~l~~~~---------~~~~V~~~--dg~iVG~~~l~~~~----- 338 (438)
..+.||+++.+|++ .+.+++....... ..+.+.+...+ ..++++++ ++++||++.+....
T Consensus 20 ~~~~iR~~~~~D~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~~~~~~~~ 96 (165)
T 4ag7_A 20 DNFKVRPLAKDDFSKGYVDLLSQLTSVG---NLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLVVEMKFIHG 96 (165)
T ss_dssp TTEEEEECBGGGGTTTHHHHHHHHSCCT---TCCHHHHHHHHHHHHTCSSCCEEEEEEETTTTEEEEEEEEEEEECSHHH
T ss_pred ccEEEeeCCHhHHHHHHHHHHHHhhcCC---CCCHHHHHHHHHHHhcCCCceEEEEEEeCCCCeEEEEEEEEecccccCC
Confidence 34689999999999 5999887654332 23444444322 34677777 99999999987421
Q ss_pred CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 339 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 339 ~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
....++|..++|+|+|||+|||++|++.+++++++.|+..+.+.+ ..+.+||+|+||+..+..
T Consensus 97 ~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~Y~k~GF~~~~~~ 160 (165)
T 4ag7_A 97 AGSRGRVEDVVVDTEMRRQKLGAVLLKTLVSLGKSLGVYKISLECVPELLPFYSQFGFQDDCNF 160 (165)
T ss_dssp HCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEEECSCGGGHHHHHTTTCEECCCC
T ss_pred CCcEEEEEEEEECHHhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeCHHHHHHHHHCCCCcccch
Confidence 235789999999999999999999999999999999999999988 566899999999987643
|
| >1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=3.2e-15 Score=131.26 Aligned_cols=140 Identities=21% Similarity=0.277 Sum_probs=108.8
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC-------CcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 350 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~-------~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V 350 (438)
+.||+++.+| +.+.+++......... .....+.+...-..+++++.++++||++.+.+. ....++|..++|
T Consensus 1 ~~iR~~~~~D-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~-~~~~~~i~~~~V 78 (159)
T 1yx0_A 1 MHIKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKEL-DTRHGEIKSMRT 78 (159)
T ss_dssp CCEEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEEE-ETTEEECCCCCC
T ss_pred CeeEEcCcCC-HHHHHHHHHHHHHhhccCCcchhhhhhHHHhcCCCceEEEEEECCEEEEEEEEEEc-CCCcEEEEEEEE
Confidence 3699999999 9999998765432211 112223333333567888889999999999854 356889999999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEcc
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+.. ..|.....+.+++|.+
T Consensus 79 ~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~Gf~~~~~~-------~~~~~~~~~~~~~~~~ 151 (159)
T 1yx0_A 79 SASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEPF-------ADYGEDPNSVFMTKKL 151 (159)
T ss_dssp STTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECCCC-------TTSCCCTTCCCEEECC
T ss_pred CHhhcCCCHHHHHHHHHHHHHHhCCCcEEEEEecccccCchHHHHHHHcCCEEcccc-------ccccCCCcchhhhHHH
Confidence 999999999999999999999999999998876 268999999999998754 2456677888888887
Q ss_pred CC
Q 013702 425 LP 426 (438)
Q Consensus 425 l~ 426 (438)
.+
T Consensus 152 ~~ 153 (159)
T 1yx0_A 152 LE 153 (159)
T ss_dssp --
T ss_pred Hh
Confidence 76
|
| >3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.3e-14 Score=122.55 Aligned_cols=124 Identities=11% Similarity=0.147 Sum_probs=100.1
Q ss_pred ceeEEEECCccCHHHHHHHHHHH--HHcCc-CCcCCHHHHHhhc--------CcEEEEEECCEEEEEEEEeee-cCCCeE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPL--VESGA-LVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPF-FKEKCG 343 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~--~~~~~-~~~~~~e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~-~~~~~~ 343 (438)
+.+.||+++++|.+.+.+++... ....+ ....+.+.+..++ ..++++..++++||++.+.+. .....+
T Consensus 10 ~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 89 (160)
T 3exn_A 10 LTLDLAPVTPKDAPLLHRVFHLSPSYFALIGMELPTLEDVVRDLQTLEVDPRRRAFLLFLGQEPVGYLDAKLGYPEAEDA 89 (160)
T ss_dssp CCCEEEECCGGGHHHHHHHHHTCHHHHHHTTCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEETCSSTTCE
T ss_pred CceEEEECChhhHHHHHHHHHhChHHHhccccCCCChHHHHHHHHHhhhCCCceEEEEEECCeEEEEEEeecccCCCCce
Confidence 45789999999999999998763 22111 2234555555443 247888899999999999864 345789
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+|..++|+|+|||+|+|++|++.+++++++ +..+.+.+ ..+.+||+|+||+..+..
T Consensus 90 ~i~~l~v~p~~rg~Gig~~ll~~~~~~~~~--~~~i~~~~~~~n~~a~~~y~~~Gf~~~~~~ 149 (160)
T 3exn_A 90 TLSLLLIREDHQGRGLGRQALERFAAGLDG--VRRLYAVVYGHNPKAKAFFQAQGFRYVKDG 149 (160)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHTCTT--CCEEEEEEESSCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHhh--CCeEEEEEeeCCHHHHHHHHHCCCEEcccC
Confidence 999999999999999999999999999988 88888877 479999999999998765
|
| >1xeb_A Hypothetical protein PA0115; midwest center for structural genomics, MCSG, structural GEN protein structure initiative, PSI, APC22065; 2.35A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=3.4e-15 Score=129.27 Aligned_cols=124 Identities=16% Similarity=0.182 Sum_probs=96.1
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCC-HHHHHh-hcCcEEEEEECCEEEEEEEEeeecCC-CeEEEEEEEECccc
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRT-DEELLK-ALDSFYVVEREGQIIACAALFPFFKE-KCGEVAAIGVSPEC 354 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~-~e~l~~-~~~~~~V~~~dg~iVG~~~l~~~~~~-~~~~I~~v~V~p~y 354 (438)
..||+++++|++.+.++....+......+.. .+.... ....++++..++++||++.+.+.... ..++|..++|+|+|
T Consensus 8 ~~ir~~~~~d~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~i~~~~v~p~~ 87 (150)
T 1xeb_A 8 KHHADLTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAA 87 (150)
T ss_dssp EEGGGCCHHHHHHHHHHHHHHHTTTTTCCCCSCCSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGGG
T ss_pred eeehhCCHHHHHHHHHHHHHHhhcccCCChhhhhhhhccCCcEEEEEEECCEEEEEEEEEccCCCCCeEEEEEEEECHHH
Confidence 3578889999999999988766543322111 011111 12356777889999999999854322 57999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 355 RGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 355 RgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
||+|+|++|++.+++++++. |+..+.+.+ ..+.+||+|+||+..+..
T Consensus 88 rg~Gig~~ll~~~~~~~~~~~g~~~i~l~~n~~a~~~y~~~Gf~~~~~~ 136 (150)
T 1xeb_A 88 RGQGLGHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEV 136 (150)
T ss_dssp TTSSHHHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSCC
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCEEEEechhHHHHHHHHcCCEECCcc
Confidence 99999999999999999987 999998887 578999999999998744
|
| >1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=127.73 Aligned_cols=121 Identities=21% Similarity=0.302 Sum_probs=91.1
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHh----hc---------------CcEEEEE--ECCEEEEEEEEee
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK----AL---------------DSFYVVE--REGQIIACAALFP 336 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~----~~---------------~~~~V~~--~dg~iVG~~~l~~ 336 (438)
+.||+++++|++.+.+++..... ....+.+.+.. +. ...+++. .++++||++.+..
T Consensus 8 ~~IR~a~~~D~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~~ 84 (160)
T 1i12_A 8 FYIRRMEEGDLEQVTETLKVLTT---VGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNIII 84 (160)
T ss_dssp EEEEECCGGGHHHHHHHHTTTSC---CCCCCHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEEEEEE
T ss_pred cEEecCCHHHHHHHHHHHHhccc---CCCCCHHHHHHHHHHHHhccccccccccccccceEEEEEEccCCeEEEEEEEEe
Confidence 57999999999999998643211 11233333221 10 1135554 5799999998764
Q ss_pred ecC-----CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 337 FFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 337 ~~~-----~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
..+ ...++|..++|+|+|||||||++|++.+++++++.|+..+.+.+ ..+.+||+|+||+..+..
T Consensus 85 ~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~fY~k~GF~~~g~~ 155 (160)
T 1i12_A 85 ERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVE 155 (160)
T ss_dssp EECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEE
T ss_pred cccccccCCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEcChhhHHHHHHCCCEEcCee
Confidence 321 24578999999999999999999999999999999999999988 456799999999998754
|
| >1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-14 Score=129.31 Aligned_cols=125 Identities=12% Similarity=0.191 Sum_probs=98.7
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC--CcCC--------HHHHHhhc--------CcEEEEEEC-CEEEEEEEEee
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL--VRRT--------DEELLKAL--------DSFYVVERE-GQIIACAALFP 336 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~--~~~~--------~e~l~~~~--------~~~~V~~~d-g~iVG~~~l~~ 336 (438)
+.+.||+++++|++.+.+++...+...+. ..++ .+.+..++ ..+++++.+ +++||++.+..
T Consensus 25 m~i~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~ 104 (180)
T 1ufh_A 25 MTIMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHA 104 (180)
T ss_dssp -CCEEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHhhhhhccCCCcchhhhhhhHHHHHHHHHhhcCCCCeeEEEEEcCCCCEEEEEEEEe
Confidence 45789999999999999998765432110 1122 12233332 246778877 99999999986
Q ss_pred ecC--CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 337 FFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 337 ~~~--~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
... ...+++..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 105 ~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 174 (180)
T 1ufh_A 105 EPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDV 174 (180)
T ss_dssp CTTCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCCCCC
T ss_pred cCCCCCCcEEEEEEEECHhhcCCChHHHHHHHHHHHHHHCCCCEEEEEeccCcHHHHHHHHHCCCEEeee
Confidence 542 47899999999999999999999999999999999999999988 47999999999998775
|
| >2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=3.8e-14 Score=124.20 Aligned_cols=124 Identities=23% Similarity=0.270 Sum_probs=99.4
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc---CCcCCHHHHHhh-c-----CcEEEEEECCE--------EEEEEEEeeec-
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKA-L-----DSFYVVEREGQ--------IIACAALFPFF- 338 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~---~~~~~~e~l~~~-~-----~~~~V~~~dg~--------iVG~~~l~~~~- 338 (438)
.+.||+++++|++.+.+++........ ..+++.+.+... + ..+++++.+++ +||++.+....
T Consensus 3 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ivG~~~~~~~~~ 82 (171)
T 2b5g_A 3 KFVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYD 82 (171)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEE
T ss_pred ceEEEECCHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHhccCCCcEEEEEEECCCcccccCCceEEEEEEEeecC
Confidence 368999999999999999987643222 234455555443 2 35778887777 89999987532
Q ss_pred --CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 339 --KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 339 --~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
....+++..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 83 ~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~Gf~~~~~ 150 (171)
T 2b5g_A 83 PWIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSS 150 (171)
T ss_dssp TTTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTTTCEEHHH
T ss_pred CcCCceEEEEEEEECHhhhCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccCHHHHHHHHHcCCEeccc
Confidence 224588999999999999999999999999999999999999888 58999999999998764
|
| >2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=4.5e-15 Score=130.28 Aligned_cols=125 Identities=17% Similarity=0.136 Sum_probs=83.9
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCc---CCc-CCHHHHHhhc--------CcEEEEEECCEEEEEEEEeeecCCCeE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGA---LVR-RTDEELLKAL--------DSFYVVEREGQIIACAALFPFFKEKCG 343 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~---~~~-~~~e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~~~~~~~ 343 (438)
....||+++++|++.+.+++........ ... .+.+....++ ..++++..++++||++.+........+
T Consensus 12 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~ 91 (159)
T 2aj6_A 12 HMRTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMV 91 (159)
T ss_dssp CEEECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEE
T ss_pred hhhhcCCCchhhHHHHHHHHHHHHhccccccccCCCCHHHHHHHHHHHHhCCCcEEEEEEECCeEEEEEEEEeecCCCEE
Confidence 4457999999999999999987654332 111 1222222211 346788889999999998855566789
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
+|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 92 ~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 152 (159)
T 2aj6_A 92 NIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISNTIHKNNLPMISLNKDLGYQVSHV 152 (159)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCCCCC----------------------
T ss_pred EEEEEEECHHHccCCHHHHHHHHHHHHHHHcCCcEEEEEeccCCHHHHHHHHHCCCEEeee
Confidence 9999999999999999999999999999999999888776 36899999999998763
|
| >2ree_A CURA; GNAT, S-acetyltransferase, decarboxylase, polyketid synthase, loading, phosphopantetheine, transferase, lyase; HET: SO4; 1.95A {Lyngbya majuscula} PDB: 2ref_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5.9e-14 Score=130.09 Aligned_cols=124 Identities=19% Similarity=0.321 Sum_probs=99.2
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeec-------------
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF------------- 338 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~------------- 338 (438)
+.+.||+++++|++.|.+++...+... ..++.+.+...+ ..+++++.++++|||+.+.+..
T Consensus 11 ~~~~iR~a~~~D~~~i~~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~va~~~g~ivG~~~~~~~~~~~~~~~~~~~~~ 88 (224)
T 2ree_A 11 NYYNLRHPKIEDLRDLIALETLCWSEN--LQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRIDNPQLLDNKTCTQV 88 (224)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHHSCTT--TCCCHHHHHHHHHHCGGGCEEEEESSCEEEEEEEEEESCGGGGTTCCTTTG
T ss_pred CceEEEECCHHHHHHHHHHHHHhccCc--cccCHHHHHHHHHhCCCceEEEEECCEEEEEEEEeccCchhhchhhcccch
Confidence 446899999999999999987765432 235666665543 3467888999999999886431
Q ss_pred ------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEE--EE-------------------------cH
Q 013702 339 ------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLF--LL-------------------------TT 384 (438)
Q Consensus 339 ------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~--l~-------------------------t~ 384 (438)
....++|..++|+|+|||+|||++||+.++++|++. |++.+. +. ..
T Consensus 89 ~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~~~l~~~~~~~~~~~~~~~y~~~~~~~g~~N~ 168 (224)
T 2ree_A 89 PLLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAVTLCRNYPDYSPMPMAEYIHQKNESGLLVD 168 (224)
T ss_dssp GGGCCTTCSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHTTSTTCCEEEEEECCSSGGGTTTSCHHHHTTCBCTTSCBSS
T ss_pred hhccCCCCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCccEEEEeccCCccccCCCCCHHHHHHHHhcCCcccC
Confidence 235678999999999999999999999999999996 999997 31 13
Q ss_pred HHHHHHHHCCCeEecee
Q 013702 385 RTADWFKSRGFRECSIE 401 (438)
Q Consensus 385 ~a~~fY~k~GF~~~g~~ 401 (438)
++++||+|+||+..+..
T Consensus 169 ~a~~fY~k~GF~~~g~~ 185 (224)
T 2ree_A 169 PLLRFHQIHGAKIEKLL 185 (224)
T ss_dssp HHHHHHHHTTCEEEEEE
T ss_pred cceeeeecCCeEEEEEc
Confidence 58999999999998864
|
| >3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.57 E-value=9.2e-15 Score=126.95 Aligned_cols=119 Identities=25% Similarity=0.289 Sum_probs=91.4
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcC-----c-CCcCCHHHHHhh---c-CcEEEEEECCEEEEEEEEeeecCCCeEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESG-----A-LVRRTDEELLKA---L-DSFYVVEREGQIIACAALFPFFKEKCGEVA 346 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~-----~-~~~~~~e~l~~~---~-~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~ 346 (438)
.+.||+++++|++.+.+++....... + ..+++.+.+... . ..+++++.++++||++.+.+ .+++
T Consensus 4 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~-----~~~~- 77 (160)
T 3f8k_A 4 QIKIRKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKKIASNEDHVTFLAEVDGKVVGEASLHK-----DGEF- 77 (160)
T ss_dssp -CEEEECCGGGHHHHHHHHHHSCHHHHHHHTHHHHHTC-----------CEEEEEEEETTEEEEEEEEET-----TSBE-
T ss_pred cEEEEECCcchHHHHHHHHHhccccccceeeccccccCHHHHHHHhccCCceEEEEEECCeEEEEEEeec-----ceEE-
Confidence 46899999999999999988743221 0 112233333331 1 24688889999999999982 4556
Q ss_pred EEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 347 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 347 ~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 78 ~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~ 136 (160)
T 3f8k_A 78 SLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGFKMRFYE 136 (160)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHHTCEEEECS
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHHcCCEEEeec
Confidence 8999999999999999999999999999999999988 479999999999998654
|
| >3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-14 Score=126.81 Aligned_cols=122 Identities=18% Similarity=0.235 Sum_probs=80.7
Q ss_pred EEECCccCHHHHHHHHHHHHHcC------cCCcC-------CHHHHHh-hcCcEEEEEECCEEEEEEEEeeec-------
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESG------ALVRR-------TDEELLK-ALDSFYVVEREGQIIACAALFPFF------- 338 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~------~~~~~-------~~e~l~~-~~~~~~V~~~dg~iVG~~~l~~~~------- 338 (438)
||+++++|++.+.+++....... ..... ....... .-..++++++++++||++.+....
T Consensus 5 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 84 (166)
T 3jvn_A 5 IRRAKEIDLYCLNSLMYKLHDEHHQQCPDLFKTASEIEEEKSIARYLDDPECMVYVAEMDDVIIGFITGHFCELISTVSK 84 (166)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHHHSCC----------CCCHHHHHHCTTEEEEEEESSSSEEEEEEEEEEEECCSSSC
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHhhcCchhhcchhhHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEEEeecccccccc
Confidence 99999999999999998764321 11011 1111111 113478888899999999986421
Q ss_pred CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 339 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 339 ~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
....++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 85 ~~~~~~i~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~ 151 (166)
T 3jvn_A 85 LVMMATIDELYIEKEYRREGVAEQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLNEHIHY 151 (166)
T ss_dssp CEEEEEEEEEEECTTTCSSSHHHHHHHHHHHHHHTTTCSEEEECCC--CCBC---------------
T ss_pred CccEEEEEEEEECHHHhccCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCeEHHHH
Confidence 125678999999999999999999999999999999999999988 378999999999998743
|
| >2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=7.5e-14 Score=125.67 Aligned_cols=127 Identities=14% Similarity=0.093 Sum_probs=100.8
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC----CcCCHHHHH-hhc--------CcEEEEEECCEEEEEEEEeee-----
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELL-KAL--------DSFYVVEREGQIIACAALFPF----- 337 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~-~~~--------~~~~V~~~dg~iVG~~~l~~~----- 337 (438)
..+.||+++++|++.+.+++.......+. ...+.++.. .++ ..+++++.++++||++.+...
T Consensus 24 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~ 103 (202)
T 2bue_A 24 DSVTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGD 103 (202)
T ss_dssp CCEEEEECCGGGHHHHHHHHTSHHHHTTSCGGGCSCCHHHHHHHHCHHHHHTTTEEEEEEEETTEEEEEEEEEEGGGCCT
T ss_pred CcEEEEECCHHHHHHHHHHHcCchhhhhcCCCcccccHHHHHHHHHHhhcCCCCceeEEEEECCEEEEEEEEEEeccccc
Confidence 45789999999999999998765443332 122333322 121 257888899999999998742
Q ss_pred ------cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 338 ------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 338 ------~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
.....++|..++|+|+|||+|||++|++.+++++++ .|++.+.+.+ ..+.+||+|+||+..+...
T Consensus 104 ~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~~~~~ 179 (202)
T 2bue_A 104 GWWEEETDPGVRGIDQLLANASQLGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGTVT 179 (202)
T ss_dssp TSSTTCCCTTEEEEEEEESCGGGTTSSHHHHHHHHHHHHHHTSTTCCEEEECCCTTCHHHHHHHHHTTCEEEEEEE
T ss_pred ccccccCCCCceEEEEEEEChhhccCChHHHHHHHHHHHHHhCCCCcEEEeCcccCCHHHHHHHHHcCCEEeeeec
Confidence 234688999999999999999999999999999988 5999999987 4799999999999998764
|
| >1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=126.16 Aligned_cols=124 Identities=14% Similarity=0.149 Sum_probs=91.3
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc------CCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeec----CCCe
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA------LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF----KEKC 342 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~------~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~----~~~~ 342 (438)
++.||+++++|++.+.+++........ ......+.+...+ ..++++++++++||++.+.... ....
T Consensus 26 ~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 105 (168)
T 1bo4_A 26 IIRTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSE 105 (168)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEE
T ss_pred hheeeeCCHhHHHHHHHHHHHHHHhhcCccccccccchHHHHHHHhcCCCeEEEEEEECCeEEEEEEEEeccCccCCCce
Confidence 356999999999999999874322110 0112333333332 2467888999999999987543 2368
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
++|..++|+|+|||+|+|++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 106 ~~i~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~g~ 167 (168)
T 1bo4_A 106 IYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIREEVM 167 (168)
T ss_dssp EEEEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC-------
T ss_pred EEEEEEEECHHHhcCCHHHHHHHHHHHHHHhCCCCEEEEEecCCChHHHHHHHHcCCeeccc
Confidence 89999999999999999999999999999999999999988 37899999999998753
|
| >3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-13 Score=122.45 Aligned_cols=124 Identities=17% Similarity=0.133 Sum_probs=95.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHH--HcCcC-----CcCCHHHHHhhc-----------CcEEEEEE--CCEEEEEEEEee
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLV--ESGAL-----VRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFP 336 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~--~~~~~-----~~~~~e~l~~~~-----------~~~~V~~~--dg~iVG~~~l~~ 336 (438)
.+.||+++++|++.+.+++.... ...+. ...+.+++...+ ...+++.. ++++||++.+.+
T Consensus 9 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~ 88 (184)
T 3igr_A 9 HYQVRLIKSSDAVTIANYFMRNRHHLAPWEPKRSHAFFTPEGWKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSN 88 (184)
T ss_dssp TEEEEECCGGGHHHHHHHHHHTHHHHTTTSCCCCGGGGSHHHHHHHHHHHHHHHHTTSCEEEEEEETTTTEEEEEEEEEE
T ss_pred cEEEEecCHHHHHHHHHHHhccHhhcCcCCCCchhhccCHHHHHHHHHHHHhhcccCceEEEEEEECCCCeEEEEEEeee
Confidence 46899999999999999997632 22221 112444444433 22455544 789999999986
Q ss_pred ecC--CCeEEEEEEEECccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 337 FFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 337 ~~~--~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
... ...++++ ++|+|+|||+|||++|++.+++++ ++.|++.+.+.+ .++.+||+|+||+..+..
T Consensus 89 ~~~~~~~~~~i~-~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 159 (184)
T 3igr_A 89 ITRFPFHAGHVG-YSLDSEYQGKGIMRRAVNVTIDWMFKAQNLHRIMAAYIPRNEKSAKVLAALGFVKEGEA 159 (184)
T ss_dssp EECTTTCEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred cccccCceEEEE-EEEChhhccCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHcCCEeeeee
Confidence 543 3577774 899999999999999999999999 778999999988 579999999999998864
|
| >2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A | Back alignment and structure |
|---|
Probab=99.55 E-value=3.1e-14 Score=127.42 Aligned_cols=123 Identities=26% Similarity=0.293 Sum_probs=98.1
Q ss_pred ceeEEEECCccCHHH-HHHHHHHHHHcCcCCcCCHHHHHhhc--------CcEEEEEE--CCEEEEEEEEeeec-----C
Q 013702 276 LYEGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPFF-----K 339 (438)
Q Consensus 276 ~~~~IR~at~~D~~~-I~~L~~~~~~~~~~~~~~~e~l~~~~--------~~~~V~~~--dg~iVG~~~l~~~~-----~ 339 (438)
+.+.||+++.+|++. +.+++...... .+++.+.+..++ ..+++++. ++++||++.+.... .
T Consensus 37 ~~~~iR~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~ivG~~~~~~~~~~~~~~ 113 (184)
T 2o28_A 37 EGLVLRPLCTADLNRGFFKVLGQLTET---GVVSPEQFMKSFEHMKKSGDYYVTVVEDVTLGQIVATATLIIEHKFIHSC 113 (184)
T ss_dssp TTEEEEECBGGGGGTTHHHHHTTTSCC---CCCCHHHHHHHHHHHHHHSCEEEEEEEETTTTEEEEEEEEEEEECSHHHH
T ss_pred CceEEEECCHHHHHHHHHHHHHHHhhc---CCCCHHHHHHHHHHhhcCCCeEEEEEEeCCCCcEEEEEEEEeccccCCCC
Confidence 347899999999998 99997764332 234555554433 23456677 79999999987532 2
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
...++|..++|+|+|||+|||++|++++++++++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 114 ~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 176 (184)
T 2o28_A 114 AKRGRVEDVVVSDECRGKQLGKLLLSTLTLLSKKLNCYKITLECLPQNVGFYKKFGYTVSEEN 176 (184)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTEEEEEEEECGGGHHHHHTTTCEECSSE
T ss_pred CCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHCCCeeeccc
Confidence 46789999999999999999999999999999999999999888 445899999999987654
|
| >3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.7e-14 Score=132.77 Aligned_cols=120 Identities=20% Similarity=0.248 Sum_probs=99.0
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcccc
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 355 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yR 355 (438)
..+.||+++.+|++.+.++....+.. ++..+.+ ....++++++++++||++.+......+.++|..++|+|+||
T Consensus 97 ~~~~iR~~~~~D~~~i~~l~~~~~~~----~~~~~~~--~~~~~~v~~~~g~lVG~~~~~~~~~~~~~~i~~l~V~p~~R 170 (228)
T 3ec4_A 97 DDPGIVALGETDVPEMTALALATEPG----PWASGTW--RYGQFYGVRIDGRLAAMAGERMRPAPNLAEVSGVCTWPEYR 170 (228)
T ss_dssp CCTTCEECCGGGHHHHHHHHHHSCCS----CCCTTGG--GSSCEEEEEETTEEEEEEEECCCSSTTEEEEEEEEECGGGT
T ss_pred CCCEEEECChhCHHHHHHHHHhhCCC----CcChhhc--cCccEEEEEECCEEEEEEEEEEecCCCcEEEEEEEECHHHc
Confidence 34579999999999999996654332 3333332 23578899999999999998754357889999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
|||||++|++.+++++++.| ..+++.+ ..+++||+|+||+..+...
T Consensus 171 g~GiG~~Ll~~~~~~a~~~g-~~i~l~v~~~N~~a~~~Y~k~GF~~~~~~~ 220 (228)
T 3ec4_A 171 GRGLAARLIRKVIAGMAARG-EVPYLHSYASNASAIRLYESLGFRARRAMT 220 (228)
T ss_dssp TSSHHHHHHHHHHHHHHHTT-CEEEEEEETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHcC-CeEEEEEeCCCHHHHHHHHHCCCEEEEEEE
Confidence 99999999999999999999 8888877 4699999999999987653
|
| >2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase, hypothetical protein; 2.25A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.55 E-value=5.1e-14 Score=125.73 Aligned_cols=146 Identities=17% Similarity=0.179 Sum_probs=104.4
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC---CcCCHHHHHhhc-------C-cEEEEEECCEEEEEEEEeeec---CCC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL-------D-SFYVVEREGQIIACAALFPFF---KEK 341 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~---~~~~~e~l~~~~-------~-~~~V~~~dg~iVG~~~l~~~~---~~~ 341 (438)
..+.||+++++|++.+.+++......... ...+.+.+...+ . .++++..++++||++.+.... ...
T Consensus 6 ~~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 85 (177)
T 2vi7_A 6 PTIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSH 85 (177)
T ss_dssp -CEEEEECCGGGHHHHHHHHTSHHHHTTSSCCSSCCHHHHHHHHTTC-CCTTEEEEEEEETTEEEEEEEEEECSSGGGTT
T ss_pred CcEEEEECCHHHHHHHHHHHhChhhhcccccCCCCCHHHHHHHHhhhcccCCcEEEEEEECCEEEEEEEEecCCccccce
Confidence 34689999999999999998765433221 112344443322 2 467788899999999998543 134
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCC
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRN 416 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~ 416 (438)
.+++ .++|+|+|||||||++|++.+++++++. +++++.+.+ .+|++||+|+||+..+...-.. ..+....
T Consensus 86 ~~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~~~~~i~l~v~~~N~~a~~~Yek~GF~~~g~~~~~~----~~~g~~~ 160 (177)
T 2vi7_A 86 SGSI-GMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYA----VRDGRFV 160 (177)
T ss_dssp EEEC-TTCCEESSTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEE----EETTEEE
T ss_pred EEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhcCCeEEEEEEEECCCHHHHHHHHHCCCEEEeeecccE----EECCEEE
Confidence 5666 7999999999999999999999999886 699999887 4799999999999988542100 0112223
Q ss_pred ceEEEEccCC
Q 013702 417 SKYYMKKLLP 426 (438)
Q Consensus 417 s~~~~k~ll~ 426 (438)
+.++|.++.+
T Consensus 161 d~~~~~~~~~ 170 (177)
T 2vi7_A 161 DVYSMARLRR 170 (177)
T ss_dssp EEEEEEEECC
T ss_pred EEEEeeeeec
Confidence 5667766653
|
| >3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella pneumophila subsp. pneumophila, structural genomics, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.7e-14 Score=125.52 Aligned_cols=128 Identities=10% Similarity=0.039 Sum_probs=100.5
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCC----cCCHHHHHhhc------CcEEEEEECCEEEEEEEEeeecC-----
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALV----RRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK----- 339 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~----~~~~e~l~~~~------~~~~V~~~dg~iVG~~~l~~~~~----- 339 (438)
+..+.||+++++|++.+.+++.......+.. +.+.+.+...+ ..+++++.++++||++.+.+...
T Consensus 12 ~~~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~ 91 (182)
T 3f5b_A 12 EFRFCFKQMNKSQHELVLGWIHQPHINEWLHGDGLSNTIKDLHEFLNDGKPWATHWIAYDNEIPFAYLITSEIEKSEEYP 91 (182)
T ss_dssp CCCEEEEECCGGGHHHHHHHTTSHHHHTTSCHHHHHHHHHHHHHHHTTSCCSSEEEEEEETTEEEEEEEEEEECSCSSCT
T ss_pred cceEEEEECCHHHHHHHHHHHcCchhhhhccCCCccccHHHHHHHHhcCCCCeEEEEEEeCCCcEEEEEEeccccccccC
Confidence 3457899999999999988765543333221 11334444433 35788899999999999976532
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceecc
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 403 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~l 403 (438)
...+++..++|+|+|||+|||++|++.+++++. .|++.+.+.+ ..+.+||+|+||+..+....
T Consensus 92 ~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~-~~~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~ 158 (182)
T 3f5b_A 92 DGAVTLDLFICRLDYIGKGLSVQMIHEFILSQF-SDTKIVLINPEISNERAVHVYKKAGFEIIGEFIA 158 (182)
T ss_dssp TCEEEEEEEECSGGGCCHHHHHHHHHHHHHHHC-TTCSEEEECCBTTCHHHHHHHHHHTCEEEEEEEE
T ss_pred CCceEEEEEEEChhhcCCchHHHHHHHHHHHhh-CCCCEEEEecCcCCHHHHHHHHHCCCEEEeEEec
Confidence 367899999999999999999999999999995 4999999988 47999999999999987643
|
| >3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.8e-15 Score=133.38 Aligned_cols=148 Identities=16% Similarity=0.163 Sum_probs=105.1
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC----C------------------cCCHH-----HHHhhc----CcEEEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----V------------------RRTDE-----ELLKAL----DSFYVVER 324 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~----~------------------~~~~e-----~l~~~~----~~~~V~~~ 324 (438)
+.+.||+++++|++.|.+++......... . ..... .+...+ ..++++..
T Consensus 4 m~i~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 83 (187)
T 3pp9_A 4 MSLLIRELETNDLDNFPEIDDSFIVNARLMLSLSKVNRRIEYTVEDVPSYEKSYLQNDNEELVYNEYINKPNQIIYIALL 83 (187)
T ss_dssp -CCEEEECCGGGTTSCCCCCCEEEEEEEEEEEECSSTTCEEEEEEEEEEEEEECC-----CCCGGGGSSCSSEEEEEEEE
T ss_pred eeEEEEeccccchhhHhhccCceEEeeEEEEecccccccceeehhhcchhhhccCCccchHHHHHHHHhCCCcEEEEEEE
Confidence 45789999999999999884332111000 0 00110 122222 24788889
Q ss_pred CCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 325 EGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 325 dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
++++||++.+.+ .....++|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 84 ~~~~vG~~~~~~-~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 162 (187)
T 3pp9_A 84 HNQIIGFIVLKK-NWNNYAYIEDITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNNNVAACKFYEKCGFVIGGF 162 (187)
T ss_dssp TTEEEEEEEEEE-CTTSCEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEEEEEc-CCCCeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCEEece
Confidence 999999999984 4457789999999999999999999999999999999999999888 47999999999999987
Q ss_pred eccchHhhhhhcCCCCceEEEEccCC
Q 013702 401 EMIPEERRKRINLSRNSKYYMKKLLP 426 (438)
Q Consensus 401 ~~lp~~~~~~y~~~r~s~~~~k~ll~ 426 (438)
...... ..+.......+++.+.++
T Consensus 163 ~~~~~~--~~~~~~~e~~~~~~~~l~ 186 (187)
T 3pp9_A 163 DFLVYK--GLNMTSDEVAIYWYLHFD 186 (187)
T ss_dssp ESSGGG--GTCSSSCCCEEEEEEEC-
T ss_pred Eeeecc--CCcccCCcEEEEEEeecC
Confidence 543321 122223445566665554
|
| >2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=7.6e-15 Score=128.00 Aligned_cols=124 Identities=11% Similarity=0.021 Sum_probs=91.8
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHh----hcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK----ALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSP 352 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~----~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p 352 (438)
.+.||+++++|++.+.++........+..+. ...+.. .-...+++..++++||++.+.... ....++..++|+|
T Consensus 3 ~l~ir~~~~~D~~~i~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~-~~~~~i~~~~v~~ 80 (149)
T 2fl4_A 3 EIHFEKVTSDNRKAVENLQVFAEQQAFIESM-AENLKESDQFPEWESAGIYDGNQLIGYAMYGRWQ-DGRVWLDRFLIDQ 80 (149)
T ss_dssp CCCCCCCCTTTHHHHHTCCCTTCHHHHHHHH-HHHHHHHHHCTTEEEEEEEETTEEEEEEEEEECT-TSCEEEEEEEECG
T ss_pred eEEEEECCHHHHHHHHhhcCCHHHHhccCCH-HHHHHHHhcCcccceEEEEECCeEEEEEEEeecC-CCcEEEEEEEECH
Confidence 3568999999999998886332111111000 111111 112356777899999999876432 4567888999999
Q ss_pred cccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 353 ECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 353 ~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
+|||||||++|++.+++++.+. +++.+.+.+ .+|.+||+|+||+..+...
T Consensus 81 ~~~g~Gig~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~~~ 135 (149)
T 2fl4_A 81 RFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGELD 135 (149)
T ss_dssp GGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEEEEC
T ss_pred HHcCCCHHHHHHHHHHHHHHHhCCCCEEEEEEECCCHHHHHHHHHCCCEEecccc
Confidence 9999999999999999999864 799999988 4799999999999988653
|
| >2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.4e-15 Score=140.72 Aligned_cols=141 Identities=17% Similarity=0.192 Sum_probs=106.9
Q ss_pred cccc-cCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecCh
Q 013702 23 NIRR-HGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNT 101 (438)
Q Consensus 23 ~l~~-~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~nina 101 (438)
.|++ +|.+ ++++++.|...+ ++ .++...+..+|+.|.|||++| + +|+. ++++
T Consensus 97 ~l~~~~Gi~----a~~l~~~~~~~v----------------~~--~~~~~~~~~lL~~g~IpVi~g-g---~g~~-~vtt 149 (255)
T 2jjx_A 97 VLTSKTNKE----VRVMTSIPFNAV----------------AE--PYIRLRAVHHLDNGYIVIFGG-G---NGQP-FVTT 149 (255)
T ss_dssp HHHHHCSSC----EEEEESSCCCSS----------------SE--ECCHHHHHHHHHTTCEEEEES-T---TSCS-SCCS
T ss_pred HHHhhcCCc----eEEecHHHcCcc----------------cC--cccHHHHHHHHhCCcEEEEeC-C---CCCC-ccch
Confidence 5667 7775 888888775432 11 345555569999999999998 3 4443 5889
Q ss_pred HHHHHHHHHHcCCCEEEEEe-cCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCC
Q 013702 102 YEVATACALAIEADKLICII-DGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHS 173 (438)
Q Consensus 102 D~~A~~lA~aL~A~~li~lt-dv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (438)
|++|+.+|.+|+||+|+|+| ||+|++ +++++|++|+.+|+.++ |.
T Consensus 150 D~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~---G~------------------------ 202 (255)
T 2jjx_A 150 DYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQ---NI------------------------ 202 (255)
T ss_dssp HHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHHHHT---TC------------------------
T ss_pred HHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHHHHc---CC------------------------
Confidence 99999999999999999999 999873 34899999998776543 32
Q ss_pred CCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHH-HcCCCeEEeecc
Q 013702 174 DSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVC-RRGVQRVHLLDG 252 (438)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~~~~i~~g 252 (438)
| + |.+ +|..+| +.|++ ++|+|+
T Consensus 203 -------------------------------~-~---------------------m~~---~a~~~a~~~gi~-v~I~~~ 225 (255)
T 2jjx_A 203 -------------------------------Q-V---------------------MDQ---AALLLARDYNLP-AHVFNF 225 (255)
T ss_dssp -------------------------------C-S---------------------SCH---HHHHHHHHHTCC-EEEEET
T ss_pred -------------------------------c-c---------------------CHH---HHHHHHHHcCCe-EEEEeC
Confidence 1 3 543 355555 48997 999999
Q ss_pred ccCceeeeehhhcCCCcccccCC
Q 013702 253 TIGGVLLLELFKRDGMGTMVASD 275 (438)
Q Consensus 253 ~~~~~ll~el~~~~g~GT~i~~d 275 (438)
+.|+.+ .+++++++.||.|..+
T Consensus 226 ~~~~~l-~~~l~g~~~GT~I~~~ 247 (255)
T 2jjx_A 226 DEPGVM-RRICLGEHVGTLINDD 247 (255)
T ss_dssp TSTTHH-HHHHBTCCCSEEEESS
T ss_pred CCchHH-HHHhcCCCCceEEecC
Confidence 999975 5667888899999874
|
| >3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.54 E-value=6.2e-14 Score=122.90 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=95.9
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC---CcCCHHHHHhhc--------CcEEEEE-ECCEEEEEEEEeeec-CCCe
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL--------DSFYVVE-REGQIIACAALFPFF-KEKC 342 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~---~~~~~e~l~~~~--------~~~~V~~-~dg~iVG~~~l~~~~-~~~~ 342 (438)
..+.||+++++|++.+.+++.......+. ...+.+....++ ...|++. .++++||++.+.... ....
T Consensus 5 ~~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~ 84 (170)
T 3tth_A 5 KKIRLSALEREDLKFVHELNNNLSIMSYWFEEPYESYRELEDLHIKHIHDQSERRFIIKDLKDNKVGLVELTEIDFIHRR 84 (170)
T ss_dssp CCCEEEECCGGGHHHHHHHHTC--CCEEETTEEECSHHHHHHHHHHHTTCCSCEEEEEECTTCCEEEEEEEEEEETTTTE
T ss_pred CcEEEeeCCHHHHHHHHHHHcCHHHHHhhccCCcccHHHHHHHHHhhccCCCccEEEEEcCCCCEEEEEEEEecccccce
Confidence 34689999999999999997754332221 112444433322 3467777 789999999987654 3457
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+++ .++|+|+|||+|||++|++.+++++.+ .|++.+.+.+ .++.+||+|+||+..+..
T Consensus 85 ~~i-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~~g~~ 147 (170)
T 3tth_A 85 CEF-AIIISPGEEGKGYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKL 147 (170)
T ss_dssp EEE-EEEECTTSCSSCSHHHHHHHHHHHHHHTSCCCEEEEEEETTCHHHHHHHHTTTCEEEEEE
T ss_pred EEE-EEEECccccCCCHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHCCCeEEEEE
Confidence 777 689999999999999999999999966 5999999988 479999999999999863
|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-13 Score=120.52 Aligned_cols=141 Identities=15% Similarity=0.176 Sum_probs=101.9
Q ss_pred CCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCc
Q 013702 283 AKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQG 358 (438)
Q Consensus 283 at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqG 358 (438)
++++|++.+.++. ..+... ....+.+.+.... ..++++..++++||++.+.+.......++..++|+|+|||+|
T Consensus 18 ~~~~d~~~l~~l~-~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~v~~~~rg~G 95 (168)
T 1z4r_A 18 ANRRVLLWLVGLQ-NVFSHQ-LPRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKG 95 (168)
T ss_dssp SCHHHHHHHHHHH-HHHHHH-CTTSCHHHHHHHHTCTTCEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGCSSS
T ss_pred CchhHHHHHHHHH-HhccCc-CccccHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCCceEEEEEEECHHHhCCC
Confidence 4556888888886 333222 1122333333222 457888899999999999876666778999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCC
Q 013702 359 QGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427 (438)
Q Consensus 359 iG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~ 427 (438)
+|++|++.+++++++.|+..+.+.. ..+.+||+|+||+..+.. +......|.....+.++|.+.+++
T Consensus 96 ig~~ll~~~~~~~~~~g~~~~~~~~~~~a~~~y~k~GF~~~~~~--~~~~~~~y~g~~~d~~~m~~~l~~ 163 (168)
T 1z4r_A 96 YGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKV--PKSRYLGYIKDYEGATLMECELNP 163 (168)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHTTEESCCCS--CHHHHTTTSCCCTTCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCChHHHHHHHHCCCcEeecc--ccchhhhhhhhcCCceEEEEecCC
Confidence 9999999999999999999875433 689999999999987653 222222333445677888776653
|
| >1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A | Back alignment and structure |
|---|
Probab=99.54 E-value=2.5e-13 Score=119.78 Aligned_cols=126 Identities=10% Similarity=0.071 Sum_probs=94.3
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHc-----CcC-CcCCHHH----HHh-------hcCcEEEEEECCEEEEEEEEeee
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVES-----GAL-VRRTDEE----LLK-------ALDSFYVVEREGQIIACAALFPF 337 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~-----~~~-~~~~~e~----l~~-------~~~~~~V~~~dg~iVG~~~l~~~ 337 (438)
...+.||+++++|++.+.+++...... ... .+.+.++ +.. ....++++..++++||++.+.+.
T Consensus 11 ~~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 90 (182)
T 1s7k_A 11 STTLELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNAI 90 (182)
T ss_dssp SSSEEEEECCGGGHHHHHHHHHHC-------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEEE
T ss_pred CCcEEEEECCHHHHHHHHHHHHhCHHHhhccCCCccccCCHHHHHHHHHHHHHHHhcCCceEEEEEECCEEEEEEEEEEc
Confidence 345789999999999999998743221 000 1112111 221 12457888899999999999865
Q ss_pred c-CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 338 F-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 338 ~-~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
. ....+++ .++|+|+|||+|+|++|++.+++++++ .|++.+.+.+ .++.+||+|+||+..+..
T Consensus 91 ~~~~~~~~i-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~ 159 (182)
T 1s7k_A 91 EPINKAAYI-GYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCM 159 (182)
T ss_dssp ETTTTEEEE-EEEECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCCceEEE-EEEECHhhcCCCHHHHHHHHHHHHHHhhCCccEEEEEecCCCHHHHHHHHHCCCEEEeee
Confidence 4 3467777 489999999999999999999999987 8999999887 479999999999998754
|
| >3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016 transferase, center for structural genomics of infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae} SCOP: d.108.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=6.9e-14 Score=123.11 Aligned_cols=124 Identities=19% Similarity=0.230 Sum_probs=96.0
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcC--Cc-CCHHHHHhhc--------CcEEEEE-ECCEEEEEEEEeeecC-CCeE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGAL--VR-RTDEELLKAL--------DSFYVVE-REGQIIACAALFPFFK-EKCG 343 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~--~~-~~~e~l~~~~--------~~~~V~~-~dg~iVG~~~l~~~~~-~~~~ 343 (438)
.+.||+++++|++.+.+++.......+. .+ .+.+....++ ..++++. .++++||++.+.+... ...+
T Consensus 7 ~i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~ 86 (176)
T 3eg7_A 7 QLTLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVEDAQKNLIGLVELIEINYIHRSA 86 (176)
T ss_dssp TCEEEECCGGGHHHHHHHHTTTCSCEEETTEEECSHHHHHHHHHHSTTCTTCEEEEEECTTCCEEEEEEEEEEETTTTEE
T ss_pred eEEEeeCCHHHHHHHHHHHcCHHHHhhhccccccCHHHHHHHHHHHhcCCCccEEEEEecCCCEEEEEEEEecCcccCce
Confidence 4689999999999999997654222111 11 2333333322 3467777 7899999999986543 4677
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
++ .++|+|+|||+|||++|++.+++++++. |++.+.+.+ ..+.+||+|+||+..+..
T Consensus 87 ~~-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~ 148 (176)
T 3eg7_A 87 EF-QIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHL 148 (176)
T ss_dssp EE-EEEECGGGTTSSCHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EE-EEEECHHHhCCCHHHHHHHHHHHHHHHhCCccEEEEEehhcCHHHHHHHHHCCCEEeeee
Confidence 77 5999999999999999999999999874 999999988 479999999999998863
|
| >2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=4.3e-14 Score=122.34 Aligned_cols=131 Identities=20% Similarity=0.155 Sum_probs=98.1
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHH--hhcCcEEEEEE-CCEEEEEEEEeeecCCCeEEEEEEEECccc
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALDSFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVSPEC 354 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~--~~~~~~~V~~~-dg~iVG~~~l~~~~~~~~~~I~~v~V~p~y 354 (438)
+.||.++..|.+.+.++......... +... ......+++.+ ++++||++.+.. ....++|..++|+|+|
T Consensus 16 m~ir~~~~~d~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~--~~~~~~i~~~~v~p~~ 87 (152)
T 2g3a_A 16 MNFVLSDVADAEAEKAIRDPLVAYNL------ARFGESDKRDLNITIRNDDNSVTGGLVGHT--ARGWLYVQLLFVPEAM 87 (152)
T ss_dssp CCCCCCCSCCHHHHHHHHHHHHHHHH------HHHCCCCCEEEEEEEECTTCCEEEEEEEEE--ETTEEEEEEEECCGGG
T ss_pred CeEEEecCCCHHHHHHHHHHHHHhhh------hhcCCCCccceEEEEEeCCCeEEEEEEEEE--eCCEEEEEEEEECHHH
Confidence 46888999998888888765433110 0000 11123344444 899999999875 4578999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEcc
Q 013702 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 355 RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
||+|||++|++.+++++++.|++.+.+.+ .++.+||+|+||+..+... .| ....+.++|+|-
T Consensus 88 rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~~~y~k~GF~~~~~~~-------~~-~~~~~~~~m~k~ 151 (152)
T 2g3a_A 88 RGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKIGSLG-------PL-SSGQSITWLEKR 151 (152)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTCEEEEEEC-------CC-TTSCCEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHHHCCCCEEEEEecCccHHHHHHHCCCEEeeecc-------CC-CCCcEEEEEEec
Confidence 99999999999999999999999999988 5799999999999988642 12 234566777653
|
| >3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-13 Score=123.31 Aligned_cols=128 Identities=18% Similarity=0.236 Sum_probs=95.7
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcC--c-CCcCC-----HHHHHhhc--CcEEEEEECCEEEEEEEEeeec------
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESG--A-LVRRT-----DEELLKAL--DSFYVVEREGQIIACAALFPFF------ 338 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~--~-~~~~~-----~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~------ 338 (438)
...+.||+++.+|++.|.+++....... + ...|. .+.+...+ ..+++++.++++||++.+....
T Consensus 16 ~~~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~ 95 (188)
T 3h4q_A 16 YFQGMIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDD 95 (188)
T ss_dssp ---CCEEECCGGGHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHTTCEEEEEETTEEEEEEEEESCCCGGGGG
T ss_pred ceeEEEEecCHhhHHHHHHHHHHHHHHHHhccccccccCCCcHHHHHHhhccCcEEEEEECCEEEEEEEEEccCcccccc
Confidence 3457899999999999999998762111 1 01122 34444444 4688999999999999996421
Q ss_pred ------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccc
Q 013702 339 ------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 339 ------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp 404 (438)
....++|..++|+|+| ||||++|++++++++++.|++.+.+.+ ..+.+||+|+||+.++...++
T Consensus 96 ~~w~~~~~~~~~i~~l~V~p~~--~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 169 (188)
T 3h4q_A 96 IDWPVNREGAFVIHRLTGSKEY--KGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLME 169 (188)
T ss_dssp SCCSSCCTTCEEEEEEECCSSC--TTHHHHHHHHHHHHHHHTTCCEEEEEGGGSCGGGTHHHHHTTCEEC------
T ss_pred cccccCCCCeEEEEEEEECCcc--CcHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCeEeceEEec
Confidence 2456889999999999 999999999999999999999999997 478999999999999876443
|
| >4fd5_A Arylalkylamine N-acetyltransferase 2; GNAT; 1.64A {Aedes aegypti} PDB: 4fd6_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-13 Score=128.14 Aligned_cols=128 Identities=16% Similarity=0.104 Sum_probs=96.5
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcC--------cC-CcCCHHHHHh----hc--CcEEEEEE-CCEEEEEEEEeeec-
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESG--------AL-VRRTDEELLK----AL--DSFYVVER-EGQIIACAALFPFF- 338 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~--------~~-~~~~~e~l~~----~~--~~~~V~~~-dg~iVG~~~l~~~~- 338 (438)
+.+.||+++++|++++.+++...+... .. .+...+.+.. .+ ...+++.+ +|++||++...+..
T Consensus 7 ~~~~iR~a~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~ 86 (222)
T 4fd5_A 7 NNIRFETISSKYYDDVIEHLRQTFFADEPLNKAVNLTRPGQGHPLLEQHSLSTLKDNVSIMAISNDGDIAGVALNGILYG 86 (222)
T ss_dssp CCCEEEECCGGGHHHHHHHHHHHTTTTSHHHHHTTCCCTTTCCHHHHHHHHHHHTTSCCEEEECTTSCEEEEEEEEEEET
T ss_pred CCEEEEECCHHHHHHHHHHHHHhcCCCCccchhhcccCCCcccHHHHHHHHHHHhCCcEEEEEeCCCCEEEEEEeccccC
Confidence 346899999999999999987754211 11 1112222222 12 34566655 79999999866543
Q ss_pred ----------------------------------------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 339 ----------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 339 ----------------------------------------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
....++|..++|+|+|||+|||++|++.+++++++.|+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~ 166 (222)
T 4fd5_A 87 NTDIEKSREKLNEIQDESFKKIFKLLYEQNLKINLFKQFDVDKIFEIRILSVDSRFRGKGLAKKLIEKSEELALDRGFQV 166 (222)
T ss_dssp TSCTTHHHHHHHHCCCHHHHHHHHHHHHHHTTCCHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCE
T ss_pred CccHHHHHHHHhhccChhHHHHHHHHHHHHhhcchhhhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCE
Confidence 1357889999999999999999999999999999999998
Q ss_pred EEEEc--HHHHHHHHHCCCeEeceecc
Q 013702 379 LFLLT--TRTADWFKSRGFRECSIEMI 403 (438)
Q Consensus 379 l~l~t--~~a~~fY~k~GF~~~g~~~l 403 (438)
+.+.+ ..+.+||+|+||+..+...+
T Consensus 167 ~~~~~~~~~~~~~y~~~Gf~~~~~~~~ 193 (222)
T 4fd5_A 167 MKTDATGAFSQRVVSSLGFITKCEINY 193 (222)
T ss_dssp EEEEECSHHHHHHHHHTTCEEEEEEEG
T ss_pred EEEEeCCHHHHHHHHHCCCEEEEEEch
Confidence 87766 57899999999999986543
|
| >3juw_A Probable GNAT-family acetyltransferase; structural genomics, APC60242, acetyltransferas protein structure initiative; HET: MSE; 2.11A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.52 E-value=7.8e-14 Score=122.84 Aligned_cols=124 Identities=15% Similarity=0.111 Sum_probs=93.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc-CCcCCHHHHHhhc-----------CcEEEEEE--CCEEEEEEEEeeecC---
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA-LVRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPFFK--- 339 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~-~~~~~~e~l~~~~-----------~~~~V~~~--dg~iVG~~~l~~~~~--- 339 (438)
.+.||+++++|++.+.++ +...... ..+.+.++...++ ..+|++.. ++++||++.+.....
T Consensus 15 ~l~ir~~~~~D~~~l~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~~~~ 92 (175)
T 3juw_A 15 RLVLEPQSMARFDQWFAM--ERQRDEAGHRDLTEDQAWLRLCARQGMWDAYACGFYYLLDPVSGEMRGEAGFQFRRRGFG 92 (175)
T ss_dssp SCEEEECCGGGHHHHHHH--HHHSCSTTTTTCCHHHHHHHHHHHHHHHHHHSCCEEEEECTTTCCEEEEEEEECCCCSSC
T ss_pred ceEecCCCHHHHHHHHHH--HHHHHhcCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEEECCCCcEEEEeeeEEeecccc
Confidence 468999999999999999 2222221 1344555543332 12455553 799999999986321
Q ss_pred ---CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEeceecc
Q 013702 340 ---EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMI 403 (438)
Q Consensus 340 ---~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~~l 403 (438)
...+++ .++|+|+|||+|||++|++.+++++++. |++.+.+.+ ..+++||+|+||+..+....
T Consensus 93 ~~~~~~~~~-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~ 163 (175)
T 3juw_A 93 PGFDNHPEA-AWAVASAHQGRGLAAEAMQALLAHHDRSSGRQRVVALIARSNLPSLRLAERLGFRGYSDVAF 163 (175)
T ss_dssp TTTTTSCEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHHTSCCEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCCCceE-EEEECHHHhCCCHHHHHHHHHHHHHHhCCCCceEEEEECCCChhHHHHHHHcCCeEecceee
Confidence 145666 5899999999999999999999999885 999999888 48999999999999987654
|
| >3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.4e-13 Score=120.52 Aligned_cols=125 Identities=14% Similarity=0.102 Sum_probs=94.8
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcC--CcCC--HHHHHhh-c----C-cEEEEE---ECCEEEEEEEEeeecCCC
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGAL--VRRT--DEELLKA-L----D-SFYVVE---REGQIIACAALFPFFKEK 341 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~--~~~~--~e~l~~~-~----~-~~~V~~---~dg~iVG~~~l~~~~~~~ 341 (438)
...+.||+++++|++.+.+++.......+. .+.+ .+.+... . . .++++. .++++||++.+.+.....
T Consensus 11 ~~~i~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~ 90 (164)
T 3eo4_A 11 DSKIIIRQITDNDLELLMAWRSNPLIYKFFYIQKEPLKWEEHYSWWMSRENRVDWIILLRENNTIRKVGSVNVSQLNTDN 90 (164)
T ss_dssp -CEEEEEECCGGGHHHHHHHHTCHHHHTTSTTCCSCCCHHHHHHHHHHCCSCEEEEEEEEETTEEEEEEEEEEECTTSSS
T ss_pred cCcEEEEECCHHHHHHHHHHHcCHHHHHhccCCCCChhHHHHHHHHhcCCCCceEEEEEEecCCCcEEEEEEEEecCCCc
Confidence 345789999999999999998653322211 1112 3333332 1 2 344444 578999999998654444
Q ss_pred eEEEEEEEECc-cccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 342 CGEVAAIGVSP-ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 342 ~~~I~~v~V~p-~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+++ .++|+| +|||+|||++|++.+++++++.|++.+.+.+ .++++||+|+||+..+..
T Consensus 91 -~~i-~~~v~~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 153 (164)
T 3eo4_A 91 -PEI-GILIGEFFLWGKHIGRHSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESLGFKKTKKG 153 (164)
T ss_dssp -CEE-EEEECSTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEC
T ss_pred -EEE-EEEEcCHHHcCccHHHHHHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHCCCEEEeee
Confidence 777 789998 9999999999999999999999999999988 579999999999998865
|
| >2qec_A Histone acetyltransferase HPA2 and related acetyltransferases; NP_600742.1, acetyltransferase (GNAT) family; 1.90A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.5e-13 Score=121.51 Aligned_cols=139 Identities=18% Similarity=0.167 Sum_probs=100.0
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCc-----CCcC--CHH---H-HHh-------hcCcEEEEEE-CCEEEEEEEEee
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGA-----LVRR--TDE---E-LLK-------ALDSFYVVER-EGQIIACAALFP 336 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~-----~~~~--~~e---~-l~~-------~~~~~~V~~~-dg~iVG~~~l~~ 336 (438)
|.+.||+++.+|++.+.+++...+.... ..+. ..+ . +.. ....+++++. ++++||++.+.+
T Consensus 2 M~~~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~ 81 (204)
T 2qec_A 2 MSPTVLPATQADFPKIVDVLVEAFANDPTFLRWIPQPDPGSAKLRALFELQIEKQYAVAGNIDVARDSEGEIVGVALWDR 81 (204)
T ss_dssp CCCEEEECCGGGHHHHHHHHHHHHTTCHHHHTTSCSCCGGGHHHHHHHHHHHHHTHHHHEEEEEEECTTSCEEEEEEEEC
T ss_pred CccEEecCCHHHHHHHHHHHHHHhhcChhhEEEeCCCchhHHHHHHHHHHHHhhhcccCceEEEEECCCCCEEEEEEEeC
Confidence 3468999999999999999876543211 1111 111 1 111 1235778888 899999999875
Q ss_pred ec--------------------------------------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 337 FF--------------------------------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 337 ~~--------------------------------------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
.. ....+++..++|+|+|||+|||++|++.+++++++. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~---~ 158 (204)
T 2qec_A 82 PDGNHSAKDQAAMLPRLVSIFGIKAAQVAWTDLSSARFHPKFPHWYLYTVATSSSARGTGVGSALLNHGIARAGDE---A 158 (204)
T ss_dssp CC------------CCHHHHHC-CCC---------CTTSCSSCCEEEEEEEECGGGTTSSHHHHHHHHHHHHHTTS---C
T ss_pred CCCCcchhHHHhhhhHHHHHhCccHHHHHHHHHHHHhhCCCCCeEEEEEEEEChhhcCCCHHHHHHHHHHHHhhhC---C
Confidence 32 235678999999999999999999999999999877 4
Q ss_pred EEEEc--HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccC
Q 013702 379 LFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 425 (438)
Q Consensus 379 l~l~t--~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll 425 (438)
+++.+ ..+.+||+|+||+..+...++. ...+.+.|.+..
T Consensus 159 ~~v~~~n~~a~~~y~k~GF~~~~~~~~~~--------~~~~~~~m~~~~ 199 (204)
T 2qec_A 159 IYLEATSTRAAQLYNRLGFVPLGYIPSDD--------DGTPELAMWKPP 199 (204)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEEEECCSS--------CSSCEEEEEECC
T ss_pred eEEEecCccchHHHHhcCCeEeEEEEcCC--------CCeEEEEEEeCC
Confidence 55555 5899999999999998765431 223456666543
|
| >1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-13 Score=120.09 Aligned_cols=125 Identities=13% Similarity=0.073 Sum_probs=96.9
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHc--CcC----CcCCHHHHHh-hc-----------CcEEEEEECCEEEEEEEEeee
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVES--GAL----VRRTDEELLK-AL-----------DSFYVVEREGQIIACAALFPF 337 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~--~~~----~~~~~e~l~~-~~-----------~~~~V~~~dg~iVG~~~l~~~ 337 (438)
..+.||+++++|++.+.+++...... .+. .+.+.++... ++ ..++++..++++||++.+.+.
T Consensus 9 ~~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 88 (184)
T 1nsl_A 9 EHITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNL 88 (184)
T ss_dssp SSEEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEeCCHHHHHHHHHHHHcCHHHHhhcccccCCCCCHHHHHHHHHHHHHHhhhccCceEEEEEECCEEEEEEEEEec
Confidence 34689999999999999998763211 111 1234444433 22 357888889999999999864
Q ss_pred c-CCCeEEEEEEEECccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 338 F-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 338 ~-~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
. ....+++ .++|+|+|||+|||++|++.+++++ ++.|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 89 ~~~~~~~~i-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~~ 157 (184)
T 1nsl_A 89 DQVNRKAEI-GYWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEGKA 157 (184)
T ss_dssp ETTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred ccccCeEEE-EEEEChhhcCCCHHHHHHHHHHHHHHHhcCcEEEEEEEecCCHHHHHHHHHcCCEEEEEe
Confidence 4 3457777 5699999999999999999999999 468999999888 479999999999998864
|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-13 Score=119.37 Aligned_cols=146 Identities=15% Similarity=0.247 Sum_probs=103.7
Q ss_pred eEEEECCccCHHHHHHHHHHH---HHcCcCCcCCHHHHHhhc-----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 349 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~---~~~~~~~~~~~e~l~~~~-----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~ 349 (438)
++||.++.++.+.....+... +... ...++.+.+.... ..++++..++++||++.+.+.......++..++
T Consensus 1 i~~r~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~i~~~~ 79 (160)
T 1qst_A 1 LDFDILTNDGTHRNMKLLIDLKNIFSRQ-LPKMPKEYIVKLVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAEVAFLA 79 (160)
T ss_dssp CEEEEECCCSCHHHHHHHHHHHHHHHHH-CTTSCHHHHHHHHTSSSEEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEE
T ss_pred CceEEecCCcchHHHHHHHHHHHHhhhh-cchhHHHHHHHHhhCCCCceEEEEecCCEEEEEEEEEEecCCCeEEEEEEE
Confidence 367888877666555544332 2222 2334554444332 235566667899999999876666778999999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCC
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 426 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~ 426 (438)
|+|+|||+|+|++|++.+++++++.|++.+.+.. +.+.+||+|+||+..+.. +......|..+..+.++|.+.+.
T Consensus 80 v~~~~rg~Gig~~ll~~~~~~~~~~g~~~l~~~~~n~a~~~y~k~Gf~~~~~~--~~~~~~~~~~~~~~~~~m~~~l~ 155 (160)
T 1qst_A 80 VTANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTKEHRM--PQEKWKGYIKDYDGGTLMECYIH 155 (160)
T ss_dssp ECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHTTCBSSCSS--CHHHHTTTSCCCSSSEEEEEECC
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEeCcchhHHHHHHCCCEEeeee--ccccceeEEecCCCceEEeeecc
Confidence 9999999999999999999999999999887554 468999999999988754 22333344444556677766553
|
| >2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=125.78 Aligned_cols=126 Identities=11% Similarity=0.008 Sum_probs=96.8
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc-----------CcEEEEE--ECCEEEEEEEEeeecCCCe
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVE--REGQIIACAALFPFFKEKC 342 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~-----------~~~~V~~--~dg~iVG~~~l~~~~~~~~ 342 (438)
..+.||+++++|++.+.+++..........+.+.++....+ ..++++. .++++||++.+........
T Consensus 33 ~~l~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~iG~~~~~~~~~~~~ 112 (195)
T 2fsr_A 33 ERLTLRPLAMADFPAYRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPE 112 (195)
T ss_dssp SSEEEECCCGGGHHHHHHHHHSGGGGGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSS
T ss_pred ccEEEEcCCHHHHHHHHHHHcCCCceecCCCCCHHHHHHHHHHHHhccccCCceEEEEEECCCCCEEEEEeeEecCCCCe
Confidence 34689999999999999998764441111233433322211 2245555 3789999999986544567
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
+++ .++|+|+|||+|||++|++.+++++++ .|++.+.+.+ .++.+||+|+||+..+...
T Consensus 113 ~~i-~~~v~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~ 176 (195)
T 2fsr_A 113 KEL-GWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLAP 176 (195)
T ss_dssp CEE-EEEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEECTTSC
T ss_pred EEE-EEEEChhHcCCChHHHHHHHHHHHHHhhCCccEEEEEECCCCHHHHHHHHHCCCEEEeeec
Confidence 788 789999999999999999999999987 7999999888 5799999999999988653
|
| >3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-14 Score=153.26 Aligned_cols=113 Identities=19% Similarity=0.210 Sum_probs=88.4
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcC-cccCCCC--Ceeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSN-LGYSSSG--EVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~-i~~~~~g--~~~ni 99 (438)
.|+++|.+ |+++++.+.++++....+ .+++..++++.|+.+|+.|.|||+++ +|.+++| .+.++
T Consensus 84 ~l~~~G~~----a~~l~~~~~~l~~~~~~~---------~~~~~~~~~~~i~~ll~~g~IpVv~Gf~g~~~~g~~~~~tl 150 (600)
T 3l76_A 84 ALQEIDQP----AISLTGAQVGIVTEAEHS---------RARILEIRPDRLEHHLREGKVVVVAGFQGISSVEHLEITTL 150 (600)
T ss_dssp HHHHTTCC----EEEEEGGGTEEEEC----------------CCEEEECCHHHHHTTTCEEEEECEEEC----CEEEECC
T ss_pred HHHhCCCC----eEEechhHcceEEecCCC---------CceeccccHHHHHHHHhCCCEEEEECCeecCCCCCEEEecC
Confidence 67888876 999999999999866432 45778889999999999999999986 4888888 44444
Q ss_pred ---ChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 100 ---NTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 100 ---naD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
++|++|+.+|.+|+||+|+++|||+|++ +++++|++++++|+.+|...|
T Consensus 151 grGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela~~G 209 (600)
T 3l76_A 151 GRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLG 209 (600)
T ss_dssp CTTHHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTGGGG
T ss_pred CCCChHHHHHHHHHHcCCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHHhCC
Confidence 3899999999999999999999999873 358999999999999886443
|
| >2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.8e-14 Score=128.71 Aligned_cols=123 Identities=17% Similarity=0.211 Sum_probs=96.4
Q ss_pred ceeEEEECCccCHHH-HHHHHHHHHHcCcCCcCCHHHHHhhc---------CcEEEEE-ECCEEEEEEEEeeec-----C
Q 013702 276 LYEGTRTAKVTDLSG-IKQIIQPLVESGALVRRTDEELLKAL---------DSFYVVE-REGQIIACAALFPFF-----K 339 (438)
Q Consensus 276 ~~~~IR~at~~D~~~-I~~L~~~~~~~~~~~~~~~e~l~~~~---------~~~~V~~-~dg~iVG~~~l~~~~-----~ 339 (438)
..+.||+++.+|++. +.+++...... .+++.+.+...+ ..++++. .++++||++.+.... .
T Consensus 46 ~~~~iR~~~~~D~~~~i~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~ 122 (190)
T 2vez_A 46 ADYTIRPLCRSDYKRGYLDVLRVLTTV---GDINEEQWNSRYEWIRARSDEYYLLVVCDGEGRIVGTGSLVVERKFIHSL 122 (190)
T ss_dssp TTCEEEECCGGGGGGTHHHHHTTTSCC---CCCCHHHHHHHHHHHHTTTTTEEEEEEECTTSCEEEEEEEEEEECSHHHH
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhcc---cCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCcEEEEEEEEeccccccCC
Confidence 346899999999999 99997754322 234444443321 1345566 379999999987532 3
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
...++|..++|+|+|||||||++|++++++++++.|+..+.+.+ ..+.+||+|+||+..+..
T Consensus 123 ~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~~y~k~GF~~~~~~ 185 (190)
T 2vez_A 123 GMVGHIEDIAVEKGQQGKKLGLRIIQALDYVAEKVGCYKTILDCSEANEGFYIKCGFKRAGLE 185 (190)
T ss_dssp CEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCSEEECCCCGGGHHHHHHTTCCCCCCC
T ss_pred CceEEEEEEEEchhhcCCCHHHHHHHHHHHHHHHcCCeEEEEEeccchHHHHHHCCCeehHHh
Confidence 46789999999999999999999999999999999999999887 456799999999987754
|
| >3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=6.8e-13 Score=118.50 Aligned_cols=126 Identities=6% Similarity=-0.002 Sum_probs=98.6
Q ss_pred CceeEEEECCccCHHHHHHHHHHH--HHcCcC---C-cCCHHHHHhhc-----------CcEEEEEECCEEEEEEEEeee
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPL--VESGAL---V-RRTDEELLKAL-----------DSFYVVEREGQIIACAALFPF 337 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~--~~~~~~---~-~~~~e~l~~~~-----------~~~~V~~~dg~iVG~~~l~~~ 337 (438)
...+.||+++++|++.+.+++... ....+. . ..+.++...++ ..++++..++++||++.+...
T Consensus 19 ~~~l~lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~ 98 (188)
T 3r9f_A 19 NDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNII 98 (188)
T ss_dssp SSSEEEECCCGGGHHHHHHHHHHHHHHHHTTCSGGGGCCSHHHHHHHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEE
T ss_pred CCcEEEEeCCHHHHHHHHHHHhcChHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhhccCeEEEEEEECCEEEEEEEEEEe
Confidence 345689999999999999998752 222111 1 13445544433 236788889999999999754
Q ss_pred c-CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 338 F-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 338 ~-~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
. ....++++ ++|+|+|||+|+|++|++.+++++.+. |++.+.+.+ .++++||+|+||+..+..
T Consensus 99 ~~~~~~~~i~-~~v~~~~~g~Gig~~ll~~~~~~a~~~~~~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 167 (188)
T 3r9f_A 99 DHANKTAYIG-YWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVL 167 (188)
T ss_dssp ETTTTEEEEE-EEECGGGTTSSHHHHHHHHHHHHHHTTTSCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCEEEEE-EEEChhhcCCCHHHHHHHHHHHHHHHhcCeEEEEEEecCCCHHHHHHHHHCCCeEEeEe
Confidence 3 35788885 699999999999999999999999765 999999988 579999999999998854
|
| >3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.51 E-value=4.2e-14 Score=127.32 Aligned_cols=122 Identities=16% Similarity=0.101 Sum_probs=95.9
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHh----hcCcEEEEEE-CCEEEEEEEEeeec-CCCeEEEEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK----ALDSFYVVER-EGQIIACAALFPFF-KEKCGEVAAIG 349 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~----~~~~~~V~~~-dg~iVG~~~l~~~~-~~~~~~I~~v~ 349 (438)
+.+.||+++.+|++.+.+++...+... ......... ....+++++. ++++||++.+.... ....++|..++
T Consensus 25 ~~~~ir~~~~~D~~~i~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~i~~l~ 101 (189)
T 3d3s_A 25 LRYHLRPPRRNDGAAIHQLVSECPPLD---LNSLYAYLLLCEHHAHTCVVAESPGGRIDGFVSAYLLPTRPDVLFVWQVA 101 (189)
T ss_dssp -CCEEECCCGGGHHHHHHHHHTSTTSC---CCCHHHHHHHHHHCGGGCEEEECTTSCEEEEEEEEECSSCTTEEEEEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHccccC---chhhHHHHHhccCCCceEEEEECCCCEEEEEEEEEEcCCCCCceEEEEEE
Confidence 446899999999999999987642221 111111111 1245678888 89999999988653 34678999999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
|+|+|||+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 102 V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~Gf~~~~~ 156 (189)
T 3d3s_A 102 VHSRARGHRLGRAMLGHILERQECRHVRHLETTVGPDNQASRRTFAGLAGERGAH 156 (189)
T ss_dssp ECGGGTTSCHHHHHHHHHHHSGGGTTCCEEEEEECTTCHHHHHHHHHHHHTTTCE
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHcCCccccc
Confidence 9999999999999999999999999999998887 47999999999986553
|
| >3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.50 E-value=8e-14 Score=124.90 Aligned_cols=122 Identities=17% Similarity=0.156 Sum_probs=88.8
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcC-cCCcCCHHHHHhhc-----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 349 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~~-----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~ 349 (438)
.+++||+++.+|.+.+.++........ .....+.+.+...+ ..+++++.++++||++.+... .+.++|..++
T Consensus 3 ~~~~ir~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~--~~~~~i~~l~ 80 (181)
T 3ey5_A 3 AMIRFQPITTSDVQHYKFMEELLVESFPPEEYRELEHLREYTDRIGNFHNNIIFDDDLPIGFITYWDF--DEFYYVEHFA 80 (181)
T ss_dssp --CEEEECCTTSHHHHHHHHHHHHHHSCGGGSCCHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEC--SSCEEEEEEE
T ss_pred CceEEEECccccHHHHHHHHHHHHHhCCccccchHHHHHHHhccCCCeEEEEEEECCEEEEEEEEEEc--CCeEEEEEEE
Confidence 457899999999987777765533221 11222333443333 347888999999999999854 5679999999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHHCCCeEecee
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t------~~a~~fY~k~GF~~~g~~ 401 (438)
|+|+|||+|||++|++.++++++... .+.+.. .++.+||+|+||+..+..
T Consensus 81 V~p~~rg~GiG~~Ll~~~~~~a~~~~--~l~v~~~~~~~n~~a~~fY~k~GF~~~~~~ 136 (181)
T 3ey5_A 81 TNPALRNGGYGKRTLEHLCEFLKRPI--VLEVERPVEEMAKRRINFYQRHGFTLWEKD 136 (181)
T ss_dssp ECGGGTTSSHHHHHHHHHHHHCCSCE--EEEECCTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EchhhcCCCHHHHHHHHHHHhhhhCe--EEEEeCCCccchHHHHHHHHHCCCEECCcc
Confidence 99999999999999999999997222 222222 257999999999999843
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.49 E-value=4.9e-13 Score=129.59 Aligned_cols=121 Identities=14% Similarity=0.095 Sum_probs=98.0
Q ss_pred cCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHH-------HHHh-hcCcEEEEEECCEEEEEEEEeeecCCCeEE
Q 013702 273 ASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE-------ELLK-ALDSFYVVEREGQIIACAALFPFFKEKCGE 344 (438)
Q Consensus 273 ~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e-------~l~~-~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~ 344 (438)
.....+.||+++++|++.+.+|+... ..+ +...+ .+.. ....+++++.++++||++.+.++. ..++
T Consensus 15 ~~~~~~~iR~~~~~D~~~i~~l~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~--~~~~ 88 (288)
T 3ddd_A 15 LYFQGMIIRYATPDDIEDMVSIFIDA--YNF--PGPRESVKSSFEISLEVQPDGCLLAFLKDEPVGMGCIFFYN--KQAW 88 (288)
T ss_dssp CCSTTCEEEECCGGGHHHHHHHHHHH--HTC--CSCHHHHHHHHHHHHHHCTTCEEEEEETTEEEEEEEEEECS--SEEE
T ss_pred CCCCCcEEEECCHHHHHHHHHHHHhc--cCC--CCchhhhHHHHHHHHhCCCCEEEEEEECCEEEEEEEEEEEC--CEEE
Confidence 34566799999999999999998741 222 22222 1111 225678999999999999988654 7899
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEece
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSI 400 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~ 400 (438)
|..++|+|+|||||||++|+++++++++ .+++.+.+.+ ..+.+||+|+||+..+.
T Consensus 89 i~~~~V~p~~rg~Gig~~Ll~~~~~~~~-~~~~~~~l~~n~~a~~~y~k~Gf~~~~~ 144 (288)
T 3ddd_A 89 IGLMGVKKAYQRRGIGTEVFRRLLEIGR-RKVDTIRLDASSQGYGLYKKFKFVDEYR 144 (288)
T ss_dssp EEEEEECGGGCSSSHHHHHHHHHHHHHH-HHCSEEEEEECTTTHHHHHHTTCEEEEE
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHH-cCCcEEEEEeCHHHHHHHHHCCCEEece
Confidence 9999999999999999999999999999 8889988877 57899999999998875
|
| >3qb8_A A654L protein; GNAT N-acetyltransferase, acetyltransferase, COA, spermine, spermidine, transferase; HET: COA; 1.50A {Paramecium bursaria chlorella virus 1} | Back alignment and structure |
|---|
Probab=99.49 E-value=6.4e-14 Score=125.79 Aligned_cols=126 Identities=13% Similarity=0.167 Sum_probs=90.1
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc-CCc-CC------HHHHH----hhc--CcEEE-EEECCEEEEEEEEeee----
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA-LVR-RT------DEELL----KAL--DSFYV-VEREGQIIACAALFPF---- 337 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~-~~~-~~------~e~l~----~~~--~~~~V-~~~dg~iVG~~~l~~~---- 337 (438)
++.||+++++|++.+.+++...+.... ... .. .+.+. ..+ ...++ +..++++||++...+.
T Consensus 1 m~~ir~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ivG~~~~~~~~~~~ 80 (197)
T 3qb8_A 1 MYTLIKLTSEYTSRAISFTSRNFVASEPTSIALKLTTCDFTTSFQNIMKQCVDYGHSFAFVDADDNIKAQILNIPYDAYE 80 (197)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHHCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEEECTTCCEEEEEEEEEHHHHH
T ss_pred CcEEEECCHHHHHHHHHHHHHhccccCcHHHHhCCCcchHHHHHHHHHHHHHhcCceEEEEcCCCCEEEEEEecCCcccc
Confidence 368999999999999999865432111 100 00 11111 111 33455 4678999999654432
Q ss_pred -c-----CCCe-------------EEEE---EEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHHC
Q 013702 338 -F-----KEKC-------------GEVA---AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSR 393 (438)
Q Consensus 338 -~-----~~~~-------------~~I~---~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k~ 393 (438)
. .... ++|. .++|+|+|||||||++|++.++++|++.|+..+.+.+ ..+.+||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~n~~a~~~y~k~ 160 (197)
T 3qb8_A 81 NMHYGNIRETDPMFDLFGNLDSYTPDDKCLYVFAIGSEVTGKGLATKLLKKTIEESSSHGFKYIYGDCTNIISQNMFEKH 160 (197)
T ss_dssp TCCCCCCGGGHHHHHHHHGGGGSCCSSCEEEEEEEEESSCSSSHHHHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhcCcCcceeeEeeeceEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHC
Confidence 0 0111 4555 8999999999999999999999999999999999887 5789999999
Q ss_pred CCeEeceec
Q 013702 394 GFRECSIEM 402 (438)
Q Consensus 394 GF~~~g~~~ 402 (438)
||+..+...
T Consensus 161 GF~~~~~~~ 169 (197)
T 3qb8_A 161 GFETVGSVK 169 (197)
T ss_dssp TCEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999998654
|
| >1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=7.3e-13 Score=119.38 Aligned_cols=125 Identities=12% Similarity=0.039 Sum_probs=95.7
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC-C--cCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeec-CCCeEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL-V--RRTDEELLKAL-------DSFYVVEREGQIIACAALFPFF-KEKCGE 344 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~-~--~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~-~~~~~~ 344 (438)
..+.||+++++|++.+ +++.......+. . +...+.+.... ...+++..++++||++.+.... ....++
T Consensus 20 ~~i~lr~~~~~D~~~l-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~~~~~~~~~~ 98 (197)
T 1yre_A 20 GALRLEPLVEADIPEL-VSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACE 98 (197)
T ss_dssp TTEEEEECCGGGHHHH-HHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEE
T ss_pred CcEEEecCChhhHHHH-HhhcChhhhhccCCCchhHHHHHHHHHHhhccCCeEEEEEEECCeEEEEEEEEeecCCcCeeE
Confidence 3468999999999999 998553321111 1 11222222211 2356667899999999987543 346889
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+..++|+|+|||+|||++|++.+++++.+ .|++.+.+.+ ..+.+||+|+||+..+..
T Consensus 99 i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 160 (197)
T 1yre_A 99 IGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVL 160 (197)
T ss_dssp EEEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEECHhHhcCCHHHHHHHHHHHHHHhhcCccEEEEEEcCCCHHHHHHHHHcCCeeeeee
Confidence 98889999999999999999999999988 8999999888 479999999999998764
|
| >3te4_A GH12636P, dopamine N acetyltransferase, isoform A; dopamine/acetyl COA, N-acetyltransferase domain; HET: ACO; 1.46A {Drosophila melanogaster} PDB: 3v8i_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.4e-13 Score=124.61 Aligned_cols=128 Identities=16% Similarity=0.163 Sum_probs=94.5
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC------CcCC--HHHH-Hhhc--CcEEEEE-ECCEEEEEEEEeeec-----
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL------VRRT--DEEL-LKAL--DSFYVVE-REGQIIACAALFPFF----- 338 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~------~~~~--~e~l-~~~~--~~~~V~~-~dg~iVG~~~l~~~~----- 338 (438)
+.+.||+++++|++++.+++...+..... .... ...+ ...+ ...+++. .+|+|||++......
T Consensus 5 ~~~~iR~a~~~D~~~i~~~~~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~~~~~~~~~~~ 84 (215)
T 3te4_A 5 SPYTIELIQPEDGEAVIAMLKTFFFKDEPLNTFLDLGECKELEKYSLKPLPDNCSYKAVNKKGEIIGVFLNGLMRRPSPD 84 (215)
T ss_dssp -CEEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTCCSCHHHHHHHHTTGGGSCCEEEEETTSCEEEEEEEEEEECCCTT
T ss_pred CcEEEEECCHHHHHHHHHHHHHhcCCCCCchhhcCCCCchHHHHHHHHHHhCCcEEEEEcCCCcEEEEEecccccCcchh
Confidence 45789999999999999998765421110 1111 1111 1122 3345554 579999998765421
Q ss_pred ------------------------------------CCC-eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 013702 339 ------------------------------------KEK-CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 381 (438)
Q Consensus 339 ------------------------------------~~~-~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l 381 (438)
..+ .++|..++|+|+|||||+|++|++++++++++.|+..+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~L~~~~~~~~~~~g~~~~~~ 164 (215)
T 3te4_A 85 DVPEKAADSCEHPKFKKILSLMDHVEEQFNIFDVYPDEELILDGKILSVDTNYRGLGIAGRLTERAYEYMRENGINVYHV 164 (215)
T ss_dssp CCCCCGGGGCCCHHHHHHHHHHHHHHHHCCHHHHCTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred hHHHHHHhhccCccHHHHHHHHHHHhhccCHHHhCCCCCeEEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEE
Confidence 112 8899999999999999999999999999999999999977
Q ss_pred Ec--HHHHHHHHHCCCeEeceecc
Q 013702 382 LT--TRTADWFKSRGFRECSIEMI 403 (438)
Q Consensus 382 ~t--~~a~~fY~k~GF~~~g~~~l 403 (438)
.+ ..+.+||+|+||+.++...+
T Consensus 165 ~~~~~~~~~~y~~~Gf~~~~~~~~ 188 (215)
T 3te4_A 165 LCSSHYSARVMEKLGFHEVFRMQF 188 (215)
T ss_dssp EESSHHHHHHHHHTTCEEEEEECG
T ss_pred EecCHHHHHHHHHCCCEEEEEEEh
Confidence 77 47899999999999986543
|
| >2kcw_A Uncharacterized acetyltransferase YJAB; GNAT fold, acyltransferase; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.8e-13 Score=115.98 Aligned_cols=119 Identities=18% Similarity=0.214 Sum_probs=89.1
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcC--cCCcCCHHHHHhhc------CcEEEEEEC-CEEEEEEEEeeecCCCeEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESG--ALVRRTDEELLKAL------DSFYVVERE-GQIIACAALFPFFKEKCGEVA 346 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~--~~~~~~~e~l~~~~------~~~~V~~~d-g~iVG~~~l~~~~~~~~~~I~ 346 (438)
|++.||+++++|++.+.+++....... +..+...+.+...+ ..++++..+ +++||++.+.+ .++.
T Consensus 1 M~~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~------~~i~ 74 (147)
T 2kcw_A 1 MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLSG------QHMD 74 (147)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHTTTTTSCCEEEEETTSCEEEEEEEET------TEEE
T ss_pred CeEEEecCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHhhCCCCcEEEEEcCCCCEEEEEEEec------ceec
Confidence 357899999999999999987754432 22222222222221 346788887 99999999872 4788
Q ss_pred EEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHHCCCeEeceecc
Q 013702 347 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMI 403 (438)
Q Consensus 347 ~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k~GF~~~g~~~l 403 (438)
.++|+|+|||+|+|++|++.++++++. ..+.+.. ..+.+||+|+||+..+....
T Consensus 75 ~~~v~p~~rg~Gig~~ll~~~~~~~~~---~~~~v~~~N~~a~~~y~k~Gf~~~~~~~~ 130 (147)
T 2kcw_A 75 ALFIDPDVRGCGVGRVLVEHALSMAPE---LTTNVNEQNEQAVGFYKKVGFKVTGRSEV 130 (147)
T ss_dssp EEEECHHHHTTTHHHHHHHHHHHHCTT---CEEEEETTCHHHHHHHHHHTEEEEEECSS
T ss_pred cEEECHHHhCCCHHHHHHHHHHHhccc---eEEEEecCChHHHHHHHHCCCEEeceeee
Confidence 999999999999999999999999842 3344443 58999999999999987643
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.5e-13 Score=131.84 Aligned_cols=123 Identities=16% Similarity=0.228 Sum_probs=96.3
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeee--cCCCeEEEEEEEE
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPF--FKEKCGEVAAIGV 350 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~--~~~~~~~I~~v~V 350 (438)
...+.||+++++|++.+.+++...... ...|....+...+ ..+++++.++++||++.+.+. .....+++ .++|
T Consensus 138 ~~~i~IR~a~~~D~~~i~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~g~iVG~~~~~~~~~~~~~~~~~-~l~V 214 (276)
T 3iwg_A 138 LEMIDMQIAGTEQLTAFVTFAAANIGA--PEQWLTQYYGNLIERKELFGYWHKGKLLAAGECRLFDQYQTEYADL-GMIV 214 (276)
T ss_dssp CCCCCCEECCGGGHHHHHHHHHHHHCC--CHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSCTTEEEE-EEEE
T ss_pred CCceEEEECCHHHHHHHHHHHHHhhcC--cHHHHHHHHHhhccCCeEEEEEECCEEEEEEEEEeccccCCcceEE-EEEE
Confidence 456789999999999999999877655 1122111122222 468899999999999997652 23345555 5999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+|+|||||||++|++.++++|++.|++.+. .+ ..+.+||+|+||+..+..
T Consensus 215 ~p~~RGkGiG~~Ll~~l~~~a~~~g~~~i~-~v~~~N~~A~~~YeklGF~~~~~l 268 (276)
T 3iwg_A 215 AQSNRGQGIAKKVLTFLTKHAATQGLTSIC-STESNNVAAQKAIAHAGFTSAHRI 268 (276)
T ss_dssp CGGGTTSSHHHHHHHHHHHHHHHTTCEEEE-EEETTCHHHHHHHHHTTEEEEEEE
T ss_pred CHHHcCCCHHHHHHHHHHHHHHHcCCCEEE-EEccCCHHHHHHHHHCCCEEeeEE
Confidence 999999999999999999999999999998 66 579999999999998743
|
| >3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.1e-13 Score=123.19 Aligned_cols=127 Identities=13% Similarity=0.072 Sum_probs=99.9
Q ss_pred CceeEEEECCcc-CHHHHHHHHHHHHH-cCcC---CcCCHHHHHhhc--------CcEEEEEE--CCEEEEEEEEeeec-
Q 013702 275 DLYEGTRTAKVT-DLSGIKQIIQPLVE-SGAL---VRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPFF- 338 (438)
Q Consensus 275 d~~~~IR~at~~-D~~~I~~L~~~~~~-~~~~---~~~~~e~l~~~~--------~~~~V~~~--dg~iVG~~~l~~~~- 338 (438)
...+.||+++.+ |.+.+.+++..... ..+. ...+.+++..++ ..+|++.. ++++||++.+....
T Consensus 36 ~~~l~lr~~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~~ 115 (209)
T 3pzj_A 36 GEAVSLQPLDAPRHGAALFRLFAGDDSHWEHLPYGPFEDEDAFITWLALTVAQSDTALYVVCAKDSDQALGFLGYRQMVQ 115 (209)
T ss_dssp CSSEEEEECCHHHHHHHHHHHHHTCGGGGTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEEEEETTCCCCCEEEEEEEEEG
T ss_pred CCeEEEEECCcccCHHHHHHHHcCCHHHHhhCCCCCCCCHHHHHHHHHHHhcCCCcEEEEEEECCCCcEEEEEEeeeecC
Confidence 345789999999 99999998874311 1111 223555554443 23566664 79999999997543
Q ss_pred CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 339 KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 339 ~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
....++|+.++|+|+|||||||++|++.+++++.+.|++++.+.+ .++++||+|+||+..+..
T Consensus 116 ~~~~~ei~~~~v~~~~~g~Gig~~ll~~l~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~ 182 (209)
T 3pzj_A 116 AHGAIEIGHVNFSPALRRTRLATEAVFLLLKTAFELGYRRCEWRCDSRNAASAAAARRFGFQFEGTL 182 (209)
T ss_dssp GGTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred cCCeEEEEEEEECHHHhcCCHHHHHHHHHHHHHHHcCCcEEEEeecCCCHHHHHHHHHCCCEEeeee
Confidence 357899988889999999999999999999999999999999988 579999999999998854
|
| >2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 | Back alignment and structure |
|---|
Probab=99.47 E-value=9.3e-14 Score=145.51 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=92.8
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeee----CHHHHH-HHhcCCceEEEcC-cccCC-CCC
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV----DVTRMR-ERLDGGCLVILSN-LGYSS-SGE 95 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v----~~~~i~-~ll~~g~IPVi~~-i~~~~-~g~ 95 (438)
.|+++|.+ |+++++.|.++++....+ .++|..+ ..+.|. .|++.|.|||+++ +|.++ +|.
T Consensus 158 ~L~~~Gi~----A~~l~~~~~~l~t~~~~~---------~~~i~~~~~~~~~~~l~~~Ll~~g~IpVv~Gf~g~~~~~g~ 224 (510)
T 2cdq_A 158 YLNTIGVK----ARQYDAFEIGFITTDDFT---------NGDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGA 224 (510)
T ss_dssp HHHHTTCC----EEEECGGGTTCEECSCST---------TCCBCTTHHHHHHHHHHHHHHHSCCEEEEESSEEEETTTCC
T ss_pred HHHHCCCC----EEEEEhhHeeEEEecCCC---------ccchhhHHHHHHHHHHHHHHHhCCcEEEEeCccccCCCCCc
Confidence 78888886 999999999999866432 1344333 234454 4789999999998 58888 999
Q ss_pred eeecC---hHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhh
Q 013702 96 VLNCN---TYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQR 148 (438)
Q Consensus 96 ~~nin---aD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g 148 (438)
+.+++ +|++|+.+|.+|+||.++++|||+|++ +++++|++++++|+.++...|
T Consensus 225 ittlgrGgsD~tAa~lA~~l~Ad~l~i~TDVdGVytaDPr~v~~A~~I~~Is~~E~~ela~~G 287 (510)
T 2cdq_A 225 VTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFG 287 (510)
T ss_dssp EEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHHHHH
T ss_pred eEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCcCCCCCCCCCCCEEecEeCHHHHHHHHhcC
Confidence 99998 999999999999999999999999883 358999999999999986544
|
| >2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=5.5e-13 Score=117.60 Aligned_cols=125 Identities=12% Similarity=0.042 Sum_probs=95.4
Q ss_pred ceeEEEECCccCHHHHHHH-HHHHHHcCc----CCcCCHHHHHhhc-----------CcEEEEEE--CCEEEEEEEEeee
Q 013702 276 LYEGTRTAKVTDLSGIKQI-IQPLVESGA----LVRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPF 337 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L-~~~~~~~~~----~~~~~~e~l~~~~-----------~~~~V~~~--dg~iVG~~~l~~~ 337 (438)
..+.||+++++|.+.+.++ +.......+ ..+.+.++...++ ...+++.. ++++||++.+...
T Consensus 13 ~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~vG~~~~~~~ 92 (181)
T 2fck_A 13 QRLQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEF 92 (181)
T ss_dssp SSEEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEE
T ss_pred CcEEEEECchhhHHHHHHHHhCCHhHhcccCcCCCCCCHHHHHHHHHHHHHhhhcCCcEEEEEEECCCCcEEEEEEEEEe
Confidence 3468999999999999999 554322111 1233444443332 34566665 8999999999754
Q ss_pred c-CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 338 F-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 338 ~-~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
. ....+++ .++|+|+|||+|+|++|++.+++++++ .|++.+.+.+ .++.+||+|+||+..+..
T Consensus 93 ~~~~~~~~i-~~~v~~~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~ 161 (181)
T 2fck_A 93 YHTFNMASL-GYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLA 161 (181)
T ss_dssp EGGGTEEEE-EEEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred cccCCeEEE-EEEEChhhcCCChHHHHHHHHHHHHHHhcCceEEEEEEccCCHHHHHHHHHcCCEEEEEE
Confidence 3 3467788 689999999999999999999999988 4999999888 579999999999998764
|
| >2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-13 Score=118.39 Aligned_cols=111 Identities=16% Similarity=0.104 Sum_probs=95.2
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHH--hhcCcEEEEEECCEEEEEEEEeeec--CCCeEEEEEEEECcc
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL--KALDSFYVVEREGQIIACAALFPFF--KEKCGEVAAIGVSPE 353 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~--~~~~~~~V~~~dg~iVG~~~l~~~~--~~~~~~I~~v~V~p~ 353 (438)
+.||+++++|++.+.+|+.. +. .+.+.+. ...+.+||++.+|++|||+.+++.. +...++|.+++
T Consensus 1 m~IR~a~~~D~~~l~~L~~~---~~----~~~~~L~~~~~~~~~fVAe~~g~ivG~v~l~~~i~gdg~~~~L~dl~---- 69 (141)
T 2d4p_A 1 MRFRPFTEEDLDRLNRLAGK---RP----VSLGALRFFARTGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRIE---- 69 (141)
T ss_dssp CEEECCCGGGHHHHHHTSTT---SC----CCHHHHHHHHHHSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEEE----
T ss_pred CeEEECCHHHHHHHHHHHcc---Cc----chHHHHHhcCCCCeEEEEEECCEEEEEEeeeeEEEcCCeEEEEeHHh----
Confidence 47999999999999999764 11 5555655 6668899999999999999887643 44678898888
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEec
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 399 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g 399 (438)
||++|||+.|+++++++|++.|+.++.+.+ ..+++||+++||+...
T Consensus 70 ~R~~GIG~~Ll~~a~~~a~~~G~~rv~L~~~~~N~~a~~fye~~Gf~~~~ 119 (141)
T 2d4p_A 70 GRSVEALRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFALGP 119 (141)
T ss_dssp ESSHHHHHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCCCS
T ss_pred hccccHHHHHHHHHHHHHHHCCCCEEEEEecccCHHHHHHHHHCCCEecC
Confidence 999999999999999999999999999988 5799999999999865
|
| >1ygh_A ADA4, protein (transcriptional activator GCN5); transcriptional regulation, histone acetylation; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-12 Score=115.28 Aligned_cols=145 Identities=11% Similarity=0.154 Sum_probs=100.3
Q ss_pred eEEEECCccCHHHHHHHHHH---HHHcCcCCcCCHHHHHhhc----Cc-EEEEEECCEEEEEEEEeeecCCCeEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQP---LVESGALVRRTDEELLKAL----DS-FYVVEREGQIIACAALFPFFKEKCGEVAAIG 349 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~---~~~~~~~~~~~~e~l~~~~----~~-~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~ 349 (438)
++||+++.+|.+....++.. .+...+ ...+.+.+...+ .. ++++..++++||++.+.+.......++..++
T Consensus 2 i~~r~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~i~~l~ 80 (164)
T 1ygh_A 2 IEFRVVNNDNTKENMMVLTGLKNIFQKQL-PKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCA 80 (164)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEE
T ss_pred eeEEEecCCCchhhHHHHHHHHHHHHhhc-ccCCHHHHHHHhhCCCceEEEEECCCCEEEEEEEEEEcCCCCceEEEEEE
Confidence 57899988887766665433 233322 223444443322 22 3667778999999999876555678899999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc-HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccC
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 425 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll 425 (438)
|+|+|||+|+|++|++.+++++++ .|++.+.+.. +.+.+||+|+||+..+.. +...+..|..+-.+.++|.+-+
T Consensus 81 V~p~~rg~Gig~~ll~~~~~~a~~~~g~~~l~v~~~n~a~~~y~k~GF~~~~~~--~~~~~~~~~~~~~~~~~m~~~l 156 (164)
T 1ygh_A 81 ISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKEITL--DKSIWMGYIKDYEGGTLMQCSM 156 (164)
T ss_dssp ECTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSSCCS--CHHHHBTTBCCTTCCEEEEEEC
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEecCChHHHHHHHcCCEeccee--ccceEEEEEEEecCeEEEEeec
Confidence 999999999999999999999998 9998554443 578999999999987654 3333333322333455565543
|
| >2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=3.7e-14 Score=146.66 Aligned_cols=110 Identities=21% Similarity=0.233 Sum_probs=88.1
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeC-----HHHHHHHhcCCceEEEc-CcccCCCCCe
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-----VTRMRERLDGGCLVILS-NLGYSSSGEV 96 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~-----~~~i~~ll~~g~IPVi~-~i~~~~~g~~ 96 (438)
.|+++|.+ |+++++.+. +++... |+. +++..++ .+.++.|++.+ |||++ +++.+++|++
T Consensus 129 ~L~~~Gi~----a~~l~~~~~-l~t~~~--------~~~-~~~~~~~~~~~~~~~l~~l~~~~-IpVv~Gf~g~~~~g~~ 193 (449)
T 2j0w_A 129 ILRERDVQ----AQWFDVRKV-MRTNDR--------FGR-AEPDIAALAELAALQLLPRLNEG-LVITQGFIGSENKGRT 193 (449)
T ss_dssp HHHTTSCC----EEECCGGGT-CBBCSC--------TTS-CCBCHHHHHHHHHHHTHHHHHHS-EEEEESSEEECTTSCE
T ss_pred HHHHCCCc----EEEEchHHh-eeecCC--------CCC-ccccHhHhHHHHHHHHHHHhcCC-EEEEeCCeeeCCCCCE
Confidence 77888876 999999999 666332 332 4443332 34666777655 99998 5698999999
Q ss_pred eecC---hHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHh
Q 013702 97 LNCN---TYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQ 147 (438)
Q Consensus 97 ~nin---aD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~ 147 (438)
++++ +|++|+.+|.+|+||+|+++|||+|+ | +++++|++++++|+.++...
T Consensus 194 ttl~rGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~DPr~~~~a~~i~~is~~e~~ela~~ 254 (449)
T 2j0w_A 194 TTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATF 254 (449)
T ss_dssp EECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHHHHHHHHT
T ss_pred EEeCCCChHHHHHHHHHHCCCCEEEEccccCCcCcCCCCCCCCCEEccCccHHHHHHHHhc
Confidence 9998 99999999999999999999999988 3 35899999999999998643
|
| >2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-12 Score=117.96 Aligned_cols=124 Identities=8% Similarity=-0.031 Sum_probs=95.1
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC---CcCCH-HHHHhhc--------CcEEEEEECCEEEEEEEEeeec-CCCe
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL---VRRTD-EELLKAL--------DSFYVVEREGQIIACAALFPFF-KEKC 342 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~---~~~~~-e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~~-~~~~ 342 (438)
..+.||+++++|++.+.++ .......+. .+.+. +....++ ..+|++..++++||++.+.... ....
T Consensus 11 ~~~~ir~~~~~D~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~vG~~~~~~~~~~~~~ 89 (194)
T 2z10_A 11 RHVRLEPLALAHLPAFLRH-YDPEVYRFLSRAPVAPTEEALRAHLEGLLGEPGRVNWAILFGKEVAGRISVIAPEPEHAK 89 (194)
T ss_dssp SSEEEEECCGGGHHHHHHT-CCHHHHTTSTTCCSSSSHHHHHHHHHHHHHSTTCEEEEEEETTEEEEEEEEEEEEGGGTE
T ss_pred CeEEEeeCCHHHHHHHHHh-cCHHHHHhcCCCCCCChHHHHHHHHHHhhcCCCceEEEEecCCCEEEEEEecccCcccCE
Confidence 3468999999999999999 543332221 12232 3333322 2457778899999999987543 3468
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+++..+++ |+|||+|||++|++.+++++.+. |++.+.+.+ ..+++||+|+||+..+..
T Consensus 90 ~~i~~~~~-p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 152 (194)
T 2z10_A 90 LELGTMLF-KPFWGSPANKEAKYLLLRHAFEVLRAERVQFKVDLRNERSQRALEALGAVREGVL 152 (194)
T ss_dssp EEEEEEEC-GGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred EEEeeEEC-HhHhCCcHHHHHHHHHHHHHHhhCCceEEEEEecCCCHHHHHHHHHcCCcEEEec
Confidence 88977667 99999999999999999999886 999999888 579999999999998864
|
| >1m4i_A Aminoglycoside 2'-N-acetyltransferase; COA binding motif; HET: COA KAN PAP; 1.50A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1m4d_A* 1m4g_A* 1m44_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=5.8e-13 Score=118.57 Aligned_cols=118 Identities=25% Similarity=0.335 Sum_probs=92.8
Q ss_pred eEEEECCccCH-----HHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeec---CC---CeEE
Q 013702 278 EGTRTAKVTDL-----SGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFF---KE---KCGE 344 (438)
Q Consensus 278 ~~IR~at~~D~-----~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~---~~---~~~~ 344 (438)
+.||+++.+|+ +.+.+++...+.. ..+.+.+...+ ..+++ +.++++||++.+.... .. ..++
T Consensus 6 ~~ir~~~~~D~~~~~~~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~v-~~~~~~vG~~~~~~~~~~~~~~~~~~~~ 80 (181)
T 1m4i_A 6 HTARLVHTADLDSETRQDIRQMVTGAFAG----DFTETDWEHTLGGMHALI-WHHGAIIAHAAVIQRRLIYRGNALRCGY 80 (181)
T ss_dssp TCCEEEEGGGCCHHHHHHHHHHHHHHTTT----CCCHHHHHHTCSSEEEEE-EETTEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred eEEEECChHHcchhHHHHHHHHHHHHccc----ccCHHHHHhhcCCcEEEE-EECCEEEEEEEEEEeccccCCCCcceeE
Confidence 57999999999 9998887764422 33456666555 34667 8899999999987543 22 5678
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
|..++|+|+|||||+|++|++++++++++ ++....... ..+.+||+|+||+..+..
T Consensus 81 i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~~~l~~~~~n~~a~~~y~k~GF~~~~~~ 137 (181)
T 1m4i_A 81 VEGVAVRADWRGQRLVSALLDAVEQVMRG-AYQLGALSSSARARRLYASRGWLPWHGP 137 (181)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHH-HCSEEEEECCTTTHHHHHHTTCEECCSC
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHh-CcEEEEecCCHHHHHHHHhcCCEEcCCc
Confidence 99999999999999999999999999988 555444444 579999999999998753
|
| >1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.45 E-value=4.5e-13 Score=124.22 Aligned_cols=127 Identities=13% Similarity=-0.021 Sum_probs=94.5
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHH-cCcCCcCCHHHHHhhc--------CcEEEEEECCEEEEEEEEeeecC-------
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFK------- 339 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~-~~~~~~~~~e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~~~------- 339 (438)
..+.||+++.+|++.|.+++..... ..+..+++.++...++ ..++++..++++||++.+.....
T Consensus 41 ~~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~iG~~~l~~~~~~~~~~~~ 120 (210)
T 1yk3_A 41 PPYGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYY 120 (210)
T ss_dssp TTEEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSS
T ss_pred CcEEEEECCHHHHHHHHHHHcChHHHHHhCCCCCHHHHHHHHHHhhcCCcceEEEEEECCEEEEEEEEEccccccccccc
Confidence 4468999999999999999865331 1112344555544332 23577788999999999874211
Q ss_pred ---CCeEEEEEEEEC-ccccCCcHHHHHHHHHHHHHHH--CCCCEEEEEc----HHHHHHHHHCCCeEeceecc
Q 013702 340 ---EKCGEVAAIGVS-PECRGQGQGDKLLDYIEKKAAS--LGLDMLFLLT----TRTADWFKSRGFRECSIEMI 403 (438)
Q Consensus 340 ---~~~~~I~~v~V~-p~yRgqGiG~~Ll~~l~~~a~~--~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~l 403 (438)
.....+ .++|. |+|||||||++|++.+++++.+ .|+.+|.+.+ ..|++||+|+||+..+....
T Consensus 121 ~~~~~~~g~-~~~i~~p~~rGkGiG~~ll~~~~~~a~~~~~g~~~I~l~v~~~N~~A~~lyek~GF~~~g~~~~ 193 (210)
T 1yk3_A 121 DADPYDLGL-HAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDT 193 (210)
T ss_dssp CCCTTCEEE-EEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEEEEC
T ss_pred CCCCCceEE-EEEEEChhhcCCChHHHHHHHHHHHHHhcCCCCCEEEEecCccCHHHHHHHHHcCCEEeEEEeC
Confidence 112223 45665 9999999999999999999986 7999999988 58999999999999987644
|
| >2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.43 E-value=9e-13 Score=119.05 Aligned_cols=129 Identities=14% Similarity=0.054 Sum_probs=95.3
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHH-cCcCCcCCHHHHHhhc--------CcEEEEEECCEEEEEEEEeeec--------
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVE-SGALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF-------- 338 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~-~~~~~~~~~e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~~-------- 338 (438)
..+.||+++++|++.+.+++..... ..+....+.++...++ ..++++..++++||++.+....
T Consensus 20 ~~~~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~~ 99 (198)
T 2qml_A 20 KKLSFRHVTMDDVDMLHSWMHEEHVIPYWKLNIPLVDYKKHLQTFLNDDHQTLMVGAINGVPMSYWESYWVKEDIIANYY 99 (198)
T ss_dssp EEEEEEECCGGGHHHHHHHTTSTTTHHHHCCCCCHHHHHHHHHHHHTCTTEEEEEEEETTEEEEEEEEEEGGGSGGGGGS
T ss_pred CcEEEEECCHHHHHHHHHHHcCcchhhhccCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecccccccccc
Confidence 4578999999999999999754221 1011112444443332 1457788899999999997543
Q ss_pred CCCeEEEE-EEEEC-ccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEeceeccc
Q 013702 339 KEKCGEVA-AIGVS-PECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 339 ~~~~~~I~-~v~V~-p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp 404 (438)
....+++. .++|. |+|||||||++|++.+++++.+ .|+..+.+.+ ..+++||+|+||+..+....+
T Consensus 100 ~~~~~~~~~~~~v~~p~~rg~Gig~~ll~~~~~~a~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~ 172 (198)
T 2qml_A 100 PFEEHDQGIHLLIGPQEYLGQGLIYPLLLAIMQQKFQEPDTNTIVAEPDRRNKKMIHVFKKCGFQPVKEVELP 172 (198)
T ss_dssp CCCTTCEEEEEEECSGGGSSSSTHHHHHHHHHHHHHTSTTCCEEEECCBTTCHHHHHHHHHTTCEEEEEEECS
T ss_pred cCCCccEEEEEEEeCHHHcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHCCCEEEEEEecC
Confidence 23334443 47888 6999999999999999999976 5999999988 479999999999999876543
|
| >2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-12 Score=119.61 Aligned_cols=124 Identities=11% Similarity=0.015 Sum_probs=92.0
Q ss_pred eeEEEECCccCHHHHHHHHHHH----HHcCcCCcC----C---H-HHHHhhc-----------CcEEEEEECCEEEEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPL----VESGALVRR----T---D-EELLKAL-----------DSFYVVEREGQIIACAA 333 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~----~~~~~~~~~----~---~-e~l~~~~-----------~~~~V~~~dg~iVG~~~ 333 (438)
.+.||+++.+|++.+.+++... ....+..++ + . +.+...+ ..++++..++++||++.
T Consensus 16 ~l~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~ 95 (218)
T 2vzy_A 16 RLQLQLPTEELCDQLIDTILEGVHDPDRMPFSVPWTRASREDLPFNTLSHLWQQLAGFKRDDWSLPLAVLVDGRAVGVQA 95 (218)
T ss_dssp SEEEECCCHHHHHHHHHHHHC-------------------CCHHHHHHHHHHHHHHTCBTTEEEEEEEEEETTEEEEEEE
T ss_pred CEEEecCCHHHHHHHHHHHhhcccCccccccccCcCCcCchHHHHHHHHHHHHhhcccCcCCceEEEEEEECCEEEEEEE
Confidence 4689999999999999998631 111111011 1 1 1111111 13567788999999999
Q ss_pred Eeeec--CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 334 LFPFF--KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 334 l~~~~--~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+.... ....+++ .++|+|+|||||||++|++.+++++.+ .|++.+.+.+ .++++||+|+||+..+..
T Consensus 96 ~~~~~~~~~~~~ei-g~~v~~~~rgkGig~~ll~~l~~~a~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~ 169 (218)
T 2vzy_A 96 LSSKDFPITRQVDS-GSWLGLRYQGHGYGTEMRAAVLYFAFAELEAQVATSRSFVDNPASIAVSRRNGYRDNGLD 169 (218)
T ss_dssp EEEESHHHHCEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EeccccCCCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhhCCceEEEEEeccCCHHHHHHHHHCCCEEeeee
Confidence 98654 2467888 579999999999999999999999987 7999999888 579999999999998864
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.4e-12 Score=125.13 Aligned_cols=125 Identities=14% Similarity=0.010 Sum_probs=101.8
Q ss_pred eeEEEECCccC-HHHHHHHHHHHHHcCcC-CcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecCCCeEEEEE
Q 013702 277 YEGTRTAKVTD-LSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAA 347 (438)
Q Consensus 277 ~~~IR~at~~D-~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~ 347 (438)
.+.||+++.+| ++.+.+++...+...+. .+.+.+.+...+ ..+++++.++++||++.+........++|..
T Consensus 172 ~~~ir~~~~~dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~i~~ 251 (330)
T 3tt2_A 172 GITARTFVPGLDERATYEAVEEAFGDIWGRPPSTFERWLSMTQSERKDPELWLLAVETDSGHIVGTCLGQETAGKGWIGS 251 (330)
T ss_dssp TEEEEECCTTTSHHHHHHHHHHHTC----CCCCCHHHHHHHHTTGGGCGGGEEEEEETTTTEEEEEEEEEEETTEEEEEE
T ss_pred CeEEEecCcccchHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhCCCCCccEEEEEEECCEEEEEEEEecCCCCCcEEEEE
Confidence 46899999999 99999998877654332 345566555322 3588899999999999998644567899999
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-----HHHHHHHHHCCCeEecee
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-----~~a~~fY~k~GF~~~g~~ 401 (438)
++|+|+|||+|+|++|+..+++++++.|++.+.+.+ +.+.+||+|+||+..+..
T Consensus 252 ~~v~p~~rg~G~g~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~~a~~~y~~~GF~~~~~~ 310 (330)
T 3tt2_A 252 VGVRRPWRGRGIALALLQEVFGVYYRRGVREVELSVDAESRTGAPRLYRRAGMHVKHRY 310 (330)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEEEETTTCSCHHHHHTTCEEEEEE
T ss_pred eeECHHHhhcCHHHHHHHHHHHHHHHcCCCeEEEEEecCCChhHHHHHHHcCCEEeEEE
Confidence 999999999999999999999999999999998865 358999999999998654
|
| >2k5t_A Uncharacterized protein YHHK; N-acetyl transferase, COA, bound ligand, coenzyme A, structural genomics, PSI-2, protein structure initiative; HET: COA; NMR {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.1e-13 Score=113.53 Aligned_cols=109 Identities=12% Similarity=0.172 Sum_probs=78.9
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcH
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 359 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGi 359 (438)
+++++.+|++++.+++... ....+ ....-..+++++.++++|||+.+... ...++|..++|+|+|||+|+
T Consensus 8 i~~~~~~d~~~l~~l~~~~----~~~~~----~~~~~~~~~va~~~~~ivG~~~~~~~--~~~~~i~~l~V~p~~rg~Gi 77 (128)
T 2k5t_A 8 LEKFSDQDRIDLQKIWPEY----SPSSL----QVDDNHRIYAARFNERLLAAVRVTLS--GTEGALDSLRVREVTRRRGV 77 (128)
T ss_dssp CSSCCHHHHHHHHHHCTTS----CCCCC----CCCSSEEEEEEEETTEEEEEEEEEEE--TTEEEEEEEEECTTCSSSSH
T ss_pred ehhCCHHHHHHHHHHcccC----CHHHh----EECCCccEEEEEECCeEEEEEEEEEc--CCcEEEEEEEECHHHcCCCH
Confidence 3446677777777664321 11111 11112346788889999999998743 35699999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHHCCCeEece
Q 013702 360 GDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSI 400 (438)
Q Consensus 360 G~~Ll~~l~~~a~~~g~~~l~l~t------~~a~~fY~k~GF~~~g~ 400 (438)
|++||+++++++++ +..+.+.+ ..+.+||+|+||+..+.
T Consensus 78 G~~Ll~~~~~~~~~--~~~~~l~~~~~~~~~~a~~fY~~~GF~~~~~ 122 (128)
T 2k5t_A 78 GQYLLEEVLRNNPG--VSCWWMADAGVEDRGVMTAFMQALGFTTQQG 122 (128)
T ss_dssp HHHHHHHHHHHSCS--CCEEEECCTTCSTHHHHHHHHHHHTCEECSS
T ss_pred HHHHHHHHHHHhhh--CCEEEEeccCccccHHHHHHHHHcCCCcccc
Confidence 99999999999854 55555533 25789999999998765
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=6.4e-12 Score=123.02 Aligned_cols=124 Identities=16% Similarity=0.137 Sum_probs=97.9
Q ss_pred eeEEEECCccCHHHHH---HHHHHHHHcCcC-CcCCHHHHHhhc--------CcEEEEEECCEEEEEEEEeeecCCCeEE
Q 013702 277 YEGTRTAKVTDLSGIK---QIIQPLVESGAL-VRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFFKEKCGE 344 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~---~L~~~~~~~~~~-~~~~~e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~~~~~~~~ 344 (438)
.+.||+++++|.+.+. +++......... .+.+.+.+..++ ..+++++.++++||++.+........++
T Consensus 7 ~~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~~~ 86 (339)
T 2wpx_A 7 ELEFVPLAANDDETVGQWLDLMALAAETGPRAAPPCNVDMVGSLRFAPPATALDDWVVRSGGRVVGALRLALPDGAPTAR 86 (339)
T ss_dssp SCEEEECCTTCHHHHHHHHHHHHHHHHSSSSCCCCCHHHHHHHHHCCCTTEEEEEEEEEETTEEEEEEEEEEETTCSEEE
T ss_pred ceEEEECCccCHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHhhccCCCcceeEEEEEECCEEEEEEEEEecCCCCeEE
Confidence 3679999999966554 444444433222 122666665544 2468888999999999998654567899
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----H-------HHHHHHHHCCCeEece
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----T-------RTADWFKSRGFRECSI 400 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~-------~a~~fY~k~GF~~~g~ 400 (438)
|..++|+|+|||+|||++|++.+++++++.|++.+.+.+ . .+.+||+|+||+..+.
T Consensus 87 i~~~~v~p~~r~~Gig~~Ll~~~~~~~~~~g~~~i~~~~~~~n~~g~~~~~~~~~~~~~~Gf~~~~~ 153 (339)
T 2wpx_A 87 VDQLLVHPGRRRRGIGRALWAHARELARKHDRTTLTATVVESLPSGPAQDPGPAAFAAAMGAHRSDI 153 (339)
T ss_dssp EEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEEEEECCSSSCCCCCHHHHHHHHTTCEECSS
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEeecCCCCcccccchHHHHHHHCCCeeeee
Confidence 999999999999999999999999999999999999887 3 7999999999998874
|
| >2g0b_A FEEM; N-acyl transferase, environmental DNA, protein-product compl antibiotic synthase, transferase; HET: NLT; 3.00A {Uncultured bacterium} | Back alignment and structure |
|---|
Probab=99.40 E-value=4.4e-12 Score=117.18 Aligned_cols=143 Identities=10% Similarity=0.112 Sum_probs=108.7
Q ss_pred eeEEEECCccC-HHHHHHHHHHHHH-cCcCCcCCHHHHH-hhcCcEEEEEECCEEEEEEEEeeecC--------------
Q 013702 277 YEGTRTAKVTD-LSGIKQIIQPLVE-SGALVRRTDEELL-KALDSFYVVEREGQIIACAALFPFFK-------------- 339 (438)
Q Consensus 277 ~~~IR~at~~D-~~~I~~L~~~~~~-~~~~~~~~~e~l~-~~~~~~~V~~~dg~iVG~~~l~~~~~-------------- 339 (438)
...+|.++.+| .+++.+|....+- .++..+.....+. .....+++++.++++|||+.+.....
T Consensus 6 ~~~ir~a~~~~~~~~i~~Lr~~~y~e~~~~~~~~~~~~~~~~~~~~~~a~~~g~ivG~~~l~~~~~~~lp~~~~~~~e~~ 85 (198)
T 2g0b_A 6 RKVARILVAPNERDAARRIVRTTYEAQGYAIDESFATFLEGPSATTFGLFNGEVLYGTISIINDGAQGLPMDSIYAVELA 85 (198)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHTSTTEEEEEEEETTEEEEEEEEEECBTTBCTTHHHHHHHHH
T ss_pred ceeEEEeCCHHHHHHHHHHHHHHHHHhccCcccccchhhcCCCcEEEEEEECCEEEEEEEEEeCCCcCCchhhhchhhhh
Confidence 34689998766 9999999988665 3443331222222 23345788889999999999985322
Q ss_pred ------CCeEEEEEEEECccc--------cCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceeccc
Q 013702 340 ------EKCGEVAAIGVSPEC--------RGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 340 ------~~~~~I~~v~V~p~y--------RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp 404 (438)
...++|..++|+|+| ||+|+|+.|++.++++|++.|++.+++.+ ..+++||+++||+.++...
T Consensus 86 ~~~~~~~~~~EI~RLaV~~~~~~~~~~~~rg~gig~~L~~~a~~~a~~~g~~~i~levn~ra~~FY~k~GF~~~g~~~-- 163 (198)
T 2g0b_A 86 AWRGEGKKLAEVVQFAMDHTLYEAVAGAKPSPFEAASLFTMVLTYALETHIDYLCISINPKHDTFYSLLGFTQIGALK-- 163 (198)
T ss_dssp HHHHTTCCEEEEEEEEECTTSSCCCC----CGGGCHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEEE--
T ss_pred hhhhcCCcEEEEEEEEEchHHhhcccccccCChHHHHHHHHHHHHHHHcCCCEEEEEeCHHHHHHHHHCCCEEeeCCc--
Confidence 259999999999999 99999999999999999999999999977 6789999999999998763
Q ss_pred hHhhhhhcCCCCceEEEEccCC
Q 013702 405 EERRKRINLSRNSKYYMKKLLP 426 (438)
Q Consensus 405 ~~~~~~y~~~r~s~~~~k~ll~ 426 (438)
.|...+.+.+.|..-++
T Consensus 164 -----fy~~~g~p~~lm~~~~~ 180 (198)
T 2g0b_A 164 -----HYGTVNAPAIARALYVP 180 (198)
T ss_dssp -----EETTTTEEEEEEEEEGG
T ss_pred -----cCCCCCcceEeeecCHH
Confidence 22234566777765544
|
| >3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus, brucellosis, acyl CO-A, arylami transferase; 1.75A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} | Back alignment and structure |
|---|
Probab=99.40 E-value=6.7e-12 Score=119.09 Aligned_cols=127 Identities=15% Similarity=0.024 Sum_probs=99.5
Q ss_pred CceeEEEECCc-cCHHHHHHHHH---HHHHcCcC---CcCCHHHHHhhc--------CcEEEEEE--CCEEEEEEEEeee
Q 013702 275 DLYEGTRTAKV-TDLSGIKQIIQ---PLVESGAL---VRRTDEELLKAL--------DSFYVVER--EGQIIACAALFPF 337 (438)
Q Consensus 275 d~~~~IR~at~-~D~~~I~~L~~---~~~~~~~~---~~~~~e~l~~~~--------~~~~V~~~--dg~iVG~~~l~~~ 337 (438)
...+.||++++ +|++.+.+++. ......+. ...+.++...++ ..+|++.. ++++||++.+...
T Consensus 41 ~~~l~LR~~~~e~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~~g~~IG~~~l~~~ 120 (246)
T 3tcv_A 41 GRYVRLEPLNAQKHGDELFAASSVEDAEQRFTWLFETPPATRAEFEPWLDKASKSDDPLFFAVIDKASGKVAGRQALMRI 120 (246)
T ss_dssp CSSEEEEECCHHHHHHHHHHHHTSTTHHHHHTTSSSCCCSSHHHHHHHHHHHHHCSSSEEEEEEETTTCSEEEEEEEEEE
T ss_pred CCcEEEEECCchhhHHHHHHHhcCCCCHHHHhccCCCCCCCHHHHHHHHHHHhcCCCceEEEEEECCCCCEEEEEEEeec
Confidence 34578999999 79999999986 33222222 234556655544 23555554 7999999999754
Q ss_pred c-CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 338 F-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 338 ~-~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
. ....++|..++|+|+|||+|||+++++.++++|.+ .|+.++.+.+ .++++||+|+||+..+..
T Consensus 121 ~~~~~~~eig~~~v~p~~rgkGig~~ll~~ll~~a~~~~g~~~i~l~v~~~N~~s~~lyek~GF~~~G~~ 190 (246)
T 3tcv_A 121 DPANGVIEIGSIYWGPLISRRPAATEAQFLFMQYVFDVLGYRRYEWECHNENGPSRRAAERFGFRFEGIF 190 (246)
T ss_dssp ETTTTEEEEEEEEECTTTTTSHHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred ccccCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHhcCcEEEEEEccCCCHHHHHHHHHCCCEEEEEE
Confidence 3 45789998888999999999999999999999977 6999999988 579999999999998854
|
| >4fd7_A Putative arylalkylamine N-acetyltransferase 7; GNAT, COA binding; 1.80A {Aedes aegypti} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-12 Score=121.29 Aligned_cols=129 Identities=12% Similarity=0.080 Sum_probs=94.6
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc------C---CcCCHHHHHhhc------CcEEEEEE--CCEEEEEEEEeeecC
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA------L---VRRTDEELLKAL------DSFYVVER--EGQIIACAALFPFFK 339 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~------~---~~~~~e~l~~~~------~~~~V~~~--dg~iVG~~~l~~~~~ 339 (438)
.+.||+++++|++++.+++...+.... . .+.+.+.+...+ ...+|+.+ +|+|||++...+...
T Consensus 30 ~~~IR~~~~~D~~~i~~~l~~~f~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~IVG~a~~~~~~~ 109 (238)
T 4fd7_A 30 WYRVQDLPEDRFEDAIRHMCDYFARDELMNQAKGLAKDLVAMGDVVALWKAMLPDRMSLVCFREGSDEIVGVNILDVASR 109 (238)
T ss_dssp EEEEEECCGGGHHHHHHHHHHTHHHHSHHHHHHTGGGCHHHHHHHHHHHHHHGGGSCCEEEEETTCCSEEEEEEEEEEET
T ss_pred eEEEEECCHHHHHHHHHHHHhhccCcChhhHHhCCCCChhhHHHHHHHHHHHHhCCcEEEEEECCCCcEEEEEEecccCc
Confidence 578999999999999999876431111 0 111223222221 34567765 469999998875432
Q ss_pred -----------------------------------CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-
Q 013702 340 -----------------------------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT- 383 (438)
Q Consensus 340 -----------------------------------~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t- 383 (438)
....++..++|+|+|||+|||++|++.++++|++.|++.+.+.+
T Consensus 110 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~p~~rg~Gig~~L~~~~~~~~~~~g~~~~~~~~~ 189 (238)
T 4fd7_A 110 SDKDNAQFNSAIFQAIYDTIEYVSHQANIFDRYNVDHYLNAMGLSVDPKYRGRGIATEILRARIPLCRAVGLKLSATCFT 189 (238)
T ss_dssp TCCCCCCCSCHHHHHHHHHHHHHHHHHTHHHHHTCSEEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHHHTCCEEEEEEC
T ss_pred ccccccccCCHHHHHHHHHHHHHHhhCcHHHhcCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence 23456778999999999999999999999999999999776544
Q ss_pred -HHHHHHHHHCCCeEeceeccch
Q 013702 384 -TRTADWFKSRGFRECSIEMIPE 405 (438)
Q Consensus 384 -~~a~~fY~k~GF~~~g~~~lp~ 405 (438)
..+.+||+|+||+..+......
T Consensus 190 n~~a~~~y~k~GF~~~~~~~~~~ 212 (238)
T 4fd7_A 190 GPNSQTAATRVGFQEDFTITYGE 212 (238)
T ss_dssp SHHHHHHHHHHTCEEEEEEEHHH
T ss_pred CHHHHHHHHHCCCEEEEEEEehh
Confidence 5799999999999998655443
|
| >2gan_A 182AA long hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.10A {Pyrococcus horikoshii} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.6e-12 Score=117.17 Aligned_cols=124 Identities=23% Similarity=0.321 Sum_probs=95.6
Q ss_pred eEEEE---CCccCHHHHHHHHHHHHHcCc--------CCcCCHHHHH------------hhcCcEEEEEECCEEEEEEEE
Q 013702 278 EGTRT---AKVTDLSGIKQIIQPLVESGA--------LVRRTDEELL------------KALDSFYVVEREGQIIACAAL 334 (438)
Q Consensus 278 ~~IR~---at~~D~~~I~~L~~~~~~~~~--------~~~~~~e~l~------------~~~~~~~V~~~dg~iVG~~~l 334 (438)
..||+ ++++|++.+.+++........ ......+.+. .....++++..++++||++.+
T Consensus 5 ~~ir~~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~ 84 (190)
T 2gan_A 5 KKIKNPSTVKDELLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLKFRLSQEFDELYTYQKDNRIIGTIAL 84 (190)
T ss_dssp EECSSGGGGHHHHHHHHHHHHHHTTTCSSCCTTCSSCCCTTCHHHHHHHHHHHHHHHHHTTCSEEEEEEESSCEEEEEEE
T ss_pred eeecCccccchhHhhhHheehhhhcccChHHHHhhccCCHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEE
Confidence 46888 899999999999876533321 1111222221 122457888899999999999
Q ss_pred ee-ec-------------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHH-HHHCCCeE
Q 013702 335 FP-FF-------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADW-FKSRGFRE 397 (438)
Q Consensus 335 ~~-~~-------------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~f-Y~k~GF~~ 397 (438)
.. .. ....++|..++|+|+|||+|||++|++.+++++++.|++.+.+.. ..+.+| |+|+||+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~n~~a~~~~y~k~GF~~ 164 (190)
T 2gan_A 85 VYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKDPYVVTFPNLEAYSYYYMKKGFRE 164 (190)
T ss_dssp ECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCEEEEEECGGGSHHHHHHHTTTEEE
T ss_pred EecccccccccccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEecCCccccccEEecCCCEE
Confidence 85 32 224899999999999999999999999999999999999998864 478999 99999999
Q ss_pred ecee
Q 013702 398 CSIE 401 (438)
Q Consensus 398 ~g~~ 401 (438)
.+..
T Consensus 165 ~~~~ 168 (190)
T 2gan_A 165 IMRY 168 (190)
T ss_dssp EECC
T ss_pred eecc
Confidence 8754
|
| >3c26_A Putative acetyltransferase TA0821; NP_394282.1, A putative acetyltransferase, acetyltransferase family, structural genomics; 2.00A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=125.99 Aligned_cols=124 Identities=15% Similarity=0.128 Sum_probs=95.4
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcC-----c---CC-----cCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESG-----A---LV-----RRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKE 340 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~-----~---~~-----~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~ 340 (438)
+.+.||+++++|++.+.+++...+... + .. ....+.+...+ ..++++..++++||++.+... ..
T Consensus 4 m~i~IR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~va~~~g~iVG~~~~~~~-~~ 82 (266)
T 3c26_A 4 ADIVFDRGSPSDIDEIKTFTSNTWKVGYYTDLYSKLADTGTMDDYVDKVIERWVNDGSVYVLRVSGRPVATIHMEKL-PD 82 (266)
T ss_dssp --CEEEECCGGGHHHHTTCBSCCSCTTHHHHHHHHHHTTSSHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEEC-TT
T ss_pred ceEEEEECCHHHHHHHHHHHHHHhhcccccccccccccchhhhHHHHHHHHHhccCCcEEEEEECCEEEEEEEEEEc-CC
Confidence 347899999999999999864332111 0 00 11122233222 468888999999999999854 36
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
..++|..++|+|+|||||+|++|++.+++++++.|++.+ +.+ ..+.+||+|+||+..+..
T Consensus 83 ~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i-l~v~~~N~~a~~~Yek~GF~~~~~~ 146 (266)
T 3c26_A 83 GSVMLGGLRVHPEYRGSRLGMSIMQETIQFLRGKTERLR-SAVYSWNEPSLRLVHRLGFHQVEEY 146 (266)
T ss_dssp SCEEEEEEEECGGGTTSSHHHHHHHHHHHHHBTTBSEEE-EEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred CeEEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEE-EEEcCCCHHHHHHHHHCCCEEeeEE
Confidence 789999999999999999999999999999998999999 776 489999999999988753
|
| >3s6f_A Hypothetical acetyltransferase; acyl-COA N-acyltransferases, structural genomics, joint CENT structural genomics, JCSG; HET: MSE COA; 1.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.1e-13 Score=115.47 Aligned_cols=118 Identities=16% Similarity=0.203 Sum_probs=89.1
Q ss_pred eeEEEECC-ccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEE-CCEEEEEEEEeeecCCCeEEEEEEEEC
Q 013702 277 YEGTRTAK-VTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVER-EGQIIACAALFPFFKEKCGEVAAIGVS 351 (438)
Q Consensus 277 ~~~IR~at-~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~-dg~iVG~~~l~~~~~~~~~~I~~v~V~ 351 (438)
++.++... +.|.+++.+++ ..+..+.+.+.+...+ ..++++.+ ++++||++.+.. .....++|..++|+
T Consensus 9 ~i~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~-~~~~~~~i~~l~V~ 82 (145)
T 3s6f_A 9 DIQFQTTLEGVTPAQLGGFF-----EGWPNPPTPETLWRILDRAAVFVLARTPDGQVIGFVNALS-DGILAASIPLLEVQ 82 (145)
T ss_dssp GCEEESSCTTCCGGGSCSCC-----TTCSSCCCHHHHHHHHHHSSEEEEEECTTCCEEEEEEEEE-CSSSEEECCCEEEC
T ss_pred heEEeeccccCCHHHHHHHH-----hcCCCCCCHHHHHHHhccCceEEEEECCCCCEEEEEEEEe-cCCcEEEEEEEEEC
Confidence 35677754 77888877775 2233334555555444 34566666 799999998874 34568899999999
Q ss_pred ccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceec
Q 013702 352 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 352 p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~ 402 (438)
|+|||+|+|++|++.++++++ +...+.+.+ +.+.+||+|+||+..+...
T Consensus 83 p~~rg~GiG~~Ll~~~~~~~~--~~~~~~l~~~~~a~~fY~k~GF~~~~~~~ 132 (145)
T 3s6f_A 83 AGWRSLGLGSELMRRVLTELG--DLYMVDLSCDDDVVPFYERLGLKRANAMF 132 (145)
T ss_dssp TTSCSSSHHHHHHHHHHHHHC--SCSEEECCCCGGGHHHHHHTTCCCCCCCC
T ss_pred HHHhcCcHHHHHHHHHHHHhc--CCCeEEEEECHHHHHHHHHCCCEECCcEE
Confidence 999999999999999999996 556666666 6899999999999987543
|
| >3n7z_A Acetyltransferase, GNAT family; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.75A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.2e-12 Score=130.68 Aligned_cols=120 Identities=18% Similarity=0.249 Sum_probs=96.4
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhh------cCcEEEEEECCEEEEEEEEeeecC---C---CeE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK---E---KCG 343 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~------~~~~~V~~~dg~iVG~~~l~~~~~---~---~~~ 343 (438)
+.+.||+++++|++.+.+|+...+.. +++.+.+..+ ...++++++++++||++.+.++.. . ..+
T Consensus 2 m~~~iR~~~~~D~~~i~~L~~~~f~~----~~~~~~~~~~~~~~~~~~~~~v~~~~g~lvG~~~~~~~~~~~~~~~~~~~ 77 (388)
T 3n7z_A 2 NAMNVIRLKEDKFREALRLSEYAFQY----KVDEDRLQQQITKMKESHEVYGIMEGENLAAKLHLIPFHIYIGKEKFKMG 77 (388)
T ss_dssp --CCEEECCGGGHHHHHHHHHHHTTC----CCCHHHHHHHHHHHHHHCEEEEEEETTEEEEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEECCHHHHHHHHHHHHHhCCC----CCChHHHHHHHHhhcCcccEEEEEECCEEEEEEEEEeEEEEECCEEEEee
Confidence 34679999999999999998776543 3444433322 156889999999999999776421 1 357
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
+|..++|+|+|||||+|++||+++++++++.|+..+.+. ..+..||+|+||+..+.
T Consensus 78 ~i~~v~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~l~-~~a~~~Y~~~Gf~~~~~ 133 (388)
T 3n7z_A 78 GVAGVATYPEYRRSGYVKELLQHSLQTMKKDGYTVSMLH-PFAVSFYRKYGWELCAN 133 (388)
T ss_dssp EEEEEEECGGGGGGCHHHHHHHHHHHHHHHHTCCEEEEC-CSCHHHHHTTTCEEEEE
T ss_pred EEEEEEECHHHCCCChHHHHHHHHHHHHHHCCCcEEEEc-cCChhhhhhcCcEEecc
Confidence 899999999999999999999999999999999888776 46799999999998874
|
| >1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=8.2e-12 Score=110.39 Aligned_cols=92 Identities=21% Similarity=0.273 Sum_probs=79.1
Q ss_pred HHHHHhhc--CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---
Q 013702 309 DEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--- 383 (438)
Q Consensus 309 ~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--- 383 (438)
.+.+...+ ..++++..++++||++.+.+ .....++|..++|+|+|||+|+|++|++.+++++++.|+..+.+.+
T Consensus 29 ~~~~~~~l~~~~~~v~~~~~~~vG~~~~~~-~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~ 107 (163)
T 1yvk_A 29 KDIVDEYLERGECYTAWAGDELAGVYVLLK-TRPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNS 107 (163)
T ss_dssp HHHHHHHHHHSEEEEEEETTEEEEEEEEEE-CSTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEEEe-cCCCeEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 34444433 56788889999999999984 3568899999999999999999999999999999999999999888
Q ss_pred -HHHHHHHHHCCCeEecee
Q 013702 384 -TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 384 -~~a~~fY~k~GF~~~g~~ 401 (438)
..+.+||+|+||+..+..
T Consensus 108 n~~a~~~y~k~GF~~~~~~ 126 (163)
T 1yvk_A 108 SIHQLSLYQKCGFRIQAID 126 (163)
T ss_dssp CHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHCCCEEecee
Confidence 358999999999998754
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.38 E-value=2.5e-12 Score=130.02 Aligned_cols=118 Identities=19% Similarity=0.346 Sum_probs=96.8
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHH---hhcCcEEEEEECCEEEEEEEEeeec------CCCeEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL---KALDSFYVVEREGQIIACAALFPFF------KEKCGEVAAI 348 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~---~~~~~~~V~~~dg~iVG~~~l~~~~------~~~~~~I~~v 348 (438)
+.||+++++|++.+.+++...+... ++.+.+. .....++++++++++||++.+.+.. ....+++..+
T Consensus 10 ~~iR~~~~~D~~~i~~l~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~g~~vG~~~~~~~~~~~~g~~~~~~~i~~v 85 (396)
T 2ozg_A 10 FKYTKASQENIQQLGNILEQCFVMS----FGDSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAV 85 (396)
T ss_dssp EEEEECCTTTHHHHHHHHHHHTTCC----TTHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHcCCC----CChHHHHhhhcccCcEEEEEECCEEEEEEEEEeccceECCeecceeEEEEE
Confidence 6899999999999999987765432 2233333 2223488899999999999998642 2356789999
Q ss_pred EECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 349 ~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
+|+|+|||||+|++|++++++++++.|+..+.+ ...+.+||+|+||+..+.
T Consensus 86 ~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~i~l-n~~a~~~Y~~~GF~~~~~ 136 (396)
T 2ozg_A 86 GIAPEYRGDGAAIALIQHTLQEISEQDIPISVL-YPATQRLYRKAGYEQAGS 136 (396)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEE-CCSCHHHHHHTTCEEEEE
T ss_pred EEChhhccCCHHHHHHHHHHHHHHHCCCeEEEE-ccccHHHHHhcCCeEccc
Confidence 999999999999999999999999999999988 457899999999998874
|
| >2i00_A Acetyltransferase, GNAT family; structural genomics, PSI-2, structure initiative, midwest center for structural genomic transferase; 2.30A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.9e-12 Score=129.28 Aligned_cols=123 Identities=15% Similarity=0.230 Sum_probs=95.4
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcC-----CcCCHHHHHhh------cCcEEEEEECCEEEEEEEEeeecC------
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGAL-----VRRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK------ 339 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~-----~~~~~e~l~~~------~~~~~V~~~dg~iVG~~~l~~~~~------ 339 (438)
.++||+++++|++.+.+|+...+..... ..|+.+..... ...++++++++++||++.+.++..
T Consensus 9 ~~~iR~~~~~D~~~i~~l~~~~f~~~~~~l~~~~~w~~~~~~~~~~~~~~~~~~~va~~~g~lVG~~~~~~~~~~~~g~~ 88 (406)
T 2i00_A 9 QLTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGAL 88 (406)
T ss_dssp -CEEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEE
T ss_pred cceEEECCHHHHHHHHHHHHHHcCCCCcccccccccccHHHHHHhhhccccccEEEEEECCEEEEEEEEEEEEEEECCEE
Confidence 3679999999999999998765433211 12332322221 256789999999999999876431
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
...++|..++|+|+|||||||++||+++++++++.|+..+.+.+. +.+||+|+||+..+.
T Consensus 89 ~~~~~i~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~~-~~~fY~r~GF~~~~~ 148 (406)
T 2i00_A 89 YKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFPY-NIPYYRRKGWEIMSD 148 (406)
T ss_dssp EEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECCS-CHHHHHHTTCEEEEE
T ss_pred EEeccEEEEEEChhhCCCCHHHHHHHHHHHHHHhCCCeEEEEEcc-ChhhhhccCceEccc
Confidence 146789999999999999999999999999999999988777653 699999999998864
|
| >2hv2_A Hypothetical protein; PSI, protein structure initiative, midwest center for struct genomics, MCSG, structural genomics, unknown function; HET: EPE PG4; 2.40A {Enterococcus faecalis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=99.36 E-value=4.4e-12 Score=128.53 Aligned_cols=122 Identities=11% Similarity=0.178 Sum_probs=95.3
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHh--hcCcEEEEEECCEEEEEEEEeeecC------CCeEEEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK--ALDSFYVVEREGQIIACAALFPFFK------EKCGEVAAI 348 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~--~~~~~~V~~~dg~iVG~~~l~~~~~------~~~~~I~~v 348 (438)
++.||+++++|++.+.+|+...+....... ..+.+.. ....++++++++++||++.+.++.. ...++|..+
T Consensus 6 ~~~iR~~~~~D~~~i~~l~~~~f~~~~~~~-~~~~~~~~~~~~~~~va~~~g~~vg~~~~~~~~~~~~g~~~~~~~i~~v 84 (400)
T 2hv2_A 6 TKRVKKMGKEEMKEMFDLVIYAFNQEPTAE-RQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYV 84 (400)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHTTCCCCHH-HHHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHHHcCCCCcHH-HHHHHHhhcccCcEEEEEECCEEEEEEEEeeeEEEECCEEEEeccEeEE
Confidence 468999999999999999877654421100 0122222 1256889999999999999876431 145789999
Q ss_pred EECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 349 ~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
+|+|+|||||+|++||+++++.+++.|+..+.+.+ .+.+||+|+||+..+.
T Consensus 85 ~V~p~~Rg~Gig~~Ll~~~~~~~~~~g~~~~~L~~-~~~~~Y~~~GF~~~~~ 135 (400)
T 2hv2_A 85 ASYPEYRGEGGISAIMKEMLADLAKQKVALSYLAP-FSYPFYRQYGYEQTFE 135 (400)
T ss_dssp EECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHTTTCEECCE
T ss_pred EEChhhcCCCHHHHHHHHHHHHHHHcCceEEEEec-CCHhHHHhcCCEEece
Confidence 99999999999999999999999999998887765 3589999999998763
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-11 Score=119.82 Aligned_cols=125 Identities=19% Similarity=0.154 Sum_probs=99.5
Q ss_pred eeEEEECCcc-CHHHHHHHHHHHHHcCc-CCcCCHHHHHhhc-------CcEEEEE------ECCEEEEEEEEeeecC-C
Q 013702 277 YEGTRTAKVT-DLSGIKQIIQPLVESGA-LVRRTDEELLKAL-------DSFYVVE------REGQIIACAALFPFFK-E 340 (438)
Q Consensus 277 ~~~IR~at~~-D~~~I~~L~~~~~~~~~-~~~~~~e~l~~~~-------~~~~V~~------~dg~iVG~~~l~~~~~-~ 340 (438)
.+.||+++.+ |.+.+.+++...+.... ..+++.+.+...+ ..+++++ .++++|||+.+..... .
T Consensus 154 ~~~ir~~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~g~~vG~~~~~~~~~~~ 233 (318)
T 1p0h_A 154 GVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDHP 233 (318)
T ss_dssp TEEEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTTST
T ss_pred CeEEEecCcccchHHHHHHHHHHhccCCCCCCcCHHHHHHHhhCcccCcCceEEEEeccccCCCCcEEEEEEeeccCCCC
Confidence 4689999999 99999999887655422 2356666665543 3577887 7899999999875432 3
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCC----------CEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL----------DMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~----------~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
..++|..++|+|+|||+|+|++|+..+++++++.|+ +.+.+.+ ..+.+||+++||+..+..
T Consensus 234 ~~~~i~~~~V~p~~rg~Glg~~ll~~~~~~~~~~g~~~~~~~~~~~~~i~l~v~~~N~~a~~~y~~~GF~~~~~~ 308 (318)
T 1p0h_A 234 GLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVD 308 (318)
T ss_dssp TEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred ceEEEEEEEECHHhccCCHHHHHHHHHHHHHHHcccccccccccccceEEEEecCCCHHHHHHHHhcCCEEEeEE
Confidence 489999999999999999999999999999999999 8888877 479999999999998754
|
| >3frm_A Uncharacterized conserved protein; APC61048, staphylococcus epidermidis ATCC structural genomics, PSI-2, protein structure initiative; HET: MES; 2.32A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.1e-12 Score=123.37 Aligned_cols=123 Identities=11% Similarity=0.128 Sum_probs=90.1
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcC---CHHHHHhhc----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRR---TDEELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGEVAAI 348 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~---~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v 348 (438)
..+.||+++.+|++.+.++....... +..++ ..+.+...+ ..++++..++++||++.+.. ....++|..+
T Consensus 117 ~~i~Ir~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~va~~~g~~vG~~~~~~--~~~~~~i~~l 193 (254)
T 3frm_A 117 RDVDIQLVSSNNINDYLHVYDAFARP-FGDSYANMVKQHIYSSYNLDDIERLVAYVNHQPVGIVDIIM--TDKTIEIDGF 193 (254)
T ss_dssp CSCEEEECCTTTHHHHHHHHTTSCCT-TCHHHHHHHHHHHHHHTTTSSCEEEEEEETTEEEEEEEEEE--CSSCEEEEEE
T ss_pred CceEEEECCccCHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEEE--cCCEEEEEEE
Confidence 45789999999999999986532111 11111 112222222 36788999999999999984 3567899999
Q ss_pred EECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEecee
Q 013702 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 401 (438)
Q Consensus 349 ~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~ 401 (438)
+|+|+|||||||++|++.++++|+..++..+......+.+||+|+||+.++..
T Consensus 194 ~V~p~~Rg~GiG~~Ll~~~~~~a~~~~i~lv~~~n~~a~~~Y~k~GF~~~g~~ 246 (254)
T 3frm_A 194 GVLEEFQHQGIGSEIQAYVGRMANERPVILVADGKDTAKDMYLRQGYVYQGFK 246 (254)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHTTCCEEEEECSSCTTHHHHHHTTCEEEEEE
T ss_pred EECHHHcCCCHHHHHHHHHHHHhccCcEEEEECCchHHHHHHHHCCCEEeeeE
Confidence 99999999999999999999999554433321111579999999999998764
|
| >4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.5e-12 Score=126.88 Aligned_cols=123 Identities=13% Similarity=0.013 Sum_probs=92.7
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHH----cCcC-C-cCCHHHHHhhc------CcEEEEEECCEEEEEEEEeeecC-CCe
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVE----SGAL-V-RRTDEELLKAL------DSFYVVEREGQIIACAALFPFFK-EKC 342 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~----~~~~-~-~~~~e~l~~~~------~~~~V~~~dg~iVG~~~l~~~~~-~~~ 342 (438)
..+.||+++++|.+.+.+++..... ..+. . ..+.+...... ...+++.+++++||++.+..... ...
T Consensus 154 ~~l~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~ 233 (333)
T 4ava_A 154 TQLMLRPVLPGDRERTVHGHIQFSGETLYRRFMSARVPSPALMHYLSEVDYVDHFVWVVTDGSDPVADARFVRDETDPTV 233 (333)
T ss_dssp CEEEEEECCTTCGGGTCCCSSCCCHHHHHGGGCC-----HHHHHHHHHHCCSSEEEEEEEETTEEEEEEEEEECSSCTTE
T ss_pred CEEEecCCChhHHHHHHHHHHhCChhhHHHHHcCCCCCCHHHHHHHhccCccccEEEEEEeCCCeEEEEEEEecCCCCCe
Confidence 4578999999999998877653211 1111 1 12222222111 24678889999999999986544 366
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEec
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 399 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g 399 (438)
+++ .++|+|+|||+|||++|++.+++++++.|++++.+.+ .++++||+|+||+..+
T Consensus 234 ~e~-~~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~ 293 (333)
T 4ava_A 234 AEI-AFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQR 293 (333)
T ss_dssp EEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCCCEE
T ss_pred EEE-EEEECHHhcCCCHHHHHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCceec
Confidence 777 7999999999999999999999999999999999888 5899999999999763
|
| >3r1k_A Enhanced intracellular surviVal protein; GNAT, acetyltransferase, transferase; HET: COA; 1.95A {Mycobacterium tuberculosis} PDB: 3sxo_A 3ryo_A 3uy5_A | Back alignment and structure |
|---|
Probab=99.32 E-value=4.6e-12 Score=130.40 Aligned_cols=121 Identities=12% Similarity=0.143 Sum_probs=95.6
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHH---Hhhc--CcEEEEEEC----CEEEEEEEEeeecC---C---
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEEL---LKAL--DSFYVVERE----GQIIACAALFPFFK---E--- 340 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l---~~~~--~~~~V~~~d----g~iVG~~~l~~~~~---~--- 340 (438)
+.+.||+++++|++.+.+|+...+.. +++.+.. ...+ ..+++++++ +++||++.+.+... .
T Consensus 27 m~~~IR~~~~~D~~~i~~L~~~~F~~----~~~~~~~~~~~~~~~~~~~~va~~~~~~~g~lVG~~~~~~~~~~~~gg~~ 102 (428)
T 3r1k_A 27 MTVTLCSPTEDDWPGMFLLAAASFTD----FIGPESATAWRTLVPTDGAVVVRDGAGPGSEVVGMALYMDLRLTVPGEVV 102 (428)
T ss_dssp --CEEECCCGGGHHHHHHHHHHHCTT----CCCHHHHHHHGGGSCTTCEEEEECC----CCEEEEEEEEEEEEEETTTEE
T ss_pred CceEEEECCHHHHHHHHHHHHHHcCC----CCChHHHHHHHhhcCCCcEEEEEecCCCCCcEEEEEEEEeeeeccCCCcc
Confidence 45789999999999999998876532 3333332 2222 467888876 99999999876431 1
Q ss_pred -CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEecee
Q 013702 341 -KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 -~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~ 401 (438)
..++|..++|+|+|||||||++||+++++.+++.|+..+.+.+ .+..||+|+||+..+..
T Consensus 103 ~~~~~I~~v~V~P~~Rg~Gig~~Ll~~~l~~a~~~g~~~~~L~~-~a~~fY~r~GF~~~~~~ 163 (428)
T 3r1k_A 103 LPTAGLSFVAVAPTHRRRGLLRAMCAELHRRIADSGYPVAALHA-SEGGIYGRFGYGPATTL 163 (428)
T ss_dssp EEEEEEEEEEECTTSCSSSHHHHHHHHHHHHHHHTTCSEEEEEC-SSTTSSGGGTCEECCEE
T ss_pred cceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEec-CCHHHHHhCCCEEeeeE
Confidence 3578999999999999999999999999999999998887764 46899999999988743
|
| >3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.4e-11 Score=117.99 Aligned_cols=121 Identities=20% Similarity=0.196 Sum_probs=94.4
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhcC-------cEEEEEECCEEEEEEEEeeecCCCeEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD-------SFYVVEREGQIIACAALFPFFKEKCGEVAAIG 349 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~~-------~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~ 349 (438)
+.||+++.+|++.+.+|+...+..... ...+.+.+...+. .+++++.+|++||++.+... .....+..++
T Consensus 13 ~~iR~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~--~~~~~~~~~~ 90 (330)
T 3tt2_A 13 FIARAPVPADAPAIARLIAACQEADGDEPDASAEEVLRDWEGLDLGQEAVLVVAPDGEAAAYADVLNR--RYVQLSVYGY 90 (330)
T ss_dssp CEEECCCGGGHHHHHHHHHHHHHHTTCCCCCCHHHHHHHTTTSCHHHHEEEEECTTSSEEEEEEEEEE--TTTEEEEEEE
T ss_pred eeeCCCChHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHhhccCcccceEEEECCCCcEEEEEEEEec--CCeEEEEEEE
Confidence 679999999999999999987765443 4456666665542 46677778999999999643 2334455799
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHC-------CCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASL-------GLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~-------g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
|+|+|||+|||++|++++++++++. +...+.+.+ ..+.+||+++||+....
T Consensus 91 V~p~~rg~Gig~~Ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~y~~~Gf~~~~~ 152 (330)
T 3tt2_A 91 VHPRFRGMGLGTWLVQWGEEWIQDRMHLAPAEAQVTVQHYIRASSTSALRLMEQHGYRPVRD 152 (330)
T ss_dssp ECTTSTTSSHHHHHHHHHHHHHHHHGGGSCTTBCEEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred ECccccCccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeccccCChHHHHHHHhCCCceEEE
Confidence 9999999999999999999999886 445554444 57899999999998753
|
| >3sxn_A Enhanced intracellular surviVal protein; GNAT fold, acetyltransferase, acetyl COA binding, transferas; HET: COA; 2.03A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.27 E-value=5e-12 Score=129.81 Aligned_cols=119 Identities=14% Similarity=0.201 Sum_probs=96.0
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHH---HHHhhc--CcEEEEEEC--CEEEEEEEEeeec----CC---CeE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE---ELLKAL--DSFYVVERE--GQIIACAALFPFF----KE---KCG 343 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e---~l~~~~--~~~~V~~~d--g~iVG~~~l~~~~----~~---~~~ 343 (438)
+.||+++++|++.+.+++...+.. +.+.+ .+...+ ..+++++++ +++||++.+.+.. .. ..+
T Consensus 25 m~IR~~~~~D~~~i~~L~~~~F~~----~~~~~~~~~~~~~~~~~~~~va~~~~~g~lvG~~~~~~~~~~~~g~~~~~~~ 100 (422)
T 3sxn_A 25 RTLHTITDDDWTRIALLARFAFGD----IEPEQTQAAWRSMVPEDATVVVPDETDDAFVGQSLYLDMQLTVPGGEVLPVA 100 (422)
T ss_dssp EEESSCCHHHHHHHHHHHHHHHSC----CCCHHHHHHHHTTCCTTCEEEEECTTSSSEEEEEEEEEEEEECTTSCEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHcCC----CCChHHHHHHHhhcCCCcEEEEEECCCCcEEEEEEEEEeEeecCCCcccccc
Confidence 589999999999999999877633 23332 232222 468899999 9999999987643 11 358
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEecee
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSIE 401 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~~ 401 (438)
+|..++|+|+|||||||++||+++++.+++.|+..+.+.+ .+..||+|+||+..+..
T Consensus 101 ~I~~v~V~P~~Rg~Gig~~Ll~~~l~~~~~~g~~~~~L~~-~~~~fY~r~GF~~~~~~ 157 (422)
T 3sxn_A 101 GISFVAVAPTHRRRGVLRAMYTELHDRIARAGYPLAVLTA-SEGGIYGRFGYGVATIE 157 (422)
T ss_dssp EEEEEEECTTTTTSSHHHHHHHHHHHHHHHHTCSEEEECC-SSTTSSGGGTCEECCEE
T ss_pred eEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCcEEEEec-CCHHHHHhCCCEEecee
Confidence 8999999999999999999999999999999998877754 46799999999998753
|
| >2pr1_A Uncharacterized N-acetyltransferase YLBP; YIBP protein, coenzyme A, structural GE PSI-2, protein structure initiative; HET: SUC COA; 3.20A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.6e-11 Score=105.60 Aligned_cols=109 Identities=14% Similarity=0.313 Sum_probs=84.2
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecC---------CCeEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFK---------EKCGEVA 346 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~---------~~~~~I~ 346 (438)
.+..||+++.+|++.+.++....+... ....++++..+++++|++.+..... ...++|.
T Consensus 19 ~~~~iR~~~~~D~~~i~~l~~~~~~~~------------~~~~~~~~~~~~~~~g~~~~~~~~~~i~G~~~~~~~~~~i~ 86 (163)
T 2pr1_A 19 EFKKFKEYGIQELSMLEELQDNIIEND------------STSPFYGIYFGDKLVARMSLYQVNGKSNPYFDNRQDYLELW 86 (163)
T ss_dssp HHTTSSSCCHHHHHHHHHHHHCGGGTT------------EEEEEEEEEETTEEEEEEEEEEECTTSSCCSGGGCCEEEEE
T ss_pred ceeeeEEcChhhHHHHHHHHHHhhccc------------cCCceEEEEeCCceeEEEEEEecCCeeeeEEecCCCEEEEE
Confidence 344689999999999999976433221 1234577788999999998875432 3478999
Q ss_pred EEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 347 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 347 ~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
.++|+|+|||+|||++|++.+++. ++ .+.+.+ +.+.+||+|+||+..+..
T Consensus 87 ~l~V~p~~rg~GiG~~Ll~~~~~~----g~-~l~~~~~n~a~~fY~k~GF~~~~~~ 137 (163)
T 2pr1_A 87 KLEVLPGYQNRGYGRALVEFAKSF----KM-PIRTNPRMKSAEFWNKMNFKTVKYD 137 (163)
T ss_dssp EEEECTTSTTSSHHHHHHHHHHTT----CS-CEEECCCGGGHHHHHHTTCEECCCC
T ss_pred EEEECHHHcCCCHHHHHHHHHHHc----Cc-EEEEecCchHHHHHHHcCCEEeeeE
Confidence 999999999999999999999983 54 355544 578999999999998764
|
| >2wpx_A ORF14; transferase, acetyl transferase, antibiotic biosynthesis; HET: ACO; 2.31A {Streptomyces clavuligerus} PDB: 2wpw_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=9e-11 Score=114.80 Aligned_cols=83 Identities=11% Similarity=-0.033 Sum_probs=72.6
Q ss_pred EEEEEE--CCEEEEEEEEeeec-CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH--CCCCEEEEEc----HHHHHH
Q 013702 319 FYVVER--EGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS--LGLDMLFLLT----TRTADW 389 (438)
Q Consensus 319 ~~V~~~--dg~iVG~~~l~~~~-~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~--~g~~~l~l~t----~~a~~f 389 (438)
++++.+ +|++|||+.+.... ....+++..++|+|+|||+|+|++|+..+++++++ .|+..+.+.+ ..+++|
T Consensus 237 ~~~~~~~~~g~~vG~~~~~~~~~~~~~~~i~~~~V~p~~rg~G~g~~L~~~~~~~~~~~~~g~~~~~l~v~~~N~~a~~l 316 (339)
T 2wpx_A 237 HTGAVHDATGALAGYTSVSKTTGNPAYALQGMTVVHREHRGHALGTLLKLANLEYVLRHEPEVRLVETANAEDNHPMIAV 316 (339)
T ss_dssp EEEEEETTTTEEEEEEEEEECSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHHCTTCCEEEEEEETTCHHHHHH
T ss_pred EEEEEeCCCCcEEEEEEEEccCCCCceEEEeeEEECHHhcCccHHHHHHHHHHHHHHHhCCCceEEEEecccccHHHHHH
Confidence 566666 89999999987532 34589999999999999999999999999999999 9999998877 478999
Q ss_pred HHHCCCeEecee
Q 013702 390 FKSRGFRECSIE 401 (438)
Q Consensus 390 Y~k~GF~~~g~~ 401 (438)
|+++||+..+..
T Consensus 317 y~~~Gf~~~~~~ 328 (339)
T 2wpx_A 317 NAALGFEPYDRW 328 (339)
T ss_dssp HHHTTCEEEEEE
T ss_pred HHHcCCEEeccE
Confidence 999999998754
|
| >3g3s_A GCN5-related N-acetyltransferase; ZP_00874857.1, acetyltransferase (GNAT) family, structural joint center for structural genomics, JCSG; HET: MSE; 1.80A {Streptococcus suis} | Back alignment and structure |
|---|
Probab=99.21 E-value=8.6e-11 Score=112.32 Aligned_cols=121 Identities=11% Similarity=0.003 Sum_probs=89.3
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCCcC-CHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcc
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRR-TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 353 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~-~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~ 353 (438)
...+.||+++++|++.+.+.. ++..+...+ +.+.+... ...+++.+++++||++.+... .....++ .++|+|+
T Consensus 121 p~~~~ir~~d~~d~~~~~~~~---w~~~~~~~~~~~~~~~~~-g~~~v~~~~g~iVG~~~~~~~-~~~~~ei-~i~v~p~ 194 (249)
T 3g3s_A 121 PESFDMKLIDRNLYETCLVEE---WSRDLVGNYIDVEQFLDL-GLGCVILHKGQVVSGASSYAS-YSAGIEI-EVDTRED 194 (249)
T ss_dssp CTTSEEEECCHHHHHHHHHST---TTGGGTTTSSSHHHHHHH-CCEEEEEETTEEEEEEEEEEE-ETTEEEE-EEEECGG
T ss_pred CCCcEEEECCHHHHHHHHhcc---CHHHHHHhccCHHHHHhC-CcEEEEEECCEEEEEEEEEEe-cCCeEEE-EEEEChH
Confidence 345689999999998876321 222222112 33444333 556778889999999988754 4455666 7999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
|||||+|++|++.++++|++.|+....... .++.+||+|+||+..+..
T Consensus 195 ~rGkGlg~~Ll~~li~~a~~~g~~~~~~~~N~~a~~lYeKlGF~~~g~~ 243 (249)
T 3g3s_A 195 YRGLGLAKACAAQLILACLDRGLYPSWDAHTLTSLKLAEKLGYELDKAY 243 (249)
T ss_dssp GTTSSHHHHHHHHHHHHHHHTTCEEECEESSHHHHHHHHHHTCCEEEEE
T ss_pred hcCCCHHHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHCCCEEeeeE
Confidence 999999999999999999999987443322 689999999999998754
|
| >2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=7.2e-11 Score=113.86 Aligned_cols=122 Identities=11% Similarity=-0.025 Sum_probs=91.3
Q ss_pred ceeEEEECCcc-CHHHHHHHHHHHHHcCcC---CcCCHHHHHhh--------cCcEEEEEE--CCEEEEEEEEeeecCCC
Q 013702 276 LYEGTRTAKVT-DLSGIKQIIQPLVESGAL---VRRTDEELLKA--------LDSFYVVER--EGQIIACAALFPFFKEK 341 (438)
Q Consensus 276 ~~~~IR~at~~-D~~~I~~L~~~~~~~~~~---~~~~~e~l~~~--------~~~~~V~~~--dg~iVG~~~l~~~~~~~ 341 (438)
..+.||+++++ |++.+.+++.......+. .....+.+... -...+++.. ++++ |++.+.....
T Consensus 15 ~~l~lR~~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~~-G~~~~~~~~~-- 91 (301)
T 2zw5_A 15 ARLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVP-GMAGLLGGTD-- 91 (301)
T ss_dssp SSCEEEECCHHHHHHHHHHHHTCHHHHTTSSSCCCSSHHHHHHHHHHHHHSTTCEEEECCBTTTBCC-EEEEEESSCS--
T ss_pred CCEEEEeCchhcCHHHHHHHhcCchhhhhcCCChHHHHHHHHHHHHHhhccCCceEEEEEECCCCCe-EEEEEecCCC--
Confidence 34689999999 999999998764433222 22223333221 122344433 6889 9999985433
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHH-HCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~-~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.+++. ++|+|+|||||||++|++.+++++. +.|+.++.+.+ .++++||+|+||+..+..
T Consensus 92 ~~~ig-~~v~~~~~g~G~g~~l~~~l~~~a~~~~g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~ 155 (301)
T 2zw5_A 92 VPGLT-WLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARL 155 (301)
T ss_dssp SCEEE-EEECTTSTTTTHHHHHHHHHHHHHHTTTCCSEEEEEEESSCHHHHHHHHHTTCEEEEEE
T ss_pred eEEEE-EEECHhHcCCCHHHHHHHHHHHHHHhcCCccEEEEEeCCCCHHHHHHHHHcCCcCccee
Confidence 67784 8899999999999999999999994 57999999988 589999999999998853
|
| >2q04_A Acetoin utilization protein; ZP_00540088.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.33A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
Probab=99.18 E-value=4.1e-11 Score=111.76 Aligned_cols=103 Identities=17% Similarity=0.110 Sum_probs=77.7
Q ss_pred CcEEEEEECCEEEEEEEEeeecC---------CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEE--------
Q 013702 317 DSFYVVEREGQIIACAALFPFFK---------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML-------- 379 (438)
Q Consensus 317 ~~~~V~~~dg~iVG~~~l~~~~~---------~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l-------- 379 (438)
..+++++.++++|||+.+.+... ...++|..++|+|+|||+|||++||+.+++++++.++..+
T Consensus 61 ~~~~vA~~dg~iVG~~~l~~~~~~~~~~~~~~~~~~el~~i~V~p~~RG~GIG~~Ll~~~~~~a~~~~~i~l~~~~~~~~ 140 (211)
T 2q04_A 61 GRIIIARQGNDIIGYVTFLYPDPYETWSEGNNPYILELGAIEVAARFRGQQIGKKLLEVSMLDPAMEHYLILTTEYYWHW 140 (211)
T ss_dssp CEEEEEEETTEEEEEEEEECCCTTSGGGCSSCTTEEEEEEEEECGGGTTSCHHHHHHHHHHTSGGGGGSEEEEEECGGGC
T ss_pred cEEEEEEECCEEEEEEEEEeCCcccccccccccceEEEeEEEECHHHcCCCHHHHHHHHHHHHHHHcCCceeeeehhhhc
Confidence 46788999999999999875421 1478898899999999999999999999999877664333
Q ss_pred -----EEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCC
Q 013702 380 -----FLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLP 426 (438)
Q Consensus 380 -----~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~ 426 (438)
.+.+ ..|++||+|+||+..+..+.... + ..+.++|.++-+
T Consensus 141 ~~~~~~L~V~~~N~~A~~lY~k~GF~~~g~~~~~~~----~---~~d~~~M~r~g~ 189 (211)
T 2q04_A 141 DLKGSGLSVWDYRKIMEKMMNHGGLVFFPTDDPEIA----S---HPANCLMARIGK 189 (211)
T ss_dssp CHHHHCCCHHHHHHHHHHHHHHTTCEEECCCCHHHH----T---STTCEEEEEECT
T ss_pred CccccccchhhhhHHHHHHHHHCCCEEeccCCcccc----c---cHHHHhhhhhcC
Confidence 2333 47899999999999997532111 1 234688877655
|
| >1r57_A Conserved hypothetical protein; GCN5, N-acetyltransferase, structural genomics, PSI, protein structure initiative; NMR {Staphylococcus aureus} SCOP: d.108.1.1 PDB: 2h5m_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=7.2e-11 Score=96.41 Aligned_cols=81 Identities=21% Similarity=0.310 Sum_probs=68.0
Q ss_pred cEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCC-Ce
Q 013702 318 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRG-FR 396 (438)
Q Consensus 318 ~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~G-F~ 396 (438)
.+++...++++||++.+.+. .++.++|..++|+|+|||+|+|++|++.+++++++.|++.+.+. ..+..||+|+| |+
T Consensus 12 ~~~~~~~~~~ivG~~~~~~~-~~~~~~i~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~-~~~~nfy~k~~~~~ 89 (102)
T 1r57_A 12 KFYIGDDENNALAEITYRFV-DNNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLKIIASC-SFAKHMLEKEDSYQ 89 (102)
T ss_dssp EEEEESSSTTEEEEEEEEES-SSSEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCEEEESS-HHHHHHHHHCGGGT
T ss_pred EEEEEECCCeEEEEEEEEeC-CCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHcCCCEEEcC-HHHHHHHHhChHHH
Confidence 34444478999999999854 34678999999999999999999999999999999999887665 56789999998 98
Q ss_pred Eece
Q 013702 397 ECSI 400 (438)
Q Consensus 397 ~~g~ 400 (438)
....
T Consensus 90 ~~~~ 93 (102)
T 1r57_A 90 DVYL 93 (102)
T ss_dssp TTBC
T ss_pred HHhh
Confidence 7643
|
| >3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.5e-11 Score=125.06 Aligned_cols=85 Identities=15% Similarity=0.122 Sum_probs=75.0
Q ss_pred eEeeeCHHHHHHHhcCCceEEEcCc-ccCCCCCeeecC---hHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcc
Q 013702 64 EVKKVDVTRMRERLDGGCLVILSNL-GYSSSGEVLNCN---TYEVATACALAIEADKLICIIDGPILD-------ESGHL 132 (438)
Q Consensus 64 ~v~~v~~~~i~~ll~~g~IPVi~~i-~~~~~g~~~nin---aD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~ 132 (438)
.+..++.+.|..+|+.|.|||++++ |.+++|.+.+++ +|++|+.+|.+|+||+++++|||+|++ +++++
T Consensus 147 ~~~~~~~~~l~~~l~~~~v~Vv~Gf~g~~~~g~~~tl~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~ 226 (446)
T 3tvi_A 147 FDEKKSYEKIKEKVLSCNKAVIPGFYGSSFNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKT 226 (446)
T ss_dssp BCHHHHHHHHHHHTTTCSSEECCCSEEECTTSCEEECSSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCB
T ss_pred eehHhhHHHHHHHHhcCCeEEeeCceecCCCCCeEEEccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeE
Confidence 4567789999999999999999995 889999999884 999999999999999999999999873 35899
Q ss_pred cccCCHHHHHHHHHhh
Q 013702 133 IRFLTLQEADSLIRQR 148 (438)
Q Consensus 133 i~~l~~~e~~~l~~~g 148 (438)
|++++++|+.++...|
T Consensus 227 i~~is~~e~~ela~~G 242 (446)
T 3tvi_A 227 ISKISYKELRELSYMG 242 (446)
T ss_dssp CSEEEHHHHHHTTTC-
T ss_pred cceeCHHHHHHHHhCC
Confidence 9999999999985443
|
| >2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase, structural genomics, montreal-K bacterial structural genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia coli} PDB: 2fs5_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=7.1e-10 Score=103.96 Aligned_cols=117 Identities=19% Similarity=0.212 Sum_probs=90.6
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcC-cC-CcCCHH----HHHhhc---------CcEEEEE-ECCEEEEEEEEeeecCCC
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESG-AL-VRRTDE----ELLKAL---------DSFYVVE-REGQIIACAALFPFFKEK 341 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~-~~-~~~~~e----~l~~~~---------~~~~V~~-~dg~iVG~~~l~~~~~~~ 341 (438)
+.||+++++|++.+.+++...+... +. ...+.+ .+..++ ..+++++ .++++||++.+.+.. ..
T Consensus 94 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~g~ivG~~~l~~~~-~~ 172 (235)
T 2ft0_A 94 SGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELN-AT 172 (235)
T ss_dssp CCCEECCGGGHHHHHHHHHHHTTTSTTCTTTSCTTHHHHHHHHHHHHHHTCCTTEEEEEEECTTSCEEEEEEEEECS-SS
T ss_pred ceEEeCCHHhHHHHHHHHHhhHhhccCCCCCCCHHHHHHHHHHHHHHhhccCCCceEEEEECCCCcEEEEEEEEecC-CC
Confidence 4799999999999999998876554 21 111212 222222 3467888 789999999998532 22
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
...++|.| |+|||++|++.+++++++.|++.+.+.+ ..+.+||+|+||+.++..
T Consensus 173 ---~~~i~v~~---g~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~lY~k~GF~~~~~~ 230 (235)
T 2ft0_A 173 ---DARIGLLA---GRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTA 230 (235)
T ss_dssp ---EEEEEEEE---CTTCHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred ---ceEEEEEc---CCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCEEeEEE
Confidence 36788888 9999999999999999999999999887 479999999999987654
|
| >1sqh_A Hypothetical protein CG14615-PA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Drosophila melanogaster} SCOP: d.108.1.5 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.2e-10 Score=110.29 Aligned_cols=112 Identities=15% Similarity=0.149 Sum_probs=84.5
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEE-ECCEEEEEEEEeeecCCCeEEEEEEEECc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVE-REGQIIACAALFPFFKEKCGEVAAIGVSP 352 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~-~dg~iVG~~~l~~~~~~~~~~I~~v~V~p 352 (438)
.+.||+++.+|++.+.+++.. ....+.+.+...+ ..+.++. .++++||++.... .++|..++|+|
T Consensus 173 ~l~lR~l~~~D~~~i~~~~~~------~~~~~~~~i~~~i~~~~~~~i~~~~~g~~VG~~~~~~-----~~~i~~l~V~p 241 (312)
T 1sqh_A 173 EFEIRRLRAEDAAMVHDSWPN------KGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQND-----FSGLGMLQVLP 241 (312)
T ss_dssp TEEEECCCGGGHHHHHHTCTT------CSSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEECT-----TSSEEEEEECG
T ss_pred ceEEEECCHHHHHHHHHHhCc------CCcchHHHHHHHHhcCCcEEEEEecCCCEEEEEEEcC-----CceEEEEEECH
Confidence 368999999999998887532 1122333333322 2333333 4789999997642 24688899999
Q ss_pred cccCCcHHHHHHHHHHHHHH-HCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 353 ECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 353 ~yRgqGiG~~Ll~~l~~~a~-~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
+|||+|||++|++.+++++. +.|+. +.+.+ .+|++||+|+||+..+.
T Consensus 242 ~~rgkGiG~~ll~~l~~~~~~~~g~~-i~l~V~~~N~~A~~lyeklGF~~~g~ 293 (312)
T 1sqh_A 242 KAERRGLGGLLAAAMSREIARGEEIT-LTAWIVATNWRSEALLKRIGYQKDLV 293 (312)
T ss_dssp GGCSSSHHHHHHHHHHHHHHHHSCSC-EEEEEETTCHHHHHHHHHHTCEEEEE
T ss_pred HHcCCCHHHHHHHHHHHHHHHhCCCe-EEEEEeCCCHHHHHHHHHCCCEEeee
Confidence 99999999999999999998 89998 77666 58999999999998765
|
| >1p0h_A Hypothetical protein RV0819; GNAT fold, acetyltransferase, coenzyme A complex, MSHD, TRAN; HET: COA ACO; 1.60A {Mycobacterium tuberculosis} SCOP: d.108.1.1 PDB: 1ozp_A* 2c27_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.3e-09 Score=106.00 Aligned_cols=115 Identities=16% Similarity=0.208 Sum_probs=83.4
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEEC---CEEEEEEEEeeecCCCeEEEEEEEECc
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVERE---GQIIACAALFPFFKEKCGEVAAIGVSP 352 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~d---g~iVG~~~l~~~~~~~~~~I~~v~V~p 352 (438)
+|+++++|++.+.+|+..........+...+ +...+ ..+++++.+ |++||++.+...... ...+..++|+|
T Consensus 10 ~R~~~~~D~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~g~~vG~~~~~~~~~~-~~~~~~l~v~p 87 (318)
T 1p0h_A 10 RSALTADEQRSVRALVTATTAVDGVAPVGEQ-VLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPRGA-GGAMAELVVHP 87 (318)
T ss_dssp BSCCCHHHHHHHHHHHHHHHHHHSSCSSCHH-HHHHTTSSSSEEEEEECSSTTCCEEEEEEEECC----CCCEEEEEECG
T ss_pred ecCCCHHHHHHHHHHHHHHHHhcCCCchhHH-HHHHhhcCCCcEEEEEeCCCCCcEEEEEEEECCCCC-CcEEEEEEECc
Confidence 4699999999999999877643222233333 32333 357888888 999999999854322 22344789999
Q ss_pred cccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 353 ECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 353 ~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
+|||+|+|++|++++++++. ..+.+.+ ..+.+||+++||+..+.
T Consensus 88 ~~rg~Gig~~Ll~~~~~~~~----~~~~~~~~~~~~~a~~~y~~~Gf~~~~~ 135 (318)
T 1p0h_A 88 QSRRRGIGTAMARAALAKTA----GRNQFWAHGTLDPARATASALGLVGVRE 135 (318)
T ss_dssp GGCSSSHHHHHHHHHHHHTT----TCCEEEEGGGCHHHHHHHHHTTCEEEEE
T ss_pred cccCCCHHHHHHHHHHHhhc----CEEEEEEcCCCHHHHHHHHHCCCeeEeE
Confidence 99999999999999998762 3344444 47899999999998763
|
| >1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signalin; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.5e-08 Score=93.50 Aligned_cols=116 Identities=8% Similarity=0.109 Sum_probs=89.0
Q ss_pred ECCccCHHHHHHHHHHHHHcCcCCc------CCHHHHHhhcCcEEEEEECCEEEEEEEEeeec-----------------
Q 013702 282 TAKVTDLSGIKQIIQPLVESGALVR------RTDEELLKALDSFYVVEREGQIIACAALFPFF----------------- 338 (438)
Q Consensus 282 ~at~~D~~~I~~L~~~~~~~~~~~~------~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~----------------- 338 (438)
..+.+++.++.+|....+.+....+ ...+++...-.+++++.+++++|||+.+.+..
T Consensus 13 ~~~~~~~~~~~~LR~~VFv~E~g~~~~~~~~~E~D~~D~~~~~~lv~~~~g~~vGt~Rll~~~~~~~l~~~f~~~~~~~~ 92 (201)
T 1ro5_A 13 EFDKKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHGKE 92 (201)
T ss_dssp GSCHHHHHHHHHHHHHHHTTCSSSCCCEETTEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTTCC
T ss_pred cCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccCCCCCCCEEEEEEeCCeEEEEEecCCCCCCchhhhhhhhhcCCCC
Confidence 3455677788888777765543321 11223333224566677789999999998632
Q ss_pred ---CCCeEEEEEEEECccccC----CcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeE
Q 013702 339 ---KEKCGEVAAIGVSPECRG----QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRE 397 (438)
Q Consensus 339 ---~~~~~~I~~v~V~p~yRg----qGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~ 397 (438)
.+..+++..++|+|+||+ .|+|..|+..++++|++.|++.+++.+ ..+.+||+++||..
T Consensus 93 ~p~~~~~~ei~R~aV~~~~r~~~~~~~v~~~L~~~~~~~a~~~g~~~~~~~a~~~~~~fy~r~G~~~ 159 (201)
T 1ro5_A 93 APCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDV 159 (201)
T ss_dssp CCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEeeeeEECchhhccccchHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCe
Confidence 346789999999999998 799999999999999999999999888 68899999999985
|
| >2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.5e-08 Score=108.59 Aligned_cols=120 Identities=18% Similarity=0.136 Sum_probs=83.7
Q ss_pred eEEEECCccCH----HHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeecC----------
Q 013702 278 EGTRTAKVTDL----SGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFFK---------- 339 (438)
Q Consensus 278 ~~IR~at~~D~----~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~---------- 339 (438)
..+..++.+++ ..+.+++.-+...++. .++.++...+ .++++++.++++||++.+....+
T Consensus 349 ~~~~~~~~~~l~~~e~~L~~~~~Ll~~aHYr--~sp~dL~~llD~p~~~l~va~~~g~IVG~i~v~~eG~l~~~~~~~~~ 426 (671)
T 2zpa_A 349 IVISAFEQTLWQSDPETPLKVYQLLSGAHYR--TSPLDLRRMMDAPGQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVW 426 (671)
T ss_dssp CEEEEEETTHHHHCTHHHHHHHHHHHHHSSS--BCHHHHHHHHHCTTEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHH
T ss_pred ceEEEEcHHHhhcCHHHHHHHHHHHHhcccC--CCHHHHHHHhcCCCceEEEEEECCeEEEEEEEEEcCCcCHHHHHHHH
Confidence 34555555443 3455555555555542 3455555433 46788888999999998853211
Q ss_pred --------------------------CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEE---cHHHHHHH
Q 013702 340 --------------------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL---TTRTADWF 390 (438)
Q Consensus 340 --------------------------~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~---t~~a~~fY 390 (438)
...++|..++|+|+|||+|||++||++++++++ ++..+.+. +..+.+||
T Consensus 427 ~g~rRp~G~lip~~l~~~~~~~e~~~~~~~~I~~IAV~P~~rg~GiG~~LL~~~e~~a~--~~~~l~v~~~~n~~ai~FY 504 (671)
T 2zpa_A 427 AGFRRPRGNLVAQSLAAHGNNPLAATLRGRRVSRIAVHPARQREGTGRQLIAGALQYTQ--DLDYLSVSFGYTGELWRFW 504 (671)
T ss_dssp HTSCCCSSCHHHHHHHHHSSCTTGGGSEEEEEEEEEECTTSCSSSHHHHHHHHHHHTCC--SCSEEEEEEECCHHHHHHH
T ss_pred hcccCCCCcchhHHHHHhhcchhhcccCceEEEEEEECHHHcCCCHHHHHHHHHHHHHh--cCCEEEEEecCCHHHHHHH
Confidence 245789999999999999999999999999873 44444433 36799999
Q ss_pred HHCCCeEecee
Q 013702 391 KSRGFRECSIE 401 (438)
Q Consensus 391 ~k~GF~~~g~~ 401 (438)
+|+||+.+...
T Consensus 505 ek~GF~~v~ig 515 (671)
T 2zpa_A 505 QRCGFVLVRMG 515 (671)
T ss_dssp HHTTCEEEEEC
T ss_pred HHCCCEEEeee
Confidence 99999998643
|
| >3p2h_A AHL synthase; acyl-ACP binding, SAM binding, signaling protein-I MTA complex, signaling protein-inhibitor complex; HET: MTA NOO; 2.00A {Burkholderia glumae} PDB: 3p2f_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=2.1e-07 Score=85.81 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=82.1
Q ss_pred ECCccCHHHHHHHHHHHHHcCcC--Cc-----CCHHHHHhhcCcEEEEEE-CCEEEEEEEEeeec---------------
Q 013702 282 TAKVTDLSGIKQIIQPLVESGAL--VR-----RTDEELLKALDSFYVVER-EGQIIACAALFPFF--------------- 338 (438)
Q Consensus 282 ~at~~D~~~I~~L~~~~~~~~~~--~~-----~~~e~l~~~~~~~~V~~~-dg~iVG~~~l~~~~--------------- 338 (438)
.++.+++.++.+|....+..... .+ ...+++...-.++++..+ ++++||++.+.+..
T Consensus 10 ~l~~~~~~~~~~LR~~VFv~Eqg~~~~~~~~~~E~D~~D~~~~h~lv~~~~~g~~vgt~Rll~~~~~~~l~~~f~~l~~~ 89 (201)
T 3p2h_A 10 RLPAHIAAELGSYRYRVFVEQLGWQLPSEDEKMERDQYDRDDTVYVLGRDANGEICGCARLLPTTRPYLLQEVFPHLLAD 89 (201)
T ss_dssp SCCHHHHHHHHHHHHHHHTTTSCCSCCCCSSCCCCCTTCCTTCEEEEEECTTSCEEEEEEEEETTSCCHHHHTCGGGCSS
T ss_pred cCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccCCCCCCCEEEEEEcCCCeEEEEEEeccccCCccccccChhhcCC
Confidence 45667778888888887655432 21 122233222234555554 58999999998632
Q ss_pred ----CCCeEEEEEEEECccc-cC-C---cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEe
Q 013702 339 ----KEKCGEVAAIGVSPEC-RG-Q---GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 398 (438)
Q Consensus 339 ----~~~~~~I~~v~V~p~y-Rg-q---GiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~ 398 (438)
.+..+++..++|+|+| |+ + +.+..|+..++++++++|++.+++.+ ....+||+++||+..
T Consensus 90 ~~p~~~~~~EisR~aV~~~~rR~~~g~~~~~~~L~~~~~~~a~~~g~~~~~~~aq~~~~~~y~rlG~~~~ 159 (201)
T 3p2h_A 90 EAPRSAHVWELSRFAATPEEGADAGSLAWSVRPMLAAAVECAARRGARQLIGVTFCSMERMFRRIGVHAH 159 (201)
T ss_dssp CCCCCTTEEEEEEEEEC----------CTTHHHHHHHHHHHHHHTTCSEEEEEEEHHHHHHHHHHTCEEE
T ss_pred ccCCCCCEEEEEEEEEcchhcccccccChHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHcCCCeE
Confidence 2578999999999999 64 3 35999999999999999999999888 788999999999964
|
| >3shp_A Putative acetyltransferase STHE_0691; PSI-biology, midwest center for structural genomics, MCSG; HET: SRT; 2.21A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=98.61 E-value=3.7e-08 Score=87.83 Aligned_cols=114 Identities=8% Similarity=0.016 Sum_probs=81.2
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc------------CcEEEEE--ECCEEEEEEEEeeecCC
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL------------DSFYVVE--REGQIIACAALFPFFKE 340 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~------------~~~~V~~--~dg~iVG~~~l~~~~~~ 340 (438)
...+.||+++++|++.+.+++... .+.+.++...++ ...|.+. .++++||++.+. ...
T Consensus 11 ~~rl~LR~~~~~D~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~--~~~ 82 (176)
T 3shp_A 11 GPTVYLRAMVEDDKHHAAAWFDSR------FPVNAARAEAFLKEKLQGDPWDARWHLLAIVRRSDEAVVGSCRIE--FGK 82 (176)
T ss_dssp CSSEEEEECCHHHHHHGGGTCCCS------CCSCSSSCCCCCCGGGGCCGGGCEEEEEEEEETTTCCEEEEEEEE--ECS
T ss_pred cCeEEEeeCCHHHHHHHHHHHhCC------CCCCHHHHHHHHHHHhhcCccccCceEEEEEECCCCcEEEEEEEe--cCC
Confidence 345789999999999888865521 111111111111 1234333 368999999993 345
Q ss_pred CeEEEEEE----EE-CccccCCcHHHHHHHHHHHHHH-HCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 341 KCGEVAAI----GV-SPECRGQGQGDKLLDYIEKKAA-SLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 341 ~~~~I~~v----~V-~p~yRgqGiG~~Ll~~l~~~a~-~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
..++|+ + ++ +|+||| +.+++.+++++. +.++++|.+.+ .+|+++|+|+||+..+..
T Consensus 83 ~~~eig-~~~~~~i~~~~~~G----~ea~~~ll~~af~~~~~~~i~~~v~~~N~~s~~l~ek~GF~~~G~~ 148 (176)
T 3shp_A 83 QTASLR-FHMAPWLDDADVLR----AEALELVVPWLRDEHELLVITVEIAADEQRTLAAAEAAGLKAAVRM 148 (176)
T ss_dssp SEEEEE-EEECTTCSCHHHHH----HHHHHHHHHHHHHHSCCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEE-EeecceecChhHhh----HHHHHHHHHHHHhhCCeEEEEEEEcCCCHHHHHHHHHCCCEEEEEe
Confidence 678884 4 55 899998 888888888885 58999999988 589999999999999854
|
| >1xmt_A Putative acetyltransferase; structural genomics, protein structure initiative, CESG, AT1G77540, center for eukaryotic structural genomics; 1.15A {Arabidopsis thaliana} SCOP: d.108.1.1 PDB: 2q44_A 2evn_A 2il4_A* 2q4y_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=6.2e-08 Score=79.74 Aligned_cols=69 Identities=14% Similarity=0.062 Sum_probs=57.0
Q ss_pred EEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHH-HHHHCC-CeE
Q 013702 328 IIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-WFKSRG-FRE 397 (438)
Q Consensus 328 iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~-fY~k~G-F~~ 397 (438)
.+|++.+....+.+.++|..++|+|+|||+|+|++||+.++++|++.|++.+.+ ++.+.. ||+|+. |..
T Consensus 22 ~vG~i~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l-~~~~~~~f~~k~~~~~~ 92 (103)
T 1xmt_A 22 HEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPS-CSYVSDTFLPRNPSWKP 92 (103)
T ss_dssp SSSEEEEEEETTTTEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTCEEEEC-SHHHHHTHHHHCGGGGG
T ss_pred cEEEEEEEEcCCCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCeEEEE-ehhhhHHHHHhChhHHh
Confidence 478888874433458999999999999999999999999999999999987754 456677 999984 553
|
| >1yle_A Arginine N-succinyltransferase, alpha chain; structural genomics, acyltransferase, arginine metabolism, protein structure initiative; 1.70A {Pseudomonas aeruginosa} SCOP: d.108.1.8 | Back alignment and structure |
|---|
Probab=98.52 E-value=3.7e-07 Score=89.93 Aligned_cols=147 Identities=14% Similarity=0.132 Sum_probs=91.8
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHH-----------hhc-----C-cEEEEEE--CCEEEEEEEEeee
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL-----------KAL-----D-SFYVVER--EGQIIACAALFPF 337 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~-----------~~~-----~-~~~V~~~--dg~iVG~~~l~~~ 337 (438)
|+.|||++.+|.++|.+|....-..-...+.+.+.+. ... . +++|+++ +|++||++.+...
T Consensus 3 M~~IRpa~~~Dl~aL~~La~e~G~G~tsLP~d~e~L~~rI~~S~~sf~~~~~~~~~~~ylfVlED~~~g~VVG~~gI~a~ 82 (342)
T 1yle_A 3 MLVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVAS 82 (342)
T ss_dssp CEEEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESS
T ss_pred ceEEecCCHHHHHHHHHHHHHhCCCcCCCCCCHHHHHHHHHHHHHHHHhhccCCCCceEEEEEEECCCCEEEEEEEEEEe
Confidence 4679999999999999997765211111333333332 111 2 4567775 6999999976532
Q ss_pred -----------------------------------cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH---CCCCEE
Q 013702 338 -----------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS---LGLDML 379 (438)
Q Consensus 338 -----------------------------------~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~---~g~~~l 379 (438)
+-.+..+|+.++|+|+||++|+|+.|.+...-++.+ +-.+++
T Consensus 83 vG~~~PfY~yr~~t~v~~S~~L~v~~~~~~L~L~~d~tg~sEl~tLfl~p~~R~~G~G~lLS~~R~lfiA~~~~rF~~~v 162 (342)
T 1yle_A 83 AGFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAV 162 (342)
T ss_dssp TTSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHHHHHHHCGGGSCSEE
T ss_pred cCCCccceeeeecceeeeccccccccccceEEeecCCCCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHChhhhhhhh
Confidence 014678899999999999999999999998888855 455677
Q ss_pred EEEc------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCC
Q 013702 380 FLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427 (438)
Q Consensus 380 ~l~t------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~ 427 (438)
+.+- ...-.||+.+|=+..+.+ ++ +..|--.-.+|.|+..|+|.
T Consensus 163 ~AEmrG~~De~G~SPFW~~lg~~Ff~md-F~---~AD~lsg~~~k~FIaeLmP~ 212 (342)
T 1yle_A 163 VVEIVGYSDEQGESPFWNAVGRNFFDLN-YI---EAEKLSGLKSRTFLAELMPH 212 (342)
T ss_dssp EEECCBCCCTTCCCHHHHHTGGGTSCCC-HH---HHHHHHHHC----------C
T ss_pred heeccCccCCCCCCccHhHhhcccCCCC-HH---HHHHHhcCCCcchHHHHCCC
Confidence 7765 344689999886655443 11 22333334678888888875
|
| >1bob_A HAT1, histone acetyltransferase; histone modification, acetyl coenzyme A binding-protein; HET: ACO; 2.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=86.31 Aligned_cols=104 Identities=8% Similarity=0.153 Sum_probs=75.7
Q ss_pred ceeEEEECCccCHHHHHHHHHHH------HHcCcCCcCCHHHHHhhcCcEEEEEE-CCEEEEEEEEeeecC---------
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPL------VESGALVRRTDEELLKALDSFYVVER-EGQIIACAALFPFFK--------- 339 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~------~~~~~~~~~~~e~l~~~~~~~~V~~~-dg~iVG~~~l~~~~~--------- 339 (438)
..+.|+.++.+| +.+.+|+... +.+.-..... ++ .....+++++. ++.+|||+.++++..
T Consensus 132 ~~~eI~~a~~~D-~~~~~L~~r~q~~~l~fIE~~~~id~-dd--~~w~~~~v~e~~~~~ivG~~t~y~~~~~~~~~~f~~ 207 (320)
T 1bob_A 132 EEFVVYKSSLVD-DFARRMHRRVQIFSLLFIEAANYIDE-TD--PSWQIYWLLNKKTKELIGFVTTYKYWHYLGAKSFDE 207 (320)
T ss_dssp EEEEEEEECSCS-HHHHHHHHHHTHHHHHHSTTCCCCCT-TC--TTEEEEEEEETTTCCEEEEEEEEEECCC--------
T ss_pred CeEEEEEeccCC-HHHHHHHHHHHHHHHhcccCCcccCc-cC--CCceEEEEEEccCCcEEEEEEEEeeeccCCcccccc
Confidence 347899999999 9999998863 1122111111 11 22345666665 789999999986432
Q ss_pred ----CCeEEEEEEEECccccCCcHHHHHHHHHH-HHHHHCCCCEEEEEc
Q 013702 340 ----EKCGEVAAIGVSPECRGQGQGDKLLDYIE-KKAASLGLDMLFLLT 383 (438)
Q Consensus 340 ----~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~-~~a~~~g~~~l~l~t 383 (438)
.....|..+.|.|.|||+|+|++|++.+. .+++..++..|.+.-
T Consensus 208 ~~~~~~R~rIsq~lVlPpyQgkGiG~~Ll~~i~~~~~~~~~i~~ItVeD 256 (320)
T 1bob_A 208 DIDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEITVED 256 (320)
T ss_dssp -CCCCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEESS
T ss_pred cccCCceEEEEEEEEcHHHhCCCHHHHHHHHHHHHHHhcCCCceEEEEC
Confidence 44778999999999999999999999999 566778888887765
|
| >1kzf_A Acyl-homoserinelactone synthase ESAI; alpha-beta, autoinducer synthase, quorum sensing, bacterial pathogenesis, ligase; 1.80A {Pantoea stewartii subsp} SCOP: d.108.1.3 PDB: 1k4j_A | Back alignment and structure |
|---|
Probab=98.41 E-value=2.1e-07 Score=87.65 Aligned_cols=82 Identities=11% Similarity=0.103 Sum_probs=69.4
Q ss_pred cEEEEEECCEEEEEEEEeeec-------------------CCCeEEEEEEEECccccCCc-------HHHHHHHHHHHHH
Q 013702 318 SFYVVEREGQIIACAALFPFF-------------------KEKCGEVAAIGVSPECRGQG-------QGDKLLDYIEKKA 371 (438)
Q Consensus 318 ~~~V~~~dg~iVG~~~l~~~~-------------------~~~~~~I~~v~V~p~yRgqG-------iG~~Ll~~l~~~a 371 (438)
.++++.+++++||++.+.+.. ... +++..++|+|+ |++| ++..|+..++++|
T Consensus 73 ~hll~~~~g~~Vgt~RLlp~~~~~~l~~~f~~~~~~~~~p~~~-~Ei~R~aV~~~-r~~g~~~~~~~v~~~L~~al~~~a 150 (230)
T 1kzf_A 73 RYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYG-TESSRFFVDKA-RARALLGEHYPISQVLFLAMVNWA 150 (230)
T ss_dssp EEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSC-EEEEEEEECHH-HHHHHHCTTCCHHHHHHHHHHHHH
T ss_pred eEEEEEcCCeEEEEEeecCCCcchhhcCcChhhcCCccCCCCC-eEEEEEEEccc-cccccccchhHHHHHHHHHHHHHH
Confidence 456666799999999998632 123 89999999999 8887 9999999999999
Q ss_pred HHCCCCEEEEEc-HHHHHHHHHCCCeE--ecee
Q 013702 372 ASLGLDMLFLLT-TRTADWFKSRGFRE--CSIE 401 (438)
Q Consensus 372 ~~~g~~~l~l~t-~~a~~fY~k~GF~~--~g~~ 401 (438)
++.|++.+++.+ ..+.+||+|+||.. .+..
T Consensus 151 ~~~G~~~l~~~aq~~~~~fy~r~G~~~~~~G~~ 183 (230)
T 1kzf_A 151 QNNAYGNIYTIVSRAMLKILTRSGWQIKVIKEA 183 (230)
T ss_dssp HHTTCSEEEEEEEHHHHHHHHHHCCCCEEEEEE
T ss_pred HHCCCCEEEEEeCHHHHHHHHHcCCCeEECCCC
Confidence 999999999888 68999999999974 5543
|
| >3dns_A Ribosomal-protein-alanine acetyltransferase; N-terminal domain of ribosomal-protein-alanine acetyltransfe MCSG, PSI; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.03 E-value=3.2e-05 Score=66.31 Aligned_cols=80 Identities=11% Similarity=0.158 Sum_probs=66.9
Q ss_pred EEEEEECCEEEEEEEEeeec-CCCeEEEEEEEECccccCCc---HHHHHHHHHHHHH-HHCCCCEEEEEc--HHHHHHHH
Q 013702 319 FYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQG---QGDKLLDYIEKKA-ASLGLDMLFLLT--TRTADWFK 391 (438)
Q Consensus 319 ~~V~~~dg~iVG~~~l~~~~-~~~~~~I~~v~V~p~yRgqG---iG~~Ll~~l~~~a-~~~g~~~l~l~t--~~a~~fY~ 391 (438)
|.+-..++++||.+.+.... ....+++ .+++.++ |+| +|+..++.+++++ .++++.++.+.+ .++.+.|+
T Consensus 22 fiI~~~~~~~IG~i~i~~Id~~nr~a~i-~I~Igk~--gkG~~~ygtEAl~l~l~y~F~elnlhKi~l~v~~~~ai~~ye 98 (135)
T 3dns_A 22 YLITDKYGITIGRIFIVDLNKDNRFCMF-RMKIYKQ--GKSINTYIKEILSVFMEFLFKSNDINKVNIIVDEEVSTQPFV 98 (135)
T ss_dssp EEEEETTCCEEEEEEEEEEETTTTEEEE-EEEECCC--SSCCHHHHHHHHHHHHHHHHHHSCCSEEEEEEETTSCSHHHH
T ss_pred EEEECCCCCEEEEEEEEEeccccCEEEE-EEEEeeC--CCChHHHHHHHHHHHHHHHHHhcCceEEEEEEecHHHHHHHH
Confidence 44444578999999998765 4567777 7777766 999 9999999999999 679999999888 68999999
Q ss_pred HCCCeEecee
Q 013702 392 SRGFRECSIE 401 (438)
Q Consensus 392 k~GF~~~g~~ 401 (438)
|+||+..|.-
T Consensus 99 KlGF~~EG~l 108 (135)
T 3dns_A 99 ELGFAFEGII 108 (135)
T ss_dssp HTTCEEEEEE
T ss_pred HcCCeEeeee
Confidence 9999999854
|
| >2p0w_A Histone acetyltransferase type B catalytic subuni; HAT1, structural genomics, structural genomics consortium, S transferase; HET: ACO; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.013 Score=57.25 Aligned_cols=57 Identities=12% Similarity=0.264 Sum_probs=46.8
Q ss_pred EEEEEEEEeeec---CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc
Q 013702 327 QIIACAALFPFF---KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT 383 (438)
Q Consensus 327 ~iVG~~~l~~~~---~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t 383 (438)
.++||+.++.+. +.....|.++.|.|.|||+|+|++|++.+.+.+.. ..+..|.++-
T Consensus 200 ~~vGy~T~Y~f~~yp~~~R~RISQ~LILPPyQ~kG~G~~Ll~~iy~~~~~~~~v~eiTVED 260 (324)
T 2p0w_A 200 ATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLLETVHRYYTEFPTVLDITAED 260 (324)
T ss_dssp EEEEEEEEEEEEETTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTCTTBCCBEESS
T ss_pred EEEEEEEEEEeeecCCcccceeEEEEEcCcccccCcHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 589999987653 44577899999999999999999999999999976 4566665544
|
| >4hkf_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase, MEC-17, GNAT, acetyl-COA, GNAT FO transferase; HET: ACO; 1.70A {Danio rerio} PDB: 4h6u_A* 4h6z_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.17 Score=45.54 Aligned_cols=107 Identities=13% Similarity=0.167 Sum_probs=65.5
Q ss_pred CHHHHHHHHHH-----HHHcCcCCcC-CHHHHHhhcCcEEEEEEC------CEEEEEEEEee-----ecC-C-----CeE
Q 013702 287 DLSGIKQIIQP-----LVESGALVRR-TDEELLKALDSFYVVERE------GQIIACAALFP-----FFK-E-----KCG 343 (438)
Q Consensus 287 D~~~I~~L~~~-----~~~~~~~~~~-~~e~l~~~~~~~~V~~~d------g~iVG~~~l~~-----~~~-~-----~~~ 343 (438)
-...+..++.. +...++..+. +.+.+...-+..|+..+. +.++|+.-+-. .+. . ...
T Consensus 36 ~~~~l~~iID~lG~~SA~AQ~L~~piTs~~rl~~~~~~lYll~d~~~~~g~g~viG~LKvG~K~Lf~~d~~g~~~e~~~l 115 (191)
T 4hkf_A 36 PLPQVTTVIDELGKASSKAQQLPAPITSAAKLQANRHHLYLLKDGEQNGGRGVIVGFLKVGYKKLFLLDQRGAHLETEPL 115 (191)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCSSCSCCHHHHHHSCCEEEEEEETTHHHHTCEEEEEEEEEECCEEEECTTCCEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCccCHHHhccCCceEEEEecccccCCCceEEEEEEecCcceEEEcCCCCEEEEecc
Confidence 33556666544 2344455444 455665544566776654 46899876532 111 1 235
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHH-CCCe
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKS-RGFR 396 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k-~GF~ 396 (438)
.|..+||++.+|++|+|++|++++++. .++..+.+.. .....|..| +|+.
T Consensus 116 cIlDFyV~es~QR~G~Gk~lfe~mL~~---e~i~p~rvA~DnPS~k~l~Fl~Khy~l~ 170 (191)
T 4hkf_A 116 CVLDFYVTETLQRHGYGSELFDFMLKH---KQVEPAQMAYDRPSPKFLSFLEKRYDLR 170 (191)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHH---HTCCGGGSEEESCCHHHHHHHHHHHCCC
T ss_pred EEEeEEEeeeeeccCHHHHHHHHHHHh---cCCcceeeecCCchHHHHHHHHhccCcc
Confidence 677899999999999999999988644 3444332222 355677766 4664
|
| >3iwg_A Acetyltransferase, GNAT family; structural genomics, APC, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.30A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.057 Score=51.49 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=58.4
Q ss_pred ceeEEEECC-ccCHHHHHHHHHHHHHcCcCCcCCHHHHHh---hcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEEC
Q 013702 276 LYEGTRTAK-VTDLSGIKQIIQPLVESGALVRRTDEELLK---ALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 351 (438)
Q Consensus 276 ~~~~IR~at-~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~---~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~ 351 (438)
.|+.|.+++ .+|+..+.+. +..+-.. |. ...+.. ....+|.+++++++||++.++ .+ + .+-.++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~l-d~~~~~~~~~~~~~~~~~~~~~~~G~~~v~--~~-~--~~~~~~~~ 72 (276)
T 3iwg_A 3 AMFKIKTIESLSDLTQLKKA---YFDSSIV-PL-DGMWHFGFAPMAKHFGFYVNKNLVGFCCVN--DD-G--YLLQYYLQ 72 (276)
T ss_dssp --CEEEECCCGGGGHHHHHH---HHHHCSS-CC-CHHHHHTTGGGSEEEEEEETTEEEEEEEEC--TT-S--EEEEEEEC
T ss_pred cceEEEEcCchHHHHHHHHH---HHHhcCC-Cc-hhhHhcCccccceEEEEEECCEEEEEEEEc--CC-c--eeeEEEec
Confidence 456777776 4455544444 4333211 11 122222 236789999999999999997 22 2 45599999
Q ss_pred ccccCCcHHHHHHHHHHHHHHHC-----CCCEEEEEc
Q 013702 352 PECRGQGQGDKLLDYIEKKAASL-----GLDMLFLLT 383 (438)
Q Consensus 352 p~yRgqGiG~~Ll~~l~~~a~~~-----g~~~l~l~t 383 (438)
|+||.+| +.|+..+. ++. +++.++..+
T Consensus 73 ~~~~~~~--~~lf~~~~---~~~~~~~~~i~~~f~~~ 104 (276)
T 3iwg_A 73 PEFQLCS--QELFTLIS---QQNSSVIGEVKGAFVST 104 (276)
T ss_dssp GGGHHHH--HHHHHHHH---TTCCTTTCCCCEEEEET
T ss_pred HHHHhhH--HHHHHHHH---hcCCccceecCccccCc
Confidence 9999876 66654333 556 788888765
|
| >3ddd_A Putative acetyltransferase; NP_142035.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: COA; 2.25A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=94.28 E-value=0.11 Score=49.02 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=65.6
Q ss_pred EEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcccc
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 355 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yR 355 (438)
.+++++..| +.+.++....+... + ...+..++ ..+.++ ++ +||+.+.+ ..++.++. +
T Consensus 160 ~v~~~~~~d-~~l~~~d~~~~~~~----r-~~~l~~~~~~~~~~~~~--~~--~Gy~~~r~------~~igp~~a----~ 219 (288)
T 3ddd_A 160 GVVEVNKIP-NWVKEIDKKAFGDD----R-IRVLEAYMRRGARLLCA--EN--EGFGLVYR------GKIGPLVA----D 219 (288)
T ss_dssp SEEEESSCC-HHHHHHHHHHHSSC----C-HHHHHHHHHTTCEEEEE--TT--TEEEEEET------TEEEEEEE----S
T ss_pred ceeEcccCc-HHHHHHhHHhCCcc----H-HHHHHHHHcCCCcEEEE--cC--ceEEEEee------cccccccc----C
Confidence 589999999 99998866554332 1 12223332 334444 44 99998774 34555543 7
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
+.++++.|+..+... |. +.+.+ ..+..||+++||+.+..
T Consensus 220 ~~~~a~~Ll~~l~~~----g~--~~ldv~~~n~~a~~l~~~~Gf~~~~~ 262 (288)
T 3ddd_A 220 SPRVAEKILLKAFQL----GA--REIIIPEVNKDALELIKIFKPSQVTS 262 (288)
T ss_dssp SHHHHHHHHHHHHHT----TC--CEEEEETTCHHHHHHHGGGCCEEEEE
T ss_pred CHHHHHHHHHHHHhC----CC--EEEEecCCCHHHHHHHHHcCCeEeee
Confidence 889999999999877 54 55555 35799999999998764
|
| >3gkr_A FEMX; FEMX, peptidoglycan, hexapeptide, transferase, transferase- transferase product complex; HET: UMA; 1.60A {Lactobacillus viridescens} PDB: 1ne9_A 1p4n_A* 1xix_A 1xf8_A 1xe4_A | Back alignment and structure |
|---|
Probab=93.30 E-value=1.3 Score=43.10 Aligned_cols=107 Identities=14% Similarity=0.089 Sum_probs=74.5
Q ss_pred ccCHHHHHHHHHHHHHcCcCCcCCHHHHHhh---c--C--cEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCC
Q 013702 285 VTDLSGIKQIIQPLVESGALVRRTDEELLKA---L--D--SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 357 (438)
Q Consensus 285 ~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~---~--~--~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgq 357 (438)
.+|++.+.+++.......-....+.+-+... + . .++++..+|++||.+.+... ++.++....+.+++ +..
T Consensus 190 ~~~l~~F~~l~~~t~~r~g~~~~~~~~f~~l~~~~~~~~~~l~~a~~~g~~vA~~l~~~~--~~~~~~~~~g~~~~-~~~ 266 (336)
T 3gkr_A 190 ATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAEREGKLLSTGIALKY--GRKIWYMYAGSMDG-NTY 266 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHSCTTTEEEEEEEETTEEEEEEEEEEE--TTEEEEEEEEECSS-CCT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhcCcCcEEEEEEEECCEEEEEEEEEEE--CCEEEEEeeeECch-hcc
Confidence 4567777777766543322223454443332 2 1 46778899999998877633 45666667888999 888
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEc-------HHHHHHHHHCC
Q 013702 358 GQGDKLLDYIEKKAASLGLDMLFLLT-------TRTADWFKSRG 394 (438)
Q Consensus 358 GiG~~Ll~~l~~~a~~~g~~~l~l~t-------~~a~~fY~k~G 394 (438)
+-+..|+-.++++|.++|++..-+.- ....+|-+++|
T Consensus 267 ~~~~ll~~~~i~~a~~~G~~~~Dfgg~~~~~~~~Gl~~FK~~Fg 310 (336)
T 3gkr_A 267 YAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFV 310 (336)
T ss_dssp THHHHHHHHHHHHHHHTTCSEEEEEECSCSSTTCHHHHHHHHHC
T ss_pred ChhHHHHHHHHHHHHHCCCCEEECcCCCCCCCCccHHHHhhcCC
Confidence 99999999999999999999876544 14566666666
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=93.29 E-value=0.72 Score=46.11 Aligned_cols=116 Identities=16% Similarity=0.177 Sum_probs=85.3
Q ss_pred EEEECCccCHHHHHHHHHHHHHcC-cCCcCCHHHHHhhcC------cEEEEEECCEEEEEEEEeeecCC----------C
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFKE----------K 341 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~~~------~~~V~~~dg~iVG~~~l~~~~~~----------~ 341 (438)
.+|++++.|++++.+|++.+...- .....+.+++.+|+- ..||++.+++|-.|++++..+.. +
T Consensus 263 glR~m~~~Dvp~v~~LL~~yl~~f~la~~ft~eev~Hw~lp~~~Vi~tYVvE~~g~ITDf~SFY~Lpstvi~~~~~~~l~ 342 (421)
T 2wuu_A 263 GLREMKPSDVPQVRRILMNYLDNFDVGPVFSDAEISHYLLPRDGVVFTYVVENDKKVTDFFSFYRIPSTVIGNSNYNILN 342 (421)
T ss_dssp TEEECCGGGHHHHHHHHHHHHTTSSBEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEEEEEEEC------CEE
T ss_pred CcccCchhhHHHHHHHHHHHHHhCCceeeCCHHHHHHhccCcCCceEEEEEeCCCcEeeEEEEEEcceeecCCCcchhhh
Confidence 499999999999999998876543 335678899998873 36888889999999999854321 3
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
.+++ ..++...- -=.+||+.++-.|++.|+.-..+.. -....|.+.+.|-.-.
T Consensus 343 aAY~-fY~~~t~~----~l~~Lm~DaLi~Ak~~gfDVfNaL~~mdN~~fL~~lKFg~Gd 396 (421)
T 2wuu_A 343 AAYV-HYYAATSM----PLHQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGD 396 (421)
T ss_dssp EEEE-EEEEESSS----CHHHHHHHHHHHHHHTTCCEEEEESCTTGGGGTTTTTCEEEE
T ss_pred hhhh-hhhccCCc----cHHHHHHHHHHHHHHcCCcEEecccccccHHHHHhCCCCCCC
Confidence 3444 22333222 2467999999999999998776666 3456788999999754
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=93.12 E-value=0.4 Score=47.75 Aligned_cols=116 Identities=18% Similarity=0.196 Sum_probs=84.2
Q ss_pred EEEECCccCHHHHHHHHHHHHHcC-cCCcCCHHHHHhhcC------cEEEEEECCEEEEEEEEeeecC-----C-----C
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFK-----E-----K 341 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~~~------~~~V~~~dg~iVG~~~l~~~~~-----~-----~ 341 (438)
.+|++++.|++++.+|++.....- .....+.+++.+|+- ..+|+++++++.+|++++..+. . .
T Consensus 227 glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~f~~ee~~Hw~lp~~~Vi~syVve~~~~itdf~SFY~lps~vi~~~k~~~l~ 306 (385)
T 4b14_A 227 NMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTLN 306 (385)
T ss_dssp TCEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCBTTTEEEEEEEETTEEEEEEEEEECCEEESSCSSCSEEC
T ss_pred ccccCcHhhHHHHHHHHHHHHhcCCeeEecCHHHeeeeeecCCCeEEEEEECCCCcEeEEEEEEEcceeeeCCCCcceee
Confidence 489999999999999998876543 235568899988872 4688899999999999975431 1 3
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
.+++... +.-. ---.+||+.++-.|++.|+.-..+.. -....|.+++.|..-.
T Consensus 307 ~AY~fY~-~~~~----~~l~~l~~dali~ak~~~fDVfnaL~~~~N~~fl~~lkF~~Gd 360 (385)
T 4b14_A 307 AAYSFYN-VTTT----ATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGD 360 (385)
T ss_dssp EEEECCC-EESS----SCHHHHHHHHHHHHHHTTCSEEEEESCTTGGGGTTTTTCEEEE
T ss_pred eEeEEEe-eecC----ccHHHHHHHHHHHHHHCCCCEEEeccccchHHHHHHcCCCCCC
Confidence 4444222 2211 12357999999999999998776666 3446799999998754
|
| >4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* | Back alignment and structure |
|---|
Probab=92.26 E-value=1.4 Score=43.90 Aligned_cols=100 Identities=19% Similarity=0.107 Sum_probs=66.5
Q ss_pred EEEECCccCHHHHHHHH---HHHHHcC----cCCcCCHHHHHhhcC------c-EEEEE--ECCEEEEEEEEeeec----
Q 013702 279 GTRTAKVTDLSGIKQII---QPLVESG----ALVRRTDEELLKALD------S-FYVVE--REGQIIACAALFPFF---- 338 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~---~~~~~~~----~~~~~~~e~l~~~~~------~-~~V~~--~dg~iVG~~~l~~~~---- 338 (438)
....++.+|-..+.+++ ...+-+. +....+.+-+.-.+. . ...+. .++++|||+...|..
T Consensus 47 ~W~~~d~~~~~~l~evy~lL~~nYVED~d~~FRf~YS~efL~WaL~~Pg~~~~whiGVR~~~~~kLVgfIsaiP~~irv~ 126 (385)
T 4b14_A 47 SWYVCDVKDEKDRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIH 126 (385)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCCTTCCGGGEEEEEETTTTEEEEEEEEEEEEEEET
T ss_pred EEEecCCCCHHHHHHHHHHHHhhccCCCcceEeccCCHHHHhhhhcCCCCCcceEEEEEEccCCeEEEEEeeeEEEEEEe
Confidence 56666666655555554 4432221 113345555433331 1 22332 368999999987632
Q ss_pred C--CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 339 K--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 339 ~--~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
+ -...+|..+|||+.+|+|+++-.|++++.+.+...|+-.
T Consensus 127 ~~~~~~~eINFLCVHKklRsKrlAPvLIkEitRR~n~~gI~q 168 (385)
T 4b14_A 127 KRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQ 168 (385)
T ss_dssp TEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTTCCE
T ss_pred ceEeeeEEEEEEEEehhHhccCccHHHHHHHHHHhhccCceE
Confidence 1 267899999999999999999999999999999888765
|
| >1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* | Back alignment and structure |
|---|
Probab=91.86 E-value=1.3 Score=44.34 Aligned_cols=121 Identities=17% Similarity=0.143 Sum_probs=86.3
Q ss_pred EEEECCccCHHHHHHHHHHHHHcC-cCCcCCHHHHHhhc----C--------cEEEEE-ECCEEEEEEEEeeecCC----
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL----D--------SFYVVE-REGQIIACAALFPFFKE---- 340 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~~----~--------~~~V~~-~dg~iVG~~~l~~~~~~---- 340 (438)
.+|++++.|++++.+|++.+...- +....+.+++.+|+ . ..||++ ++++|-.|++++..+..
T Consensus 227 glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~ft~eev~Hwflp~~~~~~~~~Vi~tYVvE~~~g~ITDf~SFY~Lpstv~~~ 306 (422)
T 1iic_A 227 GLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNN 306 (422)
T ss_dssp TEEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCCTTCCGGGCCEEEEEEECTTSCEEEEEEEEECCEEECSC
T ss_pred CcccCchhhHHHHHHHHHHHHHhCCCeeeCCHHHHHHHccCCCCCCCCCceEEEEEEECCCCcEeeEEEEEEccccccCC
Confidence 499999999999999999876543 33567889998887 2 267777 57899999999853321
Q ss_pred ------CeEEEEEEEECccccC--Cc----------HHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 341 ------KCGEVAAIGVSPECRG--QG----------QGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 341 ------~~~~I~~v~V~p~yRg--qG----------iG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
..+++...+-...+.. .+ -=.+||+.++-.|++.|+.-..+.. -....|.+.+.|-.-.
T Consensus 307 ~kh~~l~aAY~fY~~~t~~~~~~~~~~~~~~~~l~~~l~~Lm~DaLi~Ak~~~fDVFNaL~~mdN~~fL~~lKFg~Gd 384 (422)
T 1iic_A 307 TKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGD 384 (422)
T ss_dssp SSCSEECEEEEEEEEECTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred CccchhhhhhhhhheecccccccccccchhhhhhhhhHHHHHHHHHHHHHHcCCCEEecccccccHHHHHhCCCCCCC
Confidence 4566644444433211 11 2457888999999999998877666 3456788999998754
|
| >3to7_A Histone acetyltransferase ESA1; MYST family; HET: ALY COA; 1.90A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 3to6_A* 1fy7_A* 1mja_A* 1mjb_A* 3to9_A* 1mj9_A* | Back alignment and structure |
|---|
Probab=91.84 E-value=0.33 Score=45.86 Aligned_cols=105 Identities=17% Similarity=0.146 Sum_probs=63.2
Q ss_pred CCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC--cEEEEE-ECC---EEEEEEEEeeecCC
Q 013702 267 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVVE-REG---QIIACAALFPFFKE 340 (438)
Q Consensus 267 g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~--~~~V~~-~dg---~iVG~~~l~~~~~~ 340 (438)
..|..|.++..+.+..++=..-....+-+- +...-|+...+ +.-++. .|||.. .|+ .+|||-+=... ..
T Consensus 64 PPG~eIYR~~~~svfEVDG~~~k~yCQnLc-LlaKLFLdhKt---lyyDV~~F~FYVl~e~d~~g~h~vGyFSKEK~-s~ 138 (276)
T 3to7_A 64 PPGNEIYRDDYVSFFEIDGRKQRTWCRNLC-LLSKLFLDHKT---LYYDVDPFLFYCMTRRDELGHHLVGYFSKEKE-SA 138 (276)
T ss_dssp CSSEEEEECSSEEEEEEEGGGSHHHHHHHH-HHHHTTCSCCS---CTTCCTTEEEEEEEEEETTEEEEEEEEEEESS-CT
T ss_pred CCCceEEECCCEEEEEEeCCcchHHHHHHH-HHHHHhhccce---eeeeCCCeEEEEEEEeCCCCceeccccccccc-cc
Confidence 458888888777777766444332222211 12222221100 111222 244443 332 57887766532 33
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCC
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~ 376 (438)
+..-+.++.|.|.||++|+|+.|++.--...+..|.
T Consensus 139 ~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 174 (276)
T 3to7_A 139 DGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENK 174 (276)
T ss_dssp TCEEESCEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEEecChHHcCCccceeehheeeeeeccCC
Confidence 456799999999999999999999999888877653
|
| >1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A | Back alignment and structure |
|---|
Probab=91.77 E-value=1.4 Score=43.80 Aligned_cols=121 Identities=17% Similarity=0.167 Sum_probs=85.1
Q ss_pred EEEECCccCHHHHHHHHHHHHHcC-cCCcCCHHHHHhhc----C-------cEEEEE-ECCEEEEEEEEeeecCC-----
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL----D-------SFYVVE-REGQIIACAALFPFFKE----- 340 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~~----~-------~~~V~~-~dg~iVG~~~l~~~~~~----- 340 (438)
.+|++++.|++++.+|++.+...- .....+.+++.+|+ + ..||++ ++++|-.|++++..+..
T Consensus 207 glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~f~~eev~Hw~lp~~~~~~~~Vi~tYVve~~~g~ITDf~SFY~Lpstv~~~~ 286 (392)
T 1iyk_A 207 GLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNA 286 (392)
T ss_dssp TEEECCGGGHHHHHHHHHHHHTTSSEEEECCHHHHHHHHHCSCSSSCCSSEEEEEEECTTSCEEEEEEEEECCEEESSCS
T ss_pred CcccCchhhHHHHHHHHHHHHHhCCceeeCCHHHHHHHcccCCCCCCCceEEEEEEECCCCcEeeEEEEEECcccccCCC
Confidence 499999999999999999876543 33567888988887 2 367777 57899999999853321
Q ss_pred -----CeEEEEEEEECccccCC--cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 341 -----KCGEVAAIGVSPECRGQ--GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 341 -----~~~~I~~v~V~p~yRgq--GiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
..+++...+-..-+... --=.+||+.++-.|++.|+.-..+.. -....|.+.+.|-.-.
T Consensus 287 ~~~~l~aAY~fY~~~~~~~~~~l~~~l~~Lm~DaLi~Ak~~~fDVFNaL~~mdN~~fL~~lKFg~Gd 353 (392)
T 1iyk_A 287 QHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGD 353 (392)
T ss_dssp SCSEECEEEEEEEEETTTTSTTHHHHHHHHHHHHHHHHGGGTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred ccchhhhhhhhhccccccccccccchHHHHHHHHHHHHHHcCCcEEecccccccHHHHHHCCCCCCC
Confidence 45666433333222111 02456888888889999998877666 3455788999999754
|
| >2ozu_A Histone acetyltransferase MYST3; structural genomics, structural G consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} SCOP: d.108.1.1 PDB: 2rc4_A* 1m36_A | Back alignment and structure |
|---|
Probab=91.52 E-value=0.45 Score=45.12 Aligned_cols=105 Identities=14% Similarity=0.110 Sum_probs=61.0
Q ss_pred CCCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC--cEEEEEE-C---CEEEEEEEEeeecC
Q 013702 266 DGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVVER-E---GQIIACAALFPFFK 339 (438)
Q Consensus 266 ~g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~--~~~V~~~-d---g~iVG~~~l~~~~~ 339 (438)
...|..|.++..+.+-.++=..-....+-+- +...-|+... .+.-++. .|||..+ | -.+|||-+-.. ..
T Consensus 68 hPPG~eIYR~~~~svfEVDG~~~k~yCQnLC-LlaKLFLdhK---tlyyDV~~FlFYVl~~~d~~g~h~vGYFSKEK-~s 142 (284)
T 2ozu_A 68 HPPANEIYRKNNISVFEVDGNVSTIYCQNLC-LLAKLFLDHK---TLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEK-HC 142 (284)
T ss_dssp SCSSEEEEEETTEEEEEEETTTSHHHHHHHH-HHHHTTCSCC---CCTTCCTTEEEEEEEEEETTEEEEEEEEEEES-SC
T ss_pred CCCCceeEEeCCEEEEEEeCcccHHHHHHHH-HHHHHhhccc---eeeeccCceEEEEEEEecCCCceEEEeeeecc-cc
Confidence 3457777777666666665443332222211 1112122110 0111222 2455443 3 25888765442 23
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 375 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g 375 (438)
....-+.++.|.|.||++|+|+.|++..-...+..|
T Consensus 143 ~~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg 178 (284)
T 2ozu_A 143 QQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREG 178 (284)
T ss_dssp TTCEEESEEEECGGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred cccCcEEEEEecChhHhccHhHHHHHHHHHHhhhcC
Confidence 345779999999999999999999999999888766
|
| >3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* | Back alignment and structure |
|---|
Probab=91.40 E-value=0.76 Score=45.53 Aligned_cols=101 Identities=16% Similarity=0.126 Sum_probs=66.4
Q ss_pred eEEEECCccCHHHHHH---HHHHHHHcC----cCCcCCHHHHHhhcC------cE-EEEE--ECCEEEEEEEEeeec---
Q 013702 278 EGTRTAKVTDLSGIKQ---IIQPLVESG----ALVRRTDEELLKALD------SF-YVVE--REGQIIACAALFPFF--- 338 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~---L~~~~~~~~----~~~~~~~e~l~~~~~------~~-~V~~--~dg~iVG~~~l~~~~--- 338 (438)
+....+..+|-..+.+ |+...+-+. +....+.+-+.-.+. .+ ..+. ..+++|||++..|..
T Consensus 43 FeW~~~dl~~~~~l~ely~lL~~nYVEDdd~~FRF~YS~efL~WaL~pPg~~~~whvGVR~~~s~kLVgfIsaiP~~irv 122 (383)
T 3iu1_A 43 FTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHI 122 (383)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHSCBCTTSCEEECCCHHHHHHHHSSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEE
T ss_pred CEEEecCCCCHHHHHHHHHHHHhccccCCcceEEeeCCHHHHHHhccCCCCCcceEEEEEEccCCeEEEEEecceEEEEE
Confidence 3455665555554444 444433221 224455555543331 12 2232 378999999976631
Q ss_pred -C--CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 339 -K--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 339 -~--~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
+ -...+|..+|||+.+|+++++--|++++.+.+...|+-.
T Consensus 123 ~~~~~~~~eINFLCVhKkLRsKrLAPvLIkEITRRvn~~gI~q 165 (383)
T 3iu1_A 123 YDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQ 165 (383)
T ss_dssp TTEEEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTTCCC
T ss_pred cceEeeeeEEEEEEEcHhHHhCCCcHHHHHHHHHHhhhcchhh
Confidence 1 257899999999999999999999999999999888743
|
| >4b5o_A Alpha-tubulin N-acetyltransferase; microtubules, cilium, intraflagellar transport; HET: ACO; 1.05A {Homo sapiens} PDB: 4b5p_A* | Back alignment and structure |
|---|
Probab=91.33 E-value=1.2 Score=40.18 Aligned_cols=97 Identities=11% Similarity=0.175 Sum_probs=56.9
Q ss_pred HHcCcCCcC-CHHHHHhhcCcEEEEEEC-------CEEEEEEEEee-----ec-CC-----CeEEEEEEEECccccCCcH
Q 013702 299 VESGALVRR-TDEELLKALDSFYVVERE-------GQIIACAALFP-----FF-KE-----KCGEVAAIGVSPECRGQGQ 359 (438)
Q Consensus 299 ~~~~~~~~~-~~e~l~~~~~~~~V~~~d-------g~iVG~~~l~~-----~~-~~-----~~~~I~~v~V~p~yRgqGi 359 (438)
...++..+. +.+.+...-+..|+..+. +.++|+.-+.. ++ .. ....+-.+||++.+|++|+
T Consensus 60 ~AQgL~~~ITs~~kl~~~d~~lYll~d~~~~~~~~~~v~G~LKvG~K~Lfl~d~~g~~~e~~~lCvLDFYVhEs~QR~G~ 139 (200)
T 4b5o_A 60 KAQNLSAPITSASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHNEVEPLCILDFYIHESVQRHGH 139 (200)
T ss_dssp HHTTCSSCSCCHHHHHHSCCEEEEEECTTCCCC----EEEEEEEEECCEEEECTTCCEEEECCEEEEEEEECGGGTTSSH
T ss_pred HHcCCCCCccCHHHhccCCcEEEEEeecccccCCCceEEEEEEEeeeeeEEECCCCCEEEeecceEEEEEechhhhhcCc
Confidence 444555554 556665554566666542 36888874321 12 12 2233558999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHH-CCCe
Q 013702 360 GDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS-RGFR 396 (438)
Q Consensus 360 G~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k-~GF~ 396 (438)
|++|++++++.-. .....+...- ..-..|..| +|-+
T Consensus 140 Gk~LF~~ML~~e~-~~p~~la~DrPS~Kll~FL~KhY~L~ 178 (200)
T 4b5o_A 140 GRELFQYMLQKER-VEPHQLAIDRPSQKLLKFLNKHYNLE 178 (200)
T ss_dssp HHHHHHHHHHHHT-CCGGGCEEESCCHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcC-CChhhccccCCCHHHHHHHHHhcCCC
Confidence 9999999996542 1222333333 455677766 3443
|
| >2ou2_A Histone acetyltransferase htatip; structural genomics, structural genomics consortium, SGC; HET: ALY ACO; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.18 E-value=0.34 Score=46.02 Aligned_cols=105 Identities=17% Similarity=0.117 Sum_probs=62.1
Q ss_pred CCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC--cEEEEEE-CC---EEEEEEEEeeecCC
Q 013702 267 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVVER-EG---QIIACAALFPFFKE 340 (438)
Q Consensus 267 g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~--~~~V~~~-dg---~iVG~~~l~~~~~~ 340 (438)
..|+.|.++..+.+-.++=..-....+-+- +...-|+..- .+.-++. .|||..+ |+ .+|||-+-... ..
T Consensus 62 PPG~eIYr~~~~svfEVDG~~~k~yCQnLc-LlaKLFLdhK---tlyyDV~~FlFYVl~e~D~~g~h~vGYFSKEK~-s~ 136 (280)
T 2ou2_A 62 PPGNEIYRKGTISFFEIDGRKNKSYSQNLC-LLAKCFLDHK---TLYYDTDPFLFYVMTEYDCKGFHIVGYFSKEKE-ST 136 (280)
T ss_dssp CSSEEEEEETTEEEEEEETTTSHHHHHHHH-HHHHTTCSCC---TTTTCCTTEEEEEEEEEETTEEEEEEEEEEESS-CT
T ss_pred CCccEEEEcCCEEEEEEeCccchHHHHHHH-HHHHHhhccc---eeeeecCceEEEEEEEecCCCcEEEEEeecccc-Cc
Confidence 457888887776776666444332222111 1122122110 1111222 2444433 32 58887765532 33
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCC
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~ 376 (438)
+..-+.++.|.|.||++|+|+.|++.--...+..|.
T Consensus 137 ~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 172 (280)
T 2ou2_A 137 EDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGK 172 (280)
T ss_dssp TCEEESCEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred cccceEEEEecchHHhcchhHHHHHHHHHHHHhhCc
Confidence 457799999999999999999999999888876654
|
| >4h6u_A Alpha-tubulin N-acetyltransferase; tubulin acetyltransferase; HET: ACO; 2.45A {Danio rerio} PDB: 4h6z_A* | Back alignment and structure |
|---|
Probab=90.49 E-value=1.3 Score=39.91 Aligned_cols=74 Identities=16% Similarity=0.204 Sum_probs=45.2
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHH-CCCeEeceeccchHhhhhhcCCCCceEE
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS-RGFRECSIEMIPEERRKRINLSRNSKYY 420 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k-~GF~~~g~~~lp~~~~~~y~~~r~s~~~ 420 (438)
.+-.+||++.+|++|+|++|++++++.-. .....+...- ..-..|..| +|-.. |-+|.|..+.
T Consensus 118 CvLDFYVhEs~QR~G~Gk~LF~~ML~~e~-~~p~~la~DrPS~Kll~FL~KhY~L~~-------------~ipQ~NnFVV 183 (200)
T 4h6u_A 118 CVLAFYVTETLQRHGYGSELFDFMLKHKQ-VEPAQMAYDRPSPKFLSFLEKRYDLRN-------------SVPQVNNFVV 183 (200)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHT-CCGGGSEEESCCHHHHHHHHHHSCCCC-------------BCCCSSSEEC
T ss_pred eeeeeeeehhhcccCcHHHHHHHHHHHcC-CChhHccccCCCHHHHHHHHHhcCCCc-------------cCCcCccEEE
Confidence 35599999999999999999999996542 1222333333 456777766 45443 3456666666
Q ss_pred EEccCCCCCCC
Q 013702 421 MKKLLPDTSGI 431 (438)
Q Consensus 421 ~k~ll~~~~g~ 431 (438)
....+.+.++.
T Consensus 184 f~~fF~~~~~~ 194 (200)
T 4h6u_A 184 FAGFFQSRSGT 194 (200)
T ss_dssp BGGGC------
T ss_pred ehHHhcCCCCC
Confidence 66666655543
|
| >2pq8_A Probable histone acetyltransferase MYST1; MOF, structural genomics, structural genomics consortium, SGC; HET: COA; 1.45A {Homo sapiens} PDB: 2giv_A* 3qah_A* 2y0m_A* 3toa_A* 3tob_A* | Back alignment and structure |
|---|
Probab=90.19 E-value=0.66 Score=43.96 Aligned_cols=106 Identities=15% Similarity=0.105 Sum_probs=62.8
Q ss_pred CCCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC--cEEEEE-ECC---EEEEEEEEeeecC
Q 013702 266 DGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVVE-REG---QIIACAALFPFFK 339 (438)
Q Consensus 266 ~g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~--~~~V~~-~dg---~iVG~~~l~~~~~ 339 (438)
...|+.|.++..+.+-.++=..-....+-+- +...-|+.. ..+.-+++ .|||.. .|+ .+|||-+=.. ..
T Consensus 63 ~PPG~eIYr~~~~svfEVDG~~~k~yCqnLc-LlaKLFLdh---KtlyyDV~~FlFYVl~e~d~~g~h~vGYFSKEK-~s 137 (278)
T 2pq8_A 63 QPPGKEIYRKSNISVHEVDGKDHKIYCQNLC-LLAKLFLDH---RTLYFDVEPFVFYILTEVDRQGAHIVGYFSKEK-ES 137 (278)
T ss_dssp SCSSEEEEEETTEEEEEEETTTCHHHHHHHH-HHHHTTCCC---GGGGSCSTTEEEEEEEEEETTEEEEEEEEEEET-TC
T ss_pred CCCCCEEEEcCCEEEEEEeCccchHHHHHHH-HHHHHhhhc---ceeeeccCceEEEEEEEecCCCceEEEEeeccc-cc
Confidence 4468888887777776665444332222111 111112211 11112222 244443 332 5788766543 23
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCC
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~ 376 (438)
.+..-+.++.|.|.||++|+|+.|++.--...+..|.
T Consensus 138 ~~~~NLaCIltlP~yQrkGyG~lLI~fSYeLSr~Eg~ 174 (278)
T 2pq8_A 138 PDGNNVACILTLPPYQRRGYGKFLIAFSYELSKLEST 174 (278)
T ss_dssp TTCEEESCEEECGGGCSSSHHHHHHHHHHHHHHHTTC
T ss_pred cccCceEEEEecChhhccchhHHHHHHHHHHHhhcCc
Confidence 3457799999999999999999999999888886653
|
| >3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* | Back alignment and structure |
|---|
Probab=90.11 E-value=1 Score=44.54 Aligned_cols=116 Identities=16% Similarity=0.182 Sum_probs=82.8
Q ss_pred EEEECCccCHHHHHHHHHHHHHcC-cCCcCCHHHHHhhcC------cEEEEEE-CCEEEEEEEEeeecC-----C-----
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALD------SFYVVER-EGQIIACAALFPFFK-----E----- 340 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~~~------~~~V~~~-dg~iVG~~~l~~~~~-----~----- 340 (438)
.+|++++.|++++.+|++.+...- +....+.+++.+|+- ..||++. +|+|-.|++++..+. .
T Consensus 224 glR~m~~~Dv~~v~~Ll~~yl~~f~l~~~ft~eev~Hw~lp~~~Vi~syVve~~~g~ITDf~SFY~Lpstvl~~~~~~~l 303 (383)
T 3iu1_A 224 GLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSL 303 (383)
T ss_dssp TEEECCGGGHHHHHHHHHHHGGGSSEEEECCHHHHHHHHSCC-CCEEEEEEECTTSCEEEEEEEEECCEEETTCSSCCEE
T ss_pred CcccCchhhHHHHHHHHHHHHHhCCCeeeCCHHHhhhhcccCCCeEEEEEEECCCCcEeeEEEEEEccceecCCCCccee
Confidence 389999999999999999875543 335678999999873 3577765 589999999885432 1
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
..+++ ..++...- -=..||..++-.|++.|+.-..+.. -....|.+.+.|-.-.
T Consensus 304 ~aAY~-fY~~~t~~----~l~~Lm~DaLi~Ak~~gfDVFNaL~~m~N~~fL~~lKFg~Gd 358 (383)
T 3iu1_A 304 KAAYS-FYNVHTQT----PLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGD 358 (383)
T ss_dssp CEEEE-CCCBCSSS----CHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred eeEEE-EEEeecCC----CHHHHHHHHHHHHHHcCCeEEEcccccccHHHHHHcCCCCCC
Confidence 33333 11222211 1357899999999999999877766 3456788999998754
|
| >2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* | Back alignment and structure |
|---|
Probab=90.05 E-value=1.2 Score=44.43 Aligned_cols=100 Identities=14% Similarity=0.143 Sum_probs=65.4
Q ss_pred EEEECCccCHH---HHHHHHHHHHHc----CcCCcCCHHHHHhhc------CcE-EEEE--ECCEEEEEEEEeee-----
Q 013702 279 GTRTAKVTDLS---GIKQIIQPLVES----GALVRRTDEELLKAL------DSF-YVVE--REGQIIACAALFPF----- 337 (438)
Q Consensus 279 ~IR~at~~D~~---~I~~L~~~~~~~----~~~~~~~~e~l~~~~------~~~-~V~~--~dg~iVG~~~l~~~----- 337 (438)
.-..++..|-+ ++++|+...+-+ .+...++.+-+.-.+ ..+ ..+. .++++|||+.-.|.
T Consensus 57 eW~~~dl~~~~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~~~whiGVR~~~~~kLVgFIsgiP~~irv~ 136 (421)
T 2wuu_A 57 EWWTPNMEAADDIHAIYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPSYIPDWHVAVRRKADKKLLAFIAGVPVTLRMG 136 (421)
T ss_dssp EEECCCTTCHHHHHHHHHHHHHHSCC---CCEEECCCHHHHHHHHCCTTCCGGGEEEEEETTTCCEEEEEEEEEEEEECS
T ss_pred EEEecCCCCHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHHhhcCCCCCCcceEEEEEEccCCcEEEEEeeeeEEEEec
Confidence 34445555544 555555543322 122445555554333 122 3333 36899999987652
Q ss_pred --------------------cCC--CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 338 --------------------FKE--KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 338 --------------------~~~--~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
.+. ..++|..+|||+.+|+++++--|++++.+.+...|+-.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~eINFLCVhKkLRsKRLAPvLIkEITRRvn~~gI~q 199 (421)
T 2wuu_A 137 TPKYMKVKAQEKGQEEEAAKYDAPRHICEINFLCVHKQLREKRLAPILIKEVTRRVNRTNVWQ 199 (421)
T ss_dssp CCHHHHHHHHHTTCHHHHHTTCSCEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccccccccccccccchhcccceeeeeeEEEEEechhHhhccCcHHHHHHHHHHhhhcchhh
Confidence 111 47799999999999999999999999999999988743
|
| >1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A | Back alignment and structure |
|---|
Probab=89.74 E-value=4 Score=40.52 Aligned_cols=101 Identities=14% Similarity=0.124 Sum_probs=66.8
Q ss_pred eEEEECCccCHH---HHHHHHHHHHHcC----cCCcCCHHHHHhhcC------cE-EEEE--ECCEEEEEEEEeeec---
Q 013702 278 EGTRTAKVTDLS---GIKQIIQPLVESG----ALVRRTDEELLKALD------SF-YVVE--REGQIIACAALFPFF--- 338 (438)
Q Consensus 278 ~~IR~at~~D~~---~I~~L~~~~~~~~----~~~~~~~e~l~~~~~------~~-~V~~--~dg~iVG~~~l~~~~--- 338 (438)
+.-..++..|-+ ++++|+...+-+. +...++.+-+.-.+. .+ ..+. ..+++|||+.-.|..
T Consensus 24 FeW~~~Dl~~~~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~k~whiGVR~~~s~kLVgFIsgiP~~irv 103 (392)
T 1iyk_A 24 FEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKL 103 (392)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEE
T ss_pred cEEEEcCCCCHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHhhhccCCCCccceEEEEEEcCCCcEEEEEeeeeEEEEE
Confidence 345556666655 4555544433222 224455555543331 22 3333 368999999877631
Q ss_pred CC-----CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 339 KE-----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 339 ~~-----~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
.+ ..++|..+|||+.+|+|+++--|++++.+.+...|+-.
T Consensus 104 ~~~~~~~~~~eINFLCVhKkLRsKRLAPvLIkEITRRvn~~gI~Q 148 (392)
T 1iyk_A 104 NKSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQ 148 (392)
T ss_dssp TTTTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCC
T ss_pred cCcCceEEEEEEEEEEEcHhHhhcCCcHHHHHHHHHHhhhcccee
Confidence 22 37899999999999999999999999999999888743
|
| >4gs4_A Alpha-tubulin N-acetyltransferase; acetyl coenzyme A binding, cytosolic; HET: ACO; 2.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.31 E-value=1.6 Score=40.38 Aligned_cols=103 Identities=14% Similarity=0.184 Sum_probs=59.1
Q ss_pred HHHHHHHHH-----HHHcCcCCcC-CHHHHHhhcCcEEEEEEC-------CEEEEEEEEee-----ecC-C-----CeEE
Q 013702 289 SGIKQIIQP-----LVESGALVRR-TDEELLKALDSFYVVERE-------GQIIACAALFP-----FFK-E-----KCGE 344 (438)
Q Consensus 289 ~~I~~L~~~-----~~~~~~~~~~-~~e~l~~~~~~~~V~~~d-------g~iVG~~~l~~-----~~~-~-----~~~~ 344 (438)
..+..++.. ....++..+. +.+.+...-+..|+..+. +.++|+.-+.. ++. . ....
T Consensus 45 ~~l~~iID~mG~~SA~AQgL~~~ITS~~kl~~~d~~lYll~d~~~~~~g~~~v~G~LKvG~K~Lfl~d~~g~~~e~~plC 124 (240)
T 4gs4_A 45 QQIMTIIDELGKASAKAQNLSAPITSASRMQSNRHVVYILKDSSARPAGKGAIIGFIKVGYKKLFVLDDREAHNEVEPLC 124 (240)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSCSCCHHHHHTSCEEEEEEECC--------CEEEEEEEEECCEEEECTTSCEEEECCEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCccccHHHHhcCCcEEEEEEecCCCCCCceeEEEEEEEeeeeeEEECCCCCEEEeccce
Confidence 355555543 2444555454 456665443445555432 24788775432 111 1 2234
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHH
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKS 392 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k 392 (438)
+-.|||++..|++|+|++|++++++.-. .....+...- ..-..|..|
T Consensus 125 vLDFYVhes~QR~G~Gk~LF~~ML~~e~-~~p~~lA~DrPS~Kll~FL~K 173 (240)
T 4gs4_A 125 ILDFYIHESVQRHGHGRELFQYMLQKER-VEPHQLAIDRPSQKLLKFLNK 173 (240)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHT-CCGGGCEEESCCHHHHHHHHH
T ss_pred EEEEEeecceeeeccHHHHHHHHHHHcC-CCHhhccccCCCHHHHHHHHH
Confidence 5589999999999999999999996542 1222333333 455666666
|
| >1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* | Back alignment and structure |
|---|
Probab=88.87 E-value=3.3 Score=41.46 Aligned_cols=101 Identities=13% Similarity=0.068 Sum_probs=67.1
Q ss_pred eEEEECCccCHH---HHHHHHHHHHHcC----cCCcCCHHHHHhhcC------cE-EEEE--ECCEEEEEEEEeeec---
Q 013702 278 EGTRTAKVTDLS---GIKQIIQPLVESG----ALVRRTDEELLKALD------SF-YVVE--REGQIIACAALFPFF--- 338 (438)
Q Consensus 278 ~~IR~at~~D~~---~I~~L~~~~~~~~----~~~~~~~e~l~~~~~------~~-~V~~--~dg~iVG~~~l~~~~--- 338 (438)
+.-..+...|-+ ++++|+...+-+. +....+.+-+.-.+. .+ ..+. ..+++|||+.-.|..
T Consensus 46 FeW~~~Dl~~~~~l~Ely~lL~~nYVEDdd~mFRF~YS~eFL~WaL~pPg~~k~whiGVR~~~s~kLVgFIsgiP~~irv 125 (422)
T 1iic_A 46 FEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGV 125 (422)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHSSSCGGGCEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEE
T ss_pred cEEEEcCCCCHHHHHHHHHHHHhCcccCCCCceeeeCCHHHHHhhccCCCCccceEEEEEEccCCcEEEEEeceeEEEEE
Confidence 345566666655 4555544433221 224456555543331 22 3333 368999999977631
Q ss_pred -C--CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 339 -K--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 339 -~--~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
+ -..++|..+|||+.+|+++++--|++++.+.+...|+-.
T Consensus 126 ~~~~~~~~eINFLCVHKKLRsKRLAPVLIkEITRRvn~~gI~Q 168 (422)
T 1iic_A 126 RGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWH 168 (422)
T ss_dssp TTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCC
T ss_pred cceEEEeeEEEEEEechhhhhccCcHHHHHHHHHHhhhcchhe
Confidence 1 257899999999999999999999999999999888743
|
| >1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4 | Back alignment and structure |
|---|
Probab=86.43 E-value=6.2 Score=39.58 Aligned_cols=71 Identities=14% Similarity=-0.045 Sum_probs=50.3
Q ss_pred EEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEE-EcH----------HHHHHHHHCCC
Q 013702 327 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL-LTT----------RTADWFKSRGF 395 (438)
Q Consensus 327 ~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l-~t~----------~a~~fY~k~GF 395 (438)
++|+.+.+.. .++.++...-+.+++|+.-+-...|.-.++++|.++|+++.-+ .+. ...+|=+.+|-
T Consensus 311 ~~lAgal~~~--~~~~~~y~y~gs~~~~~~~~~~~ll~w~~i~~A~~~G~~~ydf~G~~~~~~~~~~~~Gl~~FK~gFg~ 388 (426)
T 1lrz_A 311 LPISAGFFFI--NPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGVVKFKKGYNA 388 (426)
T ss_dssp EEEEEEEEEE--CSSCEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTTCCEEEEEECCSCCSTTCTTHHHHHHHHTTTC
T ss_pred ceeEEEEEEE--ECCEEEEEecCchhhHhhcCCcHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCccccchHHHHhhcCCC
Confidence 6777766653 3345555567789999987778888888999999999998763 331 44555566666
Q ss_pred eEec
Q 013702 396 RECS 399 (438)
Q Consensus 396 ~~~g 399 (438)
+.+.
T Consensus 389 ~~~~ 392 (426)
T 1lrz_A 389 EIIE 392 (426)
T ss_dssp EEEE
T ss_pred CeEE
Confidence 6553
|
| >2ozg_A GCN5-related N-acetyltransferase; YP_325469.1, acetyltransfe (GNAT) family, structural genomics, joint center for struct genomics, JCSG; HET: COA; 2.00A {Anabaena variabilis} SCOP: d.106.1.4 d.108.1.10 | Back alignment and structure |
|---|
Probab=82.80 E-value=20 Score=34.81 Aligned_cols=115 Identities=5% Similarity=-0.087 Sum_probs=71.6
Q ss_pred eEEEECC-ccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecCC--CeEEEE
Q 013702 278 EGTRTAK-VTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE--KCGEVA 346 (438)
Q Consensus 278 ~~IR~at-~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~~--~~~~I~ 346 (438)
..+++++ .+| +.+.+++......... ..++.+.+...+ ..++++..+|+++||+.+.+..+. +...|.
T Consensus 154 ~~v~~~~~~~d-~~~~~~~~~~~~~~~g~~~r~~~~w~~~~~~~~~~~~~~~~~~~~g~~~Gy~~~~~~~~~~~~~~~I~ 232 (396)
T 2ozg_A 154 LPLEPVVLKNN-PIFHELYQQQAQLTHGYLDRHPAIWQGLNRTLDTETLYSYLIGDKDKPQGYIIFTQERTRDGSILRIR 232 (396)
T ss_dssp SCEEECCCTTC-HHHHHHHHHHHHHSTTCEECCHHHHHHHTCCCTTCCCEEEEEEETTEEEEEEEEEEEECSSCEEEEEE
T ss_pred ceEEECCccch-HHHHHHHHHHHhhCCCCccCCHHHHHHHhcccCCCceEEEEECCCCCccEEEEEEEcCCCCcceEEEE
Confidence 3689999 989 8888888776554432 455555454433 345566779999999988854331 155665
Q ss_pred EEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHHCCCeEec
Q 013702 347 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECS 399 (438)
Q Consensus 347 ~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k~GF~~~g 399 (438)
.++.. .......|++++..+. ..+..+.+.+ .....|.+..|++...
T Consensus 233 ~l~a~----~~~a~~~L~~~l~~~~--~~~~~v~~~~p~~~~l~~~l~~~~~~~~~ 282 (396)
T 2ozg_A 233 DWVTL----SNPAVQSFWTFIANHR--SQIDKVTWKSSVIDALTLLLPEQSATIRS 282 (396)
T ss_dssp EEEEC----SHHHHHHHHHHHHTTT--TTCSEEEEEECTTCSGGGGSSSCCCEEEE
T ss_pred EeeeC----CHHHHHHHHHHHHhHh--hhheEEEEEcCCCCchhhhCCCCcceeEe
Confidence 55433 2357777887766532 1356666655 2345566677776543
|
| >1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 | Back alignment and structure |
|---|
Probab=81.05 E-value=2.9 Score=42.57 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=46.8
Q ss_pred ECCEEEEEEEEeeec------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 324 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 324 ~dg~iVG~~~l~~~~------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
..+++|||+.-.|.. .-..++|..+|||+.+|+++++--|++.+.+.+...|+-.
T Consensus 218 ~s~KLVgFIsgiP~~irv~~~~~~~~eINFLCVHKKLRsKRLAPVLIKEITRRvnl~gI~Q 278 (496)
T 1rxt_A 218 SSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQ 278 (496)
T ss_dssp SSSCEEEEECCEECCCCCSSSCCCCEECCCCEECSSCCCSSSHHHHHHHHHHHHTTTTCCC
T ss_pred cCCeEEEEEeeeEEEEEEcceEEEeeeEEEEEecHhhhhccCcHHHHHHHHHHhhhcceee
Confidence 368999999877632 1268899999999999999999999999999998888743
|
| >1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 | Back alignment and structure |
|---|
Probab=80.11 E-value=0.42 Score=48.68 Aligned_cols=116 Identities=16% Similarity=0.189 Sum_probs=80.4
Q ss_pred EEEECCccCHHHHHHHHHHHHHc-CcCCcCCHHHHHhhcC------cEEEEE-ECCEEEEEEEEeeecCC----------
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKALD------SFYVVE-REGQIIACAALFPFFKE---------- 340 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~-~~~~~~~~e~l~~~~~------~~~V~~-~dg~iVG~~~l~~~~~~---------- 340 (438)
.+|++++.|++++.+|++.+... .+....+.+++.+|+- +.||++ .+++|-.|++|+..+..
T Consensus 337 GlR~Me~~Dvp~V~~LL~~Yl~~f~la~~fseeev~Hwflp~e~Vi~sYVvE~~~g~ITDF~SFY~Lpstvi~~~kh~~l 416 (496)
T 1rxt_A 337 GLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSL 416 (496)
T ss_dssp TEEECCGGGSHHHHHHHHHHSTTSSBCCCCCTTTTTTSSSCCSSSEEEEEECCSSSCCCCEEEEECCCBCCCSCSSCCCC
T ss_pred CcccCchhhHHHHHHHHHHHHHhCCceeeCCHHHHHHhcccCCCceEEEEEECCCCcEeeEEEEEEcceeecCCCcchhh
Confidence 49999999999999999887644 3335567788888873 356766 46889999999854321
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
..+|+ ..++...-+ =..||+.++-.|++.|+.-..+.. -....|.+.+.|-.-.
T Consensus 417 ~aAYs-fY~v~t~~~----l~~Lm~DALilAK~~gfDVFNaLd~m~N~~fL~~LKFg~Gd 471 (496)
T 1rxt_A 417 KAAYS-FYNVHTQTP----LLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGD 471 (496)
T ss_dssp CBCCC-CCEECSSSC----TTTHHHHHHHHHHHTTCSBCCCCCCTTHHHHTTTSSCCCCS
T ss_pred hhhhh-hhhccCCcc----HHHHHHHHHHHHHHcCCCEEecccccccHHHHHHCCCCCCC
Confidence 33333 233332211 346999999999999987665444 3456788999998643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 438 | ||||
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 2e-12 | |
| d2btya1 | 282 | c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Th | 1e-10 | |
| d1qsra_ | 162 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 8e-12 | |
| d2gana1 | 182 | d.108.1.1 (A:1-182) Hypothetical protein PH0736 {P | 1e-11 | |
| d2bufa1 | 300 | c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Ps | 2e-11 | |
| d2bufa1 | 300 | c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Ps | 6e-11 | |
| d1i12a_ | 157 | d.108.1.1 (A:) Glucosamine-phosphate N-acetyltrans | 4e-11 | |
| d1ygha_ | 164 | d.108.1.1 (A:) Catalytic domain of GCN5 histone ac | 5e-11 | |
| d1n71a_ | 180 | d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransfera | 8e-11 | |
| d2ap9a1 | 291 | c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {My | 1e-10 | |
| d1r57a_ | 102 | d.108.1.1 (A:) Hypothetical protein SA2309 {Staphy | 1e-10 | |
| d1yx0a1 | 151 | d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bac | 6e-10 | |
| d1z4ra1 | 162 | d.108.1.1 (A:497-658) Catalytic domain of GCN5 his | 9e-10 | |
| d2hv2a2 | 285 | d.108.1.10 (A:2-286) Hypothetical protein EF1021 { | 3e-09 | |
| d1sqha_ | 297 | d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fr | 1e-08 | |
| d1gs5a_ | 258 | c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escheri | 3e-08 | |
| d1y9ka1 | 152 | d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillu | 3e-08 | |
| d1y9wa1 | 140 | d.108.1.1 (A:1-140) Probable acetyltransferase BC2 | 5e-08 | |
| d2i00a2 | 291 | d.108.1.10 (A:10-300) Putative acetyltransferase E | 6e-08 | |
| d1vkca_ | 149 | d.108.1.1 (A:) Putative acetyltransferase PF0028 { | 7e-08 | |
| d2aj6a1 | 118 | d.108.1.1 (A:1-118) Hypothetical protein MW0638 {S | 1e-07 | |
| d2fiaa1 | 157 | d.108.1.1 (A:1-157) Probable acetyltransferase EF1 | 4e-07 | |
| d1m4ia_ | 181 | d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransfera | 4e-07 | |
| d1z4ea1 | 150 | d.108.1.1 (A:4-153) Transcriptional regulator BH19 | 6e-07 | |
| d2i6ca1 | 160 | d.108.1.1 (A:1001-1160) Putative acetyltransferase | 7e-07 | |
| d2g3aa1 | 137 | d.108.1.1 (A:1-137) Probable acetyltransferase Atu | 2e-06 | |
| d1u6ma_ | 189 | d.108.1.1 (A:) Putative acetyltransferase EF0945 { | 4e-05 | |
| d1p0ha_ | 308 | d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacter | 9e-05 | |
| d1tiqa_ | 173 | d.108.1.1 (A:) Protease synthase and sporulation n | 1e-04 | |
| d1ghea_ | 170 | d.108.1.1 (A:) Tabtoxin resistance protein {Pseudo | 1e-04 | |
| d1cjwa_ | 166 | d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep | 2e-04 | |
| d1b7ba_ | 307 | c.73.1.1 (A:) Carbamate kinase {Enterococcus faeci | 3e-04 | |
| d1s3za_ | 147 | d.108.1.1 (A:) Aminoglycoside N-acetyltransferase | 4e-04 | |
| d1ufha_ | 155 | d.108.1.1 (A:) Putative acetyltransferase YycN {Ba | 4e-04 |
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 64.8 bits (157), Expect = 2e-12
Identities = 30/126 (23%), Positives = 52/126 (41%)
Query: 22 CNIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGC 81
N + + V + + + D G G+VKKV+ + ++
Sbjct: 102 INKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDY 161
Query: 82 LVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEA 141
+ +++ +G G N N A A ++ A+KLI + D + + G LI LT EA
Sbjct: 162 IPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEA 221
Query: 142 DSLIRQ 147
+ LIR
Sbjct: 222 EELIRD 227
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Score = 59.8 bits (144), Expect = 1e-10
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 228 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 272
G + ++ A R GV VH+++G + +LLE+F R G+GTM+
Sbjct: 233 GMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMI 277
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Score = 60.9 bits (147), Expect = 8e-12
Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 318 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
S +++ + ++I + ++ EVA + V+ + +G G +L++ + ++
Sbjct: 48 SMVILKNKQKVIGGICFRQYKPQRFAEVAFLAVTANEQVRGYGTRLMNKFKDHMQKQNIE 107
Query: 378 MLFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427
L A +FK +GF + M E+ + I + P
Sbjct: 108 YLLTYADNFAIGYFKKQGFTK-EHRMPQEKWKGYIKDYDGGTLMECYIHPY 157
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Score = 61.4 bits (148), Expect = 1e-11
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 29/160 (18%)
Query: 259 LLELFKRDGMGTMVASDLYE-GTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD 317
LLEL R T E R D +G +++ +P ++ L + D
Sbjct: 17 LLELMFRIYRSTNGKYPALEWVKRKPNPNDFNGFREVYEPFLK---------FRLSQEFD 67
Query: 318 SFYVVEREGQIIACAALFP--------------FFKEKCGEVAAIGVSPECRGQGQGDKL 363
Y +++ +II AL EK G + V PE +G+G G L
Sbjct: 68 ELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTL 127
Query: 364 LDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 399
L++ K+ SLG D +++T + ++ +GFRE
Sbjct: 128 LEFAVKRLRSLGKD-PYVVTFPNLEAYSYYYMKKGFREIM 166
|
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 62.5 bits (151), Expect = 2e-11
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 228 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 277
G L ++ A + GV H++DG + +LLE+F G+GT++++
Sbjct: 250 GMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRKR 299
|
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 60.9 bits (147), Expect = 6e-11
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 1 MEAAGGIRMMIEAKLSPGPPICN-IRRHGDSSRWHEVGVSVASGNFLAAKRKGVV----- 54
+ M++ +++ I N I RHG S+ +G++ + AK+ V
Sbjct: 93 AATMDVVEMVLGGQVNK--DIVNLINRHGGSA----IGLTGKDAELIRAKKLTVTRQTPE 146
Query: 55 ----DGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACAL 110
+ +D G GEV V+V + + G + +++ +G S+GE N N VA A
Sbjct: 147 MTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAE 206
Query: 111 AIEADKLICIIDGP-ILDESGHLIRFLTLQEADSLIRQ 147
A++A+KL+ + + ++D+ G ++ L+ ++ + LI
Sbjct: 207 ALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIAD 244
|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 157 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Glucosamine-phosphate N-acetyltransferase GNA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.8 bits (141), Expect = 4e-11
Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 24/146 (16%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS------------------FYVV 322
R + DL + + ++ L G + + +L+K + V
Sbjct: 8 RRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVD 67
Query: 323 EREGQIIACAALFPFFKE-----KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
+R + A + K CG + I V+ + +GQG G L+D + G
Sbjct: 68 KRTETVAATGNIIIERKIIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCY 127
Query: 378 MLFLLTTRTA-DWFKSRGFRECSIEM 402
+ L +++ GF +EM
Sbjct: 128 KIILDCDEKNVKFYEKCGFSNAGVEM 153
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.0 bits (142), Expect = 5e-11
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Query: 318 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
S V+ + ++ PF K + E+ +S + +G G L+++++ +
Sbjct: 49 SMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNI 108
Query: 378 MLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427
FL +FK +GF + I + I +LP
Sbjct: 109 KYFLTYADNYAIGYFKKQGFTK-EITLDKSIWMGYIKDYEGGTLMQCSMLPR 159
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} Length = 180 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Score = 58.8 bits (141), Expect = 8e-11
Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Query: 271 MVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIA 330
M+ S+ ++ LS + ++ P + EE++ + +++
Sbjct: 1 MIISE-FDRNNPVLKDQLSDLLRLTWPEEYGDSSAEEV-EEMMNPERIAVAAVDQDELVG 58
Query: 331 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 383
P + E+ + V R G +L++Y+EK+ AS G ++L T
Sbjct: 59 FIGAIPQYGITGWELHPLVVESSRRKNQIGTRLVNYLEKEVASRGGITIYLGT 111
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 59.5 bits (143), Expect = 1e-10
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 228 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 272
G + ++ A GV H++DG + +L+ELF G GT V
Sbjct: 244 GMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKV 288
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} Length = 102 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Score = 55.8 bits (134), Expect = 1e-10
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 308 TDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI 367
++ E+ + + FY+ + E +A + F + GVS E GQG G KLL +
Sbjct: 2 SNLEIKQGENKFYIGDDENNALAEIT-YRFVDNNEINIDHTGVSDELGGQGVGKKLLKAV 60
Query: 368 EKKAASLGLDMLFLLTTRTADWFK 391
+ A L ++ + +
Sbjct: 61 VEHARENNLKIIASCSF-AKHMLE 83
|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YsnE species: Bacillus subtilis [TaxId: 1423]
Score = 55.6 bits (133), Expect = 6e-10
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 284 KVTDLSGIKQIIQPLVESGALVRR-TDEELLKALD---------SFYVVEREGQIIACAA 333
K+ DL+G +Q++ + E + + E + AL +F+ ++ C A
Sbjct: 4 KIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGA 62
Query: 334 LFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD----- 388
L GE+ ++ S +G ++L +I ++A G + L L T A
Sbjct: 63 LKELDTR-HGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPAR 121
Query: 389 -WFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424
++S GF+ C E NS + KKL
Sbjct: 122 KLYESFGFQYC-------EPFADYGEDPNSVFMTKKL 151
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.1 bits (132), Expect = 9e-10
Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
Query: 319 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378
+ ++G++I F + E+ V+ + +G G L++++++ +
Sbjct: 54 TLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILY 113
Query: 379 LFLLTTRTA-DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYM-KKLLP 426
A +FK +GF + +P+ R M +L P
Sbjct: 114 FLTYADEYAIGYFKKQGFSK--DIKVPKSRYLGYIKDYEGATLMECELNP 161
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Score = 55.2 bits (132), Expect = 3e-09
Identities = 16/129 (12%), Positives = 43/129 (33%), Gaps = 8/129 (6%)
Query: 281 RTAKVTDLSGIKQIIQP-LVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFF- 338
+ ++ + ++ + R+ E L + Y + Q+ + PF
Sbjct: 6 KKMGKEEMKEMFDLVIYAFNQEPTAERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQV 65
Query: 339 -----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 393
+ + + PE RG+G ++ + A + L L + +++
Sbjct: 66 NFHGVRYPMAGIGYVASYPEYRGEGGISAIMKEMLADLAKQKVA-LSYLAPFSYPFYRQY 124
Query: 394 GFRECSIEM 402
G+ + +
Sbjct: 125 GYEQTFEQA 133
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 53.8 bits (129), Expect = 1e-08
Identities = 29/193 (15%), Positives = 55/193 (28%), Gaps = 27/193 (13%)
Query: 225 RLNGYLSELAAA--AFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEG--T 280
L RGV + + L D DL
Sbjct: 117 LLTNVDLGFCNRVKELAVSRGVTAIQPRQ-----CFGMVLSHEDAF-CAKVPDLPSEFEI 170
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVERE-GQIIACAALFPFFK 339
R + D + + G + L++ S + + G++IA F
Sbjct: 171 RRLRAEDAAMVHDSWPN---KGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQNDF-- 225
Query: 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGF 395
+ + V P+ +G G L + ++ A L R+ K G+
Sbjct: 226 ---SGLGMLQVLPKAERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKRIGY 282
Query: 396 RECS----IEMIP 404
++ I+++P
Sbjct: 283 QKDLVNEWIKLVP 295
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Score = 52.5 bits (124), Expect = 3e-08
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 228 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274
G + ++ AA R + V + L LF MGT + +
Sbjct: 213 GMIVKVNAALDAARTLGRPVDIASWRHAE-QLPALFNGMPMGTRILA 258
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} Length = 152 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Score = 50.5 bits (120), Expect = 3e-08
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 319 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378
YV ++ G +I L + K E+ I V+ +G+G G KLL + + A G+
Sbjct: 37 TYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHLQGKGIGKKLLRHAVETAKGYGMSK 95
Query: 379 LFLLT----TRTADWFKSRGFRECSIE 401
L + T ++ GFR SI+
Sbjct: 96 LEVGTGNSSVSQLALYQKCGFRIFSID 122
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} Length = 140 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Score = 49.5 bits (117), Expect = 5e-08
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 11/109 (10%)
Query: 318 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
S V EG+I +F + + V R G G +LL IE A G
Sbjct: 41 SLVVKNEEGKIFGGVTGTMYFYHLH--IDFLWVDESVRHDGYGSQLLHEIEGIAKEKGCR 98
Query: 378 MLFLLTTRT-ADWFKSR-GFRECSIEMIPEERRKRINLSRNSKYYMKKL 424
++ L + A F + G+RE + + ++ K+L
Sbjct: 99 LILLDSFSFQAPEFYKKHGYREYG-------VVEDHPKGHSQHFFEKRL 140
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Score = 51.5 bits (122), Expect = 6e-08
Identities = 23/169 (13%), Positives = 59/169 (34%), Gaps = 18/169 (10%)
Query: 281 RTAKVTDLSGIKQIIQ--------PLVESGALVRRTDEELLKAL---DSFYVVEREGQII 329
+ + + +++ + ESG +R + + + + E Q+I
Sbjct: 4 KPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLI 63
Query: 330 ACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT 383
+ A++P K G V +G PE G L+ ++ + L
Sbjct: 64 SQIAIYPCEVNIHGALYKMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQW-ISYLF 122
Query: 384 TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPDTSGII 432
+++ +G+ S ++ + R ++ + +++L D +
Sbjct: 123 PYNIPYYRRKGWEIMSDKLSFKIRDTQLPKTVPVPGMIERLAVDHPDVF 171
|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} Length = 149 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PF0028 species: Pyrococcus furiosus [TaxId: 2261]
Score = 49.4 bits (117), Expect = 7e-08
Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 12/100 (12%)
Query: 319 FYVVEREGQIIACAALFPFF----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL 374
F + +++ + K + I V RG G G LL E+ A
Sbjct: 55 FVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAKER 114
Query: 375 GLDMLFLLTTRT---ADWFKSRGFRECSIEMIPEERRKRI 411
G + L W++ RG++ ++ M K I
Sbjct: 115 GAKKIVLRVEIDNPAVKWYEERGYKARALIM-----EKPI 149
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} Length = 118 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Score = 48.0 bits (113), Expect = 1e-07
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 15/114 (13%)
Query: 281 RTAKVTDLSGIKQIIQ---PLVESGALVRRTDEE------------LLKALDSFYVVERE 325
RT + + IKQI L+ + + L D Y+ E E
Sbjct: 2 RTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENE 61
Query: 326 GQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 379
GQ+IA ++ + + V P+ R G +L +EK A ++ +
Sbjct: 62 GQLIAFIWGHFSNEKSMVNIELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRI 115
|
| >d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} Length = 157 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase EF1919 species: Enterococcus faecalis [TaxId: 1351]
Score = 47.4 bits (111), Expect = 4e-07
Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 20/159 (12%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGAL--------VRRTDEELLKALD--SFYVVEREGQIIA 330
R A +L I Q + + + + ++ + + Y++ E I +
Sbjct: 4 RVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFS 63
Query: 331 CAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW- 389
A ++ + SP +G G L +EK+A G ++ T T
Sbjct: 64 MATFCMEQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRM 123
Query: 390 ---FKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 425
F+S+GF + E + L S Y K L
Sbjct: 124 IRFFESKGFTKI------HESLQMNRLDFGSFYLYVKEL 156
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 181 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 47.9 bits (113), Expect = 4e-07
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 8/124 (6%)
Query: 281 RTAKVTDLS-GIKQIIQPLVESGALVRRTDEELLKALDSFYV-VEREGQIIACAALFPF- 337
R DL +Q I+ +V T+ + L + + G IIA AA+
Sbjct: 9 RLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRR 68
Query: 338 -----FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKS 392
+CG V + V + RGQ LLD +E+ + R + S
Sbjct: 69 LIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYAS 128
Query: 393 RGFR 396
RG+
Sbjct: 129 RGWL 132
|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} Length = 150 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Transcriptional regulator BH1968 species: Bacillus halodurans [TaxId: 86665]
Score = 46.5 bits (109), Expect = 6e-07
Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 20/142 (14%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGA------LVRRTDEELLKALDS-----FYVVEREGQII 329
R A DL + ++ V + + K + V +I+
Sbjct: 5 REATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIV 64
Query: 330 ACAALFPFFK-----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT- 383
+ + + RGQG G +L+ + ++A G ++ L T
Sbjct: 65 GMLQVTFTPYLTYQGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTD 124
Query: 384 ---TRTADWFKSRGFRECSIEM 402
+++ GF+ +
Sbjct: 125 KQRPDALRFYEQLGFKASHEGL 146
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.7 bits (109), Expect = 7e-07
Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 18/158 (11%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRR-----TDEELLKALDS---FYVVEREGQIIACA 332
R A+ DL + Q E + + +L A+ V +GQ++ A
Sbjct: 6 RPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFA 65
Query: 333 ALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYI-----EKKAASLGLDMLFLLTTRTA 387
+ + + + V+P RG G L+ + E+ A L F
Sbjct: 66 NFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGL 125
Query: 388 DWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 425
+ G++ +I + +R+ L M K L
Sbjct: 126 LLYTQLGYQPRAIAERHDPDGRRVAL-----IQMDKPL 158
|
| >d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} Length = 137 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2258 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 44.9 bits (105), Expect = 2e-06
Identities = 27/146 (18%), Positives = 45/146 (30%), Gaps = 14/146 (9%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKE 340
+ V D K I PLV R E + L + + + +
Sbjct: 4 VLSDVADAEAEKAIRDPLVAYNL--ARFGESDKRDL-NITIRNDDNSVTGGLVGHTARGW 60
Query: 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-WFKSR-GFREC 398
V + V RGQG KLL E++A G ++ T R GF +
Sbjct: 61 LY--VQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFTKI 118
Query: 399 SIEMIPEERRKRINLSRNSKYYMKKL 424
++ ++ + K+
Sbjct: 119 -------GSLGPLSSGQSITWLEKRF 137
|
| >d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} Length = 189 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0945 species: Enterococcus faecalis [TaxId: 1351]
Score = 42.0 bits (97), Expect = 4e-05
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 60/195 (30%)
Query: 281 RTAKVTDLSGIKQIIQPL---VESGALVRRTDEELLKALDSFY-------------VVER 324
R+A D I +++ + +E L ++E+++ L V E
Sbjct: 4 RSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEH 63
Query: 325 EGQIIACAALFPFFKEK------------------------------CGEVAAIGVSPEC 354
G++ A +P EK + I V
Sbjct: 64 AGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERF 123
Query: 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKR 410
RG G G KLLD + + A + G L L + S+GF++ + I
Sbjct: 124 RGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFKDVTTMTISGHLY-- 181
Query: 411 INLSRNSKYYMKKLL 425
+M+K +
Sbjct: 182 --------NHMQKEV 188
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 42.0 bits (97), Expect = 9e-05
Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 9/129 (6%)
Query: 281 RTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALDS-------FYVVEREGQIIACAA 333
+ ++ ++ + V E++L+ L G II
Sbjct: 6 SALTADEQRSVRALVT-ATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLN 64
Query: 334 LFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 393
L P + G +A + V P+ R +G G + K A +
Sbjct: 65 LSPP-RGAGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASAL 123
Query: 394 GFRECSIEM 402
G +
Sbjct: 124 GLVGVRELI 132
|
| >d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} Length = 173 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Protease synthase and sporulation negative regulatory protein PaiA species: Bacillus subtilis [TaxId: 1423]
Score = 40.6 bits (94), Expect = 1e-04
Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 33/172 (19%)
Query: 281 RTAKVTDLSGIKQI-----------------IQPLVESGALVRRTDEELLKALDSFYVVE 323
+ DL ++Q+ ++ +ES + ++EL F+ +
Sbjct: 5 KKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIY 64
Query: 324 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD 377
+ +I + + E+ I + + G G LL+ + A
Sbjct: 65 FDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKK 124
Query: 378 MLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 425
++L ++K GF + + + M K L
Sbjct: 125 NIWLGVWEKNENAIAFYKKMGFVQTG------AHSFYMGDEEQTDLIMAKTL 170
|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Tabtoxin resistance protein species: Pseudomonas syringae [TaxId: 317]
Score = 40.3 bits (93), Expect = 1e-04
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
Query: 300 ESGALVRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKC---GEVAAIGVSPECRG 356
++ A ++ +VV + ++A A L K EV + V P RG
Sbjct: 42 QAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQKPNGLNRAEVQKLMVLPSARG 101
Query: 357 QGQGDKLLDYIEKKAASLGLDMLFLLTTRTADW---FKSRGFRECSIEMIPEERRKRINL 413
+G G +L+D +E+ A +L L T + + + + +P
Sbjct: 102 RGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGE--LPGYCATPDGR 159
Query: 414 SRNSKYYMKKL 424
+ Y K L
Sbjct: 160 LHPTAIYFKTL 170
|
| >d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Serotonin N-acetyltranferase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 39.6 bits (91), Expect = 2e-04
Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 25/150 (16%)
Query: 270 TMVASDLYEGTRTAKVTDLSGIKQIIQ-----PLVESGALVRRTDEELLKALDSFYVVER 324
T+ A++ R D +G+ +I + + L +
Sbjct: 2 TLPANEF----RCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFV 57
Query: 325 EGQIIACAALFPFFKEKC--------------GEVAAIGVSPECRGQGQGDKLLDYIEKK 370
EG+++A + +E+ + A+ V R QG+G LL
Sbjct: 58 EGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHH 117
Query: 371 AASLGLDMLFLLTTRTA--DWFKSRGFREC 398
+ +L A +++ GF
Sbjct: 118 VGAQPAVRRAVLMCEDALVPFYQRFGFHPA 147
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Score = 40.3 bits (93), Expect = 3e-04
Identities = 7/45 (15%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Query: 228 GYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMV 272
L ++ AA + ++ L + + +GT+V
Sbjct: 266 SMLPKIEAAIQFVESQPNKQAIITS---LENLGSMSGDEIVGTVV 307
|
| >d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} Length = 147 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside N-acetyltransferase AAC(6')-IY species: Salmonella enteritidis [TaxId: 149539]
Score = 38.3 bits (88), Expect = 4e-04
Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 16/143 (11%)
Query: 281 RTAKVTDLSGIKQIIQPLVESG---ALVRRTDEELLKALDSFYVVEREGQIIACAALFPF 337
R T L + + + L A + +E L + ++ +G I A
Sbjct: 6 RQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQADHLASFIAMADGVAIGFADASIR 65
Query: 338 FK-------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRT 386
+ I V P R +G +L+ +++ + G + T T +
Sbjct: 66 HDYVNGCDSSPVVFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTIS 125
Query: 387 ADWFKSRGFRECSIEMIPEERRK 409
++ GF E E + R++
Sbjct: 126 QKVHQALGFEE--TERVIFYRKR 146
|
| >d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} Length = 155 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase YycN species: Bacillus subtilis [TaxId: 1423]
Score = 38.5 bits (88), Expect = 4e-04
Identities = 17/99 (17%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 319 FYVVEREGQIIACAALFPFFK--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376
+ + E I+ + + ++ + G+ RG+G + L +++ A S+G+
Sbjct: 62 WSLKLNEKDIVGWLWIHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGI 121
Query: 377 DMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRI 411
L L ++ GF+E + M K++
Sbjct: 122 RKLSLHVFAHNQTARKLYEQTGFQETDVVM-----SKKL 155
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 438 | |||
| d2bufa1 | 300 | N-acetyl-l-glutamate kinase {Pseudomonas aeruginos | 100.0 | |
| d2btya1 | 282 | N-acetyl-l-glutamate kinase {Thermotoga maritima [ | 99.97 | |
| d2ap9a1 | 291 | N-acetyl-l-glutamate kinase {Mycobacterium tubercu | 99.96 | |
| d1b7ba_ | 307 | Carbamate kinase {Enterococcus faecium [TaxId: 135 | 99.87 | |
| d1e19a_ | 313 | Carbamate kinase {Archaeon Pyrococcus furiosus [Ta | 99.87 | |
| d2fiwa1 | 156 | Probable N-acetyltransferase RPA1999 {Rhodopseudom | 99.77 | |
| d1gs5a_ | 258 | N-acetyl-l-glutamate kinase {Escherichia coli [Tax | 99.76 | |
| d1yr0a1 | 163 | Phosphinothricin acetyltransferase {Agrobacterium | 99.75 | |
| d1tiqa_ | 173 | Protease synthase and sporulation negative regulat | 99.74 | |
| d2fiaa1 | 157 | Probable acetyltransferase EF1919 {Enterococcus fa | 99.74 | |
| d2i6ca1 | 160 | Putative acetyltransferase PA4794 {Pseudomonas aer | 99.73 | |
| d2fe7a1 | 156 | Probable N-acetyltransferase PA0478 {Pseudomonas a | 99.73 | |
| d1mk4a_ | 157 | Hypothetical protein YqiY {Bacillus subtilis [TaxI | 99.72 | |
| d1n71a_ | 180 | Aminoglycoside 6'-N-acetyltransferase {Enterococcu | 99.71 | |
| d1vhsa_ | 165 | Putative phosphinothricin acetyltransferase YwnH { | 99.7 | |
| d1yvoa1 | 169 | Hypothetical protein PA4866 {Pseudomonas aeruginos | 99.7 | |
| d1s3za_ | 147 | Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal | 99.69 | |
| d1qsra_ | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.69 | |
| d1yx0a1 | 151 | Hypothetical protein YsnE {Bacillus subtilis [TaxI | 99.68 | |
| d2atra1 | 137 | Probable acetyltransferase SP0256 {Streptococcus p | 99.68 | |
| d1y9wa1 | 140 | Probable acetyltransferase BC2806 {Bacillus cereus | 99.68 | |
| d1ghea_ | 170 | Tabtoxin resistance protein {Pseudomonas syringae | 99.68 | |
| d1z4ea1 | 150 | Transcriptional regulator BH1968 {Bacillus halodur | 99.66 | |
| d2ae6a1 | 161 | Putative acetyltransferase EF0244 {Enterococcus fa | 99.66 | |
| d1u6ma_ | 189 | Putative acetyltransferase EF0945 {Enterococcus fa | 99.65 | |
| d1i12a_ | 157 | Glucosamine-phosphate N-acetyltransferase GNA1 {Ba | 99.64 | |
| d2cy2a1 | 174 | Probable acetyltransferase TTHA1209 {Thermus therm | 99.64 | |
| d1ygha_ | 164 | Catalytic domain of GCN5 histone acetyltransferase | 99.63 | |
| d1cjwa_ | 166 | Serotonin N-acetyltranferase {Sheep (Ovis aries) [ | 99.63 | |
| d2ge3a1 | 164 | Probable acetyltransferase Atu2290 {Agrobacterium | 99.63 | |
| d2fl4a1 | 146 | Probable spermine/spermidine acetyltransferase EF1 | 99.61 | |
| d1z4ra1 | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.61 | |
| d2jdca1 | 145 | Probable acetyltransferase YitI {Bacillus lichenif | 99.61 | |
| d1y9ka1 | 152 | IAA acetyltransferase {Bacillus cereus [TaxId: 139 | 99.61 | |
| d1y7ra1 | 133 | Hypothetical protein SA2161 {Staphylococcus aureus | 99.61 | |
| d2euia1 | 153 | Probable acetyltransferase PA4026 {Pseudomonas aer | 99.59 | |
| d1ufha_ | 155 | Putative acetyltransferase YycN {Bacillus subtilis | 99.59 | |
| d1qsma_ | 150 | Histone acetyltransferase HPA2 {Baker's yeast (Sac | 99.59 | |
| d2b5ga1 | 167 | Diamine acetyltransferase 1 {Human (Homo sapiens) | 99.58 | |
| d1q2ya_ | 140 | Probable acetyltransferase YjcF {Bacillus subtilis | 99.57 | |
| d2beia1 | 167 | Diamine acetyltransferase 2 {Human (Homo sapiens) | 99.57 | |
| d2g3aa1 | 137 | Probable acetyltransferase Atu2258 {Agrobacterium | 99.57 | |
| d2akoa1 | 250 | Glutamate 5-kinase {Campylobacter jejuni [TaxId: 1 | 99.56 | |
| d1yvka1 | 152 | Hypothetical protein YvbK (BSu33890) {Bacillus sub | 99.56 | |
| d1wwza1 | 157 | Hypothetical protein PH1933 {Pyrococcus horikoshii | 99.53 | |
| d2brxa1 | 225 | Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: | 99.51 | |
| d1vkca_ | 149 | Putative acetyltransferase PF0028 {Pyrococcus furi | 99.5 | |
| d1bo4a_ | 137 | Aminoglycoside 3-N-acetyltransferase {Serratia mar | 99.47 | |
| d2gana1 | 182 | Hypothetical protein PH0736 {Pyrococcus horikoshii | 99.47 | |
| d1xeba_ | 149 | Hypothetical protein PA0115 {Pseudomonas aeruginos | 99.42 | |
| d2aj6a1 | 118 | Hypothetical protein MW0638 {Staphylococcus aureus | 99.4 | |
| d2ij9a1 | 219 | Uridylate kinase PyrH {Archaeoglobus fulgidus [Tax | 99.39 | |
| d2ozga2 | 283 | Putative acetyltransferase Ava4977 {Anabaena varia | 99.38 | |
| d1s7ka1 | 174 | L7/L12-Ribosomal-protein-serine acetyltransferase | 99.36 | |
| d1yk3a1 | 198 | Hypothetical protein Rv1347c/MT1389 {Mycobacterium | 99.36 | |
| d2i00a2 | 291 | Putative acetyltransferase EF2353 {Enterococcus fa | 99.35 | |
| d2hv2a2 | 285 | Hypothetical protein EF1021 {Enterococcus faecalis | 99.34 | |
| d1nsla_ | 180 | Probable acetyltransferase YdaF {Bacillus subtilis | 99.33 | |
| d1yrea1 | 183 | Hypothetical protein PA3270 {Pseudomonas aeruginos | 99.28 | |
| d1m4ia_ | 181 | Aminoglycoside 2'-N-acetyltransferase {Mycobacteri | 99.24 | |
| d2fcka1 | 178 | Putative ribosomal-protein-serine acetyltransferas | 99.22 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 99.22 | |
| d2fsra1 | 164 | Probable acetyltranferase Atu2435 {Agrobacterium t | 99.2 | |
| d2a1fa1 | 236 | Uridylate kinase PyrH {Haemophilus influenzae [Tax | 99.19 | |
| d1sqha_ | 297 | Hypothetical protein cg14615-pa {Fruit fly (Drosop | 99.13 | |
| d1r57a_ | 102 | Hypothetical protein SA2309 {Staphylococcus aureus | 99.08 | |
| d2hmfa1 | 302 | Aspartokinase {Methanococcus jannaschii [TaxId: 21 | 98.85 | |
| d1ybda1 | 236 | Uridylate kinase PyrH {Neisseria meningitidis [Tax | 98.84 | |
| d2cdqa1 | 304 | Aspartokinase {Thale cress (Arabidopsis thaliana) | 98.76 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 98.57 | |
| d2j0wa1 | 292 | Aspartokinase {Escherichia coli [TaxId: 562]} | 98.48 | |
| d1z9da1 | 238 | Uridylate kinase PyrH {Streptococcus pyogenes [Tax | 98.36 | |
| d1ro5a_ | 197 | Autoinducer synthesis protein LasI {Pseudomonas ae | 98.29 | |
| d1ylea1 | 338 | Arginine N-succinyltransferase, alpha chain, AstA | 97.9 | |
| d1kzfa_ | 210 | Acyl-homoserinelactone synthase EsaI {Pantoea stew | 97.73 | |
| d1xmta_ | 95 | Hypothetical protein AT1g77540 {Thale cress (Arabi | 97.66 | |
| d1lrza3 | 182 | Methicillin resistance protein FemA {Staphylococcu | 96.85 | |
| d1boba_ | 315 | Histone acetyltransferase HAT1 {Baker's yeast (Sac | 95.44 | |
| d1iica1 | 185 | N-myristoyl transferase, NMT {Baker's yeast (Sacch | 94.96 | |
| d1ne9a2 | 171 | Peptidyltransferase FemX {Weissella viridescens [T | 94.89 | |
| d1rxta1 | 141 | N-myristoyl transferase, NMT {Human (Homo sapiens) | 94.65 | |
| d1iica2 | 237 | N-myristoyl transferase, NMT {Baker's yeast (Sacch | 94.14 | |
| d1iyka1 | 165 | N-myristoyl transferase, NMT {Yeast (Candida albic | 94.09 | |
| d2d4pa1 | 130 | Hypothetical protein TTHA1254 {Thermus thermophilu | 93.99 | |
| d1iyka2 | 227 | N-myristoyl transferase, NMT {Yeast (Candida albic | 93.85 | |
| d2giva1 | 271 | Probable histone acetyltransferase MYST1 {Human (H | 92.83 | |
| d2ozua1 | 270 | Histone acetyltransferase MYST3 {Human (Homo sapie | 91.47 | |
| d1fy7a_ | 273 | Histone acetyltransferase ESA1 {Baker's yeast (Sac | 90.75 | |
| d1rxta2 | 201 | N-myristoyl transferase, NMT {Human (Homo sapiens) | 84.32 | |
| d2ozga2 | 283 | Putative acetyltransferase Ava4977 {Anabaena varia | 80.31 |
| >d2bufa1 c.73.1.2 (A:2-301) N-acetyl-l-glutamate kinase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.6e-35 Score=289.75 Aligned_cols=182 Identities=29% Similarity=0.488 Sum_probs=165.8
Q ss_pred CCCCcc-cccccCCCCCcceeeeeeecccEEEEEecccc---------cCCCcceeeeEeeeCHHHHHHHhcCCceEEEc
Q 013702 17 PGPPIC-NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVV---------DGVDYGATGEVKKVDVTRMRERLDGGCLVILS 86 (438)
Q Consensus 17 ~~~~l~-~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~---------~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~ 86 (438)
+++.|+ .|+++|.+ |+|+++.|++++.+++..+. +++|+||+|+|++||++.|+.||+.|+|||++
T Consensus 107 vn~~lv~~l~~~g~~----a~~l~~~d~~~i~~~~~~~~~~~~~~~~~~~id~g~~G~v~~v~~~~i~~ll~~g~Ipvis 182 (300)
T d2bufa1 107 VNKDIVNLINRHGGS----AIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIA 182 (300)
T ss_dssp HHHHHHHHHHHTTCC----EEEEEETGGGCEEEEECCCCCC--------CCCCBSBEEEEEECHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCc----ccccCCCccceEEeecccccccCcccccccccccCcccceeecchhHHHHHhcCCCeEEec
Confidence 445566 77777876 99999999999999987643 46899999999999999999999999999999
Q ss_pred CcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCccc-cCCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcc
Q 013702 87 NLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPIL-DESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEE 165 (438)
Q Consensus 87 ~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~-~~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~ 165 (438)
|++++.+|+.+|+|+|.+|+++|.+|+|||||||||++|+ +.+++++++++.++++++++++.
T Consensus 183 ~~~~~~~G~~~nin~D~~Aa~lA~~L~AdkLI~Ltdv~Gv~~~~g~~~~~l~~~~~~~li~~~~---------------- 246 (300)
T d2bufa1 183 PIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIADGT---------------- 246 (300)
T ss_dssp EEEECTTSCEEECCHHHHHHHHHHHHTCSEEEEEESSSCCBCTTSCBCCEECHHHHHHHHHTTC----------------
T ss_pred ccccCcccchhcccHHHHHHHHHHHcCCCeEEEEcCCCccccCCCcchhhccHHHHHHHHHcCC----------------
Confidence 9999999999999999999999999999999999999987 57799999999999999987764
Q ss_pred cccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCC
Q 013702 166 DITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQ 245 (438)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 245 (438)
+ +| | |.+||++|..||+.||+
T Consensus 247 -------------i------------------------~g-G---------------------M~~Kl~aa~~a~~~Gv~ 267 (300)
T d2bufa1 247 -------------I------------------------YG-G---------------------MLPKIRCALEAVQGGVT 267 (300)
T ss_dssp -------------S------------------------CT-T---------------------HHHHHHHHHHHHHTTCS
T ss_pred -------------c------------------------Cc-h---------------------HHHHHHHHHHHHHcCCC
Confidence 1 22 4 99999999999999999
Q ss_pred eEEeeccccCceeeeehhhcCCCcccccCCce
Q 013702 246 RVHLLDGTIGGVLLLELFKRDGMGTMVASDLY 277 (438)
Q Consensus 246 ~~~i~~g~~~~~ll~el~~~~g~GT~i~~d~~ 277 (438)
||||+||+.|++|+.||||++|.||+|+++.|
T Consensus 268 rv~Ii~g~~~~~ll~eLft~~g~GT~I~~~~~ 299 (300)
T d2bufa1 268 SAHIIDGRVPNAVLLEIFTDSGVGTLISNRKR 299 (300)
T ss_dssp EEEEEETTSTTHHHHHHSSTTCCSEEEECCCC
T ss_pred EEEEecCCCCCHHHHHHcCCCCceeEEecCCC
Confidence 99999999999999999999999999998876
|
| >d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=1.4e-31 Score=259.36 Aligned_cols=173 Identities=31% Similarity=0.502 Sum_probs=158.7
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.|+++|.+ ++++++.+.+...+... .+..|++++|++++||++.|+.+|+.|.|||++|++++++|+++|+|+|
T Consensus 109 ~l~~~g~~----a~~l~~~~~~~~~~~~~--~~~~d~~~~g~~~~v~~~~i~~lL~~~~ipvi~~~~~~~~g~~~nl~~d 182 (282)
T d2btya1 109 NLNLHGGR----AVGICGKDSKLIVAEKE--TKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINAD 182 (282)
T ss_dssp HHHTTTCC----EEEEETTGGGSEEEEEC--CTTCCCBSBEEEEEECTHHHHHHHHTTCEEEEESEEECSSSCEEECCHH
T ss_pred HHHhcCCC----eeeeeccccceeEeccc--cccccccccccccccChHHHHHHHhCCCceeecCcccCCcceeeecccc
Confidence 56667765 99999999999998874 5678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCccccCCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCcccccc
Q 013702 103 EVATACALAIEADKLICIIDGPILDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSS 182 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g~~~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (438)
++|+++|.+|+||+|||+||++|+.+++++|++++..|++.+++++. +
T Consensus 183 ~~aa~iA~~l~AdkLI~ltdv~Gl~~d~~~i~~~~~~~~~~~~~~~~-----------------------------~--- 230 (282)
T d2btya1 183 TAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGT-----------------------------V--- 230 (282)
T ss_dssp HHHHHHHHHHTCSEEEEEESSSSCEETTEECCEECHHHHHHHHTTTC-----------------------------S---
T ss_pred chhHHHhhhcCCceeEEeccccceecCccccccCCHHHHHHHHHcCC-----------------------------c---
Confidence 99999999999999999999999988899999999999999876543 1
Q ss_pred CCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeeh
Q 013702 183 QNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLEL 262 (438)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el 262 (438)
+| | |.+||++|..||++||+||||+||+.|++++.||
T Consensus 231 ---------------------tg-G---------------------M~~Kl~aA~~A~~~GV~~v~I~~g~~~~~ll~el 267 (282)
T d2btya1 231 ---------------------TG-G---------------------MIPKVECAVSAVRGGVGAVHIINGGLEHAILLEI 267 (282)
T ss_dssp ---------------------CT-T---------------------HHHHHHHHHHHHHTTCSCEEEEETTSTTHHHHHH
T ss_pred ---------------------Cc-h---------------------HHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHH
Confidence 23 4 9999999999999999999999999999999999
Q ss_pred hhcCCCcccccCCc
Q 013702 263 FKRDGMGTMVASDL 276 (438)
Q Consensus 263 ~~~~g~GT~i~~d~ 276 (438)
|+++|.||+|+.++
T Consensus 268 ft~~g~GT~I~~~e 281 (282)
T d2btya1 268 FSRKGIGTMIKELE 281 (282)
T ss_dssp SSSSCSSEEECCCC
T ss_pred hCCCCceEEEEeCC
Confidence 99999999998764
|
| >d2ap9a1 c.73.1.2 (A:6-296) N-acetyl-l-glutamate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.96 E-value=5.1e-30 Score=249.43 Aligned_cols=171 Identities=27% Similarity=0.387 Sum_probs=151.9
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEeccc---ccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeec
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGV---VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNC 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~---~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ni 99 (438)
.+..+|. .++++++.+++++.+.+... .++.|++++|+++.+|.+.|+.+|+.|.|||++|++++++|+.+|+
T Consensus 113 ~~~~~g~----~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~G~v~~v~~~~I~~ll~~g~ipvi~~~~~~~~g~~~n~ 188 (291)
T d2ap9a1 113 LINAHGP----YAVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNI 188 (291)
T ss_dssp HHTTSSS----CEEEEETTGGGCEEEEECCBCSSSCCBCCBSEEEEEEECHHHHHHHHHTTCEEEEESEEECTTCCEEEE
T ss_pred HHHhcCC----ccccchhhhcccccccccccccccccccceeecccccchHHHHHHHHhcCCCcccCccccCCccccccc
Confidence 3444454 49999999999999988652 3568999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHcCCCEEEEEecCccccC----CCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCC
Q 013702 100 NTYEVATACALAIEADKLICIIDGPILDE----SGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDS 175 (438)
Q Consensus 100 naD~~A~~lA~aL~A~~li~ltdv~g~~~----~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (438)
|+|.+|+++|.+|+||+||||||++|+.. ..+.+++++..+++++++..
T Consensus 189 d~D~lAa~lA~~l~AdkLI~LTdv~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 241 (291)
T d2ap9a1 189 NADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDTGTLAQLLPTL--------------------------- 241 (291)
T ss_dssp CHHHHHHHHHHHTTCSEEEEEESSSSEETTTTCTTCEESEEEHHHHHHHGGGS---------------------------
T ss_pred cHHHHHHHHHHhcCCcEEEEeeccCcccccccccccccccCCHHHHHHHHhhh---------------------------
Confidence 99999999999999999999999998842 36788889999988886431
Q ss_pred CccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccC
Q 013702 176 IGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIG 255 (438)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~ 255 (438)
+| | |.+||++|..||++||+||||+||+.|
T Consensus 242 ----------------------------~g-G---------------------M~~Kl~aA~~a~~~Gv~rv~Ii~g~~~ 271 (291)
T d2ap9a1 242 ----------------------------EL-G---------------------MVPKVEACLRAVIGGVPSAHIIDGRVT 271 (291)
T ss_dssp ----------------------------CT-T---------------------THHHHHHHHHHHHHTCSEEEEEETTST
T ss_pred ----------------------------hC-c---------------------hHHHHHHHHHHHHcCCCEEEEeCCCCC
Confidence 22 4 999999999999999999999999999
Q ss_pred ceeeeehhhcCCCcccccC
Q 013702 256 GVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 256 ~~ll~el~~~~g~GT~i~~ 274 (438)
++|+.|||+++|.||+|.+
T Consensus 272 ~~ll~eLft~~g~GT~I~r 290 (291)
T d2ap9a1 272 HCVLVELFTDAGTGTKVVR 290 (291)
T ss_dssp THHHHHHHSCCCCSEEEEC
T ss_pred CHHHHHHhcCCCCceEEec
Confidence 9999999999999999975
|
| >d1b7ba_ c.73.1.1 (A:) Carbamate kinase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Enterococcus faecium [TaxId: 1352]
Probab=99.87 E-value=1.8e-23 Score=203.80 Aligned_cols=165 Identities=13% Similarity=0.098 Sum_probs=136.2
Q ss_pred CCcceeeeeeecccEEEEEeccc--------ccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCc------ccCCCCCe
Q 013702 31 SRWHEVGVSVASGNFLAAKRKGV--------VDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNL------GYSSSGEV 96 (438)
Q Consensus 31 ~~~~avgl~g~~g~~i~a~~~~~--------~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i------~~~~~g~~ 96 (438)
.+.+++|+++.++.+..+.+.+. ....+.++++.+..++.+.+..+++.+.||+++|+ +.+.+|++
T Consensus 124 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~g~~ 203 (307)
T d1b7ba_ 124 NPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVE 203 (307)
T ss_dssp SCCEEEEEEECHHHHHHHHTTTCCEEEETTTEEEEEECCCCEEEETTHHHHHHHHHTTEEEECSGGGCEEEETTTTEECS
T ss_pred ccCcceeeecccchHHHHHHhhcceeccccccceeecCcCceeeeechhhhhhhhhcCceeeccCCccccccccCCCCcE
Confidence 34569999999887766554331 12245667788888999999999999999997654 56678999
Q ss_pred eecChHHHHHHHHHHcCCCEEEEEecCcccc-----CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccC
Q 013702 97 LNCNTYEVATACALAIEADKLICIIDGPILD-----ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFG 171 (438)
Q Consensus 97 ~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-----~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 171 (438)
+|+|+|++|+++|.+|+||+|||||||+|+. ++++++++++.+|++++++++.
T Consensus 204 ~ninaD~lAa~iA~~l~Ad~Li~lTdv~Gv~~~~~~~~~~~i~~l~~~e~~~l~~~g~---------------------- 261 (307)
T d1b7ba_ 204 AVIDKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQAGH---------------------- 261 (307)
T ss_dssp CCCCHHHHHHHHHHHHTCSEEEEECSSSSCEETTTSTTCEECSEEEHHHHHHHHHTTC----------------------
T ss_pred EecchhHHHHHHHHHhhhhheeeccccCceeeCCCcccccccccCCHHHHHHHHHCCC----------------------
Confidence 9999999999999999999999999999883 3467899999999999987653
Q ss_pred CCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeec
Q 013702 172 HSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLD 251 (438)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~ 251 (438)
+.+| | |.|||++|..|+++||+++||++
T Consensus 262 ------------------------------~~~G-G---------------------M~pKl~aA~~al~~Gv~~~~ii~ 289 (307)
T d1b7ba_ 262 ------------------------------FAPG-S---------------------MLPKIEAAIQFVESQPNKQAIIT 289 (307)
T ss_dssp ------------------------------SCTT-T---------------------HHHHHHHHHHHHTTSTTCEEEEE
T ss_pred ------------------------------cccC-C---------------------hHHHHHHHHHHHHcCCCeEEEEC
Confidence 1133 4 99999999999999999999997
Q ss_pred cccCceeeeehhhcCCCcccc
Q 013702 252 GTIGGVLLLELFKRDGMGTMV 272 (438)
Q Consensus 252 g~~~~~ll~el~~~~g~GT~i 272 (438)
+. . .+.++|++++.||.|
T Consensus 290 ~~--~-~l~~l~~~~~~GT~I 307 (307)
T d1b7ba_ 290 SL--E-NLGSMSGDEIVGTVV 307 (307)
T ss_dssp CH--H-HHTTCSSCSCEEECC
T ss_pred CH--H-HHHHHHcCCCCCCCC
Confidence 63 2 468999999999986
|
| >d1e19a_ c.73.1.1 (A:) Carbamate kinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: Carbamate kinase domain: Carbamate kinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.87 E-value=1.3e-22 Score=198.67 Aligned_cols=169 Identities=15% Similarity=0.074 Sum_probs=134.9
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEeccc--------------------ccCCCcceeeeEeeeCHHHHHHHhcCCce
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGV--------------------VDGVDYGATGEVKKVDVTRMRERLDGGCL 82 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~--------------------~~~~d~g~vG~v~~v~~~~i~~ll~~g~I 82 (438)
.+++++.+ ++++++.++++.+++.... ....+.+.++.+..++.+.|..+++++.+
T Consensus 112 ~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~~~~i~~~~~~~~i 187 (313)
T d1e19a_ 112 IITQTIVD----KNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVI 187 (313)
T ss_dssp BCCEEEEC----TTCGGGTSCCEEEEEEECHHHHHHHHHHHCCEEEECTTSCEEEEECCCCEEEETTHHHHHHHHHTTCE
T ss_pred HHHhhhhh----hHHHHhhccCceeehhhhhhHHHHHHhhcCceeeeccCccceeeccCCCceeEecccceeeccccchh
Confidence 55555554 7888888888888876420 01123456777889999999999999999
Q ss_pred EEEcCcccCC--------CCCeeecChHHHHHHHHHHcCCCEEEEEecCccc-----cCCCcccccCCHHHHHHHHHhhh
Q 013702 83 VILSNLGYSS--------SGEVLNCNTYEVATACALAIEADKLICIIDGPIL-----DESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 83 PVi~~i~~~~--------~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~-----~~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
|++++.+..+ +|+.+|+|+|++|+++|.+|+||+|||||||+|+ ++++++|++++.+|++++++.+.
T Consensus 188 ~vl~~~~~~~v~~~~~~~~G~~~ninaD~lAa~vA~~l~Ad~LIlLTdv~Gv~~~~~~~~~~~i~~l~~~e~~~li~~g~ 267 (313)
T d1e19a_ 188 VIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGH 267 (313)
T ss_dssp EECSGGGCEEEEEETTEEEECCCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEETTTSTTCEECCEEEHHHHHHHHHTTC
T ss_pred hhhccCCCCCccccCCCcCceEEecchhHHHHHHHHHHHHHHHHhccCCcceeccCCCcccceeeeCCHHHHHHHhhCCC
Confidence 9998776543 6999999999999999999999999999999988 35689999999999999987653
Q ss_pred hhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccc
Q 013702 150 KQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGY 229 (438)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~ 229 (438)
+.+| | |
T Consensus 268 ----------------------------------------------------~~~G-G---------------------M 273 (313)
T d1e19a_ 268 ----------------------------------------------------FKAG-S---------------------M 273 (313)
T ss_dssp ----------------------------------------------------SCTT-T---------------------H
T ss_pred ----------------------------------------------------cccC-C---------------------h
Confidence 1133 4 9
Q ss_pred hHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 230 LSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 230 ~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
.+||++|..|+++|++++||.++ +. +.+++.++ .||+|.+
T Consensus 274 ~~Kv~aA~~a~~~Gv~~v~I~~~---~~-i~~~l~g~-~GT~i~P 313 (313)
T d1e19a_ 274 GPKVLAAIRFIEWGGERAIIAHL---EK-AVEALEGK-TGTQVLP 313 (313)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEG---GG-HHHHHTTS-SSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEECCh---HH-HHHHHCCC-CCCEEcC
Confidence 99999999999999999999653 33 45667664 7999864
|
| >d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase RPA1999 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=99.77 E-value=2e-18 Score=151.29 Aligned_cols=138 Identities=20% Similarity=0.209 Sum_probs=105.0
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHH-------------HHHhhc--CcEEEEEECCEEEEEEEEeeecCCC
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDE-------------ELLKAL--DSFYVVEREGQIIACAALFPFFKEK 341 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e-------------~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~ 341 (438)
.+.||+++++|.+.|.+|+............+.+ .+...+ ..++|++.++++|||+.+.+
T Consensus 3 ~~~IR~a~~~D~~~l~~l~~~a~~~~~~~~y~~~~~~~w~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~----- 77 (156)
T d2fiwa1 3 TPALRPYLPEDAAVTAAIFVASIEQLTADDYSEEQQEAWASAADDEAKFAARLSGQLTLIATLQGVPVGFASLKG----- 77 (156)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHHCTTTSCHHHHHHHHGGGSSHHHHHHHHHTSEEEEEEETTEEEEEEEEET-----
T ss_pred CcEEeeCCHHHHHHHHHHHHHHHHhhhhhcCCHHHHHhhccCCCCHHHHHHhccCceEEEEEECCEEEEEEeecc-----
Confidence 3579999999999999998775543222222222 222222 35789999999999998863
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEE
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYY 420 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~ 420 (438)
..+|..++|+|+|||||+|++||++++++|++.|+..+.+.+ ..+.+||+|+||+.++....+.. ...-..+.
T Consensus 78 ~~~i~~l~V~p~~~g~GiG~~Ll~~~~~~a~~~g~~~l~~~~~~~A~~fY~k~GF~~~~~~~~~~~------g~~l~~~~ 151 (156)
T d2fiwa1 78 PDHIDMLYVHPDYVGRDVGTTLIDALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRNTVSIN------GEWLANTT 151 (156)
T ss_dssp TTEEEEEEECGGGCSSSHHHHHHHHHHHHHHTTTCSEEEEEECTTTHHHHHTTTCEEEEEEEEEET------TEEEEEEE
T ss_pred chhHHHHhccHHHcCCCHHHHHHHHHHHHHHhcCCCEEEEEeccchhHHHHhCCCEEEEEEEEeEC------CEEEEEEE
Confidence 237899999999999999999999999999999999999887 57899999999999876544321 12234577
Q ss_pred EEccC
Q 013702 421 MKKLL 425 (438)
Q Consensus 421 ~k~ll 425 (438)
|+|.|
T Consensus 152 M~K~L 156 (156)
T d2fiwa1 152 MTKSL 156 (156)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 77754
|
| >d1gs5a_ c.73.1.2 (A:) N-acetyl-l-glutamate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: N-acetyl-l-glutamate kinase domain: N-acetyl-l-glutamate kinase species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=1.4e-18 Score=162.85 Aligned_cols=167 Identities=25% Similarity=0.316 Sum_probs=140.9
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChH
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTY 102 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD 102 (438)
.++..|.+ +..++..+.+.....+. ..++.+++++..++...+..+++.+.+|++.|++.+.+++.+++++|
T Consensus 91 ~~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~i~v~~~~~~~~~~~~~~~~~~ 162 (258)
T d1gs5a_ 91 WAKKHQIA----AVGLFLGDGDSVKVTQL----DEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNAD 162 (258)
T ss_dssp HHHHTTCC----EEEECTTGGGCEEEEEC----CGGGBSBEEEEECCCHHHHHHHHTTCEEEECSEEECTTSCEEECCHH
T ss_pred HHhccCcc----ccccccccccccccccc----cccccccccccccccchHHHHHhccccccccccccccCCcEEEechh
Confidence 44555554 78888888888887764 36889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEecCcc-ccCCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccc
Q 013702 103 EVATACALAIEADKLICIIDGPI-LDESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYS 181 (438)
Q Consensus 103 ~~A~~lA~aL~A~~li~ltdv~g-~~~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (438)
.+|+.+|.+|+|+++ ++||+++ .+.+...++.++..+...+...+.
T Consensus 163 ~~a~~~a~~l~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 209 (258)
T d1gs5a_ 163 QAATALAATLGADLI-LLSDVSGILDGKGQRIAEMTAAKAEQLIEQGI-------------------------------- 209 (258)
T ss_dssp HHHHHHHHHHTCEEE-EEESSSSCBCTTSCBCCEECHHHHHHHHHTTC--------------------------------
T ss_pred hhhhhHHHHHHhhhh-hhcccccccccccccccccchHHHHHHHhCCc--------------------------------
Confidence 999999999999975 5566664 556788888888888777755432
Q ss_pred cCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeee
Q 013702 182 SQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLE 261 (438)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~e 261 (438)
.+| | |.+||++|..|+++||++|||+||+.++ +|.+
T Consensus 210 ---------------------~tG-G---------------------M~~Kl~aA~~a~~~Gv~~v~I~~g~~~~-~L~~ 245 (258)
T d1gs5a_ 210 ---------------------ITD-G---------------------MIVKVNAALDAARTLGRPVDIASWRHAE-QLPA 245 (258)
T ss_dssp ---------------------SCT-H---------------------HHHHHHHHHHHHHHHTSCEEEEESSCGG-GHHH
T ss_pred ---------------------ccc-h---------------------HHHHHHHHHHHHHcCCCEEEEEeCCCch-HHHH
Confidence 133 3 9999999999999999999999999887 5789
Q ss_pred hhhcCCCcccccC
Q 013702 262 LFKRDGMGTMVAS 274 (438)
Q Consensus 262 l~~~~g~GT~i~~ 274 (438)
+|++++.||.|.+
T Consensus 246 l~~g~~~GT~i~a 258 (258)
T d1gs5a_ 246 LFNGMPMGTRILA 258 (258)
T ss_dssp HHTTCCSSEEECC
T ss_pred HhcCCCCceEEeC
Confidence 9999999999863
|
| >d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Phosphinothricin acetyltransferase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.75 E-value=2.3e-17 Score=144.37 Aligned_cols=124 Identities=23% Similarity=0.225 Sum_probs=102.3
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCc----CCcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecC---CCeE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK---EKCG 343 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~---~~~~ 343 (438)
++||+++++|++.|.+++++...... ..+.+.+.+..++ ..++|++.++++||++.+.+... ....
T Consensus 2 i~IR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~ 81 (163)
T d1yr0a1 2 VELRDATVDDLSGIMEIYNDAVVNTTAIWNEVVVDLENRKDWFAARTSRGFPVIVAILDGKVAGYASYGDWRAFDGYRHT 81 (163)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHCSSSSSCCCCCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhhccCCCcEEEEEECCeEEEeecceeecccccccce
Confidence 68999999999999999987644322 2345666655544 34788999999999999876432 2456
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.+..++|+|+|||+|+|++|+++++++|+++|++.+++.+ ..+++||+|+||+.++..
T Consensus 82 ~~~~~~v~p~~rg~Glg~~ll~~~~~~a~~~g~~~l~~~v~~~N~~a~~~y~k~GF~~~G~~ 143 (163)
T d1yr0a1 82 REHSVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGRF 143 (163)
T ss_dssp EEEEEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeeeeecccCCCCceeeeecccccccccccceEEEEEecCCHHHHHHHHHCCCEEEEEE
Confidence 7779999999999999999999999999999999999887 589999999999998864
|
| >d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Protease synthase and sporulation negative regulatory protein PaiA species: Bacillus subtilis [TaxId: 1423]
Probab=99.74 E-value=3.9e-17 Score=144.93 Aligned_cols=126 Identities=15% Similarity=0.179 Sum_probs=103.0
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHH-------------Hhhc----CcEEEEEECCEEEEEEEEeeec--
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEEL-------------LKAL----DSFYVVEREGQIIACAALFPFF-- 338 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l-------------~~~~----~~~~V~~~dg~iVG~~~l~~~~-- 338 (438)
++||+++++|++.|.++....+.+.+....+.+++ ...+ ..+++++.++++|||+.+....
T Consensus 2 i~ir~at~~D~~~l~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~ 81 (173)
T d1tiqa_ 2 VKMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQ 81 (173)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHSSHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEGGGS
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHhcCCHHHHHHHHhCCCcEEEEEEECCEecceEEEEecCcc
Confidence 68999999999999999877665544433343333 2222 2478899999999999987522
Q ss_pred ----CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceecc
Q 013702 339 ----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMI 403 (438)
Q Consensus 339 ----~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~l 403 (438)
....++|..++|+|+|||+|+|++||++++++|++.|++.+.+.+ ..+++||+|+||+.++....
T Consensus 82 ~~~~~~~~~~i~~i~v~~~~rgkGig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~fY~k~GF~~~g~~~~ 154 (173)
T d1tiqa_ 82 SEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWEKNENAIAFYKKMGFVQTGAHSF 154 (173)
T ss_dssp SSCCCTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred ccccCCCeEEEEEEEECHHHcCCCCCcchhHhhhhhhhhhhcchhhccccccCHHHHHHHHHCCCEEeeEEEe
Confidence 236889999999999999999999999999999999999999987 57999999999999986543
|
| >d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase EF1919 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.74 E-value=5.3e-17 Score=141.26 Aligned_cols=127 Identities=20% Similarity=0.269 Sum_probs=105.6
Q ss_pred eEEEECCccCHHHHHHHHHHHH----HcCcC----CcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCCCeEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLV----ESGAL----VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAA 347 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~----~~~~~----~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~ 347 (438)
|+||+++++|++.|.+++.... ..+.. .....+.+...+ ..+|+++.+++++|++.+....+...+++..
T Consensus 1 m~iR~a~~~Dl~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~i~~ 80 (157)
T d2fiaa1 1 MKIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCMEQEQDFVWLKR 80 (157)
T ss_dssp CCEEECCGGGTTHHHHHHHHHHHHHHHHTCCCCCSSSSCHHHHHHHHHTTCEEEEEETTEEEEEEEEEECTTCSEEEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHhcCcchhhccchhHHHHHHhhccCceEEEEECCEEEEEEEEeecCccceeeecc
Confidence 4799999999999999987642 11111 112456665543 5688999999999999998777778899999
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccc
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp 404 (438)
++|+|+|||+|+|++|+++++++|++.|++.+.+.| .++++||+|+||+.++....+
T Consensus 81 ~~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~v~e~~~~ 141 (157)
T d2fiaa1 81 FATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESLQM 141 (157)
T ss_dssp EEECGGGTTTTHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEECCT
T ss_pred cEECHHHcCCCCcchhhHHHHHHHHHCCCCEEEEEecCCcHHHHHHHHHCCCEEeeeECCc
Confidence 999999999999999999999999999999999988 489999999999999876433
|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PA4794 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.73 E-value=3.5e-17 Score=142.87 Aligned_cols=146 Identities=18% Similarity=0.207 Sum_probs=113.4
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHc-----CcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVES-----GALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAA 347 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~-----~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~ 347 (438)
|.++||+++++|++.+.++....... ....+.+.+++.+.+ ..++|++.+|++|||+.+........++|..
T Consensus 1 M~lt~R~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~vG~~~~~~~~~~~~~~i~~ 80 (160)
T d2i6ca1 1 MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGN 80 (160)
T ss_dssp CCCEEEECCGGGHHHHHTCCCSHHHHHHHCTTCCSSCCHHHHHHHHHHSEEEEEEEETTEEEEEEEEEEEETTTEEEEEE
T ss_pred CceEEecCCHHHHHHHHHHHhCHHHHhhhcccccCCCCHHHHHHHHhccCCeEEEEECCEEEEEeeeeccccCCEEEEEE
Confidence 45789999999999999987553221 223455666666544 4578889999999999998777778999999
Q ss_pred EEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEE
Q 013702 348 IGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK 422 (438)
Q Consensus 348 v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k 422 (438)
++|+|+|||||+|++|++.++++|++. +.+.+.+.+ ..+++||+|+||+.++..+... .+..+...+.|+
T Consensus 81 ~~V~p~~rgkGig~~ll~~~~~~a~~~~~~~~i~~~~~~~N~~a~~~y~k~GF~~~~~~~~~~-----~~g~~~~~~~m~ 155 (160)
T d2i6ca1 81 MMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHD-----PDGRRVALIQMD 155 (160)
T ss_dssp EEECGGGTTTTHHHHHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEEEC-----TTSCEEEEEEEE
T ss_pred eEeCHhHcCCcchhhhhHHHHHHHHHhccccceeeecccccchhhhHHHhCCCEEEEEEEeec-----CCCCEEEEEEEe
Confidence 999999999999999999999999775 678787766 4799999999999987553221 133344566677
Q ss_pred ccCC
Q 013702 423 KLLP 426 (438)
Q Consensus 423 ~ll~ 426 (438)
|.|.
T Consensus 156 k~l~ 159 (160)
T d2i6ca1 156 KPLE 159 (160)
T ss_dssp EECC
T ss_pred eeCC
Confidence 7664
|
| >d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable N-acetyltransferase PA0478 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.73 E-value=5.5e-17 Score=141.58 Aligned_cols=122 Identities=23% Similarity=0.256 Sum_probs=98.9
Q ss_pred eEEEECCccCHHHHHHHHHHHHH---cCcCCcCCHHHHHhhc------CcEEEEEECCEEEEEEEEeeec----CCCeEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL------DSFYVVEREGQIIACAALFPFF----KEKCGE 344 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~---~~~~~~~~~e~l~~~~------~~~~V~~~dg~iVG~~~l~~~~----~~~~~~ 344 (438)
++||+++++|++.|.+|+..+.. .......+.+.+.+.+ ..++|++.++++|||+.+.+.. ....++
T Consensus 1 i~IR~a~~~D~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~ 80 (156)
T d2fe7a1 1 LEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLSEGRPIGYAVFFYSYSTWLGRNGIY 80 (156)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEETTEEEEEEEEEEEEETTTTEEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHHHhccCCCceEEEEeeCCEEEEEEeEeecccccccCCeEE
Confidence 57999999999999999877532 1222445677776653 2468889999999999876532 236788
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEec
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECS 399 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g 399 (438)
+..++|+|+|||+|+|++|+++++++|++.|+..+.+.+ ..+++||+|+||+..+
T Consensus 81 i~~~~V~p~~Rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~~~~ 139 (156)
T d2fe7a1 81 LEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDWNQPAIDFYRSIGALPQD 139 (156)
T ss_dssp EEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEECT
T ss_pred eeeeeechhhhccChHHHHHHHHHHHHHHccCCcceEEEcCCCHHHHHHHHHCCCEEcC
Confidence 999999999999999999999999999999999999988 4899999999999865
|
| >d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YqiY species: Bacillus subtilis [TaxId: 1423]
Probab=99.72 E-value=1.7e-17 Score=144.94 Aligned_cols=146 Identities=12% Similarity=0.114 Sum_probs=111.5
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHH-HhhcCcEEEEEECCEEEEEEEEeee-cCCCeEEEEEEEECcccc
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEEL-LKALDSFYVVEREGQIIACAALFPF-FKEKCGEVAAIGVSPECR 355 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l-~~~~~~~~V~~~dg~iVG~~~l~~~-~~~~~~~I~~v~V~p~yR 355 (438)
|+||+++.+|++.|.++++..+............+ .......|+++.++++|||+..... .....+++..++|+|+||
T Consensus 2 m~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~i~~i~V~p~~r 81 (157)
T d1mk4a_ 2 MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSFITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFR 81 (157)
T ss_dssp CEEEECCGGGHHHHHHHTTTSSTTCCCSCCCCTHHHHHCGGGCEEEESSSSEEEEEEEEECSSSTTEEEEEEEEECTTSC
T ss_pred cEEEeCCHHHHHHHHHHHHHHhcCCchhhHHHHhhhhccCceEEEEEECCEEEEEeeeeeeccCCccceeeEEEEEHHHc
Confidence 68999999999999999887654433322222222 2233467899999999999876543 345789999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccch--HhhhhhcCCCCceEEEEc
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPE--ERRKRINLSRNSKYYMKK 423 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~--~~~~~y~~~r~s~~~~k~ 423 (438)
|+|+|++|++.+++++++.|+.++.+.+ +.+++||+|+||+..+....+. .....|+....+.++|.|
T Consensus 82 g~Gig~~Ll~~~~~~~~~~g~~~v~~~~~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~~~y~g~~~d~~~~~k 155 (157)
T d1mk4a_ 82 KMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEKGTKTVNGISVFANYDGPGQDRVLFVK 155 (157)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECCCSEEETTEEEBTTTTSTTCCBEEEEE
T ss_pred CCcccchHHHHHHHhhccccceEEEEEeccchHHHHHHHHHCCCEEeeeEeccCCceeEccCCCCCCEEEEEEE
Confidence 9999999999999999999999999988 4789999999999876543322 334556666666666543
|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 6'-N-acetyltransferase species: Enterococcus faecium [TaxId: 1352]
Probab=99.71 E-value=2e-16 Score=141.76 Aligned_cols=144 Identities=14% Similarity=0.222 Sum_probs=107.4
Q ss_pred eEEEECCccCH---HHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEEC
Q 013702 278 EGTRTAKVTDL---SGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 351 (438)
Q Consensus 278 ~~IR~at~~D~---~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~ 351 (438)
|.|+.++.++. +.+.++....+++.+.. ...+.+.... ..++++.++++++|++.+.+..+...++|..++|+
T Consensus 1 miI~e~~~~~p~~~~~l~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~va~~~~~iig~~~~~~~~~~~~~~I~~i~V~ 79 (180)
T d1n71a_ 1 MIISEFDRNNPVLKDQLSDLLRLTWPEEYGD-SSAEEVEEMMNPERIAVAAVDQDELVGFIGAIPQYGITGWELHPLVVE 79 (180)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHCTTTSSS-THHHHHHHHTCTTSEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEC
T ss_pred CeEEEccccChHHHHHHHHHHHHhCCcccCc-chHHHHHHHhCCCCEEEEEEECCeEEEEEEEEEecCCCEEEEEEEEEc
Confidence 46888888874 56666655554443322 1233333333 46888999999999998877666788999999999
Q ss_pred ccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcH-----------------------------HHHHHHHHCCCeEeceec
Q 013702 352 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLTT-----------------------------RTADWFKSRGFRECSIEM 402 (438)
Q Consensus 352 p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~-----------------------------~a~~fY~k~GF~~~g~~~ 402 (438)
|+|||||+|++||++++++|++.|+..++|.|. .+.+||+|+||+.++..
T Consensus 80 p~~rg~GiG~~Ll~~~~~~a~~~G~~~i~L~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~fY~k~Gf~~~g~~- 158 (180)
T d1n71a_ 80 SSRRKNQIGTRLVNYLEKEVASRGGITIYLGTDDLDHGTTLSQTDLYEHTFDKVASIQNLREHPYEFYEKLGYKIVGVL- 158 (180)
T ss_dssp TTSCSSSHHHHHHHHHHHHHHHTTCCEEEEEEECSSSCBTTSSSCTTSSHHHHHHTCCBSSCCTHHHHHHTTCEEEEEE-
T ss_pred hHHhccHHHHHHHHHHHHHHHHCCCCEEEEEecCcccccchhhhhcccccccccchhccccHHHHHHHHHCCCEEEeee-
Confidence 999999999999999999999999999999761 47899999999999754
Q ss_pred cchHhhhhhcCCCCceEEEEccCCCC
Q 013702 403 IPEERRKRINLSRNSKYYMKKLLPDT 428 (438)
Q Consensus 403 lp~~~~~~y~~~r~s~~~~k~ll~~~ 428 (438)
|+ .|.+...+.+|.|++.|..
T Consensus 159 -~~----~~g~~~~~~~m~k~l~~~~ 179 (180)
T d1n71a_ 159 -PN----ANGWDKPDIWMAKTIIPRP 179 (180)
T ss_dssp -TT----TTSTTCCEEEEEEECSCCC
T ss_pred -cC----CCCCCCCcEEEEEecCCCC
Confidence 32 2344454555556676743
|
| >d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative phosphinothricin acetyltransferase YwnH species: Bacillus subtilis [TaxId: 1423]
Probab=99.70 E-value=6e-17 Score=142.21 Aligned_cols=145 Identities=24% Similarity=0.362 Sum_probs=107.4
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC----CcCCHHHHHhhc------CcEEEEE-ECCEEEEEEEEeeecC----CCe
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL------DSFYVVE-REGQIIACAALFPFFK----EKC 342 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~~------~~~~V~~-~dg~iVG~~~l~~~~~----~~~ 342 (438)
++||+++++|++.|.+++++....... .+.+.++...++ ..++++. .++++||++.+.++.. ...
T Consensus 2 ~~iR~a~~~D~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~~~~~~ 81 (165)
T d1vhsa_ 2 LTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPLYVAEDENGNVAAWISFETFYGRPAYNKT 81 (165)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTTTSSCSCSSCCCGGGGHHHHHTCCSSSCEEEEECTTSCEEEEEEEEESSSSGGGTTE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhcccccccCCCCHHHHHHHHHhccccCCeEEEEecCCceEeeeeeeeccccccccce
Confidence 689999999999999999876544322 233444433332 2356555 4689999999876432 234
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCce
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 418 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~ 418 (438)
+++ .++|+|+|||+|+|++|++.++++|++.|++.+.+.+ .++++||+|+||+.++...- ....+....+.
T Consensus 82 ~~~-~~~v~~~~rg~Gig~~l~~~~~~~~~~~g~~~i~~~v~~~N~~a~~~y~k~GF~~~g~~~~----~~~~~g~~~D~ 156 (165)
T d1vhsa_ 82 AEV-SIYIDEACRGKGVGSYLLQEALRIAPNLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPG----IAEMDGKRYDL 156 (165)
T ss_dssp EEE-EEEECGGGCSSSHHHHHHHHHHHHGGGGTCSEEEEEEETTCHHHHHHHHHTTCEEEEEEEE----EEEETTEEEEE
T ss_pred EEE-eeecCchhhcccccchhhhhhhhhhccccceeEEEEEecCCHHHHHHHHHCCCEEEEEEcC----eEEECCEEEEE
Confidence 555 7999999999999999999999999999999999887 58999999999999986321 01223334567
Q ss_pred EEEEccCCC
Q 013702 419 YYMKKLLPD 427 (438)
Q Consensus 419 ~~~k~ll~~ 427 (438)
++|.|.+.+
T Consensus 157 ~~m~k~l~~ 165 (165)
T d1vhsa_ 157 KILGRELSE 165 (165)
T ss_dssp EEEEEECCC
T ss_pred EEEEeECCC
Confidence 888887753
|
| >d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA4866 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.70 E-value=1.6e-16 Score=139.90 Aligned_cols=145 Identities=18% Similarity=0.153 Sum_probs=108.4
Q ss_pred EEEECCccCHHHHHHHHHHHHHcCc----CCcCCHHHHHhhc-------CcEEEEE-ECCEEEEEEEEeeecCC---CeE
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVE-REGQIIACAALFPFFKE---KCG 343 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~~-------~~~~V~~-~dg~iVG~~~l~~~~~~---~~~ 343 (438)
+||+++++|++.|.+++++...... ..+.+.+++..++ ..++++. .+++++|++.+.+.... ...
T Consensus 1 tiR~a~~~D~~~i~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vG~~~~~~~~~~~~~~~~ 80 (169)
T d1yvoa1 1 SIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGT 80 (169)
T ss_dssp CEEECCGGGHHHHHHHHHHHHHHCSSSSCCSCCCHHHHHHHHHHHHHHTCCEEEEECTTCCEEEEEEEEESSSSGGGTTE
T ss_pred CcccCcHHHHHHHHHHHHHHHhhcceecccCCCCHHHHHHHHHhhhccCCceEEEEecCCCEEEeeccccccccccccce
Confidence 4899999999999999987654322 2345666665554 2355554 56899999998865432 345
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceE
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKY 419 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~ 419 (438)
.+..++|+|+|||+|+|++|++.+++++++.|++++.+.+ ..+++||+|+||+.++...-- -..+....+.+
T Consensus 81 ~~~~i~v~p~~rg~G~g~~l~~~~~~~a~~~g~~~l~~~v~~~N~~s~~~y~k~GF~~~g~~~~~----~~~~g~~~D~~ 156 (169)
T d1yvoa1 81 VEHSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQV----GQKFGRWLDLT 156 (169)
T ss_dssp EEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE----EEETTEEEEEE
T ss_pred EEEEeecChhhhcCCeeeeeeeeeccccccccceEEEEEeccCcHHHHHHHhcCCcEEEEEEeeE----EEECCEEEEEE
Confidence 5668999999999999999999999999999999999888 589999999999999854211 01122234668
Q ss_pred EEEccCCC
Q 013702 420 YMKKLLPD 427 (438)
Q Consensus 420 ~~k~ll~~ 427 (438)
+|.+.|++
T Consensus 157 ~~~~~l~~ 164 (169)
T d1yvoa1 157 FMQLNLDP 164 (169)
T ss_dssp EEEEESCT
T ss_pred EEEEECCC
Confidence 88777753
|
| >d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside N-acetyltransferase AAC(6')-IY species: Salmonella enteritidis [TaxId: 149539]
Probab=99.69 E-value=2.7e-16 Score=134.71 Aligned_cols=124 Identities=16% Similarity=0.096 Sum_probs=98.5
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeec-------CCCeEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF-------KEKCGEV 345 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~-------~~~~~~I 345 (438)
.|.||+++.+|++.+.++...+++.... ......+...+ ...+++..+++++|++.+.... ....+++
T Consensus 2 ~m~Ir~~~~~d~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~~~i 80 (147)
T d1s3za_ 2 HMDIRQMNKTHLEHWRGLRKQLWPGHPD-DAHLADGEEILQADHLASFIAMADGVAIGFADASIRHDYVNGCDSSPVVFL 80 (147)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHSTTSCH-HHHHHHHHHHHHCSSEEEEEEEETTEEEEEEEEEEECSCCTTCSSSSEEEE
T ss_pred ceEEEECCHHHHHHHHHHHHHHCCCCCc-HHHHHHHHHHhhCCCcEEEEEEECCEEEEEEEEEeecCcccccCCCCeEEE
Confidence 4689999999999999998877544321 11122222222 3467888999999999876432 2367899
Q ss_pred EEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 346 AAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 346 ~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
..++|+|+|||+|||++|++.++++|++.|++.+.+.+ +.+.+||+|+||++++..
T Consensus 81 ~~l~V~~~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~fY~k~GF~~~~~~ 140 (147)
T d1s3za_ 81 EGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFEETERV 140 (147)
T ss_dssp EEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECHHHcCCcHHHHHHHHHHHHhhhccccceEEEEcCCCHHHHHHHHHCCCEEECeE
Confidence 99999999999999999999999999999999999988 478999999999987643
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Tetrahymena thermophila [TaxId: 5911]
Probab=99.69 E-value=3e-16 Score=138.63 Aligned_cols=144 Identities=14% Similarity=0.255 Sum_probs=108.8
Q ss_pred EEEECCccCHHHHHHHHHH---HHHcCcCCcCCHHHHHhhc-----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEE
Q 013702 279 GTRTAKVTDLSGIKQIIQP---LVESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 350 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~---~~~~~~~~~~~~e~l~~~~-----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V 350 (438)
.+|-++.+|.++...++.. .+...++ ..+.+.+.+.+ ..+++++.++++|||+.+.+..+...++|..++|
T Consensus 2 ~~r~i~~~d~~e~~~lL~~l~~if~~~lp-~~~~~y~~r~i~d~~~~~~~v~~~~g~iVG~~~~~~~~~~~~~ei~~laV 80 (162)
T d1qsra_ 2 DFDILTNDGTHRNMKLLIDLKNIFSRQLP-KMPKEYIVKLVFDRHHESMVILKNKQKVIGGICFRQYKPQRFAEVAFLAV 80 (162)
T ss_dssp EEEEECCCSCHHHHHHHHHHHHHHHHHCT-TSCHHHHHHHHTSTTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHhhCcCCcEEEEEEECCEEEEEEEEEEECCCCEEEEEEEEE
Confidence 5888888888876666544 3333332 33334443332 2467888899999999998777788999999999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccC
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLL 425 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll 425 (438)
+|+|||+|||++||++++++|++.|++.+++.+ ..+..||+|+||+..+ .+|...+..|-.+-.+.+.|..-+
T Consensus 81 ~p~~rg~GiG~~Ll~~l~~~a~~~g~~~i~l~~~~~a~~fY~k~GF~~~~--~~~~~~~~~~~k~y~~~~~M~~~l 154 (162)
T d1qsra_ 81 TANEQVRGYGTRLMNKFKDHMQKQNIEYLLTYADNFAIGYFKKQGFTKEH--RMPQEKWKGYIKDYDGGTLMECYI 154 (162)
T ss_dssp CGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHTTCBSSC--SSCHHHHBTTBCCCTTSEEEEEEC
T ss_pred cHHHccCchHHHHHHHHHHHHHhCCCeEEEEecCCccHHHHHhCCCeeec--cCChhHhcCcccCCCCeEEEEEec
Confidence 999999999999999999999999999999887 5789999999998644 345555555544445667775433
|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YsnE species: Bacillus subtilis [TaxId: 1423]
Probab=99.68 E-value=4.2e-17 Score=142.51 Aligned_cols=137 Identities=20% Similarity=0.265 Sum_probs=103.4
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC-------CcCCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL-------VRRTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 350 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~-------~~~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V 350 (438)
|.||..+.+| +++..|+......-.. .....+.+...-..+|+++.++++|||+.+.+. .++.++|..++|
T Consensus 1 M~I~~~~~~~-~~i~~L~~~~~~~~~~~~p~e~~~~l~~~~l~~~~~~~~va~~~~~~vG~~~~~~~-~~~~~~i~~~~V 78 (151)
T d1yx0a1 1 MHIKIDDLTG-RQVVSLVNEHLHSMTLMSPPESIHALGLEKLRGPEITFWSAWEGDELAGCGALKEL-DTRHGEIKSMRT 78 (151)
T ss_dssp CCEEEESSCC-HHHHHHHHHSSCCCCSCCCSSCCCCSCHHHHSSSSCEEEEEECSSSEEEEEEEEEE-ETTEEECCCCCC
T ss_pred CeeEECCCCC-HHHHHHHHHHHHHHHhcCCchhhhccCHhHccCCCeEEEEEEECCEEEEEEEEEec-cCceEEEEeeee
Confidence 3577777766 7777887654332111 112345555444578999999999999998854 457899999999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEc
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKK 423 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ 423 (438)
+|+|||+|+|++|+++++++|++.|++.+.+.| ..|++||+|+||++++.. ..|..+..+.+|.|.
T Consensus 79 ~p~~Rg~Glg~~Ll~~~~~~A~~~g~~~i~L~t~~~~~n~~A~~lY~k~GF~~~~~~-------~~y~~d~~~~~m~K~ 150 (151)
T d1yx0a1 79 SASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSMASFEPARKLYESFGFQYCEPF-------ADYGEDPNSVFMTKK 150 (151)
T ss_dssp STTTCCSCHHHHHHHHHHHHHHHHTCSCEECCCSSCTTHHHHHHHHHTTSEEECCCC-------TTSCCCTTCCCEEEC
T ss_pred CHHHHhCChhHHHHHHHHHHHHHCCCcEEEEEeccccchHHHHHHHHHcCCEECCcc-------CCCCCCCccEEEEEE
Confidence 999999999999999999999999999999975 368999999999998743 135556656544443
|
| >d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase SP0256 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.68 E-value=6.6e-17 Score=138.21 Aligned_cols=125 Identities=16% Similarity=0.111 Sum_probs=98.9
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPE 353 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~ 353 (438)
|++||+++..|++++.+|++....... ..+.+.+...+ ..++++++++++||++.+.. .....++|..++|+|+
T Consensus 1 Mi~Ir~~~~~d~~ei~~l~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~ivG~~~~~~-~~~~~~~i~~l~V~~~ 77 (137)
T d2atra1 1 MITIKKQEIVKLEDVLHLYQAVGWTNY--THQTEMLEQALSHSLVIYLALDGDAVVGLIRLVG-DGFSSVFVQDLIVLPS 77 (137)
T ss_dssp CEEEEEESCCCHHHHHHHHHTTCCCC-------CHHHHHHTSCSEEEEEEETTEEEEEEEEEE-CSSSEEEEEEEEECTT
T ss_pred CEEEEeCChhhHHHHHHHHHHcCCCCC--CCCHHHHHHHHhCCcEEEEEEECCEEEEEEEEEc-cCCceEEEEEEEEEHH
Confidence 478999999999999999875422211 22333444333 45788899999999998874 4567899999999999
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEeceeccc
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp 404 (438)
|||+|+|++|++++++.+++.++..+.+.+ ..+.+||+|+||+..+....+
T Consensus 78 ~rg~GiG~~Ll~~~~~~~~~~~~~~i~l~~~~~a~~fY~k~GF~~~~~~~~~ 129 (137)
T d2atra1 78 YQRQGIGSSLMKEALGNFKEAYQVQLATEETEKNVGFYRSMGFEILSTYDCT 129 (137)
T ss_dssp SCSSSHHHHHHHHHHGGGTTCSEEECCCCCCHHHHHHHHHTTCCCGGGGTCC
T ss_pred HcCchHHHHHHHHHHHHHHHCCCeEEEEeecHHHHHHHHhCCCEECccCCcc
Confidence 999999999999999999999988887766 678999999999988766443
|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase BC2806 species: Bacillus cereus [TaxId: 1396]
Probab=99.68 E-value=2.3e-16 Score=135.47 Aligned_cols=133 Identities=20% Similarity=0.204 Sum_probs=102.6
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 354 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~y 354 (438)
+.+|+..+.+|.+.|.+.+.......+.. .+.... ..++|+.+++++||++..... ...++|..++|+|+|
T Consensus 3 m~~i~~~t~~~~~~I~~~~~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~ivG~~~~~~~--~~~~~i~~l~V~~~~ 75 (140)
T d1y9wa1 3 MKHIENGTRIEGEYIKNKVIQYNMSILTD-----EVKQPMEEVSLVVKNEEGKIFGGVTGTMY--FYHLHIDFLWVDESV 75 (140)
T ss_dssp CCEEEECCHHHHHHHHHHHHHHHHHTSCG-----GGCCCCEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEEEEECGGG
T ss_pred cchhcCCcHHHHHHHHHHHHHHHHhhChH-----HHhCcccceEEEEEeCCCcEEEEEEEEEe--cCeeEEEEEEECccc
Confidence 35799999999999988876654443321 111112 235667778999999988753 467899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEcc
Q 013702 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 355 RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
||+|+|++||++++++|++.|++.+++.| ++|++||+|+||+.++...- | +.....++|.|.
T Consensus 76 rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~A~~fY~k~GF~~~g~~~~-------~-~~~~~~~~m~K~ 139 (140)
T d1y9wa1 76 RHDGYGSQLLHEIEGIAKEKGCRLILLDSFSFQAPEFYKKHGYREYGVVED-------H-PKGHSQHFFEKR 139 (140)
T ss_dssp TTTTHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHHHTTCEEEEEESS-------C-STTCCEEEEEEE
T ss_pred cCCCcHHHHHHHHHHHHHhccceEEEEeechhhHHHHHHhCCCEEEEEECC-------C-CCCCcEEEEEeE
Confidence 99999999999999999999999999988 57899999999999986421 1 224456777664
|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Tabtoxin resistance protein species: Pseudomonas syringae [TaxId: 317]
Probab=99.68 E-value=1.1e-15 Score=135.41 Aligned_cols=123 Identities=21% Similarity=0.303 Sum_probs=99.5
Q ss_pred EEEECCccCHH----HHHHHHHHHHHc----CcCCcCCHHHHHhhc-----------CcEEEEEECCEEEEEEEEeeecC
Q 013702 279 GTRTAKVTDLS----GIKQIIQPLVES----GALVRRTDEELLKAL-----------DSFYVVEREGQIIACAALFPFFK 339 (438)
Q Consensus 279 ~IR~at~~D~~----~I~~L~~~~~~~----~~~~~~~~e~l~~~~-----------~~~~V~~~dg~iVG~~~l~~~~~ 339 (438)
+||+++.+|++ .+.+++.+.... ++..+.+.++...++ ..++++..++++||++.+.+...
T Consensus 2 ~iR~~~~ed~~~~~~~l~~ll~d~~~~g~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~ 81 (170)
T d1ghea_ 2 QLRRVTAESFAHYRHGLAQLLFETVHGGASVGFMADLDMQQAYAWCDGLKADIAAGSLLLWVVAEDDNVLASAQLSLCQK 81 (170)
T ss_dssp EEEECCTTTHHHHHHHHHHHHHHHHHTTCCSSCCTTCCHHHHHHHHHTTHHHHHHTSEEEEEEEETTEEEEEEEEEECCS
T ss_pred ceEECCHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEECCEEEEEEEEeeccc
Confidence 69999999996 666666655443 344566766654432 24788899999999999876433
Q ss_pred C---CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHHCCCeEecee
Q 013702 340 E---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 340 ~---~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k~GF~~~g~~ 401 (438)
. ..++|..++|+|+|||+|+|++|++.++++|+++|++.+.+.+ +.+.+||+|+||+.++..
T Consensus 82 ~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~l~L~~~~n~~a~~fY~k~GF~~~g~~ 149 (170)
T d1ghea_ 82 PNGLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKHKRGLLHLDTEAGSVAEAFYSALAYTRVGEL 149 (170)
T ss_dssp TTCTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETTSHHHHHHHHTTCEEEEEE
T ss_pred cCCCcEEEEEEEEEcchhhcCCcHHHHHHHHHHHHHHcCCceEeeecccchHHHHHHHHCCCEEEEEe
Confidence 2 4689999999999999999999999999999999999998876 478999999999998863
|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Transcriptional regulator BH1968 species: Bacillus halodurans [TaxId: 86665]
Probab=99.66 E-value=6.8e-16 Score=132.78 Aligned_cols=123 Identities=15% Similarity=0.174 Sum_probs=95.4
Q ss_pred eEEEECCccCHHHHHHHHHHHH----HcCcCCcCCHHHHHh---h----cCcEEEEEECCEEEEEEEEeee-----cCCC
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLV----ESGALVRRTDEELLK---A----LDSFYVVEREGQIIACAALFPF-----FKEK 341 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~----~~~~~~~~~~e~l~~---~----~~~~~V~~~dg~iVG~~~l~~~-----~~~~ 341 (438)
++||+++++|++.|.+++.... ......+...+.... . -..+++++.++++||++.+... ....
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iiG~~~~~~~~~~~~~~~~ 81 (150)
T d1z4ea1 2 VTIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQGSW 81 (150)
T ss_dssp CEEEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHHHHCE
T ss_pred EEEEeCCHHHHHHHHHHHHHhhhhhccccccccchhHHHHHHHHHhcCCCcEEEEEEECCceEEEEEEEeecccCcCCCC
Confidence 5799999999999999986521 112222222222111 1 1357788899999999987642 2336
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
.++|..++|+|+|||+|||++|+++++++|++.|++.+.+.+ ..+.+||+|+||+..+.
T Consensus 82 ~~~i~~~~v~~~~rg~Gig~~l~~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~ 144 (150)
T d1z4ea1 82 RATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHE 144 (150)
T ss_dssp EEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTCEEEEE
T ss_pred EEEEEEEEcCHHHcCCChhHHHHHHHHHHHHHcCCCEEEEEEcCCCHHHHHHHHHCCCEEcce
Confidence 789999999999999999999999999999999999999988 46899999999998654
|
| >d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0244 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.66 E-value=5.8e-16 Score=134.79 Aligned_cols=126 Identities=19% Similarity=0.248 Sum_probs=98.3
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcC----CcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecC---CCeEEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGAL----VRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK---EKCGEVA 346 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~----~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~---~~~~~I~ 346 (438)
..+.||+++++|++.|.+|++..+..... .+.....+...+ ..+++++.++++||++.+.+... ....++.
T Consensus 3 ~~i~iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~vG~~~~~~~~~~~~~~~~~~~ 82 (161)
T d2ae6a1 3 TSLTIRLVAEADWPALHALDQIIWTKKNTPAEIQPLSLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLAAHQKQWLL 82 (161)
T ss_dssp CCEEEEECCGGGHHHHHHHHTTC-------------CCSHHHHHTTSSEEEEEEETTEEEEEEEEECSSSCGGGTTEEEE
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHhhhcCCcccCChhhHHHHHHhCCCCcEEEEEECCEEEEEEeecccccccccceEEEE
Confidence 34789999999999999998765433222 222333444443 46889999999999999875332 2457888
Q ss_pred EEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 347 AIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 347 ~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.++|+|+|||||+|++|++.+++++++.|++++.+.+ .++++||+|+||+..+..
T Consensus 83 ~~~v~~~~rg~Gig~~ll~~l~~~~~~~g~~~i~~~~~~~N~~a~~~y~~~GF~~~g~~ 141 (161)
T d2ae6a1 83 SIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHF 141 (161)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeeccccccccccchhheeeccccccchhheehhccccHHHHHHHHHCCCEEEEEE
Confidence 9999999999999999999999999999999998887 579999999999998854
|
| >d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase EF0945 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.65 E-value=2.1e-15 Score=133.77 Aligned_cols=126 Identities=24% Similarity=0.342 Sum_probs=100.7
Q ss_pred EEEECCccCHHHHHHHHHHHHHcCcC---CcCCHHHHHhhc-------------CcEEEEEECCEEEEEEEEeeecC---
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESGAL---VRRTDEELLKAL-------------DSFYVVEREGQIIACAALFPFFK--- 339 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~~~---~~~~~e~l~~~~-------------~~~~V~~~dg~iVG~~~l~~~~~--- 339 (438)
.||+++.+|+++|.+|+...+.+... .....+.+...+ ...+|++.+++++|++...+...
T Consensus 2 ~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~e~~~~i~g~~~~~~~~~~~~ 81 (189)
T d1u6ma_ 2 LIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEKI 81 (189)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTTT
T ss_pred EeeeCcHHHHHHHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHhCcccccccceEEEEEEcCeEEEEEEEeccccccc
Confidence 49999999999999999887765322 223333332221 24789999999999998764221
Q ss_pred ---------------------------CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHH
Q 013702 340 ---------------------------EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTAD 388 (438)
Q Consensus 340 ---------------------------~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~ 388 (438)
.+.++|..++|+|+|||+|+|++|+++++++|++.|++.+.+.+ +.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~ 161 (189)
T d1u6ma_ 82 IDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARK 161 (189)
T ss_dssp SSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHH
T ss_pred cchhhhhhhhhcccccccccccccccCCCEEEEEEEEECHHHcCCCcCcchhHHHHHHHHhcCCceeEEEEcCCCHHHHH
Confidence 14589999999999999999999999999999999999998888 46899
Q ss_pred HHHHCCCeEeceeccc
Q 013702 389 WFKSRGFRECSIEMIP 404 (438)
Q Consensus 389 fY~k~GF~~~g~~~lp 404 (438)
||+|+||+.++...++
T Consensus 162 ~Yek~GF~~~~~~~~~ 177 (189)
T d1u6ma_ 162 LYASKGFKDVTTMTIS 177 (189)
T ss_dssp HHHTTTCEEEEEEEET
T ss_pred HHHHCCCEEEEEEEEC
Confidence 9999999999876544
|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Glucosamine-phosphate N-acetyltransferase GNA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.64 E-value=7e-16 Score=133.42 Aligned_cols=124 Identities=19% Similarity=0.292 Sum_probs=92.9
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCH----HHHHhhc--------------CcEEEEEECCEEEEEEEEeeec-
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTD----EELLKAL--------------DSFYVVEREGQIIACAALFPFF- 338 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~----e~l~~~~--------------~~~~V~~~dg~iVG~~~l~~~~- 338 (438)
++||+++++|++.+.+++..+........... +...... ..+++...+++++|++.+....
T Consensus 5 ~~IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~ 84 (157)
T d1i12a_ 5 FYIRRMEEGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDNEDKKIMQYNPMVIVDKRTETVAATGNIIIERK 84 (157)
T ss_dssp EEEEECCGGGHHHHHHHHTTTSCCCCCCHHHHHHHHHHHHHCBCCCC---CCCBSBCCEEEEETTTTEEEEEEEEEEEEC
T ss_pred cEEEeCCHHHHHHHHHHHHHHhhccccCHHHHHHHHHhhhhhhhHHHhhhhcccccceEEEEEEECCEEEEEEEEecccc
Confidence 58999999999999999765432221111100 0111000 1234555689999999876432
Q ss_pred ----CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 339 ----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 339 ----~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
....++|..++|+|+|||+|+|++|+++++++|++.|++.+++.+ ..+++||+|+||+..+..
T Consensus 85 ~~~~~~~~~~i~~l~v~p~~rg~Gig~~L~~~~~~~a~~~g~~~i~l~~~~~~~~~Y~k~GF~~~g~~ 152 (157)
T d1i12a_ 85 IIHELGLCGHIEDIAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDEKNVKFYEKCGFSNAGVE 152 (157)
T ss_dssp SHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHTTCEEEEEE
T ss_pred ccccCcceeEEEEEEecHhhcCCCchHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHhCCCEEeeEE
Confidence 236789999999999999999999999999999999999999988 578999999999998765
|
| >d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase TTHA1209 species: Thermus thermophilus [TaxId: 274]
Probab=99.64 E-value=1.8e-15 Score=133.27 Aligned_cols=127 Identities=18% Similarity=0.191 Sum_probs=97.6
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC--------CcCCHHH----HHhhc------Cc-EEEEEECCEEEEEEEEeeec
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL--------VRRTDEE----LLKAL------DS-FYVVEREGQIIACAALFPFF 338 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~--------~~~~~e~----l~~~~------~~-~~V~~~dg~iVG~~~l~~~~ 338 (438)
+.||+++++|++.|.++..+.+...+. ...+.+. +.+.+ .. +++...++++|||+.+.+..
T Consensus 1 i~IR~a~~~D~~~i~~i~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~ 80 (174)
T d2cy2a1 1 VRIRRAGLEDLPGVARVLVDTWRATYRGVVPEAFLEGLSYEGQAERWAQRLKTPTWPGRLFVAESESGEVVGFAAFGPDR 80 (174)
T ss_dssp CCEEECCGGGHHHHHHHHHHHHHHHSBTTBCHHHHHHCCHHHHHHHHHHHHHCTTCCCEEEEEECTTSCEEEEEEEEECC
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHhcccCCHHHHhccChHHHHHHHHHHHhcCCCCceEEEEEEcCCEEEeeeeccccc
Confidence 469999999999999998876544321 1122222 11221 22 34445568999999987643
Q ss_pred C----CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccc
Q 013702 339 K----EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 339 ~----~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp 404 (438)
. ...++|..++|+|+|||+|+|++|++.++++|++.|++.+.+.+ +.+++||+|+||+..+....+
T Consensus 81 ~~~~~~~~~~i~~l~v~~~~rg~Gig~~ll~~~~~~a~~~g~~~~~l~v~~~N~~a~~~y~k~GF~~~g~~~~~ 154 (174)
T d2cy2a1 81 ASGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGGVLLGEREIE 154 (174)
T ss_dssp SCSCTTCCEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEEEEE
T ss_pred cccccCCceEEEEEEEcHHHhhCCCchHHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHCCCEEEeEEEEe
Confidence 2 35789999999999999999999999999999999999999988 578999999999999876544
|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.63 E-value=2.9e-15 Score=132.37 Aligned_cols=147 Identities=14% Similarity=0.187 Sum_probs=107.5
Q ss_pred eEEEECCccCHHHHHHHHH---HHHHcCcCCcCCHHHHHhhc-----CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQ---PLVESGALVRRTDEELLKAL-----DSFYVVEREGQIIACAALFPFFKEKCGEVAAIG 349 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~---~~~~~~~~~~~~~e~l~~~~-----~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~ 349 (438)
+++|.++.+|.++-..++. ..+...+ .....+.+...+ ..+++++.++++|||+.+.+..+.+.++|..++
T Consensus 2 ~~~r~i~~~~~~e~~~~L~~~~~if~~~l-p~~~~~~i~r~~~d~~~~~~~v~~~~~~iVG~~~~~~~~~~~~aeI~~la 80 (164)
T d1ygha_ 2 IEFRVVNNDNTKENMMVLTGLKNIFQKQL-PKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCA 80 (164)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHHCTTCEEEEEEETTTEEEEEEEEEEEGGGTEEEEEEEE
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHHHHc-CCccHHHHHHHHhccCCceEEEEEeCCeEEEEEEEEecCCCCEEEEEEEE
Confidence 4577778777665444433 3333322 233444444433 247788889999999998877777889999999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEE-ccCC
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMK-KLLP 426 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k-~ll~ 426 (438)
|+|+|||+|+|++||+++++++++.+...+.+.+ ..|.+||+|+||+.. ..+|...+..|..+..+.++|. ++.|
T Consensus 81 V~p~~rg~GiG~~L~~~l~~~~k~~~~~~~~~~~~n~~A~~fY~k~GF~~~--~~~~~~~~~gy~kd~e~~ilM~~~l~p 158 (164)
T d1ygha_ 81 ISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGFTKE--ITLDKSIWMGYIKDYEGGTLMQCSMLP 158 (164)
T ss_dssp ECTTCCCTTHHHHHHHHHHHHHHHHSCCCEEEEEECGGGHHHHHHTTCBSS--CCSCHHHHBTTBCCTTCCEEEEEECCC
T ss_pred ECchhccCHHHHHHHHHHHHHHHhhCceEEEEEecCHHHHHHHHhcCCEEe--cccchhhhcCcccCCCCeEEEEEEcCC
Confidence 9999999999999999999999987766666655 579999999999754 3356666666766666777775 6665
Q ss_pred C
Q 013702 427 D 427 (438)
Q Consensus 427 ~ 427 (438)
.
T Consensus 159 ~ 159 (164)
T d1ygha_ 159 R 159 (164)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Serotonin N-acetyltranferase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.63 E-value=1.8e-15 Score=132.09 Aligned_cols=128 Identities=17% Similarity=0.144 Sum_probs=103.2
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHc-CcCCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeec-------------
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF------------- 338 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~-~~~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~------------- 338 (438)
..+||+++++|++.|.++....+.. ....+++.+.+...+ ..+++++.+++++|++......
T Consensus 5 ~~~iR~~t~~D~~~l~~l~~~~f~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~ 84 (166)
T d1cjwa_ 5 ANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHR 84 (166)
T ss_dssp SSEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEETTEEEEEEEEEEECSSSCCGGGGGCCC
T ss_pred hHHhccCCHHHHHHHHHHHHHhCCcccccCcccHHHHhhhhhcCCceEEEEEECCceeeeecccccccccchhhhhhccc
Confidence 3679999999999999998876533 223556777666554 4689999999999998765321
Q ss_pred -CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHC-CCCEEEEEc-HHHHHHHHHCCCeEeceeccc
Q 013702 339 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL-GLDMLFLLT-TRTADWFKSRGFRECSIEMIP 404 (438)
Q Consensus 339 -~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~-g~~~l~l~t-~~a~~fY~k~GF~~~g~~~lp 404 (438)
..+.++|..++|+|+|||+|+|+.||+.+++++++. ++..+.+.+ ..+++||+|+||+.++..+..
T Consensus 85 ~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~~~~~~i~l~~~~~ai~fY~k~GF~~~G~~~~~ 153 (166)
T d1cjwa_ 85 PRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCAIV 153 (166)
T ss_dssp TTCCEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHTSTTCCEEEEEECGGGHHHHHTTTEEEEEECSCC
T ss_pred CCCCEEEEEEEEECHHHccCCHHHHHHHHHHHHHHHhCCCceEEEecCHHHHHHHHHCCCEEEcceeeE
Confidence 236899999999999999999999999999988765 677787776 678999999999999976543
|
| >d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2290 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.63 E-value=4.3e-15 Score=129.25 Aligned_cols=144 Identities=15% Similarity=0.250 Sum_probs=107.8
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCc----CCcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecCC---Ce
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGA----LVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKE---KC 342 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~----~~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~~---~~ 342 (438)
.+.||+++++|++.+.+++........ ....+.+....++ ..+++++.++++||++.+.+.... ..
T Consensus 2 ~i~iR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~~~~ 81 (164)
T d2ge3a1 2 TVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIENDHPQFVAIADGDVIGWCDIRRQDRATRAHC 81 (164)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHTTCSSCSSSSCCCHHHHHHHHHHHHHTTCCEEEEEETTEEEEEEEEEECCSTTTTTE
T ss_pred cEEEEECCHHHHHHHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHHhhcCCceEEEEEECCEEEEEEEeeccccCCcCcE
Confidence 368999999999999999887655432 2333444444433 457889999999999998865332 23
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCce
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSK 418 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~ 418 (438)
+++ .++|+|+|||+|+|++|++.++++|+++|++++.+.+ ..+.+||+|+||+..+...- ...++..-.+.
T Consensus 82 ~~~-~~~v~~~~rg~Gig~~l~~~~~~~a~~~~~~~i~~~v~~~N~~s~~~y~k~GF~~~g~~~~----~~~~~g~~~D~ 156 (164)
T d2ge3a1 82 GTL-GMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARD----AVSIDGHYIDS 156 (164)
T ss_dssp EEE-EEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEE----EEESSSCEEEE
T ss_pred EEE-EEEeChhhccccccccchhhhhheeccccccccccccCcchHHHHHHHHHCCCEEEEEEec----EEEECCEEEEE
Confidence 445 6899999999999999999999999999999999988 58999999999999875420 01223333466
Q ss_pred EEEEccC
Q 013702 419 YYMKKLL 425 (438)
Q Consensus 419 ~~~k~ll 425 (438)
++|-.++
T Consensus 157 ~~~~~l~ 163 (164)
T d2ge3a1 157 LNMAIIF 163 (164)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7776554
|
| >d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable spermine/spermidine acetyltransferase EF1086 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.61 E-value=2.4e-16 Score=135.73 Aligned_cols=125 Identities=11% Similarity=0.050 Sum_probs=94.5
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHh----hcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEEC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLK----ALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVS 351 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~----~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~ 351 (438)
|.++||+++++|++.+.++........+.. ...+.+.. .-..++++..++++||++.+.+. .+..++|..++|+
T Consensus 1 M~i~ir~~t~~d~~~i~~l~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~i~~~~~~vG~~~~~~~-~~~~~~i~~~~v~ 78 (146)
T d2fl4a1 1 MEIHFEKVTSDNRKAVENLQVFAEQQAFIE-SMAENLKESDQFPEWESAGIYDGNQLIGYAMYGRW-QDGRVWLDRFLID 78 (146)
T ss_dssp CCCCCCCCCTTTHHHHHTCCCTTCHHHHHH-HHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEECCHHHHHHHHHHHccccchhhhh-hHHHHHHHHhhCCCeEEEEEEECCEEEEEEEEEEc-CCCeEEEeeEEEc
Confidence 346799999999999998843322221110 01111111 11346788899999999999854 4577899999999
Q ss_pred ccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 352 PECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 352 p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
|+|||+|||++|++.+++++ +..+++.+.+.+ .++++||+|+||+.++..+
T Consensus 79 ~~~rgkGiG~~ll~~~~~~~~~~~~~~~i~l~v~~~N~~a~~~Y~k~GF~~~g~~~ 134 (146)
T d2fl4a1 79 QRFQGQGYGKAACRLLMLKLIEKYQTNKLYLSVYDTNSSAIRLYQQLGFVFNGELD 134 (146)
T ss_dssp GGGTTSSHHHHHHHHHHHHHHHHSSCSEEEEEECTTCHHHHHHHHHTTCEEEEEEC
T ss_pred HHHcCCChhhhhhhhhccccccccCceEEEeecccccHHHHHHHHHCCCEEeeEEe
Confidence 99999999999999998877 457999999887 4799999999999998643
|
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.8e-14 Score=126.98 Aligned_cols=108 Identities=16% Similarity=0.245 Sum_probs=90.7
Q ss_pred CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCC
Q 013702 317 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGF 395 (438)
Q Consensus 317 ~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF 395 (438)
..++++.+++++||++.+.++.+.+.++|..++|+|+|||||+|++||+++++++++.|++.+++.+ +.|.+||+|+||
T Consensus 52 ~~~~v~~~~~~iIG~i~~~~~~~~~~aeI~~laV~~~~qgkGiG~~Lm~~l~~~~~~~g~~~i~~~~~~~A~~fY~k~GF 131 (162)
T d1z4ra1 52 HKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGF 131 (162)
T ss_dssp CEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHTTE
T ss_pred ceEEEEEECCEEEEEEEEEEECCCCEEEEEEEEEChhhhhhhHHHHHHHHHHHHHHHCCCcEEEEecCcchHHHHHhCCC
Confidence 4578888999999999999888888999999999999999999999999999999999999999887 679999999999
Q ss_pred eEeceeccchHhhhhhcCCCCceEEE-EccCC
Q 013702 396 RECSIEMIPEERRKRINLSRNSKYYM-KKLLP 426 (438)
Q Consensus 396 ~~~g~~~lp~~~~~~y~~~r~s~~~~-k~ll~ 426 (438)
+.. ..+|...|..|-.+-.+..+| +++.|
T Consensus 132 ~~~--~~~~~~~~~~~ikdy~~~~lm~~~~~p 161 (162)
T d1z4ra1 132 SKD--IKVPKSRYLGYIKDYEGATLMECELNP 161 (162)
T ss_dssp ESC--CCSCHHHHTTTSCCCTTCEEEEEECCC
T ss_pred eEe--ccCchhHhcCCccCCCCeEEEEEecCC
Confidence 763 336777777665444455555 55544
|
| >d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YitI species: Bacillus licheniformis [TaxId: 1402]
Probab=99.61 E-value=5.4e-15 Score=127.95 Aligned_cols=120 Identities=16% Similarity=0.188 Sum_probs=89.0
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCc--CCHHHHHhhcCcEEEEEECCEEEEEEEEeeec-----CCCeEEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVR--RTDEELLKALDSFYVVEREGQIIACAALFPFF-----KEKCGEVAAIGV 350 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~--~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~-----~~~~~~I~~v~V 350 (438)
++||+++.+|.-.+.. .......... ...++. ......++++.++++|||+.+.... ....++|..++|
T Consensus 1 ~ei~~i~~~e~~~lR~---~vLr~~~~~~~~~~~~d~-~~~~~h~~a~~~~~iVg~~~~~~~~~~~~~~~~~~~l~~l~V 76 (145)
T d2jdca1 1 IEVKPINAEDTYELRH---RILRPNQPIEACMFESDL-LRGAFHLGGYYGGKLISIASFHQAEHSELQGQKQYQLRGMAT 76 (145)
T ss_dssp CEEEEECGGGGHHHHH---HHTCTTSCGGGGSCGGGG-STTCEEEEEEETTEEEEEEEEEECCCTTSCCSSEEEEEEEEE
T ss_pred CEEEEcCHHHHHHHHH---HHhcCCCChhhccCCccC-CCCcEEEEEEeCCEEEEEEEEEeccccccCCCCeEEEEEEEE
Confidence 4689999888655532 2111111100 111111 1113357889999999999987532 346788999999
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
+|+|||+|+|++|+++++++|++.|++.+++.+ ..+.+||+|+||+.++..
T Consensus 77 ~~~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~A~~fY~k~GF~~~g~~ 128 (145)
T d2jdca1 77 LEGYREQKAGSSLIKHAEEILRKRGADLLWCNARTSASGYYKKLGFSEQGEV 128 (145)
T ss_dssp CTTSTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHHTTCEEEEEE
T ss_pred eHHHhhhhHHHHHHHHHHHHHHHcCCCEEEEeccchHHHHHHHCCCEEeCcE
Confidence 999999999999999999999999999999987 579999999999999854
|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: IAA acetyltransferase species: Bacillus cereus [TaxId: 1396]
Probab=99.61 E-value=1e-14 Score=127.13 Aligned_cols=115 Identities=21% Similarity=0.297 Sum_probs=93.0
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccc
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPEC 354 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~y 354 (438)
.+.|+.+.++++|.-.-+.. ..+.+.+...+ +.+|++++++++||++.+.+ ..++.++|..++|+|+|
T Consensus 2 ~~~ie~i~~~~~P~~ll~~a---------Dp~~~~i~~yl~~~~~~v~~~~g~ivG~~~~~~-~~~~~~~i~~l~V~p~~ 71 (152)
T d1y9ka1 2 SVVIERIPKEAIPKSLLLLA---------DPSERQIATYVQRGLTYVAKQGGSVIGVYVLLE-TRPKTMEIMNIAVAEHL 71 (152)
T ss_dssp CCEEEEECGGGCCHHHHHHH---------CCCHHHHHHHHHHSEEEEEECSSSEEEEEEEEE-CSTTEEEEEEEEECGGG
T ss_pred ceEEEecChhhCChhHHhcc---------CCCHHHHHHHhcCCeEEEEEECCEEEEEEEEEE-cCCCEEEEEEEEEcHHH
Confidence 45788888888885332211 11233444333 56899999999999998874 46788999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 355 RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
||+|+|++|+++++++|++.|++.+.+.| ..+++||+|+||+.++..
T Consensus 72 rg~GiG~~Ll~~~~~~a~~~g~~~i~l~t~~~n~~a~~fY~k~GF~~~~~~ 122 (152)
T d1y9ka1 72 QGKGIGKKLLRHAVETAKGYGMSKLEVGTGNSSVSQLALYQKCGFRIFSID 122 (152)
T ss_dssp CSSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcchHHHHHHHHHHHHcCCceEEEEeccCCHHHHHHHHHCCCEEEeEE
Confidence 99999999999999999999999999987 478999999999998864
|
| >d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2161 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.61 E-value=6.3e-15 Score=125.44 Aligned_cols=113 Identities=12% Similarity=0.126 Sum_probs=88.9
Q ss_pred CCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcH
Q 013702 283 AKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQ 359 (438)
Q Consensus 283 at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGi 359 (438)
....+.+++.+|... ....+++.+.....+ ..++++++++++|||+.+. ......++|..++|+|+|||||+
T Consensus 6 ~~~p~~e~~~~Lr~~----~g~~~~s~e~~~~~l~~s~~~~~~~~~~~~vG~~~~~-~~~~~~~~i~~l~V~p~~rg~Gi 80 (133)
T d1y7ra1 6 YDIPTCEDYCALRIN----AGMSPKTREAAEKGLPNALFTVTLYDKDRLIGMGRVI-GDGGTVFQIVDIAVLKSYQGQAY 80 (133)
T ss_dssp CSCCCHHHHHHHHHH----TTCCCCCHHHHHHHGGGCSEEEEEEETTEEEEEEEEE-ECSSSEEEEEEEEECGGGCSSSH
T ss_pred cCCCCHHHHHHHHHH----cCcCCCCHHHHHHHhcCCeEEEEEEECCEEEEEEEEE-eccCCEEEEEEEEEeecccchHH
Confidence 333466666666432 234466777777665 2466788999999999886 34567899999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHHCCCeEece
Q 013702 360 GDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSI 400 (438)
Q Consensus 360 G~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k~GF~~~g~ 400 (438)
|++|+++++++++++|++.+.+.+ +.+.+||+|+||++.+.
T Consensus 81 G~~Ll~~~~~~~~~~g~~~~~l~~~a~~~a~~fY~k~GF~~~~~ 124 (133)
T d1y7ra1 81 GSLIMEHIMKYIKNVSVESVYVSLIADYPADKLYVKFGFMPTEP 124 (133)
T ss_dssp HHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHHHTTTCEECTT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEcCChHHHHHHHHCCCEEeCC
Confidence 999999999999999998766554 57899999999998754
|
| >d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase PA4026 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.59 E-value=3.4e-15 Score=128.82 Aligned_cols=122 Identities=20% Similarity=0.180 Sum_probs=94.7
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--------C--cEEEEEECCEEEEEEEEeeecC----CCeE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--------D--SFYVVEREGQIIACAALFPFFK----EKCG 343 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--------~--~~~V~~~dg~iVG~~~l~~~~~----~~~~ 343 (438)
|+||.++.+|++.|.+|+..+... +..+...+....++ . .++++++++++||++.+.+... ...+
T Consensus 1 M~Ir~a~~~D~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~ 79 (153)
T d2euia1 1 MRIVQATLEHLDLLAPLFVKYREF-YGMLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSLSLKRVW 79 (153)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETTTTEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHhCCCCcEEEEEEecCCeEEEEEeeecccccccccceE
Confidence 579999999999999998875432 12222333332222 1 2344456799999998865322 3567
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
+|..++|+|++||+|+|++|+++++++|++.|++.+.+.| .++++||+|+||+..+.
T Consensus 80 ~i~~~~V~~~~r~~Gig~~Ll~~~~~~ak~~g~~~i~l~~~~~N~~a~~~Y~k~GF~~~~~ 140 (153)
T d2euia1 80 ILNDIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGFREDQE 140 (153)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTCBCCCS
T ss_pred EecceeeeecccCcchhhHHHHHHhhhHHHhhhccceEEecCCCHHHHHHHHHCCCEEcce
Confidence 8999999999999999999999999999999999999998 58999999999997543
|
| >d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase YycN species: Bacillus subtilis [TaxId: 1423]
Probab=99.59 E-value=3e-15 Score=128.08 Aligned_cols=123 Identities=13% Similarity=0.179 Sum_probs=94.1
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC--CcC--------CHHHHHhhc-------C--cEEEEEECCEEEEEEEEeeec
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL--VRR--------TDEELLKAL-------D--SFYVVEREGQIIACAALFPFF 338 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~--~~~--------~~e~l~~~~-------~--~~~V~~~dg~iVG~~~l~~~~ 338 (438)
+.|||++++|++.+.++....+..... ..+ ..+.+..++ . .+++...+++++|++.+....
T Consensus 2 i~lRp~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~ 81 (155)
T d1ufha_ 2 IMLTPMQTEEFRSYLTYTTKHYAEEKVKAGTWLPEDAQLLSKQVFTDLLPRGLETPHHHLWSLKLNEKDIVGWLWIHAEP 81 (155)
T ss_dssp CEEEECCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCTTGGGSTTEEEEEEESSSSCEEEEEEEEECT
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhcCCCcEEEEEEEcCCeEEEEEEEEeec
Confidence 579999999999999997654322110 111 122333322 1 133445678999999887543
Q ss_pred --CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 339 --KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 339 --~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
..+.++|..++|+|+|||||+|+.|++.+++++++.|++.+.+.| .++.+||+|+||++++.
T Consensus 82 ~~~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~ 149 (155)
T d1ufha_ 82 EHPQQEAFIYDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQETDV 149 (155)
T ss_dssp TCTTCEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHTTCCCCCC
T ss_pred cCCCCceEEEEEEEEHHHcCCcccchHHHHHHHHhhhcCCceeEEEEcCCCHHHHHHHHHCCCEEEeE
Confidence 347889999999999999999999999999999999999999988 57899999999998874
|
| >d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HPA2 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.59 E-value=5.1e-15 Score=127.18 Aligned_cols=121 Identities=17% Similarity=0.208 Sum_probs=92.3
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHH---hhc----C----cEEEEEECCEEEEEEEEeeecC----CC
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELL---KAL----D----SFYVVEREGQIIACAALFPFFK----EK 341 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~---~~~----~----~~~V~~~dg~iVG~~~l~~~~~----~~ 341 (438)
.++||+++++|.+.+.+|+..+... +..+.+.+... .++ . .+++...++.+||++.+.+... ..
T Consensus 2 ~i~IR~~~~~D~e~~~~L~~~y~~f-y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivg~~~~~~~~~~~~~~~ 80 (150)
T d1qsma_ 2 NITVRFVTENDKEGWQRLWKSYQDF-YEVSFPDDLDDFNFGRFLDPNIKMWAAVAVESSSEKIIGMINFFNHMTTWDFKD 80 (150)
T ss_dssp CEEEEECCGGGHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHHHCTTSCEEEEEEEESSSCCEEEEEEEEEECCTTCSSC
T ss_pred CeEEEECCHHHHHHHHHHHHHHHHH-hcccCchHHHHHHHHHHhCCCcccceeeeehhhcCcEEEEEEEeeccccccccc
Confidence 4789999999999999998764332 11223333222 111 1 1233344688999998875432 35
Q ss_pred eEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEe
Q 013702 342 CGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 398 (438)
Q Consensus 342 ~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~ 398 (438)
.++|..++|+|++||+|+|++|++.++++|+++|++.+.+.| ++|++||+|+||+..
T Consensus 81 ~~~l~~l~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GFk~~ 141 (150)
T d1qsma_ 81 KIYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYKAP 141 (150)
T ss_dssp EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHEEECS
T ss_pred hheehhhhhhhcccCccHHHHHHHHHHhhhcccccccceeEEccCCHHHHHHHHHcCCCCc
Confidence 788999999999999999999999999999999999999988 589999999999854
|
| >d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=3.5e-15 Score=130.23 Aligned_cols=123 Identities=21% Similarity=0.235 Sum_probs=95.1
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCc---CCcCCHHHHHhhc------CcE--------EEEEECCEEEEEEEEeeecC-
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGA---LVRRTDEELLKAL------DSF--------YVVEREGQIIACAALFPFFK- 339 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~---~~~~~~e~l~~~~------~~~--------~V~~~dg~iVG~~~l~~~~~- 339 (438)
++||+++++|.+.|.+|++....... ....+.+++.... ... ++...++.+||++.+.+..+
T Consensus 2 f~IR~at~~D~~~i~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~ 81 (167)
T d2b5ga1 2 FVIRPATAADCSDILRLIKELAKYEYMEEQVILTEKDLLEDGFGEHPFYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDP 81 (167)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHTCC----CCCCCHHHHHHHHSSSSCSCEEEEEECCGGGCCTTCCCEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhccccchhhhhhhhccCceeEEeeCCeEEEEEEEEeeccc
Confidence 47999999999999999987543211 1234555554432 111 22334678999998776432
Q ss_pred --CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 340 --EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 340 --~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
....++..++|+|+|||+|+|++|+++++++|+++|++.+.+.| +++++||+|+||+.++.
T Consensus 82 ~~~~~~~i~~l~v~~~~rg~Gig~~L~~~l~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~~~~~ 148 (167)
T d2b5ga1 82 WIGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGASDLSS 148 (167)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTTTCEEHHH
T ss_pred ccccceecceeeeeeccccCCCchhhhhhhhhhhcccCcceeeeecccCcHHHHHHHHHCCCEECcE
Confidence 24678889999999999999999999999999999999999988 58999999999999764
|
| >d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YjcF species: Bacillus subtilis [TaxId: 1423]
Probab=99.57 E-value=1.3e-14 Score=124.87 Aligned_cols=119 Identities=20% Similarity=0.217 Sum_probs=93.2
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcCCc--CCHHHHHhhcCcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCC
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGALVR--RTDEELLKALDSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQ 357 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~~~--~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgq 357 (438)
+..-+.+++..+.++....+......+ ...+.+. ....+++++.++++||++.+.+ .++.++|..++|+|+|||+
T Consensus 4 ~~~~~~~el~~~~~iR~~VF~~Eq~ip~~~e~D~~D-~~~~h~v~~~~~~~vg~~~~~~--~~~~~~i~~l~V~~~~rg~ 80 (140)
T d1q2ya_ 4 VIAKNEEQLKDAFYVREEVFVKEQNVPAEEEIDELE-NESEHIVVYDGEKPVGAGRWRM--KDGYGKLERICVLKSHRSA 80 (140)
T ss_dssp EEECSHHHHHHHHHHHHHHHTTTSCCCTTTTCCTTG-GGSEEEEEEETTEEEEEEEEEE--ETTEEEEEEEECCGGGTTT
T ss_pred EEcCCHHHHHHHHHHHHHHeeeccCCChhhhcCCCC-cccEEEEEeccccEEEEEeeec--ccceeeEeeeEEchhhcCC
Confidence 344567778888888777654432212 1112221 2245688999999999999975 4578999999999999999
Q ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 358 GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 358 GiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
|+|++|++++++++++.|++.+++.+ +.+..||+|+||+.++..
T Consensus 81 GiG~~Ll~~~~~~a~~~g~~~i~l~a~~~a~~fY~k~GF~~~~~~ 125 (140)
T d1q2ya_ 81 GVGGIIMKALEKAAADGGASGFILNAQTQAVPFYKKHGYRVLSEK 125 (140)
T ss_dssp THHHHHHHHHHHHHHHTTCCSEEEEEEGGGHHHHHHTTCEESCSC
T ss_pred cHHHHHHHHHHHHHHHcCCCceEEeCCHHHHHHHHHCcCEEcCCe
Confidence 99999999999999999999999987 678999999999998753
|
| >d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Diamine acetyltransferase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=2.5e-14 Score=124.07 Aligned_cols=123 Identities=24% Similarity=0.265 Sum_probs=92.8
Q ss_pred eEEEECCccCHHHHHHHHHHHHH---cCcCCcCCHHHHHhhc------CcE--------EEEEECCEEEEEEEEeeec--
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVE---SGALVRRTDEELLKAL------DSF--------YVVEREGQIIACAALFPFF-- 338 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~---~~~~~~~~~e~l~~~~------~~~--------~V~~~dg~iVG~~~l~~~~-- 338 (438)
+.||+++++|++.|.+|++.... ......++.+++...+ ... .+...++.++|++.+.+..
T Consensus 2 i~IR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (167)
T d2beia1 2 VRIREAKEGDCGDILRLIRELAEFEKLSDQVKISEEALRADGFGDNPFYHCLVAEILPAPGKLLGPCVVGYGIYYFIYST 81 (167)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHTC----CCCHHHHHHHHHSSSCSCEEEEEEEC-------CCEEEEEEEEEEEEET
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHHhhccccchhhhhhhhcccccceeecceeeeEEEeeccccc
Confidence 68999999999999999876422 2233455666665433 111 2234467888888766432
Q ss_pred -CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEece
Q 013702 339 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 339 -~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
..+..++..++|+|+|||+|||++|+++++++|++.|++.+.+.| .++++||+|+||+.++.
T Consensus 82 ~~~~~~~i~~~~v~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~N~~A~~~Y~k~GF~~~~~ 148 (167)
T d2beia1 82 WKGRTIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQDLTE 148 (167)
T ss_dssp TTEEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEHHH
T ss_pred ccccceeccceecCHhhcCCCcchhhHHHHHHHHhhhcccccceeeccCCHHHHHHHHHCCCEEccE
Confidence 236778899999999999999999999999999999999999988 58999999999999864
|
| >d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase Atu2258 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.57 E-value=9.2e-15 Score=125.13 Aligned_cols=96 Identities=19% Similarity=0.145 Sum_probs=80.0
Q ss_pred EEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc--HHHHHHHHHCCCe
Q 013702 319 FYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT--TRTADWFKSRGFR 396 (438)
Q Consensus 319 ~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t--~~a~~fY~k~GF~ 396 (438)
+++...++++||++..... .+.++|..++|+|+|||||+|++|+++++++|++.|+..+++.+ +.+.+||+|+||+
T Consensus 39 ~~v~d~~g~ivG~~~~~~~--~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~~~n~~a~~fY~k~GF~ 116 (137)
T d2g3aa1 39 ITIRNDDNSVTGGLVGHTA--RGWLYVQLLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTMNPDALRTYERYGFT 116 (137)
T ss_dssp EEEECTTCCEEEEEEEEEE--TTEEEEEEEECCGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTCE
T ss_pred EEEEeCCCCEEEEEEEEEe--CCeEEEEEEEEChhhcCCChHHHHHHHHHHHHHHcCCceEEEecccHhhHHHHHhCCCE
Confidence 4555668899999987743 46789999999999999999999999999999999999999987 5799999999999
Q ss_pred EeceeccchHhhhhhcCCCCceEEEEcc
Q 013702 397 ECSIEMIPEERRKRINLSRNSKYYMKKL 424 (438)
Q Consensus 397 ~~g~~~lp~~~~~~y~~~r~s~~~~k~l 424 (438)
.++...- | ++..+.++|+|-
T Consensus 117 ~~g~~~~-------~-~~~~~~~~m~K~ 136 (137)
T d2g3aa1 117 KIGSLGP-------L-SSGQSITWLEKR 136 (137)
T ss_dssp EEEEECC-------C-TTSCCEEEEEEE
T ss_pred EEEEECC-------C-CCCCcEEEEEEE
Confidence 9986421 1 234667888764
|
| >d2akoa1 c.73.1.3 (A:2-251) Glutamate 5-kinase {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Glutamate 5-kinase species: Campylobacter jejuni [TaxId: 197]
Probab=99.56 E-value=6.8e-16 Score=145.52 Aligned_cols=136 Identities=18% Similarity=0.167 Sum_probs=105.4
Q ss_pred eEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccC
Q 013702 64 EVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFL 136 (438)
Q Consensus 64 ~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l 136 (438)
.......+.+..+++.+.+||+++......++.++.++|++|+.+|..++|++|+|+|||+|++ +++++|+++
T Consensus 104 ~~~~~~~~~~~~~l~~~~ipv~~~~~~~~~~~~~~~~~D~~A~~lA~~~~a~~li~~tdVdGVyd~dP~~~~~Ak~i~~I 183 (250)
T d2akoa1 104 KATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKI 183 (250)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTTTCCHHHHBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEE
T ss_pred hhhhhhhHHHHHHHHhCcccccccCccccccccccccchhhHHHHHHhcccceeeeccCCCceeeCCCcccccccchhhc
Confidence 3344567889999999999999988777777889999999999999999999999999999983 457899999
Q ss_pred CH--HHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccc
Q 013702 137 TL--QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQG 214 (438)
Q Consensus 137 ~~--~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~ 214 (438)
+. ++..++... .++.+++| |
T Consensus 184 t~~~~~~~~~~~~--------------------------------------------------~~s~~~tG-G------- 205 (250)
T d2akoa1 184 THIKEEWLQATIK--------------------------------------------------TGSEHGTG-G------- 205 (250)
T ss_dssp SCCCGGGC-----------------------------------------------------------CBSC-H-------
T ss_pred cccchHHhhhhcc--------------------------------------------------cCCCCCCC-c-------
Confidence 85 222222111 11222344 4
Q ss_pred ccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcC-CCcccc
Q 013702 215 FAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRD-GMGTMV 272 (438)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~-g~GT~i 272 (438)
|.+||++|..|.++|++ ++|+||+.++.+...+++++ ..||.|
T Consensus 206 --------------M~~Kl~aa~~~~~~gi~-v~I~nG~~~~~l~~~l~~~~~~~GTv~ 249 (250)
T d2akoa1 206 --------------IVTKLKAAKFLLEHNKK-MFLASGFDLSVAKTFLLEDKQIGGTLF 249 (250)
T ss_dssp --------------HHHHHHHHHHHHHTTCE-EEEEESSSCHHHHHHHHSCCCCSSEEE
T ss_pred --------------hHHHHHHHHHHHHCCCC-EEEecCCCccHHHHHHhCCCCCCceEe
Confidence 99999999999999995 99999999998777776654 468976
|
| >d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein YvbK (BSu33890) species: Bacillus subtilis [TaxId: 1423]
Probab=99.56 E-value=5.9e-14 Score=122.26 Aligned_cols=109 Identities=17% Similarity=0.222 Sum_probs=88.5
Q ss_pred ccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHH
Q 013702 285 VTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDK 362 (438)
Q Consensus 285 ~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~ 362 (438)
+...+++.+++... ..+.+.+...+ +.+|+++.++++||++.+.+. ....+++..++|+|+|||+|+|++
T Consensus 8 ~~~~d~~~dlLl~a-------d~~~~~i~~~~~~~~~~v~~~~g~ivG~~~~~~~-~~~~~~l~~i~V~p~~rg~Gig~~ 79 (152)
T d1yvka1 8 EETNDELYDLLLLA-------DPSKDIVDEYLERGECYTAWAGDELAGVYVLLKT-RPQTVEIVNIAVKESLQKKGFGKQ 79 (152)
T ss_dssp CCCCHHHHHHHHHH-------CCCHHHHHHHHHHSEEEEEEETTEEEEEEEEEEC-STTEEEEEEEEECGGGTTSSHHHH
T ss_pred cccchhHHHHHHcc-------CCCHHHHHHHHhCCeEEEEEECCEEEEEEEEEec-CCCEEEEEEeeeCHhHcCCCcccH
Confidence 34445666664322 12344555443 578999999999999999854 567899999999999999999999
Q ss_pred HHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 363 LLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 363 Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
|+++++++|++.|++.+.+.| ..+++||+|+||+..+..
T Consensus 80 Ll~~~~~~a~~~g~~~~~l~~~~~n~~a~~fYek~GF~~~~~~ 122 (152)
T d1yvka1 80 LVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKCGFRIQAID 122 (152)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhhhhcccccceeeccCCHHHHHHHHHCCCEEEEEE
Confidence 999999999999999999988 478999999999999865
|
| >d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH1933 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.53 E-value=2.2e-14 Score=123.26 Aligned_cols=84 Identities=18% Similarity=0.251 Sum_probs=70.8
Q ss_pred CcEEEEEECCEEEEEEEEeeec-----CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHH
Q 013702 317 DSFYVVEREGQIIACAALFPFF-----KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTA 387 (438)
Q Consensus 317 ~~~~V~~~dg~iVG~~~l~~~~-----~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~ 387 (438)
..++++..|++++|++.+.+.. ....++|..++|+|+|||+|+|++|+++++++|++.+.+.. +.+ .+++
T Consensus 55 ~~~~v~~~~~~~vg~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~~~~~-~~v~~~N~~a~ 133 (157)
T d1wwza1 55 DGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDTIE-LWVGEKNYGAM 133 (157)
T ss_dssp GGEEEEEETTEEEEEEEEEEEEEETTTTEEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHTTCSEEE-EEEETTCHHHH
T ss_pred CeEEEEEECCEEEEEEEeeccccccccCCcEEEEEEEEEEehhccchhHHHHHHHHHHHHHHhCCceE-EEEcCCCHHHH
Confidence 5688999999999999876431 12567899999999999999999999999999999886543 334 5899
Q ss_pred HHHHHCCCeEecee
Q 013702 388 DWFKSRGFRECSIE 401 (438)
Q Consensus 388 ~fY~k~GF~~~g~~ 401 (438)
+||+|+||++++..
T Consensus 134 ~~Y~k~GF~~~g~~ 147 (157)
T d1wwza1 134 NLYEKFGFKKVGKS 147 (157)
T ss_dssp HHHHHTTCEEEEEE
T ss_pred HHHHHCCCEEEeEE
Confidence 99999999999865
|
| >d2brxa1 c.73.1.3 (A:1-225) Uridylate kinase PyrH {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.51 E-value=1.2e-14 Score=134.65 Aligned_cols=124 Identities=17% Similarity=0.182 Sum_probs=97.2
Q ss_pred CHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHH
Q 013702 69 DVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEA 141 (438)
Q Consensus 69 ~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~ 141 (438)
+......+++.+.|||++.... ..++|++|+.+|.+|+||+|+|+|||+|++ +++++|++++.+|+
T Consensus 95 ~~~~~~~~l~~~~ipv~~~~~~-------~~~~D~lAa~lA~~l~Ad~lii~TDVdGVyt~dP~~~~~Ak~i~~i~~~e~ 167 (225)
T d2brxa1 95 DFWEAWKAVQLKKIPVMGGTHP-------GHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEEL 167 (225)
T ss_dssp SHHHHHHHHHTTCBCEECCCST-------TCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHH
T ss_pred cHHHHHHHHHhcccccccCCCC-------CcchhHHHHHHHHHhCchhhhhhhhhhhhhhcccccccccccceEEecchH
Confidence 4555667899999999875321 236899999999999999999999999983 46899999999999
Q ss_pred HHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccc
Q 013702 142 DSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQE 221 (438)
Q Consensus 142 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~ 221 (438)
.++...+. ...++| |
T Consensus 168 ~~~~~~~~--------------------------------------------------~~~g~g-g-------------- 182 (225)
T d2brxa1 168 LEIVGKGI--------------------------------------------------EKAGSS-S-------------- 182 (225)
T ss_dssp HHHHHC-----------------------------------------------------------C--------------
T ss_pred HHHhccCc--------------------------------------------------cccCCC-C--------------
Confidence 98876543 001123 3
Q ss_pred hhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCcccccC
Q 013702 222 RLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
|.+|+ ||..|.++|++ ++|+||+.++.| .+++.++..||.|.+
T Consensus 183 -------~~~k~-Aa~~a~~~gi~-v~I~ng~~~~~l-~~~l~ge~~GT~i~P 225 (225)
T d2brxa1 183 -------VIDPL-AAKIIARSGIK-TIVIGKEDAKDL-FRVIKGDHNGTTIEP 225 (225)
T ss_dssp -------CSCHH-HHHHHHHHTCC-EEEECHHHHTCH-HHHHTTCSSSEEECC
T ss_pred -------cccHH-HHHHHHHCCCc-EEEEeCCCcchH-HHHHCCCCCCcEecC
Confidence 77888 77888899997 999999999965 578888999999864
|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative acetyltransferase PF0028 species: Pyrococcus furiosus [TaxId: 2261]
Probab=99.50 E-value=7.5e-14 Score=120.35 Aligned_cols=115 Identities=21% Similarity=0.293 Sum_probs=85.3
Q ss_pred cCHHHHHHHHHHHHHcCcCCcCCHHHHH--------hhc----CcEEEEE-ECCEEEEEEEEeeecC----CCeEEEEEE
Q 013702 286 TDLSGIKQIIQPLVESGALVRRTDEELL--------KAL----DSFYVVE-REGQIIACAALFPFFK----EKCGEVAAI 348 (438)
Q Consensus 286 ~D~~~I~~L~~~~~~~~~~~~~~~e~l~--------~~~----~~~~V~~-~dg~iVG~~~l~~~~~----~~~~~I~~v 348 (438)
++++.+.++.......-...+.+.+... ..+ ..++++. .++++|||+.+.+..+ ...++|..+
T Consensus 9 d~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l 88 (149)
T d1vkca_ 9 EYIEEIKKLDREISYSFVRFPISYEEYEERHEELFESLLSQGEHKFFVALNERSELLGHVWICITLDTVDYVKIAYIYDI 88 (149)
T ss_dssp GGHHHHHHHHHHHHGGGCCSCCCHHHHHHHHHHHHHHHHHSSEEEEEEEEETTCCEEEEEEEEEEECTTTCSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHhCCCceEEEEEecCCeEEEEEEEEeccCCCCCCcEEEEEEE
Confidence 4578888887766544322233322221 111 2345554 4689999998865322 367899999
Q ss_pred EECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHHCCCeEece
Q 013702 349 GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFRECSI 400 (438)
Q Consensus 349 ~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k~GF~~~g~ 400 (438)
+|+|+|||||+|++||++++++|++.|++++.+.| ++|++||+|+||+..+.
T Consensus 89 ~V~~~~Rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~n~A~~~Y~k~GF~~~~~ 143 (149)
T d1vkca_ 89 EVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDNPAVKWYEERGYKARAL 143 (149)
T ss_dssp EECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTCTHHHHHHHTTCCCCCC
T ss_pred EECHHHcCCChHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCEEEEE
Confidence 99999999999999999999999999999999987 46899999999997653
|
| >d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 3-N-acetyltransferase species: Serratia marcescens [TaxId: 615]
Probab=99.47 E-value=8.5e-14 Score=117.33 Aligned_cols=118 Identities=13% Similarity=0.127 Sum_probs=88.8
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcC-----c-CCcCCHHHHHhhc----CcEEEEEECCEEEEEEEEeeec----CCCe
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESG-----A-LVRRTDEELLKAL----DSFYVVEREGQIIACAALFPFF----KEKC 342 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~-----~-~~~~~~e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~----~~~~ 342 (438)
+++++.+.++|.+.+.+++..+...- + ..+.+.+.+...+ ..++++..++++||++.+.+.. ....
T Consensus 2 ~i~~~r~~P~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~~~~~ 81 (137)
T d1bo4a_ 2 IIRTCRLGPDQVKSMRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRSE 81 (137)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHTTCHHHHHSSCCCHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEEECSSSSCEE
T ss_pred cEEEEeCCHhhHHHHHHHHHHHHHHhcchhhhccCCCcHHHHHHhhcCCCeEEEEEEECCeeeeecccccccCccCCCCE
Confidence 46788899999998887765432211 0 1222333333332 2457788899999999876532 3467
Q ss_pred EEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCC
Q 013702 343 GEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRG 394 (438)
Q Consensus 343 ~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~G 394 (438)
++|..++|+|+|||+|+|++|++++++++++.|++.+++.+ .++++||+|+|
T Consensus 82 ~~i~~l~V~p~~Rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~~~G 137 (137)
T d1bo4a_ 82 IYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLG 137 (137)
T ss_dssp EEEEEEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC-
T ss_pred EEEEEEEEcHHHhhhchhhHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHhcC
Confidence 89999999999999999999999999999999999999999 36899999987
|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PH0736 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.47 E-value=3.2e-13 Score=120.37 Aligned_cols=86 Identities=31% Similarity=0.546 Sum_probs=73.4
Q ss_pred hhcCcEEEEEECCEEEEEEEEeeec--------------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEE
Q 013702 314 KALDSFYVVEREGQIIACAALFPFF--------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDML 379 (438)
Q Consensus 314 ~~~~~~~V~~~dg~iVG~~~l~~~~--------------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l 379 (438)
.....+||+..++++||++.+.+.. ..+.++|..++|+|+|||+|||++||+.++++|++.|++ +
T Consensus 64 ~~~~~~~va~~d~~ivG~~~l~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~rg~GiG~~Ll~~~~~~ak~~G~~-~ 142 (182)
T d2gana1 64 QEFDELYTYQKDNRIIGTIALVYKRIKEKGIWWVPEELMNEKVGLIEFFVVDPEFQGKGIGSTLLEFAVKRLRSLGKD-P 142 (182)
T ss_dssp TTCSEEEEEEESSCEEEEEEEECSCGGGTCCTTCCGGGCSTTEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTCE-E
T ss_pred CCcceEEEEEECCEEEEEEEEeccCcccccccccccccCCCCEEEEEEEEECHhhcCCCHHHHHHHHHHHHHHHcCCe-E
Confidence 3445689999999999999987421 246799999999999999999999999999999999987 5
Q ss_pred EEEc----HHHHHHHHHCCCeEece
Q 013702 380 FLLT----TRTADWFKSRGFRECSI 400 (438)
Q Consensus 380 ~l~t----~~a~~fY~k~GF~~~g~ 400 (438)
++.| +.+.+||+|+||+.+..
T Consensus 143 ~l~~~~~n~~a~~fY~k~GF~~~~~ 167 (182)
T d2gana1 143 YVVTFPNLEAYSYYYMKKGFREIMR 167 (182)
T ss_dssp EEEECGGGSHHHHHHHTTTEEEEEC
T ss_pred EEEEccCCHHHHHHHHHCCCEEeeE
Confidence 5555 47899999999999864
|
| >d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA0115 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.42 E-value=2.4e-13 Score=117.93 Aligned_cols=119 Identities=18% Similarity=0.217 Sum_probs=86.7
Q ss_pred CCccCHHHHHHHHHHHHHcCcCCcCC-HHHHHhh-cCcEEEEEECCEEEEEEEEeeec-CCCeEEEEEEEECccccCCcH
Q 013702 283 AKVTDLSGIKQIIQPLVESGALVRRT-DEELLKA-LDSFYVVEREGQIIACAALFPFF-KEKCGEVAAIGVSPECRGQGQ 359 (438)
Q Consensus 283 at~~D~~~I~~L~~~~~~~~~~~~~~-~e~l~~~-~~~~~V~~~dg~iVG~~~l~~~~-~~~~~~I~~v~V~p~yRgqGi 359 (438)
++.+|+..+.+|....+......+.. .+..... -...++++.++++|||+.+.+.. ..+.+.|..++|+|+|||+|+
T Consensus 12 l~~~el~~i~~lR~~VFv~EQ~~~~~e~D~~D~~~~s~hl~~~~~~~~vg~~rl~~~~~~~~~~~i~rvaV~~~~Rg~Gi 91 (149)
T d1xeba_ 12 LTLKELYALLQLRTEVFVVEQKCPYQEVDGLDLVGDTHHLMAWRDGQLLAYLRLLDPVRHEGQVVIGRVVSSSAARGQGL 91 (149)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTTCCCCSCCSCTTSTTCEEEEEEETTEEEEEEEEECSTTTTTCEEEEEEEECGGGTTSSH
T ss_pred CCHHHHHHHHHHHHHheEecCCCCCCCCcCCcccCceEEEEEEeCCeEEEEEEEeeccccCCcEEEEEEEEehhhhccCh
Confidence 45567777777776665332221111 1111111 13467888999999999987532 346789999999999999999
Q ss_pred HHHHHHHHHHHHHHCCC-CEEEEEc-HHHHHHHHHCCCeEecee
Q 013702 360 GDKLLDYIEKKAASLGL-DMLFLLT-TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 360 G~~Ll~~l~~~a~~~g~-~~l~l~t-~~a~~fY~k~GF~~~g~~ 401 (438)
|++||+.+++++++.+. ..+++.+ ..+..||+|+||+..+..
T Consensus 92 G~~L~~~~l~~~~~~~~~~~i~l~A~~~a~~FY~k~GF~~~g~~ 135 (149)
T d1xeba_ 92 GHQLMERALQAAERLWLDTPVYLSAQAHLQAYYGRYGFVAVTEV 135 (149)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEESTTHHHHHTTTEEECSCC
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEeChHHHHHHHHHCCCEECCCc
Confidence 99999999999987754 5577776 568999999999999854
|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein MW0638 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.40 E-value=2.3e-12 Score=106.37 Aligned_cols=102 Identities=25% Similarity=0.246 Sum_probs=76.3
Q ss_pred EEECCccCHHHHHHHHH---HHHHc-CcCCcCCH-------HHHHhhc----CcEEEEEECCEEEEEEEEeeecCCCeEE
Q 013702 280 TRTAKVTDLSGIKQIIQ---PLVES-GALVRRTD-------EELLKAL----DSFYVVEREGQIIACAALFPFFKEKCGE 344 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~---~~~~~-~~~~~~~~-------e~l~~~~----~~~~V~~~dg~iVG~~~l~~~~~~~~~~ 344 (438)
||+++.+|.+.|.++.. ..... ......+. +.+.... ..+||++.++++|||+.+.+......++
T Consensus 1 IR~~~kdd~~~I~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~~~ 80 (118)
T d2aj6a1 1 MRTLNKDEHNYIKQIANIHETLLSQVESNYKCTKLSIALRYEMICSRLEHTNDKIYIYENEGQLIAFIWGHFSNEKSMVN 80 (118)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHSSSEEEEEEEETTEEEEEEEEEEETTTTEEE
T ss_pred CCcCChhHHHHHHHHHHHHHHHHHhccccccchhhhhHHHHHHHHHhhcCCCcEEEEEEECCEEEEEeeeccccCCCeEE
Confidence 79999999887766643 22222 11111111 1121111 3578999999999999988666678899
Q ss_pred EEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEE
Q 013702 345 VAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFL 381 (438)
Q Consensus 345 I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l 381 (438)
|..++|+|+|||+|+|++||++++++|++.|++.|.+
T Consensus 81 i~~l~V~~~~RgkGiG~~Ll~~~~~~a~~~g~~~i~~ 117 (118)
T d2aj6a1 81 IELLYVEPQFRKLGIATQLKIALEKWAKTMNAKRISN 117 (118)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCCCC
T ss_pred EEEEEEchhhccCHHHHHHHHHHHHHHHHhCCCEEEe
Confidence 9999999999999999999999999999999987643
|
| >d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.39 E-value=1.5e-13 Score=126.61 Aligned_cols=129 Identities=19% Similarity=0.152 Sum_probs=100.0
Q ss_pred eeeEeeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccc
Q 013702 62 TGEVKKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIR 134 (438)
Q Consensus 62 vG~v~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~ 134 (438)
.|....++......+++.+.+||+.. +.-+.++|++|+.+|..|+||.|+++|||+|++ +++++|+
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~v~v~~~-------~~~~~stD~laa~vA~~l~Ad~liilTDVDGvYt~dP~~~~~A~~i~ 156 (219)
T d2ij9a1 84 AAKKVPVDFMEAEELSKLYRVVVMGG-------TFPGHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYD 156 (219)
T ss_dssp BCSSCCSSHHHHHHHHTTCSEEEECC-------CSSSSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCS
T ss_pred ccchhhHHHHHHHHHhccCCceEECC-------CCCCCcccHHHHHHHHHcCchHhhhccCcccccccccccCccccccc
Confidence 44455678888899999999998753 223457799999999999999999999999983 4589999
Q ss_pred cCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccc
Q 013702 135 FLTLQEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQG 214 (438)
Q Consensus 135 ~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~ 214 (438)
+++.+|+.++...+. ..+.| |
T Consensus 157 ~is~~e~~~~~~~~~---------------------------------------------------~~~~g-g------- 177 (219)
T d2ij9a1 157 RLSPQQLVEIVSRSS---------------------------------------------------AKAGT-N------- 177 (219)
T ss_dssp EECHHHHHHHTCC--------------------------------------------------------CC-C-------
T ss_pred ccCHHHHHHHhhccC---------------------------------------------------ccCCC-C-------
Confidence 999998877743221 01122 3
Q ss_pred ccccccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 215 FAIGGQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|..|+.||..|.++|++ ++|++|+ ++++ ..++.++..||.|+
T Consensus 178 --------------~~~k~~Aa~~a~~~gi~-~~I~~g~-~~ni-~~~l~Ge~vGT~Is 219 (219)
T d2ij9a1 178 --------------VVIDLLAAKIIERSKIK-TYVILGT-PENI-MKAVKGEAVGTVIA 219 (219)
T ss_dssp --------------CCSCHHHHHHHHHHTCC-EEEEECC-HHHH-HHHHTTCCCSEEEC
T ss_pred --------------CcchHHHHHHHHHcCCc-EEEecCC-CcHH-HHHHCCCCCceEeC
Confidence 78899999999999997 8999997 5555 56777888999874
|
| >d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase Ava4977 species: Anabaena variabilis [TaxId: 1172]
Probab=99.38 E-value=2e-12 Score=123.23 Aligned_cols=119 Identities=18% Similarity=0.327 Sum_probs=96.4
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc--CcEEEEEECCEEEEEEEEeeecC------CCeEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL--DSFYVVEREGQIIACAALFPFFK------EKCGEVAAIG 349 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~--~~~~V~~~dg~iVG~~~l~~~~~------~~~~~I~~v~ 349 (438)
+.||+++++|+++|.+|+...+..... ..+.+.+.+ +.++++++++++||++.+.+... -..+.|..++
T Consensus 2 ~~~~ka~~~d~~~l~~l~~~~F~~~~~---~~~~~~~~~~~~~~~v~~~~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v~ 78 (283)
T d2ozga2 2 FKYTKASQENIQQLGNILEQCFVMSFG---DSEIYVKGIGLENFRVIYREQKVAGGLAILPMGQWWGGQRVPMAGIAAVG 78 (283)
T ss_dssp EEEEECCTTTHHHHHHHHHHHTTCCTT---HHHHHHHHHCGGGEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEECCHHHHHHHHHHHHHHcCCCcC---cHHHHHHHhcCCCEEEEEECCEEEEEEEEEEeeeeECCeeeeEeeEEEEE
Confidence 579999999999999999887755432 123333333 57899999999999999987531 1457899999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
|+|+|||+|+|++||+.+++.+++.|+....+.+ .+..||+|+||+..+.
T Consensus 79 v~p~~rg~G~~~~L~~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~Gf~~~~~ 128 (283)
T d2ozga2 79 IAPEYRGDGAAIALIQHTLQEISEQDIPISVLYP-ATQRLYRKAGYEQAGS 128 (283)
T ss_dssp ECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHHTTCEEEEE
T ss_pred ECcccccCChHHHHHHHHHHHHHhcCceEEEccC-CccchHHcCCCeEece
Confidence 9999999999999999999999999988766654 4578999999998763
|
| >d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: L7/L12-Ribosomal-protein-serine acetyltransferase RimL species: Salmonella typhimurium [TaxId: 90371]
Probab=99.36 E-value=8.6e-12 Score=109.72 Aligned_cols=127 Identities=10% Similarity=0.074 Sum_probs=93.5
Q ss_pred CCceeEEEECCccCHHHHHHHHHHHH---HcCcC---CcCCHHHHHhh-----------cCcEEEEEECCEEEEEEEEee
Q 013702 274 SDLYEGTRTAKVTDLSGIKQIIQPLV---ESGAL---VRRTDEELLKA-----------LDSFYVVEREGQIIACAALFP 336 (438)
Q Consensus 274 ~d~~~~IR~at~~D~~~I~~L~~~~~---~~~~~---~~~~~e~l~~~-----------~~~~~V~~~dg~iVG~~~l~~ 336 (438)
-...+.+|+++++|.+.+.+++.+.. ..... ...+.++.... ...++++..++++||++.+..
T Consensus 5 ~~~~l~LR~~~~~d~~~l~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~~~~ 84 (174)
T d1s7ka1 5 VSTTLELRAADESHVPALHQLVLKNKAWLQQSLDWPQYVTSQEETRKHVQGNILLHQRGYAKMYLIFCQNEMAGVLSFNA 84 (174)
T ss_dssp CSSSEEEEECCGGGHHHHHHHHHHC-------------------CHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEEEE
T ss_pred cCCCEEEEcCCHHHHHHHHHHHHcCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHcCCCceeEEEEcCCceEEEeecc
Confidence 34567899999999999999975421 11110 01122222111 124677888999999999876
Q ss_pred e-cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 337 F-FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 337 ~-~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
. .....+++ .++|+|+|||+|+|++++..+++++ ...+++++.+.+ .+|+++|+|+||+..+..
T Consensus 85 ~~~~~~~~ei-g~~i~~~~~gkG~~~ea~~~l~~~~f~~~~~~~l~a~~~~~N~~S~~~~~k~Gf~~eG~~ 154 (174)
T d1s7ka1 85 IEPINKAAYI-GYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCM 154 (174)
T ss_dssp EETTTTEEEE-EEEECGGGCSSSHHHHHHHHHHHHHHHHCSCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCCeEEE-EEEEeehhccchhHHHHHHHHHhhhhhhcCcccceeecccCcHHHHHHHHHCCCEEEEEE
Confidence 4 34467888 6789999999999999999999999 567999998888 589999999999998854
|
| >d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein Rv1347c/MT1389 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.36 E-value=1.3e-12 Score=117.85 Aligned_cols=135 Identities=13% Similarity=-0.036 Sum_probs=104.6
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcC-cCCcCCHHHHHhhc--------CcEEEEEECCEEEEEEEEeeec---------
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKAL--------DSFYVVEREGQIIACAALFPFF--------- 338 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~~--------~~~~V~~~dg~iVG~~~l~~~~--------- 338 (438)
-+.||+++++|.+.|.+++++..... +..+++.+....++ ...++++.+++.+|++.++...
T Consensus 33 ~~~LR~~~~~D~~~l~~w~~dp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 112 (198)
T d1yk3a1 33 PYGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYD 112 (198)
T ss_dssp TEEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGSSC
T ss_pred ceEEEeCCHHHHHHHHHHHcChhhhhccCCCCCHHHHHHHHHHHhcCCccceEEEEECCEEEEEEEEEeccccccccccc
Confidence 36899999999999999987643222 23445555544433 2367888999999999886421
Q ss_pred -CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHH--HCCCCEEEEEc----HHHHHHHHHCCCeEeceeccchHhhhhh
Q 013702 339 -KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAA--SLGLDMLFLLT----TRTADWFKSRGFRECSIEMIPEERRKRI 411 (438)
Q Consensus 339 -~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~--~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~lp~~~~~~y 411 (438)
.+....+..+.++|+|||||||+++++.+++++. ..++.+|.+.+ ++|+++|+|+||+.++..++|..+-..|
T Consensus 113 ~~~~~~~~~~~~~~~~~~GkG~gt~~l~~li~~~f~~~~~~~ri~~~v~~~N~~s~rl~erlGF~~~ge~d~~~~~~~l~ 192 (198)
T d1yk3a1 113 ADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDTTNRRMALY 192 (198)
T ss_dssp CCTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEEEECSSCEEEEE
T ss_pred cCCCceEEEEEEEChhhcCCcHHHHHHHHHHHHHHhhcCCccEEEEEeCCCCHHHHHHHHHcCCEEEeEEecCCCcEEEE
Confidence 2345678789999999999999999999999984 46999999988 5899999999999999988876544433
|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase EF2353 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.35 E-value=3.9e-12 Score=121.37 Aligned_cols=122 Identities=15% Similarity=0.242 Sum_probs=94.3
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcC-----CcCCHHHHHhh------cCcEEEEEECCEEEEEEEEeeecC---C---
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGAL-----VRRTDEELLKA------LDSFYVVEREGQIIACAALFPFFK---E--- 340 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~-----~~~~~e~l~~~------~~~~~V~~~dg~iVG~~~l~~~~~---~--- 340 (438)
++||+++++|++++.+|++..+..... .......+.+. ...+++++++|++||++.+.++.- +
T Consensus 1 m~iR~~~~~d~~~i~~L~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~ 80 (291)
T d2i00a2 1 LTLKPVEEEHIDQFNELLSYVFQVTEADIEESGFENKRAFIKSKQPILELSKVFGWFHENQLISQIAIYPCEVNIHGALY 80 (291)
T ss_dssp CEEEECCGGGHHHHHHHHHHHCCCCHHHHHHTTCSSHHHHHHTTHHHHHHSEEEEEEETTEEEEEEEEEEEEEEETTEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHcCcccccchhcchhhhHHHHHhhccccccCcEEEEEECCEEEEEEEEEEeEEEECCeee
Confidence 579999999999999998865432211 01122222221 246889999999999999886531 1
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
..++|..++|+|+|||||+|++||+++++.+++.|+....+.+ .+..||+|+||+.++.
T Consensus 81 ~~~~i~~v~v~p~~r~~G~~~~L~~~~~~~~~~~~~~~~~l~~-~~~~~Y~~~Gf~~~~~ 139 (291)
T d2i00a2 81 KMGGVTGVGTYPEYANHGLMKDLIQTALEEMRQDKQWISYLFP-YNIPYYRRKGWEIMSD 139 (291)
T ss_dssp EEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHHTTCEEEEE
T ss_pred eEEEEEEEEEchhhcCCChHHHHHHHHHHHHHhcCCcEEEeec-cchhhHhcCCCEEecc
Confidence 4578999999999999999999999999999999998877764 3578999999998763
|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Hypothetical protein EF1021 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.34 E-value=3.6e-12 Score=121.42 Aligned_cols=121 Identities=12% Similarity=0.182 Sum_probs=95.5
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhh--cCcEEEEEECCEEEEEEEEeeecC---C---CeEEEEEEE
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKA--LDSFYVVEREGQIIACAALFPFFK---E---KCGEVAAIG 349 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~--~~~~~V~~~dg~iVG~~~l~~~~~---~---~~~~I~~v~ 349 (438)
.+||+++++|++.+.+|+...+..... +...+.+... ...+++++++|++||++.+.++.- + ..+.|..++
T Consensus 3 ~~iR~l~~~d~~~i~~l~~~~F~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lvg~~~~~~~~~~~~g~~~~~~~i~~v~ 81 (285)
T d2hv2a2 3 KRVKKMGKEEMKEMFDLVIYAFNQEPT-AERQERFEKLLSHTQSYGFLIDEQLTSQVMATPFQVNFHGVRYPMAGIGYVA 81 (285)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHTSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHHHcCCCCC-hhHHHHHHHhhccCcEEEEEECCEEEEEEEEEEeEEEECCeeeeEEEEEEEE
Confidence 579999999999999998876644321 1112222222 256889999999999999886431 1 457899999
Q ss_pred ECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 350 VSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 350 V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
|+|+|||+|+|++||+++++.+++.|+..+.+.. .+.+||+++||+.++.
T Consensus 82 v~p~~rg~G~~~~l~~~~~~~~~~~g~~~~~l~~-~~~~~Y~~~Gf~~~~~ 131 (285)
T d2hv2a2 82 SYPEYRGEGGISAIMKEMLADLAKQKVALSYLAP-FSYPFYRQYGYEQTFE 131 (285)
T ss_dssp ECTTCCSSCHHHHHHHHHHHHHHHTTCCEEEECC-SCHHHHHTTTCEECCE
T ss_pred ECHHHcCCChHHHHHHHHHHHHHHhCCceeeeec-cchhhHhcCCcEEeee
Confidence 9999999999999999999999999999887765 3579999999998753
|
| >d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltransferase YdaF species: Bacillus subtilis [TaxId: 1423]
Probab=99.33 E-value=1.9e-11 Score=107.84 Aligned_cols=125 Identities=12% Similarity=0.070 Sum_probs=94.9
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHc--C-c---CCcCCHHHHHhhc------------CcEEEEEECCEEEEEEEEeee
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVES--G-A---LVRRTDEELLKAL------------DSFYVVEREGQIIACAALFPF 337 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~--~-~---~~~~~~e~l~~~~------------~~~~V~~~dg~iVG~~~l~~~ 337 (438)
..+.||+++++|.+.+.+++...... . . ..+.+.+.+.+.+ ...+++..++++||++.+...
T Consensus 9 ~~l~LR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~ 88 (180)
T d1nsla_ 9 EHITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNL 88 (180)
T ss_dssp SSEEEEECCGGGHHHHHHHHHTTTTTTTTTSCC----CCHHHHHHTHHHHHHHHHHTTSCEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEeCCHHHHHHHHHHHhcChHHHhhhcccCCCCccHHHHHHHHHHHHHHhhhccCcEEEEEEECCcEEEEEEeeec
Confidence 44789999999999999997532111 1 1 1222333332221 235667789999999998864
Q ss_pred -cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 338 -FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 338 -~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.....++| .+.|+|+|||+|||+.++..+++++ ++.++++|.+.+ .+++++|+|+||+..+..
T Consensus 89 ~~~~~~~ei-g~~i~~~~~g~G~~~e~~~~~~~~af~~~~~~~i~~~v~~~N~~s~~~~~k~GF~~eg~~ 157 (180)
T d1nsla_ 89 DQVNRKAEI-GYWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEGKA 157 (180)
T ss_dssp ETTTTEEEE-EEEECGGGTTSSHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred ccCCCeEEE-EEeecccccccccchhhhhhhhhccccccCcceeecccccccHHHHHHHHHCCCEEEEEE
Confidence 34578899 5889999999999999999999999 667999999888 589999999999998753
|
| >d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein PA3270 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.28 E-value=5.1e-11 Score=105.78 Aligned_cols=126 Identities=13% Similarity=0.016 Sum_probs=97.7
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHc--CcCCcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeee-cCCCeEEE
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVES--GALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPF-FKEKCGEV 345 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~--~~~~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~-~~~~~~~I 345 (438)
..+.+|+++++|.+.+.+++...... ....+.+.+.+...+ ...+++..++++||++.+... .....++|
T Consensus 8 ~~l~Lrpl~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~iG~i~l~~~~~~~~~~ei 87 (183)
T d1yrea1 8 GALRLEPLVEADIPELVSLAEANREALQYMDGPTRPDWYRQSLAEQREGRALPLAVRLGVQLVGTTRFAEFLPALPACEI 87 (183)
T ss_dssp TTEEEEECCGGGHHHHHHHHHTTTTTTTTSSSTTSHHHHHHHHHHHHTTSEEEEEEEETTEEEEEEEEEEEETTTTEEEE
T ss_pred CCEEEEECCHHHHHHHHHHHhCCHHHhccCCCCCCHHHHHHHHHHHhCCCceEEEEEECCEEEEEEEeeeccccCCeEEE
Confidence 44689999999999999987542111 111233333333222 234777889999999998754 45678999
Q ss_pred EEEEECccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 346 AAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 346 ~~v~V~p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
+.+.++|+|||+|+|++++..+++++ ++.|+.++.+.+ .+++++|+|+||+..+..
T Consensus 88 G~~~l~~~~~g~G~~~ea~~~l~~~af~~lg~~~i~~~v~~~N~aS~~~~~k~Gf~~eg~~ 148 (183)
T d1yrea1 88 GWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVL 148 (183)
T ss_dssp EEEEECGGGTTTTHHHHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred EEEEecHHHcCCccchhHHHHHhhhhhhccCcceEEeecccCCHHHHhhHhccCeEEEEEe
Confidence 87789999999999999999999999 567999999888 589999999999998753
|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Aminoglycoside 2'-N-acetyltransferase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.24 E-value=2e-11 Score=108.73 Aligned_cols=113 Identities=23% Similarity=0.291 Sum_probs=83.5
Q ss_pred ECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC-cEEEEEECCEEEEEEEEeeec---C---CCeEEEEEEEECccc
Q 013702 282 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD-SFYVVEREGQIIACAALFPFF---K---EKCGEVAAIGVSPEC 354 (438)
Q Consensus 282 ~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~-~~~V~~~dg~iVG~~~l~~~~---~---~~~~~I~~v~V~p~y 354 (438)
.++.++.+.+.++....+. ..++.+.+..... ..+++.++++++|++.+.+.. . ...++|..++|+|+|
T Consensus 15 dld~~~~~~i~~l~~~aF~----~d~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~I~~v~V~p~~ 90 (181)
T d1m4ia_ 15 DLDSETRQDIRQMVTGAFA----GDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADW 90 (181)
T ss_dssp GCCHHHHHHHHHHHHHHTT----TCCCHHHHHHTCSSEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEECGGG
T ss_pred hCCHHHHHHHHHHHHHhcc----CCCCHHHHhhhcCceEEEEEeCCceeEEEEEEEEEEecCCcccceEEEEEEEEcHHH
Confidence 3445555666666555543 3456667766654 346677899999999876421 1 145789999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 355 RGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 355 RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
||+|+|++||+.+++.+++.+ ....+.+ ..+..||+++||+...
T Consensus 91 Rg~Gig~~Ll~~~~~~~r~~~-~~~~l~~~~~~~~fY~~~G~~~~~ 135 (181)
T d1m4ia_ 91 RGQRLVSALLDAVEQVMRGAY-QLGALSSSARARRLYASRGWLPWH 135 (181)
T ss_dssp TTSSHHHHHHHHHHHHHHHHC-SEEEEECCTTTHHHHHHTTCEECC
T ss_pred CCCHHHHHHHHHHHHHHHhcC-CEEEEecchhhHHHHHHcCCEEcC
Confidence 999999999999999998765 4444555 5788999999999865
|
| >d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Putative ribosomal-protein-serine acetyltransferase VC1889 species: Vibrio cholerae [TaxId: 666]
Probab=99.22 E-value=8.8e-11 Score=103.55 Aligned_cols=124 Identities=12% Similarity=0.058 Sum_probs=93.4
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHc-C----cCCcCCHHHHHhhc-----------CcEEEEEE--CCEEEEEEEEeee-
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVES-G----ALVRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPF- 337 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~-~----~~~~~~~e~l~~~~-----------~~~~V~~~--dg~iVG~~~l~~~- 337 (438)
.+.||+++.+|++.+.+++.+.... . ...+.+.+...+++ ...|++.+ ++++||++.+...
T Consensus 11 rl~LR~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~ 90 (178)
T d2fcka1 11 RLQLRLITADEAEELVQCIRQSQTLHQWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFY 90 (178)
T ss_dssp SEEEECCCGGGHHHHHHHHHTCSSGGGTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEEE
T ss_pred cEEEEeCCHHHHHHHHHHHcCCHHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEeeeccCCceEEEEeecccc
Confidence 3689999999999999998753211 1 11223444433322 23455544 5899999998754
Q ss_pred cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 338 FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 338 ~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
.....++| .+.|+|+|||+|+|+++++.+++++ ++.+++++.+.+ .+|+++|+|+||+..+..
T Consensus 91 ~~~~~~ei-g~~i~~~~~g~G~~~e~l~~l~~~af~~~~~~~i~~~~~~~N~~s~~l~ek~GF~~eg~~ 158 (178)
T d2fcka1 91 HTFNMASL-GYWIGDRYQRQGYGKEALTALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLA 158 (178)
T ss_dssp GGGTEEEE-EEEECHHHHTTTHHHHHHHHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCCeEEE-EEeeecccccchhhhhhhheeeeeeccccCcceeeEecCCCcHHHHHHHHHCCCEEEEEE
Confidence 45678899 5899999999999999999999999 557999999888 589999999999998854
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.22 E-value=7.5e-11 Score=111.92 Aligned_cols=127 Identities=18% Similarity=0.126 Sum_probs=92.4
Q ss_pred CceeEEEECCccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhcC-------------cEEEEEECCEEEEEEEEeeec-C
Q 013702 275 DLYEGTRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD-------------SFYVVEREGQIIACAALFPFF-K 339 (438)
Q Consensus 275 d~~~~IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~~-------------~~~V~~~dg~iVG~~~l~~~~-~ 339 (438)
+.....+..+..|...+.++....+..... .++..+.+..... ..++.+.+|+++|++.+.... .
T Consensus 148 ~~~~~~~~~~~~d~~~~~~l~~~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vvG~~~~~~~~~~ 227 (308)
T d1p0ha_ 148 DGVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWFDPDGLILAFGDSPRERPGRLLGFHWTKVHPDH 227 (308)
T ss_dssp TTEEEEECCSGGGHHHHHHHHHHHTTTCTTTSSCCHHHHHHHHTSTTCCGGGEEEEEEC------CCEEEEEEEECCTTS
T ss_pred CceeeecccchHHHHHHHHHHHhhhhhccccccchhHHHHHHHhccccCcccccceeeecccccCCeEEEEEEEEEcCCC
Confidence 344556778888999999987776654433 3445555444321 134456789999999887543 3
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHC----------CCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASL----------GLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~----------g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
...++|..++|+|+|||+|||+.|+..++++++++ |+..+.+.+ +++.+||+++||++++..
T Consensus 228 ~~~~~i~~~~V~p~~RGrGlG~~Ll~~~~~~~~~~g~~~~~~~~~g~~~i~L~V~~~N~~A~~lY~~~GF~~~~~~ 303 (308)
T d1p0ha_ 228 PGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARRLGGRKTLDPAVEPAVLLYVESDNVAAVRTYQSLGFTTYSVD 303 (308)
T ss_dssp TTEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHC---------CCCEEEEEEETTCHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEeccEECHHHcCCCHHHHHHHHHHHHHHHhCCcceeeecCCccEEEEeccCCCHHHHHHHHHCCCEEeceE
Confidence 47899999999999999999999999999999887 566666666 479999999999998765
|
| >d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable acetyltranferase Atu2435 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.20 E-value=1.2e-10 Score=100.12 Aligned_cols=125 Identities=11% Similarity=0.018 Sum_probs=96.2
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc-----------CcEEEEEE--CCEEEEEEEEeeecCCCeE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------DSFYVVER--EGQIIACAALFPFFKEKCG 343 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~-----------~~~~V~~~--dg~iVG~~~l~~~~~~~~~ 343 (438)
.+.||+++.+|++.+.+++++.....+..+.+.++...+. ..++++.. ++.++|++.+.........
T Consensus 9 RL~LRp~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ig~~~~~~~~~~~~~ 88 (164)
T d2fsra1 9 RLTLRPLAMADFPAYRDFMASPRSTGVGGPYDLPSTWGVFCHDLANWHFFGHGALMIDLGETGECIGQIGINHGPLFPEK 88 (164)
T ss_dssp SEEEECCCGGGHHHHHHHHHSGGGGGGTCCCCHHHHHHHHHHHHHHHHHHSCCEEEEEETTTTEEEEEEEEECSTTCSSC
T ss_pred cEEEecCCHHHHHHHHHHHcChhhhhcCCCCCcHHHHHHHHHHHHHHhhcCcceEEEEEcCCCeEEEEEEeeccCccccc
Confidence 3689999999999999998775544444455544433322 23445443 5789999998754444555
Q ss_pred EEEEEEECccccCCcHHHHHHHHHHHHH-HHCCCCEEEEEc----HHHHHHHHHCCCeEeceec
Q 013702 344 EVAAIGVSPECRGQGQGDKLLDYIEKKA-ASLGLDMLFLLT----TRTADWFKSRGFRECSIEM 402 (438)
Q Consensus 344 ~I~~v~V~p~yRgqGiG~~Ll~~l~~~a-~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~~ 402 (438)
++ .+.+.|+|+++|+|..++..++.++ ++.++.++.+.+ .+|+++|+|+||+..+..+
T Consensus 89 ~~-g~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~v~~~v~~~N~~S~rl~ek~GF~~eg~~~ 151 (164)
T d2fsra1 89 EL-GWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLAP 151 (164)
T ss_dssp EE-EEEECTTCTTSSHHHHHHHHHHHHHHHHSCCSCEEEEECTTCHHHHHHHHHTTCEECTTSC
T ss_pred eE-eeEeeeeeccccccccceeEEEeeccccccceeEEEEECcCCHHHHHHHHHCCCEEeeeEc
Confidence 55 6899999999999999999999998 468999999988 5899999999999988654
|
| >d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Haemophilus influenzae [TaxId: 727]
Probab=99.19 E-value=2.4e-11 Score=112.37 Aligned_cols=119 Identities=17% Similarity=0.131 Sum_probs=95.3
Q ss_pred eeeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCH
Q 013702 66 KKVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTL 138 (438)
Q Consensus 66 ~~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~ 138 (438)
.......+..+++.+.+|++.... +.-..++|.+|+.+|.+++||.|+++|||+|++ ++.+++++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~dnD~laa~vA~~~~Ad~lii~TDVdGvyt~dP~~~~~A~~i~~i~~ 185 (236)
T d2a1fa1 111 DTYNWSEAIKMLREKRVVIFSAGT-----GNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLSY 185 (236)
T ss_dssp EECCHHHHHHHHHTTCEEEEESTT-----SCSSCCHHHHHHHHHHHTTCSEEEEEESSSSCBCC-------CCBCSEECH
T ss_pred HHhhhhhhhhhhhhcccccccccc-----cCCCCCCcHHHHHHHHHhchhHHHHhhcccccccccccccccccccccccH
Confidence 345677788888999999876543 334568999999999999999999999999983 34788999987
Q ss_pred HHHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCcccccccccc
Q 013702 139 QEADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIG 218 (438)
Q Consensus 139 ~e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~ 218 (438)
+|+.+ .| +
T Consensus 186 ~e~l~---~G----------------------------------------------------------~----------- 193 (236)
T d2a1fa1 186 AEVID---KE----------------------------------------------------------L----------- 193 (236)
T ss_dssp HHHHH---TT----------------------------------------------------------C-----------
T ss_pred HHHHh---cC----------------------------------------------------------C-----------
Confidence 76432 12 2
Q ss_pred ccchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 219 GQERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
|..|+.||..|.++|++ ++|+||..|+.+ ..++.++..||.|+
T Consensus 194 ----------~v~k~~Aa~~a~~~gi~-v~I~ng~~~~~l-~~~l~Ge~~GTlI~ 236 (236)
T d2a1fa1 194 ----------KVMDLSAFTLARDHGMP-IRVFNMGKPGAL-RQVVTGTEEGTTIC 236 (236)
T ss_dssp ----------CSSCHHHHHHHHHHTCC-EEEEETTSTTHH-HHHHTCSCSSEEEC
T ss_pred ----------ceeHHHHHHHHHHCCCe-EEEEeCCCCcHH-HHHHcCCCCcceeC
Confidence 55689999999999996 999999999965 56778888999985
|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Hypothetical protein cg14615-pa domain: Hypothetical protein cg14615-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.13 E-value=5.4e-11 Score=114.29 Aligned_cols=115 Identities=15% Similarity=0.107 Sum_probs=88.6
Q ss_pred ceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc---CcEEEE-EECCEEEEEEEEeeecCCCeEEEEEEEEC
Q 013702 276 LYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL---DSFYVV-EREGQIIACAALFPFFKEKCGEVAAIGVS 351 (438)
Q Consensus 276 ~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~---~~~~V~-~~dg~iVG~~~l~~~~~~~~~~I~~v~V~ 351 (438)
..+.+|+++.+|.+.+.++|. ...+.+.+.+...+ ..+.++ .++|++||++...+ .++|..++|+
T Consensus 166 ~~~~lr~l~~~da~~i~~~W~------~~~~~s~~~i~~~i~~~~~~gl~~~e~G~lv~w~~~~~-----~g~l~~l~V~ 234 (297)
T d1sqha_ 166 SEFEIRRLRAEDAAMVHDSWP------NKGEGSLTYLQALVRFNKSLGICRSDTGELIAWIFQND-----FSGLGMLQVL 234 (297)
T ss_dssp TTEEEECCCGGGHHHHHHTCT------TCSSSCHHHHHHHHHHSCEEEEEETTTCCEEEEEEECT-----TSSEEEEEEC
T ss_pred CCCEeecCCHHHHHHHHHhcC------CCCcchHHHHHHHHhhCCeEEEEECCCCCEEEEEEECC-----CEEEEEEEEC
Confidence 446899999999999887641 11234544444443 233343 34589999986652 3578999999
Q ss_pred ccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEecee
Q 013702 352 PECRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFRECSIE 401 (438)
Q Consensus 352 p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~g~~ 401 (438)
|+|||+|+|+.|+..+++++++.|+..+++.+ ..+.+||+|+||+.++..
T Consensus 235 p~~r~~G~g~~l~~~~~~~~~~~g~~~v~~~v~~~N~~s~~ly~klGF~~~~~~ 288 (297)
T d1sqha_ 235 PKAERRGLGGLLAAAMSREIARGEEITLTAWIVATNWRSEALLKRIGYQKDLVN 288 (297)
T ss_dssp GGGCSSSHHHHHHHHHHHHHHHHSCSCEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred hHhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCcHHHHHHHHHCCCEEeeEE
Confidence 99999999999999999999999998888777 579999999999998643
|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein SA2309 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.08 E-value=1.9e-10 Score=92.90 Aligned_cols=75 Identities=23% Similarity=0.301 Sum_probs=67.2
Q ss_pred CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHC
Q 013702 317 DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSR 393 (438)
Q Consensus 317 ~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~ 393 (438)
+.+|++.++|+++|++.+.+ .+++.++|..++|+|+|||+|+|++|++.++++|++.|.+ +...|+-+.+||+|+
T Consensus 11 ~~f~v~~~~g~~vg~~~~~~-~~~~~~~i~~~~V~p~~RG~Gig~~Lv~~~l~~Ar~~g~k-vvp~c~y~~~~~~k~ 85 (102)
T d1r57a_ 11 NKFYIGDDENNALAEITYRF-VDNNEINIDHTGVSDELGGQGVGKKLLKAVVEHARENNLK-IIASCSFAKHMLEKE 85 (102)
T ss_dssp TEEEEESSSTTEEEEEEEEE-SSSSEEEEEEEEECCSSSTTCTHHHHHHHHHHHHHHHTCE-EEESSHHHHHHHHHC
T ss_pred CEEEEEEeCCceEEEEEEEE-cCCCEEEEEEEEEChHHCCccHHHHHHHHHHHHHHHCCCE-EEEecHhHHHHHHhC
Confidence 56899999999999999885 4567999999999999999999999999999999999975 667777888999986
|
| >d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.85 E-value=7.2e-09 Score=99.33 Aligned_cols=114 Identities=18% Similarity=0.259 Sum_probs=90.3
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeeeC-HHHHHHHhcCCceEEEcCc-ccCCCCCeeec-
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKVD-VTRMRERLDGGCLVILSNL-GYSSSGEVLNC- 99 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v~-~~~i~~ll~~g~IPVi~~i-~~~~~g~~~ni- 99 (438)
.|++.|.+ +.-+...+-.+++....+ .-.+.... .+.|..+++.+.|||++++ |.+++|++..+
T Consensus 139 ~L~~~Gi~----a~~ld~~~~~i~t~~~~~---------~a~~~~~~~~~~l~~~~~~~~v~Vv~GFig~~~~G~~ttLg 205 (302)
T d2hmfa1 139 AIRDLGEK----SIALEGGEAGIITDNNFG---------SARVKRLEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLG 205 (302)
T ss_dssp HHHHTTCC----EEEECTTTTTEEECSCTT---------SCCEEEECHHHHHHHHHHTTCEEEEESSEEECTTCCEEECC
T ss_pred HHHHcCCc----eEEeeccccccccCCccc---------hhhhhhhhhHHHHHHHHhcCCeEEeecccccCCCCCEEEEe
Confidence 56777765 777777776666544322 22333333 4668888999999999986 88999999988
Q ss_pred --ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHHHHHHHHhhh
Q 013702 100 --NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 100 --naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e~~~l~~~g~ 149 (438)
.+|..|+.+|.+|+|+.+.+.|||+|+ | ++.++|++|+++|+.+|...|.
T Consensus 206 RgGSD~tA~~la~~l~A~~~~i~tdv~gi~~~dP~~~~~a~~~~~~~y~ea~eLa~~g~ 264 (302)
T d2hmfa1 206 RGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGA 264 (302)
T ss_dssp TTTHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHHHHTTC
T ss_pred ccCcccHHHHHHHHhccHHHHHHhccchhccchhhcCCCceEecccCHHHHHHHHhCCC
Confidence 589999999999999999999999987 3 3578999999999999987664
|
| >d1ybda1 c.73.1.3 (A:6-241) Uridylate kinase PyrH {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Neisseria meningitidis [TaxId: 487]
Probab=98.84 E-value=3e-09 Score=97.56 Aligned_cols=118 Identities=16% Similarity=0.107 Sum_probs=91.0
Q ss_pred eeCHHHHHHHhcCCceEEEcCcccCCCCCeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHH
Q 013702 67 KVDVTRMRERLDGGCLVILSNLGYSSSGEVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQ 139 (438)
Q Consensus 67 ~v~~~~i~~ll~~g~IPVi~~i~~~~~g~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~ 139 (438)
..+...+...++.+.+|++... ++....++|.+|+.+|..++||.|+++|||+|++ ++.++++.++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gdnD~laa~vA~~~~ad~liilTdVdGvy~~dP~~~~~a~~~~~~~~~ 185 (236)
T d1ybda1 111 TYARPKAIQYLEEGKVVIFAAG-----TGNPFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFD 185 (236)
T ss_dssp ECCHHHHHHHHHTTCEEEEEST-----TSSTTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHH
T ss_pred hHHHHHHHhhhccCceeccccc-----cccccccchHHHHHHHHHhCccceeeccCccchhhccccccccceeeccccHH
Confidence 4567778888899988887533 2344678999999999999999999999999883 457888888876
Q ss_pred HHHHHHHhhhhhhhHHHhHhhhhhcccccccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccc
Q 013702 140 EADSLIRQRVKQSEIAANYVKAVAEEDITCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGG 219 (438)
Q Consensus 140 e~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~ 219 (438)
|... .| +| |
T Consensus 186 e~~~---~g-------------------------------------------------------~~-~------------ 194 (236)
T d1ybda1 186 EALL---KN-------------------------------------------------------LK-V------------ 194 (236)
T ss_dssp HHHH---TT-------------------------------------------------------CC-S------------
T ss_pred HHHh---cC-------------------------------------------------------ch-H------------
Confidence 5432 22 11 2
Q ss_pred cchhhhcccchHHHHHHHHHHHcCCCeEEeeccccCceeeeehhhcCCCccccc
Q 013702 220 QERLSRLNGYLSELAAAAFVCRRGVQRVHLLDGTIGGVLLLELFKRDGMGTMVA 273 (438)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~i~~g~~~~~ll~el~~~~g~GT~i~ 273 (438)
| |+.||..|.++|++ ++|+||+.|+.+ ..++.++..||.|.
T Consensus 195 ---------m--~~~Aa~~a~~~gi~-v~I~ng~~~~~i-~~~l~Ge~vGTlIh 235 (236)
T d1ybda1 195 ---------M--DATAFALCRERKLN-IVVFGIAKEGSL-KRVITGEDEGTLVH 235 (236)
T ss_dssp ---------S--CHHHHHHHHHTTCC-EEEECTTSTTHH-HHHHHTCSCSEEEE
T ss_pred ---------H--HHHHHHHHHHCCCc-EEEEeCCCccHH-HHHHcCCCCCcEeC
Confidence 5 34588889999997 999999999965 56677788999874
|
| >d2cdqa1 c.73.1.3 (A:25-328) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.76 E-value=1.8e-08 Score=96.61 Aligned_cols=114 Identities=15% Similarity=0.166 Sum_probs=87.7
Q ss_pred cccccCCCCCcceeeeeeecccEEEEEecccccCCCcceeeeEeee-----CHHHHHHHhcCCceEEEcCc-ccC-CCCC
Q 013702 23 NIRRHGDSSRWHEVGVSVASGNFLAAKRKGVVDGVDYGATGEVKKV-----DVTRMRERLDGGCLVILSNL-GYS-SSGE 95 (438)
Q Consensus 23 ~l~~~g~~~~~~avgl~g~~g~~i~a~~~~~~~~~d~g~vG~v~~v-----~~~~i~~ll~~g~IPVi~~i-~~~-~~g~ 95 (438)
.|+..|.+ |.-+.+.+-.+++....+ .+++... ....+..+++.+.|||++++ |.+ ++|+
T Consensus 134 ~L~~~gi~----a~~~d~~~~~iit~~~~~---------~a~~~~~~~~~~~~~~~~~~~~~~~v~vv~Gfig~~~~~G~ 200 (304)
T d2cdqa1 134 YLNTIGVK----ARQYDAFEIGFITTDDFT---------NGDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGA 200 (304)
T ss_dssp HHHHTTCC----EEEECGGGTTCEECSCST---------TCCBCTTHHHHHHHHHHHHHHHSCCEEEEESSEEEETTTCC
T ss_pred HHHHcCCc----eEEEeecccccccccccc---------cccccccchhhhHHHHhhhhhccCcEEEeeccccccCcCCc
Confidence 56677765 777777776666643322 2233222 24456677899999999986 766 6899
Q ss_pred eeec---ChHHHHHHHHHHcCCCEEEEEecCccc---cC----CCcccccCCHHHHHHHHHhhh
Q 013702 96 VLNC---NTYEVATACALAIEADKLICIIDGPIL---DE----SGHLIRFLTLQEADSLIRQRV 149 (438)
Q Consensus 96 ~~ni---naD~~A~~lA~aL~A~~li~ltdv~g~---~~----~~~~i~~l~~~e~~~l~~~g~ 149 (438)
+.++ .+|..|+.+|.+|+|+.+.+.|||+|+ || +.++|++||++|+.+|..-|.
T Consensus 201 ~ttLGRgGSD~TAa~la~~l~A~~~~iwtDV~Gi~taDPr~v~~a~~i~~lsy~EA~ela~~Ga 264 (304)
T d2cdqa1 201 VTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFGA 264 (304)
T ss_dssp EEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCCBCCEEEHHHHHHHHHHHS
T ss_pred eeeeccCccccHHHHHHHHhCchHHHHhcCcchheeccccccCCceEcCccCHHHHHHHHhCCC
Confidence 9988 489999999999999999999999988 43 589999999999999987664
|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Mycothiol synthase MshD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.57 E-value=2.2e-08 Score=94.35 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=84.8
Q ss_pred ECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC------cEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECcccc
Q 013702 282 TAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD------SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECR 355 (438)
Q Consensus 282 ~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~------~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yR 355 (438)
.++++|.+.+.+|+.......-..+...+.+....+ .+++...+|++|||+.+.+. ++....+..++|+|+||
T Consensus 7 ~l~~~d~~~v~~l~~~~~~~d~~~p~~e~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~-~~~~~~~~~~~V~P~~R 85 (308)
T d1p0ha_ 7 ALTADEQRSVRALVTATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPP-RGAGGAMAELVVHPQSR 85 (308)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHSSCSSCHHHHHHTTSSSSEEEEEECSSTTCCEEEEEEEECC----CCCEEEEEECGGGC
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCccHHHHHhhhccCCCceEEEEEecCCEEEEEEEEEec-CCCceeEEEEEECHHHh
Confidence 488999999999998766543233444444433221 13345568999999998854 33445677899999999
Q ss_pred CCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHHHHHHCCCeEece
Q 013702 356 GQGQGDKLLDYIEKKAASLGLDMLFLLTTRTADWFKSRGFRECSI 400 (438)
Q Consensus 356 gqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~fY~k~GF~~~g~ 400 (438)
++|||++|+++++..+++.++..+......+..+|.++||.....
T Consensus 86 ~~GiG~~Ll~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 130 (308)
T d1p0ha_ 86 RRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASALGLVGVRE 130 (308)
T ss_dssp SSSHHHHHHHHHHHHTTTCCEEEEGGGCHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHHHHHhhhccceecccchhhHHHHHhcccccccc
Confidence 999999999999988877665544333367889999999998653
|
| >d2j0wa1 c.73.1.3 (A:3-294) Aspartokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Aspartokinase species: Escherichia coli [TaxId: 562]
Probab=98.48 E-value=2.4e-07 Score=88.06 Aligned_cols=77 Identities=23% Similarity=0.283 Sum_probs=65.1
Q ss_pred HHHHHhcCCceEEEcCc-ccCCCCCeeec---ChHHHHHHHHHHcCCCEEEEEecCccc---c----CCCcccccCCHHH
Q 013702 72 RMRERLDGGCLVILSNL-GYSSSGEVLNC---NTYEVATACALAIEADKLICIIDGPIL---D----ESGHLIRFLTLQE 140 (438)
Q Consensus 72 ~i~~ll~~g~IPVi~~i-~~~~~g~~~ni---naD~~A~~lA~aL~A~~li~ltdv~g~---~----~~~~~i~~l~~~e 140 (438)
.+...++.+ |||++++ |.+++|++.++ .+|..|+.+|.+|+|+.+.+.|||+|+ | +++++|++||++|
T Consensus 167 ~~~~~~~~~-i~Vv~GFig~~~~G~~ttLGRgGSDytAa~~a~~l~A~~v~iwtDV~Gi~taDP~~v~~A~~i~~lsy~E 245 (292)
T d2j0wa1 167 QLLPRLNEG-LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAE 245 (292)
T ss_dssp HTHHHHHHS-EEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESEEEHHH
T ss_pred hhhhhhccc-ccccccccccccCCceEeeccCcccHHHHHHHHHhhcHHHHHhccCcceeechhhcCCCceEcceeCHHH
Confidence 334444555 8899885 88999999998 489999999999999999999999987 4 3589999999999
Q ss_pred HHHHHHhhh
Q 013702 141 ADSLIRQRV 149 (438)
Q Consensus 141 ~~~l~~~g~ 149 (438)
+.+|..-|.
T Consensus 246 A~ela~~Ga 254 (292)
T d2j0wa1 246 AAEMATFGA 254 (292)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhCCc
Confidence 999976654
|
| >d1z9da1 c.73.1.3 (A:4-241) Uridylate kinase PyrH {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Carbamate kinase-like superfamily: Carbamate kinase-like family: PyrH-like domain: Uridylate kinase PyrH species: Streptococcus pyogenes [TaxId: 1314]
Probab=98.36 E-value=7.9e-08 Score=87.40 Aligned_cols=96 Identities=13% Similarity=0.047 Sum_probs=74.0
Q ss_pred CeeecChHHHHHHHHHHcCCCEEEEEecCcccc-------CCCcccccCCHHHHHHHHHhhhhhhhHHHhHhhhhhcccc
Q 013702 95 EVLNCNTYEVATACALAIEADKLICIIDGPILD-------ESGHLIRFLTLQEADSLIRQRVKQSEIAANYVKAVAEEDI 167 (438)
Q Consensus 95 ~~~ninaD~~A~~lA~aL~A~~li~ltdv~g~~-------~~~~~i~~l~~~e~~~l~~~g~~~~~~~~~~~~~~~~~~~ 167 (438)
.....|.|.+|+.+|..++|+.++++|||+|++ ++.++++.++..|...
T Consensus 135 ~~~~~~~d~~~~~~a~~~~a~~li~~tdVdGvy~~~P~~~~~a~~~~~~~~~~~~~------------------------ 190 (238)
T d1z9da1 135 SPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGEVIK------------------------ 190 (238)
T ss_dssp CTTCCHHHHHHHHHHHTTCSEEEEEESSCCSCBSSCTTTCTTCCBCSEEEHHHHHT------------------------
T ss_pred ccCCCCchHHHHHHHHHhhhhhhcccccccceecccccccccchhhccccccchhc------------------------
Confidence 344567899999999999999999999999883 3467777776544211
Q ss_pred cccCCCCCCccccccCCCCccchhhhccccCCCccCCCCCCccccccccccccchhhhcccchHHHHHHHHHHHcCCCeE
Q 013702 168 TCFGHSDSIGSVYSSQNGKTFSERRIATFNNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRRGVQRV 247 (438)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 247 (438)
.| + |..|+.||..|.++|++ +
T Consensus 191 ------------------------------------~g-~---------------------~~~k~~Aa~~a~~~gi~-v 211 (238)
T d1z9da1 191 ------------------------------------RG-L---------------------KIMDATASTLSMDNDID-L 211 (238)
T ss_dssp ------------------------------------TT-C---------------------CCSCHHHHHHHHHTTCE-E
T ss_pred ------------------------------------cC-c---------------------chhHHHHHHHHHHCCCc-E
Confidence 11 1 22389999999999995 9
Q ss_pred EeeccccCceeeeehhhcCCCcccccC
Q 013702 248 HLLDGTIGGVLLLELFKRDGMGTMVAS 274 (438)
Q Consensus 248 ~i~~g~~~~~ll~el~~~~g~GT~i~~ 274 (438)
+|+||+.|+.| ..++.++..||.|+.
T Consensus 212 ~I~nG~~p~~i-~~~l~Ge~~GTlIt~ 237 (238)
T d1z9da1 212 VVFNMNEAGNI-QRVVFGEHIGTTVSN 237 (238)
T ss_dssp EEEETTSTTHH-HHHHTTCCCSEEEEC
T ss_pred EEEeCCCcchH-HHHHCCCCCceEecc
Confidence 99999999975 566778889999875
|
| >d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Autoinducer synthesis protein LasI species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.29 E-value=3.6e-06 Score=74.97 Aligned_cols=115 Identities=9% Similarity=0.136 Sum_probs=83.2
Q ss_pred CccCHHHHHHHHHHHHHcCc--CCc----CCHHHHHhhcCcEEEEEECCEEEEEEEEeeec-------------------
Q 013702 284 KVTDLSGIKQIIQPLVESGA--LVR----RTDEELLKALDSFYVVEREGQIIACAALFPFF------------------- 338 (438)
Q Consensus 284 t~~D~~~I~~L~~~~~~~~~--~~~----~~~e~l~~~~~~~~V~~~dg~iVG~~~l~~~~------------------- 338 (438)
+.++++.+.+|....+-+.. ..+ ...+++...-.+++++..++++|||+.+.+..
T Consensus 15 ~~~~l~~~~rlR~~VFv~E~gw~~~~~~g~E~D~~D~~~~~~lv~~~~g~~vG~~Rl~~~~~~~~~~~~~~~~~~~~~~~ 94 (197)
T d1ro5a_ 15 DKKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAP 94 (197)
T ss_dssp CHHHHHHHHHHHHHHHTTCSSSCCCEETTEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCC
T ss_pred CHHHHHHHHHHHHHHHHhhhCCCCCCCcccccccCCCcccEEEEeccccceEEEEEeecCCCCCcccccchhhhcCcccc
Confidence 34456677777666655432 111 11223332223566777889999999987421
Q ss_pred -CCCeEEEEEEEECccccCC----cHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEe
Q 013702 339 -KEKCGEVAAIGVSPECRGQ----GQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 398 (438)
Q Consensus 339 -~~~~~~I~~v~V~p~yRgq----GiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~ 398 (438)
.+..+++..++|+|++|++ .++..|+..+.++|.++|++.++..+ +...+||+++||...
T Consensus 95 ~~~~i~E~sR~aV~~~~r~~~r~~~~~~~L~~~~~~~a~~~G~~~~~~~~~~~~~r~~~r~G~~~~ 160 (197)
T d1ro5a_ 95 CSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDVS 160 (197)
T ss_dssp CCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEEE
T ss_pred CCCceEEEEEEEEccccccccchhHHHHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHCCCcEE
Confidence 2367899999999999555 48899999999999999999998877 678999999999654
|
| >d1ylea1 d.108.1.8 (A:1-338) Arginine N-succinyltransferase, alpha chain, AstA {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: AstA-like domain: Arginine N-succinyltransferase, alpha chain, AstA species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.90 E-value=2.9e-05 Score=73.70 Aligned_cols=147 Identities=14% Similarity=0.138 Sum_probs=90.7
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc-----------------CcEEEEEE--CCEEEEEEEEeee
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-----------------DSFYVVER--EGQIIACAALFPF 337 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~-----------------~~~~V~~~--dg~iVG~~~l~~~ 337 (438)
|+.|||++.+|+++|++|-...-..-...|.+++.+.+.+ .+.+|.++ .++|||++++...
T Consensus 1 MlviRpv~~~Dl~~L~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~Sf~~~~~~~~~~~YlFVLED~~~g~vvGts~I~a~ 80 (338)
T d1ylea1 1 MLVMRPAQAADLPQVQRLAADSPVGVTSLPDDAERLRDKILASEASFAAEVSYNGEESYFFVLEDSASGELVGCSAIVAS 80 (338)
T ss_dssp CEEEEECCGGGHHHHHHHHHHSCTTCTTSCSCHHHHHHHHHHHHHHHHCTTCCCSCCEEEEEEEETTTCCEEEEEEEESS
T ss_pred CeEEEeCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhccCCCCCCccEEEEEEeCCCCeEEEEEeEEEe
Confidence 4679999999999999996543222122455555544332 14567776 5899999998520
Q ss_pred -----------------------------------cCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH---CCCCEE
Q 013702 338 -----------------------------------FKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS---LGLDML 379 (438)
Q Consensus 338 -----------------------------------~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~---~g~~~l 379 (438)
...+..+|+.++++|+||+.|.|+.|-+.-.-++.+ +--+++
T Consensus 81 vG~~~Pfy~yr~~~~vh~S~~L~~~~~~~~L~L~~d~tg~sEl~tLfL~p~~R~~~~G~LLS~~RfLFmA~~~~rF~~~v 160 (338)
T d1ylea1 81 AGFSEPFYSFRNETFVHASRSLSIHNKIHVLSLCHDLTGNSLLTSFYVQRDLVQSVYAELNSRGRLLFMASHPERFADAV 160 (338)
T ss_dssp TTSSSCCCEEEEEEEEEEETTTTEEEEEEEEEEECTTTTSEEEEEEEECGGGTTSHHHHHHHHHHHHHHHHCGGGSCSEE
T ss_pred ecCCCCcEEEEeCceeecccccCCccccceEEEeccCCCCeeEEEEEECHHHcCCcchhHHHHHHHHHHHHhHHhhhhhh
Confidence 112667999999999999999999988876666644 455677
Q ss_pred EEEc------HHHHHHHHHCCCeEeceeccchHhhhhhcCCCCceEEEEccCCC
Q 013702 380 FLLT------TRTADWFKSRGFRECSIEMIPEERRKRINLSRNSKYYMKKLLPD 427 (438)
Q Consensus 380 ~l~t------~~a~~fY~k~GF~~~g~~~lp~~~~~~y~~~r~s~~~~k~ll~~ 427 (438)
+.+- ...-.||+.+|=+..+.+. +. ..|--...++.|+..++|.
T Consensus 161 iAEmRG~~D~~G~SPFWd~lg~hFF~mdF-~~---AD~Ls~~~~k~FIaeLmP~ 210 (338)
T d1ylea1 161 VVEIVGYSDEQGESPFWNAVGRNFFDLNY-IE---AEKLSGLKSRTFLAELMPH 210 (338)
T ss_dssp EEECCBCCCTTCCCHHHHHTGGGTSCCCH-HH---HHHHHHHC----------C
T ss_pred hhhccCCcCCCCCCchHHHhhCcccCCCh-hH---HHHHHcCCchhhHHhhCCC
Confidence 7766 3446899998866655442 21 2222223567888888875
|
| >d1kzfa_ d.108.1.3 (A:) Acyl-homoserinelactone synthase EsaI {Pantoea stewartii subsp. stewartii [TaxId: 66271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: Autoinducer synthetase domain: Acyl-homoserinelactone synthase EsaI species: Pantoea stewartii subsp. stewartii [TaxId: 66271]
Probab=97.73 E-value=1.3e-05 Score=71.92 Aligned_cols=81 Identities=10% Similarity=0.065 Sum_probs=67.9
Q ss_pred CcEEEEEECCEEEEEEEEeeec------------------CCCeEEEEEEEECccccCC------cHHHHHHHHHHHHHH
Q 013702 317 DSFYVVEREGQIIACAALFPFF------------------KEKCGEVAAIGVSPECRGQ------GQGDKLLDYIEKKAA 372 (438)
Q Consensus 317 ~~~~V~~~dg~iVG~~~l~~~~------------------~~~~~~I~~v~V~p~yRgq------GiG~~Ll~~l~~~a~ 372 (438)
.++++...+|++|||+.+.+.. ....+|+..++|+|++|+. .+...|+..+.++|.
T Consensus 52 ~~~lv~~~~g~~vG~~Rllp~~~~~~l~~~f~~l~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~v~~~L~~~~~~~a~ 131 (210)
T d1kzfa_ 52 TRYILGICEGQLVCSVRFTSLDRPNMITHTFQHCFSDVTLPAYGTESSRFFVDKARARALLGEHYPISQVLFLAMVNWAQ 131 (210)
T ss_dssp CEEEEEEETTEEEEEEEEEETTSCCCCCCCTHHHHTTSCCCSSCEEEEEEEECHHHHHHHHCTTCCHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCeEEEEEEecCCCCCcchhhcchhhccCCCCCCCeEEEEEEEeccccccccccccchHHHHHHHHHHHHHH
Confidence 4567777899999999986521 1257899999999999865 378899999999999
Q ss_pred HCCCCEEEEEc-HHHHHHHHHCCCeE
Q 013702 373 SLGLDMLFLLT-TRTADWFKSRGFRE 397 (438)
Q Consensus 373 ~~g~~~l~l~t-~~a~~fY~k~GF~~ 397 (438)
++|+..++..+ ....++|++.||..
T Consensus 132 ~~Gi~~~~~v~~~~~~r~~~r~G~~~ 157 (210)
T d1kzfa_ 132 NNAYGNIYTIVSRAMLKILTRSGWQI 157 (210)
T ss_dssp HTTCSEEEEEEEHHHHHHHHHHCCCC
T ss_pred HCCCCEEEEEeCHHHHHHHHHCCCCe
Confidence 99999998888 67889999999954
|
| >d1xmta_ d.108.1.1 (A:) Hypothetical protein AT1g77540 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein AT1g77540 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.66 E-value=9.1e-05 Score=57.84 Aligned_cols=63 Identities=16% Similarity=0.061 Sum_probs=48.8
Q ss_pred EEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEcHHHHH-HHHHC
Q 013702 330 ACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLTTRTAD-WFKSR 393 (438)
Q Consensus 330 G~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t~~a~~-fY~k~ 393 (438)
|++.+.....++...|....|.|++||||+|++|++.+++++++.|. +|.-.|+-+.+ |.+|+
T Consensus 20 a~~~y~~~~~~~~i~i~HT~V~~~~rGqGia~~Lv~~al~~ar~~g~-kV~P~Cpyv~~~~~~kh 83 (95)
T d1xmta_ 20 AFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSI-SIIPSCSYVSDTFLPRN 83 (95)
T ss_dssp SEEEEEEETTTTEEEEEEEECCGGGTTSCHHHHHHHHHHHHHHHTTC-EEEECSHHHHHTHHHHC
T ss_pred EEEEEEEeCCCcEEEEEEEEeCcccCCChHHHHHHHHHHHHHHHCCC-EEEEeCHHHHHHHHHhC
Confidence 33343323455678899999999999999999999999999999995 66677765544 66664
|
| >d1lrza3 d.108.1.4 (A:166-244,A:310-412) Methicillin resistance protein FemA {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Methicillin resistance protein FemA species: Staphylococcus aureus [TaxId: 1280]
Probab=96.85 E-value=0.0036 Score=53.65 Aligned_cols=80 Identities=13% Similarity=-0.059 Sum_probs=61.8
Q ss_pred cEEEEEECCEEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEE-c----------HHH
Q 013702 318 SFYVVEREGQIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLL-T----------TRT 386 (438)
Q Consensus 318 ~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~-t----------~~a 386 (438)
.++++..++++||++.+.. ..+.++....+.+++++..+.+..|+..++++|.+.|++..-+. + ...
T Consensus 72 ~l~~a~~~~~~ia~~l~~~--~~~~~~y~~~~~~~~~~~~~~~~ll~~~~i~~a~~~G~~~~D~gG~~~~~~~~~~~~Gl 149 (182)
T d1lrza3 72 LVPLAYINELPISAGFFFI--NPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHGIDRYNFYGVSGKFTEDAEDAGV 149 (182)
T ss_dssp ECEEEEEEEEEEEEEEEEE--CSSCEEEEEEEECGGGGGGCHHHHHHHHHHHHHHHTTCCEEEEEECCSCCSTTCTTHHH
T ss_pred eeeeeecCCccEEEEEEEe--echhheeeeceeccchhhcCchHHHHHHHHHHHHHcCCcEEEecCcCCCCCCCcccchH
Confidence 3567788899999877653 34556666788999999999999999999999999999988663 2 134
Q ss_pred HHHHHHCCCeEec
Q 013702 387 ADWFKSRGFRECS 399 (438)
Q Consensus 387 ~~fY~k~GF~~~g 399 (438)
.+|=+++|=+.+.
T Consensus 150 ~~FK~~fg~~~v~ 162 (182)
T d1lrza3 150 VKFKKGYNAEIIE 162 (182)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHhcCCceee
Confidence 5666667777664
|
| >d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase HAT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.44 E-value=0.026 Score=52.74 Aligned_cols=58 Identities=12% Similarity=0.259 Sum_probs=45.7
Q ss_pred CEEEEEEEEeeec-------------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCCEEEEEc
Q 013702 326 GQIIACAALFPFF-------------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAAS-LGLDMLFLLT 383 (438)
Q Consensus 326 g~iVG~~~l~~~~-------------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~-~g~~~l~l~t 383 (438)
..++|++..+.+. +.....|.++.|.|.|||+|+|+.|++.+-+.+.+ .++..+.++-
T Consensus 180 ~~~~Gy~T~Y~~~~Y~~~~~f~~~~~~~~R~RISQ~LILPPyQ~kG~G~~L~~~iy~~~~~d~~v~eiTVED 251 (315)
T d1boba_ 180 KELIGFVTTYKYWHYLGAKSFDEDIDKKFRAKISQFLIFPPYQNKGHGSCLYEAIIQSWLEDKSITEITVED 251 (315)
T ss_dssp CCEEEEEEEEEECCC---------CCCCEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHCTTEEEEEESS
T ss_pred CcccceeeeeeeeeccccccccccccccccceeEEEEEeCccccCCchHHHHHHHHHHHhcCCCeeeccccC
Confidence 4699999987642 22457899999999999999999999999988865 4555555443
|
| >d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.96 E-value=0.13 Score=44.07 Aligned_cols=103 Identities=15% Similarity=0.099 Sum_probs=66.6
Q ss_pred eEEEECCccCHHHHHHH---HHHHHHcC----cCCcCCHHHHHhhc-------CcEEEEEE--CCEEEEEEEEeeec---
Q 013702 278 EGTRTAKVTDLSGIKQI---IQPLVESG----ALVRRTDEELLKAL-------DSFYVVER--EGQIIACAALFPFF--- 338 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L---~~~~~~~~----~~~~~~~e~l~~~~-------~~~~V~~~--dg~iVG~~~l~~~~--- 338 (438)
+.....+.+|...+.++ ++..+-+. +....+.+.+.-.+ ..++.+.. ++++|||++..|..
T Consensus 46 f~w~~~d~~d~~~l~el~~lL~~nYved~d~~frf~Ys~~~l~w~l~~Pg~~~~~~igvr~~~~~KLvg~Is~~P~~i~i 125 (185)
T d1iica1 46 FEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGV 125 (185)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHSSSCGGGCEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEE
T ss_pred ceEEeeccCCHHHHHHHHHHHHhhccccccceEEeecCHHHheeeecCCCCCcCCEEEEEEccCCcEEEEEeeeEEEEEE
Confidence 35566666666655554 44332221 11233444443222 12333333 57899999987632
Q ss_pred -C--CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCC-EEE
Q 013702 339 -K--EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLD-MLF 380 (438)
Q Consensus 339 -~--~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~-~l~ 380 (438)
+ -...+|..++||+.+|.+|++-.|++.+.+.+...|+- .++
T Consensus 126 ~~~~~~~~~VnFLCVhkk~R~K~lAPvLI~EitRr~n~~~i~qavy 171 (185)
T d1iica1 126 RGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALY 171 (185)
T ss_dssp TTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCCEEE
T ss_pred cCeEEEEEEEEEEEEchhHhhcCCcHHHHHHHHHHhcccCeEEEEE
Confidence 1 26789999999999999999999999999999888873 444
|
| >d1ne9a2 d.108.1.4 (A:165-335) Peptidyltransferase FemX {Weissella viridescens [TaxId: 1629]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: FemXAB nonribosomal peptidyltransferases domain: Peptidyltransferase FemX species: Weissella viridescens [TaxId: 1629]
Probab=94.89 E-value=0.27 Score=40.56 Aligned_cols=101 Identities=14% Similarity=0.103 Sum_probs=65.0
Q ss_pred EEEEC-CccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecCCCeEEEEEEEE
Q 013702 279 GTRTA-KVTDLSGIKQIIQPLVESGALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFKEKCGEVAAIGV 350 (438)
Q Consensus 279 ~IR~a-t~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~~~~~~I~~v~V 350 (438)
.|+.. +.+|++.+.+++.......-..+.+.+.+...+ ..++++..+|++|+.+.+... .+.++...-+.
T Consensus 18 ~i~~~~~~e~~~~f~~l~~~~~~r~g~~~~~~~~~~~l~~~~~~~~~~l~~~~~~g~~va~~l~~~~--~~~~~y~~~a~ 95 (171)
T d1ne9a2 18 EVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRMQAAFDADTMRIFVAEREGKLLSTGIALKY--GRKIWYMYAGS 95 (171)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHSCTTTEEEEEEEETTEEEEEEEEEEE--TTEEEEEEEEE
T ss_pred EEEEcCCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHHhcCCCeEEEEEEEeCCeEEEEEEEEEE--CCEEEEEEccc
Confidence 34443 356778888888776555434445555443322 135677789999988776633 23444434455
Q ss_pred CccccCCcHHHHHHHHHHHHHHHCCCCEEEEE
Q 013702 351 SPECRGQGQGDKLLDYIEKKAASLGLDMLFLL 382 (438)
Q Consensus 351 ~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~ 382 (438)
.+.. ...-+..|+-+++++|+++|++..-+.
T Consensus 96 ~~~~-~~~~~~~L~~~~i~~~~~~G~~~~D~g 126 (171)
T d1ne9a2 96 MDGN-TYYAPYAVQSEMIQWALDTNTDLYDLG 126 (171)
T ss_dssp CSSC-CTTHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cccc-ccccHHHHHHHHHHHHHHcCCcEEEeC
Confidence 5554 455578888999999999999988664
|
| >d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.65 E-value=0.011 Score=48.70 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=47.2
Q ss_pred ECCEEEEEEEEeeec------CCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 324 REGQIIACAALFPFF------KEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 324 ~dg~iVG~~~l~~~~------~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
.++++|||+...|.. .-...+|..++||+++|.+|++-.|++++.+.+...|+-.
T Consensus 64 ~~~kLVgfIs~~P~~i~i~~~~~~~~~InFLCVhKklR~k~lAPvLI~EitRr~n~~gI~q 124 (141)
T d1rxta1 64 SSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQ 124 (141)
T ss_dssp SSSCEEEEECCEECCCCCSSSCCCCEECCCCEECSSCCCSSSHHHHHHHHHHHHTTTTCCC
T ss_pred cCCeEEEEEeceEEEEEEeCCEeEEEEEEEEEEchhHhhcCCcHHHHHHHHHHhhccCeEE
Confidence 579999999987632 2378899999999999999999999999999998877654
|
| >d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.14 E-value=0.25 Score=43.58 Aligned_cols=120 Identities=17% Similarity=0.131 Sum_probs=85.6
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhcC------------cEEEEEE-CCEEEEEEEEeeecC------
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKALD------------SFYVVER-EGQIIACAALFPFFK------ 339 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~~------------~~~V~~~-dg~iVG~~~l~~~~~------ 339 (438)
+|+++++|++.+.+|++.+...-.. ...+.|++.+|+- ..||+++ +++|..|++++-.+.
T Consensus 43 lR~M~~kDv~~V~~LL~~yl~~f~l~~~Ft~eev~Hwflp~~~~~~~~~VI~sYVve~~~g~ITDF~SFY~Lpstvi~~~ 122 (237)
T d1iica2 43 LRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNT 122 (237)
T ss_dssp EEECCGGGHHHHHHHHHHHHTTSSEEECCCHHHHHHHHSCCTTCCGGGCCEEEEEEECTTSCEEEEEEEEECCEEECSCS
T ss_pred cccCchhhHHHHHHHHHHHHHhCcceEecCHHHhhheeccccCCCCCCcEEEEEEEECCCCcEeeEEEEEecchhhhCCC
Confidence 8999999999999999987755333 4568899988871 2567776 688999999875322
Q ss_pred ----CCeEEEEEEEECccccC------------CcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 340 ----EKCGEVAAIGVSPECRG------------QGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 340 ----~~~~~I~~v~V~p~yRg------------qGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
-..+++...+.+-++.- +.-=.+|+..++=.|++.|+.-..+.+ -....|.+++.|-.-.
T Consensus 123 kh~~l~aAY~fYy~~~~~~~~~~~~~~~~~~a~k~~l~~Li~Dali~Ak~~~fDVFNaL~~mdN~~fLe~lKFg~Gd 199 (237)
T d1iica2 123 KYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGD 199 (237)
T ss_dssp SCSEECEEEEEEEEECTTTTSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred CcceEEEEEEEEEeeccccccccccchhhhhhhcchHHHHHHHHHHHHHHcCCcEEEeccccccHHHHHHcCCccCC
Confidence 16677766666655432 123445666666678999999887776 2345799999999754
|
| >d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Yeast (Candida albicans) [TaxId: 5476]
Probab=94.09 E-value=0.31 Score=40.65 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=64.9
Q ss_pred EEEECCccCHHHHH---HHHHHHHHcC----cCCcCCHHHHHhhcC------c-EEEEE--ECCEEEEEEEEeee----c
Q 013702 279 GTRTAKVTDLSGIK---QIIQPLVESG----ALVRRTDEELLKALD------S-FYVVE--REGQIIACAALFPF----F 338 (438)
Q Consensus 279 ~IR~at~~D~~~I~---~L~~~~~~~~----~~~~~~~e~l~~~~~------~-~~V~~--~dg~iVG~~~l~~~----~ 338 (438)
.-.....+|-..+. .|+...+-+. |....+.+-+.-.+. . ...+. .++++|||+...|. .
T Consensus 25 eW~~~d~~d~~~l~ely~lL~~nYVeDdd~~frf~YS~efL~WaL~~Pg~~~~w~vgvR~~~~~kLvgfIs~~P~~i~i~ 104 (165)
T d1iyka1 25 EWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKYSHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLN 104 (165)
T ss_dssp EEEECCTTSHHHHHHHHHHHHHHSCBCTTSSEEECCCHHHHHHHHCSTTCCGGGEEEEEETTTCCEEEEEEEEEEEEEET
T ss_pred EEEEecCCCHHHHHHHHHHHHhhcccCccceEEEecCHHHhhhhhcCCCCCccceEEEEEccCCcEEEEEecceEEEEEe
Confidence 44555555555554 4444433222 113345555543332 2 22232 35889999998763 1
Q ss_pred C-C---CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCE
Q 013702 339 K-E---KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDM 378 (438)
Q Consensus 339 ~-~---~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~ 378 (438)
. + +..+|..++||+.+|.++++-.|++.+.+.+...|+-.
T Consensus 105 ~~~~~~~~~~INFLCVhKklR~KrlAPvLI~EitRr~n~~gI~q 148 (165)
T d1iyka1 105 KSNKVIDSVEINFLCIHKKLRNKRLAPVLIKEITRRVNKQNIWQ 148 (165)
T ss_dssp TTTEEEEEEEEEEEEECGGGTTSSCHHHHHHHHHHHHHTTTCCC
T ss_pred cCCcEEEEEEEEEEEEchhHhhcCCcHHHHHHHHHHhhccCeEE
Confidence 1 2 56899999999999999999999999999998888654
|
| >d2d4pa1 d.108.1.1 (A:1-130) Hypothetical protein TTHA1254 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Hypothetical protein TTHA1254 species: Thermus thermophilus [TaxId: 274]
Probab=93.99 E-value=0.56 Score=36.47 Aligned_cols=110 Identities=17% Similarity=0.140 Sum_probs=81.3
Q ss_pred eEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHH--HHhhcCcEEEEEECCEEEEEEEEeeecCCC--eEEEEEEEECcc
Q 013702 278 EGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEE--LLKALDSFYVVEREGQIIACAALFPFFKEK--CGEVAAIGVSPE 353 (438)
Q Consensus 278 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~--l~~~~~~~~V~~~dg~iVG~~~l~~~~~~~--~~~I~~v~V~p~ 353 (438)
+.+|+.+..|++.+.++- + ..+.+... +...-.+.|++++++.+.||+.....++.. ...+..+ +
T Consensus 1 mr~r~f~e~d~d~L~~~~------g-~~~~sl~alrfyeRsgHsF~Aed~e~~~Gf~lAQavWqGdrptVl~~r~----~ 69 (130)
T d2d4pa1 1 MRFRPFTEEDLDRLNRLA------G-KRPVSLGALRFFARTGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRI----E 69 (130)
T ss_dssp CEEECCCGGGHHHHHHTS------T-TSCCCHHHHHHHHHHSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEE----E
T ss_pred CcccccCchhHHHHHHHh------c-cCCCCHHHhhhhhhcCcceeeecCCceeeEeeehhhhcCCCceEEEEec----C
Confidence 468999999999986661 1 12334433 444557899999999999999877655443 3344444 4
Q ss_pred ccCCcHHHHHHHHHHHHHHHCCCCEEEEEc----HHHHHHHHHCCCeEe
Q 013702 354 CRGQGQGDKLLDYIEKKAASLGLDMLFLLT----TRTADWFKSRGFREC 398 (438)
Q Consensus 354 yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t----~~a~~fY~k~GF~~~ 398 (438)
-+..+...-||+.+.+-|=+.++..+.+.. +.+.++-+..||...
T Consensus 70 ~~~ee~~~gLL~AvvKSAYDaaVYev~~~ldpa~~a~~~a~ea~~~~~g 118 (130)
T d2d4pa1 70 GRSVEALRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFALG 118 (130)
T ss_dssp ESSHHHHHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCCC
T ss_pred CCcHHHHHHHHHHHHHHhhcceeeEEeeccCHHHHHHHHHHHhhccccC
Confidence 456788888999999999889998888776 467899999998864
|
| >d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Yeast (Candida albicans) [TaxId: 5476]
Probab=93.85 E-value=0.14 Score=45.11 Aligned_cols=120 Identities=17% Similarity=0.137 Sum_probs=84.9
Q ss_pred EEECCccCHHHHHHHHHHHHHcCcC-CcCCHHHHHhhc--C---------cEEEEE-ECCEEEEEEEEeeecC-----C-
Q 013702 280 TRTAKVTDLSGIKQIIQPLVESGAL-VRRTDEELLKAL--D---------SFYVVE-REGQIIACAALFPFFK-----E- 340 (438)
Q Consensus 280 IR~at~~D~~~I~~L~~~~~~~~~~-~~~~~e~l~~~~--~---------~~~V~~-~dg~iVG~~~l~~~~~-----~- 340 (438)
+|+++++|++.+.+|++.....-.. ...+.|++.+|+ . ..||++ ++++|..|++++-.+. .
T Consensus 43 lR~M~~kDv~~V~~LL~~yl~~f~l~~~F~~eev~Hwflp~~~~~~~~Vi~sYVve~~~g~ItDF~SFY~Lpstvi~~~~ 122 (227)
T d1iyka2 43 LRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEEFKHWMLGHDENSDSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQ 122 (227)
T ss_dssp EEECCGGGHHHHHHHHHHHHTTSSEEEECCHHHHHHHHHCSCSSSCCSSEEEEEEECTTSCEEEEEEEEECCEEESSCSS
T ss_pred cccCchhhHHHHHHHHHHHHHcCcceEecCHHHHHHhhcCccccCCCCeEEEEEEECCCCcEeEEEEEeeccHHhhCCCc
Confidence 8999999999999999987655322 456889999887 1 257776 4789999999875321 1
Q ss_pred ----CeEEEEEEEECccc--cCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEec
Q 013702 341 ----KCGEVAAIGVSPEC--RGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFRECS 399 (438)
Q Consensus 341 ----~~~~I~~v~V~p~y--RgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~g 399 (438)
..+++...+-+.-. .-+.-=.+|+..++=.|++.|+.-..+.. -....|.+++.|-.-.
T Consensus 123 h~~l~aAY~fY~~~~~~~~~~~k~~l~~Li~Dali~Ak~~~fDVFNaL~~mdN~~fLe~lKFg~Gd 188 (227)
T d1iyka2 123 HDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKFGSGD 188 (227)
T ss_dssp CSEECEEEEEEEEETTTTSTTHHHHHHHHHHHHHHHHGGGTCSEEEEESCTTGGGTTTTTTCEEEE
T ss_pred cceEEEEEEEEEEeecccchhhhhhHHHHHHHHHHHHHHcCCcEEEcccccccHHHHHHcCCccCC
Confidence 56676444443211 22334566777778788999999877766 2345799999999854
|
| >d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase MYST1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Probable histone acetyltransferase MYST1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.83 E-value=0.1 Score=47.10 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=62.2
Q ss_pred CCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC--cEEEE-EEC---CEEEEEEEEeeecCC
Q 013702 267 GMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVV-ERE---GQIIACAALFPFFKE 340 (438)
Q Consensus 267 g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~--~~~V~-~~d---g~iVG~~~l~~~~~~ 340 (438)
..|..|.++..+.+..+.=..-...-+-+- +...-|+... .+.-++. .|||+ +.| ..+|||-+-... ..
T Consensus 59 PPG~eIYr~~~~si~EVDG~~~~~yCqnLc-LlaKLFLdhK---tl~ydV~~F~FYVl~e~d~~g~h~vGYFSKEk~-s~ 133 (271)
T d2giva1 59 PPGKEIYRKSNISVHEVDGKDHKIYCQNLC-LLAKLFLDHK---TLYFDVEPFVFYILTEVDRQGAHIVGYFSKEKE-SP 133 (271)
T ss_dssp CSSEEEEEETTEEEEEEETTTSHHHHHHHH-HHHHTTCSCC---SCTTCCTTEEEEEEEEECSSCEEEEEEEEEESS-CT
T ss_pred CCcceEeecCCEEEEEeeCccchhhhhHHH-HHHHHhcccc---eeeecCCceEEEEEEEecCCCceEEEeeeeEec-cC
Confidence 457777777766776665443332222211 1111122110 0111222 24444 333 249999887643 33
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCC
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLG 375 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g 375 (438)
+..-+.++.|.|.||++|+|+.|++..-..++..|
T Consensus 134 ~~~NLsCIltlP~yQrkGyG~lLI~fSYeLSr~E~ 168 (271)
T d2giva1 134 DGNNVACILTLPPYQRRGYGKFLIAFSYELSKLES 168 (271)
T ss_dssp TCEEESCEEECGGGCSSSHHHHHHHHHHHHHHHTT
T ss_pred CCceeeeeeccCHHHhcCHhHhHHhhhhhhhhccC
Confidence 45789999999999999999999999998887766
|
| >d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase MYST3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.47 E-value=0.26 Score=44.36 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=62.1
Q ss_pred CCCcccccCCceeEEEECCccCHHHHHHHHHHHHHcCcCCcCCHHHHHhhcC--cEEEE-EECC---EEEEEEEEeeecC
Q 013702 266 DGMGTMVASDLYEGTRTAKVTDLSGIKQIIQPLVESGALVRRTDEELLKALD--SFYVV-EREG---QIIACAALFPFFK 339 (438)
Q Consensus 266 ~g~GT~i~~d~~~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~e~l~~~~~--~~~V~-~~dg---~iVG~~~l~~~~~ 339 (438)
...|..|.++..+.|..+.=..-+...+-+. +...-|+... .+..++. .|||+ +.|+ .+||+-+-... .
T Consensus 58 ~PPG~eIYr~~~~sifEVDG~~~~~yCqnLc-LlaKLFLd~K---tl~~DVd~F~FYVl~e~d~~g~h~vGyFSKEk~-s 132 (270)
T d2ozua1 58 HPPANEIYRKNNISVFEVDGNVSTIYCQNLC-LLAKLFLDHK---TLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEKH-C 132 (270)
T ss_dssp SCSSEEEEEETTEEEEEEETTTSHHHHHHHH-HHHHTTCSCC---CCTTCCTTEEEEEEEEEETTEEEEEEEEEEESS-C
T ss_pred CCCCceeeecCCeEEEEeeCCcChhHHhHHH-HHHHHhccCc---ceeccCCceEEEEEEEecCCCcEEEeecceecc-c
Confidence 3456777776666666655433332222211 1222222110 0111222 24444 3332 58898776532 2
Q ss_pred CCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCC
Q 013702 340 EKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376 (438)
Q Consensus 340 ~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~ 376 (438)
....-+.++.|.|.||++|+|+.|++..-..++..|.
T Consensus 133 ~~~~NLsCIltLP~~QrkGyG~lLI~fSYeLSr~Eg~ 169 (270)
T d2ozua1 133 QQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQ 169 (270)
T ss_dssp TTCEEESEEEECGGGTTSSHHHHHHHHHHHHHHHTTC
T ss_pred ccCceeeeeeccchhhhcchhHHHHHHhhhhhhccCC
Confidence 3446799999999999999999999999999987663
|
| >d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Histone acetyltransferase ESA1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.75 E-value=0.18 Score=45.47 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=39.6
Q ss_pred EEEEEEEEeeecCCCeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCC
Q 013702 327 QIIACAALFPFFKEKCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGL 376 (438)
Q Consensus 327 ~iVG~~~l~~~~~~~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~ 376 (438)
.+|||-+-... ..+..-+.++.|.|.||++|+|+.|++..-..++..|.
T Consensus 124 h~vGyFSKEk~-s~~~nNLaCIltLP~~QrkGyG~~LI~fSYeLSr~E~~ 172 (273)
T d1fy7a_ 124 HLVGYFSKEKE-SADGYNVACILTLPQYQRMGYGKLLIEFSYELSKKENK 172 (273)
T ss_dssp EEEEEEEEESS-CTTCEEESCEEECGGGCSSSHHHHHHHHHHHHHHHTTC
T ss_pred eeeeecceecc-ccCCceeEEEEecChHHhcchhhhHHHHHHHHhhhccc
Confidence 58888766532 22446799999999999999999999999999987653
|
| >d1rxta2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-myristoyl transferase, NMT domain: N-myristoyl transferase, NMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.32 E-value=0.13 Score=44.55 Aligned_cols=115 Identities=16% Similarity=0.178 Sum_probs=79.0
Q ss_pred EEEECCccCHHHHHHHHHHHHHcC-cCCcCCHHHHHhhcC------cEEEEE-ECCEEEEEEEEeeecCC----------
Q 013702 279 GTRTAKVTDLSGIKQIIQPLVESG-ALVRRTDEELLKALD------SFYVVE-REGQIIACAALFPFFKE---------- 340 (438)
Q Consensus 279 ~IR~at~~D~~~I~~L~~~~~~~~-~~~~~~~e~l~~~~~------~~~V~~-~dg~iVG~~~l~~~~~~---------- 340 (438)
.+|+++++|++.+.+|++.....- .....+.+++.+|+- ..+|++ .+|++-.|++++-.+..
T Consensus 42 glR~m~~kDv~~v~~Ll~~yl~~f~l~~~f~~eev~Hwflp~~~Vi~syVve~~~g~itDf~SFY~lpstvi~~~~~~~l 121 (201)
T d1rxta2 42 GLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSL 121 (201)
T ss_dssp TEEECCGGGSHHHHHHHHHHSTTSSBCCCCCTTTTTTSSSCCSSSEEEEEECCSSSCCCCEEEEECCCBCCCSCSSCCCC
T ss_pred ccccCcHhhHHHHHHHHHHHHhcCceEEecCHHHhheeeccCCCEEEEEEEECCCCcEeeEEEEEEcchhhhCCccccee
Confidence 399999999999999998876443 234457888888872 255665 36899999998754321
Q ss_pred CeEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc-HHHHHHHHHCCCeEe
Q 013702 341 KCGEVAAIGVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT-TRTADWFKSRGFREC 398 (438)
Q Consensus 341 ~~~~I~~v~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t-~~a~~fY~k~GF~~~ 398 (438)
..+++. ..+.-..+= ..|++.++-.|++.|+.-..+.. -....|.+++.|-+-
T Consensus 122 ~aAY~f-Y~~~~~~~l----~~Li~Dali~Ak~~~fDVfNaL~i~dN~~fL~~lKFg~G 175 (201)
T d1rxta2 122 KAAYSF-YNVHTQTPL----LDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIG 175 (201)
T ss_dssp CBCCCC-CEECSSSCT----TTHHHHHHHHHHHTTCSBCCCCCCTTHHHHTTTSSCCCC
T ss_pred eeEEEE-EEeecCCcH----HHHHHHHHHHHHHcCCcEEEecchhcCHHHHHHCCCccC
Confidence 334442 233322221 25999999999999988765554 334579999999874
|
| >d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: EF1021-like domain: Putative acetyltransferase Ava4977 species: Anabaena variabilis [TaxId: 1172]
Probab=80.31 E-value=5 Score=35.27 Aligned_cols=115 Identities=5% Similarity=-0.056 Sum_probs=72.4
Q ss_pred eeEEEECCccCHHHHHHHHHHHHHc-CcCCcCCHHHHHhhc-------CcEEEEEECCEEEEEEEEeeecC--CCeEEEE
Q 013702 277 YEGTRTAKVTDLSGIKQIIQPLVES-GALVRRTDEELLKAL-------DSFYVVEREGQIIACAALFPFFK--EKCGEVA 346 (438)
Q Consensus 277 ~~~IR~at~~D~~~I~~L~~~~~~~-~~~~~~~~e~l~~~~-------~~~~V~~~dg~iVG~~~l~~~~~--~~~~~I~ 346 (438)
...+++++..|.+.+.++++..... .....++...+...+ ...++..++++++||+.+..... .+...|.
T Consensus 145 ~~~~~~~~~~d~~~l~~ly~~~~~~~~g~~~R~~~~w~~~~~~~~~~~~~~~~~~~~~~~~Gy~iy~~~~~~~~~~l~I~ 224 (283)
T d2ozga2 145 SLPLEPVVLKNNPIFHELYQQQAQLTHGYLDRHPAIWQGLNRTLDTETLYSYLIGDKDKPQGYIIFTQERTRDGSILRIR 224 (283)
T ss_dssp CSCEEECCCTTCHHHHHHHHHHHHHSTTCEECCHHHHHHHTCCCTTCCCEEEEEEETTEEEEEEEEEEEECSSCEEEEEE
T ss_pred CCceeEeehhcccchHHHHHHHHHhCCccccCCHHHHHHHHhhcccCceEEEEEecCCcEEEEEEEEEecCCCCceEEEe
Confidence 3458999999999999998775443 334455655554433 24677788999999998765432 2334454
Q ss_pred EE-EECccccCCcHHHHHHHHHHHHHHHCCCCEEEEEc---HHHHHHHHHCCCeEe
Q 013702 347 AI-GVSPECRGQGQGDKLLDYIEKKAASLGLDMLFLLT---TRTADWFKSRGFREC 398 (438)
Q Consensus 347 ~v-~V~p~yRgqGiG~~Ll~~l~~~a~~~g~~~l~l~t---~~a~~fY~k~GF~~~ 398 (438)
.+ +.+++ ....|+..+..+.. ....+.+.+ .+...++++.|++..
T Consensus 225 el~a~~~~-----a~~~Ll~~l~~~~~--~~~~v~~~~p~dd~l~~lL~~~~~~~~ 273 (283)
T d2ozga2 225 DWVTLSNP-----AVQSFWTFIANHRS--QIDKVTWKSSVIDALTLLLPEQSATIR 273 (283)
T ss_dssp EEEECSHH-----HHHHHHHHHHTTTT--TCSEEEEEECTTCSGGGGSSSCCCEEE
T ss_pred eeccCCHH-----HHHHHHHHHHhccc--cceEEEEeCCCCCcHHHHhcCCCCceE
Confidence 44 44554 34566666555432 245677666 245567777888754
|