Citrus Sinensis ID: 013777
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 436 | 2.2.26 [Sep-21-2011] | |||||||
| Q7Z9L3 | 405 | Glucan 1,3-beta-glucosida | yes | no | 0.694 | 0.748 | 0.321 | 4e-39 | |
| B8N151 | 405 | Probable glucan 1,3-beta- | N/A | no | 0.694 | 0.748 | 0.321 | 4e-39 | |
| Q12700 | 425 | Glucan 1,3-beta-glucosida | N/A | no | 0.674 | 0.691 | 0.325 | 2e-38 | |
| Q12725 | 421 | Glucan 1,3-beta-glucosida | yes | no | 0.697 | 0.722 | 0.300 | 2e-38 | |
| B0XN12 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.685 | 0.718 | 0.335 | 3e-37 | |
| Q4WK60 | 416 | Probable glucan 1,3-beta- | yes | no | 0.685 | 0.718 | 0.335 | 4e-37 | |
| P29717 | 438 | Glucan 1,3-beta-glucosida | N/A | no | 0.665 | 0.662 | 0.308 | 4e-37 | |
| A1D4Q5 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.699 | 0.733 | 0.355 | 4e-37 | |
| Q96V64 | 426 | Glucan 1,3-beta-glucosida | N/A | no | 0.658 | 0.673 | 0.336 | 9e-37 | |
| A1CRV0 | 415 | Probable glucan 1,3-beta- | N/A | no | 0.816 | 0.857 | 0.323 | 1e-36 |
| >sp|Q7Z9L3|EXGA_ASPOR Glucan 1,3-beta-glucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=exgA PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 49/352 (13%)
Query: 120 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 179
PS+F + E+ +T G ++A L HW S+++ DF+ ++ G+N VRIP+G
Sbjct: 48 PSIFDAAGAEAVD-EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIG 106
Query: 180 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239
+W A P P+V G + LD A +WA G+KV++DLH APGSQNG ++S R Q
Sbjct: 107 YW-ALGPLEGDPYVDGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRRGAIQW 165
Query: 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKY 298
V T+ D LA RY ++AAIE INEP P GV L+ YY + Y V KY
Sbjct: 166 QQGDTVEQTLDAFDLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNKY 225
Query: 299 TSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQR 358
+ V+ + P + F + S+VV+D H+Y++F N +++ +ID V
Sbjct: 226 NAGTSVVYGDGFLPVESWN--GFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQFA 283
Query: 359 ASDLGAVTTSNGPLTFVGEWT-------------------------------CE------ 381
L A S+ P+ VGEWT C
Sbjct: 284 HQHLEA---SDKPV-IVGEWTGAVTDCAKYLNGKGNGARYDGSYAADKAIGDCSSLATGF 339
Query: 382 -WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 431
+ D + D +RF AQLD + + GW +W K E A W + ++E G
Sbjct: 340 VSKLSDEERSDMRRFIEAQLDAFELKS-GWVFWTWKTEGAPGWDMSDLLEAG 390
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 8 |
| >sp|B8N151|EXGA_ASPFN Probable glucan 1,3-beta-glucosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 49/352 (13%)
Query: 120 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 179
PS+F + E+ +T G ++A L HW S+++ DF+ ++ G+N VRIP+G
Sbjct: 48 PSIFDAAGAEAVD-EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIG 106
Query: 180 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239
+W A P P+V G + LD A +WA G+KV++DLH APGSQNG ++S R Q
Sbjct: 107 YW-ALGPLEGDPYVDGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRRGAIQW 165
Query: 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKY 298
V T+ D LA RY ++AAIE INEP P GV L+ YY + Y V KY
Sbjct: 166 QQGDTVEQTLDAFDLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNKY 225
Query: 299 TSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQR 358
+ V+ + P + F + S+VV+D H+Y++F N +++ +ID V
Sbjct: 226 NAGTSVVYGDGFLPVESWN--GFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQFA 283
Query: 359 ASDLGAVTTSNGPLTFVGEWT-------------------------------CE------ 381
L A S+ P+ VGEWT C
Sbjct: 284 HQHLEA---SDKPV-IVGEWTGAVTDCAKYLNGKGNGARYDGSYAADKAIGDCSSLATGF 339
Query: 382 -WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 431
+ D + D +RF AQLD + + GW +W K E A W + ++E G
Sbjct: 340 VSKLSDEERSDMRRFIEAQLDAFELKS-GWVFWTWKTEGAPGWDMSDLLEAG 390
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) (taxid: 332952) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q12700|EXG_SCHOC Glucan 1,3-beta-glucosidase OS=Schwanniomyces occidentalis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 161/335 (48%), Gaps = 41/335 (12%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY T G D A QVL+ HW ++ + DFK + G+NAVRIP+G+W A P+V
Sbjct: 78 EYHFTQKLGKDAAQQVLEQHWKTWYKENDFKMMLKYGLNAVRIPIGYW-AFKLLDYDPYV 136
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD--GFQEWGDSNVADTVAV 251
G K LD A DWA KY +KV +DLH APGSQNG ++S RD GFQ+ +NV T+ V
Sbjct: 137 QGQVKYLDRALDWARKYNLKVWIDLHGAPGSQNGFDNSGLRDSLGFQQ--GNNVNFTLEV 194
Query: 252 IDFLAARYAN---RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308
++ + +Y + IEL+NEPL P + L+ LK +++ GY +R S VI+ +
Sbjct: 195 LEIIGKKYGGPEYEDVVIGIELLNEPLGPSLDLNYLKEFFQQGYQNLRNSGSVQAVIIQD 254
Query: 309 RLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN-----QRASDLG 363
P + + VV+D H+Y +FS ++ +I N ++
Sbjct: 255 AFQPMGYWDNFLTLDQYWNVVVDHHHYQVFSAGELQRSIDDHITVACNWGWDAKKEYHWN 314
Query: 364 AVTTSNGPLTFVGEW---------------------TCEWNVKDAS-----KQDYQRFAN 397
+ LT W +C+ V A+ + + +R+
Sbjct: 315 VAGEWSAALTDCARWLNGVGRGARFSGDFDNSPYFGSCDCYVNIATWPSEYRTNVRRYIE 374
Query: 398 AQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 431
AQLD + T GW +W KCE A W L+ +I G
Sbjct: 375 AQLDAF-EQTGGWFFWNWKCENAIEWDLQGLITAG 408
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Schwanniomyces occidentalis (taxid: 27300) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q12725|EXG_YARLI Glucan 1,3-beta-glucosidase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=EXG1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 171/359 (47%), Gaps = 55/359 (15%)
Query: 120 PSVFKL---NIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSN-GINAVR 175
PS+F+ N + EY T G ++A + L DHW+++IT+ D K ++ N +N VR
Sbjct: 54 PSLFEAFGNNDANVPVDEYHYTAWLGKEEAEKRLTDHWNTWITEYDIKAIAENYKLNLVR 113
Query: 176 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 235
IP+G+W A P P+V G LD A W KYGVK VD+H PGSQNG ++S RD
Sbjct: 114 IPIGYW-AFSLLPNDPYVQGQEAYLDRALGWCRKYGVKAWVDVHGVPGSQNGFDNSGLRD 172
Query: 236 GFQEWGDSNVADTVAVIDFLAARYANRPS---LAAIELINEPLAPGVALDTLKSYYKAGY 292
+ NV ++ VI+++A +Y + IEL+NEPL P + ++ ++ Y++ G+
Sbjct: 173 HWDWPNADNVQHSINVINYIAGKYGAPEYNDIVVGIELVNEPLGPAIGMEVIEKYFQEGF 232
Query: 293 DAVRKYTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI 351
VR S V++ + ++ ++ G VV+D H Y +FS N+ Q+I
Sbjct: 233 WTVRHAGSDTAVVIHDAFQEKNYFNNFMTTEQGFWNVVLDHHQYQVFSPGELARNIDQHI 292
Query: 352 DYVNNQRASDLGAVTTSNGPLTFVGEW-------------------------------TC 380
V N +G ++ GEW +C
Sbjct: 293 AEVCN-----VGRQASTEYHWRIFGEWSAALTDCTHWLNGVGKGPRLDGSFPGSYYQRSC 347
Query: 381 E-------WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 431
+ W+ +D KQ+ +R+ AQLD + GW YW +K E A W + +++NG
Sbjct: 348 QGRGDIQTWSEQD--KQESRRYVEAQLDAWEHGGDGWIYWTYKTENALEWDFRRLVDNG 404
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 170/355 (47%), Gaps = 56/355 (15%)
Query: 120 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 179
PS+F N E+ +T G D+A VL HW ++IT +DF+ ++ G+N VRIP+G
Sbjct: 59 PSIFD-NAGDAAVDEWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIG 117
Query: 180 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239
+W A P +P+V G + LDNA WA + G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 240 W--GDSNVADTVAVIDFLAARYANRPSLA-AIELINEPLAP-GVALDTLKSYYKAGYDAV 295
W GD+ V+ TV LA RY + + AIE +NEP P GV+ L+ YY D V
Sbjct: 176 WQQGDT-VSQTVDAFRALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVV 234
Query: 296 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVN 355
R+ V +S+ G + F +G VV+D H+Y +F N L++ ++
Sbjct: 235 RQIDPDTSVFLSD--GFLSTESWNGFKTG-EDVVMDTHHYEMFDNYLISLDIDGHV---- 287
Query: 356 NQRASDLGAVTTSNGPLTFVGEW-----------------------------------TC 380
+ A D G + VGEW T
Sbjct: 288 -KSACDFGKQIEGSDKPVVVGEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTT 346
Query: 381 EWNVKDASKQ---DYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 431
+ +V D S Q D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 347 QGSVADLSDQERTDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q4WK60|EXGA_ASPFU Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 170/355 (47%), Gaps = 56/355 (15%)
Query: 120 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 179
PS+F N E+ +T G D+A VL HW ++IT +DF+ ++ G+N VRIP+G
Sbjct: 59 PSIFD-NAGDAAVDEWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIG 117
Query: 180 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239
+W A P +P+V G + LDNA WA + G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 240 W--GDSNVADTVAVIDFLAARYANRPSLA-AIELINEPLAP-GVALDTLKSYYKAGYDAV 295
W GD+ V+ TV LA RY + + AIE +NEP P GV+ L+ YY D V
Sbjct: 176 WQQGDT-VSQTVDAFRALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVV 234
Query: 296 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVN 355
R+ V +S+ G + F +G VV+D H+Y +F N L++ ++
Sbjct: 235 RQIDPGTSVFLSD--GFLSTESWNGFKTG-EDVVMDTHHYEMFDNYLISLDIDGHV---- 287
Query: 356 NQRASDLGAVTTSNGPLTFVGEW-----------------------------------TC 380
+ A D G + VGEW T
Sbjct: 288 -KSACDFGKQIEGSDKPVVVGEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTT 346
Query: 381 EWNVKDASKQ---DYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 431
+ +V D S Q D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 347 QGSVADLSDQERTDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|P29717|EXG_CANAL Glucan 1,3-beta-glucosidase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=XOG1 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 161/340 (47%), Gaps = 50/340 (14%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 254 FLAARYANRP---SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310
+ +Y + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 311 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN------------- 356
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 327
Query: 357 ------------------------QRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDY 392
+ A D S PL + +W+ D K D
Sbjct: 328 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWS------DEHKTDT 381
Query: 393 QRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 431
+R+ AQLD + T GW +W+ K E A WS + + NG
Sbjct: 382 RRYIEAQLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNG 420
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A1D4Q5|EXGA_NEOFI Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 172/349 (49%), Gaps = 44/349 (12%)
Query: 120 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 179
PS+F N E+ +T G D+A VL HW ++IT DF ++ G+N VRIP+G
Sbjct: 59 PSIFD-NAGDAAVDEWTLTATLGQDQAKAVLSQHWSTFITQGDFHRIAQAGMNHVRIPIG 117
Query: 180 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239
+W A P +P+V G + LDNA WA G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWARDAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 240 WGDSN-VADTVAVIDFLAARYANRPSL-AAIELINEPLAPG-VALDTLKSYYKAGYDAVR 296
W N V+ TV LA RY + + AAIE +NEP PG V+ L+ YY D VR
Sbjct: 176 WQQGNTVSQTVDAFRALAERYLPQSDVVAAIEALNEPNIPGGVSEAGLRDYYDQIADVVR 235
Query: 297 KYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI----D 352
+ V +S+ G F +G VV+D H+Y +F N L++ ++ D
Sbjct: 236 QINPDTSVFLSD--GFLSTASWNGFKTG-EDVVMDTHHYEMFDNYLISLDIHGHVKSACD 292
Query: 353 YVNNQRASDL--------GAVTTS----NG---PLTFVGEWT-------C----EWNVKD 386
+ + SD GAVT NG P + GE+ C + +V D
Sbjct: 293 FGKQIKGSDKPVVVGEWSGAVTDCTKYLNGKGVPTRYQGEYANNPKYGDCGDKTQGSVAD 352
Query: 387 ASKQ---DYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 431
S Q D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 353 LSDQERADTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q96V64|EXG_BLUGR Glucan 1,3-beta-glucosidase OS=Blumeria graminis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 163/348 (46%), Gaps = 61/348 (17%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY T G D+A L +HW ++IT+EDF ++S G+N VRIP+G+W A P P+V
Sbjct: 69 EYSYTAALGKDEAFTRLNNHWATWITEEDFAEIASMGLNHVRIPIGYW-ALVAIPNDPYV 127
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW--GDSNVADTVAV 251
G +D A DWA K G+KV++DLH APGSQNG ++S R G W GD NV +T+
Sbjct: 128 QGQLSYVDRAIDWARKNGLKVMLDLHGAPGSQNGFDNSG-RTGTIAWQSGD-NVPNTLRA 185
Query: 252 IDFLAARYANRPSLA-AIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310
I LA RYA + + AIEL+NEP G L +K +Y G+ VR TA I L
Sbjct: 186 IQALAERYAPQTDVVTAIELLNEPANWGNDLSQIKKFYYDGWGNVRTQGQTAVTIHDAFL 245
Query: 311 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGL----NVQQNIDYVNNQRASDLGAVT 366
P ++ +G++ V++D H Y +FS N + +VQ ++ + +D
Sbjct: 246 DPRSWNGFMNSEAGVNNVILDTHIYQVFSQNEVAMKPCAHVQTACSSIDKIKPTD----- 300
Query: 367 TSNGPLTFVGEWT------CEW----------------------------------NVKD 386
T VGEWT +W ++
Sbjct: 301 ----KWTIVGEWTGAQTDCAKWLNGLGKGARYDGTLPGHSEGYYGSCDKKYEGTVDSMLP 356
Query: 387 ASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 433
K + Q F AQLD Y T GW +W K E A W + + G I
Sbjct: 357 VDKTNLQYFVEAQLDAYESHT-GWFFWTWKTESAPEWHFQNLTRAGLI 403
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Blumeria graminis (taxid: 34373) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A1CRV0|EXGA_ASPCL Probable glucan 1,3-beta-glucosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=exgA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 193/411 (46%), Gaps = 55/411 (13%)
Query: 63 LVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS----SSWDDS 118
L +S TA + + V + SR+R+ + + Q SE + G W
Sbjct: 2 LSRLSQTALVALSLMTVLTEAVPSRMRIQTRDSVNYQ--SEIVRGVNLGGWLVLEPW--I 57
Query: 119 DPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPV 178
PS+F+ N E+ + G DKA +L HW S+IT +DF ++ G+N VRIPV
Sbjct: 58 TPSIFE-NGGGAAVDEWTLAEVLGKDKARAILSQHWSSFITQDDFNQIAQAGMNHVRIPV 116
Query: 179 GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238
G+W + P +P+V G + LDNA WA G+KV++DLH APGSQNG ++S R G
Sbjct: 117 GYWAVS--APDEPYVDGQLEFLDNAISWARAAGLKVMIDLHGAPGSQNGFDNSG-RKGPI 173
Query: 239 EW--GDSNVADTVAVIDFLAARYANRPSLA-AIELINEPLAPG-VALDTLKSYYKAGYDA 294
W GD+ VA TV LA RY + AIE +NEP PG V LK YY +
Sbjct: 174 AWQQGDT-VARTVDAFKALAERYLPESDVVTAIEAVNEPNIPGGVNEGQLKEYYNQVLEV 232
Query: 295 VRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI--- 351
V A V +S+ G +A+G VV+D H+Y++F N L++ ++
Sbjct: 233 VHSINPDAGVFLSD--GFLATASWNGYANG-ENVVMDTHHYHMFDNTLISLDINAHVRAA 289
Query: 352 -DYVNNQRASD--------LGAVTTS----NG---PLTFVGEWT-------C-------E 381
++ N + SD GA+T NG P + G+W C
Sbjct: 290 CEFGNQIKGSDKPVVVGEWTGALTDCTKHLNGKDIPTRYEGQWANSPRYGDCGNKRQGSS 349
Query: 382 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 431
+ + + D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 350 SGLSEQERSDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 399
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 436 | ||||||
| 359497371 | 529 | PREDICTED: probable glucan 1,3-beta-gluc | 0.997 | 0.822 | 0.759 | 0.0 | |
| 296086866 | 537 | unnamed protein product [Vitis vinifera] | 0.995 | 0.808 | 0.756 | 0.0 | |
| 147795863 | 610 | hypothetical protein VITISV_000586 [Viti | 0.981 | 0.701 | 0.740 | 0.0 | |
| 224093776 | 455 | predicted protein [Populus trichocarpa] | 0.986 | 0.945 | 0.732 | 0.0 | |
| 296086868 | 486 | unnamed protein product [Vitis vinifera] | 0.951 | 0.853 | 0.764 | 0.0 | |
| 224081170 | 481 | predicted protein [Populus trichocarpa] | 0.986 | 0.893 | 0.705 | 0.0 | |
| 356511109 | 503 | PREDICTED: probable glucan 1,3-beta-gluc | 0.990 | 0.858 | 0.679 | 1e-178 | |
| 357455947 | 497 | Glucan 1,3-beta-glucosidase [Medicago tr | 0.986 | 0.865 | 0.685 | 1e-175 | |
| 357455945 | 491 | Glucan 1,3-beta-glucosidase [Medicago tr | 0.986 | 0.875 | 0.668 | 1e-174 | |
| 356525499 | 502 | PREDICTED: probable glucan 1,3-beta-gluc | 0.990 | 0.860 | 0.675 | 1e-174 |
| >gi|359497371|ref|XP_003635494.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Vitis vinifera] gi|296080899|emb|CBI18831.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/436 (75%), Positives = 381/436 (87%), Gaps = 1/436 (0%)
Query: 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 60
MSTK QKY++AE+GGGT VVANRTS+SGWETFRLWR+NE+ +N RV NKQF GLENQG+G
Sbjct: 72 MSTKLQKYLSAENGGGTDVVANRTSSSGWETFRLWRINESTFNLRVFNKQFFGLENQGKG 131
Query: 61 NGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDP 120
N +VAV N+ G SETFQIVRK+ D +RVR+ ASNG+F+QA +TADYG S WDD++P
Sbjct: 132 NKVVAVLNSPGNSETFQIVRKNDDRNRVRIKASNGLFLQA-KPGLVTADYGGSGWDDNNP 190
Query: 121 SVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 180
SVF + IV TL+GEYQITNG+GPD+APQV+QDHW++YIT+EDF+FLSSNG+NAVRIPVGW
Sbjct: 191 SVFHMKIVRTLQGEYQITNGYGPDRAPQVMQDHWNAYITNEDFRFLSSNGLNAVRIPVGW 250
Query: 181 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW 240
WIA+DPTPPKPFVGGS K LDNAF WA+ G+K+IVDLHA GSQNGN+HS TRDGFQEW
Sbjct: 251 WIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKIIVDLHAVQGSQNGNDHSGTRDGFQEW 310
Query: 241 GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS 300
GDSN+ DTVAVIDFLAARYAN PSLAAIEL+NEPLAPGV L+ LK YYKAGYDAVRKYTS
Sbjct: 311 GDSNIQDTVAVIDFLAARYANNPSLAAIELMNEPLAPGVTLNDLKKYYKAGYDAVRKYTS 370
Query: 301 TAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRAS 360
AYVI+SNRLGPAD KELL FA L+RVVIDVHYY+LFS+ FN +NVQQNID++ NQRAS
Sbjct: 371 NAYVILSNRLGPADSKELLDFARSLNRVVIDVHYYSLFSDMFNNMNVQQNIDFIYNQRAS 430
Query: 361 DLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEAN 420
DL AVTTSNGPL+FVGEWT EW A K+DYQRFA AQ+DVYGRATFGWAYWA++C N
Sbjct: 431 DLSAVTTSNGPLSFVGEWTAEWAKSGAPKEDYQRFAKAQIDVYGRATFGWAYWAYRCAQN 490
Query: 421 HWSLKWMIENGYIKLV 436
HWSL+WMIENGYI L+
Sbjct: 491 HWSLEWMIENGYINLL 506
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086866|emb|CBI33033.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/435 (75%), Positives = 381/435 (87%), Gaps = 1/435 (0%)
Query: 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 60
MSTK QKY+AAE+GGGT VVANRTS SGWETFRLWR+N++ +N RV NKQF GLENQG+G
Sbjct: 72 MSTKLQKYLAAENGGGTDVVANRTSPSGWETFRLWRINKSTFNLRVFNKQFFGLENQGKG 131
Query: 61 NGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDP 120
N +V+V N+ G SETFQIVRK+ D +RVR+ ASNG+F+QA +TADYG S WDD++P
Sbjct: 132 NKVVSVLNSPGNSETFQIVRKNDDQNRVRIKASNGLFLQA-KPGLVTADYGGSGWDDNNP 190
Query: 121 SVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 180
SVF++ IV TL+GEYQITNG+GPD+APQV+QDHW++YIT+EDF+FLSSNG+NAVRIPVGW
Sbjct: 191 SVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWNAYITNEDFRFLSSNGLNAVRIPVGW 250
Query: 181 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW 240
WIA+DPTPPKPFVGGS K LDNAF WA+ G+K+IVDLHA GSQNGN+HS TRDGFQEW
Sbjct: 251 WIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKIIVDLHAVQGSQNGNDHSGTRDGFQEW 310
Query: 241 GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS 300
GDSN+ DTVAVIDFLAARYAN PSLA+IEL+NEPLAPGV L+ LK YYKAGYDAVRKYTS
Sbjct: 311 GDSNIQDTVAVIDFLAARYANNPSLASIELMNEPLAPGVTLNDLKKYYKAGYDAVRKYTS 370
Query: 301 TAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRAS 360
AYVI+SNRLGPAD KELL FA GL+RVVIDVHYY+LFS+ FN +NVQQNID++ +QRAS
Sbjct: 371 NAYVILSNRLGPADSKELLDFARGLNRVVIDVHYYSLFSDMFNNMNVQQNIDFIYSQRAS 430
Query: 361 DLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEAN 420
DL AVTTSNGPL+FVGEWT EW ASK+DYQRFA AQ+DVY RATFGWAYWA++C N
Sbjct: 431 DLSAVTTSNGPLSFVGEWTAEWAKSGASKKDYQRFAKAQIDVYRRATFGWAYWAYRCAQN 490
Query: 421 HWSLKWMIENGYIKL 435
HWSLKWMIENG+I L
Sbjct: 491 HWSLKWMIENGHINL 505
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147795863|emb|CAN74231.1| hypothetical protein VITISV_000586 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/435 (74%), Positives = 373/435 (85%), Gaps = 7/435 (1%)
Query: 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 60
MSTK QKY+AAE+GGGT VVANRTS SGWETFRLWR+N++ +N RV NKQF GLENQG+G
Sbjct: 180 MSTKLQKYLAAENGGGTDVVANRTSPSGWETFRLWRINKSTFNLRVFNKQFFGLENQGKG 239
Query: 61 NGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDP 120
N +V+V N+ G SETFQIVRK+ D +RVR+ ASNG+F+QA +TADYG S WD ++P
Sbjct: 240 NKVVSVLNSPGNSETFQIVRKNDDQNRVRIKASNGLFLQA-KPGLVTADYGGSGWDXNNP 298
Query: 121 SVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 180
SVF++ IV TL+GEYQITNG+GPD+APQV+QDHW++YI +EDF+FLSSNG+NAVRIPVGW
Sbjct: 299 SVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWNAYIXNEDFRFLSSNGLNAVRIPVGW 358
Query: 181 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW 240
WIA+DPTPPKPFVGGS K LDNAF WA+ G+K+IVDLHA GSQNGN+HS TRDGFQEW
Sbjct: 359 WIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKIIVDLHAVQGSQNGNDHSGTRDGFQEW 418
Query: 241 GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS 300
GDSN+ DTVAVIDFLAA SLA IEL+NEPLAPGV L+ LK YYKAGYDAVRKYTS
Sbjct: 419 GDSNIQDTVAVIDFLAA------SLAXIELMNEPLAPGVTLNDLKKYYKAGYDAVRKYTS 472
Query: 301 TAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRAS 360
AYVI+SNRLGPAD KELL FA GL+RVVIDVHYY+LFS+ FN +NVQQNID++ +QRAS
Sbjct: 473 NAYVILSNRLGPADSKELLDFARGLNRVVIDVHYYSLFSDMFNNMNVQQNIDFIYSQRAS 532
Query: 361 DLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEAN 420
DL AVTTSNGPL+FVGEWT EW ASK+DYQRFA AQ+DVY RATFGWAYWA++C N
Sbjct: 533 DLSAVTTSNGPLSFVGEWTAEWAKSGASKKDYQRFAKAQIDVYRRATFGWAYWAYRCAQN 592
Query: 421 HWSLKWMIENGYIKL 435
HWSLKWMIENG+I L
Sbjct: 593 HWSLKWMIENGHINL 607
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224093776|ref|XP_002309987.1| predicted protein [Populus trichocarpa] gi|222852890|gb|EEE90437.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/438 (73%), Positives = 379/438 (86%), Gaps = 8/438 (1%)
Query: 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 60
+STK QKY+++E+GGGT++VANR SASGWETFRLWR+NET++NFRV NKQF+GLE+QG
Sbjct: 23 LSTKLQKYLSSENGGGTVLVANRPSASGWETFRLWRINETYFNFRVFNKQFVGLEDQG-- 80
Query: 61 NGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDP 120
+ + AVS+T G S+TFQI+R + D +RVRL ASNG FIQA SET +TADY S W+DSDP
Sbjct: 81 DKVTAVSDTVGNSQTFQIIRNNDDRNRVRLQASNGQFIQASSETLVTADYVGSGWEDSDP 140
Query: 121 SVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPV 178
SVFK+ IV+ + RGEYQ+TNG+GPD+APQVLQDHW+SYIT+EDF+F+S N +NAVRIPV
Sbjct: 141 SVFKMTIVNIYSFRGEYQLTNGYGPDRAPQVLQDHWNSYITEEDFRFMSENSLNAVRIPV 200
Query: 179 GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238
GWWIA+DPTPPKPFVGGS K LDNAF WA+KYG+KVIVDLHA SQNGN+HSATRDG+Q
Sbjct: 201 GWWIASDPTPPKPFVGGSLKALDNAFTWAQKYGMKVIVDLHAVQASQNGNDHSATRDGYQ 260
Query: 239 EWGDSNVADTVAVIDFLA-ARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK 297
EWG+SN+ +TVAVIDFLA +RYA++PSLAAIEL+NEP+APGV LDTL YY+AGYDAVRK
Sbjct: 261 EWGESNIQETVAVIDFLAESRYADKPSLAAIELMNEPMAPGVNLDTLIKYYQAGYDAVRK 320
Query: 298 YTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQ 357
++ AYVI+SNRLGPAD KELLSFASGL RVVIDVHYYNLFS++FN +N QQNIDY+ NQ
Sbjct: 321 HSENAYVILSNRLGPADSKELLSFASGLKRVVIDVHYYNLFSDSFNNMNPQQNIDYIYNQ 380
Query: 358 RASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417
RAS L VTT+NGPL EWT +W V+ AS QDYQ FA AQLDVYGRATFGWAYWA+KC
Sbjct: 381 RASALTTVTTTNGPLR---EWTGDWAVQGASMQDYQNFAKAQLDVYGRATFGWAYWAYKC 437
Query: 418 EANHWSLKWMIENGYIKL 435
+HWSLKWMIEN YIKL
Sbjct: 438 AGDHWSLKWMIENNYIKL 455
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086868|emb|CBI33035.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/416 (76%), Positives = 366/416 (87%), Gaps = 1/416 (0%)
Query: 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 60
MSTK QKY++AE+GGGT VVANRTS SGWETFRLWR+NE+ +N RV NKQF GLENQG+G
Sbjct: 72 MSTKLQKYLSAENGGGTDVVANRTSPSGWETFRLWRINESTFNLRVFNKQFFGLENQGKG 131
Query: 61 NGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDP 120
N +VAV N+ G SETFQIVRK+ D +RVR+ ASNG+F+QA +TADYG S WDD++P
Sbjct: 132 NKVVAVLNSPGNSETFQIVRKNDDRNRVRIKASNGLFLQA-KPGLVTADYGGSGWDDNNP 190
Query: 121 SVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 180
SVF++ IV TL+GEYQITNG+GPD+APQV+QDHW++YIT+EDF+FLSSNG+NAVRIPVGW
Sbjct: 191 SVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWNAYITNEDFRFLSSNGLNAVRIPVGW 250
Query: 181 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW 240
WIA+DPTPPKPFVGGS K LDNAF WA+ G+K+IVDLHA GSQNGN+HS TRDGFQEW
Sbjct: 251 WIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKIIVDLHAVQGSQNGNDHSGTRDGFQEW 310
Query: 241 GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS 300
GDSN+ DTVAVIDFLAARYAN PSLAAIEL+NEPLAPGV L+ LK YYKAGYDAVRKYTS
Sbjct: 311 GDSNIQDTVAVIDFLAARYANNPSLAAIELMNEPLAPGVTLNDLKKYYKAGYDAVRKYTS 370
Query: 301 TAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRAS 360
AYVI+SNRLGPAD KELL FA GL+RVVIDVHYY+LFS+ FN +NVQQNID++ NQRAS
Sbjct: 371 NAYVILSNRLGPADSKELLDFARGLNRVVIDVHYYSLFSDMFNNMNVQQNIDFIYNQRAS 430
Query: 361 DLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 416
DL AVTTSNGPL+FVGEWT EW ASK+DYQRFA AQ+DVYGRATFGWAYWA++
Sbjct: 431 DLSAVTTSNGPLSFVGEWTAEWAKSGASKEDYQRFAKAQIDVYGRATFGWAYWAYR 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224081170|ref|XP_002306319.1| predicted protein [Populus trichocarpa] gi|222855768|gb|EEE93315.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/448 (70%), Positives = 368/448 (82%), Gaps = 18/448 (4%)
Query: 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 60
ST+ QKY+ +E+GGGTI+VANR SAS WETFRLWR+NET++NFRV NKQF+GLE+QG
Sbjct: 37 FSTRLQKYLCSENGGGTILVANRPSASDWETFRLWRINETYFNFRVFNKQFVGLEDQG-- 94
Query: 61 NGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDP 120
N + A S+TAG ETFQI+RK+ D S VRL ASNG F+QAISET +TADY S WDD DP
Sbjct: 95 NKVTAFSDTAGNRETFQIIRKNDDRSIVRLQASNGQFLQAISETLVTADYVGSGWDDGDP 154
Query: 121 SVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPV 178
SVFK+ IV+ +RGEYQ+TNG+G D+APQVLQDHW+SYITDEDF+F+S+NG+NAVRIPV
Sbjct: 155 SVFKMTIVNPNAIRGEYQLTNGYGTDRAPQVLQDHWNSYITDEDFRFMSANGLNAVRIPV 214
Query: 179 GWWIANDPTPPKPFVGGSSKVLDNAFDWAE-------------KYGVKVIVDLHAAPGSQ 225
GWWIA DP PPKPFV GS K LDNAF WA+ +YG+KVIVDLHA GSQ
Sbjct: 215 GWWIACDP-PPKPFVSGSLKALDNAFTWAQCYKYSDDGLRIYMEYGMKVIVDLHAIQGSQ 273
Query: 226 NGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLK 285
NGN HS TRDG+QEWGDSN+ DTVAVIDFLA RYAN SLAAIEL+NEP+APG++LDTLK
Sbjct: 274 NGNGHSGTRDGYQEWGDSNIQDTVAVIDFLAERYANNTSLAAIELMNEPMAPGISLDTLK 333
Query: 286 SYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGL 345
YY+AGYDAVRKYT AYVI+SNRLG AD KELLSFAS L V IDVHYYNLFS++F+ +
Sbjct: 334 KYYQAGYDAVRKYTQNAYVILSNRLGNADAKELLSFASSLHCVAIDVHYYNLFSDSFSNM 393
Query: 346 NVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR 405
N QQNID+++NQR+SDL VTT+NGP FVGEWT EW V AS +DYQ FA AQ++VYGR
Sbjct: 394 NAQQNIDFIHNQRSSDLDTVTTANGPSIFVGEWTGEWEVNGASMEDYQNFAKAQIEVYGR 453
Query: 406 ATFGWAYWAHKCEANHWSLKWMIENGYI 433
A FGWAYWA+KC AN+WSLKWMIEN YI
Sbjct: 454 AQFGWAYWAYKCAANYWSLKWMIENNYI 481
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356511109|ref|XP_003524272.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 297/437 (67%), Positives = 362/437 (82%), Gaps = 5/437 (1%)
Query: 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 60
MSTK QKY+ AE GGG++VVANRT ASGWETFRLWR+NE+ +NFRV+NKQFI L N+ G
Sbjct: 70 MSTKLQKYLCAEHGGGSVVVANRTKASGWETFRLWRINESTFNFRVSNKQFIRLTNRDGG 129
Query: 61 NGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDP 120
+ LVA S++ ETF+I+R D D +RVR+ A NG F+QAISET + A+Y SSWDDSDP
Sbjct: 130 SNLVADSDSPSDLETFEILRNDDDPNRVRIRAPNGQFLQAISETVVLANYEGSSWDDSDP 189
Query: 121 SVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPV 178
S+FK+N++S +RGEYQITNG+ PDKA ++++DHW++YI ++DFKF+S NG+NAVRIPV
Sbjct: 190 SIFKMNVLSGSIIRGEYQITNGYSPDKATKIMRDHWNTYIIEDDFKFMSENGLNAVRIPV 249
Query: 179 GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238
GWW DPTPPKPFVGGS +VLDNAF WAEKYG+KVIVDLHAAPGSQNG HSA+RDG+
Sbjct: 250 GWWTTQDPTPPKPFVGGSLEVLDNAFTWAEKYGIKVIVDLHAAPGSQNGRPHSASRDGYL 309
Query: 239 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKY 298
EWGDS ++DTVA IDFLA RY+NR L AIEL+NEP GV L++LKSYY+AGYDAVRK+
Sbjct: 310 EWGDSYISDTVATIDFLAERYSNRSGLVAIELMNEP--QGVNLESLKSYYQAGYDAVRKH 367
Query: 299 TSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQR 358
TS+AYVIMSN L D K LLSFA SRVVIDVHYYNLFS+ F+ +NVQQNID++ NQR
Sbjct: 368 TSSAYVIMSNPLD-RDSKVLLSFAGAFSRVVIDVHYYNLFSDRFSNMNVQQNIDFIKNQR 426
Query: 359 ASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418
ASDL ++TTSNGPL FVGEW+ +W V+ ASK+D+Q+F Q+DVY RA FGWAYWA+ C+
Sbjct: 427 ASDLSSLTTSNGPLIFVGEWSSDWKVQSASKKDHQKFTQVQVDVYSRAKFGWAYWAYICD 486
Query: 419 ANHWSLKWMIENGYIKL 435
+N WS+KWMIEN YIKL
Sbjct: 487 SNFWSIKWMIENNYIKL 503
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455947|ref|XP_003598254.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|355487302|gb|AES68505.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 620 bits (1598), Expect = e-175, Method: Compositional matrix adjust.
Identities = 299/436 (68%), Positives = 357/436 (81%), Gaps = 6/436 (1%)
Query: 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 60
MSTKFQKY+AA++GGG +VANR SASGWETF LWRVN+T++NFRV NKQF+G+ NQG
Sbjct: 67 MSTKFQKYLAADNGGGAGIVANRDSASGWETFPLWRVNDTYFNFRVFNKQFMGINNQGD- 125
Query: 61 NGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS-SSWDDSD 119
N +VAVSN+ ETFQI+R GD ++R+ ASNG++ Q SET +TADYG +SW++SD
Sbjct: 126 NKIVAVSNSPSNQETFQIIRNSGDPLKIRIKASNGLYWQVRSETLVTADYGQGTSWEESD 185
Query: 120 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 179
PSVF++ IV TL GEYQ+TNG+GPDKAPQVL+DHW+SYIT++DF F+S NG+NAVRIPVG
Sbjct: 186 PSVFRMKIVRTLEGEYQLTNGYGPDKAPQVLRDHWNSYITEDDFTFMSQNGLNAVRIPVG 245
Query: 180 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239
WWIA DP PPKPFVGGS LDNAF WA+ +G+KVIVDLHA GSQNGN+HS TRDGF E
Sbjct: 246 WWIAQDPNPPKPFVGGSLAALDNAFTWAQIHGMKVIVDLHAVEGSQNGNDHSGTRDGFIE 305
Query: 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYT 299
WG+S + TV+VIDFLA RY NRPSL IEL+NEP GV LD+LK YYK YDAVRKY
Sbjct: 306 WGESYIPQTVSVIDFLAKRYGNRPSLGGIELMNEP--QGVNLDSLKKYYKEAYDAVRKYN 363
Query: 300 STAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRA 359
AYVIMSN L AD K LLSF +G ++VV+DVHYYNL+S+ F +NVQQNIDY+NN+RA
Sbjct: 364 PNAYVIMSNPLD-ADSKVLLSFVTGFNKVVLDVHYYNLYSDKFTNMNVQQNIDYINNERA 422
Query: 360 SDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 419
SDL V+++N L+FVGEWT E+ V+ AS QDYQR+ AQLDVY RATFGWAYWA+KC+
Sbjct: 423 SDLSGVSSTNA-LSFVGEWTDEFLVQGASMQDYQRYGQAQLDVYSRATFGWAYWAYKCQY 481
Query: 420 NHWSLKWMIENGYIKL 435
NHWSLKWMIENGYIKL
Sbjct: 482 NHWSLKWMIENGYIKL 497
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455945|ref|XP_003598253.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|355487301|gb|AES68504.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/434 (66%), Positives = 355/434 (81%), Gaps = 4/434 (0%)
Query: 2 STKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGN 61
STKFQKY+ AE GGGT +VANR S SGWETF+LWRVN++ +NFRV NK+F+GL N G GN
Sbjct: 44 STKFQKYLCAEDGGGTAIVANRGSPSGWETFKLWRVNDSSFNFRVFNKKFVGLNNIGGGN 103
Query: 62 GLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDPS 121
+V+ S++ G ETFQI+R + D ++R+ ASNG+F+QA SET +TA+Y ++W++SDPS
Sbjct: 104 TIVSFSDSPGNRETFQIIRNNDDPLKIRIKASNGLFLQAQSETLVTANYQGTNWEESDPS 163
Query: 122 VFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWW 181
VFK+ IV TL GEYQ+TNG+GPD+APQVL++HW+SYIT++DF+F+S NG++AVRIPVGWW
Sbjct: 164 VFKMTIVRTLEGEYQLTNGYGPDRAPQVLREHWNSYITEDDFRFMSQNGLDAVRIPVGWW 223
Query: 182 IANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG 241
IA DP PPKPFVGGS LDNAF WA+ + +KVIVDLHA GSQNGNEHS TRDG+ EWG
Sbjct: 224 IAYDPNPPKPFVGGSLAALDNAFTWAQNHEMKVIVDLHAVEGSQNGNEHSGTRDGYTEWG 283
Query: 242 DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 301
DS + TVAVIDFLA RY N+PSL IEL+NEP GV LD+LK YYKA YDAVRKY
Sbjct: 284 DSYIPQTVAVIDFLAQRYGNKPSLGGIELMNEP--QGVNLDSLKKYYKAAYDAVRKYNPE 341
Query: 302 AYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASD 361
AYVIMSN L D K LLSF SG ++VV+DVHYYN+F FNG+NVQQNID++ N+RASD
Sbjct: 342 AYVIMSNPLD-GDSKALLSFVSGFNKVVLDVHYYNMFWEKFNGMNVQQNIDFIRNERASD 400
Query: 362 LGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANH 421
L V+++N LTF+GEWT EW +++ASKQD+Q FA AQLDVY RATFGWAYW++KC+ N
Sbjct: 401 LAGVSSTNA-LTFIGEWTGEWTIQNASKQDFQNFAQAQLDVYSRATFGWAYWSYKCQFNR 459
Query: 422 WSLKWMIENGYIKL 435
WSLKWMIENGYIKL
Sbjct: 460 WSLKWMIENGYIKL 473
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525499|ref|XP_003531362.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/437 (67%), Positives = 355/437 (81%), Gaps = 5/437 (1%)
Query: 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQG 60
MSTK QKY+ AE GGG++VVANRT A GWETFRLWRVNE+ +NFRV++KQFI L NQ G
Sbjct: 69 MSTKLQKYLCAEHGGGSVVVANRTKALGWETFRLWRVNESTFNFRVSSKQFIRLTNQNGG 128
Query: 61 NGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDP 120
+ LVA S++ ETF+I+R D D + VR+ A NG F+QAISE + A+Y SSWDDSDP
Sbjct: 129 SNLVADSDSPSDMETFEILRSDDDPNMVRIRAPNGQFLQAISENVVLANYEGSSWDDSDP 188
Query: 121 SVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPV 178
SVFK+N++S +RGEYQITNG+GPDKA ++++DHW++YIT++DFKF+S NG+NAVRIPV
Sbjct: 189 SVFKMNVLSGSIIRGEYQITNGYGPDKASKIMRDHWNTYITEDDFKFMSENGLNAVRIPV 248
Query: 179 GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238
GWW DPTPPKPFVGGS +VLDNAF WAEKYG+KVIVDLHAAPGSQNG HSA+RDG+
Sbjct: 249 GWWTTLDPTPPKPFVGGSLEVLDNAFTWAEKYGIKVIVDLHAAPGSQNGRPHSASRDGYL 308
Query: 239 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKY 298
EW DS ++DTVA IDFLA RYAN L AIEL+NEP GV L++LKSYY+AGYDAVRK+
Sbjct: 309 EWDDSYISDTVAAIDFLAERYANSSGLVAIELMNEP--QGVNLESLKSYYQAGYDAVRKH 366
Query: 299 TSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQR 358
TS+AYVIMSN L D K LLSFA S VVIDVHYYNLFS+ F+ +NVQQNID++ QR
Sbjct: 367 TSSAYVIMSNPLD-RDSKVLLSFAGAFSGVVIDVHYYNLFSDRFSNMNVQQNIDFIKKQR 425
Query: 359 ASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418
SDL ++TTSNGPL FVGEW+ +W V+ ASK D Q+F Q+DVY RA FGWAYWA+KC+
Sbjct: 426 VSDLSSLTTSNGPLIFVGEWSSDWKVQSASKIDQQKFTQVQVDVYSRAKFGWAYWAYKCD 485
Query: 419 ANHWSLKWMIENGYIKL 435
+N WS+KWMIEN YIKL
Sbjct: 486 SNFWSIKWMIENNYIKL 502
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 436 | ||||||
| ASPGD|ASPL0000016384 | 405 | exgC [Emericella nidulans (tax | 0.536 | 0.577 | 0.376 | 2e-43 | |
| CGD|CAL0006153 | 438 | XOG1 [Candida albicans (taxid: | 0.509 | 0.506 | 0.361 | 2.5e-43 | |
| UNIPROTKB|P29717 | 438 | XOG1 "Glucan 1,3-beta-glucosid | 0.509 | 0.506 | 0.361 | 2.5e-43 | |
| SGD|S000005716 | 445 | SPR1 "Sporulation-specific exo | 0.470 | 0.460 | 0.352 | 5.7e-38 | |
| POMBASE|SPBC1105.05 | 407 | exg1 "glucan 1,6-beta-glucosid | 0.548 | 0.587 | 0.312 | 4.4e-34 | |
| CGD|CAL0006050 | 479 | EXG2 [Candida albicans (taxid: | 0.369 | 0.336 | 0.339 | 9.8e-31 | |
| UNIPROTKB|Q5AIA1 | 479 | EXG2 "Putative uncharacterized | 0.369 | 0.336 | 0.339 | 9.8e-31 | |
| SGD|S000004291 | 448 | EXG1 "Major exo-1,3-beta-gluca | 0.548 | 0.533 | 0.333 | 1.1e-30 | |
| CGD|CAL0006247 | 525 | SPR1 [Candida albicans (taxid: | 0.538 | 0.447 | 0.276 | 2e-25 | |
| UNIPROTKB|Q59Z61 | 525 | SPR1 "Putative uncharacterized | 0.538 | 0.447 | 0.276 | 2e-25 |
| ASPGD|ASPL0000016384 exgC [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 402 (146.6 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 95/252 (37%), Positives = 146/252 (57%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY +T G ++A L +HW+++IT+EDF ++ G+N VRIP+G+W A P +P+V
Sbjct: 59 EYTLTEVLGVEEAAARLSEHWNTFITEEDFALIAEAGLNYVRIPIGYWAAA-PLDGEPYV 117
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD--GFQEWGDSNVADTVAV 251
G + LDNA WA + +KVIVDLH APGSQNG ++S R G+Q+ GD+ V T+
Sbjct: 118 SGQLEHLDNAVAWARAHNLKVIVDLHGAPGSQNGFDNSGRRGPIGWQQ-GDT-VEQTILA 175
Query: 252 IDFLAARY-ANRPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 309
+ LA RY A+ ++ IE +NEP PG + D LK YY+ VRK + A +++ +
Sbjct: 176 FETLAQRYLADDDTVTMIEALNEPHVPGGINQDQLKDYYEETLARVRKNSPEATLLLHD- 234
Query: 310 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGA--VTT 367
G + F +G V++D H+Y +F N +++++ID A LG +
Sbjct: 235 -GFVQTEGWNGFMTG-ENVMMDTHHYEVFEGGQNAWSIEKHID-----AACQLGRQHLQA 287
Query: 368 SNGPLTFVGEWT 379
++ P+ VGEWT
Sbjct: 288 ADKPV-IVGEWT 298
|
|
| CGD|CAL0006153 XOG1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 82/227 (36%), Positives = 127/227 (55%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 254 FLAARYA-NRPS--LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310
+ +Y N S + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 311 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN 356
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACN 314
|
|
| UNIPROTKB|P29717 XOG1 "Glucan 1,3-beta-glucosidase" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 82/227 (36%), Positives = 127/227 (55%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 254 FLAARYA-NRPS--LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310
+ +Y N S + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 311 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN 356
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACN 314
|
|
| SGD|S000005716 SPR1 "Sporulation-specific exo-1,3-beta-glucanase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 346 (126.9 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 75/213 (35%), Positives = 119/213 (55%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY G +KA + L HW ++ +EDF ++S G N VRIP+G+W A P+V
Sbjct: 91 EYHFCEKLGYEKAKERLYSHWSTFYKEEDFAKIASQGFNLVRIPIGYW-AFTTLSHDPYV 149
Query: 194 GGSSKV-LDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 252
+ LD A DWA KYG+KV +DLH A GSQNG ++S RD ++ D N++ T+ +
Sbjct: 150 TAEQEYFLDRAIDWARKYGLKVWIDLHGAAGSQNGFDNSGLRDSYKFLEDENLSATMKAL 209
Query: 253 DFLAARYANR---PSLAAIELINEPLAPGVALDTLKSYY-KAGYDAVR-KYTSTAYVIMS 307
++ ++Y+ ++ IEL+NEPL P + ++ LK+ K YD +R K S +++
Sbjct: 210 TYILSKYSTDVYLDTVIGIELLNEPLGPVIDMERLKNLLLKPAYDYLRNKINSNQIIVIH 269
Query: 308 NRLGPADHKE-LLSFASGLSRVVIDVHYYNLFS 339
+ P + + L+ V+ID H+Y +FS
Sbjct: 270 DAFQPYHYWDGFLNDEKNEYGVIIDHHHYQVFS 302
|
|
| POMBASE|SPBC1105.05 exg1 "glucan 1,6-beta-glucosidase Exg1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 321 (118.1 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 78/250 (31%), Positives = 126/250 (50%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
E+ G D+A L H+ S+ T+ DF ++S G+N +RIP+G+W N +P+V
Sbjct: 72 EWGFCEVLGADEAASQLAAHYSSFYTESDFATIASWGVNVLRIPIGYWAFN-VVDGEPYV 130
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN-VADTVAVI 252
G LD A WAE+YG+KV +DLH PGSQNG E+S + G W ++ V T+ +I
Sbjct: 131 QGQEYWLDQALTWAEQYGLKVWIDLHGVPGSQNGFENSG-KTGSIGWQQNDTVTRTLDII 189
Query: 253 DFLAARYANRPSLAA---IELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 309
++A +Y + IE +NEPL G+ +D LK Y Y+ V +S+ I+ +
Sbjct: 190 TYVANKYTQSQYASVVIGIETVNEPLGYGLDMDQLKQYDLDAYNIVNPLSSSVATIIHDA 249
Query: 310 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 369
+ + +V+DVH Y L+ ++ + ++ V +G S+
Sbjct: 250 YVDLSIWDYGVVSPSSYNLVMDVHRYQLYESDECSKTLDDHLSDV-----CSIGDSIASS 304
Query: 370 GPLTFVGEWT 379
+T GEW+
Sbjct: 305 PYITVTGEWS 314
|
|
| CGD|CAL0006050 EXG2 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 9.8e-31, Sum P(3) = 9.8e-31
Identities = 59/174 (33%), Positives = 95/174 (54%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY G +A + L DHW+S + DFK + G+N VRIP+G+W + + P+V
Sbjct: 79 EYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNMVRIPIGYW-SFEKLEGDPYV 137
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD-GFQEWGDSN--VADTVA 250
G+ LD A +W+ +KV++DLH AP +QNG ++S R+ G+ W + V T
Sbjct: 138 SGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGLRNLGYPGWQNKTEYVNHTYK 197
Query: 251 VIDFL-----AARYAN--RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK 297
V+ + +YA+ + ++ IE++NEPL P +D LK +Y Y+ R+
Sbjct: 198 VLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPN--MDKLKEFYIESYNDGRE 249
|
|
| UNIPROTKB|Q5AIA1 EXG2 "Putative uncharacterized protein EXG2" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 9.8e-31, Sum P(3) = 9.8e-31
Identities = 59/174 (33%), Positives = 95/174 (54%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY G +A + L DHW+S + DFK + G+N VRIP+G+W + + P+V
Sbjct: 79 EYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNMVRIPIGYW-SFEKLEGDPYV 137
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD-GFQEWGDSN--VADTVA 250
G+ LD A +W+ +KV++DLH AP +QNG ++S R+ G+ W + V T
Sbjct: 138 SGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGLRNLGYPGWQNKTEYVNHTYK 197
Query: 251 VIDFL-----AARYAN--RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK 297
V+ + +YA+ + ++ IE++NEPL P +D LK +Y Y+ R+
Sbjct: 198 VLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPN--MDKLKEFYIESYNDGRE 249
|
|
| SGD|S000004291 EXG1 "Major exo-1,3-beta-glucanase of the cell wall" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 84/252 (33%), Positives = 133/252 (52%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY G D A LQ HW ++ ++DF ++S G N VRIP+G+W A P+V
Sbjct: 90 EYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYW-AFQTLDDDPYV 148
Query: 194 GG-SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 252
G LD A WA +KV VDLH A GSQNG ++S RD ++ DSN+A T V+
Sbjct: 149 SGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTTNVL 208
Query: 253 DFLAARYANRPSL---AAIELINEPLAPGVALDTLKSYYKA-GYDAVRK-YTSTAYVIMS 307
+++ +Y+ L IELINEPL P + +D +K+ Y A Y+ +R S +I+
Sbjct: 209 NYILKKYSAEEYLDTVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIH 268
Query: 308 NRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 366
+ P ++ + ++ G V ID H+Y +F+++ ++++ID + + A + G
Sbjct: 269 DAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASD----QLERSIDE-HIKVACEWGTGV 323
Query: 367 TSNGPLTFVGEW 378
+ T GE+
Sbjct: 324 LNESHWTVCGEF 335
|
|
| CGD|CAL0006247 SPR1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 69/250 (27%), Positives = 128/250 (51%)
Query: 134 EYQITNGFGP--DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKP 191
EY +T+ D LQ+HWD + + DF+ +S +N +RIP+G+W A + P P
Sbjct: 103 EYTLTSLLRDTMDNGSIYLQNHWDQFYNETDFQQISQLKLNLIRIPIGYW-AFELLPNDP 161
Query: 192 FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW--GDSNVADTV 249
++ G K LD A +WA KY + + + +H PGSQNG ++S W + N+ T
Sbjct: 162 YIQGQEKYLDIAIEWATKYNLFIQIGIHGLPGSQNGFDNSGLYTETPTWLENELNMNLTY 221
Query: 250 AVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 309
++D++ +Y N ++ +I+L+NEPL + + L ++Y + + + A +++ +
Sbjct: 222 RLVDYILNKYGNHTTIHSIQLVNEPLGFLLNKEKLSNFYIYCLEKIIQKNIKAKLVLHDA 281
Query: 310 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 369
+ S+ + ++D H Y +FS LN+QQ++ + +Q G +
Sbjct: 282 FFNIE-----SWKNFPGEFILDHHLYEVFSQWQIDLNLQQHLQSIKHQ-----GESIVKS 331
Query: 370 GPLTFVGEWT 379
G + VGE++
Sbjct: 332 GHRSIVGEFS 341
|
|
| UNIPROTKB|Q59Z61 SPR1 "Putative uncharacterized protein SPR1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 69/250 (27%), Positives = 128/250 (51%)
Query: 134 EYQITNGFGP--DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKP 191
EY +T+ D LQ+HWD + + DF+ +S +N +RIP+G+W A + P P
Sbjct: 103 EYTLTSLLRDTMDNGSIYLQNHWDQFYNETDFQQISQLKLNLIRIPIGYW-AFELLPNDP 161
Query: 192 FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW--GDSNVADTV 249
++ G K LD A +WA KY + + + +H PGSQNG ++S W + N+ T
Sbjct: 162 YIQGQEKYLDIAIEWATKYNLFIQIGIHGLPGSQNGFDNSGLYTETPTWLENELNMNLTY 221
Query: 250 AVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 309
++D++ +Y N ++ +I+L+NEPL + + L ++Y + + + A +++ +
Sbjct: 222 RLVDYILNKYGNHTTIHSIQLVNEPLGFLLNKEKLSNFYIYCLEKIIQKNIKAKLVLHDA 281
Query: 310 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 369
+ S+ + ++D H Y +FS LN+QQ++ + +Q G +
Sbjct: 282 FFNIE-----SWKNFPGEFILDHHLYEVFSQWQIDLNLQQHLQSIKHQ-----GESIVKS 331
Query: 370 GPLTFVGEWT 379
G + VGE++
Sbjct: 332 GHRSIVGEFS 341
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_VII1905 | hypothetical protein (455 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 436 | |||
| COG2730 | 407 | COG2730, BglC, Endoglucanase [Carbohydrate transpo | 1e-31 | |
| pfam00150 | 269 | pfam00150, Cellulase, Cellulase (glycosyl hydrolas | 5e-17 | |
| cd00257 | 119 | cd00257, Fascin, Fascin-like domain; members inclu | 8e-04 |
| >gnl|CDD|225344 COG2730, BglC, Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 1e-31
Identities = 86/354 (24%), Positives = 136/354 (38%), Gaps = 42/354 (11%)
Query: 116 DDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 175
D L G G A +L+ HW ++IT+EDF + S G NAVR
Sbjct: 32 ADGLFKTDPKESPGQLVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVR 91
Query: 176 IPVGWWIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 233
IP+G+W P++ K+LD A +WA+K G+ V++DLH PG NG+EHS
Sbjct: 92 IPIGYWALQATDGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGY 151
Query: 234 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYD 293
+ + + NV T+ + F+A R+ N ++ ELINEP + +T YD
Sbjct: 152 TSDY-KEENENVEATIDIWKFIANRFKNYDTVIGFELINEPNGIVTS-ETWNGGDDEAYD 209
Query: 294 AVRKYTSTAYVIMSNRLGPAD--HKELLSFAS-GLSRVVIDVHYYNLFSNNFNGLNVQQN 350
VR + R+G ++ + G S D Y + ++
Sbjct: 210 VVRNAILSNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTAN--K 267
Query: 351 IDYVNNQRASD--------------------------LGAVTTSNGPLTFVGEWTCEWNV 384
Y + D +G NG T +GE+ +N
Sbjct: 268 HLYAPHVYGDDVLNGGSWTVGGEFDLAETDCAIWLNYVGHGARKNGYPTVIGEFGGNYNA 327
Query: 385 -----KDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEAN-HWSLKWMIENGY 432
+D K + + + QLDV+ T W + + ++ I G
Sbjct: 328 NNPNPQDERKDNVKVYLENQLDVFDT-TTYWINNPWSGGNDTGYDIEDDINLGL 380
|
Length = 407 |
| >gnl|CDD|215751 pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5) | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 5e-17
Identities = 62/270 (22%), Positives = 94/270 (34%), Gaps = 29/270 (10%)
Query: 153 HW--DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKY 210
HW Y T + G N VR+PV W P +D D+A
Sbjct: 16 HWGNPYYTTKAMIDLVKDWGFNVVRLPVSWGGYVPNNPDYLIDENWLNRVDEVVDYAIDN 75
Query: 211 GVKVIVDLHAAPGSQNGNEHSAT-RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIE 269
G+ VI+D H + N + T + F++ +A RY N P++ E
Sbjct: 76 GMYVIIDWHHDTWPGDPNGNIDTAKAFFKKLW-----------TQIATRYGNNPNV-IFE 123
Query: 270 LINEPLAPGVAL--DTLKSYYKAGYDAVRKYTSTAYVIM-SNRLGPADHKELLSFASGLS 326
L+NEP A D +K Y + DA+R +I+ L+ +
Sbjct: 124 LMNEPHGVDPATWDDDVKDYAQEAIDAIRAAGPNNLIIVGGPSWSQNPDGAALNDPNDDD 183
Query: 327 RVVIDVHYYN--LFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 384
++ VH+Y FS + G + N+ QR NG F+G E+
Sbjct: 184 NLIYSVHFYAPSHFSGTWFGCEDKTNLA----QRLRAAANYALDNGIPVFIG----EFGG 235
Query: 385 KDASKQDYQRFANAQLDVYGRATFGWAYWA 414
+A A LD W W+
Sbjct: 236 GNADGPCRDE-AEKWLDYLKENGISWTGWS 264
|
Length = 269 |
| >gnl|CDD|238160 cd00257, Fascin, Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 8e-04
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Query: 6 QKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVA 65
+Y++AE+GG V ANR S G ETF L N Y R ++ +++ ++ G V
Sbjct: 11 GRYLSAEAGGDK-VDANRDSLKGDETFTLEFDNTGKYALRSHDGKYLSADSDGG----VQ 65
Query: 66 VSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTAD 109
+ F + + L A NG ++ L A
Sbjct: 66 LEGHPNADCRFTLEFH--GDGKWALRAENGRYLGGDGSGTLKAS 107
|
Length = 119 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 436 | |||
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 100.0 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 99.96 | |
| cd00257 | 119 | Fascin Fascin-like domain; members include actin-b | 99.75 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 99.62 | |
| PF06268 | 111 | Fascin: Fascin domain; InterPro: IPR022768 This fa | 99.57 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.49 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 99.43 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 99.38 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 99.33 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 99.13 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 99.09 | |
| cd00257 | 119 | Fascin Fascin-like domain; members include actin-b | 99.09 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 98.98 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 98.97 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 98.96 | |
| PF06268 | 111 | Fascin: Fascin domain; InterPro: IPR022768 This fa | 98.94 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 98.92 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 98.87 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 98.85 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 98.79 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 98.77 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 98.76 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 98.75 | |
| PF06229 | 191 | FRG1: FRG1-like family; InterPro: IPR010414 This e | 98.73 | |
| PLN02849 | 503 | beta-glucosidase | 98.72 | |
| PLN02814 | 504 | beta-glucosidase | 98.71 | |
| PLN02998 | 497 | beta-glucosidase | 98.71 | |
| PF12876 | 88 | Cellulase-like: Sugar-binding cellulase-like; Inte | 98.61 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 98.59 | |
| PF06229 | 191 | FRG1: FRG1-like family; InterPro: IPR010414 This e | 98.56 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 98.53 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 98.52 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 98.46 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 98.41 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 98.32 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 98.15 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 97.99 | |
| PF14587 | 384 | Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P | 97.83 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 97.82 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 97.76 | |
| PF02055 | 496 | Glyco_hydro_30: O-Glycosyl hydrolase family 30; In | 97.71 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 97.57 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 97.31 | |
| PF11790 | 239 | Glyco_hydro_cc: Glycosyl hydrolase catalytic core; | 97.27 | |
| COG5309 | 305 | Exo-beta-1,3-glucanase [Carbohydrate transport and | 97.16 | |
| PF04601 | 142 | DUF569: Protein of unknown function (DUF569); Inte | 96.96 | |
| COG5520 | 433 | O-Glycosyl hydrolase [Cell envelope biogenesis, ou | 96.88 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 96.54 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 96.45 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 96.29 | |
| KOG2233 | 666 | consensus Alpha-N-acetylglucosaminidase [Intracell | 96.29 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 96.17 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 96.14 | |
| PF03662 | 319 | Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t | 96.12 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 96.1 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 95.9 | |
| PLN02960 | 897 | alpha-amylase | 95.73 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 95.69 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 95.64 | |
| PF05089 | 333 | NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-b | 95.6 | |
| KOG3962 | 246 | consensus Predicted actin-bundling protein [Cytosk | 95.41 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 95.35 | |
| PLN02161 | 531 | beta-amylase | 95.34 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 95.23 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 95.23 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 95.2 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 95.02 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 95.0 | |
| PLN02803 | 548 | beta-amylase | 94.98 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 94.89 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 94.61 | |
| PLN02801 | 517 | beta-amylase | 94.52 | |
| PLN00197 | 573 | beta-amylase; Provisional | 94.44 | |
| PF07468 | 153 | Agglutinin: Agglutinin; InterPro: IPR008998 Agglut | 94.14 | |
| PLN02705 | 681 | beta-amylase | 94.02 | |
| PLN02905 | 702 | beta-amylase | 93.97 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 93.95 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 93.95 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 93.91 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 93.4 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 93.24 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 93.11 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 93.06 | |
| PLN02361 | 401 | alpha-amylase | 92.99 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 92.4 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 92.31 | |
| PF12891 | 239 | Glyco_hydro_44: Glycoside hydrolase family 44; Int | 92.29 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 92.05 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 91.96 | |
| COG3623 | 287 | SgaU Putative L-xylulose-5-phosphate 3-epimerase [ | 91.85 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 91.82 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 91.8 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 91.58 | |
| PRK07379 | 400 | coproporphyrinogen III oxidase; Provisional | 91.53 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 91.39 | |
| PRK05628 | 375 | coproporphyrinogen III oxidase; Validated | 91.04 | |
| PRK05904 | 353 | coproporphyrinogen III oxidase; Provisional | 90.76 | |
| PRK08208 | 430 | coproporphyrinogen III oxidase; Validated | 90.71 | |
| PRK06294 | 370 | coproporphyrinogen III oxidase; Provisional | 90.5 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 90.08 | |
| PRK08599 | 377 | coproporphyrinogen III oxidase; Provisional | 89.86 | |
| cd02742 | 303 | GH20_hexosaminidase Beta-N-acetylhexosaminidases o | 89.75 | |
| PRK05799 | 374 | coproporphyrinogen III oxidase; Provisional | 89.63 | |
| PF04601 | 142 | DUF569: Protein of unknown function (DUF569); Inte | 89.52 | |
| PRK13347 | 453 | coproporphyrinogen III oxidase; Provisional | 89.43 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 89.3 | |
| PF00167 | 122 | FGF: Fibroblast growth factor; InterPro: IPR002348 | 89.2 | |
| PRK09058 | 449 | coproporphyrinogen III oxidase; Provisional | 89.12 | |
| PLN02784 | 894 | alpha-amylase | 88.95 | |
| COG0635 | 416 | HemN Coproporphyrinogen III oxidase and related Fe | 88.9 | |
| PRK05660 | 378 | HemN family oxidoreductase; Provisional | 88.8 | |
| TIGR00539 | 360 | hemN_rel putative oxygen-independent coproporphyri | 88.73 | |
| PRK09249 | 453 | coproporphyrinogen III oxidase; Provisional | 87.77 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 87.76 | |
| KOG0470 | 757 | consensus 1,4-alpha-glucan branching enzyme/starch | 87.61 | |
| PRK09057 | 380 | coproporphyrinogen III oxidase; Provisional | 87.38 | |
| PRK08446 | 350 | coproporphyrinogen III oxidase; Provisional | 87.25 | |
| COG0366 | 505 | AmyA Glycosidases [Carbohydrate transport and meta | 87.15 | |
| TIGR01212 | 302 | radical SAM protein, TIGR01212 family. This unchar | 87.1 | |
| KOG2566 | 518 | consensus Beta-glucocerebrosidase [Carbohydrate tr | 86.96 | |
| TIGR02401 | 825 | trehalose_TreY malto-oligosyltrehalose synthase. T | 86.85 | |
| cd06565 | 301 | GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) | 85.95 | |
| cd06564 | 326 | GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( | 85.88 | |
| PLN03244 | 872 | alpha-amylase; Provisional | 85.79 | |
| PRK06582 | 390 | coproporphyrinogen III oxidase; Provisional | 85.72 | |
| cd06568 | 329 | GH20_SpHex_like A subgroup of the Glycosyl hydrola | 85.69 | |
| cd06562 | 348 | GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c | 84.57 | |
| PRK14511 | 879 | maltooligosyl trehalose synthase; Provisional | 84.12 | |
| PRK08207 | 488 | coproporphyrinogen III oxidase; Provisional | 83.09 | |
| COG3589 | 360 | Uncharacterized conserved protein [Function unknow | 81.24 | |
| cd06563 | 357 | GH20_chitobiase-like The chitobiase of Serratia ma | 80.27 |
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=284.03 Aligned_cols=248 Identities=29% Similarity=0.422 Sum_probs=174.9
Q ss_pred CCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCC
Q 013777 158 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGF 237 (436)
Q Consensus 158 ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~ 237 (436)
+++++|+.|+++|+|+|||||.|..+.++.++..+.+..+++||++|++|+++||+||||+|..|+..++..
T Consensus 22 ~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~~~w~~~~~-------- 93 (281)
T PF00150_consen 22 ITEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAYGIYVILDLHNAPGWANGGD-------- 93 (281)
T ss_dssp SHHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEESTTCSSSTS--------
T ss_pred CHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhCCCeEEEEeccCcccccccc--------
Confidence 889999999999999999999986665555544566789999999999999999999999999865421111
Q ss_pred CCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC-------hhHHHHHHHHHHHHHHhhCCCeEEEEeCC
Q 013777 238 QEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA-------LDTLKSYYKAGYDAVRKYTSTAYVIMSNR 309 (436)
Q Consensus 238 ~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~-------~~~~~~~~~~~~~aIR~~~p~~~Viv~~~ 309 (436)
.... +...+.+.++|+.||+||++++.+++|||+|||...... .+.+.+++++++++||+++|+++|++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~~i~~~~~ 173 (281)
T PF00150_consen 94 GYGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNHLIIVGGG 173 (281)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSSEEEEEEH
T ss_pred ccccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcceeecCCC
Confidence 1111 345667788999999999999999999999999974332 37789999999999999999999999852
Q ss_pred -CCCCChhh-hhccC-CCCCcEEEEEeecCcCCCCCCCC-ChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC
Q 013777 310 -LGPADHKE-LLSFA-SGLSRVVIDVHYYNLFSNNFNGL-NVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK 385 (436)
Q Consensus 310 -~~~~~~~~-~~~~~-~~~~nvv~~~H~Y~~~~~~~~~~-~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~ 385 (436)
|+ ..... ....+ ....+++|++|.|.++....... ........+........... ...+.|++|||||......
T Consensus 174 ~~~-~~~~~~~~~~P~~~~~~~~~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~pv~~gE~G~~~~~~ 251 (281)
T PF00150_consen 174 GWG-ADPDGAAADNPNDADNNDVYSFHFYDPYDFSDQWNPGNWGDASALESSFRAALNWA-KKNGKPVVVGEFGWSNNDG 251 (281)
T ss_dssp HHH-TBHHHHHHHSTTTTTTSEEEEEEEETTTCHHTTTSTCSHHHHHHHHHHHHHHHHHH-HHTTSEEEEEEEESSTTTS
T ss_pred ccc-cccchhhhcCcccccCceeEEeeEeCCCCcCCccccccchhhhHHHHHHHHHHHHH-HHcCCeEEEeCcCCcCCCC
Confidence 33 22222 22232 24789999999999764211111 11111222222223333333 3445679999999863211
Q ss_pred CcCHHHHHHHHHHHHHHHccCCCcEEEEceecCC
Q 013777 386 DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 419 (436)
Q Consensus 386 ~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~ 419 (436)
. ...++..+.++.+++.++||+||+||.++
T Consensus 252 ~----~~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 281 (281)
T PF00150_consen 252 N----GSTDYADAWLDYLEQNGIGWIYWSWKPNS 281 (281)
T ss_dssp C----HHHHHHHHHHHHHHHTTCEEEECEESSSS
T ss_pred C----cCHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 1 23344444477788889999999999863
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=255.09 Aligned_cols=296 Identities=29% Similarity=0.478 Sum_probs=204.9
Q ss_pred cccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC-CCCCcc--chHHHHHHHHHHH
Q 013777 131 LRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVG--GSSKVLDNAFDWA 207 (436)
Q Consensus 131 ~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~-~~~~~~--~~l~~ld~~v~~a 207 (436)
+.++...+..+|...+...++.||.+++++++|..|+++|||+||||++||.+ .+.. ..|+.. ..+.+||++|+||
T Consensus 47 ~~~~~~~g~~lg~~~~~~~~~~~w~~~~~~~~~~~ik~~G~n~VRiPi~~~~~-~~~~~~~p~~~~~~~~~~ld~~I~~a 125 (407)
T COG2730 47 LVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVRIPIGYWAL-QATDGDNPYLIGLTQLKILDEAINWA 125 (407)
T ss_pred eecccccceecCchhhcccchhccchhhhhhHHHHHHHcCCcEEEcccchhhh-hccCCCCCCeecchHHHHHHHHHHHH
Confidence 45566667777877888899999999999999999999999999999999987 3322 345543 5677999999999
Q ss_pred HHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHH
Q 013777 208 EKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSY 287 (436)
Q Consensus 208 ~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~ 287 (436)
+++||+|+||+|.+||++++.++++..+.... ...+.+++++.|++||.||++.+.|+++|++|||+. -...+.|...
T Consensus 126 ~~~gi~V~iD~H~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~w~~ia~~f~~~~~VIg~~~~NEP~~-~~~~~~w~~~ 203 (407)
T COG2730 126 KKLGIYVLIDLHGYPGGNNGHEHSGYTSDYKE-ENENVEATIDIWKFIANRFKNYDTVIGFELINEPNG-IVTSETWNGG 203 (407)
T ss_pred HhcCeeEEEEecccCCCCCCcCcccccccccc-cchhHHHHHHHHHHHHHhccCCCceeeeeeecCCcc-cCCccccccc
Confidence 99999999999999999999999986655443 567889999999999999999999999999999995 1223445555
Q ss_pred HHHHHHHHH-hhCCCe---EEEEeCC-CCC---CChhhh-----------hc-cC-CC---CCcEEEEEeecCcCC---C
Q 013777 288 YKAGYDAVR-KYTSTA---YVIMSNR-LGP---ADHKEL-----------LS-FA-SG---LSRVVIDVHYYNLFS---N 340 (436)
Q Consensus 288 ~~~~~~aIR-~~~p~~---~Viv~~~-~~~---~~~~~~-----------~~-~~-~~---~~nvv~~~H~Y~~~~---~ 340 (436)
..++++.|| +....+ +|.+++. +.. .....+ .. +. .. ....+++.|.|.+.. .
T Consensus 204 ~~~A~~~v~~~i~~~~~~~~I~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~ 283 (407)
T COG2730 204 DDEAYDVVRNAILSNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTANKHLYAPHVYGDDVLNGG 283 (407)
T ss_pred hHHHHHHHHhhhhhcCceEEEEECcccccCCeeeccCCCccccccccCCceeeeccchhhhccceeccceeecchhhcCC
Confidence 577888885 444444 3444321 111 000000 00 11 12 234455555553211 0
Q ss_pred CCC---CCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCC-C----CCcCHHHHHHHHHHHHHHHccCCCcEEE
Q 013777 341 NFN---GLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN-V----KDASKQDYQRFANAQLDVYGRATFGWAY 412 (436)
Q Consensus 341 ~~~---~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~-~----~~~~~~~~~~~~~~q~~~~~~~~~Gw~~ 412 (436)
.+. ..+..+. .+..+...+....+.++.++++||||...+ . .....+..+.++..+.+++.. ..+|.+
T Consensus 284 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~Ge~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~W~~ 359 (407)
T COG2730 284 SWTVGGEFDLAET---DCAIWLNYVGHGARKNGYPTVIGEFGGNYNANNPNPQDERKDNVKVYLENQLDVFDT-TTYWIN 359 (407)
T ss_pred CCCccCCcccccc---cceeeecceeecccccceeeeeccccCccccCCCCccchhhHHHHHHhhhhhhhccc-eeEEEe
Confidence 011 1111111 111222233333345677899999998773 1 245667788999999999996 899999
Q ss_pred EceecC-CCCCChHHHHhCCCc
Q 013777 413 WAHKCE-ANHWSLKWMIENGYI 433 (436)
Q Consensus 413 W~~k~~-~~~Ws~~~~~~~g~~ 433 (436)
|+++.+ ...|+++.....+.+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~ 381 (407)
T COG2730 360 NPWSGGNDTGYDIEDDINLGLF 381 (407)
T ss_pred ecccCCCCCccchhhcchhhcc
Confidence 999997 478888776665544
|
|
| >cd00257 Fascin Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-17 Score=141.36 Aligned_cols=104 Identities=26% Similarity=0.347 Sum_probs=92.3
Q ss_pred CCcccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEE
Q 013777 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVR 80 (436)
Q Consensus 1 ~s~~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~ 80 (436)
||. +|||||+|.+| ..|.|||+.+++||+|+|.+.++++++||+.||+||+++.. +.|.|+++ ++++|+|++..
T Consensus 7 rs~-~gkyl~~~~~g-~~v~a~~~~~~~~e~F~l~~~~~g~v~Lrs~~G~yls~~~~---g~l~~~~~-~~~~e~F~~e~ 80 (119)
T cd00257 7 RSV-NGRYLSAEAGG-DKVDANRDSLKGDETFTLEFDNTGKYALRSHDGKYLSADSD---GGVQLEGH-PNADCRFTLEF 80 (119)
T ss_pred EEc-CCCEEEEeccC-CEEEEcCccCCCceEEEEEECCCCeEEEEECCCcEEEEECC---CCEEecCC-CCCCcEEEEEE
Confidence 466 99999999988 58999999999999999999999999999999999999873 35899999 99999999998
Q ss_pred cCCCCcceEEeccCCceEEEeeCeEEEcCCCC
Q 013777 81 KDGDSSRVRLSASNGMFIQAISETRLTADYGS 112 (436)
Q Consensus 81 ~~~~~~~v~i~~~nG~~lq~~~~~~v~a~~~~ 112 (436)
.+++ .+.||+.||+||.++....+.++...
T Consensus 81 ~~~g--~~al~~~~G~yl~~~~~g~l~~~~~~ 110 (119)
T cd00257 81 HGDG--KWALRAENGRYLGGDGSGTLKASSET 110 (119)
T ss_pred CCCC--eEEEEcCCCCEEeecCCCeEEEecCC
Confidence 7644 68999999999999877777777653
|
|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.1e-14 Score=140.11 Aligned_cols=226 Identities=22% Similarity=0.330 Sum_probs=134.3
Q ss_pred CCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCC-----CCCCCCCCCCCC
Q 013777 158 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA-----APGSQNGNEHSA 232 (436)
Q Consensus 158 ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~-----~pg~qng~~~sg 232 (436)
..++-|+.||+.|+|+|||-+ +.+|...+ -..++...++.+.|+++||+|+||+|- .||.|.
T Consensus 25 ~~~d~~~ilk~~G~N~vRlRv----wv~P~~~g---~~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~------ 91 (332)
T PF07745_consen 25 QEKDLFQILKDHGVNAVRLRV----WVNPYDGG---YNDLEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQN------ 91 (332)
T ss_dssp SB--HHHHHHHTT--EEEEEE-----SS-TTTT---TTSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B------
T ss_pred CCCCHHHHHHhcCCCeEEEEe----ccCCcccc---cCCHHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCC------
Confidence 347889999999999999977 34554311 136788888899999999999999994 455543
Q ss_pred CCCCCCCCC----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCC-------CCCCChhHHHHHHHHHHHHHHhhCC
Q 013777 233 TRDGFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPL-------APGVALDTLKSYYKAGYDAVRKYTS 300 (436)
Q Consensus 233 ~~~~~~~w~----~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~-------~~~~~~~~~~~~~~~~~~aIR~~~p 300 (436)
-+..|. +...+...++-+.+.+.+++.- ..-.+++-||-. ....+.+.+.++...++++||+.+|
T Consensus 92 ---~P~aW~~~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ll~ag~~AVr~~~p 168 (332)
T PF07745_consen 92 ---KPAAWANLSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGMLWPDGKPSNWDNLAKLLNAGIKAVREVDP 168 (332)
T ss_dssp -----TTCTSSSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESSSGGGESTBTTTCTT-HHHHHHHHHHHHHHHHTHSS
T ss_pred ---CCccCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCccccccccCcCCCccCHHHHHHHHHHHHHHHHhcCC
Confidence 234565 2222333334444444444432 233478999943 3345678899999999999999999
Q ss_pred CeEEEEeCCCCCCCh---hhhhccC--CCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEe
Q 013777 301 TAYVIMSNRLGPADH---KELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 375 (436)
Q Consensus 301 ~~~Viv~~~~~~~~~---~~~~~~~--~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~v 375 (436)
+..|+++-.-+ .+. ..|++.. .+.+-.|+.+++|+.|+. .++.+.. .+..+.++.+++|+|
T Consensus 169 ~~kV~lH~~~~-~~~~~~~~~f~~l~~~g~d~DviGlSyYP~w~~---------~l~~l~~----~l~~l~~ry~K~V~V 234 (332)
T PF07745_consen 169 NIKVMLHLANG-GDNDLYRWFFDNLKAAGVDFDVIGLSYYPFWHG---------TLEDLKN----NLNDLASRYGKPVMV 234 (332)
T ss_dssp TSEEEEEES-T-TSHHHHHHHHHHHHHTTGG-SEEEEEE-STTST----------HHHHHH----HHHHHHHHHT-EEEE
T ss_pred CCcEEEEECCC-CchHHHHHHHHHHHhcCCCcceEEEecCCCCcc---------hHHHHHH----HHHHHHHHhCCeeEE
Confidence 99999982211 121 2232211 356778999999976542 2233322 233343334667999
Q ss_pred ecccccCCC------------------CCcCHHHHHHHHHHHHHHHcc----CCCcEEEE
Q 013777 376 GEWTCEWNV------------------KDASKQDYQRFANAQLDVYGR----ATFGWAYW 413 (436)
Q Consensus 376 GEwg~~~~~------------------~~~~~~~~~~~~~~q~~~~~~----~~~Gw~~W 413 (436)
-|.+..+.. -..+.+..++|+++.+++-.+ .+.|-+||
T Consensus 235 ~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~~~v~~~p~~~g~GvfYW 294 (332)
T PF07745_consen 235 VETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLINAVKNVPNGGGLGVFYW 294 (332)
T ss_dssp EEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHHHHHHTS--TTEEEEEEE
T ss_pred EeccccccccccccccccCccccccCCCCCCHHHHHHHHHHHHHHHHHhccCCeEEEEee
Confidence 999865541 113567788888888776544 78999999
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >PF06268 Fascin: Fascin domain; InterPro: IPR022768 This family consists of several eukaryotic fascin or singed proteins | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-14 Score=120.44 Aligned_cols=100 Identities=33% Similarity=0.464 Sum_probs=88.5
Q ss_pred ccEEEEecCCCceEEEcCCCCCCcceEEEEEecC-CeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEEcCCC
Q 013777 6 QKYIAAESGGGTIVVANRTSASGWETFRLWRVNE-TFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGD 84 (436)
Q Consensus 6 ~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~~~ 84 (436)
++|+++|..|+. |.|||...+.||+|+|...++ ..+.||+++|+|++++. .+.|+|++++++++++|+|+.+
T Consensus 2 ~~~~~~~k~~~~-l~an~~~~~~~e~f~le~~~~~~~v~lrs~~GkYls~~~---~G~v~~~~~~~~~~~~F~i~~~--- 74 (111)
T PF06268_consen 2 NGYLVSEKFGAH-LNANRASLSDWETFQLEFDDGSYKVALRSHNGKYLSVDS---DGSVVADSETPGPDEFFEIEWH--- 74 (111)
T ss_dssp TEEEEETTCTCB-EEEEESSSSCGGSEEEEEETTEEEEEEECTTSEEEEEET---TSEEEEEESSSSGGGCBEEEEE---
T ss_pred CcEEEEEEcCCE-EECChhcCcccEEEEEEEECCCCEEEEEcCCCCEEEEcC---CCeEEecCCCCCCCcEEEEEEC---
Confidence 689999998655 899999999999999997775 44689999999999987 4569999999999999999999
Q ss_pred CcceEEeccCCceEEEeeCeEEEcCCCC
Q 013777 85 SSRVRLSASNGMFIQAISETRLTADYGS 112 (436)
Q Consensus 85 ~~~v~i~~~nG~~lq~~~~~~v~a~~~~ 112 (436)
+..+.++++||+||++.....+.|+...
T Consensus 75 ~~~~~~~~~nGkYl~~~~~g~l~a~~~~ 102 (111)
T PF06268_consen 75 GGKVALRASNGKYLSAGPNGQLKANATS 102 (111)
T ss_dssp TTEEEEECTTSCEEEEETTTEEEEEESS
T ss_pred CCEEEEECCCCCEEeeCCCCeEEEcCCC
Confidence 3578899999999999988888887764
|
The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture []. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven []. Members of this family are histidine rich, typically contain the repeated motif of HHXH []. ; GO: 0030674 protein binding, bridging, 0051015 actin filament binding; PDB: 1DFC_B 3P53_B 3LLP_A 1HCE_A 1HCD_A. |
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.9e-13 Score=133.78 Aligned_cols=247 Identities=19% Similarity=0.283 Sum_probs=131.3
Q ss_pred hhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc--CCCCCC---CCC
Q 013777 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL--HAAPGS---QNG 227 (436)
Q Consensus 153 h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl--H~~pg~---qng 227 (436)
||+.-..++|++.|+++|+|+|||....|...+|.+ +.| .+..||++|+.|+++||+|||.+ +..|.. ..+
T Consensus 6 ~~~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~e-G~y---dF~~lD~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~P 81 (374)
T PF02449_consen 6 QWPEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEE-GQY---DFSWLDRVLDLAAKHGIKVILGTPTAAPPAWLYDKYP 81 (374)
T ss_dssp GS-CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBT-TB------HHHHHHHHHHHCTT-EEEEEECTTTS-HHHHCCSG
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEEEechhhccCCC-Cee---ecHHHHHHHHHHHhccCeEEEEecccccccchhhhcc
Confidence 455545599999999999999999655555667755 355 57889999999999999999977 333321 000
Q ss_pred ----CCCCCC------CCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-C------------------
Q 013777 228 ----NEHSAT------RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-G------------------ 278 (436)
Q Consensus 228 ----~~~sg~------~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-~------------------ 278 (436)
.+..|. +.......+..++...++++.|++||+++|+|++|+|-|||... .
T Consensus 82 e~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~~~~~~~~~~~~f~~wLk~kY~ 161 (374)
T PF02449_consen 82 EILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGYHRCYSPACQAAFRQWLKEKYG 161 (374)
T ss_dssp CCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTCTS--SHHHHHHHHHHHHHHHS
T ss_pred cccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCcCcCCChHHHHHHHHHHHHHhC
Confidence 011111 11111112677888999999999999999999999999998641 0
Q ss_pred -----------------------C----------C-----------hhHHHHHHHHHHHHHHhhCCCeEEEEe--CC-CC
Q 013777 279 -----------------------V----------A-----------LDTLKSYYKAGYDAVRKYTSTAYVIMS--NR-LG 311 (436)
Q Consensus 279 -----------------------~----------~-----------~~~~~~~~~~~~~aIR~~~p~~~Viv~--~~-~~ 311 (436)
+ . .+.+..+++...++||+++|+++|... +. ..
T Consensus 162 ti~~LN~aWgt~~ws~~~~~f~~v~~P~~~~~~~~~~~~~D~~rF~~~~~~~~~~~~~~~ir~~~p~~~vt~n~~~~~~~ 241 (374)
T PF02449_consen 162 TIEALNRAWGTAFWSQRYSSFDEVPPPRPTSSPENPAQWLDWYRFQSDRVAEFFRWQADIIREYDPDHPVTTNFMGSWFN 241 (374)
T ss_dssp SHHHHHHHHTTTGGG---SSGGG---S-S-SS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-EEE-EE-TT---
T ss_pred CHHHHHHHHcCCcccCccCcHHhcCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCccccccC
Confidence 0 0 123557888999999999999988754 11 11
Q ss_pred CCChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeeccccc---CCCCC--
Q 013777 312 PADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE---WNVKD-- 386 (436)
Q Consensus 312 ~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~---~~~~~-- 386 (436)
..+...+.. .-.+++.+.|........ ......+....+ . ...+ ..+.|.+|.|.... |...+
T Consensus 242 ~~d~~~~a~-----~~D~~~~d~Y~~~~~~~~-~~~~~~~a~~~d-l---~R~~--~~~kpf~v~E~~~g~~~~~~~~~~ 309 (374)
T PF02449_consen 242 GIDYFKWAK-----YLDVVSWDSYPDGSFDFY-DDDPYSLAFNHD-L---MRSL--AKGKPFWVMEQQPGPVNWRPYNRP 309 (374)
T ss_dssp SS-HHHHGG-----GSSSEEEEE-HHHHHTTT-T--TTHHHHHHH-H---HHHH--TTT--EEEEEE--S--SSSSS---
T ss_pred cCCHHHHHh-----hCCcceeccccCcccCCC-CCCHHHHHHHHH-H---HHhh--cCCCceEeecCCCCCCCCccCCCC
Confidence 122222222 224677888865100000 111111222111 1 1111 24556999999543 21111
Q ss_pred cCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 387 ASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 387 ~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
.....++.+.- ..+....-|-.||.|+..
T Consensus 310 ~~pg~~~~~~~---~~~A~Ga~~i~~~~wr~~ 338 (374)
T PF02449_consen 310 PRPGELRLWSW---QAIAHGADGILFWQWRQS 338 (374)
T ss_dssp --TTHHHHHHH---HHHHTT-S-EEEC-SB--
T ss_pred CCCCHHHHHHH---HHHHHhCCeeEeeeccCC
Confidence 11223333322 223335558889999874
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.5e-11 Score=114.31 Aligned_cols=230 Identities=20% Similarity=0.302 Sum_probs=143.5
Q ss_pred CHHHHHHHHhCCCCEEEecCccccccCCC--CCCCCccc--hHHHHHHHHHHHHHcCCEEEEEcCC-----CCCCCCCCC
Q 013777 159 TDEDFKFLSSNGINAVRIPVGWWIANDPT--PPKPFVGG--SSKVLDNAFDWAEKYGVKVIVDLHA-----APGSQNGNE 229 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRipv~~~~~~~~~--~~~~~~~~--~l~~ld~~v~~a~~~Gi~VilDlH~-----~pg~qng~~ 229 (436)
.++-|+.|++.|+|.|||.+ +.+|. ++.+|..+ .++..-.+-+.|++.||+|++|+|- .|+.|.
T Consensus 65 ~qD~~~iLK~~GvNyvRlRv----wndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFHYSDfwaDPakQ~--- 137 (403)
T COG3867 65 RQDALQILKNHGVNYVRLRV----WNDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFHYSDFWADPAKQK--- 137 (403)
T ss_pred HHHHHHHHHHcCcCeEEEEE----ecCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeeccchhhccChhhcC---
Confidence 35678999999999999976 34553 23345443 4666666778899999999999993 444442
Q ss_pred CCCCCCCCCCCC----hhHHHHHHHHHHHHHHHhCCCCc-eeEEEeecCCCC-------CCCChhHHHHHHHHHHHHHHh
Q 013777 230 HSATRDGFQEWG----DSNVADTVAVIDFLAARYANRPS-LAAIELINEPLA-------PGVALDTLKSYYKAGYDAVRK 297 (436)
Q Consensus 230 ~sg~~~~~~~w~----~~~~~~~~~~~~~lA~ry~~~~~-v~g~eL~NEP~~-------~~~~~~~~~~~~~~~~~aIR~ 297 (436)
.+..|. +.......++-+...+++++.-. +-..++-||-.. .+.+.+.+..+..+++.+||+
T Consensus 138 ------kPkaW~~l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avre 211 (403)
T COG3867 138 ------KPKAWENLNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVRE 211 (403)
T ss_pred ------CcHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCceeccCCCCcChHHHHHHHHHHhhhhhh
Confidence 334565 23333444566666667776543 234788999653 233678899999999999999
Q ss_pred hCCCeEEEEeCCCCC--CChhhhhcc--CCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeE
Q 013777 298 YTSTAYVIMSNRLGP--ADHKELLSF--ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT 373 (436)
Q Consensus 298 ~~p~~~Viv~~~~~~--~~~~~~~~~--~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v 373 (436)
++|+.+|+++-.-+. .-+..+++- ...-+-.|+...+|+.|+.. +..+.. .+.+++....+.|
T Consensus 212 v~p~ikv~lHla~g~~n~~y~~~fd~ltk~nvdfDVig~SyYpyWhgt---------l~nL~~----nl~dia~rY~K~V 278 (403)
T COG3867 212 VSPTIKVALHLAEGENNSLYRWIFDELTKRNVDFDVIGSSYYPYWHGT---------LNNLTT----NLNDIASRYHKDV 278 (403)
T ss_pred cCCCceEEEEecCCCCCchhhHHHHHHHHcCCCceEEeeeccccccCc---------HHHHHh----HHHHHHHHhcCeE
Confidence 999999999822111 112222221 13456788999988766531 222222 2333444456679
Q ss_pred EeecccccCCC---------------C-------CcCHHHHHHHHHHHHHHHccCCCcEEEEc
Q 013777 374 FVGEWTCEWNV---------------K-------DASKQDYQRFANAQLDVYGRATFGWAYWA 414 (436)
Q Consensus 374 ~vGEwg~~~~~---------------~-------~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~ 414 (436)
||-|-+-.+.. . +......++.++++..+=..++.|-+||.
T Consensus 279 mV~Etay~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat~vrDvie~V~nvp~~~GlGvFYWE 341 (403)
T COG3867 279 MVVETAYTYTLEDGDGHENTFPSSEQTGGYPITVQGQATFVRDVIEAVKNVPKSNGLGVFYWE 341 (403)
T ss_pred EEEEecceeeeccCCCCCCcCCcccccCCCceEEechhhHHHHHHHHHHhCCCCCceEEEEec
Confidence 99998753310 0 01122344455555555555799999994
|
|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.2e-11 Score=127.08 Aligned_cols=225 Identities=19% Similarity=0.164 Sum_probs=137.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCC--CCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA--APGSQNGNEHSATRDGF 237 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~--~pg~qng~~~sg~~~~~ 237 (436)
+.||+.||++|+|+||+. .. |. . .++++.|.++||.|+-++-. ...... ..........
T Consensus 316 ~~d~~l~K~~G~N~vR~s-----h~-p~--~----------~~~~~~cD~~GllV~~E~p~~~~~~~~~-~~~~~~~~~~ 376 (604)
T PRK10150 316 VHDHNLMKWIGANSFRTS-----HY-PY--S----------EEMLDLADRHGIVVIDETPAVGLNLSFG-AGLEAGNKPK 376 (604)
T ss_pred HHHHHHHHHCCCCEEEec-----cC-CC--C----------HHHHHHHHhcCcEEEEeccccccccccc-cccccccccc
Confidence 578999999999999982 11 11 1 25678999999999987632 110000 0000000011
Q ss_pred CCCC-----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCC-
Q 013777 238 QEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG- 311 (436)
Q Consensus 238 ~~w~-----~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~- 311 (436)
..|. +...+...+.++.+.+|++++|+|++|.+.|||.. ..+....+++++++.+|+.||+++|.......
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~mv~r~~NHPSIi~Ws~gNE~~~---~~~~~~~~~~~l~~~~k~~DptR~vt~~~~~~~ 453 (604)
T PRK10150 377 ETYSEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPAS---REQGAREYFAPLAELTRKLDPTRPVTCVNVMFA 453 (604)
T ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCceEEEEeeccCCCc---cchhHHHHHHHHHHHHHhhCCCCceEEEecccC
Confidence 1222 34566778889999999999999999999999863 23566789999999999999999998864211
Q ss_pred CCChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCC-------C
Q 013777 312 PADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN-------V 384 (436)
Q Consensus 312 ~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~-------~ 384 (436)
...... ....-.|+++|.|..|.... ......... ....+..+.+...+|+++.|+|+... .
T Consensus 454 ~~~~~~-----~~~~~Dv~~~N~Y~~wy~~~--~~~~~~~~~----~~~~~~~~~~~~~kP~~isEyg~~~~~~~h~~~~ 522 (604)
T PRK10150 454 TPDTDT-----VSDLVDVLCLNRYYGWYVDS--GDLETAEKV----LEKELLAWQEKLHKPIIITEYGADTLAGLHSMYD 522 (604)
T ss_pred Cccccc-----ccCcccEEEEcccceecCCC--CCHHHHHHH----HHHHHHHHHHhcCCCEEEEccCCccccccccCCC
Confidence 000011 12235788998886543111 111111111 11122222222256699999995321 1
Q ss_pred CCcCHHHHHHHHHHHHHHHcc--CCCcEEEEceec
Q 013777 385 KDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKC 417 (436)
Q Consensus 385 ~~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~ 417 (436)
...+.+....+++...+++++ .-+|-+.|++..
T Consensus 523 ~~~~ee~q~~~~~~~~~~~~~~p~~~G~~iW~~~D 557 (604)
T PRK10150 523 DMWSEEYQCAFLDMYHRVFDRVPAVVGEQVWNFAD 557 (604)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCceEEEEEEeeec
Confidence 223455556677777777764 567888898775
|
|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.9e-11 Score=125.77 Aligned_cols=141 Identities=23% Similarity=0.273 Sum_probs=102.9
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|++|++|.|-.+ .|...+.+++..++.++++|+.|.++||.+||+||+..-.+.
T Consensus 51 d~y~~y--~eDi~l~~~~G~~~~R~si~Wsri-~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~Hfd~P~~----- 122 (427)
T TIGR03356 51 DHYHRY--EEDVALMKELGVDAYRFSIAWPRI-FPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYHWDLPQA----- 122 (427)
T ss_pred cHHHhH--HHHHHHHHHcCCCeEEcccchhhc-ccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeeccCCccHH-----
Confidence 566666 899999999999999999998755 444224677789999999999999999999999997532110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-------CC-C-----hh-------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-------GV-A-----LD-------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-------~~-~-----~~-------~~~~~~~~ 290 (436)
......|. +..++.++++++.+++||++.... |.++|||... +. + .. .+.....+
T Consensus 123 --l~~~gGw~~~~~~~~f~~ya~~~~~~~~d~v~~--w~t~NEp~~~~~~~y~~G~~~P~~~~~~~~~~~~hnll~Aha~ 198 (427)
T TIGR03356 123 --LEDRGGWLNRDTAEWFAEYAAVVAERLGDRVKH--WITLNEPWCSAFLGYGLGVHAPGLRDLRAALQAAHHLLLAHGL 198 (427)
T ss_pred --HHhcCCCCChHHHHHHHHHHHHHHHHhCCcCCE--EEEecCcceecccchhhccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 00112455 688899999999999999995433 6899999841 00 1 01 12234557
Q ss_pred HHHHHHhhCCCeEE
Q 013777 291 GYDAVRKYTSTAYV 304 (436)
Q Consensus 291 ~~~aIR~~~p~~~V 304 (436)
+++++|+..|+..|
T Consensus 199 A~~~~~~~~~~~~I 212 (427)
T TIGR03356 199 AVQALRANGPGAQV 212 (427)
T ss_pred HHHHHHHhCCCCeE
Confidence 77888888876444
|
|
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-10 Score=115.08 Aligned_cols=242 Identities=14% Similarity=0.135 Sum_probs=152.5
Q ss_pred hhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC-----CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCC
Q 013777 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNG 227 (436)
Q Consensus 153 h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~-----~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng 227 (436)
||..---.+|++-++.+|++.+|+- + .|..+ +....+....+++..++.|..++|+|+|.+-.-
T Consensus 22 ~~~~~ei~~dle~a~~vg~k~lR~f----i-LDgEdc~d~~G~~na~s~~~y~~~fla~a~~l~lkvlitlivg------ 90 (587)
T COG3934 22 AIGNREIKADLEPAGFVGVKDLRLF----I-LDGEDCRDKEGYRNAGSNVWYAAWFLAPAGYLDLKVLITLIVG------ 90 (587)
T ss_pred HhhhhhhhcccccccCccceeEEEE----E-ecCcchhhhhceecccccHHHHHHHhhhcccCcceEEEEEeec------
Confidence 4433333678888999999999993 2 23211 111223349999999999999999999987532
Q ss_pred CCCCCCCCCCCCCC-----------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC-CCCChhHHHHHHHHHHHHH
Q 013777 228 NEHSATRDGFQEWG-----------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA-PGVALDTLKSYYKAGYDAV 295 (436)
Q Consensus 228 ~~~sg~~~~~~~w~-----------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~-~~~~~~~~~~~~~~~~~aI 295 (436)
+.|-|.+.-...|. +..+....++.+.|.+.||.+|+|+||.+-|||.. ...+...+..|...++..|
T Consensus 91 ~~hmgg~Nw~Ipwag~~~pdn~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~p~s~N~f~~w~~emy~yi 170 (587)
T COG3934 91 LKHMGGTNWRIPWAGEQSPDNVIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEAPISVNNFWDWSGEMYAYI 170 (587)
T ss_pred ccccCcceeEeecCCCCCccccccchhhcccHHHHHHHHhhhhccChHHHHHHhcCCccccccCChhHHHHHHHHHHHHh
Confidence 22222111112221 34556678999999999999999999999999986 3456788999999999999
Q ss_pred HhhCCCeEEEEeCCCCCCChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCC-CeEE
Q 013777 296 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG-PLTF 374 (436)
Q Consensus 296 R~~~p~~~Viv~~~~~~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~-p~v~ 374 (436)
+.+||+|+|-+++...+ +..+.++-....-..-+.|.|.-|+.+. -.++.+.+. ..+....+.-+ .||+
T Consensus 171 K~ldd~hlvsvGD~~sp--~~~~~pyN~r~~vDya~~hLY~hyd~sl---~~r~s~~yg-----~~~l~i~~~~g~~pV~ 240 (587)
T COG3934 171 KWLDDGHLVSVGDPASP--WPQYAPYNARFYVDYAANHLYRHYDTSL---VSRVSTVYG-----KPYLDIPTIMGWQPVN 240 (587)
T ss_pred hccCCCCeeecCCcCCc--ccccCCcccceeeccccchhhhhccCCh---hheeeeeec-----chhhccchhcccceee
Confidence 99999999988864321 1222221111111234778886443211 011111111 11111122234 5799
Q ss_pred eecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 375 VGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 375 vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
+-|||............++.|... ++.-.+.|-.+||+..-
T Consensus 241 leefGfsta~g~e~s~ayfiw~~l---al~~ggdGaLiwclsdf 281 (587)
T COG3934 241 LEEFGFSTAFGQENSPAYFIWIRL---ALDTGGDGALIWCLSDF 281 (587)
T ss_pred ccccCCcccccccccchhhhhhhh---HHhhcCCceEEEEecCC
Confidence 999998765444444556666554 45556789999999763
|
|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.3e-08 Score=100.22 Aligned_cols=120 Identities=20% Similarity=0.294 Sum_probs=82.6
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+.|+..||++|+|+||+.- .| + =.++++.|.++||.|+.++-..... .+...+.. ....
T Consensus 39 ~~d~~l~k~~G~N~iR~~h------~p--~----------~~~~~~~cD~~GilV~~e~~~~~~~--~~~~~~~~-~~~~ 97 (298)
T PF02836_consen 39 ERDLELMKEMGFNAIRTHH------YP--P----------SPRFYDLCDELGILVWQEIPLEGHG--SWQDFGNC-NYDA 97 (298)
T ss_dssp HHHHHHHHHTT-SEEEETT------S--------------SHHHHHHHHHHT-EEEEE-S-BSCT--SSSSTSCT-SCTT
T ss_pred HHHHHHHHhcCcceEEccc------cc--C----------cHHHHHHHhhcCCEEEEeccccccC--ccccCCcc-ccCC
Confidence 6899999999999999821 11 1 1356789999999999988542110 00101100 0000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
-.+...+...+-++.+.+|++++|+|+.|.+.||+ ....+++++++.+|+.||+++|....
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~--------~~~~~~~~l~~~~k~~DptRpv~~~~ 158 (298)
T PF02836_consen 98 DDPEFRENAEQELREMVRRDRNHPSIIMWSLGNES--------DYREFLKELYDLVKKLDPTRPVTYAS 158 (298)
T ss_dssp TSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESS--------HHHHHHHHHHHHHHHH-TTSEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHcCcCcCchheeecCccC--------ccccchhHHHHHHHhcCCCCceeecc
Confidence 01456777888999999999999999999999999 46778899999999999999998764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >cd00257 Fascin Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Probab=99.09 E-value=3e-10 Score=96.20 Aligned_cols=69 Identities=26% Similarity=0.334 Sum_probs=62.6
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEE
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQI 78 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~ 78 (436)
.+||||+++..| .|.|+++ ++.||+|++-..+++.++||+.||+||+++. ++.|.|++++|+++|.|.+
T Consensus 51 ~~G~yls~~~~g--~l~~~~~-~~~~e~F~~e~~~~g~~al~~~~G~yl~~~~---~g~l~~~~~~~~~~e~f~~ 119 (119)
T cd00257 51 HDGKYLSADSDG--GVQLEGH-PNADCRFTLEFHGDGKWALRAENGRYLGGDG---SGTLKASSETVGPDELFEL 119 (119)
T ss_pred CCCcEEEEECCC--CEEecCC-CCCCcEEEEEECCCCeEEEEcCCCCEEeecC---CCeEEEecCCCCccceecC
Confidence 599999998766 5899999 9999999999998899999999999999986 3479999999999999974
|
|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.8e-08 Score=92.09 Aligned_cols=195 Identities=16% Similarity=0.183 Sum_probs=122.1
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-----hhHHHHHHHHHHHHHHHhCCCCceeEEEe
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLAARYANRPSLAAIEL 270 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~-----~~~~~~~~~~~~~lA~ry~~~~~v~g~eL 270 (436)
.++.+|+++++|+++||+| .-|..- +++ ..+.|. +...+.+.++++.+++||++. |..||+
T Consensus 14 n~~~~D~~~~~a~~~gi~v--~gH~l~------W~~----~~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~--i~~wdV 79 (254)
T smart00633 14 NFSGADAIVNFAKENGIKV--RGHTLV------WHS----QTPDWVFNLSKETLLARLENHIKTVVGRYKGK--IYAWDV 79 (254)
T ss_pred ChHHHHHHHHHHHHCCCEE--EEEEEe------ecc----cCCHhhhcCCHHHHHHHHHHHHHHHHHHhCCc--ceEEEE
Confidence 5899999999999999998 344320 111 112232 345677889999999999875 677999
Q ss_pred ecCCCCCCCC---hhHH-----HHHHHHHHHHHHhhCCCeEEEEeCCC-CCC--Ch---hhh----hccCCCCCcEEEEE
Q 013777 271 INEPLAPGVA---LDTL-----KSYYKAGYDAVRKYTSTAYVIMSNRL-GPA--DH---KEL----LSFASGLSRVVIDV 332 (436)
Q Consensus 271 ~NEP~~~~~~---~~~~-----~~~~~~~~~aIR~~~p~~~Viv~~~~-~~~--~~---~~~----~~~~~~~~nvv~~~ 332 (436)
+|||...... ...| ..|+..+++++|+++|+..+++.+-. ... .. ..+ .....+.+.+-+..
T Consensus 80 ~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Ndy~~~~~~~k~~~~~~~v~~l~~~g~~iDgiGlQ~ 159 (254)
T smart00633 80 VNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYNDYNTEEPNAKRQAIYELVKKLKAKGVPIDGIGLQS 159 (254)
T ss_pred eeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEeccCCcCccHHHHHHHHHHHHHHHCCCccceeeeee
Confidence 9999863211 0122 26899999999999999999987411 111 01 111 11123456677788
Q ss_pred eecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHcc--CCCcE
Q 013777 333 HYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR--ATFGW 410 (436)
Q Consensus 333 H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~--~~~Gw 410 (436)
|.+... .+. +.+. +.+..+.+. +.||+|+|+...... +.+...++++..++++-+ ...|.
T Consensus 160 H~~~~~------~~~----~~~~----~~l~~~~~~-g~pi~iTE~dv~~~~---~~~~qA~~~~~~l~~~~~~p~v~gi 221 (254)
T smart00633 160 HLSLGS------PNI----AEIR----AALDRFASL-GLEIQITELDISGYP---NPQAQAADYEEVFKACLAHPAVTGV 221 (254)
T ss_pred eecCCC------CCH----HHHH----HHHHHHHHc-CCceEEEEeecCCCC---cHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 876321 122 2222 223334444 556999999876532 224556667777666654 45799
Q ss_pred EEEceecCCCCCC
Q 013777 411 AYWAHKCEANHWS 423 (436)
Q Consensus 411 ~~W~~k~~~~~Ws 423 (436)
++|.+... .+|.
T Consensus 222 ~~Wg~~d~-~~W~ 233 (254)
T smart00633 222 TVWGVTDK-YSWL 233 (254)
T ss_pred EEeCCccC-Cccc
Confidence 99998763 4553
|
|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.1e-09 Score=111.64 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=89.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|+.|+++.|..+.+...++...+..++..+++|+.|.++||.+||+||+..--+.-
T Consensus 68 D~Yhry--~eDi~l~~~lG~~~yR~si~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~~~P~~l---- 141 (474)
T PRK09852 68 DFYHRY--KEDIALMAEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHL---- 141 (474)
T ss_pred chhhhh--HHHHHHHHHcCCCeEEeeceeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHH----
Confidence 577777 89999999999999999999986654322223467799999999999999999999999986432110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+....|. +..++.+.++++.++++|++.-.. |=.+|||.
T Consensus 142 --~~~~GGW~~~~~~~~F~~ya~~~~~~fgd~Vk~--WiTfNEPn 182 (474)
T PRK09852 142 --VTEYGSWRNRKMVEFFSRYARTCFEAFDGLVKY--WLTFNEIN 182 (474)
T ss_pred --HHhcCCCCCHHHHHHHHHHHHHHHHHhcCcCCe--EEeecchh
Confidence 01123466 688999999999999999986544 55889997
|
|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1e-08 Score=104.04 Aligned_cols=145 Identities=18% Similarity=0.217 Sum_probs=104.9
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.+|++|+|+.|+.|.|-...+....+...+..|+..+++++.|.++||..+|.||+..--+.=.
T Consensus 56 d~YhrY--keDi~L~~emG~~~~R~SI~WsRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~Hfd~P~~L~--- 130 (460)
T COG2723 56 DFYHRY--KEDIALAKEMGLNAFRTSIEWSRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLYHFDLPLWLQ--- 130 (460)
T ss_pred chhhhh--HHHHHHHHHcCCCEEEeeeeEEEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecccCCcHHHh---
Confidence 567777 899999999999999999999765542222245677999999999999999999999999975432111
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC--------CC--hhHHHHHH----------HH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG--------VA--LDTLKSYY----------KA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~--------~~--~~~~~~~~----------~~ 290 (436)
+....|. ...++.++++.+.+++||++.-.. |=.+|||.... .+ ....+..+ ..
T Consensus 131 ---~~ygGW~nR~~i~~F~~ya~~vf~~f~dkVk~--W~TFNE~n~~~~~~y~~~~~~p~~~~~~~~~qa~hh~~lA~A~ 205 (460)
T COG2723 131 ---KPYGGWENRETVDAFARYAATVFERFGDKVKY--WFTFNEPNVVVELGYLYGGHPPGIVDPKAAYQVAHHMLLAHAL 205 (460)
T ss_pred ---hccCCccCHHHHHHHHHHHHHHHHHhcCcceE--EEEecchhhhhcccccccccCCCccCHHHHHHHHHHHHHHHHH
Confidence 1123576 789999999999999999975433 56899998521 11 11133332 35
Q ss_pred HHHHHHhhCCC-eEEEE
Q 013777 291 GYDAVRKYTST-AYVIM 306 (436)
Q Consensus 291 ~~~aIR~~~p~-~~Viv 306 (436)
+++++|+..|+ .+=++
T Consensus 206 avk~~~~~~~~~kIG~~ 222 (460)
T COG2723 206 AVKAIKKINPKGKVGII 222 (460)
T ss_pred HHHHHHhhCCcCceEEE
Confidence 66788888887 44333
|
|
| >PF06268 Fascin: Fascin domain; InterPro: IPR022768 This family consists of several eukaryotic fascin or singed proteins | Back alignment and domain information |
|---|
Probab=98.94 E-value=4.1e-09 Score=88.25 Aligned_cols=69 Identities=23% Similarity=0.307 Sum_probs=62.7
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEE
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQI 78 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~ 78 (436)
.+||||+++.-| .|+|++..++.|++|+|..- ++.+.||..||+||++.. ++.|.|++++|+.+|.|++
T Consensus 43 ~~GkYls~~~~G--~v~~~~~~~~~~~~F~i~~~-~~~~~~~~~nGkYl~~~~---~g~l~a~~~~~~~~elf~~ 111 (111)
T PF06268_consen 43 HNGKYLSVDSDG--SVVADSETPGPDEFFEIEWH-GGKVALRASNGKYLSAGP---NGQLKANATSPGKDELFEY 111 (111)
T ss_dssp TTSEEEEEETTS--EEEEEESSSSGGGCBEEEEE-TTEEEEECTTSCEEEEET---TTEEEEEESSSSGGGEEEE
T ss_pred CCCCEEEEcCCC--eEEecCCCCCCCcEEEEEEC-CCEEEEECCCCCEEeeCC---CCeEEEcCCCCCcceEEeC
Confidence 589999998877 79999999999999999998 788899999999999875 4569999999999999985
|
The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture []. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven []. Members of this family are histidine rich, typically contain the repeated motif of HHXH []. ; GO: 0030674 protein binding, bridging, 0051015 actin filament binding; PDB: 1DFC_B 3P53_B 3LLP_A 1HCE_A 1HCD_A. |
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.1e-09 Score=108.96 Aligned_cols=114 Identities=19% Similarity=0.269 Sum_probs=89.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|+.|++|.|-.+++....+...+..++..+++|+.|.++||.+||+||+..--|.=
T Consensus 66 D~Yhry--~EDI~Lm~elG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L---- 139 (477)
T PRK15014 66 DFYGHY--KEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHL---- 139 (477)
T ss_pred Cccccc--HHHHHHHHHcCCCEEEecccceeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHH----
Confidence 678777 99999999999999999999976643222233567799999999999999999999999876432110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+....|. +..++.+.++.+.++++|++.-.. |-.+|||.
T Consensus 140 --~~~yGGW~n~~~~~~F~~Ya~~~f~~fgdrVk~--WiT~NEp~ 180 (477)
T PRK15014 140 --VQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKY--WMTFNEIN 180 (477)
T ss_pred --HHhcCCCCChHHHHHHHHHHHHHHHHhcCcCCE--EEEecCcc
Confidence 01123465 788999999999999999987543 55899996
|
|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.6e-08 Score=103.54 Aligned_cols=112 Identities=18% Similarity=0.245 Sum_probs=89.8
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|+.|+.+.|-.+. |...+++++..++..+++|+.|.++||..||.||+..--|.=
T Consensus 50 d~yhry--~eDi~L~~~lG~~~yRfSIsWsRI~-P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L---- 122 (467)
T TIGR01233 50 DFYHKY--PVDLELAEEYGVNGIRISIAWSRIF-PTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL---- 122 (467)
T ss_pred chhhhH--HHHHHHHHHcCCCEEEEecchhhcc-CCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEeccCCCCcHHH----
Confidence 577777 8999999999999999999987554 433346778899999999999999999999999986432210
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
.....|. +..++.+.++.+.++++|++ |--|-.+|||..
T Consensus 123 ---~~~GGW~n~~~v~~F~~YA~~~f~~fgd---Vk~WiT~NEP~~ 162 (467)
T TIGR01233 123 ---HSNGDFLNRENIEHFIDYAAFCFEEFPE---VNYWTTFNEIGP 162 (467)
T ss_pred ---HHcCCCCCHHHHHHHHHHHHHHHHHhCC---CCEEEEecchhh
Confidence 1123566 78999999999999999984 434778999984
|
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation. |
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.1e-08 Score=105.25 Aligned_cols=267 Identities=17% Similarity=0.208 Sum_probs=132.7
Q ss_pred chhhhhccCcChhhHHHHHhhhhcCCHHHHHHHH-hCCCCEEEecCccccccCCCCCCCCc----cc----hHHHHHHHH
Q 013777 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFV----GG----SSKVLDNAF 204 (436)
Q Consensus 134 e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia-~~G~N~VRipv~~~~~~~~~~~~~~~----~~----~l~~ld~~v 204 (436)
-|..|-+. ..+...++..| ...++.++ +.||..||+ ++++.+.- ..+. ++ .+..||+++
T Consensus 23 ~W~~~~~~--g~a~~~l~~~~-----q~~l~~~~~~~gf~yvR~---h~l~~ddm--~~~~~~~~~~~~~Ynf~~lD~i~ 90 (486)
T PF01229_consen 23 FWRFCVGS--GRANLLLRADW-----QEQLRELQEELGFRYVRF---HGLFSDDM--MVYSESDEDGIPPYNFTYLDQIL 90 (486)
T ss_dssp GGGSEEEE--S-GGGGGBHHH-----HHHHHHHHCCS--SEEEE---S-TTSTTT--T-EEEEETTEEEEE--HHHHHHH
T ss_pred hhhhhcCC--CchHHHhhHHH-----HHHHHHHHhccCceEEEE---EeeccCch--hhccccccCCCCcCChHHHHHHH
Confidence 34444333 34666676677 46677775 789999999 34442221 0110 11 589999999
Q ss_pred HHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-----hhHHHHHHHHHHHHHHHhCCC----C-ceeEEEeecCC
Q 013777 205 DWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLAARYANR----P-SLAAIELINEP 274 (436)
Q Consensus 205 ~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~-----~~~~~~~~~~~~~lA~ry~~~----~-~v~g~eL~NEP 274 (436)
+...++||+..|.|--.|..- .++.. ..-.|. +...+.+.++++.+++||.+. . .-+-||+.|||
T Consensus 91 D~l~~~g~~P~vel~f~p~~~----~~~~~-~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiWNEP 165 (486)
T PF01229_consen 91 DFLLENGLKPFVELGFMPMAL----ASGYQ-TVFWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIWNEP 165 (486)
T ss_dssp HHHHHCT-EEEEEE-SB-GGG----BSS---EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEESS-T
T ss_pred HHHHHcCCEEEEEEEechhhh----cCCCC-ccccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEEeCcCC
Confidence 999999999999997655321 01100 011111 466778888877777766432 1 22459999999
Q ss_pred CCCC----CChhHHHHHHHHHHHHHHhhCCCeEEEEeC-CCCCCC-hhhhhccC--CCCCcEEEEEeecCcCCCCCCCCC
Q 013777 275 LAPG----VALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPAD-HKELLSFA--SGLSRVVIDVHYYNLFSNNFNGLN 346 (436)
Q Consensus 275 ~~~~----~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~-~~~~~~-~~~~~~~~--~~~~nvv~~~H~Y~~~~~~~~~~~ 346 (436)
.... .+.+.+.++|+.++++||+++|...|--.. .++... ...++.+. ...+-..+++|.|..-........
T Consensus 166 d~~~f~~~~~~~ey~~ly~~~~~~iK~~~p~~~vGGp~~~~~~~~~~~~~l~~~~~~~~~~DfiS~H~y~~~~~~~~~~~ 245 (486)
T PF01229_consen 166 DLKDFWWDGTPEEYFELYDATARAIKAVDPELKVGGPAFAWAYDEWCEDFLEFCKGNNCPLDFISFHSYGTDSAEDINEN 245 (486)
T ss_dssp TSTTTSGGG-HHHHHHHHHHHHHHHHHH-TTSEEEEEEEETT-THHHHHHHHHHHHCT---SEEEEEEE-BESESE-SS-
T ss_pred CcccccCCCCHHHHHHHHHHHHHHHHHhCCCCcccCccccccHHHHHHHHHHHHhcCCCCCCEEEEEecccccccccchh
Confidence 8642 234568899999999999999998753221 122111 13333321 234557899999974111101111
Q ss_pred hhh---hHHHHHHhhhhhHHHhhhcCC--CeEEeecccccCCCCCcCH--HHHHHHH-HHHHHHHccCCCcEEEEceec
Q 013777 347 VQQ---NIDYVNNQRASDLGAVTTSNG--PLTFVGEWTCEWNVKDASK--QDYQRFA-NAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 347 ~~~---~i~~i~~~~~~~~~~~~~~~~--p~v~vGEwg~~~~~~~~~~--~~~~~~~-~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
... ..+.+..........+..... .++.+.||+.......... .....|+ +..++.++..--+..||++-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~tE~n~~~~~~~~~~dt~~~aA~i~k~lL~~~~~~l~~~sywt~sD 324 (486)
T PF01229_consen 246 MYERIEDSRRLFPELKETRPIINDEADPNLPLYITEWNASISPRNPQHDTCFKAAYIAKNLLSNDGAFLDSFSYWTFSD 324 (486)
T ss_dssp EEEEB--HHHHHHHHHHHHHHHHTSSSTT--EEEEEEES-SSTT-GGGGSHHHHHHHHH-HHHHGGGT-SEEEES-SBS
T ss_pred HHhhhhhHHHHHHHHHHHHHHHhhccCCCCceeecccccccCCCcchhccccchhhHHHHHHHhhhhhhhhhhccchhh
Confidence 111 112222222111122222322 3599999987543211111 1223443 335666654344688999965
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.2e-08 Score=104.33 Aligned_cols=112 Identities=21% Similarity=0.286 Sum_probs=89.5
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+. |...+..++..++..+++|+.|.++||..||+||+..--+.=
T Consensus 51 d~Y~ry--~eDi~L~~~lG~~~yRfSIsWsRI~-P~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L---- 123 (469)
T PRK13511 51 DFYHRY--PEDLKLAEEFGVNGIRISIAWSRIF-PDGYGEVNPKGVEYYHRLFAECHKRHVEPFVTLHHFDTPEAL---- 123 (469)
T ss_pred chhhhh--HHHHHHHHHhCCCEEEeeccHhhcC-cCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCcHHH----
Confidence 577777 9999999999999999999987554 433345678899999999999999999999999986432210
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
.....|. +...+.+.++.+.++++|++ |--|-.+|||..
T Consensus 124 ---~~~GGW~n~~~v~~F~~YA~~~~~~fgd---Vk~W~T~NEP~~ 163 (469)
T PRK13511 124 ---HSNGDWLNRENIDHFVRYAEFCFEEFPE---VKYWTTFNEIGP 163 (469)
T ss_pred ---HHcCCCCCHHHHHHHHHHHHHHHHHhCC---CCEEEEccchhh
Confidence 0123466 78899999999999999998 333668999974
|
|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.77 E-value=2e-08 Score=104.54 Aligned_cols=141 Identities=20% Similarity=0.267 Sum_probs=99.5
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+ .|.+ .+.+++..++..+++|+.++++||.+||+||+..--+.
T Consensus 55 d~y~~y--~eDi~l~~~lg~~~yRfsi~W~Ri-~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~~~P~~---- 127 (455)
T PF00232_consen 55 DHYHRY--KEDIALMKELGVNAYRFSISWSRI-FPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYHFDLPLW---- 127 (455)
T ss_dssp GHHHHH--HHHHHHHHHHT-SEEEEE--HHHH-STTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS--BHH----
T ss_pred cchhhh--hHHHHHHHhhccceeeeecchhhe-eecccccccCHhHhhhhHHHHHHHHhhccceeeeeeecccccc----
Confidence 577666 899999999999999999998655 4543 45677889999999999999999999999997521100
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC------------CC-Ch-------hHHHHHHH
Q 013777 231 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------------GV-AL-------DTLKSYYK 289 (436)
Q Consensus 231 sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~------------~~-~~-------~~~~~~~~ 289 (436)
......|. +...+.+.++.+.++++|++.-.. |-.+|||... +. +. ..+.....
T Consensus 128 ---l~~~ggw~~~~~~~~F~~Ya~~~~~~~gd~V~~--w~T~NEp~~~~~~~y~~g~~~p~~~~~~~~~~~~h~~l~AHa 202 (455)
T PF00232_consen 128 ---LEDYGGWLNRETVDWFARYAEFVFERFGDRVKY--WITFNEPNVFALLGYLYGGFPPGRDSLKAFYQAAHNLLLAHA 202 (455)
T ss_dssp ---HHHHTGGGSTHHHHHHHHHHHHHHHHHTTTBSE--EEEEETHHHHHHHHHTSSSSTTCSSTHHHHHHHHHHHHHHHH
T ss_pred ---eeecccccCHHHHHHHHHHHHHHHHHhCCCcce--EEeccccceeeccccccccccccccccchhhHHHhhHHHHHH
Confidence 00012354 688999999999999999986443 5689999841 10 11 11334456
Q ss_pred HHHHHHHhhCCCeEE
Q 013777 290 AGYDAVRKYTSTAYV 304 (436)
Q Consensus 290 ~~~~aIR~~~p~~~V 304 (436)
++++++|+..++..|
T Consensus 203 ~A~~~~~~~~~~~~I 217 (455)
T PF00232_consen 203 KAVKAIKEKYPDGKI 217 (455)
T ss_dssp HHHHHHHHHTCTSEE
T ss_pred HHHHHHhhcccceEE
Confidence 788899998887655
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.9e-08 Score=102.49 Aligned_cols=115 Identities=17% Similarity=0.233 Sum_probs=89.2
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+++...++...+..++..+++|+.|.++||.+||.||+..--|.=.
T Consensus 70 d~Yhry--~eDi~Lm~~lG~~aYRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H~dlP~~L~--- 144 (478)
T PRK09593 70 DMYHHY--KEDIALFAEMGFKTYRMSIAWTRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTITHFDCPMHLI--- 144 (478)
T ss_pred chHHhh--HHHHHHHHHcCCCEEEEecchhhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecccCCCHHHH---
Confidence 577777 999999999999999999999755432112335778999999999999999999999999864322100
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
+....|. +...+.+.++.+.++++|++.-.. |=.+|||..
T Consensus 145 ---~~~GGW~n~~~v~~F~~YA~~~~~~fgdrVk~--WiT~NEP~~ 185 (478)
T PRK09593 145 ---EEYGGWRNRKMVGFYERLCRTLFTRYKGLVKY--WLTFNEINM 185 (478)
T ss_pred ---hhcCCCCChHHHHHHHHHHHHHHHHhcCcCCE--EEeecchhh
Confidence 1123566 678899999999999999986544 558999973
|
|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=98.75 E-value=4e-08 Score=102.39 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=88.4
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+.+....+...+..++..+++|+.|.++||..||.||+..--+.=
T Consensus 64 D~Yhry--~eDi~Lm~~lG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~H~dlP~~L---- 137 (476)
T PRK09589 64 DFYHRY--KEDIALFAEMGFKCFRTSIAWTRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLSHFEMPYHL---- 137 (476)
T ss_pred cHHHhh--HHHHHHHHHcCCCEEEeccchhhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCCHHH----
Confidence 577777 89999999999999999999975543211233567899999999999999999999999986432110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+....|. +..++.+.++.+.++++|++.-.. |=.+|||.
T Consensus 138 --~~~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~--WiT~NEp~ 178 (476)
T PRK09589 138 --VTEYGGWRNRKLIDFFVRFAEVVFTRYKDKVKY--WMTFNEIN 178 (476)
T ss_pred --HHhcCCcCChHHHHHHHHHHHHHHHHhcCCCCE--EEEecchh
Confidence 01123465 688899999999999999985433 55889997
|
|
| >PF06229 FRG1: FRG1-like family; InterPro: IPR010414 This entry represents Frg1 (FSHD region gene 1), a protein that is considered to be a candidate for facioscapulohumeral muscular dystrophy (FSHD) | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.4e-08 Score=87.72 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=56.0
Q ss_pred CcccccEEEEecCCCceEEEcCCCCCCcceEEEEEe-cCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEE
Q 013777 2 STKFQKYIAAESGGGTIVVANRTSASGWETFRLWRV-NETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVR 80 (436)
Q Consensus 2 s~~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~ 80 (436)
++.+|.|.+||.=.- ....++.|.|.+.++ ++++|+||+.+|+||+|+.. +.|+|+++++|+.|+|++|.
T Consensus 6 a~d~G~~t~~ePhd~------~~~p~p~qV~va~~v~~~~~iafKs~~GkYLs~Dk~---G~v~a~sdAiGp~E~f~~V~ 76 (191)
T PF06229_consen 6 ALDNGLFTTGEPHDV------GEGPDPRQVWVATRVPGDEKIAFKSGHGKYLSCDKD---GIVSARSDAIGPQEQFEPVF 76 (191)
T ss_dssp E-TTS-EEE----SS------S----TTT-EEEEE--SSS-EEEEETTS-BEEE-SS---SBEEE--SS--TTTBEEEE-
T ss_pred eeccCCccccCCCcC------CCCCChhHeEEEEEecCCCceEeeccCccEEEEcCC---CcEEEEeecCCCceEEEEEE
Confidence 355677777765321 335678999999999 89999999999999999974 56999999999999999999
Q ss_pred cCCCCcceEEec-cCCceEEEeeCeEEEcCC
Q 013777 81 KDGDSSRVRLSA-SNGMFIQAISETRLTADY 110 (436)
Q Consensus 81 ~~~~~~~v~i~~-~nG~~lq~~~~~~v~a~~ 110 (436)
.++. ..+.. .|+.||.++...-+.++-
T Consensus 77 ~~~~---~a~~~~~~~~FLs~~~~~~i~a~s 104 (191)
T PF06229_consen 77 QDGK---PALFSSSNNKFLSVDEEGDIRADS 104 (191)
T ss_dssp STT-----EEEE-TTS-BEEE-SSS-EEE--
T ss_pred CCCC---eEEEecCCCeEEEEecccCeeecc
Confidence 7644 44555 999999987533344443
|
FSHD is a dominant neuromuscular disorder caused by deletions in a number of tandem repeat units (called D4Z4) located on chromosome 4q35. D4Z4 contains a transcriptional silencer whose deletion causes the over-expression in skeletal muscle of 4q35 genes, including Frg1 [, ]. Frg1 is localised to nucleoli and appears to be a component of the human spliceosome, but its exact function is unknown [].; PDB: 2YUG_A. |
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.7e-08 Score=102.30 Aligned_cols=114 Identities=22% Similarity=0.296 Sum_probs=89.9
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.||++|+|+.|+.|.|-.+. |...+++++..++..+++|+.|.++||..||.||+..--+.=
T Consensus 76 D~YhrY--~eDI~Lm~~lG~~aYRfSIsWsRI~-P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL~H~dlP~~L---- 148 (503)
T PLN02849 76 DGYHKY--KEDVKLMVETGLDAFRFSISWSRLI-PNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTLFHYDHPQYL---- 148 (503)
T ss_pred cHHHhH--HHHHHHHHHcCCCeEEEeccHHhcC-cCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeecCCCCcHHH----
Confidence 577777 8999999999999999999986554 443346678899999999999999999999999986422100
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
.+....|. +...+.+.++.+.++++|++.-.. |=.+|||..
T Consensus 149 --~~~yGGW~nr~~v~~F~~YA~~~f~~fgDrVk~--WiT~NEP~~ 190 (503)
T PLN02849 149 --EDDYGGWINRRIIKDFTAYADVCFREFGNHVKF--WTTINEANI 190 (503)
T ss_pred --HHhcCCcCCchHHHHHHHHHHHHHHHhcCcCCE--EEEecchhh
Confidence 00123465 688999999999999999986544 558999984
|
|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.1e-08 Score=102.06 Aligned_cols=114 Identities=20% Similarity=0.265 Sum_probs=89.9
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.||++|+|+.|+.|.|-.+. |+..+..++..++..+++|+.|.++||.+||.||+..--+.=
T Consensus 74 D~Yhry--~EDI~L~k~lG~~ayRfSIsWsRI~-P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H~dlP~~L---- 146 (504)
T PLN02814 74 DGYHKY--KEDVKLMAEMGLESFRFSISWSRLI-PNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLYHYDLPQSL---- 146 (504)
T ss_pred cHHHhh--HHHHHHHHHcCCCEEEEeccHhhcC-cCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHH----
Confidence 577777 8999999999999999999987554 433345678899999999999999999999999986322100
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
.+.+..|. ++..+.+.++.+.++++|++.-.. |=.+|||..
T Consensus 147 --~~~yGGW~n~~~i~~F~~YA~~~f~~fgdrVk~--WiT~NEP~~ 188 (504)
T PLN02814 147 --EDEYGGWINRKIIEDFTAFADVCFREFGEDVKL--WTTINEATI 188 (504)
T ss_pred --HHhcCCcCChhHHHHHHHHHHHHHHHhCCcCCE--EEeccccch
Confidence 01123566 788999999999999999986443 557999984
|
|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.8e-08 Score=102.10 Aligned_cols=114 Identities=25% Similarity=0.334 Sum_probs=90.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+. |+..+++++..++..+++|+.+.++||.+||.||+..--+.=
T Consensus 79 D~Yhry--~EDi~lmk~lG~~~YRfSIsWsRI~-P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~H~dlP~~L---- 151 (497)
T PLN02998 79 DQYHKY--KEDVKLMADMGLEAYRFSISWSRLL-PSGRGPINPKGLQYYNNLIDELITHGIQPHVTLHHFDLPQAL---- 151 (497)
T ss_pred cHHHhh--HHHHHHHHHcCCCeEEeeccHHhcC-cCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHH----
Confidence 677777 8999999999999999999987554 433345678899999999999999999999999986432110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
.+....|. ++.++.+.++.+.++++|++.-.. |=.+|||..
T Consensus 152 --~~~yGGW~n~~~v~~F~~YA~~~~~~fgdrVk~--WiT~NEP~~ 193 (497)
T PLN02998 152 --EDEYGGWLSQEIVRDFTAYADTCFKEFGDRVSH--WTTINEVNV 193 (497)
T ss_pred --HHhhCCcCCchHHHHHHHHHHHHHHHhcCcCCE--EEEccCcch
Confidence 00123465 688999999999999999986443 558999984
|
|
| >PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.61 E-value=5.4e-08 Score=77.94 Aligned_cols=78 Identities=22% Similarity=0.325 Sum_probs=48.8
Q ss_pred HHHHhCCCCceeEEEeecC-CCCC---------CCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhccCCC
Q 013777 255 LAARYANRPSLAAIELINE-PLAP---------GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASG 324 (436)
Q Consensus 255 lA~ry~~~~~v~g~eL~NE-P~~~---------~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~~~~~ 324 (436)
|.++|+++|.|++|||.|| |... ....+.+.+|+++++.+||+++|+++|.++ .++ .....+... ..
T Consensus 1 iv~~~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pvt~g-~~~-~~~~~~~~~-~~ 77 (88)
T PF12876_consen 1 IVTRFGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPVTSG-FWG-GDWEDLEQL-QA 77 (88)
T ss_dssp -HHHTT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-EE---B---S-TTHHHHS---
T ss_pred CchhhcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcEEee-ccc-CCHHHHHHh-ch
Confidence 4678999999999999999 7621 123467899999999999999999999775 232 222233333 12
Q ss_pred CCcEEEEEeec
Q 013777 325 LSRVVIDVHYY 335 (436)
Q Consensus 325 ~~nvv~~~H~Y 335 (436)
..-.++++|.|
T Consensus 78 ~~~DvisfH~Y 88 (88)
T PF12876_consen 78 ENLDVISFHPY 88 (88)
T ss_dssp TT-SSEEB-EE
T ss_pred hcCCEEeeecC
Confidence 34578999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B. |
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.3e-06 Score=94.80 Aligned_cols=112 Identities=18% Similarity=0.194 Sum_probs=81.5
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc----CCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGSQNGNEHSATRD 235 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl----H~~pg~qng~~~sg~~~ 235 (436)
++||+.||++|+|+||+. .. | .. .++.++|.++||+|+-+. |+... .+...
T Consensus 374 ~~di~lmK~~g~NaVR~s-----Hy-P--~~----------p~fydlcDe~GilV~dE~~~e~hg~~~-------~~~~~ 428 (1027)
T PRK09525 374 VQDILLMKQHNFNAVRCS-----HY-P--NH----------PLWYELCDRYGLYVVDEANIETHGMVP-------MNRLS 428 (1027)
T ss_pred HHHHHHHHHCCCCEEEec-----CC-C--CC----------HHHHHHHHHcCCEEEEecCccccCCcc-------ccCCC
Confidence 689999999999999983 11 1 11 245789999999999885 32110 00000
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 236 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 236 ~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
.. +...+.+.+-++.+..|.+++|+|+.|.+.||+... ....++++.+|+.||+++|...+
T Consensus 429 ~d----p~~~~~~~~~~~~mV~RdrNHPSIi~WSlgNE~~~g--------~~~~~l~~~~k~~DptRpV~y~~ 489 (1027)
T PRK09525 429 DD----PRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGHG--------ANHDALYRWIKSNDPSRPVQYEG 489 (1027)
T ss_pred CC----HHHHHHHHHHHHHHHHhCCCCCEEEEEeCccCCCcC--------hhHHHHHHHHHhhCCCCcEEECC
Confidence 01 344566777789999999999999999999998631 12467889999999999998764
|
|
| >PF06229 FRG1: FRG1-like family; InterPro: IPR010414 This entry represents Frg1 (FSHD region gene 1), a protein that is considered to be a candidate for facioscapulohumeral muscular dystrophy (FSHD) | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.3e-07 Score=86.16 Aligned_cols=74 Identities=26% Similarity=0.368 Sum_probs=44.6
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEEcC
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKD 82 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~ 82 (436)
.+|||||++.-| .|+|+++++|++|+|+++..+++.-.|...|++||+++.. +. |+|++.++|..|.+.|--+.
T Consensus 46 ~~GkYLs~Dk~G--~v~a~sdAiGp~E~f~~V~~~~~~a~~~~~~~~FLs~~~~--~~-i~a~s~~a~~~e~~~iR~~~ 119 (191)
T PF06229_consen 46 GHGKYLSCDKDG--IVSARSDAIGPQEQFEPVFQDGKPALFSSSNNKFLSVDEE--GD-IRADSKTAGENEMIKIRSDA 119 (191)
T ss_dssp TTS-BEEE-SSS--BEEE--SS--TTTBEEEE-STT--EEEE-TTS-BEEE-SS--S--EEE--S---TTT--EEEE-S
T ss_pred cCccEEEEcCCC--cEEEEeecCCCceEEEEEECCCCeEEEecCCCeEEEEecc--cC-eeeccccCCCCceEEEEEec
Confidence 489999999987 8999999999999999998765544444489999999984 33 99999999999988876554
|
FSHD is a dominant neuromuscular disorder caused by deletions in a number of tandem repeat units (called D4Z4) located on chromosome 4q35. D4Z4 contains a transcriptional silencer whose deletion causes the over-expression in skeletal muscle of 4q35 genes, including Frg1 [, ]. Frg1 is localised to nucleoli and appears to be a component of the human spliceosome, but its exact function is unknown [].; PDB: 2YUG_A. |
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.6e-06 Score=94.64 Aligned_cols=114 Identities=20% Similarity=0.203 Sum_probs=80.4
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc----CCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGSQNGNEHSATRD 235 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl----H~~pg~qng~~~sg~~~ 235 (436)
+.|++.||++|+|+||+. +. | +. .++.+.|.++||+|+-+. |..+ ..+..
T Consensus 358 ~~dl~lmK~~g~NavR~s-----Hy-P--~~----------~~fydlcDe~GllV~dE~~~e~~g~~-------~~~~~- 411 (1021)
T PRK10340 358 EKDIQLMKQHNINSVRTA-----HY-P--ND----------PRFYELCDIYGLFVMAETDVESHGFA-------NVGDI- 411 (1021)
T ss_pred HHHHHHHHHCCCCEEEec-----CC-C--CC----------HHHHHHHHHCCCEEEECCcccccCcc-------ccccc-
Confidence 688999999999999983 11 1 11 245789999999999875 3321 11100
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 236 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 236 ~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
....-.+...+.+++-++.+.+|++++|+|+.|.+.||.... ...+++++.+|+.||+++|..+
T Consensus 412 ~~~~~~p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~~~g--------~~~~~~~~~~k~~DptR~v~~~ 475 (1021)
T PRK10340 412 SRITDDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYG--------CNIRAMYHAAKALDDTRLVHYE 475 (1021)
T ss_pred ccccCCHHHHHHHHHHHHHHHHhCCCCCEEEEEECccCcccc--------HHHHHHHHHHHHhCCCceEEeC
Confidence 000000234456667788899999999999999999998531 1246889999999999998765
|
|
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.9e-06 Score=80.06 Aligned_cols=122 Identities=20% Similarity=0.248 Sum_probs=69.5
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+.|+..|+++|+|+||+ | ..+|.. --|.+++.+.+.||||||||-....+.+.. +....
T Consensus 56 ~rDi~~l~~LgiNtIRV---Y--~vdp~~----------nHd~CM~~~~~aGIYvi~Dl~~p~~sI~r~------~P~~s 114 (314)
T PF03198_consen 56 KRDIPLLKELGINTIRV---Y--SVDPSK----------NHDECMSAFADAGIYVILDLNTPNGSINRS------DPAPS 114 (314)
T ss_dssp HHHHHHHHHHT-SEEEE---S-----TTS------------HHHHHHHHHTT-EEEEES-BTTBS--TT------S----
T ss_pred HHhHHHHHHcCCCEEEE---E--EeCCCC----------CHHHHHHHHHhCCCEEEEecCCCCccccCC------CCcCC
Confidence 79999999999999999 2 234422 257788889999999999998875443321 11124
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC---ChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
|.....++. ..+...|+..++++||-.-||-..... ...-++...+++=+.|++.+. +.|-|+
T Consensus 115 w~~~l~~~~----~~vid~fa~Y~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~-R~IPVG 180 (314)
T PF03198_consen 115 WNTDLLDRY----FAVIDAFAKYDNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGY-RSIPVG 180 (314)
T ss_dssp --HHHHHHH----HHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS-----EE
T ss_pred CCHHHHHHH----HHHHHHhccCCceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCC-CCCcee
Confidence 543334444 444556788899999999999764321 233455556666666666554 334444
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.1e-06 Score=80.33 Aligned_cols=137 Identities=12% Similarity=0.124 Sum_probs=82.1
Q ss_pred HHHHHHHHhCCCCEEEecCccccc-c-CC--CC--------CC-----CCccchHHHHHHHHHHHHHcCCEEEEE-cCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIA-N-DP--TP--------PK-----PFVGGSSKVLDNAFDWAEKYGVKVIVD-LHAA 221 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~-~-~~--~~--------~~-----~~~~~~l~~ld~~v~~a~~~Gi~VilD-lH~~ 221 (436)
+.-++..++.|||+||+-+--... . .+ .+ +. .+.+.+++.||++|+.|.++||.+-|= +|..
T Consensus 33 ~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~ 112 (289)
T PF13204_consen 33 EQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFTRPNPAYFDHLDRRIEKANELGIEAALVPFWGC 112 (289)
T ss_dssp HHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------TT----HHHHHHHHHHHHHHTT-EEEEESS-HH
T ss_pred HHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEEECC
Confidence 455888999999999996632111 1 11 00 00 134569999999999999999998554 4522
Q ss_pred CCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCC
Q 013777 222 PGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 222 pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
+.. .+.+..+. . .-..+...++++.|++||+..|+|+ |-|.||=. ....-.+.++++.+.||+.+|.
T Consensus 113 ~~~-~~~Wg~~~----~---~m~~e~~~~Y~~yv~~Ry~~~~Nvi-W~l~gd~~----~~~~~~~~w~~~~~~i~~~dp~ 179 (289)
T PF13204_consen 113 PYV-PGTWGFGP----N---IMPPENAERYGRYVVARYGAYPNVI-WILGGDYF----DTEKTRADWDAMARGIKENDPY 179 (289)
T ss_dssp HHH--------T----T---SS-HHHHHHHHHHHHHHHTT-SSEE-EEEESSS------TTSSHHHHHHHHHHHHHH--S
T ss_pred ccc-cccccccc----c---CCCHHHHHHHHHHHHHHHhcCCCCE-EEecCccC----CCCcCHHHHHHHHHHHHhhCCC
Confidence 210 01111110 0 1356788899999999999999998 88999971 2344566777889999999998
Q ss_pred eEEEEeCC
Q 013777 302 AYVIMSNR 309 (436)
Q Consensus 302 ~~Viv~~~ 309 (436)
.++.+++.
T Consensus 180 ~L~T~H~~ 187 (289)
T PF13204_consen 180 QLITIHPC 187 (289)
T ss_dssp S-EEEEE-
T ss_pred CcEEEeCC
Confidence 88888853
|
|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.8e-06 Score=84.32 Aligned_cols=136 Identities=19% Similarity=0.253 Sum_probs=82.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++.++.||++|+|+|-++|.|-. .+|.+ +.|+=+...-|+++++.|+++||+|||-.=-. .++....| |.+.
T Consensus 27 ~~~l~k~ka~G~n~v~~yv~W~~-he~~~-g~~df~g~~dl~~f~~~a~~~gl~vilrpGpy---i~aE~~~g---G~P~ 98 (319)
T PF01301_consen 27 RDRLQKMKAAGLNTVSTYVPWNL-HEPEE-GQFDFTGNRDLDRFLDLAQENGLYVILRPGPY---ICAEWDNG---GLPA 98 (319)
T ss_dssp HHHHHHHHHTT-SEEEEE--HHH-HSSBT-TB---SGGG-HHHHHHHHHHTT-EEEEEEES------TTBGGG---G--G
T ss_pred HHHHHHHHhCCcceEEEeccccc-cCCCC-CcccccchhhHHHHHHHHHHcCcEEEecccce---ecccccch---hhhh
Confidence 78899999999999999998754 45544 45664555779999999999999999864211 11111111 2333
Q ss_pred CC------------hhHHHHHHHHHHHHHHHhCC-----CCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 240 WG------------DSNVADTVAVIDFLAARYAN-----RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 240 w~------------~~~~~~~~~~~~~lA~ry~~-----~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
|- +...+...++++.|++..+. --.|+++++=||... ...-+.|++.+.++.|+...+.
T Consensus 99 Wl~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~GGpII~vQvENEyg~----~~~~~~Y~~~l~~~~~~~g~~~ 174 (319)
T PF01301_consen 99 WLLRKPDIRLRTNDPPFLEAVERWYRALAKIIKPLQYTNGGPIIMVQVENEYGS----YGTDRAYMEALKDAYRDWGIDP 174 (319)
T ss_dssp GGGGSTTS-SSSS-HHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEEESSSGGC----TSS-HHHHHHHHHHHHHTT-SS
T ss_pred hhhccccccccccchhHHHHHHHHHHHHHHHHHhhhhcCCCceehhhhhhhhCC----CcccHhHHHHHHHHHHHhhCcc
Confidence 42 34455555566665554332 236888999999762 2345678888888888888774
Q ss_pred EEEEe
Q 013777 303 YVIMS 307 (436)
Q Consensus 303 ~Viv~ 307 (436)
++...
T Consensus 175 ~~~~t 179 (319)
T PF01301_consen 175 VLLYT 179 (319)
T ss_dssp SBEEE
T ss_pred ceeec
Confidence 44444
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.7e-05 Score=69.80 Aligned_cols=135 Identities=21% Similarity=0.216 Sum_probs=94.9
Q ss_pred HHHHHHHHhCCCCEEEecCc-cccc-cCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVG-WWIA-NDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 235 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~-~~~~-~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~ 235 (436)
+++|+.|++.|+++|=|-.. +... ..|.. +..+....-+.|+.+++.|.++||+|.|.|.-.+.. +..
T Consensus 23 ~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~~~~----w~~---- 94 (166)
T PF14488_consen 23 REEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFDPDY----WDQ---- 94 (166)
T ss_pred HHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCCchh----hhc----
Confidence 79999999999999966321 1100 00110 111223456889999999999999999999876432 211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 236 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 236 ~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
.... ...+....+.+.|.++|+.+|++.||=|-.|+.... ..-...++.+.+.++++.++.+|+|++
T Consensus 95 ~~~~---~~~~~~~~v~~el~~~yg~h~sf~GWYip~E~~~~~---~~~~~~~~~l~~~lk~~s~~~Pv~ISp 161 (166)
T PF14488_consen 95 GDLD---WEAERNKQVADELWQRYGHHPSFYGWYIPYEIDDYN---WNAPERFALLGKYLKQISPGKPVMISP 161 (166)
T ss_pred cCHH---HHHHHHHHHHHHHHHHHcCCCCCceEEEecccCCcc---cchHHHHHHHHHHHHHhCCCCCeEEec
Confidence 1111 234445568899999999999999999999998532 333667788888889998899999885
|
|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.15 E-value=8.6e-05 Score=73.85 Aligned_cols=233 Identities=17% Similarity=0.226 Sum_probs=131.2
Q ss_pred HHHHHHhCCCCEEEecCc-cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EEcCCCCCCCCCCCCCCCCCCC
Q 013777 162 DFKFLSSNGINAVRIPVG-WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSATRDGF 237 (436)
Q Consensus 162 d~~~ia~~G~N~VRipv~-~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vi---lDlH~~pg~qng~~~sg~~~~~ 237 (436)
..+.+-..-||.|=..-. -|....|.++ .+ .++..|++++||+++||.|- |=-|. |.+.+-...
T Consensus 26 ~~~~~~~~~Fn~~t~eN~~Kw~~~e~~~g-~~---~~~~~D~~~~~a~~~g~~vrGH~LvW~~----~~P~w~~~~---- 93 (320)
T PF00331_consen 26 RYRELFAKHFNSVTPENEMKWGSIEPEPG-RF---NFESADAILDWARENGIKVRGHTLVWHS----QTPDWVFNL---- 93 (320)
T ss_dssp HHHHHHHHH-SEEEESSTTSHHHHESBTT-BE---E-HHHHHHHHHHHHTT-EEEEEEEEESS----SS-HHHHTS----
T ss_pred HHHHHHHHhCCeeeeccccchhhhcCCCC-cc---CccchhHHHHHHHhcCcceeeeeEEEcc----cccceeeec----
Confidence 455555566787775422 1223333322 22 57889999999999999985 33332 222111110
Q ss_pred CCCChh----HHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC-----ChhHHH-----HHHHHHHHHHHhhCCCeE
Q 013777 238 QEWGDS----NVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-----ALDTLK-----SYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 238 ~~w~~~----~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~-----~~~~~~-----~~~~~~~~aIR~~~p~~~ 303 (436)
..+.+. ..++..+.++.+++||++...|..||++|||..... ....|. .|...+++..|+.+|+..
T Consensus 94 ~~~~~~~~~~~~~~l~~~I~~v~~~y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~~aF~~A~~~~P~a~ 173 (320)
T PF00331_consen 94 ANGSPDEKEELRARLENHIKTVVTRYKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIADAFRAAREADPNAK 173 (320)
T ss_dssp TTSSBHHHHHHHHHHHHHHHHHHHHTTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHHHHHHHHHHHHTTSE
T ss_pred cCCCcccHHHHHHHHHHHHHHHHhHhccccceEEEEEeeecccCCCccccccCChhhhcccHhHHHHHHHHHHHhCCCcE
Confidence 112212 466677999999999998888999999999986432 011222 588999999999999999
Q ss_pred EEEeCCCCCCCh---------hhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEE
Q 013777 304 VIMSNRLGPADH---------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTF 374 (436)
Q Consensus 304 Viv~~~~~~~~~---------~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~ 374 (436)
+++.+-.--... ..+..-..+.+.+-+..|.-... . ++.+.+ .+..+... |.+|.
T Consensus 174 L~~NDy~~~~~~k~~~~~~lv~~l~~~gvpIdgIG~Q~H~~~~~-------~----~~~i~~----~l~~~~~~-Gl~i~ 237 (320)
T PF00331_consen 174 LFYNDYNIESPAKRDAYLNLVKDLKARGVPIDGIGLQSHFDAGY-------P----PEQIWN----ALDRFASL-GLPIH 237 (320)
T ss_dssp EEEEESSTTSTHHHHHHHHHHHHHHHTTHCS-EEEEEEEEETTS-------S----HHHHHH----HHHHHHTT-TSEEE
T ss_pred EEeccccccchHHHHHHHHHHHHHHhCCCccceechhhccCCCC-------C----HHHHHH----HHHHHHHc-CCceE
Confidence 998742111111 11111123467799999976431 1 222222 22333333 56799
Q ss_pred eecccccCCCCC---cCHHHHHHHHHHHHHHHcc----CCCcEEEEceecCCCCCC
Q 013777 375 VGEWTCEWNVKD---ASKQDYQRFANAQLDVYGR----ATFGWAYWAHKCEANHWS 423 (436)
Q Consensus 375 vGEwg~~~~~~~---~~~~~~~~~~~~q~~~~~~----~~~Gw~~W~~k~~~~~Ws 423 (436)
|+|+-..-.... ...+...++++..++++-+ ...|-++|.+-.. ..|-
T Consensus 238 ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~~v~git~Wg~~D~-~sW~ 292 (320)
T PF00331_consen 238 ITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHPPAAVEGITWWGFTDG-YSWR 292 (320)
T ss_dssp EEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTTHCTEEEEEESSSBTT-GSTT
T ss_pred EEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCCccCCCEEEEECCCCC-Cccc
Confidence 999975433211 1123334455555554432 3568999998773 3443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B .... |
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=5.8e-05 Score=80.89 Aligned_cols=135 Identities=19% Similarity=0.237 Sum_probs=89.6
Q ss_pred CHHHHHHHHhCCCCEEEe-cCccccccCCCCCCCCccchHHHHHHH-HHHHHHcCCEEEEEcCCCCCCCCCCCCC-----
Q 013777 159 TDEDFKFLSSNGINAVRI-PVGWWIANDPTPPKPFVGGSSKVLDNA-FDWAEKYGVKVIVDLHAAPGSQNGNEHS----- 231 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRi-pv~~~~~~~~~~~~~~~~~~l~~ld~~-v~~a~~~Gi~VilDlH~~pg~qng~~~s----- 231 (436)
-++|++.|+++|+|+||+ .|.| .+.+|..+ .|+ +..+|.. ++.|.+.||+|||--- |.+.-+.+-+
T Consensus 32 w~ddl~~mk~~G~N~V~ig~faW-~~~eP~eG-~fd---f~~~D~~~l~~a~~~Gl~vil~t~--P~g~~P~Wl~~~~Pe 104 (673)
T COG1874 32 WMDDLRKMKALGLNTVRIGYFAW-NLHEPEEG-KFD---FTWLDEIFLERAYKAGLYVILRTG--PTGAPPAWLAKKYPE 104 (673)
T ss_pred HHHHHHHHHHhCCCeeEeeeEEe-eccCcccc-ccC---cccchHHHHHHHHhcCceEEEecC--CCCCCchHHhcCChh
Confidence 389999999999999999 7766 45666543 342 3356666 9999999999999652 2110000100
Q ss_pred -------CCCCCCCCCC------hhHHHHHHHHHHHHHHH-hCCCCceeEEEeecCCCC----CCCChhHHHHHHHHHHH
Q 013777 232 -------ATRDGFQEWG------DSNVADTVAVIDFLAAR-YANRPSLAAIELINEPLA----PGVALDTLKSYYKAGYD 293 (436)
Q Consensus 232 -------g~~~~~~~w~------~~~~~~~~~~~~~lA~r-y~~~~~v~g~eL~NEP~~----~~~~~~~~~~~~~~~~~ 293 (436)
+.......|. +.+.+....+.+.|++| |++.|+|++|.+=||=.. -..+...++.|.++-|.
T Consensus 105 iL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v~~w~~dneY~~~~~~~~~~~~~f~~wLk~~yg 184 (673)
T COG1874 105 ILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAVITWQNDNEYGGHPCYCDYCQAAFRLWLKKGYG 184 (673)
T ss_pred heEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCceeEEEccCccCCccccccccHHHHHHHHHhCcc
Confidence 0000111221 45677777899999999 999999999999999432 12344566677777776
Q ss_pred HHHhhCC
Q 013777 294 AVRKYTS 300 (436)
Q Consensus 294 aIR~~~p 300 (436)
.+...+.
T Consensus 185 ~l~~ln~ 191 (673)
T COG1874 185 SLDNLNE 191 (673)
T ss_pred hHHhhhh
Confidence 5555443
|
|
| >PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0046 Score=62.04 Aligned_cols=204 Identities=14% Similarity=0.160 Sum_probs=94.5
Q ss_pred HHHHHHHcCCEEEEEcCC-CCCC--CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC
Q 013777 203 AFDWAEKYGVKVIVDLHA-APGS--QNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG 278 (436)
Q Consensus 203 ~v~~a~~~Gi~VilDlH~-~pg~--qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~ 278 (436)
+++.|+++|+..++-.-. +|.. .||...++ ..+...-.+...+.+..++..++++|+..- .+--++.+|||...-
T Consensus 109 fL~~Ak~rGV~~f~aFSNSPP~~MT~NG~~~g~-~~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~~~W 187 (384)
T PF14587_consen 109 FLKAAKERGVNIFEAFSNSPPWWMTKNGSASGG-DDGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQWNW 187 (384)
T ss_dssp HHHHHHHTT---EEEE-SSS-GGGSSSSSSB-S--SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TTS-G
T ss_pred HHHHHHHcCCCeEEEeecCCCHHHhcCCCCCCC-CccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCCCCC
Confidence 678999999987775444 4432 33332221 111111126778999999999999996554 566789999998631
Q ss_pred ---------CChhHHHHHHHHHHHHHHhhCCCeEEEEeCC--C----CC--CC------hhhhhccC-----CCCCcE--
Q 013777 279 ---------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNR--L----GP--AD------HKELLSFA-----SGLSRV-- 328 (436)
Q Consensus 279 ---------~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~--~----~~--~~------~~~~~~~~-----~~~~nv-- 328 (436)
.+.+...++++.+..++++.+.+..|++++. + .. .+ ...|+... ...++|
T Consensus 188 ~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t~I~~~Ea~~~~~l~~~~~~~~~r~~~i~~ff~~~s~~yi~~l~~v~~ 267 (384)
T PF14587_consen 188 AGGSQEGCHFTNEEQADVIRALDKALKKRGLSTKISACEAGDWEYLYKTDKNDWGRGNQIEAFFNPDSSTYIGDLPNVPN 267 (384)
T ss_dssp G--SS-B----HHHHHHHHHHHHHHHHHHT-S-EEEEEEESSGGGGS---S-TTS---HHHHHHSTTSTT--TT-TTEEE
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEecchhhHHHHhhccCCchhhhhhHHhhcCCCchhhhhccccchh
Confidence 3456778899999999999998887777631 1 10 00 12222211 223343
Q ss_pred EEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhc-CCCeEEeecccccCCC----CCcC--HHH---HHHHHHH
Q 013777 329 VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTS-NGPLTFVGEWTCEWNV----KDAS--KQD---YQRFANA 398 (436)
Q Consensus 329 v~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~-~~p~v~vGEwg~~~~~----~~~~--~~~---~~~~~~~ 398 (436)
+++-|.|..- .+ ...+..++.. ....+.+. .+..++..||+.--+. .+.. .+. ..-|+..
T Consensus 268 ~i~~HsYwt~------~~-~~~l~~~R~~---~~~~~~~~~~~~~~wqtE~~il~~~~~~~~~~g~~~~~~m~~aLy~ar 337 (384)
T PF14587_consen 268 IISGHSYWTD------SP-WDDLRDIRKQ---LADKLDKYSPGLKYWQTEYCILGDNYEIIEGGGYDRDLGMDTALYVAR 337 (384)
T ss_dssp EEEE--TT-S------SS-HHHHHHHHHH---HHHHHHTTSS--EEEE----S----TTT-SSS-HHHHHHH--HHHHHH
T ss_pred heeecccccC------CC-HHHHHHHHHH---HHHHHHhhCcCCceeeeeeeeccCCcccccCCCcccchhHHHHHHHHH
Confidence 6899999541 12 2223333332 22333333 1345899999863221 0111 121 1233333
Q ss_pred HH--HHHccCCCcEEEEceec
Q 013777 399 QL--DVYGRATFGWAYWAHKC 417 (436)
Q Consensus 399 q~--~~~~~~~~Gw~~W~~k~ 417 (436)
++ |+=..+..+|.+|+--.
T Consensus 338 viH~DL~~anassW~wW~a~~ 358 (384)
T PF14587_consen 338 VIHNDLTYANASSWQWWTAIS 358 (384)
T ss_dssp HHHHHHHTS--SEEEEEESEE
T ss_pred HHHhhhhhcccchhHHHHHhc
Confidence 32 33234677999998654
|
|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0024 Score=62.04 Aligned_cols=197 Identities=16% Similarity=0.170 Sum_probs=112.9
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEcCCCC---CCCCCCCCCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEee
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDLHAAP---GSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELI 271 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDlH~~p---g~qng~~~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~ 271 (436)
.++.-|.+++.|++|||.+ |.-+ .+|.+.+..+. ++. +...+...+.+..+++||++. +..||++
T Consensus 80 ~Fe~AD~ia~FAr~h~m~l----hGHtLvW~~q~P~W~~~~-----e~~~~~~~~~~e~hI~tV~~rYkg~--~~sWDVV 148 (345)
T COG3693 80 NFEAADAIANFARKHNMPL----HGHTLVWHSQVPDWLFGD-----ELSKEALAKMVEEHIKTVVGRYKGS--VASWDVV 148 (345)
T ss_pred CccchHHHHHHHHHcCCee----ccceeeecccCCchhhcc-----ccChHHHHHHHHHHHHHHHHhccCc--eeEEEec
Confidence 4788899999999999975 4322 23333332221 133 456667778999999999986 7889999
Q ss_pred cCCCCCCCC--hhHH------HHHHHHHHHHHHhhCCCeEEEEeCC-CCCCCh---------hhhhccCCCCCcEEEEEe
Q 013777 272 NEPLAPGVA--LDTL------KSYYKAGYDAVRKYTSTAYVIMSNR-LGPADH---------KELLSFASGLSRVVIDVH 333 (436)
Q Consensus 272 NEP~~~~~~--~~~~------~~~~~~~~~aIR~~~p~~~Viv~~~-~~~~~~---------~~~~~~~~~~~nvv~~~H 333 (436)
|||...... ...| .++++.++..-|+.+|+..+++.+- ...... ..+..-..+-+.+-+..|
T Consensus 149 NE~vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~NDY~ie~~~~kr~~~~nlI~~LkekG~pIDgiG~QsH 228 (345)
T COG3693 149 NEAVDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVINDYSIEGNPAKRNYVLNLIEELKEKGAPIDGIGIQSH 228 (345)
T ss_pred ccccCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEeecccccCChHHHHHHHHHHHHHHHCCCCccceeeeee
Confidence 999862111 1122 2478889999999999999888752 211111 122222245678999999
Q ss_pred ecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccC--CCCCcCHHHHHH---HHHHHHHHHc--cC
Q 013777 334 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEW--NVKDASKQDYQR---FANAQLDVYG--RA 406 (436)
Q Consensus 334 ~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~--~~~~~~~~~~~~---~~~~q~~~~~--~~ 406 (436)
+=.- + .+.+. .. ..+....+. |-+++|+|.-..- ..+++.+...+. ..+.+...+. ..
T Consensus 229 ~~~~----~--~~~~~----~~----~a~~~~~k~-Gl~i~VTELD~~~~~P~~~~p~~~~~~~~~~~~~f~~~~~~~~~ 293 (345)
T COG3693 229 FSGD----G--PSIEK----MR----AALLKFSKL-GLPIYVTELDMSDYTPDSGAPRLYLQKAASRAKAFLLLLLNPNQ 293 (345)
T ss_pred ecCC----C--CCHHH----HH----HHHHHHhhc-CCCceEEEeeeeccCCCCccHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3211 1 12221 11 123334455 6569999996543 222222221111 1111222221 12
Q ss_pred CCcEEEEceecC
Q 013777 407 TFGWAYWAHKCE 418 (436)
Q Consensus 407 ~~Gw~~W~~k~~ 418 (436)
-.+-++|.+...
T Consensus 294 v~~it~WGi~D~ 305 (345)
T COG3693 294 VKAITFWGITDR 305 (345)
T ss_pred cceEEEeeeccC
Confidence 457789998874
|
|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00014 Score=75.15 Aligned_cols=114 Identities=20% Similarity=0.260 Sum_probs=87.1
Q ss_pred hhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 153 h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+|..| ++|++.|+++|+++.|+.|+|-...+... .....+..++....+|+...++||.+++.|.+..--|.-
T Consensus 89 ~Yh~y--keDv~Lmk~lgv~afRFSIsWSRIlP~G~~~~gVN~~Gi~fY~~LI~eL~~nGI~P~VTLfHwDlPq~L---- 162 (524)
T KOG0626|consen 89 FYHRY--KEDVKLMKELGVDAFRFSISWSRILPNGRLTGGVNEAGIQFYNNLIDELLANGIEPFVTLFHWDLPQAL---- 162 (524)
T ss_pred hhhhh--HHHHHHHHHcCCCeEEEEeehHhhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCeEEEEEecCCCCHHH----
Confidence 44444 89999999999999999999976654322 234567799999999999999999999999865322211
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
.+.+..|. +..++.+.++-+..-++|.|.-.. |-.+|||+.
T Consensus 163 --eDeYgGwLn~~ivedF~~yA~~CF~~fGDrVK~--WiT~NEP~v 204 (524)
T KOG0626|consen 163 --EDEYGGWLNPEIVEDFRDYADLCFQEFGDRVKH--WITFNEPNV 204 (524)
T ss_pred --HHHhccccCHHHHHHHHHHHHHHHHHhccccee--eEEecccce
Confidence 12344566 788899999999999999986433 668999983
|
|
| >PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0035 Score=65.78 Aligned_cols=229 Identities=19% Similarity=0.233 Sum_probs=116.9
Q ss_pred HhCCCCEEEecCccccccC------CCCCC----CCc--cc----hHHHHHHHHHHHHHcCCEEEEEcCCCCCCC--CCC
Q 013777 167 SSNGINAVRIPVGWWIAND------PTPPK----PFV--GG----SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ--NGN 228 (436)
Q Consensus 167 a~~G~N~VRipv~~~~~~~------~~~~~----~~~--~~----~l~~ld~~v~~a~~~Gi~VilDlH~~pg~q--ng~ 228 (436)
.-+|++.+|+||+--.+.. ..+.+ .|. .. .+..|+++++. .-+|+++-..-.+|+.. |+.
T Consensus 110 ~G~g~s~~R~pIgssDfs~~~Yty~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~--~~~lki~aSpWSpP~WMKtn~~ 187 (496)
T PF02055_consen 110 DGIGYSLLRVPIGSSDFSTRPYTYDDVPGDFNLSNFSIAREDKKYKIPLIKEALAI--NPNLKIFASPWSPPAWMKTNGS 187 (496)
T ss_dssp TTT---EEEEEES--SSSSS---ST-STTHTTTTT---HHHHHTTHHHHHHHHHHH--HTT-EEEEEES---GGGBTTSS
T ss_pred CCceEEEEEeeccCcCCcCCcccccCCCCCCccccCCccccchhhHHHHHHHHHHh--CCCcEEEEecCCCCHHHccCCc
Confidence 3479999999997322211 11111 111 00 12333333332 23599999999999742 221
Q ss_pred C-CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC----------CCChhHHHHHHHH-HHHHH
Q 013777 229 E-HSATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP----------GVALDTLKSYYKA-GYDAV 295 (436)
Q Consensus 229 ~-~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~----------~~~~~~~~~~~~~-~~~aI 295 (436)
. ..|...+... +.+.+.+.+++.+..+.|+.+- .|.++-+-|||... ..+++..+.|.+. +..++
T Consensus 188 ~~g~g~l~g~~~--~~y~~~yA~Y~vkfi~aY~~~GI~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l 265 (496)
T PF02055_consen 188 MNGGGSLKGSLG--DEYYQAYADYFVKFIQAYKKEGIPIWAITPQNEPDNGSDPNYPWPSMGWTPEEQADFIKNYLGPAL 265 (496)
T ss_dssp SCSS-BBSCGTT--SHHHHHHHHHHHHHHHHHHCTT--ESEEESSSSCCGGGSTT-SSC--B--HHHHHHHHHHTHHHHH
T ss_pred CcCCCccCCCCC--chhHHHHHHHHHHHHHHHHHCCCCeEEEeccCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHH
Confidence 1 1121111110 3456677777777778888775 78999999999841 1346677888876 77899
Q ss_pred HhhCC--CeEEEEe-CCCCC-CCh-hhhhccC-CCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcC
Q 013777 296 RKYTS--TAYVIMS-NRLGP-ADH-KELLSFA-SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 369 (436)
Q Consensus 296 R~~~p--~~~Viv~-~~~~~-~~~-~~~~~~~-~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 369 (436)
|+.++ +..|++- ..+.. ..+ ...+.-+ ...--..+.+|.|.. + ...+.++.+.+ +..
T Consensus 266 ~~~~~g~d~kI~~~D~n~~~~~~~~~~il~d~~A~~yv~GiA~HwY~g-~------~~~~~l~~~h~----------~~P 328 (496)
T PF02055_consen 266 RKAGLGKDVKILIYDHNRDNLPDYADTILNDPEAAKYVDGIAFHWYGG-D------PSPQALDQVHN----------KFP 328 (496)
T ss_dssp HTSTT-TTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTEEEEEEEETTC-S-------HCHHHHHHHH----------HST
T ss_pred HhcCCCCceEEEEEecCCcccchhhhhhhcChhhHhheeEEEEECCCC-C------chhhHHHHHHH----------HCC
Confidence 99876 5555543 22211 111 1222111 112246799999953 1 11122333221 223
Q ss_pred CCeEEeeccccc-CCCC----CcCHHHHHHHHHHHHHHHccCCCcEEEEcee
Q 013777 370 GPLTFVGEWTCE-WNVK----DASKQDYQRFANAQLDVYGRATFGWAYWAHK 416 (436)
Q Consensus 370 ~p~v~vGEwg~~-~~~~----~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k 416 (436)
...++.+|.+.. +... ..+.+...+|....+..+.....||.+|.+-
T Consensus 329 ~k~l~~TE~~~g~~~~~~~~~~g~w~~~~~y~~~ii~~lnn~~~gw~~WNl~ 380 (496)
T PF02055_consen 329 DKFLLFTEACCGSWNWDTSVDLGSWDRAERYAHDIIGDLNNWVSGWIDWNLA 380 (496)
T ss_dssp TSEEEEEEEESS-STTS-SS-TTHHHHHHHHHHHHHHHHHTTEEEEEEEESE
T ss_pred CcEEEeeccccCCCCcccccccccHHHHHHHHHHHHHHHHhhceeeeeeeee
Confidence 456888998643 2111 1123344566777777777677899999864
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A .... |
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0013 Score=71.85 Aligned_cols=142 Identities=14% Similarity=0.113 Sum_probs=94.5
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++-++.+|++|+|+|=.-|.|- +.+|.+ +.|+=....-|.++++.|++.||+|||-.=-+ ..+.+..| |.+.
T Consensus 62 ~d~L~k~Ka~GlNtV~tYV~Wn-~HEp~~-G~~dF~G~~DL~~Fl~la~e~GLyvilRpGPY---IcAEw~~G---GlP~ 133 (840)
T PLN03059 62 PDLIQKAKDGGLDVIQTYVFWN-GHEPSP-GNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPY---ICAEWNFG---GFPV 133 (840)
T ss_pred HHHHHHHHHcCCCeEEEEeccc-ccCCCC-CeeeccchHHHHHHHHHHHHcCCEEEecCCcc---eeeeecCC---CCch
Confidence 7889999999999999988764 456654 45654556779999999999999999953211 01111111 2333
Q ss_pred CC------------hhHHHHHHHHHHHHHHHhCC-------CCceeEEEeecCCCCCC-CChhHHHHHHHHHHHHHHhhC
Q 013777 240 WG------------DSNVADTVAVIDFLAARYAN-------RPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYT 299 (436)
Q Consensus 240 w~------------~~~~~~~~~~~~~lA~ry~~-------~~~v~g~eL~NEP~~~~-~~~~~~~~~~~~~~~aIR~~~ 299 (436)
|- +...++..++++.|+...+. ---|+++++=||=..-. .....=+.|++.+.+..++.+
T Consensus 134 WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~~G 213 (840)
T PLN03059 134 WLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLG 213 (840)
T ss_pred hhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEEecccccceecccCcchHHHHHHHHHHHHHcC
Confidence 31 35556666677777766643 23578899999953210 001122678888888889988
Q ss_pred CCeEEEEeCC
Q 013777 300 STAYVIMSNR 309 (436)
Q Consensus 300 p~~~Viv~~~ 309 (436)
-+.+++.+++
T Consensus 214 i~VPl~t~dg 223 (840)
T PLN03059 214 TGVPWVMCKQ 223 (840)
T ss_pred CCcceEECCC
Confidence 8888888753
|
|
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.012 Score=65.14 Aligned_cols=109 Identities=20% Similarity=0.241 Sum_probs=74.1
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++|++.||++|+|+||.. +| |.. +...++|.++||+||-|.-..- |... ..
T Consensus 324 ~~dl~lmk~~n~N~vRts-Hy-----P~~------------~~~ydLcDelGllV~~Ea~~~~-------~~~~--~~-- 374 (808)
T COG3250 324 ERDLKLMKEANMNSVRTS-HY-----PNS------------EEFYDLCDELGLLVIDEAMIET-------HGMP--DD-- 374 (808)
T ss_pred HHHHHHHHHcCCCEEEec-CC-----CCC------------HHHHHHHHHhCcEEEEecchhh-------cCCC--CC--
Confidence 789999999999999984 11 211 2467799999999999875431 1110 11
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+...+....-++.+.+|-|++|+|+.|.+.||+..+.. ...++..+.+.+++..+-..
T Consensus 375 --~~~~k~~~~~i~~mver~knHPSIiiWs~gNE~~~g~~--------~~~~~~~~k~~d~~r~~~~~ 432 (808)
T COG3250 375 --PEWRKEVSEEVRRMVERDRNHPSIIIWSLGNESGHGSN--------HWALYRWFKASDPTRPVQYE 432 (808)
T ss_pred --cchhHHHHHHHHHHHHhccCCCcEEEEeccccccCccc--------cHHHHHHHhhcCCccceecc
Confidence 23456666778889999999999999999999874211 12334455555555555444
|
|
| >PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0092 Score=56.81 Aligned_cols=133 Identities=18% Similarity=0.247 Sum_probs=79.0
Q ss_pred HHHHHHHHhCCCCceeEEEeecCCCCC---CCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCC--CCC------Ch-hhh
Q 013777 251 VIDFLAARYANRPSLAAIELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL--GPA------DH-KEL 318 (436)
Q Consensus 251 ~~~~lA~ry~~~~~v~g~eL~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~--~~~------~~-~~~ 318 (436)
.++.+.+.-.+.+.|+ .+|||... ..+++...+.+++.++.+|. +...|+ ++.. ... .+ ..|
T Consensus 55 ~~~~v~~~~~~~~~ll---~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~--~~~~l~-sPa~~~~~~~~~~g~~Wl~~F 128 (239)
T PF11790_consen 55 WLANVQNAHPGSKHLL---GFNEPDLPGQSNMSPEEAAALWKQYMNPLRS--PGVKLG-SPAVAFTNGGTPGGLDWLSQF 128 (239)
T ss_pred HHHHHHhhccCcccee---eecCCCCCCCCCCCHHHHHHHHHHHHhHhhc--CCcEEE-CCeecccCCCCCCccHHHHHH
Confidence 4445554422334555 57999875 36778888888888888885 444443 3322 111 11 334
Q ss_pred hccCC-CCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHH
Q 013777 319 LSFAS-GLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFAN 397 (436)
Q Consensus 319 ~~~~~-~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~ 397 (436)
+.... +..-.++++|.|.. +.+...+.| ..+.+..++||+|+||++.......+.+...+|++
T Consensus 129 ~~~~~~~~~~D~iavH~Y~~--------~~~~~~~~i--------~~~~~~~~kPIWITEf~~~~~~~~~~~~~~~~fl~ 192 (239)
T PF11790_consen 129 LSACARGCRVDFIAVHWYGG--------DADDFKDYI--------DDLHNRYGKPIWITEFGCWNGGSQGSDEQQASFLR 192 (239)
T ss_pred HHhcccCCCccEEEEecCCc--------CHHHHHHHH--------HHHHHHhCCCEEEEeecccCCCCCCCHHHHHHHHH
Confidence 44333 55678999999921 122222222 22222234679999999765444567778899999
Q ss_pred HHHHHHcc
Q 013777 398 AQLDVYGR 405 (436)
Q Consensus 398 ~q~~~~~~ 405 (436)
..+..+++
T Consensus 193 ~~~~~ld~ 200 (239)
T PF11790_consen 193 QALPWLDS 200 (239)
T ss_pred HHHHHHhc
Confidence 88888865
|
|
| >COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.041 Score=52.19 Aligned_cols=207 Identities=15% Similarity=0.180 Sum_probs=126.9
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+.||+.|+..+. .||+ ... .-..|..+...+.+.|++|+|-+.-.+..+
T Consensus 66 ~sDLe~l~~~t~-~IR~------Y~s----------DCn~le~v~pAa~~~g~kv~lGiw~tdd~~-------------- 114 (305)
T COG5309 66 ASDLELLASYTH-SIRT------YGS----------DCNTLENVLPAAEASGFKVFLGIWPTDDIH-------------- 114 (305)
T ss_pred HhHHHHhccCCc-eEEE------eec----------cchhhhhhHHHHHhcCceEEEEEeeccchh--------------
Confidence 689999999988 8997 111 124477888899999999999876543211
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-CCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCC-Chhh
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPA-DHKE 317 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~-~~~~ 317 (436)
...++ ..+..+ .-|.+.+.|.++-+-||-... ..+.+++-.+..++-.++.+.+-+.+|.-.+.|... +-.+
T Consensus 115 ---~~~~~--til~ay-~~~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~vrsav~~agy~gpV~T~dsw~~~~~np~ 188 (305)
T COG5309 115 ---DAVEK--TILSAY-LPYNGWDDVTTVTVGNEALNRNDLTASQLIEYIDDVRSAVKEAGYDGPVTTVDSWNVVINNPE 188 (305)
T ss_pred ---hhHHH--HHHHHH-hccCCCCceEEEEechhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCCceeecccceeeeCChH
Confidence 11222 222222 235667888889999997643 467899999999999999988877776655544211 1122
Q ss_pred hhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCC-----CCCcCHHHH
Q 013777 318 LLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN-----VKDASKQDY 392 (436)
Q Consensus 318 ~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~-----~~~~~~~~~ 392 (436)
+. ...+-++.-.|.|. + ..+..+........+...+....-.+ .+++|||-|=..+ ..-.+.++.
T Consensus 189 l~---~~SDfia~N~~aYw--d----~~~~a~~~~~f~~~q~e~vqsa~g~~-k~~~v~EtGWPS~G~~~G~a~pS~anq 258 (305)
T COG5309 189 LC---QASDFIAANAHAYW--D----GQTVANAAGTFLLEQLERVQSACGTK-KTVWVTETGWPSDGRTYGSAVPSVANQ 258 (305)
T ss_pred Hh---hhhhhhhcccchhc--c----ccchhhhhhHHHHHHHHHHHHhcCCC-ccEEEeeccCCCCCCccCCcCCChhHH
Confidence 32 23467888899993 3 22333322222111122222221122 5699999873221 122466778
Q ss_pred HHHHHHHHHHHccCCCcEEEE
Q 013777 393 QRFANAQLDVYGRATFGWAYW 413 (436)
Q Consensus 393 ~~~~~~q~~~~~~~~~Gw~~W 413 (436)
..|++..+..+.+.+...++-
T Consensus 259 ~~~~~~i~~~~~~~G~d~fvf 279 (305)
T COG5309 259 KIAVQEILNALRSCGYDVFVF 279 (305)
T ss_pred HHHHHHHHhhhhccCccEEEe
Confidence 888888887776666665554
|
|
| >PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.012 Score=50.93 Aligned_cols=96 Identities=17% Similarity=0.172 Sum_probs=57.2
Q ss_pred CCcccccEEEEecCCCc-eEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCC----CCceEEEEec-----CC
Q 013777 1 MSTKFQKYIAAESGGGT-IVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQG----QGNGLVAVSN-----TA 70 (436)
Q Consensus 1 ~s~~~~~~~~a~~~g~~-~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~a~~~-----~~ 70 (436)
+| ..||||+||--|.+ .+--+|.+...-=+=+++.-+...+.||+.-|.|+++.+.. -.+.-+.... ..
T Consensus 13 RS-~~~kYL~ADeDg~~Vs~~~~~~s~na~W~Ve~v~~~~~~v~L~saYGrYL~as~~~~~lG~~G~~v~Q~~~~~~d~~ 91 (142)
T PF04601_consen 13 RS-HHGKYLHADEDGEGVSQDRRGASLNAAWTVERVPGSPNYVRLRSAYGRYLAASDEPALLGHTGRRVVQTDPDRLDSS 91 (142)
T ss_pred Ee-cCCCEEEEcCCCCeEEECCCCCCCcceEEEEEecCCCCEEEEeeccCceEeccCCcCCCCCCCCEEEecCCccCCCC
Confidence 46 78999999765433 33344444332212233333346789999999999997531 1122233222 22
Q ss_pred CCCceEEEEEcCCCCcceEEeccCCceEEEeeC
Q 013777 71 GYSETFQIVRKDGDSSRVRLSASNGMFIQAISE 103 (436)
Q Consensus 71 ~~~e~f~~~~~~~~~~~v~i~~~nG~~lq~~~~ 103 (436)
-.|| -++. +..|.++..+|.||.++|.
T Consensus 92 ~~We---pvr~---g~~V~Lr~~~gr~LRANG~ 118 (142)
T PF04601_consen 92 VEWE---PVRD---GFYVKLRHRSGRYLRANGG 118 (142)
T ss_pred ceEE---EecC---CCEEEEEecCCceEEcCCC
Confidence 2343 3443 3579999999999999864
|
Some family members contain two copies of the region. |
| >COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.083 Score=52.09 Aligned_cols=254 Identities=15% Similarity=0.177 Sum_probs=124.2
Q ss_pred cccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHH-----hCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHH
Q 013777 131 LRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-----SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFD 205 (436)
Q Consensus 131 ~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia-----~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~ 205 (436)
...+.|...++|.-. ...|--+.+..-++.+= ++||..+|+||.--.+.-...+.+ .++.|..+ +
T Consensus 40 ~~~~~Q~IrGFGg~~-----~~Aw~g~lsaa~l~t~Fgng~~~lg~si~Rv~I~~ndfsl~g~~d~----w~kels~A-k 109 (433)
T COG5520 40 VAAKHQVIRGFGGMN-----SSAWAGDLSAAQLETLFGNGANQLGFSILRVPIDSNDFSLGGSADN----WYKELSTA-K 109 (433)
T ss_pred hhhhhceeecccccc-----cchhhhhhHHHHHHHHhcCCccccCceEEEEEecccccccCCCcch----hhhhcccc-h
Confidence 344556666666311 11233334444455442 489999999996321111111112 12222222 2
Q ss_pred HHHHcCCEEEEEcCCCCCCCCC-CCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC-C---
Q 013777 206 WAEKYGVKVIVDLHAAPGSQNG-NEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG-V--- 279 (436)
Q Consensus 206 ~a~~~Gi~VilDlH~~pg~qng-~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~-~--- 279 (436)
-+.++|++|+-.....|.+..- .+..|...+... .+.-..+.+++......++++- .+.++.+-|||.... .
T Consensus 110 ~~in~g~ivfASPWspPa~Mktt~~~ngg~~g~Lk--~e~Ya~yA~~l~~fv~~m~~nGvnlyalSVQNEPd~~p~~d~~ 187 (433)
T COG5520 110 SAINPGMIVFASPWSPPASMKTTNNRNGGNAGRLK--YEKYADYADYLNDFVLEMKNNGVNLYALSVQNEPDYAPTYDWC 187 (433)
T ss_pred hhcCCCcEEEecCCCCchhhhhccCcCCccccccc--hhHhHHHHHHHHHHHHHHHhCCCceeEEeeccCCcccCCCCcc
Confidence 2788999999998888875211 111111111111 1223344555555556666665 678899999998632 1
Q ss_pred --ChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCC-CChh--hhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHH
Q 013777 280 --ALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGP-ADHK--ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYV 354 (436)
Q Consensus 280 --~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~-~~~~--~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i 354 (436)
.+++..+|+. +..+.+..+.-|++.+.+.. .++. -+.+...-..-.++..|.|..-- .++.
T Consensus 188 ~wtpQe~~rF~~---qyl~si~~~~rV~~pes~~~~~~~~dp~lnDp~a~a~~~ilg~H~Ygg~v-----------~~~p 253 (433)
T COG5520 188 WWTPQEELRFMR---QYLASINAEMRVIIPESFKDLPNMSDPILNDPKALANMDILGTHLYGGQV-----------SDQP 253 (433)
T ss_pred cccHHHHHHHHH---HhhhhhccccEEecchhcccccccccccccCHhHhcccceeEeeeccccc-----------ccch
Confidence 2233333433 34445555666666543321 1110 11111111223589999996410 0111
Q ss_pred HHhhhhhHHHhhh--cCCCeEEeecccc-cCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 355 NNQRASDLGAVTT--SNGPLTFVGEWTC-EWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 355 ~~~~~~~~~~~~~--~~~p~v~vGEwg~-~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
. .+.+ -.++.+|+.|... ++++.++.++...-+........+...-|+.+|-+.-+
T Consensus 254 ~--------~lak~~~~gKdlwmte~y~~esd~~s~dr~~~~~~~hi~~gm~~gg~~ayv~W~i~~~ 312 (433)
T COG5520 254 Y--------PLAKQKPAGKDLWMTECYPPESDPNSADREALHVALHIHIGMTEGGFQAYVWWNIRLD 312 (433)
T ss_pred h--------hHhhCCCcCCceEEeecccCCCCCCcchHHHHHHHHHHHhhccccCccEEEEEEEeec
Confidence 0 1112 2266789999854 45543434333333333333334445668899987654
|
|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.1 Score=56.68 Aligned_cols=146 Identities=19% Similarity=0.235 Sum_probs=82.9
Q ss_pred HHHHHHHHhCCCCEEEe-cCcccc-----ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC--
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWI-----ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ-- 225 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~-----~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q-- 225 (436)
+.-++.|+++|+|+|=| ||.... ..++.. +++- =+..+.|.++|+.|.++||+||||+ |..+...
T Consensus 160 ~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~~~~y~~~~~~-~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~ 238 (613)
T TIGR01515 160 DQLIPYVKELGFTHIELLPVAEHPFDGSWGYQVTGYYAPTSR-FGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHGL 238 (613)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCcccccc-cCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccchh
Confidence 44459999999999999 874211 111110 1110 1457899999999999999999997 5433210
Q ss_pred C---C---CCCCCCC-CCCCCCC--------hhHHHHHHHHHHHHHHHhCCCCceeEEEee---------cCCCC--C--
Q 013777 226 N---G---NEHSATR-DGFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELI---------NEPLA--P-- 277 (436)
Q Consensus 226 n---g---~~~sg~~-~~~~~w~--------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~---------NEP~~--~-- 277 (436)
. + +.+.... .....|. +..++..++..+...+.|.=+- + =+|.+ .+|.. +
T Consensus 239 ~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey~iDG-~-R~D~v~~~~~~~~~~~~~~~~~~~ 316 (613)
T TIGR01515 239 AEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFYHIDG-L-RVDAVASMLYLDYSRDEGEWSPNE 316 (613)
T ss_pred hccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCcE-E-EEcCHHHhhhhccccccccccccc
Confidence 0 0 0011000 0112333 4455666677777777764321 1 12221 12210 0
Q ss_pred --CCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 278 --GVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 278 --~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
+.....-..|.+++.+.||+..|+.++|-+.
T Consensus 317 ~~~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~ 349 (613)
T TIGR01515 317 DGGRENLEAVDFLRKLNQTVYEAFPGVVTIAEE 349 (613)
T ss_pred cCCcCChHHHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 0112234679999999999999998888763
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.14 Score=55.87 Aligned_cols=144 Identities=18% Similarity=0.247 Sum_probs=79.6
Q ss_pred HHHHHHHHhCCCCEEEe-cCc------cccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-
Q 013777 160 DEDFKFLSSNGINAVRI-PVG------WWIANDPT---PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ- 225 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~------~~~~~~~~---~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q- 225 (436)
++-++.|+++|+|+|=| ||. .| ..++. .+++- =+..+.|+++|+.|.++||+||||+ |..+...
T Consensus 174 ~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~-GY~~~~y~~i~~~-~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~ 251 (633)
T PRK12313 174 DELIPYVKEMGYTHVEFMPLMEHPLDGSW-GYQLTGYFAPTSR-YGTPEDFMYLVDALHQNGIGVILDWVPGHFPKDDDG 251 (633)
T ss_pred HHHHHHHHHcCCCEEEeCchhcCCCCCCC-CCCCcCcCcCCCC-CCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccc
Confidence 44469999999999986 552 11 11111 01111 1468899999999999999999997 4332210
Q ss_pred -CCCC------CCCC-CCCCCCCC--------hhHHHHHHHHHHHHHHHhCCCCceeEEEee-cC------------C--
Q 013777 226 -NGNE------HSAT-RDGFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELI-NE------------P-- 274 (436)
Q Consensus 226 -ng~~------~sg~-~~~~~~w~--------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~-NE------------P-- 274 (436)
..++ +... ......|. +..++..++.++...+.|.=+- + -+|.. +. |
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~~~iDG-~-R~D~~~~~~~~d~~~~~~~~~~~ 329 (633)
T PRK12313 252 LAYFDGTPLYEYQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDEYHLDG-L-RVDAVSNMLYLDYDEEGEWTPNK 329 (633)
T ss_pred ccccCCCcceeecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCcE-E-EEcChhhhhhcccccccCcCCcc
Confidence 0000 0000 00112342 4455566677777776664321 0 01211 11 1
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 275 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
.....+. .-..+.+.+.+.||+..|+.++|-+.
T Consensus 330 ~~~~~~~-~~~~fl~~~~~~v~~~~p~~~liaE~ 362 (633)
T PRK12313 330 YGGRENL-EAIYFLQKLNEVVYLEHPDVLMIAEE 362 (633)
T ss_pred cCCCCCc-HHHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 1001111 34578999999999999998777663
|
|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.14 Score=56.17 Aligned_cols=146 Identities=19% Similarity=0.229 Sum_probs=82.0
Q ss_pred HHHHHHHHhCCCCEEEe-cCcc------ccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-
Q 013777 160 DEDFKFLSSNGINAVRI-PVGW------WIANDPT---PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ- 225 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~------~~~~~~~---~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q- 225 (436)
++-+..|+++|+|+|=| |+.- |- .++. .+++. -+..+.|.++|+.|.++||+||||+ |......
T Consensus 254 ~~~L~ylk~LG~t~I~LmPi~e~~~~~~wG-Y~~~~~fa~~~~-~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~~ 331 (758)
T PLN02447 254 DDVLPRIKALGYNAVQLMAIQEHAYYGSFG-YHVTNFFAVSSR-SGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTLD 331 (758)
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCC-cCcccCcccccc-cCCHHHHHHHHHHHHHCCCEEEEEeccccccccccc
Confidence 56799999999999988 4411 10 1111 11111 1356889999999999999999997 3322111
Q ss_pred --C-------CCCCCCCCCCCCCCC--------hhHHHHHHHHHHHHHHHhCCC-------Ccee------EEEe---ec
Q 013777 226 --N-------GNEHSATRDGFQEWG--------DSNVADTVAVIDFLAARYANR-------PSLA------AIEL---IN 272 (436)
Q Consensus 226 --n-------g~~~sg~~~~~~~w~--------~~~~~~~~~~~~~lA~ry~~~-------~~v~------g~eL---~N 272 (436)
+ .+.+.+.......|. +..++..++.++...+.|.=+ ..++ +.+. .|
T Consensus 332 gl~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~ 411 (758)
T PLN02447 332 GLNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYN 411 (758)
T ss_pred cccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCcc
Confidence 1 122222111112343 334455556666666665322 1221 0011 12
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 273 EPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 273 EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
|-.....+ ..-..|.+.+-..|++..|+.+.|.++
T Consensus 412 ~~~g~~~d-~~a~~fL~~~N~~i~~~~p~~~~IAEd 446 (758)
T PLN02447 412 EYFGMATD-VDAVVYLMLANDLLHGLYPEAVTIAED 446 (758)
T ss_pred cccCCccC-hHHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 31211123 344678999999999999999888764
|
|
| >KOG2233 consensus Alpha-N-acetylglucosaminidase [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.069 Score=54.52 Aligned_cols=148 Identities=17% Similarity=0.226 Sum_probs=99.3
Q ss_pred HHHHHHHHhCCCCEEEecCcc---cc-c-c--CC--C----------------------CCCCCcc----chHHHHHHHH
Q 013777 160 DEDFKFLSSNGINAVRIPVGW---WI-A-N--DP--T----------------------PPKPFVG----GSSKVLDNAF 204 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~---~~-~-~--~~--~----------------------~~~~~~~----~~l~~ld~~v 204 (436)
|..++.|+=+|||.+=-|.+- |. . . .- . -++|..+ ..+-.-.+++
T Consensus 81 eR~iDWmALnGinl~la~~gQEaIWqkVf~~lgl~~eeldeyftgpAflAW~RMGNl~awgGpLs~aw~~~ql~LqkrIi 160 (666)
T KOG2233|consen 81 EREIDWMALNGINLVLAPLGQEAIWQKVFMGLGLQREELDEYFTGPAFLAWHRMGNLHAWGGPLSPAWMLNQLLLQKRII 160 (666)
T ss_pred HhHhhHHHHcCcceeeccchhHHHHHHHHHHcCCCHHHHHHhcccHHHHHHHHhcCccccCCCCCHHHHHHHHHHHHHHH
Confidence 899999999999999888652 11 0 0 00 0 0123322 2344456799
Q ss_pred HHHHHcCCEEEEEcCC----------CCCCC----CCCCCCCCCC--CC--CCCChhHHHHHHHHHHHHHHHhCCCCcee
Q 013777 205 DWAEKYGVKVIVDLHA----------APGSQ----NGNEHSATRD--GF--QEWGDSNVADTVAVIDFLAARYANRPSLA 266 (436)
Q Consensus 205 ~~a~~~Gi~VilDlH~----------~pg~q----ng~~~sg~~~--~~--~~w~~~~~~~~~~~~~~lA~ry~~~~~v~ 266 (436)
+...+.||.++|--.+ .|.+. ..+++..++- .. ....+-.++---.+++.+.+.|.+..+|.
T Consensus 161 drm~~lGmTpvLPaFaG~VP~al~rlfPesnf~rl~rWn~f~s~~~C~l~v~P~dplF~eIgs~Flr~~~kefG~~tniy 240 (666)
T KOG2233|consen 161 DRMLELGMTPVLPAFAGHVPDALERLFPESNFTRLPRWNNFTSRYSCMLLVSPFDPLFQEIGSTFLRHQIKEFGGVTNIY 240 (666)
T ss_pred HHHHHcCCCccchhhccccHHHHHHhCchhceeeccccCCCCcceeeeEEccCCcchHHHHHHHHHHHHHHHhCCccccc
Confidence 9999999999985442 12110 0111111110 00 00113345566689999999999999999
Q ss_pred EEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 267 AIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 267 g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+-|..||-..+...++-++...+++|++.+++|++++-++.
T Consensus 241 ~~DpFNE~~Pp~sepey~~staaAiyesm~kvdknaVWllQ 281 (666)
T KOG2233|consen 241 SADPFNEILPPESEPEYVKSTAAAIYESMKKVDKNAVWLLQ 281 (666)
T ss_pred ccCcccccCCCCCChHHHHHHHHHHHHHHhccCcceEEeee
Confidence 99999998877778889999999999999999999876665
|
|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.18 Score=53.92 Aligned_cols=138 Identities=20% Similarity=0.281 Sum_probs=76.2
Q ss_pred HHHHHHHhCCCCEEEe-cCc------cccccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCC
Q 013777 161 EDFKFLSSNGINAVRI-PVG------WWIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNG 227 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~------~~~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qng 227 (436)
+.++.|+++|+|+|=| ||. .| ..++.. +++- =+..+.|.++|+.|.++||+||||+ |..+.+..-
T Consensus 115 ~~l~yl~~LGv~~i~L~Pi~~~~~~~~~-GY~~~~~~~~~~~-~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~ 192 (542)
T TIGR02402 115 EKLPYLADLGITAIELMPVAQFPGTRGW-GYDGVLPYAPHNA-YGGPDDLKALVDAAHGLGLGVILDVVYNHFGPEGNYL 192 (542)
T ss_pred HhhHHHHHcCCCEEEeCccccCCCCCCC-CCCccCccccccc-cCCHHHHHHHHHHHHHCCCEEEEEEccCCCCCccccc
Confidence 3489999999999998 542 11 111110 1110 1468899999999999999999997 544322110
Q ss_pred CCCCC--CCCCCCCCC-------h---hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHH
Q 013777 228 NEHSA--TRDGFQEWG-------D---SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAV 295 (436)
Q Consensus 228 ~~~sg--~~~~~~~w~-------~---~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aI 295 (436)
..... .......|. + ..++..++..+..++.|+=+- + =+|++..-.. ..-..+.+++.+++
T Consensus 193 ~~~~~y~~~~~~~~wg~~~n~~~~~~~~vr~~i~~~~~~W~~e~~iDG-f-R~D~~~~~~~-----~~~~~~l~~~~~~~ 265 (542)
T TIGR02402 193 PRYAPYFTDRYSTPWGAAINFDGPGSDEVRRYILDNALYWLREYHFDG-L-RLDAVHAIAD-----TSAKHILEELAREV 265 (542)
T ss_pred cccCccccCCCCCCCCCccccCCCcHHHHHHHHHHHHHHHHHHhCCcE-E-EEeCHHHhcc-----ccHHHHHHHHHHHH
Confidence 00000 001112332 2 444555666666666664221 1 1343332210 11246888888999
Q ss_pred HhhCCC---eEEEEe
Q 013777 296 RKYTST---AYVIMS 307 (436)
Q Consensus 296 R~~~p~---~~Viv~ 307 (436)
|+..|+ .++|.+
T Consensus 266 ~~~~p~~~~~~li~E 280 (542)
T TIGR02402 266 HELAAELRPVHLIAE 280 (542)
T ss_pred HHHCCCCceEEEEEe
Confidence 999887 555444
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.021 Score=51.19 Aligned_cols=59 Identities=24% Similarity=0.295 Sum_probs=40.8
Q ss_pred HHHHHHHhCCCCEEEecCccccc--------cCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA--------NDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~--------~~~~~~~~~~--~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+.++.|+++|+|+|-|+=.+... .++....... -+..+.|+++|+.|+++||+||+|+-
T Consensus 23 ~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 23 EKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred HHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 44779999999999995432211 1111110011 14689999999999999999999985
|
|
| >PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.007 Score=59.66 Aligned_cols=170 Identities=21% Similarity=0.239 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH-HH---HhC-CCC-ceeEEE
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFL-AA---RYA-NRP-SLAAIE 269 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~l-A~---ry~-~~~-~v~g~e 269 (436)
.+++.|++.+.|++-|+++|..|-+..|... .....+.--|..- |+ +|. +.. .|.+||
T Consensus 107 t~~rwd~l~~F~~~tG~~liFgLNAL~g~~~----------------~~~~~~~g~WnssNA~~Ll~Yt~skgy~I~~WE 170 (319)
T PF03662_consen 107 TMSRWDELNNFAQKTGLKLIFGLNALLGRRQ----------------LADRDWDGSWNSSNAQSLLKYTASKGYNIDSWE 170 (319)
T ss_dssp -----HHHHHHHHHHT-EEEEEE-TTTS-HH----------------HHHHHHHHHHHHH-TTTEEEEEESS-GGG----
T ss_pred chhHHHHHHHHHHHhCCEEEEEecccCCCCC----------------CCCCCcCCCCChHHHHHHHHHHHHcCCCccccc
Confidence 4678999999999999999999988765210 0000111222211 11 121 112 466899
Q ss_pred eecCCCCCC----CChhHHHHHHHH---HHHHHHhh-CCCeEEEEeCCCCCCC-hhhhhccCCCCCcEEEEEeecCcCCC
Q 013777 270 LINEPLAPG----VALDTLKSYYKA---GYDAVRKY-TSTAYVIMSNRLGPAD-HKELLSFASGLSRVVIDVHYYNLFSN 340 (436)
Q Consensus 270 L~NEP~~~~----~~~~~~~~~~~~---~~~aIR~~-~p~~~Viv~~~~~~~~-~~~~~~~~~~~~nvv~~~H~Y~~~~~ 340 (436)
|.|||.... ++..++.+=+.+ +++.|... .+...|+-.++..... +.+|+....+..-.+++.|+|+. ++
T Consensus 171 LGNEl~g~g~~~~v~a~qyakD~~~Lr~il~~iy~~~~~~P~v~gP~~~~d~~w~~~FL~~~g~~~vD~vT~H~Y~l-g~ 249 (319)
T PF03662_consen 171 LGNELNGSGVGASVSAEQYAKDFIQLRKILNEIYKNALPGPLVVGPGGFFDADWLKEFLKASGPGVVDAVTWHHYNL-GS 249 (319)
T ss_dssp ----HHHHSSSTT--HHHHHHHH---HHHHHHHHHH-TT---EEEEEESS-GGGHHHHHHHTTTT--SEEEEEEEEE---
T ss_pred cccccCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCCeEECCCCCCCHHHHHHHHHhcCCCccCEEEEEecCC-CC
Confidence 999998532 333333322222 22222222 2333343333322122 24555442222346789999964 21
Q ss_pred CCCCCChh-----hhHHHHHHhhhhhHHHhhhc--CCCeEEeecccccCC
Q 013777 341 NFNGLNVQ-----QNIDYVNNQRASDLGAVTTS--NGPLTFVGEWTCEWN 383 (436)
Q Consensus 341 ~~~~~~~~-----~~i~~i~~~~~~~~~~~~~~--~~p~v~vGEwg~~~~ 383 (436)
.-.....+ ..++.+.... +.+..+.+. .+.+++|||-|.+++
T Consensus 250 g~d~~l~~~~l~p~~Ld~~~~~~-~~~~~~v~~~~p~~~~WlGEtg~Ay~ 298 (319)
T PF03662_consen 250 GRDPALIEDFLNPSYLDTLADTF-QKLQQVVQEYGPGKPVWLGETGSAYN 298 (319)
T ss_dssp TT-TT-HHHHTS--HHHHHHHHH-HHHH-----HHH---EEEEEEEEEST
T ss_pred CchHHHHHHhcChhhhhHHHHHH-HHHhhhhcccCCCCCeEEeCcccccC
Confidence 11111111 1223332221 122222222 234699999998775
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A. |
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.24 Score=54.81 Aligned_cols=145 Identities=17% Similarity=0.234 Sum_probs=80.8
Q ss_pred HHHHHHHHhCCCCEEEe-cCcccc-----ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC--
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWI-----ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ-- 225 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~-----~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q-- 225 (436)
++-+..|+++|+|+|=| ||.-.. ..++.. +++- =+..+.|.++|+.|.++||+||||+ |..+...
T Consensus 269 ~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~-~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~ 347 (726)
T PRK05402 269 DQLIPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTSR-FGTPDDFRYFVDACHQAGIGVILDWVPAHFPKDAHGL 347 (726)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCcc-cCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccch
Confidence 44468999999999988 552100 111111 1111 1468899999999999999999997 5433210
Q ss_pred CC------CCCCCCC-CCCCCCC--------hhHHHHHHHHHHHHHHHhCCCCceeEEEee-cC---------------C
Q 013777 226 NG------NEHSATR-DGFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELI-NE---------------P 274 (436)
Q Consensus 226 ng------~~~sg~~-~~~~~w~--------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~-NE---------------P 274 (436)
.. +.+.... .....|. +..++..++..+...++|.=+- +-+|.+ +. +
T Consensus 348 ~~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e~~iDG--~R~D~v~~~~~~~~~~~~g~~~~~~ 425 (726)
T PRK05402 348 ARFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEEFHIDG--LRVDAVASMLYLDYSRKEGEWIPNI 425 (726)
T ss_pred hccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHHhCCcE--EEECCHHHhhhcccccccccccccc
Confidence 00 0111000 1122342 4445556666666666664221 112211 22 1
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 275 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
.. +.....-..+.+++.+.||+..|+.++|-+.
T Consensus 426 ~~-~~~~~~~~~fl~~~~~~~~~~~p~~~liaE~ 458 (726)
T PRK05402 426 YG-GRENLEAIDFLRELNAVVHEEFPGALTIAEE 458 (726)
T ss_pred cc-CcCCHHHHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 11 1111234678999999999999998877763
|
|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=95.90 E-value=2.4 Score=45.98 Aligned_cols=136 Identities=16% Similarity=0.222 Sum_probs=75.3
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc-------------ccCCCC---CCC-Cc------cchHHHHHHHHHHHHHcCCEEEE
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI-------------ANDPTP---PKP-FV------GGSSKVLDNAFDWAEKYGVKVIV 216 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~-------------~~~~~~---~~~-~~------~~~l~~ld~~v~~a~~~Gi~Vil 216 (436)
+-++.|+++|+|+|=| ||.-.. ..++.. +++ |. .+..+.|+++|+.|.++||+|||
T Consensus 168 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~~~~~~~~~wGY~~~~y~~~~~~y~~~p~~~~~~~~efk~lV~~~H~~Gi~Vil 247 (605)
T TIGR02104 168 TGLDYLKELGVTHVQLLPVFDFAGVDEEDPNNAYNWGYDPLNYNVPEGSYSTNPYDPATRIRELKQMIQALHENGIRVIM 247 (605)
T ss_pred hHHHHHHHcCCCEEEeCCcccccccccccCCCCCCCCCCCccCCCcChhhhcCCCccchHHHHHHHHHHHHHHCCCEEEE
Confidence 4589999999999988 553110 111110 000 11 11368899999999999999999
Q ss_pred Ec---CCCCCCCCCCC-----------CCCCCCCCCCCC-------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 217 DL---HAAPGSQNGNE-----------HSATRDGFQEWG-------DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 217 Dl---H~~pg~qng~~-----------~sg~~~~~~~w~-------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
|+ |...+..+.+. ..|.......|. +..++..++.++..++.|+=+ .+ =+|++..-
T Consensus 248 DvV~NH~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~v~~~i~~~~~~W~~e~~iD-Gf-R~D~~~~~- 324 (605)
T TIGR02104 248 DVVYNHTYSREESPFEKTVPGYYYRYNEDGTLSNGTGVGNDTASEREMMRKFIVDSVLYWVKEYNID-GF-RFDLMGIH- 324 (605)
T ss_pred EEEcCCccCCCCCcccCCCCCeeEEECCCCCccCCCcccCCcccCCHHHHHHHHHHHHHHHHHcCCC-EE-EEechhcC-
Confidence 97 54321111111 001000001111 344455566666666666322 22 25656332
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 276 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+ ..+.+++.++|++..|+.+++-+
T Consensus 325 ----~----~~~~~~~~~~~~~~~p~~~ligE 348 (605)
T TIGR02104 325 ----D----IETMNEIRKALNKIDPNILLYGE 348 (605)
T ss_pred ----C----HHHHHHHHHHHHhhCCCeEEEEc
Confidence 2 23566778888999998776654
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.42 Score=53.11 Aligned_cols=148 Identities=16% Similarity=0.179 Sum_probs=83.3
Q ss_pred CHHHHHHHHhCCCCEEEe-cCcc------ccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC
Q 013777 159 TDEDFKFLSSNGINAVRI-PVGW------WIANDPT---PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ 225 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRi-pv~~------~~~~~~~---~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q 225 (436)
+++-+..|+++|+|+|=| ||.- | ..++. .+++- =+..+.|+.+|+.|.++||+||||+ |..+...
T Consensus 419 ~e~~LdYLk~LGvt~IeLmPv~e~~~~~sw-GY~~~~yfa~~~~-yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d~~ 496 (897)
T PLN02960 419 TQKVLPHVKKAGYNAIQLIGVQEHKDYSSV-GYKVTNFFAVSSR-FGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEM 496 (897)
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCC-CCCcccCCCcccc-cCCHHHHHHHHHHHHHCCCEEEEEecccccCCccc
Confidence 355699999999999998 5521 1 01111 11111 1457899999999999999999997 5544321
Q ss_pred CC----------CCCCCCCCCCCCCC--------hhHHHHHHHHHHHHHHHhCCC-------CceeEEE--eecCCCC--
Q 013777 226 NG----------NEHSATRDGFQEWG--------DSNVADTVAVIDFLAARYANR-------PSLAAIE--LINEPLA-- 276 (436)
Q Consensus 226 ng----------~~~sg~~~~~~~w~--------~~~~~~~~~~~~~lA~ry~~~-------~~v~g~e--L~NEP~~-- 276 (436)
++ +.+.+.......|. +..++..++......+.|.=+ .+++-.+ ...++..
T Consensus 497 ~~L~~FDG~~~~Yf~~~~~g~~~~WG~~~fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~~~ 576 (897)
T PLN02960 497 VGLSLFDGSNDCYFHSGKRGHHKRWGTRMFKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGDLD 576 (897)
T ss_pred cchhhcCCCccceeecCCCCccCCCCCcccCCCCHHHHHHHHHHHHHHHHHHCCCceeecccceeeeeccCccccCCccc
Confidence 11 11111111123344 334455566666666666432 1222111 0111110
Q ss_pred ---CCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 277 ---PGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 277 ---~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
.......-..|++.+-..|++..|+.++|.++
T Consensus 577 ~~~n~~~d~~Ai~fL~~lN~~v~~~~P~vilIAEd 611 (897)
T PLN02960 577 EYCNQYVDRDALIYLILANEMLHQLHPNIITIAED 611 (897)
T ss_pred ccCCccCCchHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 00112345678888899999999999888874
|
|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.43 Score=51.63 Aligned_cols=59 Identities=15% Similarity=0.231 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCCCEEEe-cCccccccCCCCCCCC---cc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWIANDPTPPKPF---VG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~~~~~~~~~~~---~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+-++.|+++|+|+|=| ||.--..........| ++ |..+.|+++|+.|+++||+||||+
T Consensus 182 ~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~ 246 (598)
T PRK10785 182 SEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDG 246 (598)
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35589999999999998 4421000000001111 11 468999999999999999999998
|
|
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.081 Score=57.57 Aligned_cols=68 Identities=25% Similarity=0.419 Sum_probs=47.3
Q ss_pred hcCCHHHHHHHHhCCCCEEEe-cCccccccC--------------CC---CCC-CCc-----cchHHHHHHHHHHHHHcC
Q 013777 156 SYITDEDFKFLSSNGINAVRI-PVGWWIAND--------------PT---PPK-PFV-----GGSSKVLDNAFDWAEKYG 211 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRi-pv~~~~~~~--------------~~---~~~-~~~-----~~~l~~ld~~v~~a~~~G 211 (436)
....+..|+.|+++|+++|.| ||..+...+ |. .|+ .|. .+....|+.+|+.+.++|
T Consensus 199 gl~~~~~i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP~~fFAp~~~Yss~p~p~~~i~EfK~mV~~lHkaG 278 (697)
T COG1523 199 GLAEPVIIDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDPLNFFAPEGRYASNPEPATRIKEFKDMVKALHKAG 278 (697)
T ss_pred hhccccHHHHHHHhCCceEEEecceEEeccccccccccccccCCCcccccCCCccccCCCCcchHHHHHHHHHHHHHHcC
Confidence 334456699999999999998 775432211 10 001 121 236889999999999999
Q ss_pred CEEEEEc---CCCCC
Q 013777 212 VKVIVDL---HAAPG 223 (436)
Q Consensus 212 i~VilDl---H~~pg 223 (436)
|.||||+ |.+.|
T Consensus 279 I~VILDVVfNHTae~ 293 (697)
T COG1523 279 IEVILDVVFNHTAEG 293 (697)
T ss_pred CEEEEEEeccCcccc
Confidence 9999998 77543
|
|
| >PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate [] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.046 Score=53.97 Aligned_cols=170 Identities=19% Similarity=0.216 Sum_probs=88.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccc-----c--------------CCC------------CCCCC----ccchHHHHHHHH
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIA-----N--------------DPT------------PPKPF----VGGSSKVLDNAF 204 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~-----~--------------~~~------------~~~~~----~~~~l~~ld~~v 204 (436)
|+.|+.||=.|+|.+=-+++-... . .|. =++|. .+...+.=.+++
T Consensus 22 EreIDWMALnGiNl~La~~GqEavw~~v~~~~G~t~~ei~~ff~GPA~laW~rMgNl~gwgGPLp~~w~~~q~~Lq~kIl 101 (333)
T PF05089_consen 22 EREIDWMALNGINLPLAIVGQEAVWQRVLRELGLTDEEIREFFTGPAFLAWWRMGNLQGWGGPLPQSWIDQQAELQKKIL 101 (333)
T ss_dssp HHHHHHHHHTT--EEE--TTHHHHHHHHHGGGT--HHHHHHHS--TT-HHHHHTTS--STT----TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhhhhhHHHHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHhCCcccCCCCCCHHHHHHHHHHHHHHH
Confidence 899999999999988776653110 0 010 01232 234566667799
Q ss_pred HHHHHcCCEEEEEcCC----------CCCC---CCCCCCCCCCCCCCCCC----hhHHHHHHHHHHHHHHHhCCCCceeE
Q 013777 205 DWAEKYGVKVIVDLHA----------APGS---QNGNEHSATRDGFQEWG----DSNVADTVAVIDFLAARYANRPSLAA 267 (436)
Q Consensus 205 ~~a~~~Gi~VilDlH~----------~pg~---qng~~~sg~~~~~~~w~----~~~~~~~~~~~~~lA~ry~~~~~v~g 267 (436)
+..++.||..||=-.. .|.. .-+.++.-.+ +.|- +...+-...+++...+.|. ...+.+
T Consensus 102 ~RmreLGm~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~~f~~---~~~L~P~dplF~~i~~~F~~~q~~~yG-~~~~Y~ 177 (333)
T PF05089_consen 102 DRMRELGMTPVLPAFAGHVPRAFKRKYPNANITRQGNWNGFCR---PYFLDPTDPLFAEIAKLFYEEQIKLYG-TDHIYA 177 (333)
T ss_dssp HHHHHHT-EEEEE--S-EE-TTHHHHSTT--EE---EETTEE-----EEE-SS--HHHHHHHHHHHHHHHHH----SEEE
T ss_pred HHHHHcCCcccCCCcCCCCChHHHhcCCCCEEeeCCCcCCCCC---CceeCCCCchHHHHHHHHHHHHHHhcC-CCceeC
Confidence 9999999999994321 0111 0000100000 0111 2344555678888889998 778999
Q ss_pred EEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC------C-CCCCChhhhhccCCCCCcEEEEEe
Q 013777 268 IELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN------R-LGPADHKELLSFASGLSRVVIDVH 333 (436)
Q Consensus 268 ~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~------~-~~~~~~~~~~~~~~~~~nvv~~~H 333 (436)
.|+.||-..+....+.+.+..+.+++++++.+|+++-++.+ . |.......++.-.+...-+|+|..
T Consensus 178 ~D~FnE~~p~~~~~~~l~~~s~~v~~am~~~dp~AvWvmQgWlF~~~~fW~~~~~~a~L~~Vp~~~mliLDL~ 250 (333)
T PF05089_consen 178 ADPFNEGGPPSGDPEYLANVSKAVYKAMQAADPDAVWVMQGWLFYYDPFWTPNPIKALLSGVPKGRMLILDLF 250 (333)
T ss_dssp --TTTTS---TTS---HHHHHHHHHHHHHHH-TT-EEEEEE--------BTTBS-HHHHTT-SGGGEEEEETT
T ss_pred CCccCCCCCCCCchHHHHHHHHHHHHHHHhhCCCcEEEEcccccccccccCcchHHHHHcCCCCCCeEEEEcc
Confidence 99999977655666779999999999999999998766653 1 322222444443334455677654
|
Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A. |
| >KOG3962 consensus Predicted actin-bundling protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.051 Score=49.97 Aligned_cols=92 Identities=18% Similarity=0.266 Sum_probs=73.5
Q ss_pred ccccEEEEecCCCceEEEcCCC---CCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEE
Q 013777 4 KFQKYIAAESGGGTIVVANRTS---ASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVR 80 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~---~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~ 80 (436)
.-|.||-|+--|..-|-+--.. ..+=|.|.+..+++++++|++-=|+|++++. .+.|++.+.++|+-|.|..|-
T Consensus 55 ~~~~yl~a~dng~ft~g~ph~~~~gp~p~e~f~avki~dsrIaLKsGyGKYlsins---dglvvg~qeAvG~~EQw~~vF 131 (246)
T KOG3962|consen 55 DDGTYLGAMDNGLFTLGAPHDEVDGPEPEEQFMAVKISDSRIALKSGYGKYLSINS---DGLVVGRQEAVGSREQWEPVF 131 (246)
T ss_pred cCceEEEEEecCceeeccCCccccCCCchhhEEEEEccCceEEecccccceeeecC---CccEEEehhhcCcHhhchhhh
Confidence 3477887766665655554333 3467899999999999999999999999997 567999999999999998777
Q ss_pred cCCCCcceEEeccCCceEEEe
Q 013777 81 KDGDSSRVRLSASNGMFIQAI 101 (436)
Q Consensus 81 ~~~~~~~v~i~~~nG~~lq~~ 101 (436)
.. .++.+-++|+.|...+
T Consensus 132 q~---~r~a~~as~s~~~~~~ 149 (246)
T KOG3962|consen 132 QE---GRMALLASNSCFIRCN 149 (246)
T ss_pred hc---cceEEeeccceeEEec
Confidence 64 4677888888887654
|
|
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.4 Score=54.00 Aligned_cols=112 Identities=8% Similarity=0.007 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCC----CCC-----------CCCCCCCCCCCC------hhHHHHHHHH
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN----GNE-----------HSATRDGFQEWG------DSNVADTVAV 251 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qn----g~~-----------~sg~~~~~~~w~------~~~~~~~~~~ 251 (436)
....++++|+.|.++||+||||+ |...++.. ..+ ..|......-+. +...+..++.
T Consensus 464 RI~efk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld~~vP~YY~r~~~~G~~~ns~c~n~~Ase~~mvrklIlDs 543 (970)
T PLN02877 464 RIIEFRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLDKIVPGYYLRRNSDGFIENSTCVNNTASEHYMVDRLIVDD 543 (970)
T ss_pred hHHHHHHHHHHHHHCCCEEEEEECCccccCCCCcchhhcccCCCCCceEEECCCCCcccCCccCCCccCCHHHHHHHHHH
Confidence 45679999999999999999997 55322110 000 011100000000 2233455678
Q ss_pred HHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCC
Q 013777 252 IDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 311 (436)
Q Consensus 252 ~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~ 311 (436)
++..++.|+=+ .. =|||+..-.. .+....+...+++...++.++...+++++.+|.
T Consensus 544 l~yW~~ey~VD-GF-RFDlmg~i~~--~tm~~~~~~L~~i~~~~~~~dg~~i~lyGEgW~ 599 (970)
T PLN02877 544 LLNWAVNYKVD-GF-RFDLMGHLMK--RTMVRAKDALQSLTLERDGVDGSSIYLYGEGWD 599 (970)
T ss_pred HHHHHHHhCCC-EE-EEEccccccH--HHHHHHHHHHHHHhhhhcccCCCceEEEEeCCC
Confidence 88888888533 22 3788876431 111222222333322333345445666777774
|
|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.29 Score=50.70 Aligned_cols=134 Identities=18% Similarity=0.314 Sum_probs=85.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQNGNEHSATRDGF 237 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~pg~qng~~~sg~~~~~ 237 (436)
+..++.||++|+.-|=++| ||-..+...|..| .+....++++.+++.||+ |||..|..-|.- | +..+ ..-
T Consensus 120 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGGNv-G-d~~~--IpL 191 (531)
T PLN02161 120 TVSLKALKLAGVHGIAVEV-WWGIVERFSPLEF---KWSLYEELFRLISEAGLKLHVALCFHSNMHLF-G-GKGG--ISL 191 (531)
T ss_pred HHHHHHHHHcCCCEEEEEe-eeeeeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCCCC-C-CccC--ccC
Confidence 7889999999999999999 7766666556666 578888999999999997 567888754311 1 1111 122
Q ss_pred CCCChhHHHHHHHHHHHHHH----HhCC-----CCceeEEEeecCCCCCCC-ChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 238 QEWGDSNVADTVAVIDFLAA----RYAN-----RPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 238 ~~w~~~~~~~~~~~~~~lA~----ry~~-----~~~v~g~eL~NEP~~~~~-~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+.| +++...+ -|+| ++.-+.+-+=|+|...+- +.+.+.+|++..-+.....-.+.++-|.
T Consensus 192 P~W----------V~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~~~~~I~eI~ 261 (531)
T PLN02161 192 PLW----------IREIGDVNKDIYYRDKNGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYIGNVIEEIS 261 (531)
T ss_pred CHH----------HHhhhccCCCceEEcCCCCcccceeeeecccchhcCCCCHHHHHHHHHHHHHHHHHHHhcCceEEEE
Confidence 333 1111111 1333 234456777788986543 4577888888888877776545444444
Q ss_pred CCCC
Q 013777 308 NRLG 311 (436)
Q Consensus 308 ~~~~ 311 (436)
-+.|
T Consensus 262 VGlG 265 (531)
T PLN02161 262 IGLG 265 (531)
T ss_pred eccc
Confidence 3333
|
|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=95.23 E-value=1.4 Score=43.62 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=74.3
Q ss_pred HHHHHHHHhCCCCEEEecCcccc---ccCCCCCCC--C--ccchHHHHHHHHHHHHHcCCEEEEEcCCCCCC----CCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWI---ANDPTPPKP--F--VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS----QNGN 228 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~---~~~~~~~~~--~--~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~----qng~ 228 (436)
++-++.|++.|+|+|=|.|--.. ..+...+.. . ......-+..+++.++++|||+|-=+..+... .++.
T Consensus 16 ~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARIv~FkD~~la~~~pe 95 (316)
T PF13200_consen 16 DKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARIVVFKDPVLAEAHPE 95 (316)
T ss_pred HHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEEEEecChHHhhhChh
Confidence 57799999999999999874211 011111100 0 11123568999999999999999755543211 0110
Q ss_pred CC----CCC--CC-CCCCCC----hhHHHHHHHHHHHHHHH--------hCCCCc---eeEEEeecCCCCCCCChhHHHH
Q 013777 229 EH----SAT--RD-GFQEWG----DSNVADTVAVIDFLAAR--------YANRPS---LAAIELINEPLAPGVALDTLKS 286 (436)
Q Consensus 229 ~~----sg~--~~-~~~~w~----~~~~~~~~~~~~~lA~r--------y~~~~~---v~g~eL~NEP~~~~~~~~~~~~ 286 (436)
.. .|. .+ ....|- ++..+..+++.+.+|+. |-..|. .-.. ...++.......+.+..
T Consensus 96 ~av~~~~G~~w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~GFdEIqfDYIRFP~~~~~~~l-~y~~~~~~~~r~~aI~~ 174 (316)
T PF13200_consen 96 WAVKTKDGSVWRDNEGEAWVNPYSKEVWDYNIDIAKEAAKLGFDEIQFDYIRFPDEGRLSGL-DYSENDTEESRVDAITD 174 (316)
T ss_pred hEEECCCCCcccCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCCEEEeeeeecCCCCccccc-ccCCCCCcchHHHHHHH
Confidence 00 010 00 112354 34455556666666652 111222 0000 01112111113477899
Q ss_pred HHHHHHHHHHhhCCC
Q 013777 287 YYKAGYDAVRKYTST 301 (436)
Q Consensus 287 ~~~~~~~aIR~~~p~ 301 (436)
|.+.+.+.+++.+-.
T Consensus 175 Fl~~a~~~l~~~~v~ 189 (316)
T PF13200_consen 175 FLAYAREELHPYGVP 189 (316)
T ss_pred HHHHHHHHHhHcCCC
Confidence 999999999987643
|
|
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.61 Score=53.60 Aligned_cols=103 Identities=16% Similarity=0.190 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-----CCCCC----CCCCC----C-CCCCC-hhHHHHHHHHHHHHHH
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ-----NGNEH----SATRD----G-FQEWG-DSNVADTVAVIDFLAA 257 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q-----ng~~~----sg~~~----~-~~~w~-~~~~~~~~~~~~~lA~ 257 (436)
..+.|.++|+.|.++||+||||+ |....+. .++.+ .|... + ..... +..++..++.++..++
T Consensus 553 ri~EfK~LV~alH~~GI~VILDVVyNHt~~~~~f~~~~p~Yy~~~~~~G~~~~~~~g~~l~~e~~~vrk~iiDsl~yWv~ 632 (1111)
T TIGR02102 553 RIAEFKNLINEIHKRGMGVILDVVYNHTAKVYIFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHEMSRRILVDSIKYLVD 632 (1111)
T ss_pred cHHHHHHHHHHHHHCCCEEEEecccccccccccccccCCCceEeeCCCCCcccccCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 36889999999999999999997 4432210 00000 01000 0 00001 3344556677888888
Q ss_pred HhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCC
Q 013777 258 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310 (436)
Q Consensus 258 ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~ 310 (436)
.|+=+ . +=||++.. .+. .+++.+..++++.+|+.+++ +.+|
T Consensus 633 ey~VD-G-FRfDl~g~-----~d~----~~~~~~~~~l~~~dP~~~li-GE~W 673 (1111)
T TIGR02102 633 EFKVD-G-FRFDMMGD-----HDA----ASIEIAYKEAKAINPNIIMI-GEGW 673 (1111)
T ss_pred hcCCc-E-EEEecccc-----CCH----HHHHHHHHHHHHhCcCEEEE-Eecc
Confidence 77533 2 23777753 122 35566777888889976555 4444
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645). |
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.67 Score=53.74 Aligned_cols=146 Identities=21% Similarity=0.249 Sum_probs=81.6
Q ss_pred HHHHHHHHhCCCCEEEe-cCc------cccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-
Q 013777 160 DEDFKFLSSNGINAVRI-PVG------WWIANDPT---PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ- 225 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~------~~~~~~~~---~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q- 225 (436)
++-++.|+++|+|+|=| ||. .| ..++. .+++- =+..+.|.++|+.|.++||+||||+ |..+..-
T Consensus 769 ~~lldYlk~LGvt~IeLmPv~e~p~~~sw-GY~~~~y~ap~~r-yGt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~~~ 846 (1224)
T PRK14705 769 KELVDYVKWLGFTHVEFMPVAEHPFGGSW-GYQVTSYFAPTSR-FGHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDSWA 846 (1224)
T ss_pred HHHHHHHHHhCCCEEEECccccCCCCCCC-CCCccccCCcCcc-cCCHHHHHHHHHHHHHCCCEEEEEeccccCCcchhh
Confidence 45589999999999977 652 12 11211 11110 1467889999999999999999997 4322110
Q ss_pred ----CC---CCCCCCC-CCCCCCC--------hhHHHHHHHHHHHHHHHhCCCC----ceeE---EEee-----cCCCCC
Q 013777 226 ----NG---NEHSATR-DGFQEWG--------DSNVADTVAVIDFLAARYANRP----SLAA---IELI-----NEPLAP 277 (436)
Q Consensus 226 ----ng---~~~sg~~-~~~~~w~--------~~~~~~~~~~~~~lA~ry~~~~----~v~g---~eL~-----NEP~~~ 277 (436)
.+ +.|.... .....|. +..++..++...+..++|.=+- .|.. .|-- -.|...
T Consensus 847 l~~fdg~~~y~~~d~~~g~~~~Wg~~~fn~~~~eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~~ 926 (1224)
T PRK14705 847 LAQFDGQPLYEHADPALGEHPDWGTLIFDFGRTEVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNRF 926 (1224)
T ss_pred hhhcCCCcccccCCcccCCCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhccccccccccccccc
Confidence 00 1111111 1123443 3444555666677777765432 1110 0100 012211
Q ss_pred C-CChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 278 G-VALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 278 ~-~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+ .....-..|.+++...|++..|+.++|-+
T Consensus 927 gg~en~~ai~fl~~ln~~v~~~~p~~~~IAE 957 (1224)
T PRK14705 927 GGRENLEAISFLQEVNATVYKTHPGAVMIAE 957 (1224)
T ss_pred CCccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 1 11123467999999999999999888776
|
|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.048 Score=52.90 Aligned_cols=58 Identities=26% Similarity=0.400 Sum_probs=39.9
Q ss_pred HHHHHHHhCCCCEEEecCccccccC--CCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAND--PTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~--~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|-|+=-+..-.. +..+..| + =+..+.|.++|+.|.++||+||||+
T Consensus 8 ~kLdyl~~lGv~~I~l~Pi~~~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~ 72 (316)
T PF00128_consen 8 DKLDYLKDLGVNAIWLSPIFESPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDV 72 (316)
T ss_dssp HTHHHHHHHTESEEEESS-EESSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCceecccccccccccccccceeeeccccccchhhhhhhhhhccccccceEEEee
Confidence 4588999999999999532221000 0000001 1 1578999999999999999999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.48 Score=52.04 Aligned_cols=58 Identities=24% Similarity=0.506 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc--------------ccCCC---CCCC-Ccc-chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI--------------ANDPT---PPKP-FVG-GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~--------------~~~~~---~~~~-~~~-~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.-++.|+++|+|+|=| ||.-.. ..++. .+++ |.. +..+.|.++|+.|.++||+||||+
T Consensus 188 ~~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGYd~~~y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDv 265 (688)
T TIGR02100 188 AMIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGYNTLGFFAPEPRYLASGQVAEFKTMVRALHDAGIEVILDV 265 (688)
T ss_pred chhHHHHHcCCCEEEECCcccCCccccccccCCCCccCcCcccccccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3599999999999988 442110 11111 0111 211 357889999999999999999997
|
This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. |
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.4 Score=49.98 Aligned_cols=134 Identities=17% Similarity=0.390 Sum_probs=84.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQNGNEHSATRDGF 237 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~pg~qng~~~sg~~~~~ 237 (436)
+..++.||++|+.-|=++| ||-..+...|..| .|....++++.+++.||+ ||+..|..-| |-.+.+ ...-
T Consensus 110 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG--NVGD~~--~IpL 181 (548)
T PLN02803 110 NASLMALRSAGVEGVMVDA-WWGLVEKDGPMKY---NWEGYAELVQMVQKHGLKLQVVMSFHQCGG--NVGDSC--SIPL 181 (548)
T ss_pred HHHHHHHHHcCCCEEEEEe-eeeeeccCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCC--CCCCcc--cccC
Confidence 6789999999999999999 7766666556666 578888999999999997 5678887543 211111 1122
Q ss_pred CCCChhHHHHHHHHHHHHHH----HhCC-----CCceeEEEeecCCCCCCC-ChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 238 QEWGDSNVADTVAVIDFLAA----RYAN-----RPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 238 ~~w~~~~~~~~~~~~~~lA~----ry~~-----~~~v~g~eL~NEP~~~~~-~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+.| +++...+ -|+| +..-+.+-+=|+|...+- +.+.+.+|++..-+.....-.+.++-|.
T Consensus 182 P~W----------V~e~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~~~I~eI~ 251 (548)
T PLN02803 182 PPW----------VLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLGGVIAEIQ 251 (548)
T ss_pred CHH----------HHHhhhcCCCceEecCCCCcccceeccccccchhccCCCHHHHHHHHHHHHHHHHHHHhcCceEEEE
Confidence 333 1221111 1333 223445666788876543 4477888888877777775545544444
Q ss_pred CCCC
Q 013777 308 NRLG 311 (436)
Q Consensus 308 ~~~~ 311 (436)
-+.|
T Consensus 252 VGlG 255 (548)
T PLN02803 252 VGMG 255 (548)
T ss_pred eccc
Confidence 3343
|
|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=1.4 Score=48.62 Aligned_cols=144 Identities=17% Similarity=0.250 Sum_probs=80.9
Q ss_pred HHHHHHHHhCCCCEEEe-cCc------cccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-
Q 013777 160 DEDFKFLSSNGINAVRI-PVG------WWIANDPT---PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ- 225 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~------~~~~~~~~---~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q- 225 (436)
++-+..|+++|+|+|=| |+. .|- .++. .+.+- -+..+.|.++|+.|.++||+||||+ |..+...
T Consensus 273 ~~ll~ylk~LGvt~I~LmPi~e~~~~~~wG-Y~~~~~~a~~~~-~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~~ 350 (730)
T PRK12568 273 EQLIPYVQQLGFTHIELLPITEHPFGGSWG-YQPLGLYAPTAR-HGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHG 350 (730)
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCC-CCCCcCCccCcc-cCCHHHHHHHHHHHHHCCCEEEEEeccccCCccccc
Confidence 56689999999999987 552 121 1111 11111 1467899999999999999999997 4332110
Q ss_pred -CCC------CCCCCCCC-CCCCC--------hhHHHHHHHHHHHHHHHhCCCC-------ceeEEE--------eecCC
Q 013777 226 -NGN------EHSATRDG-FQEWG--------DSNVADTVAVIDFLAARYANRP-------SLAAIE--------LINEP 274 (436)
Q Consensus 226 -ng~------~~sg~~~~-~~~w~--------~~~~~~~~~~~~~lA~ry~~~~-------~v~g~e--------L~NEP 274 (436)
..+ .+...+.+ ...|. +..++..++......+.|.=+- .++-.+ +-|+-
T Consensus 351 l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~ 430 (730)
T PRK12568 351 LAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAH 430 (730)
T ss_pred cccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhcccccccccccccc
Confidence 001 11111111 22343 3445555666666666654221 111011 11221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 275 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
. +.....-..|.+++-.+|++..|+.++|-+
T Consensus 431 g--g~en~ea~~Fl~~ln~~v~~~~P~~~~IAE 461 (730)
T PRK12568 431 G--GRENLEAVAFLRQLNREIASQFPGVLTIAE 461 (730)
T ss_pred C--CccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 1 111123467999999999999999988876
|
|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.57 Score=40.31 Aligned_cols=98 Identities=16% Similarity=0.249 Sum_probs=59.3
Q ss_pred HHHHHHHHhCCCCEEEecCc---cccccCCC--CCCCCccchHHHHHHHHHHHHHcCCEEEEEc--CCC-------CC--
Q 013777 160 DEDFKFLSSNGINAVRIPVG---WWIANDPT--PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL--HAA-------PG-- 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~---~~~~~~~~--~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl--H~~-------pg-- 223 (436)
++-++.+++.|+|+|-|... -+.+.+.. +..|+.. .+.|.++|+.|++.||+|++=+ +.. |.
T Consensus 3 ~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~--~Dllge~v~a~h~~Girv~ay~~~~~d~~~~~~HPeW~ 80 (132)
T PF14871_consen 3 EQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLK--RDLLGEQVEACHERGIRVPAYFDFSWDEDAAERHPEWF 80 (132)
T ss_pred HHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCC--cCHHHHHHHHHHHCCCEEEEEEeeecChHHHHhCCcee
Confidence 45578899999999999553 12222211 1223333 5889999999999999999833 211 11
Q ss_pred --CCCCCCCCCCCCCCCCCC-----hhHHHHHHHHHHHHHHHh
Q 013777 224 --SQNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLAARY 259 (436)
Q Consensus 224 --~qng~~~sg~~~~~~~w~-----~~~~~~~~~~~~~lA~ry 259 (436)
..+|....+.....+.|. ..+.+..++.++.+.++|
T Consensus 81 ~~~~~G~~~~~~~~~~~~~~~~c~ns~Y~e~~~~~i~Ei~~~y 123 (132)
T PF14871_consen 81 VRDADGRPMRGERFGYPGWYTCCLNSPYREFLLEQIREILDRY 123 (132)
T ss_pred eECCCCCCcCCCCcCCCCceecCCCccHHHHHHHHHHHHHHcC
Confidence 011111111111222343 456788888999999999
|
|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.39 Score=49.77 Aligned_cols=59 Identities=24% Similarity=0.601 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAP 222 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~p 222 (436)
+..++.||++|+.-|=++| ||-..+...|..| .+...+++++.+++.||+ ||+..|..-
T Consensus 40 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCG 100 (517)
T PLN02801 40 EKQLKRLKEAGVDGVMVDV-WWGIVESKGPKQY---DWSAYRSLFELVQSFGLKIQAIMSFHQCG 100 (517)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEecccC
Confidence 6889999999999999999 6766665555566 578888999999999997 577889643
|
|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.38 Score=50.29 Aligned_cols=59 Identities=19% Similarity=0.480 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAP 222 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~p 222 (436)
+..++.||++|+.-|=++| ||-..+...|..| .|....++++.+++.||+ ||+..|..-
T Consensus 130 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~p~~Y---dWsgY~~L~~mvr~~GLKlq~VmSFHqCG 190 (573)
T PLN00197 130 KASLQALKSAGVEGIMMDV-WWGLVERESPGVY---NWGGYNELLEMAKRHGLKVQAVMSFHQCG 190 (573)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccC
Confidence 6889999999999999999 7766666556666 578888999999999997 567888643
|
|
| >PF07468 Agglutinin: Agglutinin; InterPro: IPR008998 Agglutinins are sugar-specific lectins that can agglutinate erythrocytes and other cell types | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.57 Score=40.94 Aligned_cols=96 Identities=18% Similarity=0.204 Sum_probs=64.7
Q ss_pred ccccEEEEecCCCc---eEEEcCCC-CCCcceEEEEE--ecCCeEEEEEe-CCceEEeecCCCCceEEEEecCCC-----
Q 013777 4 KFQKYIAAESGGGT---IVVANRTS-ASGWETFRLWR--VNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAG----- 71 (436)
Q Consensus 4 ~~~~~~~a~~~g~~---~~~anr~~-~~~we~f~~~~--~~~~~~~~~~~-~~~~~~~~~~g~~~~~~a~~~~~~----- 71 (436)
-|||||++-..+.. -|--+-+. ..++-.|++.. ..+|.+.+|.. +++|.-... +++-=|.|.++.|.
T Consensus 13 ~N~kYLry~~e~~~~~~~LqF~~edi~dP~v~fev~~~~~~dG~V~Ir~~y~nKfWrr~s-~n~~WI~ada~~p~ed~s~ 91 (153)
T PF07468_consen 13 DNGKYLRYRTEDIQQYGYLQFSGEDIGDPYVKFEVEPSKTHDGLVHIRCCYNNKFWRRSS-PNDYWIWADADDPDEDQSK 91 (153)
T ss_dssp TTS-EEEEEESSCTTCCEEEEEESSTT-CCG-EEEEE-SSTTT-EEEEETTTTEEEEESC-CC--BEEEEESSHHH-TCS
T ss_pred CCCcEEEEEecccccceeEEecCCcCCCCceeEEEEEcccCCCeEEEEeccCCceeEeCC-CCCcEEEecCCCcccccCC
Confidence 58999999773222 24344444 45999999999 77999999998 999999744 22336899888775
Q ss_pred CCce-EEEEEcC-CCCcceEEec-cCCceEEE
Q 013777 72 YSET-FQIVRKD-GDSSRVRLSA-SNGMFIQA 100 (436)
Q Consensus 72 ~~e~-f~~~~~~-~~~~~v~i~~-~nG~~lq~ 100 (436)
+..| |+-|+-+ ++...++++- .||.|.+-
T Consensus 92 ~~cTLF~Pv~vd~~~~~~i~l~~~~n~~~~~r 123 (153)
T PF07468_consen 92 PSCTLFEPVKVDVKDFNVIALRNMQNGHFCKR 123 (153)
T ss_dssp TCGG-EEEEESCCCETTEEEEEETTTTEEEEE
T ss_pred CCceEEEEEEecCCCccEEEEEecCCceEEEE
Confidence 4777 9988754 3335677766 57888873
|
Lectins occur widely in plants, as well as some microorganisms and animal []. Agglutinin from Amaranthus caudatus (amaranthin) is a lectin from the ancient South American crop, amaranth grain. Although its biological function is unknown, it can agglutinate A, B and O red blood cells, and has a carbohydrate-binding site that is specific for the methyl-glycoside of the T-antigen found linked to serine or threonine residues of cell surface glycoproteins []. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains []. Lectin B chains from ricin and related toxins also contain beta-trefoil domain, however they are not related to agglutinin, showing little sequence similarity [].; PDB: 1JLY_B 1JLX_B. |
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.47 Score=50.10 Aligned_cols=60 Identities=17% Similarity=0.429 Sum_probs=48.9
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~pg 223 (436)
+..++.||++|+.-|=++| ||-..+...|..| .|....++++.+++.||+ |||.+|..-|
T Consensus 271 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mvr~~GLKlqvVmSFHqCGG 332 (681)
T PLN02705 271 RQELSHMKSLNVDGVVVDC-WWGIVEGWNPQKY---VWSGYRELFNIIREFKLKLQVVMAFHEYGG 332 (681)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeEeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEeeccCC
Confidence 6889999999999999999 7766666555666 578888999999999998 6778887533
|
|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
Probab=93.97 E-value=1 Score=47.86 Aligned_cols=134 Identities=16% Similarity=0.358 Sum_probs=84.6
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQNGNEHSATRDGF 237 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~pg~qng~~~sg~~~~~ 237 (436)
+..++.||++|+.-|=++| ||-..+...|..| .|....++++.+++.||+ |||.+|..-| |..+.+ ...-
T Consensus 289 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~gP~~Y---dWsgY~~L~~mvr~~GLKlqvVMSFHqCGG--NVGD~~--~IPL 360 (702)
T PLN02905 289 LKQLRILKSINVDGVKVDC-WWGIVEAHAPQEY---NWNGYKRLFQMVRELKLKLQVVMSFHECGG--NVGDDV--CIPL 360 (702)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCC--CCCCcc--cccC
Confidence 6889999999999999999 7766666556666 578888999999999997 5678887543 211111 1122
Q ss_pred CCCChhHHHHHHHHHHHHHH----HhCC-----CCceeEEEeecCCCCCC-CChhHHHHHHHHHHHHHHhhCCC-eEEEE
Q 013777 238 QEWGDSNVADTVAVIDFLAA----RYAN-----RPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYTST-AYVIM 306 (436)
Q Consensus 238 ~~w~~~~~~~~~~~~~~lA~----ry~~-----~~~v~g~eL~NEP~~~~-~~~~~~~~~~~~~~~aIR~~~p~-~~Viv 306 (436)
+.| +++...+ -|+| ++.-+.+-.=++|...+ .+.+.+.+|++..-+.....-.+ .++=|
T Consensus 361 P~W----------V~e~g~~nPDifftDrsG~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~fl~~g~I~eI 430 (702)
T PLN02905 361 PHW----------VAEIGRSNPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRVEFDEFFEDGVISMV 430 (702)
T ss_pred CHH----------HHHhhhcCCCceEecCCCCccCceeeeecccccccCCCCHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 333 1211111 1333 23445577788886533 45677888888888777775433 44334
Q ss_pred eCCCC
Q 013777 307 SNRLG 311 (436)
Q Consensus 307 ~~~~~ 311 (436)
.-+.|
T Consensus 431 ~VGLG 435 (702)
T PLN02905 431 EVGLG 435 (702)
T ss_pred EeccC
Confidence 33333
|
|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=93.95 E-value=2.3 Score=46.36 Aligned_cols=144 Identities=15% Similarity=0.196 Sum_probs=79.7
Q ss_pred HHHHHHHHhCCCCEEEe-cCc------cccccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI-PVG------WWIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN 226 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~------~~~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qn 226 (436)
+.-+..|+++|+|+|=| |+. .| ..++.. +.+- =+..+.|.++|+.|.++||+||||+ |..+. .+
T Consensus 171 ~~l~~ylk~lG~t~velmPv~e~~~~~~w-GY~~~~~~~~~~~-~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~-~~ 247 (639)
T PRK14706 171 HRLGEYVTYMGYTHVELLGVMEHPFDGSW-GYQVTGYYAPTSR-LGTPEDFKYLVNHLHGLGIGVILDWVPGHFPTD-ES 247 (639)
T ss_pred HHHHHHHHHcCCCEEEccchhcCCCCCCC-CcCcccccccccc-cCCHHHHHHHHHHHHHCCCEEEEEecccccCcc-hh
Confidence 44468899999999987 552 12 111110 1110 1467899999999999999999997 43332 11
Q ss_pred CC---C------CCCCCCC-CCCCC--------hhHHHHHHHHHHHHHHHhCCCC-------ceeEEE------eecCCC
Q 013777 227 GN---E------HSATRDG-FQEWG--------DSNVADTVAVIDFLAARYANRP-------SLAAIE------LINEPL 275 (436)
Q Consensus 227 g~---~------~sg~~~~-~~~w~--------~~~~~~~~~~~~~lA~ry~~~~-------~v~g~e------L~NEP~ 275 (436)
+. + +.....+ ...|. +..++..++..+...+.|.=+- .++-.+ +-|+..
T Consensus 248 ~l~~~dg~~~y~~~~~~~g~~~~w~~~~~~~~~~eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~g 327 (639)
T PRK14706 248 GLAHFDGGPLYEYADPRKGYHYDWNTYIFDYGRNEVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIHG 327 (639)
T ss_pred hhhccCCCcceeccCCcCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCcccccccccC
Confidence 11 0 0000001 12333 3445555666666666664321 111011 111111
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 276 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
+.....-..+.+.+-.+||+..|+.++|.+.
T Consensus 328 --g~~n~~a~~fl~~ln~~v~~~~p~~~~iAE~ 358 (639)
T PRK14706 328 --GRENLEAIAFLKRLNEVTHHMAPGCMMIAEE 358 (639)
T ss_pred --CcccHHHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 1112345678999999999999998777763
|
|
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.43 Score=38.94 Aligned_cols=78 Identities=13% Similarity=0.288 Sum_probs=53.6
Q ss_pred CCcccccEEEEecCC---CceEEEcCCCCCCcceEEEEEecCCeEEEEEe-CCceEEeecCCC--CceEEEEec-CCCCC
Q 013777 1 MSTKFQKYIAAESGG---GTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQ--GNGLVAVSN-TAGYS 73 (436)
Q Consensus 1 ~s~~~~~~~~a~~~g---~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~-~~~~~~~~~~g~--~~~~~a~~~-~~~~~ 73 (436)
+++..|+||.+..++ |+.|+.-......-..|+|.+.++++|.|+.. .++.+.+.+++- |..|+--.. .-+..
T Consensus 20 ~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~~~~~~g~~v~~~~~~~~~~~ 99 (105)
T PF14200_consen 20 RNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIEPVGDGYYRIRNKNSGKVLDVAGGSTANGTNVQQWEYDNGSDN 99 (105)
T ss_dssp EETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEEESTTSEEEEEETSTTEEEEEGGGSSSTTEBEEEEE-STSSGG
T ss_pred EECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEEEecCCeEEEEECCCCcEEEECCCCCCCCCEEEEEeCCCCCcc
Confidence 356789999998874 66776655555899999999999999999998 577887765211 223443332 44555
Q ss_pred ceEEE
Q 013777 74 ETFQI 78 (436)
Q Consensus 74 e~f~~ 78 (436)
..|.|
T Consensus 100 Q~W~l 104 (105)
T PF14200_consen 100 QQWKL 104 (105)
T ss_dssp GEEEE
T ss_pred CEEEe
Confidence 55554
|
... |
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.4 Score=50.14 Aligned_cols=150 Identities=19% Similarity=0.220 Sum_probs=91.5
Q ss_pred CHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013777 159 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~ 238 (436)
++--++-.++.|+|++|+ |- ++-|. =|.+-+.|.+.||-|.-|+.-+-.- ....
T Consensus 359 ~~~LL~Sv~e~~MN~lRV----WG------GGvYE------sd~FY~lad~lGilVWQD~MFACAl---------YPt~- 412 (867)
T KOG2230|consen 359 TEFLLDSVAEVGMNMLRV----WG------GGVYE------SDYFYQLADSLGILVWQDMMFACAL---------YPTN- 412 (867)
T ss_pred HHHHHHHHHHhCcceEEE----ec------Ccccc------chhHHHHhhhccceehhhhHHHhhc---------ccCc-
Confidence 455567789999999998 41 12332 3556678999999999888743211 0000
Q ss_pred CCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-------------CCChhHHHHHHHHHHHHHH-hhCCCeEE
Q 013777 239 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-------------GVALDTLKSYYKAGYDAVR-KYTSTAYV 304 (436)
Q Consensus 239 ~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-------------~~~~~~~~~~~~~~~~aIR-~~~p~~~V 304 (436)
+...+...+-.+.=+.|.+.+|.|+.|---||-... ....+...-+|++.+..+. ..++..+.
T Consensus 413 ---~eFl~sv~eEV~yn~~Rls~HpSviIfsgNNENEaAl~~nWy~~sf~~~~~~~kdyvlly~~~i~el~l~~~~srPf 489 (867)
T KOG2230|consen 413 ---DEFLSSVREEVRYNAMRLSHHPSVIIFSGNNENEAALVQNWYGTSFERDRFESKDYVLLYANVIHELKLVSHSSRPF 489 (867)
T ss_pred ---HHHHHHHHHHHHHHHHhhccCCeEEEEeCCCccHHHHHhhhhcccccccchhhhhhhHHHHHHHHHHHhhcCCCCCc
Confidence 233444455566677899999999999999996531 1122345556666444443 44566776
Q ss_pred EEeC-CCCC-CChhhhhccCCCCCcEEEEEeecCcC
Q 013777 305 IMSN-RLGP-ADHKELLSFASGLSRVVIDVHYYNLF 338 (436)
Q Consensus 305 iv~~-~~~~-~~~~~~~~~~~~~~nvv~~~H~Y~~~ 338 (436)
|++. ..|. ..+..+... .+.+|--=|+|+|.-+
T Consensus 490 i~SSPsNG~ete~e~~VS~-NP~dn~~GDVHfYdy~ 524 (867)
T KOG2230|consen 490 IVSSPSNGKETEPENYVSS-NPQDNQNGDVHFYDYT 524 (867)
T ss_pred eecCCCCCcccCccccccC-CCccccCCceEeeehh
Confidence 6663 2221 122333332 4566777799999754
|
|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.26 Score=50.97 Aligned_cols=59 Identities=20% Similarity=0.204 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCCEEEecCcccccc----CCCCCCCCc---cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIAN----DPTPPKPFV---GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~----~~~~~~~~~---~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+.+..|+++|+++|=||=.+.... ++...-..+ =|..+.|+++|+.|+++||+||+|+
T Consensus 47 ~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDv 112 (428)
T PLN00196 47 MGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADI 112 (428)
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5668999999999999975432110 110000011 1467889999999999999999997
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.39 Score=51.21 Aligned_cols=57 Identities=23% Similarity=0.380 Sum_probs=44.4
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCc-cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~-~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
++-++++++.|+|+|-..|.|- ..+|.++ .|+ ++.++ |.++|..|++.||+|||-+-
T Consensus 52 ~~~i~k~k~~Gln~IqtYVfWn-~Hep~~g-~y~FsG~~D-lvkFikl~~~~GLyv~LRiG 109 (649)
T KOG0496|consen 52 PDLIKKAKAGGLNVIQTYVFWN-LHEPSPG-KYDFSGRYD-LVKFIKLIHKAGLYVILRIG 109 (649)
T ss_pred HHHHHHHHhcCCceeeeeeecc-cccCCCC-cccccchhH-HHHHHHHHHHCCeEEEecCC
Confidence 7889999999999999999775 4466554 444 44444 66679999999999999654
|
|
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.14 Score=51.80 Aligned_cols=127 Identities=19% Similarity=0.439 Sum_probs=70.6
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE--EEEcCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPGSQNGNEHSATRDGF 237 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~V--ilDlH~~pg~qng~~~sg~~~~~ 237 (436)
+..++.||++|+..|=++| ||-..+...|..| .+...+++++.+++.||++ |+..|...|.- |.+ +. ..-
T Consensus 19 ~~~L~~LK~~GV~GVmvdv-WWGiVE~~~p~~y---dWs~Y~~l~~~vr~~GLk~~~vmsfH~cGgNv-gD~-~~--IpL 90 (402)
T PF01373_consen 19 EAQLRALKSAGVDGVMVDV-WWGIVEGEGPQQY---DWSGYRELFEMVRDAGLKLQVVMSFHQCGGNV-GDD-CN--IPL 90 (402)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTGSSTTB------HHHHHHHHHHHHTT-EEEEEEE-S-BSSST-TSS-SE--B-S
T ss_pred HHHHHHHHHcCCcEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-CCc-cC--CcC
Confidence 6889999999999999999 6666666555556 5888999999999999985 66778764421 111 10 111
Q ss_pred CCCChhHHHHHHHHHHHHHH---HhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEE
Q 013777 238 QEWGDSNVADTVAVIDFLAA---RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM 306 (436)
Q Consensus 238 ~~w~~~~~~~~~~~~~~lA~---ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv 306 (436)
+.| +++...+ -|++.....--|-+. |...+.+.+.+.+|++...+..+..- ..+.-|
T Consensus 91 P~W----------v~~~~~~~di~ytd~~G~rn~E~lS-p~~~grt~~~Y~dfm~sF~~~f~~~~-~~I~~I 150 (402)
T PF01373_consen 91 PSW----------VWEIGKKDDIFYTDRSGNRNKEYLS-PVLDGRTLQCYSDFMRSFRDNFSDYL-STITEI 150 (402)
T ss_dssp -HH----------HHHHHHHSGGEEE-TTS-EEEEEE--CTBTTBCHHHHHHHHHHHHHHCHHHH-TGEEEE
T ss_pred CHH----------HHhccccCCcEEECCCCCcCcceee-cccCCchHHHHHHHHHHHHHHHHHHH-hhheEE
Confidence 222 1111111 144444333344444 65444336666777776666666554 444333
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A .... |
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=93.06 E-value=1.2 Score=44.06 Aligned_cols=146 Identities=19% Similarity=0.218 Sum_probs=82.6
Q ss_pred HHHHHHHHhCCCCEEEecCccc--cccCCCCCCC---------CccchHHHHHHHHHHHHHcCCEEEEEc----CCCCC-
Q 013777 160 DEDFKFLSSNGINAVRIPVGWW--IANDPTPPKP---------FVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPG- 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~--~~~~~~~~~~---------~~~~~l~~ld~~v~~a~~~Gi~VilDl----H~~pg- 223 (436)
++.++.|+++|||+|=+-|-.. .+. +..-.| .....++-|..+|+.|+++||.|.-=+ -..+.
T Consensus 22 ~~~l~~l~~~~~N~V~~qVr~~gda~Y-~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~~~~~~~ 100 (311)
T PF02638_consen 22 DEMLDDLKSAGFNAVFVQVRPRGDALY-PSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGFNAPDVS 100 (311)
T ss_pred HHHHHHHHHcCCCEEEEEEEeCcEEEe-cccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeecCCCchh
Confidence 5778899999999987755321 000 111111 111258899999999999999986322 10000
Q ss_pred ---CCCCC----CCCCCC------CCCCCCC----hhHHHHHHHHHHHHHHHhCCCCceeEEE--ee-------cC----
Q 013777 224 ---SQNGN----EHSATR------DGFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIE--LI-------NE---- 273 (436)
Q Consensus 224 ---~qng~----~~sg~~------~~~~~w~----~~~~~~~~~~~~~lA~ry~~~~~v~g~e--L~-------NE---- 273 (436)
.+.+. .+.+.. .+...|. |+.++..+++++.|+++|. -..|- +| .. ++
T Consensus 101 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd-vDGIh-lDdy~yp~~~~g~~~~~~~ 178 (311)
T PF02638_consen 101 HILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD-VDGIH-LDDYFYPPPSFGYDFPDVA 178 (311)
T ss_pred hhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC-CCeEE-ecccccccccCCCCCccHH
Confidence 00110 011100 0111232 6778888999999999984 22222 22 00 00
Q ss_pred ---------CCCCCCC-------hhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 274 ---------PLAPGVA-------LDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 274 ---------P~~~~~~-------~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
|.....+ .+.+..+.++++++|+++.|+..+-++.
T Consensus 179 ~y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~~ik~~kP~v~~sisp 229 (311)
T PF02638_consen 179 AYEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYDAIKAIKPWVKFSISP 229 (311)
T ss_pred HHHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 1100011 2345678999999999999998887763
|
|
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.34 Score=49.66 Aligned_cols=64 Identities=17% Similarity=0.374 Sum_probs=44.7
Q ss_pred hhhhcCCHHHHHHHHhCCCCEEEecCcccccc-CCCCCCC-C--cc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIAN-DPTPPKP-F--VG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 153 h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~-~~~~~~~-~--~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
||..- ++.++.|+++|+++|=||=.+.... ....+.. | ++ +..+.|+++|+.|+++||+||+|+
T Consensus 27 ~w~~i--~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 27 WWRNL--EGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHHH--HHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 56443 5668899999999999976542211 0011111 1 11 468899999999999999999998
|
|
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=92.40 E-value=1.6 Score=43.86 Aligned_cols=136 Identities=17% Similarity=0.191 Sum_probs=77.7
Q ss_pred CHHHHHHHHhCCCCEEEecC----ccccccCCCCCCCCc----cchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 159 TDEDFKFLSSNGINAVRIPV----GWWIANDPTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRipv----~~~~~~~~~~~~~~~----~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
+++-++.++++|+..|=|-- +|-++ |....+|. ...-+.+.++++.|+++||++.|-+|...-.......
T Consensus 93 ~dqW~~~ak~aGakY~VlTakHHDGF~LW--~S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~dw~~~~~~~ 170 (346)
T PF01120_consen 93 ADQWAKLAKDAGAKYVVLTAKHHDGFCLW--PSKYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPWDWHHPDYPP 170 (346)
T ss_dssp HHHHHHHHHHTT-SEEEEEEE-TT--BSS----TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESSSCCCTTTTS
T ss_pred HHHHHHHHHHcCCCEEEeehhhcCccccC--CCCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecchHhcCcccCC
Confidence 35668888999999987733 12111 11112232 2356899999999999999999977764211000000
Q ss_pred CCCC--CC----CCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEE
Q 013777 231 SATR--DG----FQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYV 304 (436)
Q Consensus 231 sg~~--~~----~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~V 304 (436)
.... .. ...|.+...+.+..-++.|..+| .+.++-||...... .+.+.. .+.++.||+..|+.+|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~ql~EL~~~Y--~~d~lWfDg~~~~~-----~~~~~~--~~~~~~i~~~qp~~ii 241 (346)
T PF01120_consen 171 DEEGDENGPADGPGNWQRYYNEYWLAQLRELLTRY--KPDILWFDGGWPDP-----DEDWDS--AELYNWIRKLQPDVII 241 (346)
T ss_dssp SCHCHHCC--HCCHHHHHHHHHHHHHHHHHHHHCS--TESEEEEESTTSCC-----CTHHHH--HHHHHHHHHHSTTSEE
T ss_pred CccCCcccccccchhhHhHhhhhhHHHHHHHHhCC--CcceEEecCCCCcc-----ccccCH--HHHHHHHHHhCCeEEE
Confidence 0000 00 00010112336667888899999 67777799887642 123322 8899999999997655
Q ss_pred E
Q 013777 305 I 305 (436)
Q Consensus 305 i 305 (436)
.
T Consensus 242 ~ 242 (346)
T PF01120_consen 242 N 242 (346)
T ss_dssp E
T ss_pred e
Confidence 3
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=92.31 E-value=1.1 Score=36.47 Aligned_cols=71 Identities=10% Similarity=0.268 Sum_probs=52.4
Q ss_pred eEEEEEec--CCeEEEEEe-CCceEEeecCC--CCceEEEEecCCCCCceEEEEEcCCCCcceEEecc-CCceEEEeeC
Q 013777 31 TFRLWRVN--ETFYNFRVN-NKQFIGLENQG--QGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSAS-NGMFIQAISE 103 (436)
Q Consensus 31 ~f~~~~~~--~~~~~~~~~-~~~~~~~~~~g--~~~~~~a~~~~~~~~e~f~~~~~~~~~~~v~i~~~-nG~~lq~~~~ 103 (436)
.+++..+. ++.|.|+.. .|+++.+.+.+ .|..|+.-...-.+.+.|.|++.+++ .++|+.. .|+.|.+.+.
T Consensus 4 ~W~~~~~~~~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~~~~~g--~y~I~n~~s~~~Ldv~~~ 80 (105)
T PF14200_consen 4 QWTFTPVGDSDGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIEPVGDG--YYRIRNKNSGKVLDVAGG 80 (105)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEEESTTS--EEEEEETSTTEEEEEGGG
T ss_pred EEEEEEecCCCCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEEEecCC--eEEEEECCCCcEEEECCC
Confidence 56777766 899999987 89999998632 13356666655689999999998765 3667765 4888887643
|
... |
| >PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.47 Score=44.76 Aligned_cols=60 Identities=22% Similarity=0.227 Sum_probs=37.3
Q ss_pred HHHHHHHHhCCC---CceeEEEeecCCCC----------CCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCC
Q 013777 251 VIDFLAARYANR---PSLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310 (436)
Q Consensus 251 ~~~~lA~ry~~~---~~v~g~eL~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~ 310 (436)
++..|..+|..- ..|-+|.|=|||.. ..++.+.+..-+-+..++||+.+|+..|+-...|
T Consensus 109 wV~~l~~~~g~a~~~~gvk~y~lDNEP~LW~~TH~dVHP~~~t~~El~~r~i~~AkaiK~~DP~a~v~GP~~w 181 (239)
T PF12891_consen 109 WVNYLVNKYGNASTNGGVKYYSLDNEPDLWHSTHRDVHPEPVTYDELRDRSIEYAKAIKAADPDAKVFGPVEW 181 (239)
T ss_dssp HHHHHHHHH--TTSTTS--EEEESS-GGGHHHHTTTT--S---HHHHHHHHHHHHHHHHHH-TTSEEEEEEE-
T ss_pred HHHHHHHHHhccccCCCceEEEecCchHhhcccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEeechhh
Confidence 455566666654 36788999999974 1345567777788888999999999988755433
|
; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A .... |
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.47 Score=50.77 Aligned_cols=59 Identities=14% Similarity=0.218 Sum_probs=40.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccC--CCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIAND--PTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~--~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+.++.|+++|+++|=|+=-+..... +.....| + =+.++.|+++|+.|+++||+||||+
T Consensus 30 ~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~ 95 (543)
T TIGR02403 30 IEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDM 95 (543)
T ss_pred HHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35588999999999998432221100 0000001 1 1578999999999999999999997
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.47 Score=50.83 Aligned_cols=58 Identities=19% Similarity=0.343 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEecCccccc-----cCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA-----NDPT---PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~-----~~~~---~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+.++.|+++|+++|=|+=-+..- .++. ..+|- =+..+.|+++|+.|+++||+||||+-
T Consensus 37 ~~ldyl~~lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~~-~Gt~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 37 QRLDYLQKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPT-YGTLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred HhhHHHHhCCCCEEEECCCCCCCCCCCCCCcccCCCcCcc-cCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 55899999999999883222110 0000 00110 14678999999999999999999983
|
|
| >COG3623 SgaU Putative L-xylulose-5-phosphate 3-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.85 E-value=4.2 Score=38.18 Aligned_cols=71 Identities=14% Similarity=0.256 Sum_probs=45.7
Q ss_pred ccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeec
Q 013777 193 VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 272 (436)
Q Consensus 193 ~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~N 272 (436)
.+..++.+.+++..|++.||++|- |-++.-... .+ .+...+++++-++..+.--......+++|+|.
T Consensus 91 r~~aleiM~KaI~LA~dLGIRtIQ-LAGYDVYYE--~~----------d~eT~~rFi~g~~~a~~lA~~aqV~lAvEiMD 157 (287)
T COG3623 91 RQQALEIMEKAIQLAQDLGIRTIQ-LAGYDVYYE--EA----------DEETRQRFIEGLKWAVELAARAQVMLAVEIMD 157 (287)
T ss_pred HHHHHHHHHHHHHHHHHhCceeEe-eccceeeec--cC----------CHHHHHHHHHHHHHHHHHHHhhccEEEeeecc
Confidence 356899999999999999999873 221110000 00 03667788766665433323335778999999
Q ss_pred CCCC
Q 013777 273 EPLA 276 (436)
Q Consensus 273 EP~~ 276 (436)
-|..
T Consensus 158 tpfm 161 (287)
T COG3623 158 TPFM 161 (287)
T ss_pred cHHH
Confidence 9973
|
|
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=91.82 E-value=0.4 Score=52.35 Aligned_cols=57 Identities=26% Similarity=0.564 Sum_probs=39.2
Q ss_pred HHHHHHHhCCCCEEEe-cCc---------------cccccCCC---CCCC-Ccc---chHHHHHHHHHHHHHcCCEEEEE
Q 013777 161 EDFKFLSSNGINAVRI-PVG---------------WWIANDPT---PPKP-FVG---GSSKVLDNAFDWAEKYGVKVIVD 217 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~---------------~~~~~~~~---~~~~-~~~---~~l~~ld~~v~~a~~~Gi~VilD 217 (436)
.-++.|+++|+|+|=| ||. +| ..++. .+++ |.. ..++.|+++|+.|.++||+||||
T Consensus 183 ~~LdYLk~LGvt~I~L~Pv~~~~~~~~~~~~g~~~yw-GYd~~~yfa~d~~ygt~~~~~~~efk~LV~~~H~~GI~VIlD 261 (658)
T PRK03705 183 VMIAYLKQLGITALELLPVAQFASEPRLQRMGLSNYW-GYNPLAMFALDPAYASGPETALDEFRDAVKALHKAGIEVILD 261 (658)
T ss_pred cchHHHHHcCCCEEEecCcccCCCccccccccccccc-CcccccccccccccCCCCcchHHHHHHHHHHHHHCCCEEEEE
Confidence 3499999999999988 552 11 01111 1111 211 24678999999999999999999
Q ss_pred c
Q 013777 218 L 218 (436)
Q Consensus 218 l 218 (436)
+
T Consensus 262 v 262 (658)
T PRK03705 262 V 262 (658)
T ss_pred E
Confidence 7
|
|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.46 Score=50.01 Aligned_cols=58 Identities=28% Similarity=0.275 Sum_probs=40.4
Q ss_pred HHHHHHHhCCCCEEEecCcccc-------ccCCCCC---C------CCcc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWI-------ANDPTPP---K------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~-------~~~~~~~---~------~~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+++|=|+=.+.. ..++... . ..++ |..+.|+++|+.|.++||+||+|+
T Consensus 26 ~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi~D~ 101 (479)
T PRK09441 26 ERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVYADV 101 (479)
T ss_pred HHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4489999999999999543321 1111110 0 0111 468899999999999999999998
|
|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=91.58 E-value=2.9 Score=47.16 Aligned_cols=104 Identities=16% Similarity=0.209 Sum_probs=62.5
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCC---CC-------C----CCCCCCCCCCC------hhHHHHHHHHH
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNG---NE-------H----SATRDGFQEWG------DSNVADTVAVI 252 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qng---~~-------~----sg~~~~~~~w~------~~~~~~~~~~~ 252 (436)
....|.++|+.|.++||+||||+ |...++... ++ + .|.......+. +...+..++.+
T Consensus 402 Ri~Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~~P~YY~r~~~~G~~~n~~~~~d~a~e~~~Vrk~iiDsl 481 (898)
T TIGR02103 402 RIKEFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKIVPGYYHRLNEDGGVENSTCCSNTATEHRMMAKLIVDSL 481 (898)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeecccccccCccCcccccccCcHhhEeeCCCCCeecCCCCcCCCCCCHHHHHHHHHHH
Confidence 56789999999999999999998 554432110 00 0 01000001111 33345566777
Q ss_pred HHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCC
Q 013777 253 DFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 311 (436)
Q Consensus 253 ~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~ 311 (436)
+..++.|+=+ .+ -||++..-. ..+++++.+++|+.+|+.++ ++.+|.
T Consensus 482 ~~W~~ey~VD-GF-RfDlm~~~~---------~~f~~~~~~~l~~i~pdi~l-~GEgW~ 528 (898)
T TIGR02103 482 VVWAKDYKVD-GF-RFDLMGHHP---------KAQMLAAREAIKALTPEIYF-YGEGWD 528 (898)
T ss_pred HHHHHHcCCC-EE-EEechhhCC---------HHHHHHHHHHHHHhCCCEEE-EecCCC
Confidence 7778777533 22 378886532 24667777889999997654 565664
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >PRK07379 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=91.53 E-value=2.1 Score=43.98 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=78.0
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 233 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH-~~pg~qng~~~sg~ 233 (436)
-+|++.++.|++.|+|.|=| +...+.+..- ... .....+.+.++++.+++.|+. |.+||- +.||
T Consensus 112 ~lt~e~l~~l~~~Gvnrisl--GvQS~~d~~L-~~l~R~~~~~~~~~ai~~l~~~G~~~v~~dlI~GlPg---------- 178 (400)
T PRK07379 112 TFDLEQLQGYRSLGVNRVSL--GVQAFQDELL-ALCGRSHRVKDIFAAVDLIHQAGIENFSLDLISGLPH---------- 178 (400)
T ss_pred cCCHHHHHHHHHCCCCEEEE--EcccCCHHHH-HHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC----------
Confidence 36899999999999995554 4343322100 000 123567788899999999998 778975 3443
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 234 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 234 ~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
...+.+.+.++.+.+ . +-+.|-.+.|.-||..+ -.+.+....+|..+.+.+++.+=.+
T Consensus 179 ---------qt~e~~~~tl~~~~~-l-~p~~is~y~L~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 247 (400)
T PRK07379 179 ---------QTLEDWQASLEAAIA-L-NPTHLSCYDLVLEPGTAFGKQYQPGKAPLPSDETTAAMYRLAQEILTQAGYEH 247 (400)
T ss_pred ---------CCHHHHHHHHHHHHc-C-CCCEEEEecceecCCchhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHcCCce
Confidence 223444445555443 2 23466667888888742 1234566678888888888887655
Q ss_pred E
Q 013777 303 Y 303 (436)
Q Consensus 303 ~ 303 (436)
+
T Consensus 248 y 248 (400)
T PRK07379 248 Y 248 (400)
T ss_pred e
Confidence 4
|
|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.59 Score=49.96 Aligned_cols=58 Identities=21% Similarity=0.297 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCCEEEecCcccccc--CCCCCCCC---cc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAN--DPTPPKPF---VG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~--~~~~~~~~---~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|=|+=-+.... .+.....| ++ +..+.|+++|+.|+++||+||||+
T Consensus 32 ~~Ldyl~~LGv~~i~L~Pi~~~~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~ 96 (539)
T TIGR02456 32 SKLDYLKWLGVDALWLLPFFQSPLRDDGYDVSDYRAILPEFGTIDDFKDFVDEAHARGMRVIIDL 96 (539)
T ss_pred HhHHHHHHCCCCEEEECCCcCCCCCCCCCCcccccccChhhCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 448999999999999842221100 00000011 11 467999999999999999999997
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >PRK05628 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=91.04 E-value=2.8 Score=42.55 Aligned_cols=123 Identities=20% Similarity=0.118 Sum_probs=77.2
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 233 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH-~~pg~qng~~~sg~ 233 (436)
.++++.++.|+++|+|.|-|++ ..+.+.. -..+ .....+.+.++++.+++.|+. |.+|+- +.||
T Consensus 105 ~i~~e~l~~l~~~G~~rvslGv--QS~~~~~-L~~l~R~~s~~~~~~a~~~l~~~g~~~v~~dli~GlPg---------- 171 (375)
T PRK05628 105 STSPEFFAALRAAGFTRVSLGM--QSAAPHV-LAVLDRTHTPGRAVAAAREARAAGFEHVNLDLIYGTPG---------- 171 (375)
T ss_pred CCCHHHHHHHHHcCCCEEEEec--ccCCHHH-HHHcCCCCCHHHHHHHHHHHHHcCCCcEEEEEeccCCC----------
Confidence 4789999999999999777665 3222110 0001 112567788899999999998 989975 3443
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 234 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 234 ~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
.+.+.+.+.++.+.+ ++ -..|..+.|.=||..+ ..+.+.....+..+.+..++.+-.+
T Consensus 172 ---------qt~~~~~~tl~~~~~-l~-~~~i~~y~l~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 240 (375)
T PRK05628 172 ---------ESDDDWRASLDAALE-AG-VDHVSAYALIVEDGTALARRVRRGELPAPDDDVLADRYELADARLSAAGFDW 240 (375)
T ss_pred ---------CCHHHHHHHHHHHHh-cC-CCEEEeeeeecCCCChHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHcCCCe
Confidence 234455555555544 22 2345456677677642 1233556778888888888877554
Q ss_pred E
Q 013777 303 Y 303 (436)
Q Consensus 303 ~ 303 (436)
+
T Consensus 241 y 241 (375)
T PRK05628 241 Y 241 (375)
T ss_pred e
Confidence 3
|
|
| >PRK05904 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=90.76 E-value=3.4 Score=41.72 Aligned_cols=126 Identities=16% Similarity=0.148 Sum_probs=78.2
Q ss_pred hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 232 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH-~~pg~qng~~~sg 232 (436)
..++++.++.|++.|+|.|=|++ ..+.+..- ... .....+.+.++++.++++|+. |-+|+- +.||
T Consensus 99 ~~lt~e~l~~lk~~G~nrisiGv--QS~~d~vL-~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dlI~GlPg--------- 166 (353)
T PRK05904 99 ELITQSQINLLKKNKVNRISLGV--QSMNNNIL-KQLNRTHTIQDSKEAINLLHKNGIYNISCDFLYCLPI--------- 166 (353)
T ss_pred CcCCHHHHHHHHHcCCCEEEEec--ccCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCcEEEEEeecCCC---------
Confidence 45789999999999999666655 32221100 000 123567788899999999997 888864 4443
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC------CCChhHHHHHHHHHHHHHHhhCCCeEEE
Q 013777 233 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------GVALDTLKSYYKAGYDAVRKYTSTAYVI 305 (436)
Q Consensus 233 ~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~------~~~~~~~~~~~~~~~~aIR~~~p~~~Vi 305 (436)
.+.+.+.+.++.+.+ .+ -+.|..+.|.=||..+ ..+.+.-.+.++.+.+.+++.+-.++=+
T Consensus 167 ----------qt~e~~~~tl~~~~~-l~-p~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~yei 233 (353)
T PRK05904 167 ----------LKLKDLDEVFNFILK-HK-INHISFYSLEIKEGSILKKYHYTIDEDKEAEQLNYIKAKFNKLNYKRYEV 233 (353)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEEEeeEecCCChHhhcCCCCChHHHHHHHHHHHHHHHHcCCcEEec
Confidence 233455555555543 22 2345556666676531 1344556677888888888887766543
|
|
| >PRK08208 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=90.71 E-value=2.1 Score=44.41 Aligned_cols=123 Identities=22% Similarity=0.261 Sum_probs=75.1
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE-EEcC-CCCCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI-VDLH-AAPGSQNGNEHSATR 234 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vi-lDlH-~~pg~qng~~~sg~~ 234 (436)
.+|++.++.|+++|+|.|-|.+ ..+.+..-..--.....+.+.++++.++++|+.+| +|+- +.|+
T Consensus 138 ~lt~e~l~~l~~~G~~rvslGv--QS~~~~~L~~l~R~~~~~~~~~ai~~l~~~g~~~i~~dlI~GlP~----------- 204 (430)
T PRK08208 138 TTTAEKLALLAARGVNRLSIGV--QSFHDSELHALHRPQKRADVHQALEWIRAAGFPILNIDLIYGIPG----------- 204 (430)
T ss_pred cCCHHHHHHHHHcCCCEEEEec--ccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC-----------
Confidence 4789999999999999777655 32221100000011256788899999999999854 7864 3343
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----CChhHHHHHHHHHHHHHHhhCCCe
Q 013777 235 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----VALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 235 ~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
.+.+.+.+.++.+.+ . +-+.|-.+.|.=||..+- .+.+....+|+.+.+...+.+=.+
T Consensus 205 --------qt~e~~~~~l~~~~~-l-~~~~is~y~L~~~~~T~l~~~~~~~~~~~~~m~~~~~~~L~~~Gy~~ 267 (430)
T PRK08208 205 --------QTHASWMESLDQALV-Y-RPEELFLYPLYVRPLTGLGRRARAWDDQRLSLYRLARDLLLEAGYTQ 267 (430)
T ss_pred --------CCHHHHHHHHHHHHh-C-CCCEEEEccccccCCCccchhcCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 233445555555543 2 224555567777776421 133566677888888887776444
|
|
| >PRK06294 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=90.50 E-value=3.7 Score=41.67 Aligned_cols=123 Identities=19% Similarity=0.194 Sum_probs=77.9
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLHA-APGSQNGNEHSAT 233 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH~-~pg~qng~~~sg~ 233 (436)
.++++.++.+++.|+|.|-|.| ..+.+..- ... .....+.+.++++.+++.|+. |-+||-. .||
T Consensus 100 ~~~~~~l~~l~~~G~nrislGv--QS~~~~~L-~~l~R~~~~~~~~~ai~~~~~~g~~~v~~Dli~GlPg---------- 166 (370)
T PRK06294 100 NLSESYIRALALTGINRISIGV--QTFDDPLL-KLLGRTHSSSKAIDAVQECSEHGFSNLSIDLIYGLPT---------- 166 (370)
T ss_pred CCCHHHHHHHHHCCCCEEEEcc--ccCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC----------
Confidence 4689999999999999666544 33322100 000 112467778899999999996 8888743 333
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 234 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 234 ~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
...+.+.+.++.+.+ ++ -+.|-.|.|.=||..+ -.+.+.....|+.+.+.+.+.+-.+
T Consensus 167 ---------qt~~~~~~~l~~~~~-l~-~~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 235 (370)
T PRK06294 167 ---------QSLSDFIVDLHQAIT-LP-ITHISLYNLTIDPHTSFYKHRKRLLPSIADEEILAEMSLAAEELLTSQGFTR 235 (370)
T ss_pred ---------CCHHHHHHHHHHHHc-cC-CCeEEEeeeEecCCChHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCCe
Confidence 234455555555554 22 3456668888888742 0234556778888888888877655
Q ss_pred E
Q 013777 303 Y 303 (436)
Q Consensus 303 ~ 303 (436)
+
T Consensus 236 y 236 (370)
T PRK06294 236 Y 236 (370)
T ss_pred e
Confidence 4
|
|
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=90.08 E-value=0.92 Score=49.71 Aligned_cols=58 Identities=21% Similarity=0.273 Sum_probs=39.3
Q ss_pred HHHHHHHhCCCCEEEecCccccc-------------------cCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA-------------------NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~-------------------~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|=|.=.+... ..+......++ +..+.|+++|+.|+++||+||||+
T Consensus 234 ~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 312 (683)
T PRK09505 234 EKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIRILFDV 312 (683)
T ss_pred HhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 44889999999999984222110 00000000111 468999999999999999999997
|
|
| >PRK08599 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=89.86 E-value=2.9 Score=42.45 Aligned_cols=123 Identities=24% Similarity=0.240 Sum_probs=75.7
Q ss_pred hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 232 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH-~~pg~qng~~~sg 232 (436)
..++++.++.|++.|+|.|=|.+ ..+.+.. -... .....+.+.++++.+++.|+. |.+|+- +.||
T Consensus 96 ~~l~~e~l~~l~~~G~~rvsiGv--qS~~~~~-l~~l~r~~~~~~~~~~i~~l~~~g~~~v~~dli~GlPg--------- 163 (377)
T PRK08599 96 GDLTKEKLQVLKDSGVNRISLGV--QTFNDEL-LKKIGRTHNEEDVYEAIANAKKAGFDNISIDLIYALPG--------- 163 (377)
T ss_pred CCCCHHHHHHHHHcCCCEEEEec--ccCCHHH-HHHcCCCCCHHHHHHHHHHHHHcCCCcEEEeeecCCCC---------
Confidence 34789999999999999666655 2221110 0000 123567888999999999997 667774 4443
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----------CChhHHHHHHHHHHHHHHhhCCC
Q 013777 233 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----------VALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 233 ~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~-----------~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
.+.+.+.+.++.+.+ .+ -+.|..+.|.-||..+- .+.+.....++.+.+.+++.+=.
T Consensus 164 ----------qt~~~~~~~l~~~~~-l~-~~~i~~y~l~~~pgT~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~Gy~ 231 (377)
T PRK08599 164 ----------QTIEDFKESLAKALA-LD-IPHYSAYSLILEPKTVFYNLMRKGKLRLPGEDLEAEMYEYLMDEMEAHGFH 231 (377)
T ss_pred ----------CCHHHHHHHHHHHHc-cC-CCEEeeeceeecCCChhHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCc
Confidence 223444455555443 22 33555677777886420 13345567788888888887754
Q ss_pred e
Q 013777 302 A 302 (436)
Q Consensus 302 ~ 302 (436)
+
T Consensus 232 ~ 232 (377)
T PRK08599 232 Q 232 (377)
T ss_pred E
Confidence 4
|
|
| >cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=89.75 E-value=14 Score=36.41 Aligned_cols=144 Identities=16% Similarity=0.214 Sum_probs=81.4
Q ss_pred HHHHHHHHhCCCCEEEecCc----cccccC--CCCC--C----CCc-cc--hHHHHHHHHHHHHHcCCEEEEEcCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVG----WWIAND--PTPP--K----PFV-GG--SSKVLDNAFDWAEKYGVKVIVDLHAAPGS 224 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~----~~~~~~--~~~~--~----~~~-~~--~l~~ld~~v~~a~~~Gi~VilDlH~~pg~ 224 (436)
++.++.|+..++|.+-+.+. |-+-.. |.-. + ++. .+ ..+.+.++++.|+++||.||..+-. ||.
T Consensus 19 k~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~yT~~di~elv~yA~~rgI~viPEiD~-PGH 97 (303)
T cd02742 19 KRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFYTYAQLKDIIEYAAARGIEVIPEIDM-PGH 97 (303)
T ss_pred HHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeECHHHHHHHHHHHHHcCCEEEEeccc-hHH
Confidence 45677889999999998875 321111 1100 0 001 11 4688999999999999999998743 331
Q ss_pred CCC------------CCCCCCC--CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHH
Q 013777 225 QNG------------NEHSATR--DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYK 289 (436)
Q Consensus 225 qng------------~~~sg~~--~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~ 289 (436)
... ...+... .+...-. +...+-..++++.+++-|...---+|-| |........+.+..|.+
T Consensus 98 ~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~lf~~~~iHiGgD---E~~~~~~~~~l~~~f~~ 174 (303)
T cd02742 98 STAFVKSFPKLLTECYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAELFPDRYLHIGGD---EAHFKQDRKHLMSQFIQ 174 (303)
T ss_pred HHHHHHhCHHhccCccccCCCCCCCCccCCCCccHHHHHHHHHHHHHHhCCCCeEEecce---ecCCCCCHHHHHHHHHH
Confidence 100 0000000 0000111 4556666788888888885432234533 32211123456778889
Q ss_pred HHHHHHHhhCCCeEEEEeC
Q 013777 290 AGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 290 ~~~~aIR~~~p~~~Viv~~ 308 (436)
++.+.|++.+. .+++-++
T Consensus 175 ~~~~~v~~~g~-~~~~W~d 192 (303)
T cd02742 175 RVLDIVKKKGK-KVIVWQD 192 (303)
T ss_pred HHHHHHHHcCC-eEEEecc
Confidence 99999998873 4444443
|
These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself. |
| >PRK05799 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=89.63 E-value=4.6 Score=40.96 Aligned_cols=124 Identities=19% Similarity=0.214 Sum_probs=76.6
Q ss_pred hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLHA-APGSQNGNEHSA 232 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH~-~pg~qng~~~sg 232 (436)
..+|++.++.+++.|+|.|-|.+ ..+.+..- ... .....+.+.++++.+++.|+. |-+|+-. .||
T Consensus 95 ~~~t~e~l~~l~~~G~~rvsiGv--qS~~d~~L-~~l~R~~~~~~~~~ai~~l~~~g~~~v~~dli~GlPg--------- 162 (374)
T PRK05799 95 GTFTEEKLKILKSMGVNRLSIGL--QAWQNSLL-KYLGRIHTFEEFLENYKLARKLGFNNINVDLMFGLPN--------- 162 (374)
T ss_pred CcCCHHHHHHHHHcCCCEEEEEC--ccCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC---------
Confidence 34789999999999999555544 43322100 001 112567788899999999996 6688653 343
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChhHHHHHHHHHHHHHHhhCCC
Q 013777 233 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 233 ~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
.+.+.+.+.++.+.+. + -+.|-.|.|.-+|..+ ..+.+.....|+.+.+.+.+.+=.
T Consensus 163 ----------qt~e~~~~~l~~~~~l-~-~~~is~y~l~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~Gy~ 230 (374)
T PRK05799 163 ----------QTLEDWKETLEKVVEL-N-PEHISCYSLIIEEGTPFYNLYENGKLKLPDEEEEREMYHYTIEFLKEKGYH 230 (374)
T ss_pred ----------CCHHHHHHHHHHHHhc-C-CCEEEEeccEecCCCHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCc
Confidence 3345566666666542 2 2345556677787642 023455667788888888887755
Q ss_pred eE
Q 013777 302 AY 303 (436)
Q Consensus 302 ~~ 303 (436)
++
T Consensus 231 ~y 232 (374)
T PRK05799 231 QY 232 (374)
T ss_pred EE
Confidence 53
|
|
| >PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins | Back alignment and domain information |
|---|
Probab=89.52 E-value=1.8 Score=37.60 Aligned_cols=64 Identities=17% Similarity=0.281 Sum_probs=44.8
Q ss_pred cCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEEcCCCCcceEEeccCCceEEEeeC
Q 013777 38 NETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISE 103 (436)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~~~~~~v~i~~~nG~~lq~~~~ 103 (436)
+...+.||+..++|+.||..|.+-++--++.+...-=+=++|.. +...|++++..|.||.++..
T Consensus 6 d~~~VRLRS~~~kYL~ADeDg~~Vs~~~~~~s~na~W~Ve~v~~--~~~~v~L~saYGrYL~as~~ 69 (142)
T PF04601_consen 6 DGKHVRLRSHHGKYLHADEDGEGVSQDRRGASLNAAWTVERVPG--SPNYVRLRSAYGRYLAASDE 69 (142)
T ss_pred CCCEEEEEecCCCEEEEcCCCCeEEECCCCCCCcceEEEEEecC--CCCEEEEeeccCceEeccCC
Confidence 46678999999999999976444455555554444334455553 35689999999999987643
|
Some family members contain two copies of the region. |
| >PRK13347 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=89.43 E-value=2.8 Score=43.77 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=74.8
Q ss_pred hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 232 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH-~~pg~qng~~~sg 232 (436)
..+|++.++.|+++|+|.|=|.| ..+.+.. -... .....+.+.++++.+++.|+. |-+|+- +.||
T Consensus 148 ~~lt~e~l~~L~~~G~~rvsiGv--QS~~~~v-l~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dli~GlPg--------- 215 (453)
T PRK13347 148 RTVTAEMLQALAALGFNRASFGV--QDFDPQV-QKAINRIQPEEMVARAVELLRAAGFESINFDLIYGLPH--------- 215 (453)
T ss_pred ccCCHHHHHHHHHcCCCEEEECC--CCCCHHH-HHHhCCCCCHHHHHHHHHHHHhcCCCcEEEeEEEeCCC---------
Confidence 34789999999999999655544 3222110 0001 123677888999999999996 778864 3443
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----------CCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 233 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------GVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 233 ~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
.+.+.+.+.++.+.+ ++ -..|..+.+...|... -.+.+.....++.+.+.+.+.+=.+
T Consensus 216 ----------qt~e~~~~tl~~~~~-l~-p~~i~~y~l~~~p~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~ 283 (453)
T PRK13347 216 ----------QTVESFRETLDKVIA-LS-PDRIAVFGYAHVPSRRKNQRLIDEAALPDAEERLRQARAVADRLLAAGYVP 283 (453)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEEeccccccchhhHHhcCCccCCcCHHHHHHHHHHHHHHHHHCCCEE
Confidence 234556666666654 22 2244445555555421 1134556678888888888877443
|
|
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=89.30 E-value=0.82 Score=53.47 Aligned_cols=64 Identities=23% Similarity=0.458 Sum_probs=42.9
Q ss_pred HHHHHHHHhCCCCEEEe-cCccccc--------------cCCC---CCCC-CccchHHHHHHHHHHHHHcCCEEEEEc--
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWIA--------------NDPT---PPKP-FVGGSSKVLDNAFDWAEKYGVKVIVDL-- 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~~--------------~~~~---~~~~-~~~~~l~~ld~~v~~a~~~Gi~VilDl-- 218 (436)
++.++.|+++|+|+|=| ||.-..- .++. .++| |-.+..+.|+++|+.|.++||+||||+
T Consensus 190 ~~~i~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~yWGY~~~~yfa~dp~yg~~~~~efk~lV~~~H~~GI~VILDvV~ 269 (1221)
T PRK14510 190 PEAISYLKKLGVSIVELNPIFASVDEHHLPQLGLSNYWGYNTVAFLAPDPRLAPGGEEEFAQAIKEAQSAGIAVILDVVF 269 (1221)
T ss_pred chhHHHHHHcCCCEEEeCCccccCcccccccccCcCcCCCCCCCCCCcChhhccCcHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 46688999999999988 5532110 1110 0111 211267889999999999999999997
Q ss_pred -CCCCC
Q 013777 219 -HAAPG 223 (436)
Q Consensus 219 -H~~pg 223 (436)
|...+
T Consensus 270 NHt~~~ 275 (1221)
T PRK14510 270 NHTGES 275 (1221)
T ss_pred ccccCC
Confidence 55443
|
|
| >PF00167 FGF: Fibroblast growth factor; InterPro: IPR002348 The interleukin-1 (IL1) and heparin-binding growth factor (HBGF) families share low sequence similarity (about 25% []) but have very similar structures | Back alignment and domain information |
|---|
Probab=89.20 E-value=6.2 Score=33.17 Aligned_cols=90 Identities=12% Similarity=0.146 Sum_probs=65.8
Q ss_pred cccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEe-CCceEEeecCCCCceEEEEecCCCCCceEEEEEcCC
Q 013777 5 FQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDG 83 (436)
Q Consensus 5 ~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~~ 83 (436)
+|+||.....| .|.+-++.-+....|.+..++.+.+.||.. .+.|+|.+. .+.|.+. ..+..-..|.-.-..
T Consensus 9 ~~~~L~i~~~g--~V~gt~~~~~~~s~~~i~~~~~g~V~i~~~~s~~YLcmn~---~G~ly~~-~~~~~~C~F~e~~~~- 81 (122)
T PF00167_consen 9 TGYFLQINPNG--TVDGTGDDNSPYSVFEIHSVGFGVVRIRGVKSCRYLCMNK---CGRLYGS-KNFNKDCVFREELLE- 81 (122)
T ss_dssp TSEEEEEETTS--BEEEESSTTSTTGEEEEEEEETTEEEEEETTTTEEEEEBT---TSBEEEE-SSBTGGGEEEEEEET-
T ss_pred CCeEEEECCCC--eEeCCCCcCcceeEEEEEeccceEEEEEEecceEEEEECC---CCeEccc-cccCCCceEEEEEcc-
Confidence 48999887755 778888888899999999999999999998 899999997 3457775 556667777743333
Q ss_pred CCcceEEecc--CCceEEEe
Q 013777 84 DSSRVRLSAS--NGMFIQAI 101 (436)
Q Consensus 84 ~~~~v~i~~~--nG~~lq~~ 101 (436)
+...+-.... .+.||-.+
T Consensus 82 n~y~~~~s~~~~~~~yla~~ 101 (122)
T PF00167_consen 82 NGYNTYESAKYGRGWYLAFN 101 (122)
T ss_dssp TSEEEEEESTTGTTEBCEBC
T ss_pred CCEEEEEeccCCccEEEEEC
Confidence 2334444443 47777554
|
Coupled with the Kunitz-type soybean trypsin inhibitors (STI), they form a structural superfamily. Despite their structural correspondence, however, they show no sequence similarity to the STI family. The crystal structures of interleukin-1 beta and HBGF1 have been solved, showing both families to have the same 12-stranded beta-sheet structure []; the beta-sheets are arranged in 3 similar lobes around a central axis, 6 strands forming an anti-parallel beta-barrel [, ]. The beta-sheets are generally well preserved and the crystal structures superimpose in these areas. The intervening loops are less well conserved - the loop between beta-strands 6 and 7 is slightly longer in interleukin-1 beta.; GO: 0008083 growth factor activity; PDB: 1AFC_F 1BAR_A 2P39_A 1EV2_D 2BFH_A 4FGF_A 1BAS_A 1BFG_A 1FQ9_B 1CVS_A .... |
| >PRK09058 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=89.12 E-value=3.9 Score=42.65 Aligned_cols=123 Identities=15% Similarity=0.057 Sum_probs=78.1
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcC-CEEEEEcC-CCCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYG-VKVIVDLH-AAPGSQNGNEHSAT 233 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~G-i~VilDlH-~~pg~qng~~~sg~ 233 (436)
.++++.++.+++.|+|.|-|.| ..+.+..- ... .....+.+.++++.++++| +.|.+||- +.||
T Consensus 160 ~~t~e~l~~l~~aGvnRiSiGV--QSf~d~vL-k~lgR~~~~~~~~~~i~~l~~~g~~~v~~DlI~GlPg---------- 226 (449)
T PRK09058 160 GFDDEKADAALDAGANRFSIGV--QSFNTQVR-RRAGRKDDREEVLARLEELVARDRAAVVCDLIFGLPG---------- 226 (449)
T ss_pred cCCHHHHHHHHHcCCCEEEecC--CcCCHHHH-HHhCCCCCHHHHHHHHHHHHhCCCCcEEEEEEeeCCC----------
Confidence 3689999999999999666654 33321100 000 1124567778899999999 78999985 3443
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CC-ChhHHHHHHHHHHHHHHhhCCC
Q 013777 234 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GV-ALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 234 ~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-----------~~-~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
...+.+.+-++.+.+ ++ -..|..|.|.-||..+ .. +.+....+|+.+.+.+++.+=.
T Consensus 227 ---------qT~e~~~~~l~~~~~-l~-~~~is~y~L~~~pgT~l~~~~~~g~l~~~~~~~~~~~my~~~~~~L~~~Gy~ 295 (449)
T PRK09058 227 ---------QTPEIWQQDLAIVRD-LG-LDGVDLYALNLLPGTPLAKAVEKGKLPPPATPAERADMYAYGVEFLAKAGWR 295 (449)
T ss_pred ---------CCHHHHHHHHHHHHh-cC-CCEEEEeccccCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 223444444555444 22 2456667888888642 11 4466778899999999888765
Q ss_pred eE
Q 013777 302 AY 303 (436)
Q Consensus 302 ~~ 303 (436)
++
T Consensus 296 ~y 297 (449)
T PRK09058 296 QL 297 (449)
T ss_pred EE
Confidence 53
|
|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=88.95 E-value=1.2 Score=49.43 Aligned_cols=59 Identities=25% Similarity=0.241 Sum_probs=42.1
Q ss_pred HHHHHHHHhCCCCEEEecCcccccc-CCCCCCC-C--c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIAN-DPTPPKP-F--V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~-~~~~~~~-~--~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+.++.|+++|+++|=||=.+.... ....+.. | + =+..+.|..+|+.|+++||+||+|+
T Consensus 524 ~ekldyL~~LG~taIWLpP~~~s~s~~GY~p~D~y~lds~yGT~~ELk~LI~a~H~~GIkVIlDi 588 (894)
T PLN02784 524 GEKAAELSSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDA 588 (894)
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5679999999999999976432110 0011111 1 1 1467899999999999999999997
|
|
| >COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=88.90 E-value=5.7 Score=41.02 Aligned_cols=123 Identities=21% Similarity=0.188 Sum_probs=81.5
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSATR 234 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~-VilDlH-~~pg~qng~~~sg~~ 234 (436)
.++.+-|+.+++.|+| ||.++-+.+.+..--.--.....+....+++.+++.|+. |-+||- +.|+
T Consensus 134 ~~~~e~~~~l~~~GvN--RiSlGVQsf~~~~lk~lgR~h~~~~~~~a~~~~~~~g~~~in~DLIyglP~----------- 200 (416)
T COG0635 134 TVEAEKFKALKEAGVN--RISLGVQSFNDEVLKALGRIHDEEEAKEAVELARKAGFTSINIDLIYGLPG----------- 200 (416)
T ss_pred CCCHHHHHHHHHcCCC--EEEeccccCCHHHHHHhcCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-----------
Confidence 4678999999999999 998887655322100000012456677889999999885 888985 3332
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC----------CChhHHHHHHHHHHHHHHhhCCCe
Q 013777 235 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG----------VALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 235 ~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~----------~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
.+.+.+.+.++.+.+ + +-+.|..|.|.-||...- .+.+.....++.+.+.+.+.+=.+
T Consensus 201 --------QT~~~~~~~l~~a~~-l-~pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~~~Gy~~ 268 (416)
T COG0635 201 --------QTLESLKEDLEQALE-L-GPDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLEKAGYRQ 268 (416)
T ss_pred --------CCHHHHHHHHHHHHh-C-CCCEEEEeeeecCCCchhhhhcccCCCCcChHHHHHHHHHHHHHHHHCCCcE
Confidence 334555555655554 2 245777899999998621 233456678888888888877643
|
|
| >PRK05660 HemN family oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=88.80 E-value=4.8 Score=40.98 Aligned_cols=124 Identities=19% Similarity=0.224 Sum_probs=76.0
Q ss_pred hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCEE-EEEcCC-CCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVKV-IVDLHA-APGSQNGNEHSA 232 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~V-ilDlH~-~pg~qng~~~sg 232 (436)
..++++.++.|+++|+| ||-++-..+.+..- ... .....+.+.++++.+++.|+.. -+|+-- .||
T Consensus 103 ~~l~~e~l~~Lk~~Gv~--risiGvqS~~~~~L-~~l~r~~~~~~~~~ai~~~~~~G~~~v~~dli~Glpg--------- 170 (378)
T PRK05660 103 GTVEADRFVGYQRAGVN--RISIGVQSFSEEKL-KRLGRIHGPDEAKRAAKLAQGLGLRSFNLDLMHGLPD--------- 170 (378)
T ss_pred CcCCHHHHHHHHHcCCC--EEEeccCcCCHHHH-HHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC---------
Confidence 34789999999999999 45444443321100 000 1235777888999999999974 588753 232
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC------C-CChhHHHHHHHHHHHHHHhhCCCeE
Q 013777 233 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------G-VALDTLKSYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 233 ~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~------~-~~~~~~~~~~~~~~~aIR~~~p~~~ 303 (436)
.+.+.+.+.++.+.+ . +-+.|..+.|.=||..+ . .+.+.....|+.+.+...+.+=.++
T Consensus 171 ----------qt~~~~~~~l~~~~~-l-~p~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~y 236 (378)
T PRK05660 171 ----------QSLEEALDDLRQAIA-L-NPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQY 236 (378)
T ss_pred ----------CCHHHHHHHHHHHHh-c-CCCeEEeeccEeccCCcccccCCCCcCHHHHHHHHHHHHHHHHHcCCcEe
Confidence 234556666666555 2 23455556677677531 1 1234556788888888888775554
|
|
| >TIGR00539 hemN_rel putative oxygen-independent coproporphyrinogen III oxidase | Back alignment and domain information |
|---|
Probab=88.73 E-value=5.7 Score=40.09 Aligned_cols=122 Identities=20% Similarity=0.145 Sum_probs=73.7
Q ss_pred hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLHA-APGSQNGNEHSA 232 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH~-~pg~qng~~~sg 232 (436)
..+|++.++.|+++|+|.|-|.+ ..+.+..- ... .....+.+.++++.+++.|+. |-+|+-. .|+
T Consensus 96 ~~lt~e~l~~l~~~Gv~risiGv--qS~~~~~l-~~lgR~~~~~~~~~ai~~l~~~G~~~v~~dli~GlPg--------- 163 (360)
T TIGR00539 96 ELITAEWCKGLKGAGINRLSLGV--QSFRDDKL-LFLGRQHSAKNIAPAIETALKSGIENISLDLMYGLPL--------- 163 (360)
T ss_pred CCCCHHHHHHHHHcCCCEEEEec--ccCChHHH-HHhCCCCCHHHHHHHHHHHHHcCCCeEEEeccCCCCC---------
Confidence 34789999999999999666544 32221100 001 123578888999999999995 7788754 333
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-------CChhHHHHHHHHHHHHHHhhCCC
Q 013777 233 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-------VALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 233 ~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~-------~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
.+.+.+.+.++.+.+ .+ -+.+..+.+.=||..+- .+.+....++..+.+.+++.+=.
T Consensus 164 ----------qt~~~~~~~l~~~~~-l~-~~~is~y~l~~~~gT~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~ 227 (360)
T TIGR00539 164 ----------QTLNSLKEELKLAKE-LP-INHLSAYALSVEPNTNFEKNAKKLPDDDSCAHFDEVVREILEGFGFK 227 (360)
T ss_pred ----------CCHHHHHHHHHHHHc-cC-CCEEEeecceEcCCChhhhhhhcCcCHHHHHHHHHHHHHHHHHcCCc
Confidence 234455555555554 22 23454566666665321 13345666777777777776543
|
Experimentally determined examples of oxygen-independent coproporphyrinogen III oxidase, an enzyme that replaces HemF function under anaerobic conditions, belong to a family of proteins described by the model hemN. This model, hemN_rel, models a closely related protein, shorter at the amino end and lacking the region containing the motif PYRT[SC]YP found in members of the hemN family. Several species, including E. coli, Helicobacter pylori, Aquifex aeolicus, and Chlamydia trachomatis, have members of both this family and the E. coli hemN family. The member of this family from Bacillus subtilis was shown to complement an hemF/hemN double mutant of Salmonella typimurium and to prevent accumulation of coproporphyrinogen III under anaerobic conditions, but the exact role of this protein is still uncertain. It is found in a number of species that do not synthesize heme de novo. |
| >PRK09249 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=87.77 E-value=3.8 Score=42.77 Aligned_cols=122 Identities=11% Similarity=0.041 Sum_probs=74.7
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCC-EEEEEcCC-CCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGV-KVIVDLHA-APGSQNGNEHSAT 233 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi-~VilDlH~-~pg~qng~~~sg~ 233 (436)
.+|++.++.|++.|+|.|-|.+ ..+.+.. -..+ .....+.+.++++.+++.|+ .|.+|+-. .||
T Consensus 148 ~lt~e~l~~l~~aG~~risiGv--qS~~~~~-L~~l~r~~~~~~~~~ai~~l~~~G~~~v~~dli~GlPg---------- 214 (453)
T PRK09249 148 ELDLEMLDALRELGFNRLSLGV--QDFDPEV-QKAVNRIQPFEFTFALVEAARELGFTSINIDLIYGLPK---------- 214 (453)
T ss_pred cCCHHHHHHHHHcCCCEEEECC--CCCCHHH-HHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEccCCC----------
Confidence 4789999999999999777766 2221110 0000 12356778889999999999 78888753 343
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----------CCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 234 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------GVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 234 ~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
.+.+.+.+.++.+.+ . +-..|-.+.|...|... -.+.+....++..+.+...+.+=.+
T Consensus 215 ---------qt~e~~~~~l~~~~~-l-~~~~i~~y~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 282 (453)
T PRK09249 215 ---------QTPESFARTLEKVLE-L-RPDRLAVFNYAHVPWLFKAQRKIDEADLPSPEEKLAILQQTIETLTEAGYQY 282 (453)
T ss_pred ---------CCHHHHHHHHHHHHh-c-CCCEEEEccCccchhhhhHhcCCCcccCCCHHHHHHHHHHHHHHHHHCCCEE
Confidence 234455555555554 1 22344445555555420 1244566778888888888776443
|
|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.76 E-value=1.3 Score=47.78 Aligned_cols=58 Identities=26% Similarity=0.406 Sum_probs=41.6
Q ss_pred CHHHHHHHHhCCCCEEEe-cCcccc-----ccCCC----CCCCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 159 TDEDFKFLSSNGINAVRI-PVGWWI-----ANDPT----PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRi-pv~~~~-----~~~~~----~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+++-+..|+++|+++|=| ||.-.. ..++. +...| +.-+-|.++|+.|.++||.||||.
T Consensus 167 a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq~~g~yAp~sry--GtPedfk~fVD~aH~~GIgViLD~ 234 (628)
T COG0296 167 AIELLPYLKELGITHIELMPVAEHPGDRSWGYQGTGYYAPTSRY--GTPEDFKALVDAAHQAGIGVILDW 234 (628)
T ss_pred HHHHhHHHHHhCCCEEEEcccccCCCCCCCCCCcceeccccccC--CCHHHHHHHHHHHHHcCCEEEEEe
Confidence 467788999999999997 553111 11111 11122 467889999999999999999997
|
|
| >KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.61 E-value=0.83 Score=49.37 Aligned_cols=61 Identities=20% Similarity=0.326 Sum_probs=41.5
Q ss_pred CCHHHHHHHHhCCCCEEEe-cCccc-cc-----cCC----CCCCCCc----cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 158 ITDEDFKFLSSNGINAVRI-PVGWW-IA-----NDP----TPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 158 ite~d~~~ia~~G~N~VRi-pv~~~-~~-----~~~----~~~~~~~----~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+||+++..||.+|+|+|-| |+.-. .. ..+ .|...|. ......++.+|+.|.+.||-|+||+
T Consensus 256 FteKvlphlK~LG~NaiqLmpi~Ef~~~~~s~GY~~~nFFapssrYgt~~s~~ri~efK~lVd~aHs~GI~VlLDV 331 (757)
T KOG0470|consen 256 FTEKVLPHLKKLGYNAIQLMPIFEFGHYYASWGYQVTNFFAPSSRYGTPESPCRINEFKELVDKAHSLGIEVLLDV 331 (757)
T ss_pred hhhhhhhHHHHhCccceEEeehhhhhhhhhccCcceeEeecccccccCCCcccchHHHHHHHHHHhhCCcEEehhh
Confidence 4688899999999999988 43211 00 000 0001111 2347789999999999999999998
|
|
| >PRK09057 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=87.38 E-value=5.5 Score=40.55 Aligned_cols=122 Identities=20% Similarity=0.109 Sum_probs=75.1
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCEEEEEcCC-CCCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVKVIVDLHA-APGSQNGNEHSATR 234 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~VilDlH~-~pg~qng~~~sg~~ 234 (436)
.++++.++.|++.|+|.|-| +-..+.+..- ... .....+.+.++++++++.++.|.+||-- .||
T Consensus 101 ~i~~e~L~~l~~~Gvnrisl--GvQS~~d~vL-~~l~R~~~~~~~~~ai~~~~~~~~~v~~dli~GlPg----------- 166 (380)
T PRK09057 101 SVEAGRFRGYRAAGVNRVSL--GVQALNDADL-RFLGRLHSVAEALAAIDLAREIFPRVSFDLIYARPG----------- 166 (380)
T ss_pred cCCHHHHHHHHHcCCCEEEE--ecccCCHHHH-HHcCCCCCHHHHHHHHHHHHHhCccEEEEeecCCCC-----------
Confidence 47889999999999995555 4343322110 000 1124566778889999999999999853 343
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 235 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 235 ~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
...+.+.+-++.+.+ + +-+.|..+.|.=||..+ -.+.+.....++.+.+.+.+.+-.+
T Consensus 167 --------qt~~~~~~~l~~~~~-l-~p~~is~y~L~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~G~~~ 235 (380)
T PRK09057 167 --------QTLAAWRAELKEALS-L-AADHLSLYQLTIEEGTAFYGLHAAGKLILPDEDLAADLYELTQEITAAAGLPA 235 (380)
T ss_pred --------CCHHHHHHHHHHHHh-c-CCCeEEeecceecCCChHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCch
Confidence 223344444555553 3 33466668888888631 1233555677888888887766433
|
|
| >PRK08446 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=87.25 E-value=7.2 Score=39.25 Aligned_cols=124 Identities=19% Similarity=0.112 Sum_probs=74.0
Q ss_pred hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLHA-APGSQNGNEHSA 232 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH~-~pg~qng~~~sg 232 (436)
.-+|++.++.+++.|+|.|-|.| ..+.+..- ... .....+.+.++++.+++.|+. |-+|+-- .||
T Consensus 94 ~~~~~e~l~~l~~~GvnRiSiGv--QS~~~~~L-~~lgR~~~~~~~~~ai~~lr~~g~~~v~iDli~GlPg--------- 161 (350)
T PRK08446 94 NSATKAWLKGMKNLGVNRISFGV--QSFNEDKL-KFLGRIHSQKQIIKAIENAKKAGFENISIDLIYDTPL--------- 161 (350)
T ss_pred CCCCHHHHHHHHHcCCCEEEEec--ccCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCCC---------
Confidence 34789999999999999655544 33322110 001 123577888899999999996 6688853 243
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC----hhHHHHHHHHHHHHHHhhCCCeE
Q 013777 233 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----LDTLKSYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 233 ~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~----~~~~~~~~~~~~~aIR~~~p~~~ 303 (436)
.+.+.+.+.++.+.+ .+ -+.|..+.|.=||..+-.. ...-...+..+.+.+++.+-.++
T Consensus 162 ----------qt~~~~~~~l~~~~~-l~-~~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~l~~~Gy~~y 224 (350)
T PRK08446 162 ----------DNKKLLKEELKLAKE-LP-INHLSAYSLTIEENTPFFEKNHKKKDDENLAKFFIEQLEELGFKQY 224 (350)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEeccceecCCChhHHhhhcCCCHHHHHHHHHHHHHHCCCcEE
Confidence 234455555655554 22 2355557777777642100 00113467777888888765543
|
|
| >COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.15 E-value=1.5 Score=45.96 Aligned_cols=59 Identities=25% Similarity=0.364 Sum_probs=40.7
Q ss_pred HHHHHHHhCCCCEEEe-cCccc-cccCCCCCCCC-----ccchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRI-PVGWW-IANDPTPPKPF-----VGGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~-~~~~~~~~~~~-----~~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+-++.|+++|+++|=| |+... ....+.....| .-+.++.++++++.|.++||+||+|+-
T Consensus 33 ~~LdYl~~LGv~aiwl~Pi~~s~~~~~gY~~~Dy~~id~~~Gt~~d~~~li~~~H~~gi~vi~D~V 98 (505)
T COG0366 33 EKLDYLKELGVDAIWLSPIFESPQADHGYDVSDYTKVDPHFGTEEDFKELVEEAHKRGIKVILDLV 98 (505)
T ss_pred HhhhHHHHhCCCEEEeCCCCCCCccCCCccccchhhcCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 5689999999999977 33221 01111100011 126899999999999999999999993
|
|
| >TIGR01212 radical SAM protein, TIGR01212 family | Back alignment and domain information |
|---|
Probab=87.10 E-value=7.8 Score=38.17 Aligned_cols=126 Identities=18% Similarity=0.241 Sum_probs=73.3
Q ss_pred hcCCHHHHHHHH---hCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCEEEEEcC-CCCCCCCCCCC
Q 013777 156 SYITDEDFKFLS---SNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVKVIVDLH-AAPGSQNGNEH 230 (436)
Q Consensus 156 ~~ite~d~~~ia---~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~VilDlH-~~pg~qng~~~ 230 (436)
..++++.++.|+ +.|++ +||-++...+.+..- ... .....+.+.++++.++++||.|.+++- +.||
T Consensus 119 d~l~~e~l~~L~~l~~~G~~-~~i~lGlQS~~d~~L-~~i~Rg~t~~~~~~ai~~l~~~gi~v~~~lI~GlPg------- 189 (302)
T TIGR01212 119 DCVPDEVLDLLAEYVERGYE-VWVELGLQTAHDKTL-KKINRGHDFACYVDAVKRARKRGIKVCSHVILGLPG------- 189 (302)
T ss_pred CcCCHHHHHHHHHhhhCCce-EEEEEccCcCCHHHH-HHHcCcChHHHHHHHHHHHHHcCCEEEEeEEECCCC-------
Confidence 456677666665 45885 445444443321100 001 112567788899999999999877654 2332
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC--------CCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 231 SATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP--------GVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 231 sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~--------~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
...+.+.+.++.+.+ ++ -..|-.+-|.-+|..+ ......+..++..+...++...|+.
T Consensus 190 ------------et~e~~~~t~~~l~~-l~-~d~i~i~~l~~~pgT~L~~~~~~g~~~~~~~~e~~~~~~~~l~~l~~~~ 255 (302)
T TIGR01212 190 ------------EDREEMMETAKIVSL-LD-VDGIKIHPLHVVKGTKMAKMYEKGELKTLSLEEYISLACDFLEHLPPEV 255 (302)
T ss_pred ------------CCHHHHHHHHHHHHh-cC-CCEEEEEEEEecCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCcCe
Confidence 233555566665554 22 2234446677777642 1223346778888889999888866
Q ss_pred EE
Q 013777 303 YV 304 (436)
Q Consensus 303 ~V 304 (436)
.|
T Consensus 256 ~i 257 (302)
T TIGR01212 256 VI 257 (302)
T ss_pred EE
Confidence 44
|
This uncharacterized protein family shows significant similarity to TIGR01211, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain. |
| >KOG2566 consensus Beta-glucocerebrosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.96 E-value=37 Score=34.39 Aligned_cols=228 Identities=18% Similarity=0.204 Sum_probs=111.9
Q ss_pred hCCCCEEEecCccccccCC-----CCCCCC-------ccchHHHHHHHHHHHHH---cCCEEEEEcCCCCCCCCCCCCCC
Q 013777 168 SNGINAVRIPVGWWIANDP-----TPPKPF-------VGGSSKVLDNAFDWAEK---YGVKVIVDLHAAPGSQNGNEHSA 232 (436)
Q Consensus 168 ~~G~N~VRipv~~~~~~~~-----~~~~~~-------~~~~l~~ld~~v~~a~~---~Gi~VilDlH~~pg~qng~~~sg 232 (436)
-+|+|..|+|+.-=.+... +.++.| ..+.++.---.++.|.+ .+|+..-....+||.-. .+|
T Consensus 135 Gl~y~~gRVPiAS~DFS~r~YsYdDv~~Df~l~nF~L~~ED~q~KIP~ik~A~~~~~~~lklfAsPWsaPgWlK---ttg 211 (518)
T KOG2566|consen 135 GLGYNIGRVPIASCDFSTREYSYDDVPDDFQLKNFSLPEEDLKLKIPFIKKAQKYNQGNLKLFASPWSAPGWLK---TTG 211 (518)
T ss_pred CccceeeeeeecccccccceeeccCCcccccccccCCchhhheeecHHHHHHHHhcCCCceEEecCCCCCceee---ecc
Confidence 4678899999952112110 011111 11222222234455544 45777777777776311 111
Q ss_pred CCCCCCCCC----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC----------CChhHHHHHHHHHH-HHHH
Q 013777 233 TRDGFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG----------VALDTLKSYYKAGY-DAVR 296 (436)
Q Consensus 233 ~~~~~~~w~----~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~----------~~~~~~~~~~~~~~-~aIR 296 (436)
...|...-. +.+-+.+.++.-.+.+.|..+. ..+|...-|||.... .+.+.-+.|.++-. .++.
T Consensus 212 ~m~G~G~l~g~~~d~yhqtya~YfvkFleaY~~~gi~FWglt~qNEPstG~d~~~k~Qtl~ftae~qRdFik~dLGPaLa 291 (518)
T KOG2566|consen 212 RMNGKGALLGDPGDIYHQTYARYFVKFLEAYAKHGIQFWGLTTQNEPSTGSDKKWKWQTLGFTAETQRDFIKKDLGPALA 291 (518)
T ss_pred cccccccccCCCCchhHHHHHHHHHHHHHHHHhcCceEEeecccCCCCcCcccCCceeecccCHHHHHHHHHHhcchhhh
Confidence 111111100 2444555555555566676665 568888999998631 34566667766554 3444
Q ss_pred hh--CCCeEEEE-eCCCCCCChhhhhccC----C-CCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhc
Q 013777 297 KY--TSTAYVIM-SNRLGPADHKELLSFA----S-GLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTS 368 (436)
Q Consensus 297 ~~--~p~~~Viv-~~~~~~~~~~~~~~~~----~-~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 368 (436)
+. ..+..|+| .+.=+ ....|.+.. . ..----+.+|.|..|... ..+++... .
T Consensus 292 ~s~~~knvkllilDD~Rg--~LP~WadtvlnDpeAakYv~GIaVHwY~df~~p------a~~L~eTh------------~ 351 (518)
T KOG2566|consen 292 SSKTTKNVKLLILDDQRG--LLPHWADTVLNDPEAAKYVHGIAVHWYQDFLEP------AKHLDETH------------R 351 (518)
T ss_pred cCCcCCceEEEEecCCcc--CCCccchhhccChhhhhhccceEEEeeccccCh------hhhhhhHH------------h
Confidence 33 23444444 43111 111221110 0 011123799999876431 11222111 1
Q ss_pred CCCe--EEeecccccC---C-CCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 369 NGPL--TFVGEWTCEW---N-VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 369 ~~p~--v~vGEwg~~~---~-~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
+.|- +|-.|=++.. + +.-.+.+...+|..+.++-+...-.||+=|.+--+
T Consensus 352 ~hP~~fifgTEAc~Gy~~~d~v~~Gswdrae~yasdii~dlnn~vtGWtdwNl~Ld 407 (518)
T KOG2566|consen 352 KHPNTFIFGTEACAGYKSKDGVDLGSWDRAEQYASDIITDLNNHVTGWTDWNLILD 407 (518)
T ss_pred hCCCeEEEeehhccccccccCccccchhhHHHHHHHHHHhhhhhccceeeeeeEec
Confidence 2232 4455554322 1 22234455677888877777767779999987643
|
|
| >TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase | Back alignment and domain information |
|---|
Probab=86.85 E-value=2.1 Score=47.64 Aligned_cols=60 Identities=18% Similarity=0.174 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCCCEEEecCcccc------ccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWI------ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~------~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
.+.+..|+++|+++|=|.=-+.. ..+.......++ +..+.|+++++.|+++||+||+|+-
T Consensus 19 ~~~L~YL~~LGv~~V~lsPi~~a~~gs~hGYdv~D~~~idp~lGt~edf~~Lv~aah~~Gm~vIlDiV 86 (825)
T TIGR02401 19 AALLPYLKSLGVSHLYLSPILTAVPGSTHGYDVVDHSEINPELGGEEGLRRLSEAARARGLGLIVDIV 86 (825)
T ss_pred HHhhHHHHHcCCCEEEeCcCccCCCCCCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 57799999999999977321210 001111111111 4689999999999999999999973
|
This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis. |
| >cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins | Back alignment and domain information |
|---|
Probab=85.95 E-value=30 Score=34.06 Aligned_cols=144 Identities=11% Similarity=0.046 Sum_probs=82.1
Q ss_pred HHHHHHHHhCCCCEEEecCccc-cc-cCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCC----CC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWW-IA-NDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN----EH 230 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~-~~-~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~----~~ 230 (436)
.+.++.|+..|+|.+=|-+.-- .+ ..|.- .+.| .-+.+.++++.|+++||.||..+-. ||..... ..
T Consensus 20 k~~id~ma~~k~N~l~lhl~D~f~~~~~p~~~~~~~~y---T~~ei~ei~~yA~~~gI~vIPeid~-pGH~~~~l~~~~~ 95 (301)
T cd06565 20 KKLLRLLALLGANGLLLYYEDTFPYEGEPEVGRMRGAY---TKEEIREIDDYAAELGIEVIPLIQT-LGHLEFILKHPEF 95 (301)
T ss_pred HHHHHHHHHcCCCEEEEEEecceecCCCcccccCCCCc---CHHHHHHHHHHHHHcCCEEEecCCC-HHHHHHHHhCccc
Confidence 5668889999999998866320 00 01110 1222 5688999999999999999998754 3321000 00
Q ss_pred CCCCC-C---CCCC-C-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC-CC-------CCChhHHHHHHHHHHHHHH
Q 013777 231 SATRD-G---FQEW-G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL-AP-------GVALDTLKSYYKAGYDAVR 296 (436)
Q Consensus 231 sg~~~-~---~~~w-~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~-~~-------~~~~~~~~~~~~~~~~aIR 296 (436)
...++ . ...- . +...+-..++++.++.-|...---+|-|=..+.. .. ....+.+..+..++.+.|+
T Consensus 96 ~~l~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f~s~~~HIG~DE~~~~g~~~~~~~~~~~~~~~l~~~~~~~v~~~v~ 175 (301)
T cd06565 96 RHLREVDDPPQTLCPGEPKTYDFIEEMIRQVLELHPSKYIHIGMDEAYDLGRGRSLRKHGNLGRGELYLEHLKKVLKIIK 175 (301)
T ss_pred ccccccCCCCCccCCCChhHHHHHHHHHHHHHHhCCCCeEEECCCcccccCCCHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 00000 0 0000 1 4555666678888888887322224433222211 10 1123467889999999999
Q ss_pred hhCCCeEEEEeC
Q 013777 297 KYTSTAYVIMSN 308 (436)
Q Consensus 297 ~~~p~~~Viv~~ 308 (436)
+.++ .+++-++
T Consensus 176 ~~g~-~~~~W~D 186 (301)
T cd06565 176 KRGP-KPMMWDD 186 (301)
T ss_pred HcCC-EEEEEhH
Confidence 9987 4455444
|
GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins | Back alignment and domain information |
|---|
Probab=85.88 E-value=19 Score=35.77 Aligned_cols=144 Identities=13% Similarity=0.136 Sum_probs=81.6
Q ss_pred HHHHHHHHhCCCCEEEecCcc-ccccCCCCCC--------------------CCc-cc--hHHHHHHHHHHHHHcCCEEE
Q 013777 160 DEDFKFLSSNGINAVRIPVGW-WIANDPTPPK--------------------PFV-GG--SSKVLDNAFDWAEKYGVKVI 215 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~-~~~~~~~~~~--------------------~~~-~~--~l~~ld~~v~~a~~~Gi~Vi 215 (436)
.+-++.|+..++|.+-+.+.- |.+.-+..|. ... .+ ..+.+.++++.|+++||.||
T Consensus 20 k~~id~ma~~K~N~lhlHltD~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 20 KDIIKTMSWYKMNDLQLHLNDNLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred HHHHHHHHHcCCceEEEeecCCcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 466778899999999987642 1111110000 000 11 56889999999999999999
Q ss_pred EEcCCCCCCCCCC-------CC----CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCC-CCce-eEEEeecCCCCCCCCh
Q 013777 216 VDLHAAPGSQNGN-------EH----SATRDGFQEWG-DSNVADTVAVIDFLAARYAN-RPSL-AAIELINEPLAPGVAL 281 (436)
Q Consensus 216 lDlH~~pg~qng~-------~~----sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~-~~~v-~g~eL~NEP~~~~~~~ 281 (436)
..+-. ||....+ .. +....+..... +...+-..++++.+++-|.. .+.+ +|-| |-.......
T Consensus 100 PEID~-PGH~~a~~~~~pel~~~~~~~~~~~~~l~~~~~~t~~f~~~l~~E~~~~f~~~~~~~HiGgD---E~~~~~~~~ 175 (326)
T cd06564 100 PEIDS-PGHSLAFTKAMPELGLKNPFSKYDKDTLDISNPEAVKFVKALFDEYLDGFNPKSDTVHIGAD---EYAGDAGYA 175 (326)
T ss_pred ccCCC-cHHHHHHHHhhHHhcCCCcccCCCcccccCCCHHHHHHHHHHHHHHHHhcCCCCCEEEeccc---cccccCccH
Confidence 97743 3321000 00 00000111111 44555566788888888873 3332 4432 222112345
Q ss_pred hHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 282 DTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 282 ~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
+.+..|.+++.+.|++.+. .+++-.+
T Consensus 176 ~~~~~f~~~~~~~v~~~gk-~~~~W~d 201 (326)
T cd06564 176 EAFRAYVNDLAKYVKDKGK-TPRVWGD 201 (326)
T ss_pred HHHHHHHHHHHHHHHHcCC-eEEEeCC
Confidence 7788999999999999854 3444443
|
Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PLN03244 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=85.79 E-value=14 Score=40.98 Aligned_cols=113 Identities=17% Similarity=0.246 Sum_probs=63.4
Q ss_pred chHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC----------CCCCCCCCCCCCCCCC--------hhHHHHHHHHHH
Q 013777 195 GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ----------NGNEHSATRDGFQEWG--------DSNVADTVAVID 253 (436)
Q Consensus 195 ~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q----------ng~~~sg~~~~~~~w~--------~~~~~~~~~~~~ 253 (436)
+..+.|.++|+.|.++||.||||+ |..+... ..+.+.+.+.....|. +..++..++.++
T Consensus 438 GTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fDGt~~~Yf~~~~~g~~~~WGs~~fnyg~~EVr~FLLsna~ 517 (872)
T PLN03244 438 GTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFDGSNDCYFHTGKRGHHKHWGTRMFKYGDLDVLHFLISNLN 517 (872)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEecCccCCCccccchhhcCCCccceeccCCCCccCCCCCceecCCCHHHHHHHHHHHH
Confidence 357889999999999999999996 3333211 0122222111123454 344455556666
Q ss_pred HHHHHhCCC-------CceeEEE--e--ecCCCC----CCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 254 FLAARYANR-------PSLAAIE--L--INEPLA----PGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 254 ~lA~ry~~~-------~~v~g~e--L--~NEP~~----~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
...+.|.=+ ++++-.+ + .+.+.. ...+ ..-..|++.+-..|++..|+.+.|.++
T Consensus 518 yWleEyhIDGFRfDaVtSMLY~d~G~~~f~g~~~~y~n~~~d-~dAv~fL~laN~~ih~~~P~~itIAED 586 (872)
T PLN03244 518 WWITEYQIDGFQFHSLASMIYTHNGFASFNGDLDDYCNQYVD-KDALMYLILANEILHALHPKIITIAED 586 (872)
T ss_pred HHHHHhCcCcceeecchhheeeccccccccCCccccccccCC-chHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 666665432 1112111 1 011110 0112 345568888889999999998777763
|
|
| >PRK06582 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=85.72 E-value=9 Score=39.22 Aligned_cols=124 Identities=17% Similarity=0.108 Sum_probs=78.0
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCC-CCCCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA-APGSQNGNEHSATRD 235 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~-~pg~qng~~~sg~~~ 235 (436)
.++++.++.|+++|+| ||-++-..+.+..-..--.....+...++++.|++.+..|.+||-- .||
T Consensus 108 ~~~~e~l~~l~~~Gvn--RiSiGvQS~~d~~L~~lgR~h~~~~~~~ai~~~~~~~~~v~~DlI~GlPg------------ 173 (390)
T PRK06582 108 SFETEKFKAFKLAGIN--RVSIGVQSLKEDDLKKLGRTHDCMQAIKTIEAANTIFPRVSFDLIYARSG------------ 173 (390)
T ss_pred cCCHHHHHHHHHCCCC--EEEEECCcCCHHHHHHcCCCCCHHHHHHHHHHHHHhCCcEEEEeecCCCC------------
Confidence 4789999999999998 5555444332210000001124566677788888888889999863 332
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChhHHHHHHHHHHHHHHhhCCCeE
Q 013777 236 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 236 ~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~~ 303 (436)
...+.+.+-++.+++ + +-+.|-.+.|.=||..+ ..+.+.....|+.+.+.+++.+=.++
T Consensus 174 -------qt~e~~~~~l~~~~~-l-~p~his~y~L~i~~gT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~y 243 (390)
T PRK06582 174 -------QTLKDWQEELKQAMQ-L-ATSHISLYQLTIEKGTPFYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFRY 243 (390)
T ss_pred -------CCHHHHHHHHHHHHh-c-CCCEEEEecCEEccCChHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCcee
Confidence 233445555555554 2 33567778888888642 12345667788888888888876554
|
|
| >cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) | Back alignment and domain information |
|---|
Probab=85.69 E-value=40 Score=33.63 Aligned_cols=135 Identities=15% Similarity=0.132 Sum_probs=76.7
Q ss_pred HHHHHHHHhCCCCEEEecCcc---ccccCCCCC-----CCC------ccc--hHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGW---WIANDPTPP-----KPF------VGG--SSKVLDNAFDWAEKYGVKVIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~---~~~~~~~~~-----~~~------~~~--~l~~ld~~v~~a~~~Gi~VilDlH~~pg 223 (436)
.+.++.|+..++|.+-+.+.- |.+.-+.-| +.+ ..+ ..+.+.++|+.|+++||.||..+-. ||
T Consensus 21 k~~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~~~~~~~~~~~YT~~di~elv~yA~~rgI~vIPEiD~-PG 99 (329)
T cd06568 21 KRYIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGSTEVGGGPGGYYTQEDYKDIVAYAAERHITVVPEIDM-PG 99 (329)
T ss_pred HHHHHHHHHhCCcEEEEEeecCCcceeeecCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecCC-cH
Confidence 456778899999999887741 212111100 000 011 4678999999999999999998743 23
Q ss_pred CCC------C-CCCCCCC----------CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHH
Q 013777 224 SQN------G-NEHSATR----------DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLK 285 (436)
Q Consensus 224 ~qn------g-~~~sg~~----------~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~ 285 (436)
... + ..+.+.. .+..... +...+-..++++.+++-|.+.---+|- -|... ...+.+.
T Consensus 100 H~~a~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~E~~~~f~~~~iHiGg---DE~~~--~~~~~~~ 174 (329)
T cd06568 100 HTNAALAAYPELNCDGKAKPLYTGIEVGFSSLDVDKPTTYEFVDDVFRELAALTPGPYIHIGG---DEAHS--TPHDDYA 174 (329)
T ss_pred HHHHHHHhChhhccCCCCCccccccCCCCcccCCCCHHHHHHHHHHHHHHHHhCCCCeEEEec---ccCCC--CchHHHH
Confidence 110 0 0000000 0000111 344555567778888777543222442 34432 2456788
Q ss_pred HHHHHHHHHHHhhCC
Q 013777 286 SYYKAGYDAVRKYTS 300 (436)
Q Consensus 286 ~~~~~~~~aIR~~~p 300 (436)
.|.+++.+.|++.+.
T Consensus 175 ~f~~~~~~~v~~~Gk 189 (329)
T cd06568 175 YFVNRVRAIVAKYGK 189 (329)
T ss_pred HHHHHHHHHHHHCCC
Confidence 899999999998764
|
SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. |
| >cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=84.57 E-value=21 Score=35.89 Aligned_cols=146 Identities=11% Similarity=0.122 Sum_probs=78.6
Q ss_pred HHHHHHHHhCCCCEEEecCcc---ccccCCCCC-----CCCcc-c--hHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGW---WIANDPTPP-----KPFVG-G--SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 228 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~---~~~~~~~~~-----~~~~~-~--~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~ 228 (436)
.+.++.|+..++|.+-+.+.- |.+.-+.-| +.+.. + ..+.+..+|+.|+++||.||..+- .||.....
T Consensus 21 k~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~ga~~~~~~YT~~di~eiv~yA~~rgI~vIPEID-~PGH~~a~ 99 (348)
T cd06562 21 KRTIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKGAYSPSEVYTPEDVKEIVEYARLRGIRVIPEID-TPGHTGSW 99 (348)
T ss_pred HHHHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhccCcCCCceECHHHHHHHHHHHHHcCCEEEEecc-CchhhHHH
Confidence 456778899999999887631 222111111 11111 1 578899999999999999999874 24421110
Q ss_pred ------------C----CCCCCCCCCC-CC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC------------
Q 013777 229 ------------E----HSATRDGFQE-WG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG------------ 278 (436)
Q Consensus 229 ------------~----~sg~~~~~~~-w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~------------ 278 (436)
. .+........ -. +...+-..++++.+++-|...---+|-|=.+......
T Consensus 100 ~~~~p~l~~~~~~~~~~~~~~~~~~~L~~~~~~t~~fl~~vl~E~~~lF~~~~iHiGgDE~~~~~w~~~p~~~~~m~~~g 179 (348)
T cd06562 100 GQGYPELLTGCYAVWRKYCPEPPCGQLNPTNPKTYDFLKTLFKEVSELFPDKYFHLGGDEVNFNCWNSNPEIQKFMKKNN 179 (348)
T ss_pred HHhChhhhCCCCccccccccCCCCccccCCChhHHHHHHHHHHHHHHhcCCcceEeecCCCCCCcccCCHHHHHHHHHcC
Confidence 0 0000000000 00 3445555678888888886432234544333221110
Q ss_pred -CC-hhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 279 -VA-LDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 279 -~~-~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
.+ .+.+..|.+++.+.|++.+. .+++-+
T Consensus 180 ~~~~~~l~~~f~~~~~~~l~~~Gk-~~i~W~ 209 (348)
T cd06562 180 GTDYSDLESYFIQRALDIVRSLGK-TPIVWE 209 (348)
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCC-eEEEee
Confidence 01 12334578888899998874 344444
|
The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in |
| >PRK14511 maltooligosyl trehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=84.12 E-value=3.5 Score=46.29 Aligned_cols=59 Identities=15% Similarity=0.169 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCCEEEecCcccc------ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWI------ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~------~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
.+.+..|+++|+++|=|+=-+.. ..+... .+|-. +..+.|+++++.|+++||+||+|+-
T Consensus 23 ~~~l~YL~~LGis~IyLsPi~~a~~gs~hGYdv~D~~~idp~l-Gt~e~f~~Lv~aah~~Gi~VIlDiV 90 (879)
T PRK14511 23 AELVPYFADLGVSHLYLSPILAARPGSTHGYDVVDHTRINPEL-GGEEGLRRLAAALRAHGMGLILDIV 90 (879)
T ss_pred HHHhHHHHHcCCCEEEECcCccCCCCCCCCCCcCCCCCcCCCC-CCHHHHHHHHHHHHHCCCEEEEEec
Confidence 57789999999999988332211 001111 11111 4678999999999999999999983
|
|
| >PRK08207 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=83.09 E-value=12 Score=39.51 Aligned_cols=123 Identities=18% Similarity=0.259 Sum_probs=74.1
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCC-EEEEEcCC-CCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGV-KVIVDLHA-APGSQNGNEHSAT 233 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi-~VilDlH~-~pg~qng~~~sg~ 233 (436)
.+|++.++.|++.|+| ||-++...+.+..- ... .....+.+.++++.|+++|+ .|-+|+-. .||
T Consensus 266 ~it~e~L~~Lk~~Gv~--RISIGvQS~~d~vL-k~igR~ht~e~v~~ai~~ar~~Gf~~In~DLI~GLPg---------- 332 (488)
T PRK08207 266 TITEEKLEVLKKYGVD--RISINPQTMNDETL-KAIGRHHTVEDIIEKFHLAREMGFDNINMDLIIGLPG---------- 332 (488)
T ss_pred CCCHHHHHHHHhcCCC--eEEEcCCcCCHHHH-HHhCCCCCHHHHHHHHHHHHhCCCCeEEEEEEeCCCC----------
Confidence 5789999999999999 55454443321100 000 12367888899999999999 77788753 333
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC---------CCChhHHHHHHHHHHHHHHhhCCCeE
Q 013777 234 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP---------GVALDTLKSYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 234 ~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~---------~~~~~~~~~~~~~~~~aIR~~~p~~~ 303 (436)
.+.+.+.+.++.+.+ .+ -+.|-.+.|.=+|..+ -.+.+.....++.+.+..++.+-.++
T Consensus 333 ---------Et~ed~~~tl~~l~~-L~-pd~isv~~L~i~~gT~l~~~~~~~~~~~~~~~~~m~~~a~~~l~~~Gy~~Y 400 (488)
T PRK08207 333 ---------EGLEEVKHTLEEIEK-LN-PESLTVHTLAIKRASRLTENKEKYKVADREEIEKMMEEAEEWAKELGYVPY 400 (488)
T ss_pred ---------CCHHHHHHHHHHHHh-cC-cCEEEEEeceEcCCChHHHhcCcCCCcCHHHHHHHHHHHHHHHHHcCCHhh
Confidence 234455555555543 22 2233334444444321 12345667788888888888775554
|
|
| >COG3589 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=81.24 E-value=3.4 Score=40.88 Aligned_cols=52 Identities=17% Similarity=0.158 Sum_probs=39.7
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
.+-++.+++.||.-|=..+. .+++..+..+.+++++++.|.+.||+||+|.-
T Consensus 19 ~~Yi~~~~~~Gf~~IFtsl~--------~~~~~~~~~~~~~~ell~~Anklg~~vivDvn 70 (360)
T COG3589 19 IAYIDRMHKYGFKRIFTSLL--------IPEEDAELYFHRFKELLKEANKLGLRVIVDVN 70 (360)
T ss_pred HHHHHHHHHcCccceeeecc--------cCCchHHHHHHHHHHHHHHHHhcCcEEEEEcC
Confidence 35577788899986654332 22344456899999999999999999999986
|
|
| >cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=80.27 E-value=69 Score=32.27 Aligned_cols=147 Identities=11% Similarity=0.086 Sum_probs=78.7
Q ss_pred HHHHHHHHhCCCCEEEecCcc---ccccCCCCC-----CCCc-----------------cc--hHHHHHHHHHHHHHcCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGW---WIANDPTPP-----KPFV-----------------GG--SSKVLDNAFDWAEKYGV 212 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~---~~~~~~~~~-----~~~~-----------------~~--~l~~ld~~v~~a~~~Gi 212 (436)
.+.++.|+..++|.+-+.+.- |.+.-+.-| +.+. .+ ..+.+.++++.|+++||
T Consensus 21 k~~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI 100 (357)
T cd06563 21 KRFIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGI 100 (357)
T ss_pred HHHHHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCC
Confidence 456778899999999987731 111111100 0000 11 47889999999999999
Q ss_pred EEEEEcCCCCCCCC------C-CCCCCCC----------CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCC
Q 013777 213 KVIVDLHAAPGSQN------G-NEHSATR----------DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEP 274 (436)
Q Consensus 213 ~VilDlH~~pg~qn------g-~~~sg~~----------~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP 274 (436)
.||..+-. ||... + ..+.+.. .+...-. +...+-..++++.+++-|...---+|-|=.+.-
T Consensus 101 ~VIPEID~-PGH~~a~l~~~pel~~~~~~~~~~~~~~~~~~~L~~~~~~t~~f~~~ll~E~~~lF~~~~iHiGgDE~~~~ 179 (357)
T cd06563 101 TVIPEIDM-PGHALAALAAYPELGCTGGPGSVVSVQGVVSNVLCPGKPETYTFLEDVLDEVAELFPSPYIHIGGDEVPKG 179 (357)
T ss_pred EEEEecCC-chhHHHHHHhCccccCCCCCCccccccCcCCCccCCCChhHHHHHHHHHHHHHHhCCCCeEEEeccccCCc
Confidence 99998743 33210 0 0000000 0000001 345555667888888888643333554333221
Q ss_pred CCCC-------------CCh-hHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 275 LAPG-------------VAL-DTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 275 ~~~~-------------~~~-~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
.... .+. +.+..|.+++.+.|++.+. .+++-++
T Consensus 180 ~w~~~~~~~~~~~~~g~~~~~~l~~~f~~~~~~~v~~~G~-~~i~W~d 226 (357)
T cd06563 180 QWEKSPACQARMKEEGLKDEHELQSYFIKRVEKILASKGK-KMIGWDE 226 (357)
T ss_pred ccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHcCC-EEEEeec
Confidence 1100 022 2345678899999998763 4444443
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 436 | ||||
| 1eqp_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans Length | 4e-38 | ||
| 2pc8_A | 400 | E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida | 6e-38 | ||
| 2pbo_A | 400 | E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida A | 6e-38 | ||
| 2pb1_A | 400 | Exo-b-(1,3)-glucanase From Candida Albicans In Comp | 6e-38 | ||
| 1cz1_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 | 6e-38 | ||
| 3n9k_A | 399 | F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 1e-37 | ||
| 3o6a_A | 399 | F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 1e-37 | ||
| 2pf0_A | 400 | F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida | 3e-37 | ||
| 1h4p_A | 408 | Crystal Structure Of Exo-1,3-Beta Glucanse From Sac | 3e-30 | ||
| 1cec_A | 343 | A Common Protein Fold And Similar Active Site In Tw | 4e-12 | ||
| 1cen_A | 343 | Cellulase (Celc) Mutant With Glu 140 Replaced By Gl | 9e-12 | ||
| 3mmu_A | 317 | Crystal Structure Of Endoglucanase Cel5a From The H | 7e-09 | ||
| 3azr_A | 317 | Diverse Substrates Recognition Mechanism Revealed B | 9e-09 | ||
| 3aof_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 5e-08 | ||
| 3amg_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 5e-08 | ||
| 1vjz_A | 341 | Crystal Structure Of Endoglucanase (Tm1752) From Th | 4e-06 |
| >pdb|1EQP|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans Length = 394 | Back alignment and structure |
|
| >pdb|2PC8|A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A Length = 400 | Back alignment and structure |
|
| >pdb|2PBO|A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Length = 400 | Back alignment and structure |
|
| >pdb|2PB1|A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|1CZ1|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution Length = 394 | Back alignment and structure |
|
| >pdb|3N9K|A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A Length = 399 | Back alignment and structure |
|
| >pdb|3O6A|A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A Length = 399 | Back alignment and structure |
|
| >pdb|2PF0|A Chain A, F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|1H4P|A Chain A, Crystal Structure Of Exo-1,3-Beta Glucanse From Saccharomyces Cerevisiae Length = 408 | Back alignment and structure |
|
| >pdb|1CEC|A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases Length = 343 | Back alignment and structure |
|
| >pdb|1CEN|A Chain A, Cellulase (Celc) Mutant With Glu 140 Replaced By Gln Complexed With Cellohexaose Length = 343 | Back alignment and structure |
|
| >pdb|3MMU|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The Hyperthermophilic Thermotoga Maritima Length = 317 | Back alignment and structure |
|
| >pdb|3AZR|A Chain A, Diverse Substrates Recognition Mechanism Revealed By Thermotoga Maritima Cel5a Structures In Complex With Cellobiose Length = 317 | Back alignment and structure |
|
| >pdb|3AOF|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Mannotriose Substrate Length = 317 | Back alignment and structure |
|
| >pdb|3AMG|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Cellobiose Substrate, Mutant Form Length = 317 | Back alignment and structure |
|
| >pdb|1VJZ|A Chain A, Crystal Structure Of Endoglucanase (Tm1752) From Thermotoga Maritima At 2.05 A Resolution Length = 341 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 436 | |||
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 1e-69 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 6e-67 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 1e-58 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 7e-53 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 2e-48 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 7e-41 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 4e-30 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 9e-30 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 4e-29 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 8e-29 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 8e-28 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 3e-26 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 4e-26 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 1e-25 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 4e-25 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 1e-23 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 2e-21 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 3e-21 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 8e-21 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 1e-20 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 1e-20 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 3e-20 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 1e-19 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 5e-19 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 3e-18 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 6e-18 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 3e-05 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 2e-17 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 3e-16 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 6e-16 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 2e-14 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 5e-13 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 1e-11 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 1e-05 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 4e-09 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 2e-07 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 2e-07 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 6e-06 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 4e-05 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 3e-04 |
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Length = 399 | Back alignment and structure |
|---|
Score = 225 bits (573), Expect = 1e-69
Identities = 103/336 (30%), Positives = 158/336 (47%), Gaps = 38/336 (11%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 50 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 108
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 109 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 168
Query: 254 FLAARYANRP---SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310
+ +Y + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 169 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAA 228
Query: 311 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGA----- 364
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 229 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 288
Query: 365 VTTSNGPLTFVGEWTCEWNVK--------------------------DASKQDYQRFANA 398
+ + LT +W N D K D +R+ A
Sbjct: 289 AGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEA 348
Query: 399 QLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 433
QLD + T GW +W+ K E A WS + + NG
Sbjct: 349 QLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNGLF 383
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Length = 408 | Back alignment and structure |
|---|
Score = 218 bits (556), Expect = 6e-67
Identities = 89/343 (25%), Positives = 143/343 (41%), Gaps = 43/343 (12%)
Query: 133 GEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF 192
EY G D A LQ HW ++ ++DF ++S G N VRIP+G+W
Sbjct: 49 DEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYV 108
Query: 193 VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 252
G LD A WA +KV VDLH A GSQNG ++S RD ++ DSN+A T+ V+
Sbjct: 109 SGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVL 168
Query: 253 DFLAARYANRPS---LAAIELINEPLAPGVALDT-LKSYYKAGYDAVRKYTSTAYVIMSN 308
+++ +Y+ + IELINEPL P + +D Y Y+ +R + VI+ +
Sbjct: 169 NYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIH 228
Query: 309 RL--GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASD----- 361
+ ++ G V ID H+Y +F+++ ++ ++I
Sbjct: 229 DAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESH 288
Query: 362 ----------LGAVTTSNGPLTFVGEWTCEWNVKDAS--------------------KQD 391
L + F + W D + K++
Sbjct: 289 WIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKEN 348
Query: 392 YQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 433
+R+ AQLD + GW W +K E + W + ++ NG
Sbjct: 349 TRRYVEAQLDAF-EMRGGWIIWCYKTESSLEWDAQRLMFNGLF 390
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Length = 343 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 1e-58
Identities = 57/330 (17%), Positives = 112/330 (33%), Gaps = 55/330 (16%)
Query: 144 DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNA 203
+ ++H+D++IT++D + ++ G + VR+P + I + +D
Sbjct: 15 SQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRC 74
Query: 204 FDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP 263
+W +KY + +++D+H APG + + ++T + V + FLA RY N
Sbjct: 75 LEWCKKYNLGLVLDMHHAPGYRFQDFKTSTLF----EDPNQQKRFVDIWRFLAKRYINER 130
Query: 264 SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS--NRLGPADHKELLSF 321
A EL+N+ + P A+R+ ST ++ + N P + K L
Sbjct: 131 EHIAFELLNQVVEPDS--TRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLADI 188
Query: 322 ASGLSRVVIDVHYYNLF-----------------------------------SNNFNGLN 346
+V + H+YN F + ++ +
Sbjct: 189 DDD--YIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMM 246
Query: 347 VQQNIDYVNNQRASDLGAVT---TSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVY 403
N+ DL + GE+ + A + ++ + +
Sbjct: 247 ELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGV---IAIADLESRIKWHEDYISLL 303
Query: 404 GRATFGWAYWAHKCEA----NHWSLKWMIE 429
G A W +K N E
Sbjct: 304 EEYDIGGAVWNYKKMDFEIYNEDRKPVSQE 333
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Length = 341 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 7e-53
Identities = 50/299 (16%), Positives = 94/299 (31%), Gaps = 32/299 (10%)
Query: 150 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEK 209
+EDF +++ N VRIP+ + +D P + +D W EK
Sbjct: 29 FSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEK 88
Query: 210 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPS-LAAI 268
YG+ + + LH APG E + +++ ++ + F+A RY S +
Sbjct: 89 YGIHICISLHRAPGYSVNKEVEEKTNLWKD--ETAQEAFIHHWSFIARRYKGISSTHLSF 146
Query: 269 ELINEPLAPG---VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 325
LINEP P ++++ S K +RK +I+ + + +
Sbjct: 147 NLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIII----DGLGYGNIPVDDLTI 202
Query: 326 SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTS----------------- 368
V Y FS + D+ + +
Sbjct: 203 ENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQ 262
Query: 369 -NGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKW 426
+ F GE ++ L+++ G+A W + +
Sbjct: 263 KGIEV-FCGEMGA---YNKTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGPFGILDSER 317
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Length = 317 | Back alignment and structure |
|---|
Score = 167 bits (423), Expect = 2e-48
Identities = 51/288 (17%), Positives = 93/288 (32%), Gaps = 28/288 (9%)
Query: 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 212
W I DE F + G + VRIP+ W PP + K +D + A K G+
Sbjct: 29 DWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGL 88
Query: 213 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 272
V++++H N E R +A+ +A RY + P E++N
Sbjct: 89 AVVINIHHYEELMNDPEEHKER-------------FLALWKQIADRYKDYPETLFFEILN 135
Query: 273 EPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM-SNRLGPADHKELLSFASGLSRVVID 331
P + + +R +I+ + G E LS ++
Sbjct: 136 APHGNLTP-EKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVT 194
Query: 332 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV------- 384
+HYYN F G + + ++ F+ EW+ +
Sbjct: 195 IHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEF 254
Query: 385 ---KDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE---ANHWSLKW 426
+ A + ++ + + + + AYW + W
Sbjct: 255 GAYRKADLESRIKWTSFVVREMEKRRWSLAYWEFCSGFGVYDTLRKTW 302
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Length = 320 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 7e-41
Identities = 59/329 (17%), Positives = 100/329 (30%), Gaps = 40/329 (12%)
Query: 119 DPSVFKLNIVSTLRGEYQITNGF---GPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 175
D SV ++ S I +G +AP + W YI DE FK + G ++VR
Sbjct: 2 DQSVSNVDKSSAFEYNKMIGHGINMGNALEAPV--EGSWGVYIEDEYFKIIKERGFDSVR 59
Query: 176 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 235
IP+ W P + + D A K + VI++ H
Sbjct: 60 IPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFE------------- 106
Query: 236 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAV 295
+ D V + +A + + P E+ NEP Y +
Sbjct: 107 ELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQNLTP-TKWNELYPKVLGEI 165
Query: 296 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGL---------- 345
RK + VI+ +++ HYY F+ G
Sbjct: 166 RKTNPSRIVIIDVPNWSNYSYVRELKLVDDKNIIVSFHYYEPFNFTHQGAEWVSPTLPIG 225
Query: 346 ----NVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLD 401
++ + N +N P+ F+GE+ A + ++
Sbjct: 226 VKWEGKDWEVEQIRNHFKYVSEWAKKNNVPI-FLGEFGAYSK---ADMESRVKWTKTVRR 281
Query: 402 VYGRATFGWAYWAHKCE---ANHWSLKWM 427
+ F AYW + W+ W+
Sbjct: 282 IAEEFGFSLAYWEFCAGFGLYDRWTKTWI 310
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Length = 376 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 4e-30
Identities = 52/312 (16%), Positives = 94/312 (30%), Gaps = 40/312 (12%)
Query: 126 NIVSTLRGEYQITNGFGPDKAPQVLQDHWDS-YITDEDFKFLSSNGINAVRIPVGWWIAN 184
N+ +T+ + + D+ + W + T++ FK L N N RIP W
Sbjct: 32 NLGNTMDAQCIEYLNYEKDQTAS--ETCWGNPKTTEDMFKVLIDNQFNVFRIPTTWSGHF 89
Query: 185 DPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN 244
P K + D+ K G VI++LH H F E D+
Sbjct: 90 GEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLH----------HETWNHAFSETLDTA 139
Query: 245 VADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLKSYYKAGYDA 294
+ +A + + E +NEP D + +
Sbjct: 140 KEILEKIWSQIAEEFKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAMNAVFLKT 199
Query: 295 VRKY---TSTAYVIMSNRLGPADHKELLSFASGL--SRVVIDVHYYNLFSNNFNGLNVQQ 349
VR ++++ + +F +V+ VH Y + NF N +
Sbjct: 200 VRSAGGNNPKRHLMIPPYAAACNENSFNNFIFPEDDDKVIASVHAYAPY--NFALNNGEG 257
Query: 350 NIDYVNNQRASDLGAVT-------TSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDV 402
+D + DL G +GE+ + + + F ++
Sbjct: 258 AVDKFDAAGKRDLEWNINLMKKRFVDQGIPMILGEYGAMNRDNEEDRATWAEFYMEKVTA 317
Query: 403 YGRATFGWAYWA 414
G +W
Sbjct: 318 MG---VPQIWWD 326
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Length = 305 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 9e-30
Identities = 41/285 (14%), Positives = 89/285 (31%), Gaps = 37/285 (12%)
Query: 141 FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVL 200
FG P V + + L S G+N R+P + L
Sbjct: 16 FGSQNLPGVEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADL 74
Query: 201 DNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDF---LAA 257
+ + G +VD H + + +S ++ F +A+
Sbjct: 75 IATVNAITQKGAYAVVDPHN----------------YGRYYNSIISSPSDFETFWKTVAS 118
Query: 258 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM-------SNRL 310
++A+ P + + NE + + +A D +R +T+ I
Sbjct: 119 QFASNPLV-IFDTDNEYHDMDQT--LVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWT 175
Query: 311 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG 370
+ + S +++ ++H Y ++ +G + + +R + +NG
Sbjct: 176 WTNVNDNMKSLTDPSDKIIYEMHQY--LDSDGSGTSATCVSSTIGQERITSATQWLRANG 233
Query: 371 PLTFVGEWTCEWNVKDASK-QDYQRFANAQLDVYGRATFGWAYWA 414
+GE+ + + + DV+ G +WA
Sbjct: 234 KKGIIGEFAGGADNVCETAITGMLDYMAQNTDVW----TGAIWWA 274
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Length = 358 | Back alignment and structure |
|---|
Score = 115 bits (288), Expect = 8e-29
Identities = 55/319 (17%), Positives = 102/319 (31%), Gaps = 54/319 (16%)
Query: 130 TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP 189
+ G N FG + V+ W + S G N +R+P I T P
Sbjct: 22 RIAG----INWFGFETCNYVVHGLWSRDY-RSMLDQIKSLGYNTIRLPYSDDILKPGTMP 76
Query: 190 KPFVGGSS----------KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239
+V+D +A + G+++I+D H S
Sbjct: 77 NSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSA----------L 126
Query: 240 WGDS--NVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDT-----LKSYYKAGY 292
W S + A ++ + LA RY P++ +L NEP P + +
Sbjct: 127 WYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAG 186
Query: 293 DAVRKYTSTAYVIM--------------SNRLGPADHKELLSFASGLSRVVIDVHYYNLF 338
+AV + + N G + +L+ +R+V H Y
Sbjct: 187 NAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVP---NRLVYSAHDYATS 243
Query: 339 SNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANA 398
+ + + + G + N ++GE+ ++ + Q + +
Sbjct: 244 VYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEFG--TTLQSTTDQTWLKTLVQ 301
Query: 399 QLDV---YGRATFGWAYWA 414
L YG +F W +W+
Sbjct: 302 YLRPTAQYGADSFQWTFWS 320
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Length = 395 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 8e-28
Identities = 51/305 (16%), Positives = 86/305 (28%), Gaps = 42/305 (13%)
Query: 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV 216
+T E K + + G ++RIPV + P + D+A G+ VI+
Sbjct: 69 TVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVII 128
Query: 217 DLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276
++H + + V +A +++N E +NE
Sbjct: 129 NIHGDGYNSVQGGWL---LVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESMNEVFD 185
Query: 277 PG------VALDTLKSYYKAGYDAVRK----------------YTSTAYVIMSNRLGPAD 314
L +Y + D VR+ V P D
Sbjct: 186 GNYGNPNSAYYTNLNAYNQIFVDTVRQTGGNNNARWLLVPGWNTNIDYTVGNYGFTLPTD 245
Query: 315 HKELLSFASGLSRVVIDVHYYN--LFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPL 372
+ + S R++I HYY+ F+ NG Q N + S G
Sbjct: 246 NYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAKKSTWGQEDYLESQF 305
Query: 373 T-------------FVGEWTCEWNVKDASKQDYQR--FANAQLDVYGRATFGWAYWAHKC 417
+GE+ S + R +A A + YW +
Sbjct: 306 KSMYDKFVTQGYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKKYKMVPVYWDNGH 365
Query: 418 EANHW 422
H
Sbjct: 366 NGQHG 370
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Length = 345 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 3e-26
Identities = 45/301 (14%), Positives = 86/301 (28%), Gaps = 35/301 (11%)
Query: 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 211
+ + T + G N +R+PV W P K ++ ++A
Sbjct: 37 NWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND 96
Query: 212 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 271
+ VI++LH + A V +A + E +
Sbjct: 97 MYVIINLHHENEWLKPFYAN---------EAQVKAQLTKVWTQIANNFKKYGDHLIFETM 147
Query: 272 NEPLAPGV----------ALDTLKSYYKAGYDAVRK---YTSTAYVIMSNRLGPADHKEL 318
NEP G + + Y +A+R +T Y+++ A +
Sbjct: 148 NEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTI 207
Query: 319 LSFASGL--SRVVIDVHYYNLFSNNFNGLNVQQ-NIDYVNNQRASDLGAVTT---SNGPL 372
S+V++ +H Y+ + + DY + S+ AV NG
Sbjct: 208 NDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSLDSEFDAVYNKFVKNGRA 267
Query: 373 TFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGY 432
+GE A++ + + G +W + G
Sbjct: 268 VVIGEMGSINKNNTAARVTHAEYYAKSAKARG---LTPIWWD----NGYSVAGKAETFGI 320
Query: 433 I 433
Sbjct: 321 F 321
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Length = 327 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-26
Identities = 43/265 (16%), Positives = 83/265 (31%), Gaps = 40/265 (15%)
Query: 153 HWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 211
+ Y+ + K+L + GI R + P + A + A++ G
Sbjct: 64 WYGEYVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVK-----NKVKEAVEAAKELG 118
Query: 212 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 271
+ VI+D H + N +++ Y N P++ E+
Sbjct: 119 IYVIIDWHILNDGNP---------------NQNKEKAKEFFKEMSSLYGNTPNV-IYEIA 162
Query: 272 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 331
NEP +K Y + +RK +I+ D + + V+
Sbjct: 163 NEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVNDAADDQLKDANVMYA 222
Query: 332 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 391
+H+Y +G ++ +Y ++ A P+ FV EW + +
Sbjct: 223 LHFY----AGTHGQFLRDKANYALSKGA-----------PI-FVTEWG--TSDASGNGGV 264
Query: 392 YQRFANAQLDVYGRATFGWAYWAHK 416
+ + L T W W
Sbjct: 265 FLDQSREWLKYLDSKTISWVNWNLS 289
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Length = 306 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-25
Identities = 48/276 (17%), Positives = 95/276 (34%), Gaps = 39/276 (14%)
Query: 152 DHWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKY 210
+D +TD L+ + + +R+ + T P+ G + + D A
Sbjct: 37 QWFDHCLTDSSLDALAYDWKADIIRLSMYIQEDGYETNPR----GFTDRMHQLIDMATAR 92
Query: 211 GVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIEL 270
G+ VIVD H N+ +A R+A++ ++ E+
Sbjct: 93 GLYVIVDWHILTPGDPH---------------YNLDRAKTFFAEIAQRHASKTNV-LYEI 136
Query: 271 INEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI-MSNRLGPADHKELLSFASGLSRVV 329
NEP GV+ ++KSY + +R+ + +I + E A + V
Sbjct: 137 ANEPN--GVSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPV 194
Query: 330 IDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW-TCEWNVKDAS 388
+ F +F + + N + + P+ FV E+ T + A+
Sbjct: 195 NASNIMYAF--HFYAASHRDNYLNALREASELF--------PV-FVTEFGTETYTGDGAN 243
Query: 389 KQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSL 424
A+ +D+ GW W + + ++
Sbjct: 244 DFQM---ADRYIDLMAERKIGWTKWNYSDDFRSGAV 276
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Length = 340 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 4e-25
Identities = 49/302 (16%), Positives = 99/302 (32%), Gaps = 34/302 (11%)
Query: 126 NIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIAND 185
+ T G + + P + + F++ +G+ R+PVGW +
Sbjct: 14 DFGCTTDGTCVTSKVYPP--LKNFTGSNNYPDGIGQMQHFVNEDGMTIFRLPVGWQYLVN 71
Query: 186 PTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNV 245
S D G IVD+H NG G
Sbjct: 72 NNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNY-ARWNGGIIG--------QGGPTN 122
Query: 246 ADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 305
A ++ LA++YA++ + ++NEP V ++T + + A+R +T+ I
Sbjct: 123 AQFTSLWSQLASKYASQSRV-WFGIMNEPH--DVNINTWAATVQEVVTAIRNAGATSQFI 179
Query: 306 M-------SNRLGPADH-----KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDY 353
S +D ++ + + ++ DVH Y ++ +G + + +
Sbjct: 180 SLPGNDWQSAGAFISDGSAAALSQVTNPDGSTTNLIFDVHKY--LDSDNSGTHAECTTNN 237
Query: 354 VNNQRASDLGAVTTSNGPLTFVGEW-TCEWNVKDASKQDYQRFANAQLDVYGRATFGWAY 412
++ + + +N + E ++ N DVY G+
Sbjct: 238 IDGAFSPLATWLRQNNRQA-ILTETGGGNVQSCIQDMCQQIQYLNQNSDVY----LGYVG 292
Query: 413 WA 414
W
Sbjct: 293 WG 294
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Length = 303 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 1e-23
Identities = 45/265 (16%), Positives = 83/265 (31%), Gaps = 41/265 (15%)
Query: 154 WDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 212
+ ++ E K+L + GIN R + P + + A + A +
Sbjct: 40 YGQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVK-----EKVKEAVEAAIDLDI 94
Query: 213 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 272
VI+D H + + + D ++ Y + P++ E+ N
Sbjct: 95 YVIIDWHILSDNDP---------------NIYKEEAKDFFDEMSELYGDYPNV-IYEIAN 138
Query: 273 EPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 331
EP V + +K Y + +R +I+ D V+
Sbjct: 139 EPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYA 198
Query: 332 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 391
H+Y +G N++ +DY +Q A + FV EW +
Sbjct: 199 FHFY----AGTHGQNLRDQVDYALDQGA-----------AI-FVSEWG--TSAATGDGGV 240
Query: 392 YQRFANAQLDVYGRATFGWAYWAHK 416
+ A +D WA W+
Sbjct: 241 FLDEAQVWIDFMDERNLSWANWSLT 265
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Length = 302 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 2e-21
Identities = 32/270 (11%), Positives = 75/270 (27%), Gaps = 47/270 (17%)
Query: 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 212
H + F + S+G N VR+ + + P + N ++ +
Sbjct: 28 HNWYPQHTQAFADIKSHGANTVRVVLSNGVRWSKNGPS--------DVANVISLCKQNRL 79
Query: 213 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 272
++++H G + S W + L + I + N
Sbjct: 80 ICMLEVHDTTGYGEQSGASTLDQAVDYWIE------------LKSVLQGEEDYVLINIGN 127
Query: 273 EPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVI-------MSNRLGPADHKELLSFASG 324
EP + + A +R ++ ++ + + +
Sbjct: 128 EPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDP 187
Query: 325 LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 384
V +H Y ++S + +++ N PL +G E+
Sbjct: 188 TGNTVFSIHMYGVYS---QASTITSYLEHFVNA-----------GLPL-IIG----EFGH 228
Query: 385 KDASKQDYQRFANAQLDVYGRATFGWAYWA 414
+ + A+ + GW++
Sbjct: 229 DHSDGNPDEDTIMAEAERLKLGYIGWSWSG 258
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Length = 380 | Back alignment and structure |
|---|
Score = 94.0 bits (233), Expect = 3e-21
Identities = 46/310 (14%), Positives = 89/310 (28%), Gaps = 43/310 (13%)
Query: 138 TNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS 197
NG T + + G N VRIPV W
Sbjct: 42 FNGTNITNELDYETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSG-SDYKISDVWM 100
Query: 198 KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 257
+ ++ + VI++ H G S+ S+ +V +AA
Sbjct: 101 NRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYM------ASSKKYITSVWAQIAA 154
Query: 258 RYANRPSLAAIELINEPLAPGV---------------ALDTLKSYYKAGYDAVRKY--TS 300
R+AN E +NEP G +++ + + + VR +
Sbjct: 155 RFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKN 214
Query: 301 TAYVIM-------SNRLGPADHKELLSFASGLSRVVIDVHYYN--LFSNNFNGLNVQQNI 351
+ +M + + + +++++ VH Y F+
Sbjct: 215 ASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAW 274
Query: 352 DYVNNQRASDLGAVT-------TSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYG 404
+ +++ S++ TS G +GE ++ +Y + AQ G
Sbjct: 275 NINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYVAQAKARG 334
Query: 405 RATFGWAYWA 414
W
Sbjct: 335 ---ILCILWD 341
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Length = 293 | Back alignment and structure |
|---|
Score = 91.1 bits (226), Expect = 8e-21
Identities = 38/264 (14%), Positives = 76/264 (28%), Gaps = 42/264 (15%)
Query: 155 DSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 213
+ + T E + +R +G + G+ LD + A +
Sbjct: 36 EKFYTAETVAKAKTEFNATLIRAAIGHG-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMY 94
Query: 214 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 273
VI+D H+ + A V + +A +Y ++ E+ NE
Sbjct: 95 VIIDFHSHEAHTDQ------------------ATAVRFFEDVATKYGQYDNV-IYEIYNE 135
Query: 274 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 333
PL + +K Y + D +R +++ D + + +H
Sbjct: 136 PLQISWV-NDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLH 194
Query: 334 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW-TCEWNVKDASKQDY 392
+Y +G + + + L F EW T + +
Sbjct: 195 FY----AGTHGQSYRNKAQTALDNGI-----------AL-FATEWGTVNADGNGGVNINE 238
Query: 393 QRFANAQLDVYGRATFGWAYWAHK 416
+A + + A WA
Sbjct: 239 ---TDAWMAFFKTNNISHANWALN 259
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Length = 458 | Back alignment and structure |
|---|
Score = 92.6 bits (229), Expect = 1e-20
Identities = 49/374 (13%), Positives = 105/374 (28%), Gaps = 60/374 (16%)
Query: 90 LSASNGMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQIT--NGFGPDKAP 147
L+ G + +E ++ +++ +N+ S + N FG +
Sbjct: 16 LAGLFGQVVPVYAENTTYQTPTGIYYEVRGDTIYMINVTSGEETPIHLFGVNWFGFETPN 75
Query: 148 QVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK-------PFVGGSS--K 198
V+ W ++ + S G NA+R+P T P P + G +
Sbjct: 76 HVVHGLWKRNW-EDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQ 134
Query: 199 VLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAAR 258
+++ A G+ V++D H + + D + D + +A R
Sbjct: 135 IMEKIIKKAGDLGIFVLLDYHRIGCTHI--------EPLWYTEDFSEEDFINTWIEVAKR 186
Query: 259 YANRPSLAAIELINEPLAPGVALDT-----------------LKSYYKAGYDAVRKYTST 301
+ ++ +L NEP + + A+ K
Sbjct: 187 FGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVAPH 246
Query: 302 AYVIMS-------------------NRLGPADHKELLSFASGLSRVVIDVHYYN-LFSNN 341
+ + G + +++V H + N
Sbjct: 247 WLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVYSPHVFGPDVYNQ 306
Query: 342 FNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLD 401
+ D + + G V G +GE+ ++ + N +D
Sbjct: 307 PYFGPAKGFPDNLPDIWYHHFGYVKLELGYSVVIGEFGGKYG--HGGDPRDVIWQNKLVD 364
Query: 402 VYGRAT-FGWAYWA 414
+ YW+
Sbjct: 365 WMIENKFCDFFYWS 378
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Length = 294 | Back alignment and structure |
|---|
Score = 90.3 bits (224), Expect = 1e-20
Identities = 38/267 (14%), Positives = 74/267 (27%), Gaps = 53/267 (19%)
Query: 154 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 213
W ++ G N +RI + + + + AE+ +
Sbjct: 28 WYKDTASTAIPAIAEQGANTIRIVLSDGGQWEKDDID--------TIREVIELAEQNKMV 79
Query: 214 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 273
+V++H A G + ++ + D + E + + I + NE
Sbjct: 80 AVVEVHDATGRDSRSDLNRAVDYWIE---------------MKDALIGKEDTVIINIANE 124
Query: 274 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFASGLSR 327
Y +R T +++ D+ + + A L
Sbjct: 125 WY-GSWDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKN 183
Query: 328 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDA 387
+ +H Y + V+ NID V +Q + L +GE+
Sbjct: 184 TMFSIHMYE--YAGGDANTVRSNIDRVIDQ-----------DLAL-VIGEFGHRHT---- 225
Query: 388 SKQDYQRFANAQLDVYGRATFGWAYWA 414
D L GW W+
Sbjct: 226 -DVDEDTI----LSYSEETGTGWLAWS 247
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Length = 291 | Back alignment and structure |
|---|
Score = 89.6 bits (222), Expect = 3e-20
Identities = 43/266 (16%), Positives = 83/266 (31%), Gaps = 44/266 (16%)
Query: 153 HWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 211
+ + T + L + + VR +G + G+ ++ D A
Sbjct: 34 GGEKFYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPA---GNKAKVERVVDAAIAND 90
Query: 212 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 271
+ I+ H+ N ++ + +A +Y N+P++ E+
Sbjct: 91 MYAIIGWHSHSAEN------------------NRSEAIRFFQEMARKYGNKPNV-IYEIY 131
Query: 272 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 331
NEPL + +T+K Y +A A+R +I+ + E +
Sbjct: 132 NEPLQVSWS-NTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYT 190
Query: 332 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW-TCEWNVKDASKQ 390
+H+Y +G +++ N L FV EW T + Q
Sbjct: 191 LHFY----AGTHGESLRNKARQALNN-----------GIAL-FVTEWGTVNADGNGGVNQ 234
Query: 391 DYQRFANAQLDVYGRATFGWAYWAHK 416
+A + A WA
Sbjct: 235 TE---TDAWVTFMRDNNISNANWALN 257
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Length = 345 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 1e-19
Identities = 40/284 (14%), Positives = 81/284 (28%), Gaps = 51/284 (17%)
Query: 154 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 213
W ++ G N +RI + + + + AE+ +
Sbjct: 51 WYKDTASTAIPAIAEQGANTIRIVLSDGGQWEKDDID--------TVREVIELAEQNKMV 102
Query: 214 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 273
+V++H A G + ++ D + E + + I + NE
Sbjct: 103 AVVEVHDATGRDSRSDLDRAVDYWIE---------------MKDALIGKEDTVIINIANE 147
Query: 274 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFASGLSR 327
Y +R T +++ D+ + + A L
Sbjct: 148 WY-GSWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKN 206
Query: 328 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDA 387
+ +H Y + V+ NID V +Q + L +GE+ D
Sbjct: 207 TIFSIHMYE--YAGGDANTVRSNIDRVIDQ-----------DLAL-VIGEFGHRHTDGDV 252
Query: 388 SKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENG 431
+ ++ GW W+ K + W + E+
Sbjct: 253 DEDTILSYSEET-------GTGWLAWSWKGNSAEWDYLDLSEDW 289
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Length = 481 | Back alignment and structure |
|---|
Score = 88.1 bits (217), Expect = 5e-19
Identities = 56/343 (16%), Positives = 102/343 (29%), Gaps = 72/343 (20%)
Query: 130 TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP 189
LRG N K+ D + + + + G N VR + W P
Sbjct: 46 ILRG----FNTASSAKSAP---DGMPQFTEADLAREYADMGTNFVRFLISWRSVEPA--P 96
Query: 190 KPFVGGSSKVLDNAFDWAEKYGVKVIVDLH-------AAPGSQNGNEHSATRDGFQEW-- 240
+ +++ W + G KV++D+H P +GN A +G W
Sbjct: 97 GVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIGNGAPAWAT 156
Query: 241 -----------------------------------GDSNVADTVAVIDFLAARYANRPSL 265
V +A R+A+ ++
Sbjct: 157 YMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAV 216
Query: 266 AAIELINEPLA-----PGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPAD 314
A +L+NEP P L + Y+ DA+R+ +V + N+ P+
Sbjct: 217 VAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSG 276
Query: 315 HKELLSFASGLSRVVIDVHYYNL---FSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGP 371
++ +G R+ H Y L + GL ++ RA+
Sbjct: 277 LTKIDDPRAGQQRIAYCPHLYPLPLDIGDGHEGLARTLTDVTIDAWRANTAHTARVLGDV 336
Query: 372 LTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWA 414
+G + D + + + G +YW+
Sbjct: 337 PIILGSFGL-----DTTLPGARDYIERVYGTAREMGAGVSYWS 374
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Length = 364 | Back alignment and structure |
|---|
Score = 84.7 bits (209), Expect = 3e-18
Identities = 39/274 (14%), Positives = 86/274 (31%), Gaps = 36/274 (13%)
Query: 154 WDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 212
+ + + F LS++ G N +R+ + T P+ ++ + A ++ +
Sbjct: 50 FGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-----DLVYEGIELAFEHDM 104
Query: 213 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAI--EL 270
VIVD H + + F + + +A Y + P I EL
Sbjct: 105 YVIVDWHVHAPGDPRADVYSGAYDF--FEE------------IADHYKDHPKNHYIIWEL 150
Query: 271 INEPLAPG----------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS 320
NEP + +K Y + + +R+ ++ +
Sbjct: 151 ANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWS-QRPDLSAD 209
Query: 321 FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTC 380
++ VH+Y + + + +++ + + F EW
Sbjct: 210 NPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAV-FATEWG- 267
Query: 381 EWNVKDASKQDYQRFANAQLDVYGRATFGWAYWA 414
+ + Y A+ L+ + WA W+
Sbjct: 268 -TSQANGDGGPYFDEADVWLNFLNKHNISWANWS 300
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 84.8 bits (209), Expect = 6e-18
Identities = 39/182 (21%), Positives = 74/182 (40%), Gaps = 17/182 (9%)
Query: 7 KYIAAESGGGTIVVANRTSASGWETFRLWRVNET-FYNFRVNNKQFIGLENQGQGNGLVA 65
+ ++ G + AN+ + ETF+L +T FR + ++ L G G+ +
Sbjct: 271 RNVSTRQGMD--LSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATG---GVQS 325
Query: 66 VSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDPSVFKL 125
+++ S F I +D R+ L ASNG F+ + +L A ++ +
Sbjct: 326 TASSKNASCYFDIEWRDR---RITLRASNGKFVTSKKNGQLAASVETAGDSELFLMKLIN 382
Query: 126 NIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG--WWIA 183
+ RGE+ G K L + SY + F+ ++G ++ G W +
Sbjct: 383 RPIIVFRGEHGF---IGCRKVTGTLDANRSSY---DVFQLEFNDGAYNIKDSTGKYWTVG 436
Query: 184 ND 185
+D
Sbjct: 437 SD 438
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 45.1 bits (106), Expect = 3e-05
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 7 KYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAV 66
K++ ++ G + A+ +A E F + +N FR + FIG + G +
Sbjct: 353 KFVTSKKNGQ--LAASVETAGDSELFLMKLINRPIIVFRGEHG-FIGCR---KVTGTLDA 406
Query: 67 SNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTAD 109
N + Y + FQ+ DG + S G + S++ +T+
Sbjct: 407 -NRSSY-DVFQLEFNDG---AYNIKDSTGKYWTVGSDSAVTSS 444
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Length = 464 | Back alignment and structure |
|---|
Score = 82.8 bits (204), Expect = 2e-17
Identities = 39/277 (14%), Positives = 78/277 (28%), Gaps = 48/277 (17%)
Query: 154 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 213
W + +++ G N VRI + + + N AE +
Sbjct: 36 WYKDQATTAIEGIANTGANTVRIVLSDGGQWTKDDIQ--------TVRNLISLAEDNNLV 87
Query: 214 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 273
++++H A G + + D + E + + + I + NE
Sbjct: 88 AVLEVHDATGYDSIASLNRAVDYWIE---------------MRSALIGKEDTVIINIANE 132
Query: 274 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFASGLSR 327
YK +R +++ D+ + A
Sbjct: 133 WFGSWDG-AAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRN 191
Query: 328 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDA 387
+ +H Y N V+ NID V NQ L +GE+ D
Sbjct: 192 TMFSIHMYE--YAGGNASQVRTNIDRVLNQDL-----------AL-VIGEFGHRHTNGDV 237
Query: 388 SKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSL 424
+ ++ + + W++ + E + L
Sbjct: 238 DESTIMSYSEQRGVGW----LAWSWKGNGPEWEYLDL 270
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Length = 353 | Back alignment and structure |
|---|
Score = 79.0 bits (194), Expect = 3e-16
Identities = 17/141 (12%), Positives = 42/141 (29%), Gaps = 10/141 (7%)
Query: 139 NGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPT-----PPKPFV 193
+ D ++ + + S+G N+VR+ + + P
Sbjct: 29 VNYARDFGHNQYSKGKSTF--ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGID 86
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253
+ A+++ + + L Q+ H + + +
Sbjct: 87 NTLISDMRAYLHAAQRHNILIFFTLWNGAVKQST--HYRLNGLMVDTRKLQ-SYIDHALK 143
Query: 254 FLAARYANRPSLAAIELINEP 274
+A N +L +++NEP
Sbjct: 144 PMANALKNEKALGGWDIMNEP 164
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Length = 491 | Back alignment and structure |
|---|
Score = 74.3 bits (181), Expect = 2e-14
Identities = 38/287 (13%), Positives = 77/287 (26%), Gaps = 39/287 (13%)
Query: 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 212
W + + + G NAV + + P P G + +D + + G+
Sbjct: 35 EWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGL 94
Query: 213 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 272
+++ + + N N RD ++ A RYA + E+ N
Sbjct: 95 YLVITIGNGANNGNHN-AQWARDFWKF---------------YAPRYAKETHV-LYEIHN 137
Query: 273 EPLAPG-------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 325
EP+A G Y +R Y V++ + G
Sbjct: 138 EPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGG-------KGGA 190
Query: 326 SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT--TSNGPLTFVGEWTCEWN 383
+ + D+ +N +N + N A A T+ + +
Sbjct: 191 AEALKDIRAFNKAVFGN------ENAVWTNEAVAFHGYAGWQETTIAVEELLKAGYPCFM 244
Query: 384 VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIEN 430
+ A +++ W + +
Sbjct: 245 TEYAGGAWGSGMGGLDVELTYELERLGVSWLTFQYIPPTGVSDDVTK 291
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Length = 344 | Back alignment and structure |
|---|
Score = 68.7 bits (167), Expect = 5e-13
Identities = 42/276 (15%), Positives = 81/276 (29%), Gaps = 28/276 (10%)
Query: 160 DEDFKFLSSNGINAVRIPV-------------GWWIANDPTPPKPFVGGSSKVLDNAFDW 206
D F +SS+G+ VR+ + + + LD
Sbjct: 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQS 98
Query: 207 AEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE---WGDSNV-ADTVAVIDFLAARYANR 262
AE++ +K+I+ G G + ++ + + +RYAN
Sbjct: 99 AEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANS 158
Query: 263 PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYV-IMSNRLGPADHKELLSF 321
++ A EL NEP G + D + + + V+ S V + LG + +
Sbjct: 159 TAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPY 218
Query: 322 ASGLSRVVIDVHYYN---LFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW 378
G + + + N + N + A + P
Sbjct: 219 TYGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNYTWGNGWIQTHAAACLAAGKPC-----V 273
Query: 379 TCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWA 414
E+ + + + L G G +W
Sbjct: 274 FEEYGAQQNPCTNEAPWQTTSLTTRGMG--GDMFWQ 307
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} Length = 155 | Back alignment and structure |
|---|
Score = 61.6 bits (149), Expect = 1e-11
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 7 KYIAAESGG----GTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNG 62
YI A G G S E F +++++ + +++G+ + G
Sbjct: 35 AYIHALDNGLFTLGAPHREVDEGPSPPEQFTAVKLSDSRIALKSGYGKYLGINSDGL--- 91
Query: 63 LVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTAD 109
+V S+ G E ++ V +DG ++ L ASN FI+ + A
Sbjct: 92 VVGRSDAIGPREQWEPVFQDG---KMALLASNSCFIRCNEAGDIEAK 135
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} Length = 155 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 1e-05
Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 7 KYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAV 66
KY+ S G +VV + E + + N+ FI G + A
Sbjct: 82 KYLGINSDG--LVVGRSDAIGPREQWEPVFQDGKMALLASNSC-FIRCNEAGD---IEAK 135
Query: 67 SNTAGYSETFQI 78
+ TAG E +I
Sbjct: 136 NKTAGEEEMIKI 147
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Length = 399 | Back alignment and structure |
|---|
Score = 57.1 bits (137), Expect = 4e-09
Identities = 48/249 (19%), Positives = 79/249 (31%), Gaps = 37/249 (14%)
Query: 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS---KVLDNAFDWAEK 209
+ +S + FK L G+N VR+ + W + GG++ K + A
Sbjct: 44 YNESGKKQDIFKTLKEAGVNYVRVRI--WNDPYDANGNGYGGGNNDLEKAIQIG-KRATA 100
Query: 210 YGVKVIVDLH-----AAPGSQNGNEHSATRDGFQEWGDSNVADTVA--VIDFLAARYANR 262
G+K++ D H A P Q + A + + + L A A
Sbjct: 101 NGMKLLADFHYSDFWADPAKQKAPKAWANLNF------EDKKTALYQYTKQSLKAMKAAG 154
Query: 263 PSLAAIELINEP---LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 319
+ +++ NE LA + + AG AVR+ S V + P
Sbjct: 155 IDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFT-NPETSGRYA 213
Query: 320 SFASGLSRV-----VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTF 374
A L R V YY + N+ + V + + TS
Sbjct: 214 WIAETLHRHHVDYDVFASSYYPFWHGTLK--NLTSVLTSVADTYGKKVMVAETSYT---- 267
Query: 375 VGEWTCEWN 383
+T E
Sbjct: 268 ---YTAEDG 273
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Length = 373 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 2e-07
Identities = 45/301 (14%), Positives = 85/301 (28%), Gaps = 42/301 (13%)
Query: 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--KVLDNAFDWAEK 209
D F+ S +N R + P P V + LD A+K
Sbjct: 37 DPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKK 96
Query: 210 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVAD----------TVAVIDFLAAR- 258
YG+ +I+ L + G + + ++ D + + R
Sbjct: 97 YGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRV 156
Query: 259 -------YANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVI----- 305
Y + P++ + ELINEP P ++ T +++ ++ S +
Sbjct: 157 NTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEG 216
Query: 306 ----MSNRLGPADHKELLSFASGLSRVVIDV---HYYNLFSNNFNGLNVQQNIDYVNNQR 358
+ P + +F S ID H Y + GL + + +
Sbjct: 217 FYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYP--NQWLPGLTQEAQDKWASQWI 274
Query: 359 ASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVY------GRATFGWAY 412
+ PL + E+ + + G G +
Sbjct: 275 QVHIDDSKMLKKPL-LIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLF 333
Query: 413 W 413
W
Sbjct: 334 W 334
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Length = 440 | Back alignment and structure |
|---|
Score = 52.4 bits (124), Expect = 2e-07
Identities = 36/315 (11%), Positives = 76/315 (24%), Gaps = 54/315 (17%)
Query: 151 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--------KVLDN 202
+ D ++ L + G+N +R+ + + KP V + LD
Sbjct: 56 NEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDY 115
Query: 203 AFDWAEKYGVKVIVDLH-------------AAPGSQNGNEHSATRDGFQEWGDSNVADTV 249
K + V++ + A + + + T + S
Sbjct: 116 LLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRS 175
Query: 250 AVI----------------DFLAARYANRPSLAAIELINEPLAPGVA-----LDTLKSYY 288
Y + ++ + +L NEP +
Sbjct: 176 EKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWV 235
Query: 289 KAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID---VHYY----NLFSNN 341
A ++ + V + ++ F + ID H + + F
Sbjct: 236 HAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKT 295
Query: 342 FNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLD 401
+ N + + N PL E+ + D
Sbjct: 296 KPAETWPSAWEKAQNYMRAHIDVAKQLNKPL-----VLEEFGLDRDMGSYAMDSTTEYRD 350
Query: 402 VYGRATFGWAYWAHK 416
Y R F + +
Sbjct: 351 NYFRGVFELMLASLE 365
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Length = 334 | Back alignment and structure |
|---|
Score = 47.0 bits (111), Expect = 6e-06
Identities = 41/272 (15%), Positives = 81/272 (29%), Gaps = 45/272 (16%)
Query: 159 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218
T L+ GIN++R V W+ P L+ A + G+ + +DL
Sbjct: 29 TQALETILADAGINSIRQRV--WV-----NPSDGSYDLDYNLELA-KRVKAAGMSLYLDL 80
Query: 219 H-----AAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 273
H A P Q +T D + + + N + I + NE
Sbjct: 81 HLSDTWADPSDQTTPSGWSTTDLGTLKWQ--LYNYTL--EVCNTFAENDIDIEIISIGNE 136
Query: 274 -------PLAPGVALDTLKSYYKAGYDAVRKYT-STAYVIMSNRLGPADHKELLSFASGL 325
PL + + + +G V+ +T IM + + F +
Sbjct: 137 IRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETV 196
Query: 326 SRV---------VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 376
V YY +S + +++ ++ + + + V
Sbjct: 197 LATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPV-----------VVV 245
Query: 377 EWTCEWNVKDASKQDYQRFANAQLDVYGRATF 408
E + + + ++ V G+ F
Sbjct: 246 ETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEF 277
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Length = 383 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 4e-05
Identities = 39/309 (12%), Positives = 86/309 (27%), Gaps = 53/309 (17%)
Query: 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--------------- 197
+ + + D + GI +RI + ++
Sbjct: 39 YKSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNG 98
Query: 198 -KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE------HSATRDGF------QEWGDSN 244
+ LD A++ G+K+I+ L G D F +E
Sbjct: 99 FERLDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKY 158
Query: 245 VADTVA-VIDFLAARYANRPSLAAIELINEP-LAPGVALDTLKSYYKAGYDAVRKYTSTA 302
V+ + V + Y P++ A EL NE + +TL + K ++
Sbjct: 159 VSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNH 218
Query: 303 YVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDL 362
V + + ++++ + + Y ++ L + +D+
Sbjct: 219 LVAVGDEGFFSNYEGFKPYGGEA-----EWAYNGWSGVDWKKLLSIETVDFGTFHLYPS- 272
Query: 363 GAVTTSNGPLTFVGEWTC----------------EWNVKDASKQDYQRFANAQLD-VYGR 405
+ + +W E+ + ++ + D VY
Sbjct: 273 HWGVSPENYAQWGAKWIEDHIKIAKEIGKPVVLEEYGIPKSAPVNRTAIYRLWNDLVYDL 332
Query: 406 ATFGWAYWA 414
G +W
Sbjct: 333 GGDGAMFWM 341
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 | Back alignment and structure |
|---|
Score = 41.8 bits (97), Expect = 3e-04
Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 21/155 (13%)
Query: 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK-PFVGGSSKVLDNAFDWAEKY 210
+HW ED + + G++ VRI W +P P + + LD A
Sbjct: 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEW-----GWLDEAIATLAAE 63
Query: 211 GVKVIVDLH--------------AAPGSQNGN-EHSATRDGFQEWGDSNVADTVAVIDFL 255
G+KV++ P + G R + + ++ L
Sbjct: 64 GLKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLL 123
Query: 256 AARYANRPSLAAIELINEPLAPGVALDTLKSYYKA 290
A RY ++A + NE +A
Sbjct: 124 AERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEA 158
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 436 | |||
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 100.0 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 100.0 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 100.0 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 100.0 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 100.0 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 100.0 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 100.0 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 100.0 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 100.0 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 100.0 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 100.0 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 100.0 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 100.0 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 100.0 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 100.0 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 100.0 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 100.0 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 100.0 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 100.0 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 100.0 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 100.0 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 100.0 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 100.0 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 100.0 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 100.0 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 100.0 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 100.0 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 100.0 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 99.97 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 99.94 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 99.93 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 99.93 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 99.93 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 99.92 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 99.9 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 99.87 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 99.83 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 99.82 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 99.8 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 99.69 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 99.68 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 99.68 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.66 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 99.6 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 99.59 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.58 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.58 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 99.52 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 99.52 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 99.5 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 99.5 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 99.48 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 99.47 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 99.46 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.44 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 99.42 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 99.42 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.4 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 99.38 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.37 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 99.37 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 99.36 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 99.33 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 99.32 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.32 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 99.3 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 99.26 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 99.23 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 99.21 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 99.19 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 99.16 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 99.1 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 99.1 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.05 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 99.04 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 99.04 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.03 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 99.02 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 99.02 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.01 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 98.99 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 98.99 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 98.97 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 98.96 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 98.95 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 98.91 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 98.9 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 98.89 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 98.88 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 98.87 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 98.87 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 98.86 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.86 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 98.86 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 98.86 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 98.86 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 98.86 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 98.85 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 98.85 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 98.85 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 98.84 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 98.84 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 98.83 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 98.82 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 98.79 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.78 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.78 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 98.78 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 98.77 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 98.73 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 98.71 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 98.69 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 98.68 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 98.65 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 98.6 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 98.6 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 98.58 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 98.56 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.56 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 98.54 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 98.5 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 98.49 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.47 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 98.43 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 98.33 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.19 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 98.16 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 98.11 | |
| 3ug3_A | 504 | Alpha-L-arabinofuranosidase; TIM barrel, hydrolase | 98.1 | |
| 3vny_A | 488 | Beta-glucuronidase; TIM barrel, greek-KEY, glycosi | 98.09 | |
| 2vrq_A | 496 | Alpha-L-arabinofuranosidase; hydrolase, glycosidas | 98.04 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 97.98 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 97.92 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 97.9 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 97.89 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 97.84 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 97.49 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 96.91 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 96.87 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 96.79 | |
| 4aw7_A | 591 | GH86A beta-porphyranase; hydrolase, porphyran-hexa | 96.7 | |
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 96.52 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 96.44 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 96.42 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 96.4 | |
| 2yih_A | 524 | CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca | 96.24 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 96.18 | |
| 2vx5_A | 396 | Cellvibrio japonicus mannanase cjman26C; hydrolase | 96.06 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 96.0 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 95.79 | |
| 1jlx_A | 303 | Agglutinin, amaranthin, ACA; complex (lectin/sacch | 95.47 | |
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 95.43 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 95.33 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 95.24 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 95.19 | |
| 3ik2_A | 517 | Endoglucanase A; TIM-like barrel, hydrolase; 2.20A | 95.14 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 95.02 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 94.87 | |
| 3tp4_A | 475 | Computational design of enzyme; structural genomic | 94.84 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 94.84 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 94.83 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 94.81 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 94.54 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 94.5 | |
| 2e4t_A | 519 | Endoglucanase, xyloglucanase; TIM barrel, TIM-like | 94.5 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 94.21 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 94.2 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 94.18 | |
| 2v3g_A | 283 | Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich | 94.1 | |
| 3ii1_A | 535 | Cellulase; CELM2, glucanase-xyanase, glucanase, xy | 93.89 | |
| 1odz_A | 386 | Mannanase A; hydrolase, family 26, glycoside-hydro | 93.65 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 93.62 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 93.61 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 93.53 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 93.52 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 93.5 | |
| 4a4a_A | 914 | Alpha-N-acetylglucosaminidase family protein; hydr | 93.46 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 93.42 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 93.28 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 93.18 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 93.11 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 93.09 | |
| 1jlx_A | 303 | Agglutinin, amaranthin, ACA; complex (lectin/sacch | 92.98 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 92.97 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 92.95 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 92.89 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 92.8 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 92.71 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 92.39 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 92.31 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 92.14 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 92.03 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 91.92 | |
| 2fhf_A | 1083 | Pullulanase; multiple domain, beta-alpha-barrel, a | 91.91 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 91.88 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 91.87 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 91.85 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 91.81 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 91.76 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 91.73 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 91.63 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 91.59 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 91.58 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 91.41 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 91.32 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 91.14 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 91.04 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 91.0 | |
| 4aio_A | 884 | Limit dextrinase; hydrolase, pullulanase, glycosid | 90.98 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 90.91 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 90.72 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 90.49 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 90.37 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 90.33 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 90.18 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 89.88 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 89.66 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 89.53 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 88.95 | |
| 1hcd_A | 118 | Hisactophilin; actin binding; NMR {Dictyostelium d | 88.83 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 88.59 | |
| 2ddx_A | 333 | Beta-1,3-xylanase; glycoside hydrolase, TIM barrel | 88.57 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 88.51 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 87.89 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 87.57 | |
| 2ya1_A | 1014 | Putative alkaline amylopullulanase; hydrolase, gly | 87.04 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 87.02 | |
| 1iv8_A | 720 | Maltooligosyl trehalose synthase; beta alpha barre | 86.48 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 83.56 | |
| 3hje_A | 704 | 704AA long hypothetical glycosyltransferase; treha | 83.09 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 82.9 | |
| 1olt_A | 457 | Oxygen-independent coproporphyrinogen III oxidase; | 82.23 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 81.62 | |
| 2k8e_A | 130 | UPF0339 protein YEGP; protein structure initiative | 81.4 | |
| 3q7x_A | 132 | De novo designed beta-trefoil architecture with S | 81.15 |
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-60 Score=483.41 Aligned_cols=310 Identities=33% Similarity=0.588 Sum_probs=264.2
Q ss_pred CCCcccccc-c----ccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC
Q 013777 118 SDPSVFKLN-I----VSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF 192 (436)
Q Consensus 118 ~~ps~F~~~-~----~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~ 192 (436)
++||+|+.. + .....+||++|+.+|.+++.+++++||++||||+||+.||++|||+|||||+||.+ ++.+.+||
T Consensus 29 itps~f~~~~~~~~~~~~~~dE~~l~~~lG~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipi~~~~~-~~~~~~py 107 (399)
T 3n9k_A 29 MTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYWAF-QLLDNDPY 107 (399)
T ss_dssp TSGGGTGGGCBTTBCTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGT-CCCTTCCC
T ss_pred cCchhhhcccCccccCcccccHHHHHHHhCHHHHHHHHHHhhcccCcHHHHHHHHHcCCCEEEEcccHHHc-cCCCCCcc
Confidence 678888754 2 22467999999999999999999999999999999999999999999999999976 44455688
Q ss_pred ccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCC---CceeEE
Q 013777 193 VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANR---PSLAAI 268 (436)
Q Consensus 193 ~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~---~~v~g~ 268 (436)
..+.+++||++|++|+++||+||||||..||+||+++++|.. +...|. +.+.++++++|+.||+||+++ |.|++|
T Consensus 108 ~~~~~~~ld~vV~~a~~~Gl~VILDlH~~pG~qng~~~sG~~-~~~~w~~~~~~~~~~~~w~~iA~ry~~~~y~~~V~~~ 186 (399)
T 3n9k_A 108 VQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLR-DSYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGI 186 (399)
T ss_dssp CCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSST-TCCCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEE
T ss_pred chhHHHHHHHHHHHHHHCCCEEEEEecCCCcccccccCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhcccCCCceEEE
Confidence 777999999999999999999999999999999999999876 345676 678999999999999999999 999999
Q ss_pred EeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCC-CChhhhhccCCCCCcEEEEEeecCcCCCCCCCCCh
Q 013777 269 ELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGP-ADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNV 347 (436)
Q Consensus 269 eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~-~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~ 347 (436)
||+|||..+..+.+.|++||++++++||+++|+++|++++++.+ ..+..++.....++|+||++|+|.+|+.....++.
T Consensus 187 el~NEP~~~~~~~~~~~~~~~~a~~~IR~~~p~~~Iii~dg~~~~~~W~~~l~~~~~~~nvv~d~H~Y~~f~~~~~~~~~ 266 (399)
T 3n9k_A 187 ELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAAQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNI 266 (399)
T ss_dssp ESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCCSEEEEEECCSCSSHHHHTSCH
T ss_pred EeccCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCChHHHHhhcccccCCCCEEEEeccccCCCcccccCCH
Confidence 99999997556788999999999999999999999999988764 34555655434679999999999999866667889
Q ss_pred hhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC------------------------------------CcCHHH
Q 013777 348 QQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK------------------------------------DASKQD 391 (436)
Q Consensus 348 ~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~------------------------------------~~~~~~ 391 (436)
+++++.+|... . .+.+. ..|+|||||+++...+ ...++.
T Consensus 267 ~~~i~~~c~~~-~---~~~~~-~~~~ivGEwS~a~~dc~~~lng~~~g~r~~gt~~~~~~~g~c~~~~~~~~~~~~~k~~ 341 (399)
T 3n9k_A 267 NDHISVACNWG-W---DAKKE-SHWNVAGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTD 341 (399)
T ss_dssp HHHHHHHHHHH-H---HHHTC-SSEEEEEECCSCSSSCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCCHHHHHH
T ss_pred HHHHHHHHHHH-H---HHhcC-CCCEEEEecccccccchhhccCCCccccccccCCCCCcCCcCcCcCccccccHHHHHH
Confidence 99999998743 2 22333 3569999999875311 012467
Q ss_pred HHHHHHHHHHHHccCCCcEEEEceecCC-CCCChHHHHhCCCccc
Q 013777 392 YQRFANAQLDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 435 (436)
Q Consensus 392 ~~~~~~~q~~~~~~~~~Gw~~W~~k~~~-~~Ws~~~~~~~g~~~~ 435 (436)
+++|+++|+++|++ +.||+|||||+++ ++|||+.++++|+||.
T Consensus 342 ~~~f~~aQ~~~~e~-~~Gw~fWtwK~e~~~~W~~~~~~~~g~~p~ 385 (399)
T 3n9k_A 342 TRRYIEAQLDAFEY-TGGWVFWSWKTENAPEWSFQTLTYNGLFPQ 385 (399)
T ss_dssp HHHHHHHHHHHHHT-TTEEEESCSCCSSCGGGCHHHHHHTTCSCS
T ss_pred HHHHHHHHHHHHHc-CCcEEEeeeecCCCCCCCHHHHHhCCCcCC
Confidence 89999999999996 5599999999996 8999999999999985
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-56 Score=453.94 Aligned_cols=315 Identities=30% Similarity=0.562 Sum_probs=256.7
Q ss_pred CCCCCC----CCccccccccc-----c-cccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEecCcccc
Q 013777 113 SSWDDS----DPSVFKLNIVS-----T-LRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWI 182 (436)
Q Consensus 113 ~~W~~~----~ps~F~~~~~~-----~-~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~ 182 (436)
++|+.. +|++|...+.. . ..+||++|+.+|.+++..++++||++++|++||+.|+++|||+|||||+||.
T Consensus 19 GgwlvlE~~i~p~~f~~~~~~~~~~~~~~~dE~~l~~~lG~~~a~~~~~~hw~~~~te~d~~~i~~~G~N~VRipi~~~~ 98 (408)
T 1h4p_A 19 GGWLLLEPYITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWA 98 (408)
T ss_dssp TTSSSCCTTTSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred cchhhcccccCchhhhhhcccccccccccccHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEccCCHHH
Confidence 556554 55667554321 1 5889999999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCCCccc-hHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhC
Q 013777 183 ANDPTPPKPFVGG-SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYA 260 (436)
Q Consensus 183 ~~~~~~~~~~~~~-~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~ 260 (436)
+. +.+.+||..+ .+++||++|++|+++||+||||+|..||+||+++++|.. +...|. +.+.++++++|+.||+||+
T Consensus 99 ~~-~~~~~py~~~~~l~~ld~vv~~a~~~Gi~VilDlH~~pG~qng~~~sG~~-~~~~w~~~~~~~~~~~~w~~ia~ry~ 176 (408)
T 1h4p_A 99 FQ-ILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLR-DSYKFLEDSNLAVTINVLNYILKKYS 176 (408)
T ss_dssp TC-CCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSST-TCCCTTSHHHHHHHHHHHHHHHHHTT
T ss_pred cc-cCCCCCCccccHHHHHHHHHHHHHHCCCEEEEECCCCCCccCCccCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 64 4445678776 999999999999999999999999999999999988865 556787 7889999999999999999
Q ss_pred CC---CceeEEEeecCCCCCCCChhHHH-HHHHHHHHHHHhh-CCCeEEEEeCCCCC-CChhhhhccCCCCCcEEEEEee
Q 013777 261 NR---PSLAAIELINEPLAPGVALDTLK-SYYKAGYDAVRKY-TSTAYVIMSNRLGP-ADHKELLSFASGLSRVVIDVHY 334 (436)
Q Consensus 261 ~~---~~v~g~eL~NEP~~~~~~~~~~~-~~~~~~~~aIR~~-~p~~~Viv~~~~~~-~~~~~~~~~~~~~~nvv~~~H~ 334 (436)
++ |.|++|||+|||.....+.+.|+ +|+++++++||++ +++++||+++++.. ..+..++......+|+||++|+
T Consensus 177 ~~~y~~~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~~iii~dg~~~~~~w~~~l~~~~~~~nvv~s~H~ 256 (408)
T 1h4p_A 177 AEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHH 256 (408)
T ss_dssp SHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSEEEEEEE
T ss_pred ccCCCCeEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCceEeeecccCchhhhhhccccCCCCCEEEEeee
Confidence 98 99999999999996545778998 9999999999999 89888888876632 3345555443346799999999
Q ss_pred cCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC-----------------------------
Q 013777 335 YNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK----------------------------- 385 (436)
Q Consensus 335 Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~----------------------------- 385 (436)
|.+|+......+.+++++.+|.... . +. ..+.|+||||||+....+
T Consensus 257 Y~~~~~~~~~~~~~~~i~~~~~~~~-~---~~-~~~~pvivGE~g~~~~dc~~~lng~~~g~~~~g~~~~~~~~~~~~~~ 331 (408)
T 1h4p_A 257 YQVFASDQLERSIDEHIKVACEWGT-G---VL-NESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGS 331 (408)
T ss_dssp CSCSSHHHHTCCHHHHHHHHHHHHH-H---HT-TCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSC
T ss_pred ccCCCCccccCCHHHHHHHHHHHHH-H---Hh-hcCCCeEEEeccccccchHhhhcccccccccCCccccCccCCCccCc
Confidence 9987643334566777777764321 1 22 234569999999864311
Q ss_pred -----------CcCHHHHHHHHHHHHHHHccCCCcEEEEceecCC-CCCChHHHHhCCCccc
Q 013777 386 -----------DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 435 (436)
Q Consensus 386 -----------~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~-~~Ws~~~~~~~g~~~~ 435 (436)
...++.+++|+++|+++|++.. ||+||+||+++ +.|||+.++++|+||.
T Consensus 332 c~~~~~~~~~~~~~k~~~~~~~~aq~~~~~~~~-Gw~fWt~K~e~~~~W~~~~~~~~g~~p~ 392 (408)
T 1h4p_A 332 CANNDDIAYWSDERKENTRRYVEAQLDAFEMRG-GWIIWCYKTESSLEWDAQRLMFNGLFPQ 392 (408)
T ss_dssp CTTTTCGGGCCHHHHHHHHHHHHHHHHHHTTTT-EEEESCSCCSSCSTTCHHHHHHTTSSCS
T ss_pred ccCCCChhhccHHHHHHHHHHHHHHHHHHhhcC-CeEEEeEecCCCCCCCHHHHHHCCCCCC
Confidence 0124578999999999998655 99999999997 8999999999999985
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=313.26 Aligned_cols=254 Identities=20% Similarity=0.359 Sum_probs=187.7
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+++++++||+.|+++|||+||||+.|+.+.+...+..++++.++.||++|++|.++||+||||+|..||++... +
T Consensus 23 ~~~~~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~~~g~~~~~--~ 100 (343)
T 1ceo_A 23 EHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQD--F 100 (343)
T ss_dssp HHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC--------
T ss_pred hhhhcccCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecCCCccccCC--C
Confidence 59999999999999999999999999999876544333567778999999999999999999999999999876321 1
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCC-
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR- 309 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~- 309 (436)
+ ....|. +...++++++|+.||+||+++|.+++|||+|||... ..+.|.+++++++++||+++|+++|++++.
T Consensus 101 ~---~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~--~~~~~~~~~~~~~~~IR~~~p~~~i~v~~~~ 175 (343)
T 1ceo_A 101 K---TSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIGGNN 175 (343)
T ss_dssp -----CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEECHH
T ss_pred C---cccCcCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCc--chHHHHHHHHHHHHHHHhhCCCCEEEEeCCC
Confidence 1 123455 678899999999999999999999999999999853 468899999999999999999999999853
Q ss_pred CCCCChhhhhcc-CCCCCcEEEEEeecCcCC--CC----CC------------CC---------------------Chhh
Q 013777 310 LGPADHKELLSF-ASGLSRVVIDVHYYNLFS--NN----FN------------GL---------------------NVQQ 349 (436)
Q Consensus 310 ~~~~~~~~~~~~-~~~~~nvv~~~H~Y~~~~--~~----~~------------~~---------------------~~~~ 349 (436)
|++ ...+..+ +..++|+||++|+|.|+. .. .. .. ...+
T Consensus 176 ~~~--~~~~~~~~~~~~~~~v~~~H~Y~~~~ft~~~~~w~~~~~~~~~~~~yp~~~~~~~~~~~~~~c~~~~~~~~~~~~ 253 (343)
T 1ceo_A 176 YNS--PDELKNLADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLKL 253 (343)
T ss_dssp HHC--GGGGGGSCCCCCSSEEEEEEECCSHHHHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTCEE
T ss_pred cCC--HHHHhhcCcCCCCCEEEEeeccCccccCcCCCCCCcccccccCCCCCCCcccchhhhhccchhhhhhhhcccccc
Confidence 321 1122222 234679999999998741 10 00 00 0001
Q ss_pred hHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 350 NIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 350 ~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
..+.+...+. .+..+.+..+.|++|||||+... .+.+...+|++++++++++.++||+||+|+.+
T Consensus 254 ~~~~~~~~~~-~~~~~~~~~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 318 (343)
T 1ceo_A 254 NKELLRKDLK-PAIEFREKKKCKLYCGEFGVIAI---ADLESRIKWHEDYISLLEEYDIGGAVWNYKKM 318 (343)
T ss_dssp SHHHHHHHHH-HHHHHHHHHCCEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred CHHHHHHHHH-HHHHHHHHhCCCEEecccccccC---CChHHHHHHHHHHHHHHHHcCCCeEEeecCCC
Confidence 1122222222 22223334466699999998653 34567789999999999999999999999984
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=307.28 Aligned_cols=251 Identities=16% Similarity=0.213 Sum_probs=186.0
Q ss_pred hh-hhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 153 HW-DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 153 h~-~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
.| +.++|++||+.|+++|||+|||||+|+.+.++.++.+++++.+++||++|++|.++||+||||+|+.++..+
T Consensus 37 ~W~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~~~w~~----- 111 (345)
T 3ndz_A 37 NWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHENEWLK----- 111 (345)
T ss_dssp TTSCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSCTTTCC-----
T ss_pred CCCCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCcccccc-----
Confidence 35 457899999999999999999999998776655556777889999999999999999999999999975321
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----------ChhHHHHHHHHHHHHHHhh--
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLKSYYKAGYDAVRKY-- 298 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~----------~~~~~~~~~~~~~~aIR~~-- 298 (436)
...|. +...++++++|++||+||++++.+++|||+|||+.... ..+.+++|+++++++||++
T Consensus 112 -----~~~~~~~~~~~~~~~~w~~iA~~y~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~i~aIR~~g~ 186 (345)
T 3ndz_A 112 -----PFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGG 186 (345)
T ss_dssp -----CSTTTHHHHHHHHHHHHHHHHHHTTTCCTTEEEESCSCCCCCSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHTCG
T ss_pred -----ccccchHHHHHHHHHHHHHHHHHHcCCCCceEEEeccCCCCCCcccccCCCCchhHHHHHHHHHHHHHHHHhcCC
Confidence 11233 57889999999999999999988889999999996421 1356889999999999999
Q ss_pred -CCCeEEEEeCCCCCCChhhhhccCC--CCCcEEEEEeecCcCC--CCCC---CCChhhhHHHHHHhhhhhHHHhhhcCC
Q 013777 299 -TSTAYVIMSNRLGPADHKELLSFAS--GLSRVVIDVHYYNLFS--NNFN---GLNVQQNIDYVNNQRASDLGAVTTSNG 370 (436)
Q Consensus 299 -~p~~~Viv~~~~~~~~~~~~~~~~~--~~~nvv~~~H~Y~~~~--~~~~---~~~~~~~i~~i~~~~~~~~~~~~~~~~ 370 (436)
+|+++|++++...+.+...+..+.. .++|+||++|+|.||. .... ....+...+.+...+. .+..+.+.++
T Consensus 187 ~np~~~Iiv~g~~~~~~~~~~~~~~~P~~~~n~v~s~H~Y~p~~f~~~~~g~~~w~~~~~~~~~~~~~~-~~~~~~~~~g 265 (345)
T 3ndz_A 187 NNATRYIMVPTLAASAMSTTINDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSLDSEFD-AVYNKFVKNG 265 (345)
T ss_dssp GGGTSCEEEECGGGCCSHHHHHHCCCGGGCTTEEEEEECCCSHHHHTCTTSCSCCCSHHHHHHHHHHHH-HHHHHTGGGT
T ss_pred CCCCcEEEECCCccCcccchhhcccCCCCCCcEEEEEEecCchhcccCCCCCcCCCCcccHHHHHHHHH-HHHHHHHHcC
Confidence 6778999986433334333333332 3789999999999853 1100 1111122233332222 2233334456
Q ss_pred CeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 371 PLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 371 p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
.|++|||||+... ...+...+|++.+++.+++.++||++|++..
T Consensus 266 ~pv~iGEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~g~ 309 (345)
T 3ndz_A 266 RAVVIGEMGSINK---NNTAARVTHAEYYAKSAKARGLTPIWWDNGY 309 (345)
T ss_dssp CCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHTTTCEEEEEECSC
T ss_pred CcEEEEeecCCCC---CCHHHHHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 6699999998653 2345567899999999999999999999964
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=310.47 Aligned_cols=250 Identities=20% Similarity=0.341 Sum_probs=188.4
Q ss_pred hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 235 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~ 235 (436)
++++++||+.|+++|||+||||++|+.+.++..+..+.++.++.||++|++|.++||+||||+|..||++. +++...
T Consensus 35 ~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~pg~~~---~~~~~~ 111 (341)
T 1vjz_A 35 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSV---NKEVEE 111 (341)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEES---CTTSCC
T ss_pred CCCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCccc---ccCCCc
Confidence 67899999999999999999999998765543344567789999999999999999999999999988631 222222
Q ss_pred CCCCCC-hhHHHHHHHHHHHHHHHhCCC-CceeEEEeecCCCCCCC---ChhHHHHHHHHHHHHHHhhCCCeEEEEeCC-
Q 013777 236 GFQEWG-DSNVADTVAVIDFLAARYANR-PSLAAIELINEPLAPGV---ALDTLKSYYKAGYDAVRKYTSTAYVIMSNR- 309 (436)
Q Consensus 236 ~~~~w~-~~~~~~~~~~~~~lA~ry~~~-~~v~g~eL~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~- 309 (436)
....|. +...++++++|+.||+||+++ |.|++|||+|||..... +.+.|.+++++++++||+++|+++|++++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~ia~ry~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~v~g~~ 191 (341)
T 1vjz_A 112 KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLG 191 (341)
T ss_dssp SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHH
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCCCcccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCCc
Confidence 234566 678899999999999999999 99999999999996432 348899999999999999999999999852
Q ss_pred CCCCChhhhhccCCCCCcEEEEEeecCcCCCC------CCC-----C--------ChhhhHHHHHHhhhhhHHHhhhcCC
Q 013777 310 LGPADHKELLSFASGLSRVVIDVHYYNLFSNN------FNG-----L--------NVQQNIDYVNNQRASDLGAVTTSNG 370 (436)
Q Consensus 310 ~~~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~------~~~-----~--------~~~~~i~~i~~~~~~~~~~~~~~~~ 370 (436)
|+. ..+..+ .++|+||++|+|.|+... ... . ...+..+.+...+.... .+.+ ++
T Consensus 192 ~~~---~~~~~l--~~~n~v~s~H~Y~~~~~~~~~~~w~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~-~~~~-~g 264 (341)
T 1vjz_A 192 YGN---IPVDDL--TIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWI-KLRQ-KG 264 (341)
T ss_dssp HHT---BCCTTC--CCSSEEEEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHH-GGGG-GT
T ss_pred CCc---cccccc--CCCCeEEEEeeccCccccccCcccccccccCCCCCCCcccccchhhHHHHHHHHHHHH-HHHH-hC
Confidence 221 111112 368999999999875311 000 0 01112233433332222 2334 46
Q ss_pred CeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 371 PLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 371 p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
.|++|||||+... ...+...+|++++++++++.++||+||+||.+
T Consensus 265 ~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~W~~~~~ 309 (341)
T 1vjz_A 265 IEVFCGEMGAYNK---TPHDVVLKWLEDLLEIFKTLNIGFALWNFRGP 309 (341)
T ss_dssp CEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred CCeEEeccccccC---CChHHHHHHHHHHHHHHHHcCCceEEEecCCC
Confidence 6799999998653 34567789999999999989999999999985
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=312.46 Aligned_cols=295 Identities=16% Similarity=0.181 Sum_probs=204.7
Q ss_pred eccCCceEEEeeCeEEE---cCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHH
Q 013777 91 SASNGMFIQAISETRLT---ADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS 167 (436)
Q Consensus 91 ~~~nG~~lq~~~~~~v~---a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia 167 (436)
..+...||+++|..+|+ ++|.+ ..|.+.|+|....|+.....-| .|...+ +++|+.|+
T Consensus 34 ~~~~~~~l~v~G~~iv~~~~~~G~~--------~~v~l~GVN~~G~e~~~~~~~G----------l~~~~~-~~~i~~ik 94 (458)
T 3qho_A 34 QTPTGIYYEVRGDTIYMINVTSGEE--------TPIHLFGVNWFGFETPNHVVHG----------LWKRNW-EDMLLQIK 94 (458)
T ss_dssp CCSSSEEEEEETTEEEEEETTTCCE--------EECCCEEEECCCTTSTTCSCTT----------TTTSCH-HHHHHHHH
T ss_pred CCCCCCeEEEECCEEEEecCCCCCc--------ceEEEEEEecCcccccccccCC----------CCCCCH-HHHHHHHH
Confidence 34567899999999998 46621 1244567776566653221112 122221 78999999
Q ss_pred hCCCCEEEecCccccccCCCCC-------CC--CccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013777 168 SNGINAVRIPVGWWIANDPTPP-------KP--FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238 (436)
Q Consensus 168 ~~G~N~VRipv~~~~~~~~~~~-------~~--~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~ 238 (436)
++|||+|||||+|+.+.+...+ .| +....++.||++|++|.++||+||||+|..+++++ ..
T Consensus 95 ~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~~~~~----------~~ 164 (458)
T 3qho_A 95 SLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGCTHI----------EP 164 (458)
T ss_dssp HTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESSSSSC----------CS
T ss_pred HcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccCCCccC----------CC
Confidence 9999999999999876432111 12 13468999999999999999999999999876421 13
Q ss_pred CCC--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----------------CChhHHHHHHHHHHHHHHhhC
Q 013777 239 EWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----------------VALDTLKSYYKAGYDAVRKYT 299 (436)
Q Consensus 239 ~w~--~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~-----------------~~~~~~~~~~~~~~~aIR~~~ 299 (436)
.|. ....++++++|+.||+||+++|.|++|||+|||+... .+...|+.++++++++||+++
T Consensus 165 ~W~~~~~~~~~~~~~w~~lA~ryk~~p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~ai~aIRa~d 244 (458)
T 3qho_A 165 LWYTEDFSEEDFINTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVA 244 (458)
T ss_dssp SSCBTTBCHHHHHHHHHHHHHHHTTSTTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHHHHHHHHHC
T ss_pred ccCCchhhHHHHHHHHHHHHHHhCCCCCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhC
Confidence 454 2468999999999999999999999999999999521 234689999999999999999
Q ss_pred CCeEEEEeC-CCCC----------------CChhhhhccCC--CCCcEEEEEeecCcCCC---CCCCC-ChhhhHHHHHH
Q 013777 300 STAYVIMSN-RLGP----------------ADHKELLSFAS--GLSRVVIDVHYYNLFSN---NFNGL-NVQQNIDYVNN 356 (436)
Q Consensus 300 p~~~Viv~~-~~~~----------------~~~~~~~~~~~--~~~nvv~~~H~Y~~~~~---~~~~~-~~~~~i~~i~~ 356 (436)
|+++|++++ .|.+ .+.....+.+. +.+|+||++|.|.+... .|.+. +...++..
T Consensus 245 p~~lIiv~G~~w~~~~~~~~~~~~~~~wwg~~l~~v~~~Pi~l~~~nlvYs~H~Y~~~~~~~~~~~~~~~~~~~~~~--- 321 (458)
T 3qho_A 245 PHWLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVYSPHVFGPDVYNQPYFGPAKGFPDNLPD--- 321 (458)
T ss_dssp TTCEEEECCBSCCCHHHHHTSTTTTCCCTTCBCGGGTTSCCCSCTTTEEECCBCCCTTTCCCGGGSGGGTTTTTHHH---
T ss_pred CCCEEEEcCCcccCccccccccccccCcCCCCchhhhcCCCcCCCCCEEEEEEECCCCCCCCccccCccchHHHHHH---
Confidence 999999985 3332 12333333321 35899999999987421 11111 11222322
Q ss_pred hhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCC-cEEEEceecCC
Q 013777 357 QRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATF-GWAYWAHKCEA 419 (436)
Q Consensus 357 ~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~-Gw~~W~~k~~~ 419 (436)
.+.+.+..+.+.++.|+||||||......+.. ...+|++..++.++++++ +|+||++++++
T Consensus 322 ~w~~~~g~l~~~~~~Pl~igEfG~~~~~g~~~--~~~~w~~~~~~yl~~~~i~~w~~W~~np~s 383 (458)
T 3qho_A 322 IWYHHFGYVKLELGYSVVIGEFGGKYGHGGDP--RDVIWQNKLVDWMIENKFCDFFYWSWNPDS 383 (458)
T ss_dssp HHHHHTTHHHHTTCCCBCBCBCCCCTTSSSCT--HHHHHHHHHHHHHHHTTCCCEEESCSSSCC
T ss_pred HHHhhhhhHhhcCCCcEEEEecCCCcCCCCCc--chHHHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 23334445544556669999999865321112 235788888888888886 89999999863
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=303.29 Aligned_cols=284 Identities=18% Similarity=0.269 Sum_probs=193.0
Q ss_pred ceEEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEE
Q 013777 96 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 175 (436)
Q Consensus 96 ~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VR 175 (436)
.+|+++|+.+|+.+|.. |.+.|+|....|+.- ...+..|... .++||+.|+++|||+||
T Consensus 4 ~~l~v~G~~~~d~~G~~----------~~l~GvN~~g~~~~~----------~~~~g~~~~~-~~~~~~~~~~~G~n~vR 62 (358)
T 1ece_A 4 GYWHTSGREILDANNVP----------VRIAGINWFGFETCN----------YVVHGLWSRD-YRSMLDQIKSLGYNTIR 62 (358)
T ss_dssp SCCEEETTEEECTTSCE----------ECCEEEECCCBTTTT----------CSCTTTTTSC-HHHHHHHHHHTTCCEEE
T ss_pred CCEEEcCCEEEcCCCCE----------EEEEEEecCCcCccc----------cCccchhhch-HHHHHHHHHHcCCCEEE
Confidence 57889999999877763 334455533223210 0111223222 28999999999999999
Q ss_pred ecCccccccCCCCCCCCcc----------chHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC--hh
Q 013777 176 IPVGWWIANDPTPPKPFVG----------GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG--DS 243 (436)
Q Consensus 176 ipv~~~~~~~~~~~~~~~~----------~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~--~~ 243 (436)
||+.|+.+.+...+..++. ..+++||++|++|.++||+||||+|. |+++++ ...|. +.
T Consensus 63 i~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~-~~~~~~---------~~~w~~~~~ 132 (358)
T 1ece_A 63 LPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR-PDCSGQ---------SALWYTSSV 132 (358)
T ss_dssp EEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE-SBTTBC---------CSSSCCSSS
T ss_pred eeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCC-CCCCCC---------CCCCcCCCc
Confidence 9999886643222222222 38999999999999999999999998 665432 12343 45
Q ss_pred HHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----CChhHHHHHHHHHHHHHHhhCCCeEEEEeCC---------
Q 013777 244 NVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----VALDTLKSYYKAGYDAVRKYTSTAYVIMSNR--------- 309 (436)
Q Consensus 244 ~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~--------- 309 (436)
..++++++|+.||+||+++|.|++|||+|||.... .....|..++++++++||+++|+++|++++.
T Consensus 133 ~~~~~~~~~~~ia~r~~~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~dp~~~v~v~g~~~~~~~~~~ 212 (358)
T 1ece_A 133 SEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYW 212 (358)
T ss_dssp CHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECS
T ss_pred cHHHHHHHHHHHHHHhcCCCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEECCCccCCCCCCc
Confidence 68899999999999999999999999999998642 2457899999999999999999999999742
Q ss_pred CCCCChhhhhccC---CCCCcEEEEEeecCcCCCC---CCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCC
Q 013777 310 LGPADHKELLSFA---SGLSRVVIDVHYYNLFSNN---FNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 383 (436)
Q Consensus 310 ~~~~~~~~~~~~~---~~~~nvv~~~H~Y~~~~~~---~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~ 383 (436)
|+ .+.......+ ...+|+||++|.|.++... +...+....+..+ +...+..+.+.++.|++|||||+...
T Consensus 213 w~-~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~~~~w~~~~~~~~~~~~~---~~~~~~~~~~~~g~Pv~igEfG~~~~ 288 (358)
T 1ece_A 213 WG-GNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGI---WNKNWGYLFNQNIAPVWLGEFGTTLQ 288 (358)
T ss_dssp TT-TBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHHH---HHHHTHHHHHTTSSCEEEEECCCCCC
T ss_pred cC-CcCCcCccCCCcCCCCCceEEeeeecCCCcCCcccccCcchhhHHHHH---HHHHHHHHHhcCCCCEEEeccCCCCC
Confidence 22 1222221111 1257899999999986421 1111222333322 11223333345566699999998653
Q ss_pred CCCcCHHHHHHHHHHHHHHHcc------CCCcEEEEceecCC
Q 013777 384 VKDASKQDYQRFANAQLDVYGR------ATFGWAYWAHKCEA 419 (436)
Q Consensus 384 ~~~~~~~~~~~~~~~q~~~~~~------~~~Gw~~W~~k~~~ 419 (436)
. ....+|+++.++.+++ .++||+||++++++
T Consensus 289 ~-----~~~~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~~ 325 (358)
T 1ece_A 289 S-----TTDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPDS 325 (358)
T ss_dssp S-----HHHHHHHHHHHHHTCCHHHHTTSSCEEEESCSCSCC
T ss_pred C-----CccHHHHHHHHHHHHHhhhcccCCceeeEEcccCCC
Confidence 1 1224566666666666 89999999999753
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=299.31 Aligned_cols=247 Identities=19% Similarity=0.297 Sum_probs=186.6
Q ss_pred HHhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 151 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 151 ~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
++||+++++++||+.|+++|+|+|||||.|+.+.++.++.++++..++.+|++|++|.++||+||||+|..++.
T Consensus 35 ~~~w~~~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~~~------ 108 (320)
T 3nco_A 35 EGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEEL------ 108 (320)
T ss_dssp TTTTSCCCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHH------
T ss_pred CCccCCcCCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCccc------
Confidence 46999999999999999999999999999987765544455667789999999999999999999999986431
Q ss_pred CCCCCCCCCCC--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 231 SATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 231 sg~~~~~~~w~--~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
|. +...++++++|+.||+||+++|.|++|+|+|||... .+.+.|..++++++++||+++|+++|++++
T Consensus 109 ---------~~~~~~~~~~~~~~~~~ia~~~~~~~~vv~~~l~NEP~~~-~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~ 178 (320)
T 3nco_A 109 ---------YQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQN-LTPTKWNELYPKVLGEIRKTNPSRIVIIDV 178 (320)
T ss_dssp ---------HHCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSCCCTT-SCHHHHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred ---------ccCcHHHHHHHHHHHHHHHHHHcCCCceEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCcEEEECC
Confidence 11 356889999999999999999999999999999863 457889999999999999999999999985
Q ss_pred CCCCCChhhhhccC-CCCCcEEEEEeecCcCCCCCC-----CC---------ChhhhHHHHHHhhhhhHHHhhhcCCCeE
Q 013777 309 RLGPADHKELLSFA-SGLSRVVIDVHYYNLFSNNFN-----GL---------NVQQNIDYVNNQRASDLGAVTTSNGPLT 373 (436)
Q Consensus 309 ~~~~~~~~~~~~~~-~~~~nvv~~~H~Y~~~~~~~~-----~~---------~~~~~i~~i~~~~~~~~~~~~~~~~p~v 373 (436)
...+ ....+..+. ..++|+++++|.|.++..... .. ...+..+.+...+. .+..+.+.++.|+
T Consensus 179 ~~~~-~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~w~~~~~~~~~~w~g~~~~~~~~~~~~~-~~~~~~~~~g~Pv 256 (320)
T 3nco_A 179 PNWS-NYSYVRELKLVDDKNIIVSFHYYEPFNFTHQGAEWVSPTLPIGVKWEGKDWEVEQIRNHFK-YVSEWAKKNNVPI 256 (320)
T ss_dssp SGGG-BGGGGGGCCCCSCTTEEEEEEECCSHHHHTTTCTTSSSCCCSCCCCCCCHHHHHHHHHHHH-HHHHHHHHHTCCE
T ss_pred CCcC-chhHHhcCCCCCCCCeEEEEEecCCeeeEeccccccCCCCCCCCCCCCchhhHHHHHHHHH-HHHHHHHHcCCCE
Confidence 4221 122222221 237899999999987531100 00 01122233333322 2333333445569
Q ss_pred EeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 374 FVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 374 ~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
||||||+... ...+...+|++.+++++++.++||++|+++..
T Consensus 257 ~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~~~~ 298 (320)
T 3nco_A 257 FLGEFGAYSK---ADMESRVKWTKTVRRIAEEFGFSLAYWEFCAG 298 (320)
T ss_dssp EEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSGG
T ss_pred EEeeeeeecC---CCHHHHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 9999998653 24556678999999999999999999999763
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=296.61 Aligned_cols=236 Identities=15% Similarity=0.137 Sum_probs=174.9
Q ss_pred hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 235 (436)
Q Consensus 156 ~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~ 235 (436)
+++|++||+.|+++|+|+|||||.|..+.++.++.++++..+++||++|++|.++||+||||+|+.++. + |...
T Consensus 30 ~~~~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~~~-~-----g~~~ 103 (305)
T 1h1n_A 30 IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRY-Y-----NSII 103 (305)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEE-T-----TEEC
T ss_pred CCCCHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEeccccccc-c-----CCcC
Confidence 788999999999999999999999765443244567778899999999999999999999999998631 1 1100
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCC-CeEEEEeC-CCCCC
Q 013777 236 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS-TAYVIMSN-RLGPA 313 (436)
Q Consensus 236 ~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p-~~~Viv~~-~~~~~ 313 (436)
...++++++|++||+||+++|.| +|||+|||... +.+.|.+++++++++||+.++ +++|++++ .|.+.
T Consensus 104 -------~~~~~~~~~~~~ia~~~~~~~~V-~~~l~NEP~~~--~~~~w~~~~~~~~~~IR~~~~~~~~I~v~g~~~~~~ 173 (305)
T 1h1n_A 104 -------SSPSDFETFWKTVASQFASNPLV-IFDTDNEYHDM--DQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGA 173 (305)
T ss_dssp -------CCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGBS
T ss_pred -------CcHHHHHHHHHHHHHHhCCCCeE-EEeccCCCCCC--CHHHHHHHHHHHHHHHHhcCCCccEEEEccccccCc
Confidence 23788999999999999999999 89999999853 678999999999999999998 99999874 34321
Q ss_pred -Ch----hhhhccCCCCCcEEEEEeecCcCCCCCCCC-C--hhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC
Q 013777 314 -DH----KELLSFASGLSRVVIDVHYYNLFSNNFNGL-N--VQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK 385 (436)
Q Consensus 314 -~~----~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~-~--~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~ 385 (436)
.+ ..+..+.++.+|+||++|+|.+++...... . .....+.+. ....+.+.++.|++|||||+..+
T Consensus 174 ~~~~~~~~~~~~~~~p~~~~v~s~H~Y~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~g~Pv~igEfG~~~~-- 246 (305)
T 1h1n_A 174 WTWTNVNDNMKSLTDPSDKIIYEMHQYLDSDGSGTSATCVSSTIGQERIT-----SATQWLRANGKKGIIGEFAGGAD-- 246 (305)
T ss_dssp TTHHHHSGGGGGCCCTTCCEEEEEEEECSTTSSSCCSCCSCTTHHHHHHH-----HHHHHHHHTTCCEEEEEEECCSS--
T ss_pred ccccccCcccccCcCCCCCEEEEEEEcCCCCCcCCCCCccCcchHHHHHH-----HHHHHHHHcCCcEEEEeccCCCC--
Confidence 11 112233334579999999999864211110 0 110011111 11222234465699999998641
Q ss_pred CcCHHHHHHHHHHHHHHHccCC---CcEEEEceecC
Q 013777 386 DASKQDYQRFANAQLDVYGRAT---FGWAYWAHKCE 418 (436)
Q Consensus 386 ~~~~~~~~~~~~~q~~~~~~~~---~Gw~~W~~k~~ 418 (436)
+...+|++.+++.+++.+ +||++|++++-
T Consensus 247 ----~~~~~~~~~~~~~~~~~~~~~ig~~~W~~g~~ 278 (305)
T 1h1n_A 247 ----NVCETAITGMLDYMAQNTDVWTGAIWWAAGPW 278 (305)
T ss_dssp ----HHHHHHHHHHHHHHHTCTTTEEEEEEEEECTT
T ss_pred ----hHHHHHHHHHHHHHHHcCCeeEEEEEECCCCC
Confidence 456788999999999999 99999998763
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=293.25 Aligned_cols=258 Identities=17% Similarity=0.249 Sum_probs=184.6
Q ss_pred CceEEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHH-hCCCCE
Q 013777 95 GMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINA 173 (436)
Q Consensus 95 G~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia-~~G~N~ 173 (436)
...|+++|..+++.+|.. |.+.|++.. + ..++.++++++||+.|+ ++|+|+
T Consensus 9 ~g~l~v~G~~l~d~nG~~----------v~lrGvn~~----------~--------~~~~~~~~~~~~~~~l~~~~G~N~ 60 (303)
T 7a3h_A 9 HGQLSISNGELVNERGEQ----------VQLKGMSSH----------G--------LQWYGQFVNYESMKWLRDDWGINV 60 (303)
T ss_dssp HCSCEEETTEEECTTSCB----------CCCEEEEES----------C--------HHHHGGGCSHHHHHHHHHHTCCCE
T ss_pred CCeEEEeCCEEECCCCCE----------EEEEEeccC----------c--------cccccccCCHHHHHHHHHhcCCCE
Confidence 356789999999877763 445555421 1 12456789999999998 799999
Q ss_pred EEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Q 013777 174 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253 (436)
Q Consensus 174 VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~ 253 (436)
||||+.+. . ++...++..+++||++|++|.++||+||||+|..++++. ....+++.++|+
T Consensus 61 VRip~~~~---~--~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~---------------~~~~~~~~~~w~ 120 (303)
T 7a3h_A 61 FRAAMYTS---S--GGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP---------------NIYKEEAKDFFD 120 (303)
T ss_dssp EEEEEESS---T--TSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHHH
T ss_pred EEEEEEeC---C--CCccCCHHHHHHHHHHHHHHHHCCCEEEEEecccCCCCc---------------hHHHHHHHHHHH
Confidence 99999762 1 111124458999999999999999999999999886421 134678899999
Q ss_pred HHHHHhCCCCceeEEEeecCCCCCCCCh-hHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhccCCCCCcEEEEE
Q 013777 254 FLAARYANRPSLAAIELINEPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDV 332 (436)
Q Consensus 254 ~lA~ry~~~~~v~g~eL~NEP~~~~~~~-~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~~~~~~~nvv~~~ 332 (436)
.||+||+++|.|+ |||+|||....... +.++.++++++++||+++|+++|++++...+.++..+...+..++|++|++
T Consensus 121 ~ia~r~~~~~~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w~~~~~~~~~~p~~~~n~v~s~ 199 (303)
T 7a3h_A 121 EMSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYAF 199 (303)
T ss_dssp HHHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBHHHHHTSCCSCTTEEEEE
T ss_pred HHHHHhCCCCeEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCcccchhhHhhCCCCCCCEEEEE
Confidence 9999999999999 99999999643333 378999999999999999999999985322233444433333468999999
Q ss_pred eecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEE
Q 013777 333 HYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAY 412 (436)
Q Consensus 333 H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~ 412 (436)
|.|.... .+.+ .. .+..+. .++.|+||||||......... ...++++..++.++++++||++
T Consensus 200 H~Y~~~~--------~~~~---~~----~~~~~~-~~g~P~~igEfG~~~~~~~g~--~~~~~~~~~l~~~~~~~i~w~~ 261 (303)
T 7a3h_A 200 HFYAGTH--------GQNL---RD----QVDYAL-DQGAAIFVSEWGTSAATGDGG--VFLDEAQVWIDFMDERNLSWAN 261 (303)
T ss_dssp EEETTSC--------CHHH---HH----HHHHHH-HTTCCEEEEEEESSCTTSCSC--CCHHHHHHHHHHHHHTTCCEEE
T ss_pred EecCCCc--------hHHH---HH----HHHHHH-HcCCCEEEECCCCCCCCCCCc--ccHHHHHHHHHHHHhcCCceEE
Confidence 9996421 1111 11 122222 335569999999865321111 1134455667777889999999
Q ss_pred EceecCC
Q 013777 413 WAHKCEA 419 (436)
Q Consensus 413 W~~k~~~ 419 (436)
|+|+..+
T Consensus 262 W~~~~~~ 268 (303)
T 7a3h_A 262 WSLTHKD 268 (303)
T ss_dssp EEESCCS
T ss_pred EEecCCC
Confidence 9999753
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=296.60 Aligned_cols=264 Identities=16% Similarity=0.190 Sum_probs=183.0
Q ss_pred ccCcChhhHHHHHhhh-hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 140 GFGPDKAPQVLQDHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 140 ~~G~~~a~~~~~~h~~-~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+|.++.....+.||. ++++++||+.|+++|||+|||||.|..+..+.++..+++..+++||++|++|.++||+||||+
T Consensus 44 w~~~~~~~~~~e~~W~~~~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildl 123 (376)
T 3ayr_A 44 YLNYEKDQTASETCWGNPKTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNL 123 (376)
T ss_dssp TSCGGGCTTGGGGTTSCCCCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred cccccCCCCCCCCccCCCcCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 3444444555678996 589999999999999999999999976554344445667789999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----------ChhHHHHHH
Q 013777 219 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLKSYY 288 (436)
Q Consensus 219 H~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~----------~~~~~~~~~ 288 (436)
|..+... . .+ +. .+...+.+.++|++||+||+++|.+++|||+|||..... +.+.+.+|+
T Consensus 124 H~~~~~~---~-~~---~~---~~~~~~~~~~~w~~ia~~~~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~ 193 (376)
T 3ayr_A 124 HHETWNH---A-FS---ET---LDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAMN 193 (376)
T ss_dssp CSCSSCC---S-CT---TT---HHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSCCCCTTSTTTTTTCCHHHHHHHHHHH
T ss_pred CCccccc---c-cc---cc---hHHHHHHHHHHHHHHHHHHcCCCceeeEEeecCCCcCCCccccCCccHHHHHHHHHHH
Confidence 9975211 0 00 00 145678899999999999999999899999999986421 123578899
Q ss_pred HHHHHHHHhhCC---CeEEEEeCCCCCCChhhhhcc--CCCCCcEEEEEeecCcCCCCCC------CCChhhhHHHHHHh
Q 013777 289 KAGYDAVRKYTS---TAYVIMSNRLGPADHKELLSF--ASGLSRVVIDVHYYNLFSNNFN------GLNVQQNIDYVNNQ 357 (436)
Q Consensus 289 ~~~~~aIR~~~p---~~~Viv~~~~~~~~~~~~~~~--~~~~~nvv~~~H~Y~~~~~~~~------~~~~~~~i~~i~~~ 357 (436)
++++++||++++ +++|++++.....+...+..+ +..++|+||++|+|.++..... ....+.....+...
T Consensus 194 ~~~~~aIR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~~~~n~v~s~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (376)
T 3ayr_A 194 AVFLKTVRSAGGNNPKRHLMIPPYAAACNENSFNNFIFPEDDDKVIASVHAYAPYNFALNNGEGAVDKFDAAGKRDLEWN 273 (376)
T ss_dssp HHHHHHHHTSSTTGGGCCEEECCGGGBCSHHHHHTCCCCTTCTTEEEEEECCCSHHHHTCCSTTCCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCccCccccccccccCCCCCCCEEEEEeecCchhccccCCCCcccccChhhhhHHHHH
Confidence 999999999954 468888742221222223322 2235899999999998531100 01111112222221
Q ss_pred hhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 358 RASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 358 ~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
+. .+.......+.||||||||+.... +.+...+|++..++.+++.++||+||++..
T Consensus 274 ~~-~~~~~~~~~g~Pv~igEfG~~~~~---~~~~~~~w~~~~~~~~~~~~ig~~~W~~g~ 329 (376)
T 3ayr_A 274 IN-LMKKRFVDQGIPMILGEYGAMNRD---NEEDRATWAEFYMEKVTAMGVPQIWWDNGV 329 (376)
T ss_dssp HH-HHHHHTGGGTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHHHTTTCCEEEEECSC
T ss_pred HH-HHHHHHHHcCCcEEEEccccCCCC---CcHHHHHHHHHHHHHHHHCCCcEEEECCCC
Confidence 11 111111234556999999986542 345567788888888888999999999753
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=294.18 Aligned_cols=238 Identities=19% Similarity=0.261 Sum_probs=173.4
Q ss_pred CHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013777 159 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~ 238 (436)
|++.++.|+++|||+|||||.|+.+.+...+.++++..|++||++|++|.++||+||||+|..++. ++... + .
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~~-~g~~~-~----~- 117 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYARW-NGGII-G----Q- 117 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTEE-TTEET-T----T-
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCccc-CCccc-C----C-
Confidence 366778899999999999999986654334567778899999999999999999999999998852 22110 1 0
Q ss_pred CCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCC-eEEEEeCC-CCCC-Ch
Q 013777 239 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST-AYVIMSNR-LGPA-DH 315 (436)
Q Consensus 239 ~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~Viv~~~-~~~~-~~ 315 (436)
.+...++++++|++||+||+++|.|+ |||+|||+.. +.+.|++++++++++||+++|+ ++|++++. |.+. .+
T Consensus 118 --~~~~~~~~~~~w~~iA~ryk~~~~Vi-~el~NEP~~~--~~~~w~~~~~~~i~aIR~~~~~~~~Iiv~g~~w~~~~~w 192 (340)
T 3qr3_A 118 --GGPTNAQFTSLWSQLASKYASQSRVW-FGIMNEPHDV--NINTWAATVQEVVTAIRNAGATSQFISLPGNDWQSAGAF 192 (340)
T ss_dssp --TSSCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECSGGGBTTTT
T ss_pred --CHHHHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCCC--CHHHHHHHHHHHHHHHHhhCCCccEEEEeCCcccccccc
Confidence 12568899999999999999999997 9999999953 6789999999999999999999 79999853 4321 11
Q ss_pred ------hhhhccCCC---CCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCC
Q 013777 316 ------KELLSFASG---LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD 386 (436)
Q Consensus 316 ------~~~~~~~~~---~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~ 386 (436)
..+..+..+ ++|+||++|+|.+++. ++...++....+. .+...+..+.+.++.|+||||||+..
T Consensus 193 ~~~~~~~~l~~l~dP~~~~~nlvys~H~Y~~~~~--sgt~~~~~~~~i~-~~~~~~~~~~~~~g~pv~iGEfG~~~---- 265 (340)
T 3qr3_A 193 ISDGSAAALSQVTNPDGSTTNLIFDVHKYLDSDN--SGTHAECTTNNID-GAFSPLATWLRQNNRQAILTETGGGN---- 265 (340)
T ss_dssp TTTSHHHHHTTCCCTTSCCTTEEEEEECCCSTTS--SSCSSSCCCCSTT-TTHHHHHHHHHHTTCCEEEEEECCCS----
T ss_pred cccccchhhcccCCCCCCCCCEEEEEEeCCCCCC--CCCCcccchhhHH-HHHHHHHHHHHHcCCcEEEeCccCCC----
Confidence 112223233 4899999999998753 2222221111111 11122233344567679999999842
Q ss_pred cCHHHHHHHHHHHHHHHccCC---CcEEEEceec
Q 013777 387 ASKQDYQRFANAQLDVYGRAT---FGWAYWAHKC 417 (436)
Q Consensus 387 ~~~~~~~~~~~~q~~~~~~~~---~Gw~~W~~k~ 417 (436)
.+...++++.+++.++++. +||++|+..+
T Consensus 266 --~~~~~~~~~~~l~~~~~~~~~~~gw~~W~~G~ 297 (340)
T 3qr3_A 266 --VQSCIQDMCQQIQYLNQNSDVYLGYVGWGAGS 297 (340)
T ss_dssp --SHHHHHHHHHHHHHHHTTTTTEEEEEEEEEET
T ss_pred --ChHHHHHHHHHHHHHHHcCCcceEEEEecCCC
Confidence 1456788999999999888 7788887654
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-35 Score=288.24 Aligned_cols=247 Identities=19% Similarity=0.334 Sum_probs=181.8
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||.++++++||+.|+++|+|+||||+.|+.+.+...+..+++..++.||++|++|+++||+||||+|..++.++
T Consensus 28 ~~w~~~~~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~~~~~~----- 102 (317)
T 3aof_A 28 GDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMN----- 102 (317)
T ss_dssp TTTSCCCCTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHH-----
T ss_pred CcCCCCCCHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCCccccC-----
Confidence 578889999999999999999999999988665433223344668999999999999999999999998764321
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCC-C
Q 013777 232 ATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-L 310 (436)
Q Consensus 232 g~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~-~ 310 (436)
. .+...+++.++|+.||+||+++|.|++|||+|||.. ..+.+.|.+++++++++||+++|+++|++++. |
T Consensus 103 ----~----~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~-~~~~~~~~~~~~~~~~~iR~~~p~~~i~v~~~~~ 173 (317)
T 3aof_A 103 ----D----PEEHKERFLALWKQIADRYKDYPETLFFEILNAPHG-NLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEW 173 (317)
T ss_dssp ----C----HHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSSCCT-TSCHHHHHHHHHHHHHHHHHHCSSSCEEECCSGG
T ss_pred ----C----cHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCEEEECCCCc
Confidence 0 136788999999999999999999999999999986 34678999999999999999999999999853 3
Q ss_pred CCCChhhhhcc--CCCCCcEEEEEeecCcCCC------CCCCC--------ChhhhHHHHHHhhhhhHHHhhhcCCCeEE
Q 013777 311 GPADHKELLSF--ASGLSRVVIDVHYYNLFSN------NFNGL--------NVQQNIDYVNNQRASDLGAVTTSNGPLTF 374 (436)
Q Consensus 311 ~~~~~~~~~~~--~~~~~nvv~~~H~Y~~~~~------~~~~~--------~~~~~i~~i~~~~~~~~~~~~~~~~p~v~ 374 (436)
... ..+..+ +....|+|+++|+|.++.. +.... ......+.+..... .+..+.+..+.|++
T Consensus 174 ~~~--~~~~~~~~p~~~~~~v~~~H~Y~~~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~g~Pv~ 250 (317)
T 3aof_A 174 GGI--SALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFN-FIEEWSKKNKRPIY 250 (317)
T ss_dssp GSS--TTGGGCCCCTTCCSEEEEEECCCSHHHHTTTCTTSTTGGGGTTCCCCCHHHHHHHHHHHH-HHHHHHHHHTCCEE
T ss_pred CcH--hHHhhCcCCCCCCCEEEEEeccCCcccccCCCCCcCcccccCCcCcCcHHHHHHHHHHHH-HHHHHHHHcCCCEE
Confidence 321 122222 2235799999999987521 11000 00111122222222 22222233355699
Q ss_pred eecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 375 VGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 375 vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
|||||+... .+.+...+|++.+++++++.++||+||+++..
T Consensus 251 igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 291 (317)
T 3aof_A 251 IGEFGAYRK---ADLESRIKWTSFVVREMEKRRWSLAYWEFCSG 291 (317)
T ss_dssp EEECCCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSST
T ss_pred EeeccccCC---CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 999998553 24456678899999999889999999999864
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=286.74 Aligned_cols=258 Identities=17% Similarity=0.217 Sum_probs=183.9
Q ss_pred CceEEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHH-HhCCCCE
Q 013777 95 GMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFL-SSNGINA 173 (436)
Q Consensus 95 G~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~i-a~~G~N~ 173 (436)
..+|+++|..+++.+|.. |.+.|++.. +. .++..+++++||+.| +++|+|+
T Consensus 34 ~g~l~v~G~~l~d~nG~~----------v~l~Gvn~h--~~----------------~~~~~~~~~~~~~~l~~~~G~N~ 85 (327)
T 3pzt_A 34 NGQLSIKGTQLVNRDGKA----------VQLKGISSH--GL----------------QWYGEYVNKDSLKWLRDDWGITV 85 (327)
T ss_dssp CCSCEEETTEEECTTSCB----------CCCEEEEES--CH----------------HHHGGGCSHHHHHHHHHHTCCSE
T ss_pred CCcEEEeCCEEECCCCCE----------EEEEEEcCC--ch----------------hhcCCCCCHHHHHHHHHhcCCCE
Confidence 456788899998877763 445555422 11 245668999999999 6899999
Q ss_pred EEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Q 013777 174 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253 (436)
Q Consensus 174 VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~ 253 (436)
||||+.+. .++...++..++.||++|++|.++||+||||+|..++++. ....++++++|+
T Consensus 86 VRi~~~~~-----~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~~~~~---------------~~~~~~~~~~w~ 145 (327)
T 3pzt_A 86 FRAAMYTA-----DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWHILNDGNP---------------NQNKEKAKEFFK 145 (327)
T ss_dssp EEEEEESS-----TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHHH
T ss_pred EEEEeEEC-----CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc---------------hHHHHHHHHHHH
Confidence 99999531 1111224568999999999999999999999999876421 134678899999
Q ss_pred HHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhccCCCCCcEEEEEe
Q 013777 254 FLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 333 (436)
Q Consensus 254 ~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~~~~~~~nvv~~~H 333 (436)
.||+|||++|.|+ |||+|||.....-...++.|+++++++||+++|+++|++++...+.++..+...+..++|+||++|
T Consensus 146 ~~a~r~k~~p~Vi-~el~NEp~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w~~~~~~~~~~~~~~~n~v~s~H 224 (327)
T 3pzt_A 146 EMSSLYGNTPNVI-YEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVNDAADDQLKDANVMYALH 224 (327)
T ss_dssp HHHHHHTTCTTEE-EECCSCCCSSCCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHHHHHTSCCCCTTEEEEEE
T ss_pred HHHHHhCCCCcEE-EEeccCCCCCcccHHHHHHHHHHHHHHHHhhCCCCEEEEeCCcccccchhhhhCCCCCCCeEEEEE
Confidence 9999999999999 999999985322235899999999999999999999999854222344444333345689999999
Q ss_pred ecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEE
Q 013777 334 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYW 413 (436)
Q Consensus 334 ~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W 413 (436)
.|.... .+.+.. .+..+ +.++.|+||||||........ .....+++..++.++++++||++|
T Consensus 225 ~Y~~~~--------~~~~~~-------~~~~~-~~~g~Pv~igEfG~~~~~g~g--~~~~~~~~~~l~~~~~~~i~w~~W 286 (327)
T 3pzt_A 225 FYAGTH--------GQFLRD-------KANYA-LSKGAPIFVTEWGTSDASGNG--GVFLDQSREWLKYLDSKTISWVNW 286 (327)
T ss_dssp EETTTC--------CHHHHH-------HHHHH-HHTTCCEEEEEEESSCTTSCS--CCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred ecCCCc--------hHHHHH-------HHHHH-HHcCCcEEEEccCCCCCCCCC--cccHHHHHHHHHHHHHcCCeeEEE
Confidence 996521 111111 11122 234556999999976532111 112335566677778889999999
Q ss_pred ceecCC
Q 013777 414 AHKCEA 419 (436)
Q Consensus 414 ~~k~~~ 419 (436)
+|++..
T Consensus 287 ~~~d~~ 292 (327)
T 3pzt_A 287 NLSDKQ 292 (327)
T ss_dssp EESCCS
T ss_pred EecCCC
Confidence 999753
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-35 Score=293.33 Aligned_cols=269 Identities=17% Similarity=0.231 Sum_probs=179.0
Q ss_pred ceEEEeeC-eEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHH-hCCCCE
Q 013777 96 MFIQAISE-TRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINA 173 (436)
Q Consensus 96 ~~lq~~~~-~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia-~~G~N~ 173 (436)
.+|+++|+ .+|+++|.. |.+.|++....+ ....+++++||+.|+ ++|+|+
T Consensus 19 ~~~~v~G~~~lvd~~G~~----------~~lrGvn~~~~~------------------~~~~~~~~~d~~~l~~~~G~N~ 70 (364)
T 1g01_A 19 QLVELNGQLTLAGEDGTP----------VQLRGMSTHGLQ------------------WFGEIVNENAFVALSNDWGSNM 70 (364)
T ss_dssp EEEEETTEEEEECTTSCB----------CCCEEEEESCHH------------------HHGGGCSHHHHHHHHTTSCCSE
T ss_pred CcEEecCCeeEECCCCCE----------EEEEEEecCccc------------------ccCCccCHHHHHHHHHHCCCCE
Confidence 57888887 788777753 334454422111 123468899999996 999999
Q ss_pred EEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 013777 174 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQEWGDSNVADTVAVI 252 (436)
Q Consensus 174 VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~-pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~ 252 (436)
||||+.|. .++.++++..+++||++|++|.++||+||||+|.. ||.+++ ...+++.++|
T Consensus 71 VRip~~~~-----~~~~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~~~~g~~~~---------------~~~~~~~~~w 130 (364)
T 1g01_A 71 IRLAMYIG-----ENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRA---------------DVYSGAYDFF 130 (364)
T ss_dssp EEEEEESS-----SSSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTS---------------GGGTTHHHHH
T ss_pred EEEEeeeC-----CCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCCCh---------------HHHHHHHHHH
Confidence 99999862 12234566789999999999999999999999984 554431 1124578999
Q ss_pred HHHHHHhC---CCCceeEEEeecCCCCCC-----C-----ChhHHHHHHHHHHHHHHhhCCCeEEEEeCC-CCCCChhhh
Q 013777 253 DFLAARYA---NRPSLAAIELINEPLAPG-----V-----ALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGPADHKEL 318 (436)
Q Consensus 253 ~~lA~ry~---~~~~v~g~eL~NEP~~~~-----~-----~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~-~~~~~~~~~ 318 (436)
++||+||+ ++|.|+ |||+|||.... . ....|+.|+++++++||+++ +++|++++. |+ .+....
T Consensus 131 ~~ia~~y~~~~~~~~Vi-~el~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~~-~~~I~v~~~~w~-~~~~~~ 207 (364)
T 1g01_A 131 EEIADHYKDHPKNHYII-WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG-DNMILVGNPNWS-QRPDLS 207 (364)
T ss_dssp HHHHHHHTTCTTGGGEE-EECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCHHHH-TCHHHH
T ss_pred HHHHHHhhccCCCCeEE-EEcCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC-CcEEEECCCCcc-cccchh
Confidence 99999999 778998 99999998531 1 12467889999999999999 999999742 32 222222
Q ss_pred hccCCCCCcEEEEEeecCcCCCC----CCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHH
Q 013777 319 LSFASGLSRVVIDVHYYNLFSNN----FNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQR 394 (436)
Q Consensus 319 ~~~~~~~~nvv~~~H~Y~~~~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~ 394 (436)
...+..++|+||++|+|.++... +...+.++..+.+ ...+..+. ..+.|+||||||+........ ...+
T Consensus 208 ~~~p~~~~niv~s~H~Y~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~g~Pv~igEfG~~~~~~~~~--~~~~ 280 (364)
T 1g01_A 208 ADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNV----MANVRYAL-DNGVAVFATEWGTSQANGDGG--PYFD 280 (364)
T ss_dssp HHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGGGCCCH----HHHHHHHH-HTTCCEEEEEEESSBTTTBSC--CCHH
T ss_pred hcCCCCCCCEEEEEEecCCccCCCCCCCCCCchHHHHHHH----HHHHHHHH-HCCCeEEEEccccccCCCCCC--cCHH
Confidence 22223458999999999986421 1111111111111 11122222 345569999999864311111 1124
Q ss_pred HHHHHHHHHccCCCcEEEEceecCCCCC
Q 013777 395 FANAQLDVYGRATFGWAYWAHKCEANHW 422 (436)
Q Consensus 395 ~~~~q~~~~~~~~~Gw~~W~~k~~~~~W 422 (436)
+++++++.+++.++||++|+|+..+..+
T Consensus 281 ~~~~~~~~~~~~~ig~~~W~~~~~~~~~ 308 (364)
T 1g01_A 281 EADVWLNFLNKHNISWANWSLTNKNEIS 308 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSSTT
T ss_pred HHHHHHHHHHHCCCceEEEeCCCCCCce
Confidence 4556667788899999999999864333
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=290.00 Aligned_cols=252 Identities=17% Similarity=0.211 Sum_probs=176.0
Q ss_pred HHhhh-hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 151 QDHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 151 ~~h~~-~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+.+|. .+++++||+.|+++|||+|||||.|+.+.+ .++..++++.+++||++|++|.++||+||||+|..++..++.
T Consensus 54 e~~W~~~~~~~~di~~i~~~G~n~vRipv~w~~~~~-~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~~~w~~~~- 131 (380)
T 1edg_A 54 ETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVS-GSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGY- 131 (380)
T ss_dssp HHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEE-TTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSB-
T ss_pred cCcCCCCcccHHHHHHHHHcCCCEEEecccHHhhcC-CCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchhhhcCC-
Confidence 45674 468999999999999999999999876643 333456677899999999999999999999999988643321
Q ss_pred CCCCCCCCCCCC-hhHHHHH-HHHHHHHHHHhCCCCceeEEEeecCCCCCC--CCh-------------hHHHHHHHHHH
Q 013777 230 HSATRDGFQEWG-DSNVADT-VAVIDFLAARYANRPSLAAIELINEPLAPG--VAL-------------DTLKSYYKAGY 292 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~-~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~--~~~-------------~~~~~~~~~~~ 292 (436)
.+.+. +...+++ +++|++||+||+++|.+++|||+|||.... ... +.+.+|+++++
T Consensus 132 -------~~~~~~~~~~~~~~~~~w~~ia~~~~~~~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~~~~~l~~~~~~~~ 204 (380)
T 1edg_A 132 -------FPSSQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFV 204 (380)
T ss_dssp -------CSSGGGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred -------CCccccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEecCCCCcCCCCcccccccCCCchHHHHHHHHHHHHHHH
Confidence 11222 4678899 999999999999999999999999998632 111 55789999999
Q ss_pred HHHHhhC---CCeEEEEeCCCCCCChhhhhcc--CCC----CCcEEEEEeecCcCCCC-----------CCCCChhhhHH
Q 013777 293 DAVRKYT---STAYVIMSNRLGPADHKELLSF--ASG----LSRVVIDVHYYNLFSNN-----------FNGLNVQQNID 352 (436)
Q Consensus 293 ~aIR~~~---p~~~Viv~~~~~~~~~~~~~~~--~~~----~~nvv~~~H~Y~~~~~~-----------~~~~~~~~~i~ 352 (436)
++||+++ |+++|++++...+.+...+..+ +.. .+|+||++|+|.++... +...+ ....+
T Consensus 205 ~~IR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~d~~~~~~n~v~s~H~Y~~~~f~~~~~~~~g~~~w~~~~-~~~~~ 283 (380)
T 1edg_A 205 NTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNIND-SKDQS 283 (380)
T ss_dssp HHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTC-HHHHH
T ss_pred HHHHhcCCCCCCceEEECCCcCCccccccccccCCCCCccccCcEEEEEeecCCcccccccccCCCCCccCCCc-hhhHH
Confidence 9999995 8888988742211111122222 222 23999999999885210 11000 11112
Q ss_pred HHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEcee
Q 013777 353 YVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 416 (436)
Q Consensus 353 ~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k 416 (436)
.+...+. .+.......+.||+|||||+.... ..+...+|++..++.+++.++||++|++.
T Consensus 284 ~i~~~~~-~~~~~~~~~g~Pv~igEfG~~~~~---~~~~~~~~~~~~~~~~~~~gig~~~W~~g 343 (380)
T 1edg_A 284 EVTWFMD-NIYNKYTSRGIPVIIGECGAVDKN---NLKTRVEYMSYYVAQAKARGILCILWDNN 343 (380)
T ss_dssp HHHHHHH-HHHHHTGGGTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHH-HHHHHHHHcCCCEEEEeccCCCCC---ChHHHHHHHHHHHHHHHHCCCceEEECCC
Confidence 2222221 122122233556999999986542 33456778899999998899999999964
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=275.57 Aligned_cols=218 Identities=17% Similarity=0.258 Sum_probs=157.8
Q ss_pred hcCCHHHHHHHH-hCCCCEEEecCccccccCCCCCCCCc----cchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 156 ~~ite~d~~~ia-~~G~N~VRipv~~~~~~~~~~~~~~~----~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
++++++||+.|+ ++|||+||||+.|. +.. ++|. ++.+++||++|++|.++||+||||+|..++.
T Consensus 37 ~~~~~~di~~~~~~~G~N~vRi~~~~~----~~~-~~~~~~~p~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~------ 105 (293)
T 1tvn_A 37 KFYTAETVAKAKTEFNATLIRAAIGHG----TST-GGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEAH------ 105 (293)
T ss_dssp GGCSHHHHHHHHHHHCCSEEEEEEECC----TTS-TTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCGG------
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecccc----CCC-CCccccChHHHHHHHHHHHHHHHHCCCEEEEEcCCCCcc------
Confidence 468899999999 59999999999873 222 2333 4689999999999999999999999987641
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC-C
Q 013777 231 SATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN-R 309 (436)
Q Consensus 231 sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~-~ 309 (436)
...++++++|++||+||+++|+|+ |||+|||.... ..+.+++++++++++||+++|+++|++++ .
T Consensus 106 ------------~~~~~~~~~~~~~a~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~ 171 (293)
T 1tvn_A 106 ------------TDQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQIS-WVNDIKPYAETVIDKIRAIDPDNLIVVGTPT 171 (293)
T ss_dssp ------------GCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHTTCCSCEEEECCHH
T ss_pred ------------ccHHHHHHHHHHHHHHhCCCCeEE-EEccCCCCCCc-hHHHHHHHHHHHHHHHHhhCCCCEEEECCCC
Confidence 346889999999999999999998 99999998532 12679999999999999999999999974 2
Q ss_pred CCCCChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC--Cc
Q 013777 310 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK--DA 387 (436)
Q Consensus 310 ~~~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~--~~ 387 (436)
|. .+.......+..++|+||++|.|.+.. ++.+.. .+... ...+.|++|||||+..... +.
T Consensus 172 ~~-~~~~~~~~~p~~~~n~v~s~H~Y~~~~--------~~~~~~-------~~~~~-~~~~~Pv~igEfG~~~~~~~g~~ 234 (293)
T 1tvn_A 172 WS-QDVDVASQNPIDRANIAYTLHFYAGTH--------GQSYRN-------KAQTA-LDNGIALFATEWGTVNADGNGGV 234 (293)
T ss_dssp HH-TCHHHHHHSCCCSSSEEEEEEEETTTC--------CHHHHH-------HHHHH-HHTTCCEEEEEEESSCTTSCSCC
T ss_pred cc-cccchhccCCCCCCCEEEEEEeCCCCc--------hHHHHH-------HHHHH-HHCCCcEEEEcccCcCCCCCCCC
Confidence 32 222222111223579999999997621 122211 11112 2335569999999865321 12
Q ss_pred CHHHHHHHHHHHHHHHccCCCcEEEEceecCC
Q 013777 388 SKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 419 (436)
Q Consensus 388 ~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~ 419 (436)
..+...+| ++.+++.++||++|+|+..+
T Consensus 235 ~~~~~~~~----~~~~~~~~~g~~~W~~~~~~ 262 (293)
T 1tvn_A 235 NINETDAW----MAFFKTNNISHANWALNDKN 262 (293)
T ss_dssp CHHHHHHH----HHHHHHHTCCEEEEEESCSS
T ss_pred CHHHHHHH----HHHHHHCCCeeEEEecCCCC
Confidence 33333444 45566677999999999754
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=273.52 Aligned_cols=243 Identities=14% Similarity=0.213 Sum_probs=173.7
Q ss_pred EEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEec
Q 013777 98 IQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 177 (436)
Q Consensus 98 lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRip 177 (436)
|+++|+.+++++|.. |.+.|++. ...| ..-.+++||+.|+++|+|+||||
T Consensus 2 l~v~G~~i~d~~G~~----------~~lrGvn~-~~~w-------------------~~~~~~~~~~~i~~~G~N~VRi~ 51 (294)
T 2whl_A 2 FSVDGNTLYDANGQP----------FVMRGINH-GHAW-------------------YKDTASTAIPAIAEQGANTIRIV 51 (294)
T ss_dssp CEEETTEEECTTSCB----------CCCEEEEE-CGGG-------------------CGGGHHHHHHHHHHTTCSEEEEE
T ss_pred eEEECCEEECCCCCE----------EEEEEeec-cccc-------------------CCcchHHHHHHHHHcCCCEEEEE
Confidence 567888888777653 44555552 1111 11125789999999999999999
Q ss_pred CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHH
Q 013777 178 VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 257 (436)
Q Consensus 178 v~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ 257 (436)
++. +.+|.++.+++||++|++|.++||+||||+|..++.++ ....+++.++|++||+
T Consensus 52 ~~~--------~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~---------------~~~~~~~~~~w~~ia~ 108 (294)
T 2whl_A 52 LSD--------GGQWEKDDIDTIREVIELAEQNKMVAVVEVHDATGRDS---------------RSDLNRAVDYWIEMKD 108 (294)
T ss_dssp ECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCC---------------HHHHHHHHHHHHHTHH
T ss_pred ecC--------CCccCccHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc---------------chhHHHHHHHHHHHHH
Confidence 962 12455568999999999999999999999999876432 1567889999999999
Q ss_pred HhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC-CCCCCChh-------hhhccCCCCCcEE
Q 013777 258 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPADHK-------ELLSFASGLSRVV 329 (436)
Q Consensus 258 ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~-~~~~~~~~-------~~~~~~~~~~nvv 329 (436)
||+++|..++|||+|||... .+...|.++|++++++||+.+|+++|++++ .|.. ... .++ ..++.+|+|
T Consensus 109 ~y~~~~~~v~~el~NEP~~~-~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~-~~~~~~~~~~~~~-~~d~~~n~v 185 (294)
T 2whl_A 109 ALIGKEDTVIINIANEWYGS-WDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQ-YPQSIHDYGQDVF-NADPLKNTM 185 (294)
T ss_dssp HHTTCTTTEEEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTT-BTHHHHHHHHHHH-HTCTTCCEE
T ss_pred HHcCCCCeEEEEecCCCCCC-CChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCC-Cchhhhhhhhccc-cCCCcCCEE
Confidence 99999433369999999852 455679999999999999999999999985 3432 211 122 123457999
Q ss_pred EEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCc
Q 013777 330 IDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFG 409 (436)
Q Consensus 330 ~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~G 409 (436)
|++|.|.++.. . ++.+.. .+..+.+ .+.|++|||||+... .. +++.+++.++++++|
T Consensus 186 ~s~H~Y~~~~~-----~-~~~~~~-------~~~~~~~-~~~Pv~igEfG~~~~--~~-------~~~~~~~~~~~~~i~ 242 (294)
T 2whl_A 186 FSIHMYEYAGG-----D-ANTVRS-------NIDRVID-QDLALVIGEFGHRHT--DV-------DEDTILSYSEETGTG 242 (294)
T ss_dssp EEEEESTTTTS-----S-HHHHHH-------HHHHHHT-TTCCEEEEEECCCCC--CC-------CHHHHHHHHHHHTCE
T ss_pred EEEEeccCCCC-----c-HHHHHH-------HHHHHHH-CCCCEEEEccCCCCC--Cc-------cHHHHHHHHHHcCCe
Confidence 99999975421 1 122211 1222223 455699999998654 11 235566667778899
Q ss_pred EEEEceecCC
Q 013777 410 WAYWAHKCEA 419 (436)
Q Consensus 410 w~~W~~k~~~ 419 (436)
|++|+|+..+
T Consensus 243 w~~W~~~~~~ 252 (294)
T 2whl_A 243 WLAWSWKGNS 252 (294)
T ss_dssp EEESCSSCCC
T ss_pred EEEEEecCCC
Confidence 9999999865
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=296.76 Aligned_cols=251 Identities=19% Similarity=0.371 Sum_probs=179.0
Q ss_pred hcCCHHHH-HHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCC-------CCCCC--
Q 013777 156 SYITDEDF-KFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA-------APGSQ-- 225 (436)
Q Consensus 156 ~~ite~d~-~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~-------~pg~q-- 225 (436)
.+++++|| +.|+++|||+||||+.|+.+ +|. ++.|+...|+.|+++|++|+++||+||||+|. .|++|
T Consensus 64 ~~~~~~di~~~l~~~G~N~VRl~v~w~~~-~p~-~g~~~~~~l~~l~~~v~~a~~~Gi~vildlH~d~~~~~~~P~~~~~ 141 (481)
T 2osx_A 64 PQFTEADLAREYADMGTNFVRFLISWRSV-EPA-PGVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSG 141 (481)
T ss_dssp CSCCHHHHHHHHHHHCCCEEEEEECHHHH-CSB-TTBCCHHHHHHHHHHHHHHHHTTCEEEEEECCBSSCGGGSTTTCSB
T ss_pred ccccHHHHHHHHHHCCCCEEEEeCcHHHc-CCC-CCCcCHHHHHHHHHHHHHHHHCCCEEEEEccccccccccccccccc
Confidence 45789999 99999999999999997754 454 35788889999999999999999999999998 78877
Q ss_pred CCCCCCCCCCCCCCC------------------------------------C-hhHHHHHHHHHHHHHHHhCCCCceeEE
Q 013777 226 NGNEHSATRDGFQEW------------------------------------G-DSNVADTVAVIDFLAARYANRPSLAAI 268 (436)
Q Consensus 226 ng~~~sg~~~~~~~w------------------------------------~-~~~~~~~~~~~~~lA~ry~~~~~v~g~ 268 (436)
|+++..| ++.+.| . +..++++.++|+.||+||+++|.|++|
T Consensus 142 ng~~~gg--~g~P~W~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~la~ryk~~p~Vi~~ 219 (481)
T 2osx_A 142 NGAGAIG--NGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAY 219 (481)
T ss_dssp TTBCSSS--BSSCGGGCCCTTCCCCCCSSGGGGGGSHHHHHHHHHHTTTTSSCTHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred cccccCC--CCCccceeccCCCCccccccchhhccchhhHHHHHHHhccccCCHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3444222 122222 1 345788999999999999999999999
Q ss_pred EeecCCCCCCC-----ChhHHHHHHHHHHHHHHhhCCCeEEEEeCC-CCCCCh---hhhhccCC---CCCcEEEEEeecC
Q 013777 269 ELINEPLAPGV-----ALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGPADH---KELLSFAS---GLSRVVIDVHYYN 336 (436)
Q Consensus 269 eL~NEP~~~~~-----~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~-~~~~~~---~~~~~~~~---~~~nvv~~~H~Y~ 336 (436)
||+|||..... +.+.|..++++++++||+++|+++|++++. ++ .++ ..+..+.. ..+|+||++|+|.
T Consensus 220 el~NEP~~~~~~~~~~~~~~l~~~~~~~~~aIR~~dp~~~I~v~~~~~~-~~~~~~~~l~~~~~p~~~~~~~v~s~H~Y~ 298 (481)
T 2osx_A 220 DLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIG-VNQGLPSGLTKIDDPRAGQQRIAYCPHLYP 298 (481)
T ss_dssp ECCSSCCCTTCCTHHHHTTHHHHHHHHHHHHHTTTCSSSEEEECCCSTT-GGGTCCCCCCCCCCCSSSSCCEEECCBCCC
T ss_pred EeecCCCCCCCCCccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCcccc-cccCCCCCCcccCCCcccCCCEEEEEEecC
Confidence 99999986421 246799999999999999999999999853 32 111 12222211 2468999999997
Q ss_pred cC---CCCCCCCChhhhHHHHHHhhhhhHHHhhhcC-CCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEE
Q 013777 337 LF---SNNFNGLNVQQNIDYVNNQRASDLGAVTTSN-GPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAY 412 (436)
Q Consensus 337 ~~---~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~-~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~ 412 (436)
++ +..+.....+.....+.. ....+..+.+.. +.|++|||||..... +...+|++.+++.+++.++||+|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~Pv~igEfG~~~~~-----~~~~~~~~~~~~~~~~~~ig~~~ 372 (481)
T 2osx_A 299 LPLDIGDGHEGLARTLTDVTIDA-WRANTAHTARVLGDVPIILGSFGLDTTL-----PGARDYIERVYGTAREMGAGVSY 372 (481)
T ss_dssp HHHHHTTSSSHHHHHHHHHHHHH-HHHHHHHHHHHTTSCCBEECBCCCCTTS-----TTHHHHHHHHHHHHHHHTCEEEE
T ss_pred cccccCCccCccchhhHHHHHHH-HHHHHHHHHHHhcCCCEEEeccCCCCCc-----hHHHHHHHHHHHHHHHcCCCeEE
Confidence 63 111211111111112222 122333344444 666999999964321 23467888888888888899999
Q ss_pred Eceec
Q 013777 413 WAHKC 417 (436)
Q Consensus 413 W~~k~ 417 (436)
|+++.
T Consensus 373 W~~~~ 377 (481)
T 2osx_A 373 WSSDP 377 (481)
T ss_dssp SCCSS
T ss_pred ECCCC
Confidence 99986
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=286.62 Aligned_cols=256 Identities=19% Similarity=0.263 Sum_probs=177.1
Q ss_pred Hhhh-hcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 152 DHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 152 ~h~~-~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
.||. ++++++||+.|+++|||+|||||.|+.+..+.++..+++..+++||++|++|.++||+||||+|.... ++
T Consensus 63 ~~w~~~~~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~~~-~~---- 137 (395)
T 2jep_A 63 TAWGNPTVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGDGY-NS---- 137 (395)
T ss_dssp TTTSCCCCCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGGGC-TT----
T ss_pred cccCCCcCcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCccc-cC----
Confidence 5775 58899999999999999999999998665555445566778999999999999999999999998721 11
Q ss_pred CCCCCCCCCCC-------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC---C---hhHHHHHHHHHHHHHHh
Q 013777 231 SATRDGFQEWG-------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---A---LDTLKSYYKAGYDAVRK 297 (436)
Q Consensus 231 sg~~~~~~~w~-------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~---~---~~~~~~~~~~~~~aIR~ 297 (436)
+ ...|. +...+++.++|+.||+||+++|.|++|||+|||..... . .+.|..++++++++||+
T Consensus 138 ~-----~g~w~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~w~~~~~~~~~~~~~~~~~~~~aIR~ 212 (395)
T 2jep_A 138 V-----QGGWLLVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAYNQIFVDTVRQ 212 (395)
T ss_dssp S-----TTCCCCTTCSCHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCSCSCCSSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred C-----CCccccCCcccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 0 01222 23578899999999999999999999999999986321 1 25789999999999999
Q ss_pred hC---CCeEEEEeCCCCCCChh----hhh-c--------cCCCCCcEEEEEeecCcCCC----------CCC-CCChh--
Q 013777 298 YT---STAYVIMSNRLGPADHK----ELL-S--------FASGLSRVVIDVHYYNLFSN----------NFN-GLNVQ-- 348 (436)
Q Consensus 298 ~~---p~~~Viv~~~~~~~~~~----~~~-~--------~~~~~~nvv~~~H~Y~~~~~----------~~~-~~~~~-- 348 (436)
++ |+++|++++...+.++. .+. + .....+|+||++|+|.++.. +.. ..++.
T Consensus 213 ~~~~np~~~I~v~g~~~~~~~~~~~~~~~~p~d~~~~~~i~~~~~~~v~s~H~Y~~~~~~~~~~~~~~~W~~~~~~~~~~ 292 (395)
T 2jep_A 213 TGGNNNARWLLVPGWNTNIDYTVGNYGFTLPTDNYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAKK 292 (395)
T ss_dssp SSGGGGTSCEEEECGGGCHHHHHSSSSCCCCCCTTSCTTSCTTCCCEEEEEEECCSHHHHTCSSSSCCBCSTTCSCGGGB
T ss_pred hCCCCCCcEEEECCCccCcccccccccccCCCCccccccCCCCCCCEEEEEEecCCccccCcccccccccccccCCcccc
Confidence 95 57899997421111110 011 0 01134799999999987421 000 00110
Q ss_pred --hh-HHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC-Cc-CHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 349 --QN-IDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-DA-SKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 349 --~~-i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~-~~-~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
+. .+.+...+......+.+. +.||+|||||+..... +. +.+...+|++.+++.+++.++||+||+++..
T Consensus 293 ~~~~~~~~i~~~~~~~~~~~~~~-g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~W~~~~~ 366 (395)
T 2jep_A 293 STWGQEDYLESQFKSMYDKFVTQ-GYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKKYKMVPVYWDNGHN 366 (395)
T ss_dssp CSSCSHHHHHHHHHHHHHHTGGG-TCCEEEEEECCCCCTTTCTTHHHHHHHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cccCcHHHHHHHHHHHHHHHHHc-CCCEEEeeccccCCCCccCCChHHHHHHHHHHHHHHHHCCCeEEEECCCCC
Confidence 00 012222222222223333 5569999999865421 11 2345568999999999999999999999863
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=279.48 Aligned_cols=250 Identities=15% Similarity=0.224 Sum_probs=178.3
Q ss_pred EEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEec
Q 013777 98 IQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 177 (436)
Q Consensus 98 lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRip 177 (436)
|+++|..+++.+|.. |.+.|++ ....+ ++ .+ .+++|+.|+++|+|+||||
T Consensus 25 l~V~G~~l~d~nG~~----------~~lrGvn-~~~~~-----~~-------------~~-~~~~i~~lk~~G~N~VRip 74 (345)
T 3jug_A 25 FYVDGNTLYDANGQP----------FVMKGIN-HGHAW-----YK-------------DT-ASTAIPAIAEQGANTIRIV 74 (345)
T ss_dssp CEEETTEEECTTSCB----------CCCEEEE-ECGGG-----CG-------------GG-HHHHHHHHHHTTCSEEEEE
T ss_pred eEEECCEEEccCCCE----------EEEeccc-ccccc-----cC-------------hH-HHHHHHHHHHcCCCEEEEE
Confidence 889999999877763 4455554 11111 11 11 1579999999999999999
Q ss_pred CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHH
Q 013777 178 VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 257 (436)
Q Consensus 178 v~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ 257 (436)
+.. ..+|....++.||++|++|.++|||||||+|..+|+++ ....++++++|+.||+
T Consensus 75 ~~~--------~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~~g~~~---------------~~~~~~~~~~w~~iA~ 131 (345)
T 3jug_A 75 LSD--------GGQWEKDDIDTVREVIELAEQNKMVAVVEVHDATGRDS---------------RSDLDRAVDYWIEMKD 131 (345)
T ss_dssp ECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCC---------------HHHHHHHHHHHHHTHH
T ss_pred ecC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc---------------HHHHHHHHHHHHHHHH
Confidence 851 23566778999999999999999999999999875321 2467899999999999
Q ss_pred HhCCC-CceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhh-------hhccCCCCCcEE
Q 013777 258 RYANR-PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKE-------LLSFASGLSRVV 329 (436)
Q Consensus 258 ry~~~-~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~-------~~~~~~~~~nvv 329 (436)
|||++ +.|+ |||+|||.. ..+...|.++|++++++||+.+|+++|++++...+.++.. ++. .++.+|+|
T Consensus 132 ryk~~~~~Vi-~el~NEP~~-~~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w~~~~~~~~~~~~~~~~-~dp~~nlv 208 (345)
T 3jug_A 132 ALIGKEDTVI-INIANEWYG-SWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFN-ADPLKNTI 208 (345)
T ss_dssp HHTTCTTTEE-EECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHHHHHHHHHHH-TCTTCCEE
T ss_pred HHcCCCCeEE-EEecCCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCccccchhhccchhhhcc-cCCccceE
Confidence 99999 5665 999999986 3456789999999999999999999999985322233322 121 24578999
Q ss_pred EEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCc
Q 013777 330 IDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFG 409 (436)
Q Consensus 330 ~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~G 409 (436)
|++|.|... +.+.+. +. +.+..+. .++.|+||||||+....... .++.+++.+++++++
T Consensus 209 ys~H~Y~~~-----g~~~~~----~~----~~~~~~~-~~g~Pv~igEfG~~~~~~~~-------~~~~~l~~~~~~~i~ 267 (345)
T 3jug_A 209 FSIHMYEYA-----GGDANT----VR----SNIDRVI-DQDLALVIGEFGHRHTDGDV-------DEDTILSYSEETGTG 267 (345)
T ss_dssp EEEEESTTT-----TSSHHH----HH----HHHHHHH-TTTCCEEEEEECCCCCC--C-------CHHHHHHHHHHHTCE
T ss_pred EEEEecCCC-----CCCHHH----HH----HHHHHHH-HcCCcEEEECcCCCCCCCCH-------HHHHHHHHHHHcCCE
Confidence 999999432 122221 11 1222232 34556999999986542211 235666777778999
Q ss_pred EEEEceecCCCCCCh
Q 013777 410 WAYWAHKCEANHWSL 424 (436)
Q Consensus 410 w~~W~~k~~~~~Ws~ 424 (436)
|++|+|+..+..|++
T Consensus 268 w~~W~~~~~~~~~~~ 282 (345)
T 3jug_A 268 WLAWSWKGNSAEWDY 282 (345)
T ss_dssp EEESCSSCCCGGGGG
T ss_pred EEEEEEECCCCCccc
Confidence 999999987644443
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=273.43 Aligned_cols=220 Identities=15% Similarity=0.230 Sum_probs=158.8
Q ss_pred HHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW 240 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w 240 (436)
++|+.|+++|+|+||||+++.. .|....++.||++|++|.++||+||||+|..++.++. +.
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~--------~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~~~~~~~~---~~-------- 96 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGV--------RWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQ---SG-------- 96 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSS--------SSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTS---TT--------
T ss_pred HHHHHHHHcCCCEEEEEccCCc--------ccCCCCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCC---Cc--------
Confidence 7899999999999999997521 1222357999999999999999999999998875432 10
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC-hhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChh---
Q 013777 241 GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHK--- 316 (436)
Q Consensus 241 ~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~--- 316 (436)
+...+++.++|++||+||+++|.+++|||+|||.....+ .+.|..++++++++||+.+|+++|++++...+.++.
T Consensus 97 -~~~~~~~~~~w~~ia~~~k~~~~vv~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~ 175 (302)
T 1bqc_A 97 -ASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTM 175 (302)
T ss_dssp -CCCHHHHHHHHHHTHHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCHH
T ss_pred -hhhHHHHHHHHHHHHHHhcCCCCEEEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEECCCccccCchhhh
Confidence 245788999999999999999999999999999853211 134899999999999999999999998542223332
Q ss_pred -----hhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHH
Q 013777 317 -----ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 391 (436)
Q Consensus 317 -----~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~ 391 (436)
.++. ....+|+||++|.|.+++. .+.++. .+..+.+. +.|++|||||+........
T Consensus 176 ~~~~~~~~~-~~~~~~~v~s~H~Y~~~~~-------~~~~~~-------~~~~~~~~-~~Pv~igEfG~~~~~~~~~--- 236 (302)
T 1bqc_A 176 RNNADQVYA-SDPTGNTVFSIHMYGVYSQ-------ASTITS-------YLEHFVNA-GLPLIIGEFGHDHSDGNPD--- 236 (302)
T ss_dssp HHHHHHHHH-TCTTCCEEEEEEESGGGCS-------HHHHHH-------HHHHHHHH-TCCEEEEEECCTTSTTCCC---
T ss_pred hccchhccc-cCCCCCEEEEEEEccCCCC-------HHHHHH-------HHHHHHHC-CCCEEEEeecCCCCCCchH---
Confidence 2221 2346799999999987531 122221 11222233 4459999999865432111
Q ss_pred HHHHHHHHHHHHccCCCcEEEEceecCCCCCC
Q 013777 392 YQRFANAQLDVYGRATFGWAYWAHKCEANHWS 423 (436)
Q Consensus 392 ~~~~~~~q~~~~~~~~~Gw~~W~~k~~~~~Ws 423 (436)
++..++.++++++||++|+|+..+..++
T Consensus 237 ----~~~~~~~~~~~~i~~~~W~~~~~~~~~~ 264 (302)
T 1bqc_A 237 ----EDTIMAEAERLKLGYIGWSWSGNGGGVE 264 (302)
T ss_dssp ----HHHHHHHHHHHTCEEEESCSSCCCTTTG
T ss_pred ----HHHHHHHHHHcCCEEEEeeccCCCCCcc
Confidence 3444556666789999999998664443
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=268.06 Aligned_cols=217 Identities=18% Similarity=0.282 Sum_probs=157.6
Q ss_pred hcCCHHHHHHHH-hCCCCEEEecCccccccCCCCCCCC--c-cchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPF--V-GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 156 ~~ite~d~~~ia-~~G~N~VRipv~~~~~~~~~~~~~~--~-~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
.+++++||+.|+ ++|+|+||||+.|. +. +++ . ++.++.||++|++|.++||+||||+|..++
T Consensus 37 ~~~~~~d~~~l~~~~G~N~vR~~~~~~---~~---~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h~~~~-------- 102 (291)
T 1egz_A 37 KFYTADTVASLKKDWKSSIVRAAMGVQ---ES---GGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA-------- 102 (291)
T ss_dssp GGCSHHHHHHHHHTTCCCEEEEEEECS---ST---TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG--------
T ss_pred ccCCHHHHHHHHHHcCCCEEEEecccc---cc---CCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEcCCCCc--------
Confidence 568999999999 89999999999863 11 122 2 247999999999999999999999998642
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCC-C
Q 013777 232 ATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-L 310 (436)
Q Consensus 232 g~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~-~ 310 (436)
+...+++.++|++||+||+++|+|+ |||+|||.... ..+.|.+++++++++||+.+|+++|++++. |
T Consensus 103 ----------~~~~~~~~~~~~~ia~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~ 170 (291)
T 1egz_A 103 ----------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQVS-WSNTIKPYAEAVISAIRAIDPDNLIIVGTPSW 170 (291)
T ss_dssp ----------GGGHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHH
T ss_pred ----------chhHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCCCc-hHHHHHHHHHHHHHHHHhcCCCCEEEECCCCc
Confidence 2567899999999999999999998 99999998532 135799999999999999999999999752 3
Q ss_pred CCCChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC-C-cC
Q 013777 311 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-D-AS 388 (436)
Q Consensus 311 ~~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~-~-~~ 388 (436)
. .+.......+..++|+||++|.|.+.. ++.+.. .+.... ..+.|++|||||+..... + ..
T Consensus 171 ~-~~~~~~~~~p~~~~~~~~s~H~Y~~~~--------~~~~~~-------~~~~~~-~~~~Pv~igEfG~~~~~~~g~~~ 233 (291)
T 1egz_A 171 S-QNVDEASRDPINAKNIAYTLHFYAGTH--------GESLRN-------KARQAL-NNGIALFVTEWGTVNADGNGGVN 233 (291)
T ss_dssp H-TCHHHHHTSCCCSSSEEEEEEEETTTC--------CHHHHH-------HHHHHH-HTTCCEEEEEEESSCTTSCSCCC
T ss_pred c-cccchhhcCCCCCCCEEEEEEecCCCC--------hHHHHH-------HHHHHH-HCCCcEEEecccCcCCCCCCCcC
Confidence 2 222222111223479999999997521 111211 111222 335569999999865321 1 22
Q ss_pred HHHHHHHHHHHHHHHccCCCcEEEEceecCC
Q 013777 389 KQDYQRFANAQLDVYGRATFGWAYWAHKCEA 419 (436)
Q Consensus 389 ~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~ 419 (436)
.+... .+++.+++.++||++|+|+..+
T Consensus 234 ~~~~~----~~~~~~~~~~~g~~~W~~~~~~ 260 (291)
T 1egz_A 234 QTETD----AWVTFMRDNNISNANWALNDKN 260 (291)
T ss_dssp HHHHH----HHHHHHHHTTCCEEEEEECCSS
T ss_pred HHHHH----HHHHHHHHCCCeEEEEecCCCC
Confidence 23333 3445667788999999999854
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-33 Score=286.05 Aligned_cols=247 Identities=15% Similarity=0.209 Sum_probs=177.5
Q ss_pred ceEEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEE
Q 013777 96 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 175 (436)
Q Consensus 96 ~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VR 175 (436)
.+|+++|..+++++|.. |.+.|++. .++ |....+++||+.|+++|+|+||
T Consensus 8 ~~l~v~G~~i~d~nG~~----------v~lrGvN~-~~~-------------------W~~~~~~~di~~ik~~G~N~VR 57 (464)
T 1wky_A 8 SGFYVSGTTLYDANGNP----------FVMRGINH-GHA-------------------WYKDQATTAIEGIANTGANTVR 57 (464)
T ss_dssp CCCEEETTEEECTTSCB----------CCCEEEEE-CGG-------------------GCGGGHHHHHHHHHTTTCSEEE
T ss_pred CCeEEeCCEEECCCCCE----------EEEEEEEe-Ccc-------------------cCCcchHHHHHHHHHCCCCEEE
Confidence 57889999999877763 44555552 211 3233368999999999999999
Q ss_pred ecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Q 013777 176 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFL 255 (436)
Q Consensus 176 ipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~l 255 (436)
||+.. +.+|.++.+++||++|++|.++||+||||+|..++.++ ....++++++|++|
T Consensus 58 ipv~~--------g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~~~g~~~---------------~~~~~~~~~~w~~i 114 (464)
T 1wky_A 58 IVLSD--------GGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDS---------------IASLNRAVDYWIEM 114 (464)
T ss_dssp EEECC--------SSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCC---------------HHHHHHHHHHHHHT
T ss_pred EEcCC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCCC---------------hHHHHHHHHHHHHH
Confidence 99962 12455668999999999999999999999999876432 25678999999999
Q ss_pred HHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCC-CCCCChh-------hhhccCCCCCc
Q 013777 256 AARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGPADHK-------ELLSFASGLSR 327 (436)
Q Consensus 256 A~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~-~~~~~~~-------~~~~~~~~~~n 327 (436)
|+||+++|..++|||+|||... .+...|.++|++++++||+++|+++|++++. |.. ... .++ ..++.+|
T Consensus 115 A~ryk~~~~~Vi~eL~NEP~~~-~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w~~-~~~~~~~~~~~l~-~~dp~~n 191 (464)
T 1wky_A 115 RSALIGKEDTVIINIANEWFGS-WDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQ-FPQSIHDYGREVF-NADPQRN 191 (464)
T ss_dssp GGGTTTCTTTEEEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTT-BTHHHHHHHHHHH-HTCTTCC
T ss_pred HHHHcCCCCeEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCcCc-ccccccccchhcc-ccCCCCC
Confidence 9999999544469999999863 4567899999999999999999999999853 432 211 222 1234679
Q ss_pred EEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCC
Q 013777 328 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRAT 407 (436)
Q Consensus 328 vv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~ 407 (436)
+||++|+|.++. .. .+. +.. .+..+.+ .+.|+||||||+........ .+..++.+++++
T Consensus 192 iv~s~H~Y~~~g-----~~-~~~---i~~----~~~~~~~-~g~Pv~igEfG~~~~~~~~~-------~~~~~~~~~~~~ 250 (464)
T 1wky_A 192 TMFSIHMYEYAG-----GN-ASQ---VRT----NIDRVLN-QDLALVIGEFGHRHTNGDVD-------ESTIMSYSEQRG 250 (464)
T ss_dssp EEEEEEESTTTS-----SS-HHH---HHH----HHHHHHT-TTCCEEEEEECSEETTEECC-------HHHHHHHHHHTT
T ss_pred EEEEEEEECCCC-----CC-HHH---HHH----HHHHHHH-cCCCEEEECccCCCCCCcHH-------HHHHHHHHHHcC
Confidence 999999997542 11 122 221 1222222 35569999999864321111 245556677789
Q ss_pred CcEEEEceecCC
Q 013777 408 FGWAYWAHKCEA 419 (436)
Q Consensus 408 ~Gw~~W~~k~~~ 419 (436)
+||++|+|+..+
T Consensus 251 igw~~W~~~~~~ 262 (464)
T 1wky_A 251 VGWLAWSWKGNG 262 (464)
T ss_dssp CEEEESCSSCCC
T ss_pred CeEEEEEEcCCC
Confidence 999999999864
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-33 Score=270.95 Aligned_cols=251 Identities=19% Similarity=0.261 Sum_probs=172.8
Q ss_pred ceEEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHH-hCCCCEE
Q 013777 96 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAV 174 (436)
Q Consensus 96 ~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia-~~G~N~V 174 (436)
.+|+++|..+++.+|.. |.+.|++.....| ...+++++||+.|+ ++|+|+|
T Consensus 9 ~~l~v~G~~i~d~~G~~----------v~l~Gvn~~~~~w------------------~~~~~~~~d~~~l~~~~G~N~v 60 (306)
T 2cks_A 9 GKVQVCGTQLCDEHGNP----------VQLRGMSTHGIQW------------------FDHCLTDSSLDALAYDWKADII 60 (306)
T ss_dssp CSCEEETTEEECTTSCB----------CCCEEEECCCHHH------------------HGGGCSHHHHHHHHHTSCCSEE
T ss_pred CeEEEECCEEECCCCCE----------EEEEEEecCcccc------------------cCcCCCHHHHHHHHHHcCCCEE
Confidence 46788899998766652 3344544221111 12357899999886 6999999
Q ss_pred EecCccccccCCCCCCCCcc-chHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Q 013777 175 RIPVGWWIANDPTPPKPFVG-GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253 (436)
Q Consensus 175 Ripv~~~~~~~~~~~~~~~~-~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~ 253 (436)
|||+.|. . .+.+.++ +.+++||++|++|.++||+||||+|..+++. . ..+.+++.++|+
T Consensus 61 Ri~~~~~---~--~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild~h~~~~g~--------~-------~~~~~~~~~~~~ 120 (306)
T 2cks_A 61 RLSMYIQ---E--DGYETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPGD--------P-------HYNLDRAKTFFA 120 (306)
T ss_dssp EEEEESS---T--TSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSCC--------G-------GGGHHHHHHHHH
T ss_pred EEEeeec---C--CCcccCHHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCC--------c-------ccCHHHHHHHHH
Confidence 9999863 1 1112233 3789999999999999999999999974210 0 135788999999
Q ss_pred HHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCC-CCCC------ChhhhhccCCCCC
Q 013777 254 FLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGPA------DHKELLSFASGLS 326 (436)
Q Consensus 254 ~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~-~~~~------~~~~~~~~~~~~~ 326 (436)
+||+||+++|+|+ |||+|||.. .+...|+.++++++++||+.+|+++|++++. |... +.......+....
T Consensus 121 ~ia~~y~~~~~V~-~el~NEP~~--~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~~~p~~~~ 197 (306)
T 2cks_A 121 EIAQRHASKTNVL-YEIANEPNG--VSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPVNAS 197 (306)
T ss_dssp HHHHHHTTCSSEE-EECCSCCCS--SCHHHHHHHHHHHHHHHHHHCTTCCEEECCHHHHSTTGGGTCCTHHHHHSCCSCS
T ss_pred HHHHHhCCCCcEE-EEcCCCCCC--CCHHHHHHHHHHHHHHHHHhCCCCEEEECCCCccccccccccchhhhhcCCCCcC
Confidence 9999999999998 999999985 3567899999999999999999999999852 2211 1222222222357
Q ss_pred cEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC--CcCHHHHHHHHHHHHHHHc
Q 013777 327 RVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK--DASKQDYQRFANAQLDVYG 404 (436)
Q Consensus 327 nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~--~~~~~~~~~~~~~q~~~~~ 404 (436)
|+||++|+|.++.. +...+. +.... . +.|+||||||+..... ..+.+...+| ++.++
T Consensus 198 ~~v~s~H~Y~~~~~-------~~~~~~--------~~~~~-~-~~Pv~igEfG~~~~~g~~~~~~~~~~~~----~~~~~ 256 (306)
T 2cks_A 198 NIMYAFHFYAASHR-------DNYLNA--------LREAS-E-LFPVFVTEFGTETYTGDGANDFQMADRY----IDLMA 256 (306)
T ss_dssp SEEEEEEEETTTCC-------HHHHHH--------HHHHH-H-HSCEEEEEEESSCTTSCSCCCHHHHHHH----HHHHH
T ss_pred CeEEEEeeCCCCcc-------HHHHHH--------HHHHh-c-CCcEEEEcccCCcCCCCCCcCHHHHHHH----HHHHH
Confidence 99999999987421 111111 11111 2 3459999999865311 1233333333 45666
Q ss_pred cCCCcEEEEceecC
Q 013777 405 RATFGWAYWAHKCE 418 (436)
Q Consensus 405 ~~~~Gw~~W~~k~~ 418 (436)
+.++||++|+|+..
T Consensus 257 ~~~ig~~~W~~~~~ 270 (306)
T 2cks_A 257 ERKIGWTKWNYSDD 270 (306)
T ss_dssp HHTCCEEEECCSCC
T ss_pred HcCCCeEEEecCCC
Confidence 67899999999875
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=283.92 Aligned_cols=275 Identities=17% Similarity=0.195 Sum_probs=187.8
Q ss_pred CCceEEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCE
Q 013777 94 NGMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINA 173 (436)
Q Consensus 94 nG~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~ 173 (436)
.-.+|+++|+.+++.+|.. |.+.|++....++.. .... ..++||+.|+++|+|+
T Consensus 48 ~~~~l~v~G~~~~d~nG~~----------~~l~Gvn~~~~~~~~------------~~g~----~~~~di~~ik~~G~N~ 101 (359)
T 4hty_A 48 QLPLIKVEGNRFVDEQGKT----------IVFRGVNISDPDKID------------KDKR----FSKKHFEVIRSWGANV 101 (359)
T ss_dssp CCCCCEEETTEEECTTCCE----------ECCEEEEECCHHHHH------------HTTC----CSHHHHHHHHHTTCSE
T ss_pred CCCcEEEeCCEEECCCCCE----------EEEEEEecCCcccCC------------CCCC----cCHHHHHHHHhcCCCE
Confidence 3467889999999877763 555666633222211 1112 2489999999999999
Q ss_pred EEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Q 013777 174 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253 (436)
Q Consensus 174 VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~ 253 (436)
||||+.++.+... ..+..++.||++|++|.++||+||||+|..++.+++.... +.| ....++++++|+
T Consensus 102 VRi~~~~~~~~~~-----~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~------~~~-~~~~~~~~~~~~ 169 (359)
T 4hty_A 102 VRVPVHPRAWKER-----GVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSEMFQN------NSY-HTTKGETFDFWR 169 (359)
T ss_dssp EEEEECHHHHHHH-----HHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTTEESS------GGG-CCCHHHHHHHHH
T ss_pred EEEeccHHHhhcc-----CCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcccccC------Ccc-hhHHHHHHHHHH
Confidence 9999988754321 1245899999999999999999999999987654321110 000 124788999999
Q ss_pred HHHHHhCCCCceeEEEeecCCCCC-----CCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhccCCCCCcE
Q 013777 254 FLAARYANRPSLAAIELINEPLAP-----GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRV 328 (436)
Q Consensus 254 ~lA~ry~~~~~v~g~eL~NEP~~~-----~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~~~~~~~nv 328 (436)
.||+||+++|+|++|||+|||... ..+.+.|+.++++++++||+.+|+++|++++...+.+...+...+...+|+
T Consensus 170 ~la~ryk~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~w~~~~~~~~~~p~~~~n~ 249 (359)
T 4hty_A 170 RVSERYNGINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVAGFNWAYDLKEAAANPIDRQNI 249 (359)
T ss_dssp HHHHHTTTCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECHHHHTCCHHHHHSCCSSSSE
T ss_pred HHHHHhCCCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcCcccccccchhhcCCCCCCCE
Confidence 999999999999999999999853 245688999999999999999999999998532223334443333346899
Q ss_pred EEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC-CcC--HHHHHHHHHHHHHHHcc
Q 013777 329 VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-DAS--KQDYQRFANAQLDVYGR 405 (436)
Q Consensus 329 v~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~-~~~--~~~~~~~~~~q~~~~~~ 405 (436)
+|++|+|.++. ..+... .+...+..+. . +.|+||||||...... +.. .....+|.+..++.+++
T Consensus 250 ~ys~H~Y~~~~----~~~~~~-------~~~~~~~~~~-~-~~Pv~vtEfG~~~~~g~g~~~~~~~~~~y~~~~~~~~~~ 316 (359)
T 4hty_A 250 AYVSHPYPQKV----GAPYQA-------NWERDFGFMA-D-KYPVFATEIGYQRATDKGAHIPVIDDGSYGPRITDYFNS 316 (359)
T ss_dssp EEECCCCTTSS----CSSHHH-------HHHHHTGGGG-G-TSCEEEEEECCBCTTSTTCCTTSBCCSTHHHHHHHHHHH
T ss_pred EEEEEeCCCCC----CcchHH-------HHHHHHHHHh-c-CCCEEEecccCCCCCCCCcccccccHHHHHHHHHHHHHH
Confidence 99999998742 112211 1111222222 2 4569999999864321 110 00112344444555566
Q ss_pred CCCcEEEEceecCC
Q 013777 406 ATFGWAYWAHKCEA 419 (436)
Q Consensus 406 ~~~Gw~~W~~k~~~ 419 (436)
.++||++|+|.+..
T Consensus 317 ~~i~~~~Ws~~~~~ 330 (359)
T 4hty_A 317 KGISWVAWVFDPDW 330 (359)
T ss_dssp HTCEEEEEEESSSS
T ss_pred cCCeEEEEEeCCCC
Confidence 78999999999864
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=276.20 Aligned_cols=250 Identities=16% Similarity=0.201 Sum_probs=168.5
Q ss_pred CceEEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEE
Q 013777 95 GMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAV 174 (436)
Q Consensus 95 G~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~V 174 (436)
-.+|+++|+.+|+++|. | + .++ |.. .||.+|++++||+.|+++|||+|
T Consensus 9 ~~~l~v~G~~ivd~~G~--------~--l--rGv-------------~~~-------~~w~~~~~~~d~~~i~~~G~N~V 56 (491)
T 2y8k_A 9 RPRLNAARTTFVGDNGQ--------P--L--RGP-------------YTS-------TEWTAAAPYDQIARVKELGFNAV 56 (491)
T ss_dssp CCEECTTSSSEECTTSC--------B--C--EEE-------------EEE-------CSSSCCCCHHHHGGGGGGTCCEE
T ss_pred CceEEeCCCEEECCCCC--------E--e--ecc-------------ccc-------CCcCCCCCHHHHHHHHHcCCCEE
Confidence 46788899999887665 2 2 221 100 14666789999999999999999
Q ss_pred EecCccccccCCCCCCCCcc-chHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Q 013777 175 RIPVGWWIANDPTPPKPFVG-GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253 (436)
Q Consensus 175 Ripv~~~~~~~~~~~~~~~~-~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~ 253 (436)
|||+.||...-+.+ ....+ ..|++||++|++|.++||+||||+|.. .+++ ..+.++++++|+
T Consensus 57 Ripv~~~~~~~~~~-~~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~--~~~~--------------~~~~~~~~~~w~ 119 (491)
T 2y8k_A 57 HLYAECFDPRYPAP-GSKAPGYAVNEIDKIVERTRELGLYLVITIGNG--ANNG--------------NHNAQWARDFWK 119 (491)
T ss_dssp EEEEEECCTTTTST-TCCCTTTTHHHHHHHHHHHHHHTCEEEEEEECT--TCTT--------------CCCHHHHHHHHH
T ss_pred EECceeecccccCC-CccChhHHHHHHHHHHHHHHHCCCEEEEECCCC--CCCc--------------cccHHHHHHHHH
Confidence 99998864211111 12233 369999999999999999999999973 1110 034688999999
Q ss_pred HHHHHhCCCCceeEEEeecCCCCCC-CCh------hHHHHHHHHHHHHHHhhCCCeEEEEeCC--CCC-CCh----hhh-
Q 013777 254 FLAARYANRPSLAAIELINEPLAPG-VAL------DTLKSYYKAGYDAVRKYTSTAYVIMSNR--LGP-ADH----KEL- 318 (436)
Q Consensus 254 ~lA~ry~~~~~v~g~eL~NEP~~~~-~~~------~~~~~~~~~~~~aIR~~~p~~~Viv~~~--~~~-~~~----~~~- 318 (436)
+||+|||++|.|+ |||+|||.... ... ..|.+++++++++||+++|+++|++++- +.. ..+ ..+
T Consensus 120 ~iA~ryk~~p~Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~~~~g~~~~~~~~~~l~ 198 (491)
T 2y8k_A 120 FYAPRYAKETHVL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGGKGGAAEALKDIR 198 (491)
T ss_dssp HHHHHHTTCTTEE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSCEEEEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCceE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcEEEEecccccCCCcccchhhcccc
Confidence 9999999999998 99999997421 111 2399999999999999999999999731 100 001 111
Q ss_pred ------h-ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccC-CCC-CcCH
Q 013777 319 ------L-SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEW-NVK-DASK 389 (436)
Q Consensus 319 ------~-~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~-~~~-~~~~ 389 (436)
+ ..+....|+||++|+|.+.. . .+. .+....+ ++.|+||||||+.. ... +...
T Consensus 199 ~~~~~~~~~~~~~~~n~v~s~H~Y~~~~---------~----~~~----~l~~~~~-~g~Pv~igEfG~~~~~~~~~~~~ 260 (491)
T 2y8k_A 199 AFNKAVFGNENAVWTNEAVAFHGYAGWQ---------E----TTI----AVEELLK-AGYPCFMTEYAGGAWGSGMGGLD 260 (491)
T ss_dssp HHHHHHHSSTTCCCSSEEEEEESTTCHH---------H----HHH----HHHHHHH-TTCCEEEEECCCC--CCSCSSCC
T ss_pred cccccccccCCCCCCceeEEEeeCCCCc---------c----cHH----HHHHHHH-cCCCEEEEeecccccCCCCcchh
Confidence 1 01124578999999997521 1 111 1222223 35569999999653 211 1111
Q ss_pred HHHHHHHHHHHHHHccCCCcEEEEceecCC
Q 013777 390 QDYQRFANAQLDVYGRATFGWAYWAHKCEA 419 (436)
Q Consensus 390 ~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~ 419 (436)
. +.++.++++++||++|+|++.+
T Consensus 261 ~-------~~~~~~~~~~i~w~~W~~~~~~ 283 (491)
T 2y8k_A 261 V-------ELTYELERLGVSWLTFQYIPPT 283 (491)
T ss_dssp H-------HHHHHHHHHTCEEEEEEECTTC
T ss_pred H-------HHHHHHHhcCcceEEEeccCCC
Confidence 1 2235566788999999998643
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.9e-26 Score=227.66 Aligned_cols=256 Identities=13% Similarity=0.140 Sum_probs=160.6
Q ss_pred HHHHHHHHhCCCCEEEecCcc---ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCC---CCCCCCC----
Q 013777 160 DEDFKFLSSNGINAVRIPVGW---WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP---GSQNGNE---- 229 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~---~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~p---g~qng~~---- 229 (436)
++||+.||++|+|+||+++.- |...++. ++.|++..++.||++|++|+++||+||||||... |+.+...
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~-~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~~w~~ 123 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSA-PGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAV 123 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEE-TTEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCC-CCccCHHHHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHHHHHh
Confidence 899999999999999997631 3222332 3457777899999999999999999999999632 2100000
Q ss_pred CCCCC--CCCCCCC-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCCCC-ChhHHHHHHHHHHHHHHh
Q 013777 230 HSATR--DGFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRK 297 (436)
Q Consensus 230 ~sg~~--~~~~~w~-~~~~~~~~~~~~~lA~r--------y~~~~~v~g~eL~NEP~~~~~-~~~~~~~~~~~~~~aIR~ 297 (436)
..|.. .....|. +...+.+.++|+.|++| |+++|.|++|+|+|||..... +.+.+..|+++++++||+
T Consensus 124 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~n~~tg~~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~ 203 (373)
T 1rh9_A 124 QRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKS 203 (373)
T ss_dssp HTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCchhhcccCHHHHHHHHHHHHHHHhccCccCCccccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHHHh
Confidence 00000 0112343 67788999999999999 999999999999999986422 347899999999999999
Q ss_pred hCCCeEEEEeC-CCCCC-----Chhhh---hccC--CCCCc-EEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHh
Q 013777 298 YTSTAYVIMSN-RLGPA-----DHKEL---LSFA--SGLSR-VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAV 365 (436)
Q Consensus 298 ~~p~~~Viv~~-~~~~~-----~~~~~---~~~~--~~~~n-vv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~ 365 (436)
.+|+++|+++. ++... ++..+ .++. ...++ .++++|.|.... ....+...............+...
T Consensus 204 ~dp~~~v~~g~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~~s~H~Y~~~~--~~~~~~~~~~~~~~~~l~~~~~~~ 281 (373)
T 1rh9_A 204 IDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQW--LPGLTQEAQDKWASQWIQVHIDDS 281 (373)
T ss_dssp HCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTSTTCCCEEEECCHHHH--STTSCHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCceEEeCcccccCCCCCcCCccccccccchhhhccCCCcCeEEEeeCCccc--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999998863 22111 11111 0110 12233 489999996310 111222222222211111122222
Q ss_pred hhcCCCeEEeecccccCCCCCcCHHHHHHHHH----HHHHHHcc--CCCcEEEEceecCC
Q 013777 366 TTSNGPLTFVGEWTCEWNVKDASKQDYQRFAN----AQLDVYGR--ATFGWAYWAHKCEA 419 (436)
Q Consensus 366 ~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~----~q~~~~~~--~~~Gw~~W~~k~~~ 419 (436)
.+. +.|++|+|||......+.+.+...+|++ .+.+.+.+ ...|++||+|+..+
T Consensus 282 ~~~-~kP~~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 340 (373)
T 1rh9_A 282 KML-KKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQG 340 (373)
T ss_dssp HHH-TSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCTT
T ss_pred Hhc-CCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeEeeeecCCCC
Confidence 223 5569999999865432333444445544 33333332 35899999999864
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-26 Score=226.45 Aligned_cols=250 Identities=16% Similarity=0.150 Sum_probs=163.8
Q ss_pred HHHHHHHHhCCCCEEEecCcc---------ccccCCCCCCCCc--------cchHHHHHHHHHHHHHcCCEEEEEcCCC-
Q 013777 160 DEDFKFLSSNGINAVRIPVGW---------WIANDPTPPKPFV--------GGSSKVLDNAFDWAEKYGVKVIVDLHAA- 221 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~---------~~~~~~~~~~~~~--------~~~l~~ld~~v~~a~~~Gi~VilDlH~~- 221 (436)
+++|+.|+++|+|+||+++.. |...+|.+ +.|+ +..|+.||++|++|+++||+||||||..
T Consensus 46 ~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~-G~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~~w 124 (383)
T 3pzg_A 46 DSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEP-GVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVNNW 124 (383)
T ss_dssp HHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBT-TBCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCBSS
T ss_pred HHHHHHHHHcCCCEEEEeccccccccccccccccccCC-CcccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccccc
Confidence 789999999999999998753 33445533 4565 6789999999999999999999999963
Q ss_pred --CCCCCCC-CCCCCCCCCCCCC-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCCC-CChhHHHHHH
Q 013777 222 --PGSQNGN-EHSATRDGFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPG-VALDTLKSYY 288 (436)
Q Consensus 222 --pg~qng~-~~sg~~~~~~~w~-~~~~~~~~~~~~~lA~r--------y~~~~~v~g~eL~NEP~~~~-~~~~~~~~~~ 288 (436)
.|+...+ ...+.......|. +..++.+.++|+.|++| |+++|.|++|||+|||.... .+.+.+..|+
T Consensus 125 ~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~tG~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~ 204 (383)
T 3pzg_A 125 DDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWV 204 (383)
T ss_dssp STTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHH
T ss_pred cccCCccchhhhcCCCccccccCCHHHHHHHHHHHHHHHhhhccccCcccCCCCcEEEEEecCCCCcccCccHHHHHHHH
Confidence 2211100 0001000111232 67789999999999999 99999999999999998643 2357899999
Q ss_pred HHHHHHHHhhCCCeEEEEeC-CCCC-C----------Chh-------hhhccCCCCCcEEEEEeecCcCCCCCCCCChhh
Q 013777 289 KAGYDAVRKYTSTAYVIMSN-RLGP-A----------DHK-------ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ 349 (436)
Q Consensus 289 ~~~~~aIR~~~p~~~Viv~~-~~~~-~----------~~~-------~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~ 349 (436)
++++++||+.+|+++|+++. ++.. . ++. .|........-.++++|.|+.. + ..+.++
T Consensus 205 ~~~~~~IR~~Dp~~lVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~g~df~~~~~~~~iD~~t~H~Yp~~--w--~~~~~~ 280 (383)
T 3pzg_A 205 KEMSSYIKSLDPNHLVAVGDEGFFSNYEGFKPYGGEAEWAYNGWSGVDWKKLLSIETVDFGTFHLYPSH--W--GVSPEN 280 (383)
T ss_dssp HHHHHHHHHHCSSSEEECCCCCCCBCCTTCCCGGGTTGGGTBTTTSCCHHHHHTCTTCCSEEEEECHHH--H--TCCGGG
T ss_pred HHHHHHHHhhCCCceEEEcccccccccccccccCCCCccccccccCCChHhhcCCCCCCEEEEEecccc--c--CcChHH
Confidence 99999999999999999873 3321 0 000 1111101112257999999641 1 123343
Q ss_pred hHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 350 NIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 350 ~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
.+++..+...+.+....+ .++|++++|||..........+.+..++.. +++..+.|+.||++...
T Consensus 281 ~~~~~~~wi~~h~~~a~~-~gKPvv~eEfG~~~~~~~~r~~~~~~~~~~---~~~~~~~g~~~Wq~~~~ 345 (383)
T 3pzg_A 281 YAQWGAKWIEDHIKIAKE-IGKPVVLEEYGIPKSAPVNRTAIYRLWNDL---VYDLGGDGAMFWMLAGI 345 (383)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTCCEEEEEECCCTTSSSCHHHHHHHHHHH---HHHTTCCEEEESCBCCB
T ss_pred HHHHHHHHHHHHHHHHHh-cCCCEEEEecCCCCCChhHHHHHHHHHHHH---HHHhCCcceEEEEecCc
Confidence 344433333333333333 466799999997653211222334455443 44556789999999875
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=222.15 Aligned_cols=241 Identities=18% Similarity=0.197 Sum_probs=151.9
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCC-----------CCCCc--cchHHHHHHHHHHHHHcCCEEEEEcCCCC---C
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTP-----------PKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLHAAP---G 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~-----------~~~~~--~~~l~~ld~~v~~a~~~Gi~VilDlH~~p---g 223 (436)
++||+.||++|+|+||+|+.++....|.. ...++ +..++.||+++++|.++||+||||+|... |
T Consensus 39 ~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~~w~~~g 118 (344)
T 1qnr_A 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYG 118 (344)
T ss_dssp HHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTS
T ss_pred HHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEeccCccccC
Confidence 79999999999999999875532111111 11233 56799999999999999999999999531 1
Q ss_pred CCCCC-CCCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCC
Q 013777 224 SQNGN-EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 224 ~qng~-~~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
+++.+ ...|.. ....|. +...+.+.++|+.|++||+++|+|++|+|.|||.....+.+.+..|+++++++||+++|+
T Consensus 119 ~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~dp~ 197 (344)
T 1qnr_A 119 GINAYVNAFGGN-ATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSN 197 (344)
T ss_dssp HHHHHHHHHCSC-TTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHhCCC-hhhhcCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEcccCcccCCCChHHHHHHHHHHHHHHHhcCCC
Confidence 10000 000000 112233 567788999999999999999999999999999864456688999999999999999999
Q ss_pred eEEEEeC-CCCCC----Chh-------hhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcC
Q 013777 302 AYVIMSN-RLGPA----DHK-------ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 369 (436)
Q Consensus 302 ~~Viv~~-~~~~~----~~~-------~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 369 (436)
++|+++. +++.. ... .+........-.++++|.|..... ... ......+... +. ..+..
T Consensus 198 ~~v~~g~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~D~~s~h~Y~~~~~--~~~--~~~~~~~~~~----~~-~~~~~ 268 (344)
T 1qnr_A 198 HLVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWG--TNY--TWGNGWIQTH----AA-ACLAA 268 (344)
T ss_dssp SEEECCCCCCCCTTSCCCGGGSSSSSCCHHHHHTCTTCCSEEEEECHHHHT--CCS--THHHHHHHHH----HH-HHHHT
T ss_pred CEEEECCccccCCCCCccCCccccccCcHHHHhCCCCCCeEEeeeCCCccC--ccc--hHHHHHHHHH----HH-HHHHc
Confidence 9998863 33111 000 011000112235899999974211 111 1111122111 11 11233
Q ss_pred CCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCC-CcEEEEceec
Q 013777 370 GPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRAT-FGWAYWAHKC 417 (436)
Q Consensus 370 ~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~-~Gw~~W~~k~ 417 (436)
+.|++|+|||..... ......|++..+ ...+ .|+++|+|..
T Consensus 269 ~kPv~l~E~G~~~~~----~~~~~~~~~~~~---~~~~~~g~~~W~~~d 310 (344)
T 1qnr_A 269 GKPCVFEEYGAQQNP----CTNEAPWQTTSL---TTRGMGGDMFWQWGD 310 (344)
T ss_dssp TSCEEEEEECCSSCH----HHHHHHHHHHHH---TSTTEEEEEESCEEC
T ss_pred CCCEEEeecCCCCCC----CchHHHHHHHHH---hcCCCCceEEEeccC
Confidence 556999999986531 122355554432 2233 5999999976
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-25 Score=220.30 Aligned_cols=232 Identities=12% Similarity=0.098 Sum_probs=145.4
Q ss_pred CHHHHHHHHhCCCCEEEecCccccccCC---CCCCC--CccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC-C
Q 013777 159 TDEDFKFLSSNGINAVRIPVGWWIANDP---TPPKP--FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS-A 232 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRipv~~~~~~~~---~~~~~--~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s-g 232 (436)
.++||+.|+++|+|+||||+.++....| .++.+ .++..++.||++|++|+++||+||||+|.. +.++ +
T Consensus 47 ~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~~~------~~~~~g 120 (353)
T 2c0h_A 47 FESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNG------AVKQST 120 (353)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEEC------SCCCTT
T ss_pred HHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEccCc------cccCCC
Confidence 4899999999999999999988744333 11111 123689999999999999999999999741 1111 1
Q ss_pred CCCCCCCCC-h-hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC---------------------------CChhH
Q 013777 233 TRDGFQEWG-D-SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG---------------------------VALDT 283 (436)
Q Consensus 233 ~~~~~~~w~-~-~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~---------------------------~~~~~ 283 (436)
.......+. + ...+.+.++|+.|++||+++|+|++|||+|||.... ...+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~a~ry~~~p~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 200 (353)
T 2c0h_A 121 HYRLNGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQE 200 (353)
T ss_dssp HHHHHHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHH
T ss_pred cccccceEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHHH
Confidence 000000011 1 222334477799999999999999999999998530 12267
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEEeC--CCCCCChhhhhcc----------CCCCCcE-EEEEeecCcCCCCCCCCChhhh
Q 013777 284 LKSYYKAGYDAVRKYTSTAYVIMSN--RLGPADHKELLSF----------ASGLSRV-VIDVHYYNLFSNNFNGLNVQQN 350 (436)
Q Consensus 284 ~~~~~~~~~~aIR~~~p~~~Viv~~--~~~~~~~~~~~~~----------~~~~~nv-v~~~H~Y~~~~~~~~~~~~~~~ 350 (436)
+.+++++++++||+++|+++|+++. .+...+....... ....+++ ++++|+|.+... +....
T Consensus 201 ~~~~~~~~~~~Ir~~dp~~~V~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~D~~s~H~Y~~~~~-~~~~~---- 275 (353)
T 2c0h_A 201 IGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNH-FGNES---- 275 (353)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTB-CCTTC----
T ss_pred HHHHHHHHHHHHHhhCCCCeEEECCccccCCCcccCcCCCCcchhhhhhccccCCCCCEEEEeeCCCccc-ccccC----
Confidence 8999999999999999999999873 1211110000000 0124566 999999975321 11000
Q ss_pred HHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCC-CcEEEEceec
Q 013777 351 IDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRAT-FGWAYWAHKC 417 (436)
Q Consensus 351 i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~-~Gw~~W~~k~ 417 (436)
.. ...+..+ ..+.|++|+|||+.... +. ++...++.+.+.+ +||++|+|..
T Consensus 276 -~~-----~~~~~~~--~~~~P~~i~E~G~~~~~-~~-------~~~~~~~~~~~~g~~g~~~W~~~d 327 (353)
T 2c0h_A 276 -PF-----KHSFSNF--RLKKPMVIGEFNQEHGA-GM-------SSESMFEWAYTKGYSGAWTWSRTD 327 (353)
T ss_dssp -TT-----SSCGGGG--CCSSCEEEEECCGGGST-TC-------CHHHHHHHHHHTTCSEEEESCSSS
T ss_pred -cc-----cchHHHh--cCCCCEEEEecCCCCCC-Cc-------cHHHHHHHHHHCCCcEEEEEEEcC
Confidence 00 0001111 12456999999986521 11 1223334444456 9999999988
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=223.57 Aligned_cols=257 Identities=11% Similarity=0.113 Sum_probs=158.1
Q ss_pred HHHHHHHHhCCCCEEEec-------Ccc--ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCC--
Q 013777 160 DEDFKFLSSNGINAVRIP-------VGW--WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN-- 228 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRip-------v~~--~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~-- 228 (436)
++||+.||++|||+||++ +.| |...++. ++.|++..|+.||++|++|.++||+|||+||..-....+.
T Consensus 65 ~~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~-~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~~~~~~~Gg~~~ 143 (440)
T 1uuq_A 65 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNG-FGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQ 143 (440)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSS-TTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHH
T ss_pred HHHHHHHHHcCCCEEEECcccCCCCCcccccccccCC-CCccCHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCchh
Confidence 799999999999999998 221 2222333 3467788999999999999999999999999531100000
Q ss_pred ---CCC-CC-C-----CC--------CCCCC-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCCCC--
Q 013777 229 ---EHS-AT-R-----DG--------FQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPGV-- 279 (436)
Q Consensus 229 ---~~s-g~-~-----~~--------~~~w~-~~~~~~~~~~~~~lA~r--------y~~~~~v~g~eL~NEP~~~~~-- 279 (436)
+.. +. . .+ ...|. +..++.+.++|+.|++| |+++|+|++|+|+|||.....
T Consensus 144 ~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp~~~~~~~ 223 (440)
T 1uuq_A 144 YMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQT 223 (440)
T ss_dssp HHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTC
T ss_pred hHHHhccCCCCCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCcccccCcc
Confidence 000 00 0 00 11233 56678899999999999 999999999999999986421
Q ss_pred ---ChhHHHHHHHHHHHHHHhhCCCeEEEEeC-CCCCC--ChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhH--
Q 013777 280 ---ALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPA--DHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI-- 351 (436)
Q Consensus 280 ---~~~~~~~~~~~~~~aIR~~~p~~~Viv~~-~~~~~--~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i-- 351 (436)
+.+.+.+|+++++++||++||+++|+++. ++.+. +...+........-.++++|.|.............+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~Ir~~Dp~~lV~~g~~g~~~~~~~~~~~~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~ 303 (440)
T 1uuq_A 224 TAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPS 303 (440)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHhhCCCCeEEECCccccCCCCcchhhHHhccCCCCCEEEEEeCCCccccCCCccccccHHH
Confidence 34678999999999999999999999863 22111 11112111111123489999997521111111222221
Q ss_pred --HHHHHhhhhhHHHhhhcCCCeEEeecccccCCC----CCcCHHHHHHHHHHHHHHHc----c--CCCcEEEEceecC
Q 013777 352 --DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV----KDASKQDYQRFANAQLDVYG----R--ATFGWAYWAHKCE 418 (436)
Q Consensus 352 --~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~----~~~~~~~~~~~~~~q~~~~~----~--~~~Gw~~W~~k~~ 418 (436)
..+.......+. ..+..++|++|+|||..... .+.+.+...+|++...+.+. + ...|++||+|...
T Consensus 304 ~~~~~~~~~~~~~~-~a~~~~kPvil~EfG~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~d~ 381 (440)
T 1uuq_A 304 AWEKAQNYMRAHID-VAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGY 381 (440)
T ss_dssp HHHHHHHHHHHHHH-HHHHHTCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEET
T ss_pred HHHHHHHHHHHHHH-HHHHhCCCEEEEeCCCCCCCCccCcCCChHHHHHHHHHHHHHHHHHHHhCCCceeEEEeeecCC
Confidence 111111111111 12223556999999976431 01234455566655443322 1 3579999999854
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-23 Score=202.73 Aligned_cols=234 Identities=17% Similarity=0.127 Sum_probs=147.6
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCC-------CCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPT-------PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSA 232 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~-------~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg 232 (436)
++||+.||++|+|+||||++......|. .+..+.+..++.+|+++++|.++||+||||+|.....+.+...
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~~~~~~~~~~~-- 122 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWNAAVNQDSHNR-- 122 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEECSSCCCGGGH--
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecccccccCCCCc--
Confidence 7899999999999999998654322221 0112345689999999999999999999999976543221100
Q ss_pred CCCCCCCC-C-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC---------------------------CCChhH
Q 013777 233 TRDGFQEW-G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP---------------------------GVALDT 283 (436)
Q Consensus 233 ~~~~~~~w-~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~---------------------------~~~~~~ 283 (436)
....+ . +...+.+.++|+.|++||+++|+|++|+|.|||... ....+.
T Consensus 123 ---~~~~~~~~~~~~~~~~~~~~~~v~r~kn~psi~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (351)
T 3vup_A 123 ---LDGLIKDQHKLQSYIDKALKPIVNHVKGHVALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQD 199 (351)
T ss_dssp ---HHHHHHCHHHHHHHHHHTHHHHHHHTTTCTTBCCEEEEECGGGGBCCSCCCSSGGGCCGGGTTSSTTTTCSCBCHHH
T ss_pred ---cccccCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEecccccccccccccccccccccchhhcccccccccccchhh
Confidence 00000 1 233455678899999999999999999999999641 123467
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEEeC-CC-CCCCh--------hh---hhccCCCCCcEEEEEeecCcCCCCCCCCChhhh
Q 013777 284 LKSYYKAGYDAVRKYTSTAYVIMSN-RL-GPADH--------KE---LLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQN 350 (436)
Q Consensus 284 ~~~~~~~~~~aIR~~~p~~~Viv~~-~~-~~~~~--------~~---~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~ 350 (436)
+.++++++.++||+.+|+++|.++. ++ ...+. .. +..........++++|.|..... +......
T Consensus 200 ~~~~~~~~~~~ik~~dp~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~s~h~Y~~~~~-~~~~~~~-- 276 (351)
T 3vup_A 200 ILRFLNWQADAIKTTDPGALVTMGVWNPKSNTDHFNMNNHYSDHCLRLAGGKQKGVFDFYQFHSYSWQGK-WDEVAPF-- 276 (351)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEESSGGGSCSSTTCCCTTSHHHHHHHHCCTTCSCSSEEEECCCBTTB-CCTTCGG--
T ss_pred HHHHHHHHHHHhhccCCCCeeEecCcccccccCccccccccccccccccccccccccceeeeeccCcccc-cchhhhH--
Confidence 8899999999999999999998873 11 00000 00 11111233456899999965322 1111100
Q ss_pred HHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 351 IDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 351 i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
. . . ......++|++|||||+..... ...+ +++. .+++....|.++|+|...
T Consensus 277 ---~----~-~--~~~~~~~kPvii~Efg~~~~~~-~~~~---~~~~---~~~~~~~~G~~~W~~~d~ 327 (351)
T 3vup_A 277 ---T----H-Q--ASDYGLHKPIVVGEFWEQDGGG-MTIT---QMFN---YVYNHGYAGAWSWHLVQR 327 (351)
T ss_dssp ---G----S-C--GGGGCCSSCEEEEECCGGGSTT-CCHH---HHHH---HHHHTTCSEEEEECHHHH
T ss_pred ---H----H-H--HHhcCCCCcEEEEeCCCCCCCC-cCHH---HHHH---HHHhcCCeEEEEEeeecC
Confidence 0 0 0 0112335569999998754322 2222 2222 234445579999999863
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-21 Score=189.98 Aligned_cols=248 Identities=13% Similarity=0.089 Sum_probs=148.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCC-----------------------CCCCccchHHHHHHHHHHHHHcCCEEEE
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTP-----------------------PKPFVGGSSKVLDNAFDWAEKYGVKVIV 216 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~-----------------------~~~~~~~~l~~ld~~v~~a~~~Gi~Vil 216 (436)
+++|+.|+++|+|+||+...+.....+.+ +..+.+..++.+|.++++|+++||+||+
T Consensus 40 ~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~v~~ 119 (387)
T 4awe_A 40 EKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGIKLIV 119 (387)
T ss_dssp HHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCCEEEE
Confidence 68899999999999999543211110000 0011234678899999999999999999
Q ss_pred EcCCCCCCCCCCCCC----CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC------------C
Q 013777 217 DLHAAPGSQNGNEHS----ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG------------V 279 (436)
Q Consensus 217 DlH~~pg~qng~~~s----g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~------------~ 279 (436)
++|.......+.... +.......+. +..++.+++.++.+++|||++|+|++|+|.|||.... .
T Consensus 120 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~k~~p~I~~w~l~NEp~~~~~~~~~~~~~~~~~ 199 (387)
T 4awe_A 120 ALTNNWADYGGMDVYTVNLGGKYHDDFYTVPKIKEAFKRYVKAMVTRYRDSEAILAWELANEARCGADGTRNLPRSEKGC 199 (387)
T ss_dssp ECCBSSSTTCCHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCSCCCTTTSCCCCSSSC
T ss_pred eecccccccCCCcccccccccccccccccCHHHHHHHHHHHHHHHhhcCCCcceeEeccCCCCCCCCCcccccccccccc
Confidence 999764322111000 0000011111 5667888999999999999999999999999998532 2
Q ss_pred ChhHHHHHHHHHHHHHHhhCCCeEEEEeC-CCCCC-Chhh-----------hhccCCCCCcEEEEEeecCcCCCCCCCCC
Q 013777 280 ALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPA-DHKE-----------LLSFASGLSRVVIDVHYYNLFSNNFNGLN 346 (436)
Q Consensus 280 ~~~~~~~~~~~~~~aIR~~~p~~~Viv~~-~~~~~-~~~~-----------~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~ 346 (436)
..+.+..++++++++||+.||+++|.++. ++... .... .........-.++++|.|..... ..
T Consensus 200 ~~~~~~~~~~~~~~~ik~~Dp~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~y~~~~~----~~ 275 (387)
T 4awe_A 200 TTETVTGWIEEMSAYVKSLDGNHLVTWGGEGGFNRGEDEEDGFYNGADGGDFDRELGLRNVDFGTMHLYPDWWS----KS 275 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCBCCC--CCTTTBTTTSCCHHHHHTCTTCCCEEEEECHHHHT----CC
T ss_pred chHHHHHHHHHHHHHHHHhCCCCcEEEcccccccCCCccccccccccccccchhcccCCccceeeecccccccc----hh
Confidence 35778999999999999999999999873 11110 0000 00000122346899999964211 11
Q ss_pred hhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCC---------CCcC-HHHHHHHHHHHHHHHccCCCcEEEEcee
Q 013777 347 VQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV---------KDAS-KQDYQRFANAQLDVYGRATFGWAYWAHK 416 (436)
Q Consensus 347 ~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~---------~~~~-~~~~~~~~~~q~~~~~~~~~Gw~~W~~k 416 (436)
.......+. ......+..++|++++|||..... .... ...+..|... .......|++||+|.
T Consensus 276 ~~~~~~~~~-----~~~~~~~~~~kp~~~~E~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~~W~~~ 347 (387)
T 4awe_A 276 IEWSNQWIH-----DHAASGRAANKPVVLEEYGWMTDKGRLDQLGQVKNETRLEVVGGWQKI---AIQEKLAGDMYWQFG 347 (387)
T ss_dssp HHHHHHHHH-----HHHHHHHHHTCCEEEEEECCCCHHHHHHHHSCCCCSCHHHHHHHHHHH---HHHHTCSEEEESCEE
T ss_pred hhhhHHHHH-----HHHHHHHhcCCCeeeccccccccCCCccchhhhhHHHHHHHHHHHHHH---HhCCCCeEEEEEEEc
Confidence 111111111 111122233556999999964321 1111 1223333332 233467899999998
Q ss_pred cCC
Q 013777 417 CEA 419 (436)
Q Consensus 417 ~~~ 419 (436)
..+
T Consensus 348 ~~~ 350 (387)
T 4awe_A 348 YGG 350 (387)
T ss_dssp CSC
T ss_pred CCC
Confidence 754
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-19 Score=176.32 Aligned_cols=237 Identities=17% Similarity=0.172 Sum_probs=158.5
Q ss_pred hhHHHHHhhhhcCCH-----HHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCC
Q 013777 146 APQVLQDHWDSYITD-----EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 220 (436)
Q Consensus 146 a~~~~~~h~~~~ite-----~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~ 220 (436)
.-..+++||.+|+++ ++++.|+++|+|+|||++ | .+|.+. ...++.+++++++|+++||+||||+|.
T Consensus 11 ~~~~~e~~g~~~~~~~G~~~d~~~ilk~~G~N~VRi~~--w--~~P~~g----~~~~~~~~~~~~~A~~~GlkV~ld~Hy 82 (332)
T 1hjs_A 11 SVVVEERAGVSYKNTNGNAQPLENILAANGVNTVRQRV--W--VNPADG----NYNLDYNIAIAKRAKAAGLGVYIDFHY 82 (332)
T ss_dssp THHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEE--C--SSCTTC----TTSHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHcCCEEECCCCCcccHHHHHHHCCCCEEEEee--e--eCCCCC----cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 345689999999998 899999999999999997 3 344321 126899999999999999999999997
Q ss_pred -----CCCCCCCCCCCCCCCCCCCCC---hhHHH----HHHHHHHHHHHHhCCCCceeEEEeecCCCCC-------CCCh
Q 013777 221 -----APGSQNGNEHSATRDGFQEWG---DSNVA----DTVAVIDFLAARYANRPSLAAIELINEPLAP-------GVAL 281 (436)
Q Consensus 221 -----~pg~qng~~~sg~~~~~~~w~---~~~~~----~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~-------~~~~ 281 (436)
.|++|+. ...|. +...+ .+.++++.|++++.. +..+.+.||+... ....
T Consensus 83 sd~WadPg~Q~~---------p~~W~~~~~~~~~~~~~yt~~vl~~l~~~g~~---~~~v~vGNEi~~g~~w~~g~~~~~ 150 (332)
T 1hjs_A 83 SDTWADPAHQTM---------PAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQ---PTIVSIGNEIRAGLLWPTGRTENW 150 (332)
T ss_dssp SSSCCBTTBCBC---------CTTCCCSHHHHHHHHHHHHHHHHHHHHHTTCC---CSEEEESSSGGGEETBTTEETTCH
T ss_pred CCCcCCccccCC---------ccccccchHHHHHHHHHHHHHHHHHHHHcCCC---CCEEEEeecccccccCcCCCccCH
Confidence 4776653 23453 22333 344455554443332 2336778887631 1256
Q ss_pred hHHHHHHHHHHHHHHhhC--CCeEEEEeCCCCCCCh---hhhhc----cC--CCCCcEEEEEeecCcCCCCCCCCChhhh
Q 013777 282 DTLKSYYKAGYDAVRKYT--STAYVIMSNRLGPADH---KELLS----FA--SGLSRVVIDVHYYNLFSNNFNGLNVQQN 350 (436)
Q Consensus 282 ~~~~~~~~~~~~aIR~~~--p~~~Viv~~~~~~~~~---~~~~~----~~--~~~~nvv~~~H~Y~~~~~~~~~~~~~~~ 350 (436)
+.+.+++++++++||+++ |+..|+++...+ .+. ..+++ .. ....-.|+.+|+|+.|... .+.
T Consensus 151 ~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~~-~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~---~~~--- 223 (332)
T 1hjs_A 151 ANIARLLHSAAWGIKDSSLSPKPKIMIHLDNG-WDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSS---ATL--- 223 (332)
T ss_dssp HHHHHHHHHHHHHHHTSCCSSCCEEEEEESCT-TCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTT---CCH---
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEeCCc-cchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCC---CCH---
Confidence 889999999999999999 998888874322 121 22222 11 1126789999999765321 122
Q ss_pred HHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC-------------CcCHHHHHHHHHHHHHHHccC--CCcEEEEc
Q 013777 351 IDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-------------DASKQDYQRFANAQLDVYGRA--TFGWAYWA 414 (436)
Q Consensus 351 i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~-------------~~~~~~~~~~~~~q~~~~~~~--~~Gw~~W~ 414 (436)
+.+. ..+..+.+..++||+|.|.|+.+..+ ..+.+...+|+++.+++..+. +.|-+||.
T Consensus 224 -~~l~----~~l~~~~~rygKpv~v~EtG~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~l~~~~~~~~~~~~~~G~fyWe 297 (332)
T 1hjs_A 224 -SALK----SSLDNMAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWE 297 (332)
T ss_dssp -HHHH----HHHHHHHHHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred -HHHH----HHHHHHHHHHCCCEEEEEccCccCCCCCcccccccccCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEEc
Confidence 2222 22334443446789999999876421 134567788888888887654 78999997
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-21 Score=197.17 Aligned_cols=138 Identities=25% Similarity=0.384 Sum_probs=116.3
Q ss_pred cccEEEEecCCCceEEEcCCCCCCcceEEEEEecC-CeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEEcCC
Q 013777 5 FQKYIAAESGGGTIVVANRTSASGWETFRLWRVNE-TFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDG 83 (436)
Q Consensus 5 ~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~~ 83 (436)
||||||+++|| .|+|||+.+++||||+|+++++ ++|+||+.||+||++++. +.|+|+++++++||+|+|+.++
T Consensus 269 ngkyVsa~~gg--~l~An~~~~~~~EtFql~~~~~~~~vaLRs~~GkYl~~~~~---g~v~a~~~~~g~~E~F~i~~~~- 342 (493)
T 3llp_A 269 NERNVSTRQGM--DLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTAT---GGVQSTASSKNASCYFDIEWRD- 342 (493)
T ss_dssp TSCEEECC-CC--CCEEEESCCSGGGCEEEEECTTTCCEEEECTTSCEEEECTT---SBEEEEESSCCGGGCBEEEEET-
T ss_pred CCcEEEecCCc--eEEeeCCCCCCcEEEEEEEeCCCCEEEEEeCCCCEEEEeCC---CcEEeccCCCCCcceEEEEeCC-
Confidence 99999999987 6999999999999999999985 889999999999999873 4599999999999999999885
Q ss_pred CCcceEEeccCCceEEEeeCeEEEcCCCCCCCCCCCCcccccccccc----cccchhhhhccCcChhhHHHHHhhhhc
Q 013777 84 DSSRVRLSASNGMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVST----LRGEYQITNGFGPDKAPQVLQDHWDSY 157 (436)
Q Consensus 84 ~~~~v~i~~~nG~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~----~~~e~~~~~~~G~~~a~~~~~~h~~~~ 157 (436)
++|+|++.||+||+++....+.|+... ..++..|.+..+++ +.+|| ..+|..++...|+.||+++
T Consensus 343 --g~vaLkA~NGkyVsa~~~G~L~An~~~----~g~~E~F~l~l~nrp~l~Lrg~~---G~vg~~~~~~~l~~nr~~~ 411 (493)
T 3llp_A 343 --RRITLRASNGKFVTSKKNGQLAASVET----AGDSELFLMKLINRPIIVFRGEH---GFIGCRKVTGTLDANRSSY 411 (493)
T ss_dssp --TEEEEECTTSCEEEECTTSBEEEEESS----CCGGGCBEEEECSCSEECCEETT---EEEEEC--CCBEEEEESSC
T ss_pred --CeEEEEeCCCCEEEEcCCCEEEEecCC----CCCCeEEEEEECCCceEEEeccc---CcEEeccCcchhhcccccc
Confidence 579999999999999988888888865 22356788877663 56776 4567777888899999876
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=5.9e-18 Score=170.31 Aligned_cols=232 Identities=19% Similarity=0.274 Sum_probs=157.1
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCC--CCCCCccc--hHHHHHHHHHHHHHcCCEEEEEcCC-----CCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPT--PPKPFVGG--SSKVLDNAFDWAEKYGVKVIVDLHA-----APGSQNGNEH 230 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~--~~~~~~~~--~l~~ld~~v~~a~~~Gi~VilDlH~-----~pg~qng~~~ 230 (436)
+++++.|+++|+|+|||++ | .+|. ...+|.++ .++++..++++|+++||+||||+|- .|++|+.
T Consensus 51 ~d~~~ilk~~G~N~VRlrv--w--v~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~--- 123 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRI--W--NDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKA--- 123 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEE--C--SCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCC---
T ss_pred chHHHHHHHCCCCEEEEee--e--cCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccC---
Confidence 6789999999999999998 4 2333 33456544 4899999999999999999999995 4666652
Q ss_pred CCCCCCCCCCC----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC---CChhHHHHHHHHHHHHHHhhCCCe
Q 013777 231 SATRDGFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG---VALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 231 sg~~~~~~~w~----~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~---~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
+..|. +...+.+.++-..+++++++.. .+-.+++.||+.... ...+.+.+++.+++++||+++|+.
T Consensus 124 ------P~aW~~~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~ 197 (399)
T 1ur4_A 124 ------PKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNI 197 (399)
T ss_dssp ------CGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTS
T ss_pred ------ccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCC
Confidence 22354 2334455556666666666554 345799999997521 246788999999999999999999
Q ss_pred EEEEeCCCCCC--Chhhhhcc--CCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecc
Q 013777 303 YVIMSNRLGPA--DHKELLSF--ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW 378 (436)
Q Consensus 303 ~Viv~~~~~~~--~~~~~~~~--~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEw 378 (436)
.|+++...+.. .+..+++. ..+.+-.|+.+|+|+.|.. + +..+. +.+..+.+..++||+|.|+
T Consensus 198 ~V~ih~~~~~~~~~~~~~~d~l~~~g~d~DvIG~syYp~W~~-----~----l~~l~----~~l~~l~~rygKpV~v~Et 264 (399)
T 1ur4_A 198 LVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHG-----T----LKNLT----SVLTSVADTYGKKVMVAET 264 (399)
T ss_dssp EEEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSC-----C----HHHHH----HHHHHHHHHHCCEEEEEEE
T ss_pred eEEEEeCCCcchHHHHHHHHHHHHcCCCcCeEeEecCccchh-----h----HHHHH----HHHHHHHHHhCCcEEEEEe
Confidence 88887433221 11222221 1234678999999975531 2 22222 2233343333667999999
Q ss_pred cccCCCC------------------CcCHHHHHHHHHHHHHHHccC---CCcEEEEc--eec
Q 013777 379 TCEWNVK------------------DASKQDYQRFANAQLDVYGRA---TFGWAYWA--HKC 417 (436)
Q Consensus 379 g~~~~~~------------------~~~~~~~~~~~~~q~~~~~~~---~~Gw~~W~--~k~ 417 (436)
|..+... ..+.+...+|+++.+++..+. +.|-+||. |-+
T Consensus 265 G~~~~~~~~d~~~n~~~~~~~~~~~~~s~~gQa~~l~~l~~~v~~~~~~g~GvfyWep~w~~ 326 (399)
T 1ur4_A 265 SYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIP 326 (399)
T ss_dssp CCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEECTTCCC
T ss_pred cCCccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhccCceEEEEEEccceec
Confidence 9876311 124567888999988877654 67999997 555
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.5e-15 Score=150.29 Aligned_cols=232 Identities=17% Similarity=0.209 Sum_probs=152.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+++++.|+++|+|+|||.+ | .+|.++ . ..++.+.++++.|+++||+||||+|..+-... .+.......
T Consensus 30 ~~~~~ilk~~G~n~vRlri--~--v~P~~g-~---~d~~~~~~~~~~ak~~Gl~v~ld~hysd~wad----P~~q~~p~~ 97 (334)
T 1fob_A 30 QALETILADAGINSIRQRV--W--VNPSDG-S---YDLDYNLELAKRVKAAGMSLYLDLHLSDTWAD----PSDQTTPSG 97 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE--C--SCCTTC-T---TCHHHHHHHHHHHHHTTCEEEEEECCSSSCCB----TTBCBCCTT
T ss_pred chHHHHHHHcCCCEEEEEE--E--ECCCCC-c---cCHHHHHHHHHHHHHCCCEEEEEeccCCCCCC----cccccCccc
Confidence 5789999999999999966 3 345432 1 25899999999999999999999997421100 111112234
Q ss_pred CC----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCCC-------ChhHHHHHHHHHHHHHHhhC--CCeEEE
Q 013777 240 WG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPGV-------ALDTLKSYYKAGYDAVRKYT--STAYVI 305 (436)
Q Consensus 240 w~----~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~~-------~~~~~~~~~~~~~~aIR~~~--p~~~Vi 305 (436)
|. +...+.+.++-+.+++++++.. .+..+.+.|||..... ..+.+.++..+++++||+++ |+..|+
T Consensus 98 W~~~~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~ 177 (334)
T 1fob_A 98 WSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIM 177 (334)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEE
Confidence 65 3466677777788888888754 3456889999975211 35789999999999999999 987888
Q ss_pred EeCCCCCCCh---hhhhcc--CCC-C---CcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEee
Q 013777 306 MSNRLGPADH---KELLSF--ASG-L---SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 376 (436)
Q Consensus 306 v~~~~~~~~~---~~~~~~--~~~-~---~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vG 376 (436)
++-..+ .+. ..++.. ..+ . .-.|+.+|+|+.|.. ..+++ .+.. .+..+.+..++||+|.
T Consensus 178 ~h~~~~-~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~---~~~~~----~l~~----~l~~~~~rygKpv~it 245 (334)
T 1fob_A 178 IHLDDG-WSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSA---SATLA----SLKT----SLANLQSTYDKPVVVV 245 (334)
T ss_dssp EEESCT-TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCT---TCCHH----HHHH----HHHHHHHHHCCCEEEE
T ss_pred EEcCCc-CchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCC---CCCHH----HHHH----HHHHHHHHHCCCEEEE
Confidence 773211 121 112110 011 2 568999999976532 12222 2222 2333323336679999
Q ss_pred cccccCCCCC-------------cCHHHHHHHHHHHHHHHccC--CCcEEEEce
Q 013777 377 EWTCEWNVKD-------------ASKQDYQRFANAQLDVYGRA--TFGWAYWAH 415 (436)
Q Consensus 377 Ewg~~~~~~~-------------~~~~~~~~~~~~q~~~~~~~--~~Gw~~W~~ 415 (436)
|.|..+..+. .+.+...+|+++.+++..+. ..|.+||..
T Consensus 246 EtG~~~~~d~~~~~~~~~~~~~~~s~~~Q~~~l~~~~~~v~~~~~~~G~f~We~ 299 (334)
T 1fob_A 246 ETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEP 299 (334)
T ss_dssp ECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECT
T ss_pred EcccccCCCCccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEECc
Confidence 9998764221 24566778888888777653 689999985
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=140.26 Aligned_cols=103 Identities=19% Similarity=0.235 Sum_probs=87.0
Q ss_pred ccccEEEEecCCCc----eEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEE
Q 013777 4 KFQKYIAAESGGGT----IVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIV 79 (436)
Q Consensus 4 ~~~~~~~a~~~g~~----~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~ 79 (436)
..|+||+|+.+|.- ++..||+.+++||+|+|++.++++++||+.+|+||+++.. +.|+|++++++++|+|+++
T Consensus 32 ~~~~y~~A~~~G~~t~~~~~~~~~~~~~~~E~f~l~~~~~~~v~LRs~~GkYLs~~~~---G~v~a~a~~~g~~E~F~l~ 108 (155)
T 2yug_A 32 DKGAYIHALDNGLFTLGAPHREVDEGPSPPEQFTAVKLSDSRIALKSGYGKYLGINSD---GLVVGRSDAIGPREQWEPV 108 (155)
T ss_dssp SSSCBEEECTTSCEEECCCCSSSSCCCCTTTCEEEEECSSSCEEEEETTSCBEEECSS---SBEEECCSSCCTTTBEEEE
T ss_pred CCCCEEEEEcCCcEEEccccccccCCCCCcceEEEEECCCCEEEEEeCCCCEEEecCC---CcEEeccCCCCCCCEEEEE
Confidence 45899999998821 1112378999999999999999999999999999999974 3699999999999999999
Q ss_pred EcCCCCcceEEeccCCceEEEeeCeEEEcCCCC
Q 013777 80 RKDGDSSRVRLSASNGMFIQAISETRLTADYGS 112 (436)
Q Consensus 80 ~~~~~~~~v~i~~~nG~~lq~~~~~~v~a~~~~ 112 (436)
.. ++ ++.||+.||+||.++....+.|+...
T Consensus 109 ~~-~G--~~aLra~nG~yl~~~~~g~l~a~a~~ 138 (155)
T 2yug_A 109 FQ-DG--KMALLASNSCFIRCNEAGDIEAKNKT 138 (155)
T ss_dssp CS-TT--CCEEEETTSCBEEECSSSCEEECCSC
T ss_pred EE-CC--EEEEEeCCCCEEEEcCCCcEEEecCC
Confidence 98 43 68899999999999876667777654
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=7.9e-17 Score=165.09 Aligned_cols=106 Identities=16% Similarity=0.172 Sum_probs=88.1
Q ss_pred CCcccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEE
Q 013777 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVR 80 (436)
Q Consensus 1 ~s~~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~ 80 (436)
|| .+|||||+++++|..+++||+.++.||+|+|++ ++++++||+.|++|||++++ +.|+|+++.|++||||+|++
T Consensus 224 ks-~~GkYL~~~g~~g~L~~~~~~~~g~~E~F~L~~-~~~qVaL~s~ngkyVsa~~g---g~l~An~~~~~~~EtFql~~ 298 (493)
T 3llp_A 224 RD-CEGRYLAPSGPSGTLKAGKATKVGKDELFALEQ-SCAQVVLQAANERNVSTRQG---MDLSANQDEETDQETFQLEI 298 (493)
T ss_dssp EC-TTSCBEEEETTTTEEEECC---CCGGGCEEEEE-CCCEEEEECTTSCEEECC-C---CCCEEEESCCSGGGCEEEEE
T ss_pred Ee-CCCCEEeEECCCCeEEeccCCCCCCceEEEEEe-CCCEEEEEecCCcEEEecCC---ceEEeeCCCCCCcEEEEEEE
Confidence 46 899999999977666668999999999999998 88999999999999999973 25999999999999999999
Q ss_pred cCCCCcceEEeccCCceEEEeeCeEEEcCCCC
Q 013777 81 KDGDSSRVRLSASNGMFIQAISETRLTADYGS 112 (436)
Q Consensus 81 ~~~~~~~v~i~~~nG~~lq~~~~~~v~a~~~~ 112 (436)
+.++ .+++||+.||+||.+.+...|.+....
T Consensus 299 ~~~~-~~vaLRs~~GkYl~~~~~g~v~a~~~~ 329 (493)
T 3llp_A 299 DRDT-KKCAFRTHTGKYWTLTATGGVQSTASS 329 (493)
T ss_dssp CTTT-CCEEEECTTSCEEEECTTSBEEEEESS
T ss_pred eCCC-CEEEEEeCCCCEEEEeCCCcEEeccCC
Confidence 8754 479999999999998776666655543
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.1e-15 Score=158.71 Aligned_cols=215 Identities=15% Similarity=0.135 Sum_probs=143.1
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+. .. | +. ++++++|.++||+||.|+|.... . ....
T Consensus 347 ~~d~~~~k~~G~N~vR~~-----h~-p--~~----------~~~~~~cD~~Gi~V~~e~~~~~~-----~------~~~~ 397 (613)
T 3hn3_A 347 VKDFNLLRWLGANAFRTS-----HY-P--YA----------EEVMQMCDRYGIVVIDECPGVGL-----A------LPQF 397 (613)
T ss_dssp HHHHHHHHHHTCCEEECT-----TS-C--CC----------HHHHHHHHHHTCEEEEECSCBCC-----C------SGGG
T ss_pred HHHHHHHHHcCCCEEEcc-----CC-C--Ch----------HHHHHHHHHCCCEEEEecccccc-----c------cccc
Confidence 588999999999999982 11 1 11 26789999999999999975310 0 0112
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhh
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 319 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~ 319 (436)
|.+...+.+.+.++.+++|++++|+|+.|.+.|||.. ..+....+++++++.||+.||+++|+..... ++..
T Consensus 398 ~~~~~~~~~~~~~~~~v~r~~nhPSIi~W~~~NE~~~---~~~~~~~~~~~l~~~~k~~DptRpv~~~~~~---~~~~-- 469 (613)
T 3hn3_A 398 FNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPAS---HLESAGYYLKMVIAHTKSLDPSRPVTFVSNS---NYAA-- 469 (613)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCT---TSHHHHHHHHHHHHHHHHHCTTSCEEEEECS---CTTT--
T ss_pred cChHHHHHHHHHHHHHHHHhCCCCeEEEEecccCccc---ccchHHHHHHHHHHHHHHhCCCCCEEEEccc---Cccc--
Confidence 3356677888999999999999999999999999974 2345788999999999999999999884211 1111
Q ss_pred ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC-------CcCHHHH
Q 013777 320 SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-------DASKQDY 392 (436)
Q Consensus 320 ~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~-------~~~~~~~ 392 (436)
........|+++|.|..|.... ...+..... ....+..+.+..++|+|++|||+..... .-+.+..
T Consensus 470 -~~~~~~~Dv~~~n~Y~~wy~~~--~~~~~~~~~----l~~~~~~~~~~~~kPi~isE~G~~~~~g~~~~~~~~~seeyQ 542 (613)
T 3hn3_A 470 -DKGAPYVDVICLNSYYSWYHDY--GHLELIQLQ----LATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQ 542 (613)
T ss_dssp -CSSGGGCSSEEEECCBTTTBST--TCGGGHHHH----HHHHHHHHHHHHCSCEEEEECCCCBCTTCCCSSCCTBSHHHH
T ss_pred -cccccccceeEEeccccccCCC--ccHHHHHHH----HHHHHHHHHHhcCCCEEEEeeCCCCCCCcccCCCCCCCHHHH
Confidence 0011223578999997643211 111211112 2222233322225569999999853211 1134555
Q ss_pred HHHHHHHHHHHcc----CCCcEEEEceecC
Q 013777 393 QRFANAQLDVYGR----ATFGWAYWAHKCE 418 (436)
Q Consensus 393 ~~~~~~q~~~~~~----~~~Gw~~W~~k~~ 418 (436)
..|++.++.++.+ .-+|++.|++..-
T Consensus 543 ~~~~~~~~~~~~~~~~~~~~G~~~W~~~Df 572 (613)
T 3hn3_A 543 KSLLEQYHLGLDQKRRKYVVGELIWNFADF 572 (613)
T ss_dssp HHHHHHHHHHHHTTTTTTEEEEEESCSBCB
T ss_pred HHHHHHHHHHHHhhcccceEEEEEEEeeec
Confidence 6788888887764 4679999999874
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=5.1e-15 Score=151.72 Aligned_cols=141 Identities=15% Similarity=0.198 Sum_probs=103.9
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..+ ++|++.|+++|+|++|++|.|-.+ .|..++.+++..++.+|++|+.|.++||.+||+||+..--+.-
T Consensus 78 D~Y~~~--~eDi~lm~~~G~~~~R~si~W~Ri-~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l---- 150 (468)
T 2j78_A 78 DHYNRW--KEDIEIIEKLGVKAYRFSISWPRI-LPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFAL---- 150 (468)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH----
T ss_pred cccccC--HHHHHHHHHcCCCEEEeccCHHHh-CCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEEccCCCCchhh----
Confidence 566655 899999999999999999988654 4543456778899999999999999999999999764211100
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC-h-h------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA-L-D------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~-~-~------~~~~~~~~ 290 (436)
.....|. +...+.+.++++.+++||++ .|..|.++|||.. |+.. . . .+......
T Consensus 151 ---~~~ggw~~~~~~~~F~~ya~~~~~~~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~ 225 (468)
T 2j78_A 151 ---QLKGGWANREIADWFAEYSRVLFENFGD--RVKNWITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHAR 225 (468)
T ss_dssp ---HTTTGGGSTTHHHHHHHHHHHHHHHHTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---hhcCCCCChHHHHHHHHHHHHHHHHhCC--ccceEEEccccchhhccccccccCCCCcccHHHHHHHHHHHHHHHHH
Confidence 0001354 67899999999999999998 5667999999973 1111 1 1 12223467
Q ss_pred HHHHHHhhCCCeEE
Q 013777 291 GYDAVRKYTSTAYV 304 (436)
Q Consensus 291 ~~~aIR~~~p~~~V 304 (436)
+++++|+.+|+..|
T Consensus 226 Av~~~r~~~~~~~I 239 (468)
T 2j78_A 226 AVKVFRETVKDGKI 239 (468)
T ss_dssp HHHHHHHHCTTCEE
T ss_pred HHHHHHhhCCCCeE
Confidence 78899999887543
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.59 E-value=4.7e-15 Score=150.46 Aligned_cols=261 Identities=15% Similarity=0.197 Sum_probs=156.2
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..+ ++|++.|+++|+|++|+++.|-.+ .|.+ +.++...++.+|++|+.|.++||.+||+||+..-.+. ..
T Consensus 47 d~Y~~~--~eDi~lm~~~G~~~~R~si~W~ri-~P~~-g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~---l~ 119 (423)
T 1vff_A 47 NHWELY--RDDIQLMTSLGYNAYRFSIEWSRL-FPEE-NKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLW---FM 119 (423)
T ss_dssp CHHHHH--HHHHHHHHHHTCCEEEEECCHHHH-CSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---HH
T ss_pred cchhcc--HHHHHHHHHcCCCEEEeecCHHHh-CCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEccCCcccHH---HH
Confidence 566666 899999999999999999988654 4554 6778889999999999999999999999996421100 00
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC-h-h------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA-L-D------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~-~-~------~~~~~~~~ 290 (436)
....|. +..++.+.++++.+++||++ |..|+++|||.. ++.. . . .+......
T Consensus 120 ----~~ggw~~~~~~~~f~~ya~~~~~r~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~ll~Aha~ 192 (423)
T 1vff_A 120 ----KKGGFLREENLKHWEKYIEKVAELLEK---VKLVATFNEPMVYVMMGYLTAYWPPFIRSPFKAFKVAANLLKAHAI 192 (423)
T ss_dssp ----HTTGGGSGGGHHHHHHHHHHHHHHTTT---CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ----hcCCCCCHHHHHHHHHHHHHHHHHhCC---CceEEEecCcchhhhccccccccCCCccchHHHHHHHHHHHHHHHH
Confidence 001254 67899999999999999998 778999999973 1111 1 1 12223356
Q ss_pred HHHHHHhhCCCeEEEEeCCC-C--CCChh---------h-----hhcc------C--------CCCCcEEEEEeecCcCC
Q 013777 291 GYDAVRKYTSTAYVIMSNRL-G--PADHK---------E-----LLSF------A--------SGLSRVVIDVHYYNLFS 339 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv~~~~-~--~~~~~---------~-----~~~~------~--------~~~~nvv~~~H~Y~~~~ 339 (436)
+++++|+ +...-+++...+ . +.++. . +++. + ....-..+.+|+|....
T Consensus 193 Av~~~r~-~~~iG~~~~~~~~~P~~~~~~d~~aa~~~~~~~~~~f~d~~~~G~yp~~~~~~~~i~~~~DfiGinyY~~~~ 271 (423)
T 1vff_A 193 AYELLHG-KFKVGIVKNIPIILPASDKERDRKAAEKADNLFNWHFLDAIWSGKYRGVFKTYRIPQSDADFIGVNYYTASE 271 (423)
T ss_dssp HHHHHTT-TSEEEEEEECCEEEESSSSHHHHHHHHHHHHHHTHHHHHHHHHCEEECSSCEEECCCCCCSCEEEECCCEEE
T ss_pred HHHHHHh-cCceEEEEeCCceecCCCCHHHHHHHHHHHHHHHHHHhhHhhccccchhcCccHhhcCCCCEEEEcccccee
Confidence 6778888 544444444321 0 11110 1 1111 0 02334678888886421
Q ss_pred CC----------------C--CCCChhhhH--HHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHH
Q 013777 340 NN----------------F--NGLNVQQNI--DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQ 399 (436)
Q Consensus 340 ~~----------------~--~~~~~~~~i--~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q 399 (436)
-. . ......+.+ .-++. .+..+.+.+. |++|+|.|.....+....+.+++++++.
T Consensus 272 v~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~gl~~----~L~~~~rY~~-Pi~ITENG~~~~dD~~Ri~yl~~hl~~~ 346 (423)
T 1vff_A 272 VRHTWNPLKFFFEVKLADISERKTQMGWSVYPKGIYM----ALKKASRYGR-PLYITENGIATLDDEWRVEFIIQHLQYV 346 (423)
T ss_dssp EEECSCGGGTTEEEEECCCSSSCCTTCCCCCTHHHHH----HHHHHGGGCS-CEEEEECCCCCSCHHHHHHHHHHHHHHH
T ss_pred eeccCCCCCccccccCCCCCCCCCCCCCccCHHHHHH----HHHHHHHcCC-CEEEEeCCCCCCccHHHHHHHHHHHHHH
Confidence 00 0 000000110 11211 2223333444 6999999986432111223345566666
Q ss_pred HHHHcc--CCCcEEEEceecCCCCCChHHHHhCCCc
Q 013777 400 LDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGYI 433 (436)
Q Consensus 400 ~~~~~~--~~~Gw~~W~~k~~~~~Ws~~~~~~~g~~ 433 (436)
.++.+. .-.|++.|++-.. -.|......+.|++
T Consensus 347 ~~Ai~dGv~v~GY~~Wsl~Dn-~eW~~gy~~RfGl~ 381 (423)
T 1vff_A 347 HKAIEDGLDVRGYFYWSFMDN-YEWKEGFGPRFGLV 381 (423)
T ss_dssp HHHHHTTCCEEEEEEECSBCC-CCGGGTTCCCCCSE
T ss_pred HHHHHcCCCEEEEEecCCCcc-cccccCCCCCCcEE
Confidence 666654 3479999998763 34665444455554
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=6.7e-14 Score=150.17 Aligned_cols=120 Identities=23% Similarity=0.310 Sum_probs=86.9
Q ss_pred hhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcC-CCCCC-------
Q 013777 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH-AAPGS------- 224 (436)
Q Consensus 153 h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH-~~pg~------- 224 (436)
||+....++||+.|+++|+|+||+++..|...+|.+ +.| .++.||++++.|+++||+||++++ ..+..
T Consensus 10 ~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~-g~~---d~~~ld~~ld~a~~~Gi~vil~~~~~~~P~Wl~~~~P 85 (645)
T 1kwg_A 10 HWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEP-GRL---EWGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRYP 85 (645)
T ss_dssp GSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBT-TBC---CCHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHHCG
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeeechhhcCCCC-Ccc---ChHHHHHHHHHHHHCCCEEEEeCCCCCCChhHhhcCC
Confidence 455555699999999999999999974455666654 345 357899999999999999999994 32210
Q ss_pred ------CCCCCC-CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 225 ------QNGNEH-SATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 225 ------qng~~~-sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
.+|... .|.+.......+...+.+.++++.|++||+++|.|++|++.|||..
T Consensus 86 ~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~V~~w~i~NE~~~ 144 (645)
T 1kwg_A 86 EILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGC 144 (645)
T ss_dssp GGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTT
T ss_pred ceeeeCCCCcCcccCccccCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcCCC
Confidence 011000 0111111111267788899999999999999999999999999975
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2.5e-13 Score=144.48 Aligned_cols=225 Identities=19% Similarity=0.191 Sum_probs=145.1
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCC---CCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN---GNEHSATRDG 236 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qn---g~~~sg~~~~ 236 (436)
++|++.||++|+|+||+.- . | + -++++++|.++||+||.+++.....+. ++.. +.. .
T Consensus 314 ~~di~l~k~~g~N~vR~~h-----y-p--~----------~~~~~~lcD~~Gi~V~~E~~~~g~~~~~~~~~~~-~~~-~ 373 (605)
T 3lpf_A 314 VHDHALMDWIGANSYRTSH-----Y-P--Y----------AEEMLDWADEHGIVVIDETAAVGFNLSLGIGFEA-GNK-P 373 (605)
T ss_dssp HHHHHHHHHHTCCEEEECS-----S-C--C----------CHHHHHHHHHHTCEEEEECSCBCCCSSCCCSCCC-CCC-C
T ss_pred HHHHHHHHHCCCcEEEecC-----C-C--C----------cHHHHHHHHhcCCEEEEecccccccccccccccc-ccC-c
Confidence 6889999999999999831 1 1 1 146889999999999999976421110 1111 100 0
Q ss_pred CCCCC-----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCC-
Q 013777 237 FQEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL- 310 (436)
Q Consensus 237 ~~~w~-----~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~- 310 (436)
...|. +...+...+.++.+.+|++++|+|++|.+.|||.. .......+++++++.||+.||+++|......
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~NHPSIi~Ws~gNE~~~---~~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~ 450 (605)
T 3lpf_A 374 KELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDT---RPQGAREYFAPLAEATRKLDPTRPITCVNVMF 450 (605)
T ss_dssp SCSSSTTTSCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCC---CSTTHHHHHHHHHHHHHHHCSSSCEEEEEETT
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHcCCCCeEEEEecCccccc---ccchHHHHHHHHHHHHHHHCCCCcEEEecccc
Confidence 01121 45677788999999999999999999999999974 2344568999999999999999999876321
Q ss_pred CCCChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCC------
Q 013777 311 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV------ 384 (436)
Q Consensus 311 ~~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~------ 384 (436)
.......+. ..-.|+++|.|..|... ....+. +.......+..+.+...+|++++|||+....
T Consensus 451 ~~~~~d~~~-----~~~Dvig~N~Y~gwY~~--~g~~~~----~~~~l~~~~~~w~~~~~KPiiisEyGa~~~~g~h~~~ 519 (605)
T 3lpf_A 451 CDAHTDTIS-----DLFDVLCLNRYYGWYVQ--SGDLET----AEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMY 519 (605)
T ss_dssp SCTTTCSSG-----GGSSSEEEECCBTTTBS--TTCHHH----HHHHHHHHHHHHHHHHCCCEEEEECCCCCCTTCCCSS
T ss_pred Ccccccccc-----cccceeeeccccccccC--CCchHH----HHHHHHHHHHHHhhccCCCeEEEeeCCCCCcCcccCC
Confidence 110001111 12346788888654211 112222 2222222222333333456999999964221
Q ss_pred -CCcCHHHHHHHHHHHHHHHcc--CCCcEEEEceecC
Q 013777 385 -KDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCE 418 (436)
Q Consensus 385 -~~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~ 418 (436)
..-+.+....|++.+++++.+ .-+|++.|.+..-
T Consensus 520 ~~~~sEeyq~~~~~~~~~~~~~~~~~~G~~iW~~~Df 556 (605)
T 3lpf_A 520 TDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADF 556 (605)
T ss_dssp CCTTSHHHHHHHHHHHHHHHTTCTTEEEEEEEEEECB
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEeeee
Confidence 112456667888999999987 4589999999874
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.4e-13 Score=139.88 Aligned_cols=140 Identities=21% Similarity=0.284 Sum_probs=103.6
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..+ ++|++.|+++|+|++|+++.|..+ .|.+.+++++..++.+|++|+.|.++||.+||+||+..--+. .
T Consensus 54 D~Y~~~--~eDi~lm~~~G~~~~R~si~W~Ri-~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~H~d~P~~---l- 126 (431)
T 1ug6_A 54 DHYRRY--EEDIALMQSLGVRAYRFSVAWPRI-LPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA---L- 126 (431)
T ss_dssp CHHHHH--HHHHHHHHHHTCCEEEEECCHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---H-
T ss_pred cchhhh--HHHHHHHHHcCCCEEEcccCHHHc-ccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCcc---h-
Confidence 566666 899999999999999999988654 455435677889999999999999999999999997421110 0
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC-hh-------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA-LD-------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~-~~-------~~~~~~~~ 290 (436)
.....|. +...+.+.++++.+++||++. |..|.++|||.. |+.. .. .+.....+
T Consensus 127 ---~~~ggw~~~~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~ 201 (431)
T 1ug6_A 127 ---EERGGWRSRETAFAFAEYAEAVARALADR--VPFFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGL 201 (431)
T ss_dssp ---HTTTGGGSHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---hhcCCCCChHHHHHHHHHHHHHHHHhcCC--CceEEEecCcchhhccccccccCCCCccchHHHHHHHHHHHHHHHH
Confidence 0012354 678999999999999999985 667999999974 1111 11 12223467
Q ss_pred HHHHHHhhCCCeEE
Q 013777 291 GYDAVRKYTSTAYV 304 (436)
Q Consensus 291 ~~~aIR~~~p~~~V 304 (436)
+++++|+ +|+..|
T Consensus 202 Av~~~r~-~~~~~i 214 (431)
T 1ug6_A 202 AVEALRA-AGARRV 214 (431)
T ss_dssp HHHHHHH-TTCSEE
T ss_pred HHHHHHh-cCCCeE
Confidence 8889999 887543
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.1e-13 Score=142.05 Aligned_cols=256 Identities=13% Similarity=0.126 Sum_probs=144.0
Q ss_pred hhHHHHHhhhhcCCHHHHHHHH-hCCCCEEEecCcccccc---CCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 146 APQVLQDHWDSYITDEDFKFLS-SNGINAVRIPVGWWIAN---DPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 146 a~~~~~~h~~~~ite~d~~~ia-~~G~N~VRipv~~~~~~---~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+...++.++ +++++.|+ ++|+++||+++.|.... ...+ ++. ..-.+..+|+++++|+++||+++|.|
T Consensus 27 ~~~~~r~~~-----~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~-~~~n~~~~D~~~~~~~~~Gi~p~v~l 100 (503)
T 1w91_A 27 LGLALQKEY-----LDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMK-PFYNFTYIDRIVDSYLALNIRPFIEF 100 (503)
T ss_dssp GGGGGBHHH-----HHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEE-EEECCHHHHHHHHHHHHTTCEEEEEE
T ss_pred chhhhCHHH-----HHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCc-eeeccHHHHHHHHHHHHCCCEEEEEE
Confidence 444555666 68999997 89999999998765211 1111 110 01137899999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-----hhHHHHHHHHHHHHH----HHhCCCCcee--EEEeecCCCCCC----CChhH
Q 013777 219 HAAPGSQNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLA----ARYANRPSLA--AIELINEPLAPG----VALDT 283 (436)
Q Consensus 219 H~~pg~qng~~~sg~~~~~~~w~-----~~~~~~~~~~~~~lA----~ry~~~~~v~--g~eL~NEP~~~~----~~~~~ 283 (436)
+..|.... ++.. ....|. +...+.+.++++.++ +||++. .|- -|++.|||.... .+.+.
T Consensus 101 ~~~P~~~~----~~~~-~~~~w~~~~~~p~~~~~~~~~v~~~~~~~~~ryg~~-~V~~W~wev~NEp~~~~~~~~~~~~~ 174 (503)
T 1w91_A 101 GFMPKALA----SGDQ-TVFYWKGNVTPPKDYNKWRDLIVAVVSHFIERYGIE-EVRTWLFEVWNEPNLVNFWKDANKQE 174 (503)
T ss_dssp CSBCGGGB----SSCC-EETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHH-HHHTSEEEECSCTTSTTTSGGGCHHH
T ss_pred cCCcHHHh----CCCC-ceeecCCCCCCccCHHHHHHHHHHHHHHHHhhcCch-hhceeeEEEeeCCCCccCCCCCCHHH
Confidence 98765321 1100 001121 345666665555555 566532 254 589999998631 25667
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEEeCCCC-CCCh-hhhhccC--CCCCcEEEEEeecCcCCCC-------CCC-CChhhhH
Q 013777 284 LKSYYKAGYDAVRKYTSTAYVIMSNRLG-PADH-KELLSFA--SGLSRVVIDVHYYNLFSNN-------FNG-LNVQQNI 351 (436)
Q Consensus 284 ~~~~~~~~~~aIR~~~p~~~Viv~~~~~-~~~~-~~~~~~~--~~~~nvv~~~H~Y~~~~~~-------~~~-~~~~~~i 351 (436)
+.+++++++++||+.+|+..|....... ...+ ..++... .+..-.++++|.|...... ... ..++...
T Consensus 175 y~~~~~~~~~~ik~~~P~~~vggp~~~~~~~~w~~~~l~~~~~~g~~~D~is~H~Y~~~~~~~~~~~~~~~~~~~~~~~~ 254 (503)
T 1w91_A 175 YFKLYEVTARAVKSVDPHLQVGGPAICGGSDEWITDFLHFCAERRVPVDFVSRHAYTSKAPHKKTFEYYYQELEPPEDML 254 (503)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEECSSCTHHHHHHHHHHHHTTCCCCEEEEEEECBCSCSEECSSCEECCBCCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEeeeccCCchHHHHHHHHHHHhCCCCCCEEEEeecCCCccccccccccccccCCHHHHH
Confidence 8899999999999999998774322111 0111 2333321 2334578999999753210 000 1122222
Q ss_pred HHHHHhhhhhHHHhhhc--CCCeEEeecccccCCCCCc--CHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 352 DYVNNQRASDLGAVTTS--NGPLTFVGEWTCEWNVKDA--SKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 352 ~~i~~~~~~~~~~~~~~--~~p~v~vGEwg~~~~~~~~--~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
+.+... .+ .+.+. .+.|++|+|||........ +......|+...+......--+..||++-.
T Consensus 255 ~~i~~~-~~---~~~~~~~~~~pi~itE~g~~~~~~~~~~d~~~~A~~~~~~l~~~~~~v~~~~~w~~~D 320 (503)
T 1w91_A 255 EQFKTV-RA---LIRQSPFPHLPLHITEYNTSYSPINPVHDTALNAAYIARILSEGGDYVDSFSYWTFSD 320 (503)
T ss_dssp HHHHHH-HH---HHHTSSSTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred HHHHHH-HH---HHHhcCCCCCcEEEeccCCCCCCCCCcccHHHhHHHHHHHHHHHhhhhheEEEEEEec
Confidence 222111 11 12222 2456999999986532111 112224455443322222234678999865
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=99.50 E-value=3e-13 Score=138.05 Aligned_cols=141 Identities=18% Similarity=0.267 Sum_probs=104.7
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|++|+.+.|-.+ .|..++.+++..++.+|++|+.|.++||.+||+||+..--+. -
T Consensus 56 d~Y~~~--~eDi~lm~~~G~~~~R~si~Wsri-~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~h~d~P~~---l- 128 (453)
T 3ahx_A 56 DHYHRY--KEDVQLLKSLGIKSYRFSIAWPRI-FPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQK---L- 128 (453)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHH-CTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---H-
T ss_pred cHHHHH--HHHHHHHHHhCCCeEecccCHHHh-ccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCccHh---H-
Confidence 566666 899999999999999999987644 555345677889999999999999999999999986422110 0
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC-hh-------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA-LD-------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~-~~-------~~~~~~~~ 290 (436)
.....|. +...+.+.++.+.+++||++. |..|.++|||.. |+.. .. .+......
T Consensus 129 ---~~~ggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~ 203 (453)
T 3ahx_A 129 ---QDIGGWANPQVADYYVDYANLLFREFGDR--VKTWITHNEPWVASYLGYALGVHAPGIKDMKMALLAAHNILLSHFK 203 (453)
T ss_dssp ---HTTTGGGSHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---hhCCCCCCchHHHHHHHHHHHHHHHhCCc--cceEEEccCcchhhccccccCcCCCCcccHHHHHHHHHHHHHHHHH
Confidence 0012354 678899999999999999987 777999999974 1111 11 12223457
Q ss_pred HHHHHHhhCCCeEE
Q 013777 291 GYDAVRKYTSTAYV 304 (436)
Q Consensus 291 ~~~aIR~~~p~~~V 304 (436)
+++++|+.+|+..|
T Consensus 204 Av~~~r~~~~~~~I 217 (453)
T 3ahx_A 204 AVKAYRELEQDGQI 217 (453)
T ss_dssp HHHHHHHTCCSCEE
T ss_pred HHHHHHhhCCCCeE
Confidence 78899999887544
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=9.8e-13 Score=134.16 Aligned_cols=143 Identities=17% Similarity=0.284 Sum_probs=106.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|++|+.+.|-.+ .|..++.+++..++.+|++|+.|.++||.+||+||+..--+.
T Consensus 55 d~Yh~y--~eDi~lm~~~G~~~~R~si~W~Ri-~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~----- 126 (447)
T 1e4i_A 55 DSYHRY--EEDIRLMKELGIRTYRFSVSWPRI-FPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA----- 126 (447)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chhhcc--HHHHHHHHHcCCCeEEecCcHHHh-ccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccHH-----
Confidence 566666 899999999999999999987644 455345778889999999999999999999999986422110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC-h-------hHHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA-L-------DTLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~-~-------~~~~~~~~~ 290 (436)
......|. +...+.+.++++.+++||++. |..|.++|||.. |+.. . ..+......
T Consensus 127 --l~~~ggw~~r~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~ 202 (447)
T 1e4i_A 127 --LQDAGGWGNRRTIQAFVQFAETMFREFHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGL 202 (447)
T ss_dssp --HHHTTTTSSTHHHHHHHHHHHHHHHHTBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --HHhcCCCCCchhHHHHHHHHHHHHHHhCCc--ceeEEEecCccccccccccccccCCCccchHHHHHHHHHHHHHHHH
Confidence 00012354 678999999999999999986 777999999973 1111 1 112233467
Q ss_pred HHHHHHhhCCCeEEEE
Q 013777 291 GYDAVRKYTSTAYVIM 306 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv 306 (436)
+++++|+..|+..|-+
T Consensus 203 Av~~~r~~~~~~~IGi 218 (447)
T 1e4i_A 203 SVRRFRELGTSGQIGI 218 (447)
T ss_dssp HHHHHHHHTCSSEEEE
T ss_pred HHHHHHHhCCCCeEEE
Confidence 7889999988765543
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.8e-13 Score=141.07 Aligned_cols=256 Identities=13% Similarity=0.138 Sum_probs=143.5
Q ss_pred hhHHHHHhhhhcCCHHHHHHHH-hCCCCEEEecCccccccC---CCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 146 APQVLQDHWDSYITDEDFKFLS-SNGINAVRIPVGWWIAND---PTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 146 a~~~~~~h~~~~ite~d~~~ia-~~G~N~VRipv~~~~~~~---~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+...++.++ ++|++.|+ ++||++||+++.|..... ..+ ++. ..-.+..+|+++++|+++||+++|.|
T Consensus 27 ~~~~~~~~~-----~e~l~~~~~~~G~~~vR~~~~w~~~~~~~~~~~~~~~g~-~~~~~~~~D~~~~~~~~~Gi~p~v~l 100 (500)
T 1uhv_A 27 LGLALQKEY-----IETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVK-PFYNFTYIDRIFDSFLEIGIRPFVEI 100 (500)
T ss_dssp GGGGGBHHH-----HHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEE-EEECCHHHHHHHHHHHHHTCEECEEE
T ss_pred chhhhCHHH-----HHHHHHHHHhcCceEEEEecCcCCCceeeecccccCCCc-eEEehhHHHHHHHHHHHCCCEEEEEE
Confidence 334455555 79999998 999999999997752110 001 110 01137899999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCC----CC-hhHHHHHHHHHHHHHH----HhCCCCcee--EEEeecCCCCCC----CChhH
Q 013777 219 HAAPGSQNGNEHSATRDGFQE----WG-DSNVADTVAVIDFLAA----RYANRPSLA--AIELINEPLAPG----VALDT 283 (436)
Q Consensus 219 H~~pg~qng~~~sg~~~~~~~----w~-~~~~~~~~~~~~~lA~----ry~~~~~v~--g~eL~NEP~~~~----~~~~~ 283 (436)
+..|..... +.. .... +. +...+.+.++++.+++ ||++. .|- -|++.|||.... .+.+.
T Consensus 101 ~~~P~~~~~----~~~-~~~~~~~~~~~p~~~~~w~~~~~~~~~~~~~ryg~~-~V~~W~~~~~NEpn~~~~~~~~~~~~ 174 (500)
T 1uhv_A 101 GFMPKKLAS----GTQ-TVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIE-EVLKWPFEIWNEPNLKEFWKDADEKE 174 (500)
T ss_dssp CCCCTTTBS----SCC-EETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHH-HHTTCCEEESSCTTSTTTSGGGCHHH
T ss_pred ccChHHHhC----CCC-ceeecCCCCCCCcCHHHHHHHHHHHHHHHHHhcCcc-ceeeeeEEEeeCCCCcccCCCCCHHH
Confidence 987763211 100 0011 11 3445666666665554 55432 243 479999998521 25566
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEEeCCCC-CCCh-hhhhccC--CCCCcEEEEEeecCcCCCCCC----C---CChhhhHH
Q 013777 284 LKSYYKAGYDAVRKYTSTAYVIMSNRLG-PADH-KELLSFA--SGLSRVVIDVHYYNLFSNNFN----G---LNVQQNID 352 (436)
Q Consensus 284 ~~~~~~~~~~aIR~~~p~~~Viv~~~~~-~~~~-~~~~~~~--~~~~nvv~~~H~Y~~~~~~~~----~---~~~~~~i~ 352 (436)
+.+++.+++++||+++|+..|......+ ...+ ..++... .+..-.++++|.|........ . ...+...+
T Consensus 175 y~~~~~~~~~~ik~~~P~~~vggp~~~~~~~~w~~~~l~~~~~~~~~~D~is~H~Y~~~~~~~~~~~~~~~~~~~~~~~~ 254 (500)
T 1uhv_A 175 YFKLYKVTAKAIKEVNENLKVGGPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSKQGEYTPHLIYQEIMPSEYMLN 254 (500)
T ss_dssp HHHHHHHHHHHHHHHCTTSCEEEEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBCCCCCCSSCCCCCBCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEECcccCCCchHHHHHHHHHHHhCCCCCcEEEEeecCCCcccccccccccccCCHHHHHH
Confidence 8888999999999999997763321111 1111 2333221 123456999999976431000 0 12222222
Q ss_pred HHHHhhhhhHHHhhhc--CCCeEEeecccccCCCCC--cCHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 353 YVNNQRASDLGAVTTS--NGPLTFVGEWTCEWNVKD--ASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 353 ~i~~~~~~~~~~~~~~--~~p~v~vGEwg~~~~~~~--~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
.+...+ ..+.+. .+.|++|+|||....... ........|+...+......--+.+||++..
T Consensus 255 ~i~~~~----~~l~~~~~~~~pi~iTE~g~~~~~~~~~~d~~~~a~~l~~~l~~~~~~v~~~~~W~l~D 319 (500)
T 1uhv_A 255 EFKTVR----EIIKNSHFPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSD 319 (500)
T ss_dssp HHHHHH----HHHHTSSCTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred HHHHHH----HHHHhcCCCCCcEEEecCcccCCCCCCcCcHHHHHHHHHHHHHHHHhhhhheeeeEEec
Confidence 222111 112222 245699999998653211 1112224454333322222344788999864
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.46 E-value=1e-12 Score=134.10 Aligned_cols=143 Identities=15% Similarity=0.214 Sum_probs=106.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|++|+.+.|..+ .|..++.++...++.+|++|+.|.++||.+||+||+..--+. -
T Consensus 55 d~Y~~~--~eDi~lm~~~G~~~~R~si~W~ri-~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~h~d~P~~---l- 127 (449)
T 1qox_A 55 DSYHRV--EEDVQLLKDLGVKVYRFSISWPRV-LPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQA---L- 127 (449)
T ss_dssp CTTSCH--HHHHHHHHHHTCSEEEEECCHHHH-STTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---H-
T ss_pred chhhhh--HHHHHHHHhcCCCeEEecCcHHHh-CcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeCCCcccHH---H-
Confidence 677766 899999999999999999987654 455345777889999999999999999999999986422110 0
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC-hh-------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA-LD-------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~-~~-------~~~~~~~~ 290 (436)
.....|. +...+.+.++.+.+++||++. |..|.++|||.. |+.. .. .+......
T Consensus 128 ---~~~ggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~ 202 (449)
T 1qox_A 128 ---QDQGGWGSRITIDAFAEYAELMFKELGGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGR 202 (449)
T ss_dssp ---HTTTGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---HhcCCCCCchHHHHHHHHHHHHHHHhCCC--CceEEEccCCcceeccccccCccCCCcccHHHHHHHHHHHHHHHHH
Confidence 0001344 678999999999999999987 777999999973 1111 11 12223467
Q ss_pred HHHHHHhhCCCeEEEE
Q 013777 291 GYDAVRKYTSTAYVIM 306 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv 306 (436)
+++++|+..|+..|-+
T Consensus 203 Av~~~r~~~~~~~IGi 218 (449)
T 1qox_A 203 AVTLFRELGISGEIGI 218 (449)
T ss_dssp HHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhCCCceEEE
Confidence 7889999988765544
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=6.5e-12 Score=131.04 Aligned_cols=221 Identities=15% Similarity=0.148 Sum_probs=131.4
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++|++.||++|+|+||+ | ..+|... . |++++.|.++|||||+++|....+.. + ..+.
T Consensus 90 ~rDi~LmK~~GiN~VRv----y-~~~P~~~------~----d~~ldl~~~~GIyVIle~~~p~~~i~-------~-~~P~ 146 (555)
T 2w61_A 90 LRDIPFLKMLGVNTLRV----Y-AIDPTKS------H----DICMEALSAEGMYVLLDLSEPDISIN-------R-ENPS 146 (555)
T ss_dssp HHHHHHHHHHTCSEEEE----C-CCCTTSC------C----HHHHHHHHHTTCEEEEESCBTTBSCC-------T-TSCC
T ss_pred HHHHHHHHHcCCCEEEE----e-ccCCCCC------h----HHHHHHHHhcCCEEEEeCCCCCcccc-------c-CCHH
Confidence 78999999999999999 3 2333221 1 78888999999999999986422111 1 1233
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC---hhHHHHHHHHHHHHHHhhCCCeEEEEe-CCCCCCCh
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA---LDTLKSYYKAGYDAVRKYTSTAYVIMS-NRLGPADH 315 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~---~~~~~~~~~~~~~aIR~~~p~~~Viv~-~~~~~~~~ 315 (436)
| .+.+++..+.+++||+++|+|++|.+.||+...... ...++...+++.+.||+.++.. |.|+ ........
T Consensus 147 ~----~~~~~~r~~~~V~ry~nhP~Vi~W~vGNE~~~~~~~~~~~~y~~aa~r~~~~~lk~~d~R~-IpVgy~~ad~~~~ 221 (555)
T 2w61_A 147 W----DVHIFERYKSVIDAMSSFPNLLGYFAGNQVTNDHTNTFASPFVKAAIRDAKEYISHSNHRK-IPVGYSTNDDAMT 221 (555)
T ss_dssp C----CHHHHHHHHHHHHHHTTCTTEEEEEEEESSSCSTTCGGGHHHHHHHHHHHHHHHHHSSSCC-CCEEEEECCCTTT
T ss_pred H----HHHHHHHHHHHHHHcCCCCcEEEEEeCccccCCCccchhhHHHHHHHHHHHHHHHhcCCCc-ceeeccccccchh
Confidence 4 345677889999999999999999999999853211 2346667777888888888654 4343 11111111
Q ss_pred -hhhhccCC--CCCcEEEEEeecCcCCCCCCCCChh-hhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHH
Q 013777 316 -KELLSFAS--GLSRVVIDVHYYNLFSNNFNGLNVQ-QNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 391 (436)
Q Consensus 316 -~~~~~~~~--~~~nvv~~~H~Y~~~~~~~~~~~~~-~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~ 391 (436)
..+..+.. .....++++|.|..+.. .+.+ .....+. ..+... ..|+|++|+|+.....+.-.+.
T Consensus 222 r~~la~yl~c~~~~~D~~~~N~Y~w~g~----s~f~~sg~~~~~-------~~~~~~-~~Pi~vsEyG~~~~~pg~~~E~ 289 (555)
T 2w61_A 222 RDNLARYFVCGDVKADFYGINMYEWCGY----STYGTSGYRERT-------KEFEGY-PIPVFFSEFGCNLVRPRPFTEV 289 (555)
T ss_dssp HHHHHHHTTBTTCCCSCEEEEECCCCSS----CCHHHHSHHHHH-------HHHTTC-SSCEEEEEECCCSSSSCCCTHH
T ss_pred hHHHHHHhccCCCCcCEEEEeCCccccc----ccccchhHHHHH-------HHhhCC-CCCEEEEeCCCccCCCCchHHH
Confidence 11222211 23456889999964321 1111 0011111 111222 4569999999876433333333
Q ss_pred HHHHHHHHHHHHccCCCcEEEEceecCCCCCCh
Q 013777 392 YQRFANAQLDVYGRATFGWAYWAHKCEANHWSL 424 (436)
Q Consensus 392 ~~~~~~~q~~~~~~~~~Gw~~W~~k~~~~~Ws~ 424 (436)
...|-+...++ -.|-+.|.|-.+...|.+
T Consensus 290 ~a~y~~~m~~~----~sGG~Ife~~dE~nnyGL 318 (555)
T 2w61_A 290 SALYGNKMSSV----WSGGLAYMYFEEENEYGV 318 (555)
T ss_dssp HHHTSHHHHTT----CCEEEESCSBCCTTCCCS
T ss_pred HHHHhhccccc----ccceEEEEEecccCCccc
Confidence 33332221222 336689999887555543
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.42 E-value=1e-11 Score=122.94 Aligned_cols=229 Identities=15% Similarity=0.199 Sum_probs=138.4
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCC-CCccc---hHHHHHHHHHHHHHcCCEEEEEcCCC--CCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPK-PFVGG---SSKVLDNAFDWAEKYGVKVIVDLHAA--PGSQNGNEHSAT 233 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~-~~~~~---~l~~ld~~v~~a~~~Gi~VilDlH~~--pg~qng~~~sg~ 233 (436)
++.|+.|+++|+|+|||.+.++. .++..+. .+..+ ..+.+.++++.|+++||+|+|+.|-. +|...+.-....
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~-~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~i~~~~ 134 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLM-EHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEK 134 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEE-SSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSB
T ss_pred HHHHHHHHHcCCCEEEEEeeecC-CCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEeeccCCcccccccccC
Confidence 57899999999999999886543 2332221 12222 68999999999999999999999964 332111101111
Q ss_pred CC--CCCCCC--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCC
Q 013777 234 RD--GFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 309 (436)
Q Consensus 234 ~~--~~~~w~--~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~ 309 (436)
.+ ....|. -....+.+.....++++. .|..|.+-|||.... .-..++.++++.||+++|. +|.....
T Consensus 135 ~~~~~~~~w~~~f~~y~~~i~~~a~~a~~~----~V~~~~IGNE~~~~~----~~~~~~~~Li~~vR~~~~g-~VTya~~ 205 (343)
T 3civ_A 135 EHGPDLESWEAWFGSYSDMMAHYAHVAKRT----GCEMFCVGCEMTTAE----PHEAMWRETIARVRTEYDG-LVTYNCN 205 (343)
T ss_dssp SCCTTSSBHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEESCTTTT----TCHHHHHHHHHHHHHHCCS-EEEEEEE
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHccCC----CceEEEECCCCCCCC----chHHHHHHHHHHHHhhCCC-CEEEEec
Confidence 11 112232 012222334444455544 467799999998532 2345777889999999997 5555422
Q ss_pred CCCCChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC----
Q 013777 310 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK---- 385 (436)
Q Consensus 310 ~~~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~---- 385 (436)
+...+...+. ..-.|++++.|.++.. .+... ..+..+.+..++||+++|+|+.....
T Consensus 206 ~~~~~~~~lw-----~~~DvIgin~Y~~~~~------w~~~~--------~~l~~~~~~~~KPIiitE~G~~s~~g~~~~ 266 (343)
T 3civ_A 206 HGREEHVRFW-----DAVDLISSSAYYPIDR------WRDRV--------PVLREVAEAHEKPLFFMEVGCPSRSGSGAC 266 (343)
T ss_dssp TTCTTTCSCG-----GGSSEEEEECCCCGGG------HHHHH--------HHHHHHHHHHTCCEEEEEECCCSBTTGGGS
T ss_pred Cccccccccc-----ccCCEEEEeccCCchh------HHHHH--------HHHHHHHHHhCCCEEEEeeCCCCCCCCCCC
Confidence 2111111111 2457899999987521 11111 22333333336679999999864211
Q ss_pred --------CcCHHHHHHHHHHHHHHHccC--CCcEEEEceec
Q 013777 386 --------DASKQDYQRFANAQLDVYGRA--TFGWAYWAHKC 417 (436)
Q Consensus 386 --------~~~~~~~~~~~~~q~~~~~~~--~~Gw~~W~~k~ 417 (436)
..+.+...+|+++.++++.+. ..|-+.|.|..
T Consensus 267 p~~~~~~~~~se~~Qa~~l~~~~~~~~~~~~~~G~~vW~w~~ 308 (343)
T 3civ_A 267 PWDYRHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPW 308 (343)
T ss_dssp TTCTTCCCCBCHHHHHHHHHHHHHHSCCCTTEEEEEEEEECS
T ss_pred CCcccCCCCCCHHHHHHHHHHHHHHHhcCCCccEEEEEEECC
Confidence 134566789999999998764 45788999876
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-12 Score=132.36 Aligned_cols=140 Identities=17% Similarity=0.240 Sum_probs=103.6
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..+ ++|++.|+++|+|++|+++.|-.+ .|. ++.++...++.+|++|+.|.++||.+||+||+..--+. -
T Consensus 64 D~Y~~~--~eDi~lm~~~G~~~~R~sisWsRi-~P~-~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~---L- 135 (454)
T 2o9p_A 64 DHFHHF--KEDVQLMKQLGFLHYRFSVAWPRI-MPA-AGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQW---I- 135 (454)
T ss_dssp CHHHHH--HHHHHHHHTTTCCEEEEECCHHHH-CSS-TTCCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHH---H-
T ss_pred chHHHH--HHHHHHHHhcCCceEEecccHHhh-CCC-CCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCccHH---H-
Confidence 566666 899999999999999999987644 455 45777889999999999999999999999985421110 0
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC-h-h------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA-L-D------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~-~-~------~~~~~~~~ 290 (436)
.....|. +...+.+.++++.+++||++. |..|.++|||.. |+.. . . .+......
T Consensus 136 ---~~~ggw~~r~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~ 210 (454)
T 2o9p_A 136 ---EDEGGWTQRETIQHFKTYASVIMDRFGER--INWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMCHGI 210 (454)
T ss_dssp ---HHTTGGGSTHHHHHHHHHHHHHHHHSSSS--CSEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---HhcCCCCCcchHHHHHHHHHHHHHHhCCc--ceeEEEecCcceecccccccCcCCCCcccHHHHHHHHHHHHHHHHH
Confidence 0001344 578899999999999999986 777999999973 1111 1 1 12223467
Q ss_pred HHHHHHhhCCCeEE
Q 013777 291 GYDAVRKYTSTAYV 304 (436)
Q Consensus 291 ~~~aIR~~~p~~~V 304 (436)
+++++|+.+|+..|
T Consensus 211 Av~~~r~~~~~~~I 224 (454)
T 2o9p_A 211 ASNLHKEKGLTGKI 224 (454)
T ss_dssp HHHHHHHTTCCSEE
T ss_pred HHHHHHhhCCCCeE
Confidence 78899998887544
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.40 E-value=4.2e-11 Score=128.88 Aligned_cols=204 Identities=13% Similarity=0.120 Sum_probs=135.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+.- .| + + ++++++|.++||+||.++... +. . ..
T Consensus 321 ~~dl~l~k~~G~N~iR~~h------~p--~-~---------~~~~dlcDe~Gi~V~~E~~~~-~~---------~-~~-- 369 (692)
T 3fn9_A 321 DFDLAAIMDVGATTVRFAH------YQ--Q-S---------DYLYSRCDTLGLIIWAEIPCV-NR---------V-TG-- 369 (692)
T ss_dssp HHHHHHHHHHTCCEEEETT------SC--C-C---------HHHHHHHHHHTCEEEEECCCB-SC---------C-CS--
T ss_pred HHHHHHHHHCCCCEEEecC------CC--C-c---------HHHHHHHHHCCCEEEEccccc-CC---------C-CC--
Confidence 6899999999999999931 11 1 1 678899999999999998432 10 0 00
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhh
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 319 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~ 319 (436)
+. .+.+.+.++.+.+|++++|+|+.|.+.|||.. ..+....+++++++.+|+.||+++|..+..+...+ ..
T Consensus 370 --~~-~~~~~~~~~~~v~r~rNHPSIi~Ws~gNE~~~---~~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~~-~~-- 440 (692)
T 3fn9_A 370 --YE-TENAQSQLRELIRQSFNHPSIYVWGLHNEVYQ---PHEYTAALTRSLHDLAKTEDPDRYTVSVNGYGHMD-HP-- 440 (692)
T ss_dssp --SC-HHHHHHHHHHHHHHHTTCTTEEEEEEEESCCS---SHHHHHHHHHHHHHHHHHHCTTSEEEEEESSSCTT-CT--
T ss_pred --HH-HHHHHHHHHHHHHHhcCCCcceEEEeccccCc---ccccHHHHHHHHHHHHHHHCCCCCEEEeCCCcccc-cc--
Confidence 23 67778899999999999999999999999974 23556789999999999999999999875432111 01
Q ss_pred ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhh-hcCCCeEEeecccccCCC-------------C
Q 013777 320 SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT-TSNGPLTFVGEWTCEWNV-------------K 385 (436)
Q Consensus 320 ~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~-~~~~p~v~vGEwg~~~~~-------------~ 385 (436)
....-.|+++|.|..|.. ...++....+ ..+. .....|++++|||+.... .
T Consensus 441 ---~~~~~Dv~~~n~Y~gWY~----~~~~~~~~~~--------~~~~~~~p~kPii~sEyG~~~~~g~~~~~~~~~~~~~ 505 (692)
T 3fn9_A 441 ---VNLNADIQGMNRYFGWYE----KKIQDIKPWV--------EQLEKDYPYQKLMLTEYGADANLAHQTEYLGDALNWG 505 (692)
T ss_dssp ---TCSSSSEEEEECCBTTTB----SCGGGHHHHH--------HHHHHHCTTCCEEEEECCCCCBTTCCCSCCCSCCCSS
T ss_pred ---ccccCCcccccccccccC----CchHHHHHHH--------HHHHHHhcCccEEEEEEcCCccccccccccccccccc
Confidence 122346899998864321 1122211111 1111 223556999999974210 0
Q ss_pred C--cCHHHHHHHHHHHHHHHcc--CCCcEEEEceecC
Q 013777 386 D--ASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCE 418 (436)
Q Consensus 386 ~--~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~ 418 (436)
+ .+.+....+.+...+++.+ .-+|-+.|++..-
T Consensus 506 ~~~~see~Q~~~~~~~~~~~~~~p~~~G~fvW~~~D~ 542 (692)
T 3fn9_A 506 KPFYPETFQTKTHEYQWSIIKDHPYIIASYLWNMFDF 542 (692)
T ss_dssp SSCCBHHHHHHHHHHHHHHHHHCTTSCEEEESCSBCE
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEEEeeec
Confidence 0 2333334556666666654 4678899988763
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-11 Score=127.61 Aligned_cols=141 Identities=19% Similarity=0.255 Sum_probs=103.5
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|++|+.|.|-.+ .|.+.+...+..++.++++|+.|.++||.+||+||+..--+.
T Consensus 68 D~Yh~y--~eDi~lm~~lG~~~yRfsIsWsRI-~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H~d~P~~----- 139 (479)
T 1gnx_A 68 DHYHRW--REDVALMAELGLGAYRFSLAWPRI-QPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQE----- 139 (479)
T ss_dssp CHHHHH--HHHHHHHHHTTCSEEEEECCHHHH-SGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chhhcC--HHHHHHHHHcCCCEEEecccHHHh-ccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccHH-----
Confidence 566666 899999999999999999988654 444324556779999999999999999999999986422110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC-hh-------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA-LD-------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~-~~-------~~~~~~~~ 290 (436)
......|. +..++.+.++++.+++||++. |-.|.++|||.. |+.. .. .+......
T Consensus 140 --L~~~GGw~~r~~v~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~lllAha~ 215 (479)
T 1gnx_A 140 --LENAGGWPERATAERFAEYAAIAADALGDR--VKTWTTLNEPWCSAFLGYGSGVHAPGRTDPVAALRAAHHLNLGHGL 215 (479)
T ss_dssp --HHHTTCTTSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --HHhcCCCCCHHHHHHHHHHHHHHHHHhCCc--ceeEEEecCcchhhhhhhccCcCCCCccChHHHHHHHHHHHHHHHH
Confidence 00012354 678999999999999999984 667999999973 1111 11 12233457
Q ss_pred HHHHHHhhC-CCeEE
Q 013777 291 GYDAVRKYT-STAYV 304 (436)
Q Consensus 291 ~~~aIR~~~-p~~~V 304 (436)
+++++|+.. |+..|
T Consensus 216 Av~~~r~~~~~~~~I 230 (479)
T 1gnx_A 216 AVQALRDRLPADAQC 230 (479)
T ss_dssp HHHHHHHHSCTTCEE
T ss_pred HHHHHHhhCCCCCeE
Confidence 888999988 77543
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.37 E-value=6.9e-11 Score=127.16 Aligned_cols=210 Identities=14% Similarity=0.100 Sum_probs=133.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+.- .| + + ++++++|.++||+|+.+++.... .++.. ....
T Consensus 307 ~~dl~~~k~~G~N~vR~~h------~p--~-~---------~~~~~~cD~~Gl~V~~e~~~~~~--~~~~~-----~~~~ 361 (667)
T 3cmg_A 307 EEDVALMREMGVNAIRLAH------YP--Q-A---------TYMYDLMDKHGIVTWAEIPFVGP--GGYAD-----KGFV 361 (667)
T ss_dssp HHHHHHHHHTTCCEEEETT------SC--C-C---------HHHHHHHHHHTCEEEEECCCBCC--TTSSS-----CSCC
T ss_pred HHHHHHHHHCCCCEEEecC------CC--C-C---------HHHHHHHHHCCCEEEEcccccCc--Ccccc-----cccc
Confidence 6789999999999999941 11 1 1 56788999999999999964311 01110 0000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhh
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 319 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~ 319 (436)
-.+...+.+.+.++.+++|++++|+|++|.+.|||... .+....+++++++.||+.||+++|..+..+.. .+.
T Consensus 362 ~~~~~~~~~~~~~~~~v~r~rNHPSIi~W~~gNE~~~~---~~~~~~~~~~l~~~vk~~DptRpvt~~~~~~~----~~~ 434 (667)
T 3cmg_A 362 DQASFRENGKQQLIELIRQHYNHPSICFWGLFNELKEV---GDNPVEYVKELNALAKQEDPTRPTTSASNQDG----NLN 434 (667)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCSS---SSCCHHHHHHHHHHHHHHCTTSCEEEEECCCS----GGG
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCEEEEEecccCCCcc---chhHHHHHHHHHHHHHHHCCCCcEEEeCCCCC----ccc
Confidence 11456677888999999999999999999999999742 12346788999999999999999988743321 111
Q ss_pred ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCC--------C------
Q 013777 320 SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV--------K------ 385 (436)
Q Consensus 320 ~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~--------~------ 385 (436)
..-.++++|.|..|.. . ..+.....+. .+ .....+.|++++|||+.... .
T Consensus 435 -----~~~Dv~~~n~Y~~wy~---~-~~~~~~~~~~-----~~--~~~~p~kPi~~sEyG~~~~~~~~~~~~~~~~~~~~ 498 (667)
T 3cmg_A 435 -----FITENIAWNRYDGWYG---S-TPKTLATFLD-----RT--HKKHPELRIGISEYGAGASIYHQQDSLKQPSASGW 498 (667)
T ss_dssp -----GSSSSEEEECCTTTSS---S-CTHHHHHHHH-----HH--HHHCTTCCEEEEEECCCCBTTCCCSSCCCCCTTSS
T ss_pred -----cccCEEEecccccccc---C-chhhhHHHHH-----HH--HHHCCCCcEEEEEECCCCCcccccccccccccccc
Confidence 1235689999965321 1 1111111111 11 11233556999999973210 0
Q ss_pred CcCHHHHHHHHHHHHHHHcc--CCCcEEEEceec
Q 013777 386 DASKQDYQRFANAQLDVYGR--ATFGWAYWAHKC 417 (436)
Q Consensus 386 ~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~ 417 (436)
..+.+....+.+.+.+++.+ ..+|-++|++..
T Consensus 499 ~~~e~~q~~~~~~~~~~~~~~~~~~G~fvW~~~D 532 (667)
T 3cmg_A 499 WHPENWQTYYHMENWKIIAERPFVWGTFVWNMFD 532 (667)
T ss_dssp CCBHHHHHHHHHHHHHHHHTCTTCCCEEESCSBC
T ss_pred cCcHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Confidence 01223334455666666653 457999999874
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.37 E-value=5.1e-12 Score=131.26 Aligned_cols=257 Identities=16% Similarity=0.213 Sum_probs=139.8
Q ss_pred hhHHHHHhhhhcCCHHHHHHH-HhCCCCEEEecCccccccCC---CCCC-CCccchHHHHHHHHHHHHHcCCEEEEEcCC
Q 013777 146 APQVLQDHWDSYITDEDFKFL-SSNGINAVRIPVGWWIANDP---TPPK-PFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 220 (436)
Q Consensus 146 a~~~~~~h~~~~ite~d~~~i-a~~G~N~VRipv~~~~~~~~---~~~~-~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~ 220 (436)
+...++..| ++.++.+ +++||..||++--+...+.. .++. .| .+..+|++++.|.++||++++.|..
T Consensus 35 ~~~~l~~d~-----~~~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y---~~~~~D~~~d~~~~~G~~p~~~l~~ 106 (500)
T 4ekj_A 35 PGTLIREDS-----QAQLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVY---DWTKIDQLYDALLAKGIKPFIELGF 106 (500)
T ss_dssp HHHHTSHHH-----HHHHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEE---CCHHHHHHHHHHHHTTCEEEEEECC
T ss_pred chhhcChHH-----HHHHHHHHHhcCceEEEECCccccccceeecCCCCeec---chHHHHHHHHHHHHCCCEEEEEEeC
Confidence 444454444 3455555 57999999985322100000 0111 11 4789999999999999999999988
Q ss_pred CCCCCCCCCCCCCCCCCCCCC----hhHHHHH----HHHHHHHHHHhCCCC-ceeEEEeecCCCCCC----CChhHHHHH
Q 013777 221 APGSQNGNEHSATRDGFQEWG----DSNVADT----VAVIDFLAARYANRP-SLAAIELINEPLAPG----VALDTLKSY 287 (436)
Q Consensus 221 ~pg~qng~~~sg~~~~~~~w~----~~~~~~~----~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~----~~~~~~~~~ 287 (436)
.|...... ......|. +...+.+ .++.+.+++||+... .+..||+.|||.... .+.+.+.++
T Consensus 107 ~P~~~~~~-----~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~RYg~~~v~~w~~EvwNEp~~~~~~~~~~~~~y~~l 181 (500)
T 4ekj_A 107 TPEAMKTS-----DQTIFYWKGNTSHPKLGPWRDLIDAFVHHLRARYGVEEVRTWFFEVWNEPNLDGFWEKADQAAYFEL 181 (500)
T ss_dssp BCGGGCSS-----CCEETTTTEECSCCCHHHHHHHHHHHHHHHHHHHCHHHHHTSEEEESSCTTSTTTSGGGCHHHHHHH
T ss_pred CchhhcCC-----CCccccccCCCCcccHHHHHHHHHHHHHHHHHhhCccccceeEEEEEECCCCccCCCCCCHHHHHHH
Confidence 77532110 00011111 2223333 355666777786433 566799999998542 356789999
Q ss_pred HHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhccC--CCCCcEEEEEeecCcCCCCCC---------CCChhhhHHHHHH
Q 013777 288 YKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFA--SGLSRVVIDVHYYNLFSNNFN---------GLNVQQNIDYVNN 356 (436)
Q Consensus 288 ~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~~~--~~~~nvv~~~H~Y~~~~~~~~---------~~~~~~~i~~i~~ 356 (436)
++.++++||+++|+..|+.++.-+......++... .+..-.++++|.|........ ....+..+..+..
T Consensus 182 ~~~~~~aik~~~P~~~Vgg~~~~~~~~~~~fl~~~~~~~~~~D~is~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (500)
T 4ekj_A 182 YDVTARAIKAIDPSLRVGGPATAGAAWVPEFLAHVKKSGSAVDFVTTHTYGVDGGFLDEKGVQDTKLSPSPDAVVGDVRR 261 (500)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEEGGGCSHHHHHHHHHHTTCCCSEEEEEEESEEEEEECTTSCEEEEECCSTTTTHHHHHH
T ss_pred HHHHHHHHHhhCCccccccCccCCccccHHHHHHHHhcCCccceEEeeccCCCCCCcccccccccccccCHHHHHHHHHH
Confidence 99999999999999887654211111223333221 233456899999963110000 0112222222221
Q ss_pred hhhhhHHHhhhcCCCeEEeecccccCCCCC--cCHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 357 QRASDLGAVTTSNGPLTFVGEWTCEWNVKD--ASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 357 ~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~--~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
-+ +.+... .....|++++|||....... .+......|+...+........+-.||++..
T Consensus 262 ~r-~~l~~~-~~~~~pi~itE~g~~~~~~~~~~~~~~~Aa~i~~~~~~~~~~~~~~~~w~~~d 322 (500)
T 4ekj_A 262 VR-EQIEAS-AFPGLPLYFTEWSTSYTPRDSVHDSYVSAAYIVEKLRRVKGLVQAMSYWTYSD 322 (500)
T ss_dssp HH-HHHHTT-TSTTCCEEEEEEESCSCTTCTTTTSTHHHHHHHHHHHHHTTTCSEEEESCSBS
T ss_pred HH-HHHHHh-CCCCCcEEEEeccCCCCCCCccccHHHHHHHHHHHHHHhhhhCceeeEEEEEe
Confidence 11 111111 11235699999997543211 1112234444333322233455778898765
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.36 E-value=2.1e-11 Score=125.07 Aligned_cols=271 Identities=13% Similarity=0.180 Sum_probs=161.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCC-----------------CCc------------cchHHHHHH
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK-----------------PFV------------GGSSKVLDN 202 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~-----------------~~~------------~~~l~~ld~ 202 (436)
+||+.| ++|++.|+++|+|++|+.+.|-.+ .|.+.. .+. +..++.+++
T Consensus 57 d~Y~~y--~eDi~lm~~~G~~~~R~sisWsRi-~P~~g~~~~~~v~~~~~~~~~~~~~n~~~~~~l~~~~n~~g~~~Y~~ 133 (481)
T 1qvb_A 57 GYWNLN--QNDHDLAEKLGVNTIRVGVEWSRI-FPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVE 133 (481)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHH-CSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHH
T ss_pred chHHHH--HHHHHHHHHcCCCccEeccchhhh-CCCCCCCccccccccccccccccccccccchhhhhhhcHHHHHHHHH
Confidence 577766 899999999999999999987544 454431 456 667999999
Q ss_pred HHHHHHHcCCEEEEEcCCCCCCCCCCCC-----CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 203 AFDWAEKYGVKVIVDLHAAPGSQNGNEH-----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 203 ~v~~a~~~Gi~VilDlH~~pg~qng~~~-----sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
+|+.+.++||.+||.|++..--+.-.+. .|.+.....|. +...+.+.++.+.+++||++. |..|..+|||..
T Consensus 134 ~id~l~~~Gi~p~vtL~H~~lP~~L~~~~~~~~~~~~~~~gGw~n~~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~ 211 (481)
T 1qvb_A 134 MYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGEL--PVMWSTMNEPNV 211 (481)
T ss_dssp HHHHHHTTTCEEEEESCCSCCBTTTBCHHHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTTS--CSEEEEEECHHH
T ss_pred HHHHHHHCCCEEEEEeCCCCCCHHHHhcCCcccccccccCCCcCCchHHHHHHHHHHHHHHHhCCC--ccEEEEecccch
Confidence 9999999999999999864321110000 00111122465 678899999999999999986 777999999973
Q ss_pred C----------CCCh-----h-------HHHHHHHHHHHHHHhhCCCeE-EEEeCCC-C--CCCh------hh-----hh
Q 013777 277 P----------GVAL-----D-------TLKSYYKAGYDAVRKYTSTAY-VIMSNRL-G--PADH------KE-----LL 319 (436)
Q Consensus 277 ~----------~~~~-----~-------~~~~~~~~~~~aIR~~~p~~~-Viv~~~~-~--~~~~------~~-----~~ 319 (436)
. +.++ . .+.....++++++|+..|+.+ |++...+ . +.+. .. ++
T Consensus 212 ~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~~llAHa~A~~~~r~~~~~~IGi~~~~~~~~P~~~d~~aa~~~~~~~~~~fl 291 (481)
T 1qvb_A 212 VYEQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKKPVGLIYAFQWFELLEGPAEVFDKFKSSKLYYFT 291 (481)
T ss_dssp HHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEECCEEECSSSCCSHHHHHHHHHTSTTT
T ss_pred hhcccccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCcEEEEeeCCeeecCCCCHHHHHHHHHHHhhhhh
Confidence 1 1100 0 112223567888999888732 2222211 0 1111 00 01
Q ss_pred cc------C--------CCCCcEEEEEeecCcCCC-----------CC---------CC-----CChhhhH--HHHHHhh
Q 013777 320 SF------A--------SGLSRVVIDVHYYNLFSN-----------NF---------NG-----LNVQQNI--DYVNNQR 358 (436)
Q Consensus 320 ~~------~--------~~~~nvv~~~H~Y~~~~~-----------~~---------~~-----~~~~~~i--~~i~~~~ 358 (436)
+. + ....-..+.+++|....- .. .. ....+.+ .-++.
T Consensus 292 d~~~~G~yp~~~~~~~~~~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~GL~~-- 369 (481)
T 1qvb_A 292 DIVSKGSSIINVEYRRDLANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVYPEGLYL-- 369 (481)
T ss_dssp THHHHSCCSSCCCCCTTTSSCCSEEEEECCCEEEEECCTTCCEECTTSGGGSCTTCBCTTSCBBCTTCCBCCTHHHHH--
T ss_pred HHHhCCCCCCCCCCCHHHcCCCceEEEecccceEEeccCcccccCCccccccccccccCCCCCcCCCCCccchHHHHH--
Confidence 10 0 022347788888864210 00 00 0000000 11111
Q ss_pred hhhHHHh-hhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHcc--CCCcEEEEceecCCCCCChHHHHhCCCc
Q 013777 359 ASDLGAV-TTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGYI 433 (436)
Q Consensus 359 ~~~~~~~-~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~~~~Ws~~~~~~~g~~ 433 (436)
.+..+ .+. ++|++|+|.|.....+....+.+++++.+.+++.+. .-.|++.|++-.. -.|......+-|++
T Consensus 370 --~L~~~~~rY-~~Pi~ITENG~~~~~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn-~EW~~Gy~~RfGLv 443 (481)
T 1qvb_A 370 --LLKELYNRY-GVDLIVTENGVSDSRDALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDN-YEWAQGFRQKFGLV 443 (481)
T ss_dssp --HHHHHHHHH-CCEEEEEECCCCCTTCSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC-CCGGGTTSSCCCSE
T ss_pred --HHHHHHHHh-CCCEEEEeCCCCccccHHHHHHHHHHHHHHHHHHHcCCCEEEEEecccccc-ccccCCCCCCceEE
Confidence 12222 233 456999999986543334456678888888877765 3479999998763 34665444455544
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.33 E-value=4.7e-12 Score=130.28 Aligned_cols=143 Identities=19% Similarity=0.240 Sum_probs=104.3
Q ss_pred HHhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 151 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 151 ~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
-+||..+ ++|++.|+++|+|++|+++.|-.+ .|.. .+...+..++.+|++|+.|.++||.+||+||+..-.+.-
T Consensus 67 ~D~Y~~~--~eDi~lm~~~G~~~~R~sisW~Ri-~P~G~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l-- 141 (479)
T 2xhy_A 67 VDFYGHY--KEDIKLFAEMGFKCFRTSIAWTRI-FPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHL-- 141 (479)
T ss_dssp TCHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-SSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH--
T ss_pred ccchhhh--HHHHHHHHHcCCCEEEeeCCHHHh-CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCHHH--
Confidence 4677666 899999999999999999998654 4442 345667799999999999999999999999975321100
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-------------C-Ch--h-HHH------
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-------------V-AL--D-TLK------ 285 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~-------------~-~~--~-~~~------ 285 (436)
.+....|. +..++.+.++++.+++||++. |..|.++|||.... . .+ . ...
T Consensus 142 ----~~~~ggw~~~~~~~~F~~ya~~~~~~~gd~--V~~w~t~NEp~~~~~~~~gy~~~~~~G~~~Pg~~~~~~~~~~a~ 215 (479)
T 2xhy_A 142 ----VQQYGSWTNRKVVDFFVRFAEVVFERYKHK--VKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVL 215 (479)
T ss_dssp ----HHHSCGGGSTHHHHHHHHHHHHHHHHTTTT--CCEEEEETTTTGGGSTTSTTHHHHHHSCCGGGSSSHHHHHHHHH
T ss_pred ----HhhcCCCCCHHHHHHHHHHHHHHHHHhCCC--CCcEEEecCcchhhhccccccccccccccCCCccccHHHHHHHH
Confidence 00012354 678999999999999999984 55799999997531 0 00 0 111
Q ss_pred ----HHHHHHHHHHHhhCCCeEE
Q 013777 286 ----SYYKAGYDAVRKYTSTAYV 304 (436)
Q Consensus 286 ----~~~~~~~~aIR~~~p~~~V 304 (436)
....++++++|+.+|+..|
T Consensus 216 h~~llAha~Av~~~r~~~~~~~I 238 (479)
T 2xhy_A 216 HHQFVASALAVKAARRINPEMKV 238 (479)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCeE
Confidence 2234778889999887555
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.5e-11 Score=124.17 Aligned_cols=270 Identities=16% Similarity=0.208 Sum_probs=159.8
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCC--CCc---------------------------cchHHHHHH
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK--PFV---------------------------GGSSKVLDN 202 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~--~~~---------------------------~~~l~~ld~ 202 (436)
+||+.| ++|++.|+++|+|++|+.+.|-. ..|.+.. .++ +..++.+++
T Consensus 57 d~Y~~y--~eDi~l~~~lG~~~~R~si~WsR-I~P~~g~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~an~~g~~~Y~~ 133 (473)
T 3apg_A 57 AYWHLY--KQDHDIAEKLGMDCIRGGIEWAR-IFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRK 133 (473)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHH-HCCSCCTTSCCEEEECTTSCEEEEECCHHHHHHHHHHSCHHHHHHHHH
T ss_pred cchhHH--HHHHHHHHHcCCCEEEEecchhh-ccccCCCCCCcccccccccccccccchhhHHHHHHhhhhHHHHHHHHH
Confidence 577766 89999999999999999998754 4555421 555 667999999
Q ss_pred HHHHHHHcCCEEEEEcCCCCCCCCCCCCCC------CCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 203 AFDWAEKYGVKVIVDLHAAPGSQNGNEHSA------TRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 203 ~v~~a~~~Gi~VilDlH~~pg~qng~~~sg------~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
+|+.++++||++||.|++..--+.-.+. + .......|. +...+.+.++.+.+++||++. |..|.++|||.
T Consensus 134 ~id~l~~~Gi~pivtL~H~~lP~wl~d~-~~~~~~~~~~~~~Gw~~~~~v~~F~~ya~~~~~~~gd~--V~~W~t~NEp~ 210 (473)
T 3apg_A 134 IYSDWKERGKTFILNLYHWPLPLWIHDP-IAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDL--VDMWSTMNEPN 210 (473)
T ss_dssp HHHHHHTTTCEEEEESCCSCCCTTTBCH-HHHHHHCTTSSCBGGGSHHHHHHHHHHHHHHHHHHGGG--CSEEEEEECHH
T ss_pred HHHHHHHCCCEEEEEeCCCCCCHHHHhC-CCccccccCCccCCCCCccHHHHHHHHHHHHHHHhCCc--ceEEEEecCcc
Confidence 9999999999999999764321110000 0 000122466 678899999999999999986 77799999996
Q ss_pred CC----------CCCh-----h-------HHHHHHHHHHHHHHhhCCCeE-EEEeCCC-CCCC---hhhhhc------c-
Q 013777 276 AP----------GVAL-----D-------TLKSYYKAGYDAVRKYTSTAY-VIMSNRL-GPAD---HKELLS------F- 321 (436)
Q Consensus 276 ~~----------~~~~-----~-------~~~~~~~~~~~aIR~~~p~~~-Viv~~~~-~~~~---~~~~~~------~- 321 (436)
.. +.++ . .+......+++++|+..+..+ |++...+ .+.+ ...... +
T Consensus 211 ~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h~lllAHa~A~~~~r~~~~~~IGi~~~~~~~~P~~~~~~~d~~aa~~~~~~~ 290 (473)
T 3apg_A 211 VVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEF 290 (473)
T ss_dssp HHHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTSCCSEEEEEEECCEEEESSGGGHHHHHHHHHHHHHH
T ss_pred hhhcccccccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCeeecCCCCCHHHHHHHHHHhhhc
Confidence 31 1111 1 112233677888998744332 2333221 1111 100000 0
Q ss_pred CC----CCCcEEEEEeecCcCC----CC---------C-------CC-----CChhhh--HHHHHHhhhhhHHHh-hhcC
Q 013777 322 AS----GLSRVVIDVHYYNLFS----NN---------F-------NG-----LNVQQN--IDYVNNQRASDLGAV-TTSN 369 (436)
Q Consensus 322 ~~----~~~nvv~~~H~Y~~~~----~~---------~-------~~-----~~~~~~--i~~i~~~~~~~~~~~-~~~~ 369 (436)
.+ ......+.+++|.... .. + .. ....+. ..-++. .+..+ .+.+
T Consensus 291 ~dp~~d~~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~GL~~----~L~~~~~rY~ 366 (473)
T 3apg_A 291 VTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLEN----LLKYLNNAYE 366 (473)
T ss_dssp HHHHHHTTCCSCEEEECCCEEEEEESSSSEEECTTSGGGSCTTSBCTTSCBBCTTSCBCCHHHHHH----HHHHHHHHHC
T ss_pred CceeEecCCCCeeEEcCccceEEecCCccccCCCCcccccccccccCCCCCcCCCCCcccHHHHHH----HHHHHHHHhC
Confidence 00 1234566677765320 00 0 00 000000 111111 12222 2344
Q ss_pred CCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHcc--CCCcEEEEceecCCCCCChHHHHhCCCc
Q 013777 370 GPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGYI 433 (436)
Q Consensus 370 ~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~~~~Ws~~~~~~~g~~ 433 (436)
. |++|+|.|.....+....+.+++++++..++.++ .-.|++.|++-.. -.|......+.|++
T Consensus 367 ~-Pi~ITENG~~~~~D~~Ri~yl~~hl~~~~~Ai~dGv~V~GY~~WSl~Dn-~EW~~Gy~~RfGL~ 430 (473)
T 3apg_A 367 L-PMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDN-YEWAQGFRMRFGLV 430 (473)
T ss_dssp C-CEEEEECCCCCTTCSSHHHHHHHHHHHHHHHHTTTCCEEEEEESCSBCC-CCGGGGGGSCCCSE
T ss_pred C-eEEEEecCCCCCCchHHHHHHHHHHHHHHHHHHcCCCEEEEEEeccccc-CcccccccCcCCeE
Confidence 4 6999999986543334455677888888888864 3469999999773 44776655666655
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=7.5e-12 Score=134.55 Aligned_cols=143 Identities=15% Similarity=0.241 Sum_probs=103.3
Q ss_pred hhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCC----------
Q 013777 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP---------- 222 (436)
Q Consensus 153 h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~p---------- 222 (436)
||.....++|++.||++|+|+||+++..|...+|.+ +.| .++.||++|+.|+++||+|||.++...
T Consensus 19 ~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~-g~~---~f~~ld~~i~~~~~~Gi~vil~~~~~~~P~Wl~~~~P 94 (675)
T 3tty_A 19 QWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDE-VSY---DFTWLDDIIERLTKENIYLCLATSTGAHPAWMAKKYP 94 (675)
T ss_dssp GSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSS-SCB---CCHHHHHHHHHHHHTTCEEEEECCTTSCCHHHHHHCG
T ss_pred hCCHHHHHHHHHHHHHcCCCEEEEeeechhhhCCcC-Ccc---CHHHHHHHHHHHHHCCCEEEEeCCCCCCChhhhhcCC
Confidence 344444489999999999999999985555666654 345 378999999999999999999987421
Q ss_pred C----CCCCCC-CCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC---hhHHHHHHHHHHHH
Q 013777 223 G----SQNGNE-HSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA---LDTLKSYYKAGYDA 294 (436)
Q Consensus 223 g----~qng~~-~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~---~~~~~~~~~~~~~a 294 (436)
. ..+|.. ..|.+.....-++..++.+.++++.|++||+++|.|++|++.|||.....+ ...+++|+++.|..
T Consensus 95 e~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~Vi~w~v~NE~g~~~y~~~~~~~Fr~wLk~kY~t 174 (675)
T 3tty_A 95 DVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKDHPQIVMWHVSNEYGGYCYCDNCEKQFRVWLKERYGT 174 (675)
T ss_dssp GGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTTCTTEEEEECSSSCCCCCCSHHHHHHHHHHHHHHHSS
T ss_pred ceeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEEccccCCCcCCHHHHHHHHHHHHHHhcC
Confidence 1 011110 012221111112678899999999999999999999999999999853222 45688899988877
Q ss_pred HHhhC
Q 013777 295 VRKYT 299 (436)
Q Consensus 295 IR~~~ 299 (436)
|.+.+
T Consensus 175 i~~LN 179 (675)
T 3tty_A 175 LEALN 179 (675)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2.6e-11 Score=123.43 Aligned_cols=138 Identities=16% Similarity=0.241 Sum_probs=102.3
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|++|+.+.|..+ .|...++..+..++..|++|+.|.++||.+||+||+..--|.-
T Consensus 55 D~Yhry--~eDi~l~~~lG~~~~R~si~W~Ri-~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H~dlP~~L---- 127 (444)
T 4hz8_A 55 DHYHRY--EQDLDLMRQLGLKTYRFSIAWARI-QPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWV---- 127 (444)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-SCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH----
T ss_pred chhhhH--HHHHHHHHhcCCCEEEEeccHHHc-CcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCHHH----
Confidence 567666 899999999999999999988655 4544356667799999999999999999999999975321100
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCC-Ch-h------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-D------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~-~~-~------~~~~~~~~ 290 (436)
.....|. +...+.+.++.+.+++||++. |--|..+|||.. |+. +. . .+......
T Consensus 128 ---~~~GGW~nr~~v~~F~~Ya~~~~~~~gdr--Vk~W~T~NEp~~~~~~gy~~g~~~Pg~~~~~~~~~~~h~~llAha~ 202 (444)
T 4hz8_A 128 ---EDEGGWLSRESASRFAEYTHALVAALGDQ--IPLWVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRVAHHLLLSHGQ 202 (444)
T ss_dssp ---HHTTGGGSTHHHHHHHHHHHHHHHHHGGG--CSEEEEEECHHHHHHHHHTSCSSTTCCCCGGGHHHHHHHHHHHHHH
T ss_pred ---hhCcCCCChHHHHHHHHHHHHHHHHhCcc--CCeEEEccCcchhhhccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 0012355 688999999999999999985 555789999973 111 11 1 12234457
Q ss_pred HHHHHHhhCCC
Q 013777 291 GYDAVRKYTST 301 (436)
Q Consensus 291 ~~~aIR~~~p~ 301 (436)
+++++|+..|+
T Consensus 203 Av~~~r~~~~~ 213 (444)
T 4hz8_A 203 ALQAFRALSPA 213 (444)
T ss_dssp HHHHHHHHCCT
T ss_pred HHHHHHHhCCc
Confidence 78889999887
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=99.26 E-value=9e-11 Score=119.95 Aligned_cols=141 Identities=16% Similarity=0.197 Sum_probs=103.9
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|++|+.|.|-.+ .|...+.+.+..++..+++|+.|.++||.+||+|++..--|.
T Consensus 63 D~Yhry--~eDi~Lm~elG~~~yRfSIsWsRI-~P~g~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL~H~dlP~~----- 134 (458)
T 3ta9_A 63 DHYHLY--REDIELMKEIGIRSYRFSTSWPRI-LPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQA----- 134 (458)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chHHhH--HHHHHHHHHcCCCEEEecCcHHHh-CcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHh-----
Confidence 566666 899999999999999999998654 454435667789999999999999999999999997532111
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCC-Chh-------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-ALD-------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~-~~~-------~~~~~~~~ 290 (436)
......|. +..++.+.++.+.+++||++. |--|-.+|||.. |+. +.. .+..-...
T Consensus 135 --L~~~GGW~nr~~v~~F~~YA~~~f~~fgdr--Vk~W~T~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~h~~llAha~ 210 (458)
T 3ta9_A 135 --LQDKGGWTNRDTAKYFAEYARLMFEEFNGL--VDLWVTHNEPWVVAFEGHAFGNHAPGTKDFKTALQVAHHLLLSHGM 210 (458)
T ss_dssp --HHTTTGGGSHHHHHHHHHHHHHHHHHTTTT--CCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --HHhcCCCCCHHHHHHHHHHHHHHHHHhcCc--CCEEEEecCcchhhcccccccccCCCcCCHHHHHHHHHHHHHHHHH
Confidence 00123465 788999999999999999986 444779999973 111 111 12223456
Q ss_pred HHHHHHhhCCCeEE
Q 013777 291 GYDAVRKYTSTAYV 304 (436)
Q Consensus 291 ~~~aIR~~~p~~~V 304 (436)
+++++|+..|+..|
T Consensus 211 Av~~~r~~~~~~~I 224 (458)
T 3ta9_A 211 AVDIFREEDLPGEI 224 (458)
T ss_dssp HHHHHHHHTCSSEE
T ss_pred HHHHHHHhCCCCeE
Confidence 77888998887544
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.23 E-value=3.7e-10 Score=109.88 Aligned_cols=224 Identities=14% Similarity=0.158 Sum_probs=139.7
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATR 234 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qng~~~sg~~ 234 (436)
+.+.+.+...+||.|++ .+.|. ..+|.++ .| .++.+|+++++|+++||+|+... |. |.+.+-.
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW~-~~ep~~g-~~---~~~~~D~~v~~a~~~gi~v~gh~lvW~~----~~P~W~~--- 93 (302)
T 1nq6_A 26 EAAYASTLDAQFGSVTPENEMKWD-AVESSRN-SF---SFSAADRIVSHAQSKGMKVRGHTLVWHS----QLPGWVS--- 93 (302)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSHH-HHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEEEST----TCCTTTT---
T ss_pred CHHHHHHHHhcCCeEEEcCceeec-cccCCCC-cC---CcHHHHHHHHHHHHCCCEEEEEecccCC----CCChhhh---
Confidence 56788888889999999 67665 4456442 44 46889999999999999997432 42 2222211
Q ss_pred CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChhHH-----HHHHHHHHHHHHhhCCCeEE
Q 013777 235 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRKYTSTAYV 304 (436)
Q Consensus 235 ~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~~~p~~~V 304 (436)
.|. +...+.+.++++.+++||++ .|.+|++.|||..... ....| ..|...+++++|+.+|+..+
T Consensus 94 ----~~~~~~~~~~~~~~i~~v~~ry~g--~v~~WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~af~~Ar~~dP~a~L 167 (302)
T 1nq6_A 94 ----PLAATDLRSAMNNHITQVMTHYKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKL 167 (302)
T ss_dssp ----TSCHHHHHHHHHHHHHHHHHHTTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEE
T ss_pred ----cCCHHHHHHHHHHHHHHHHHHcCC--ceEEEEeecCccccCCCCccccCHHHHhcCHHHHHHHHHHHHHhCCCCEE
Confidence 133 56778889999999999997 6888999999986321 01112 24789999999999999888
Q ss_pred EEeCC--CCCC-Chh---hhhc----cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEE
Q 013777 305 IMSNR--LGPA-DHK---ELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTF 374 (436)
Q Consensus 305 iv~~~--~~~~-~~~---~~~~----~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~ 374 (436)
++.+- .... ... .+.. ...+.+-+-+..|.+... ..++. +.. .+..+... +.||+
T Consensus 168 ~~Ndy~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~q~H~~~~~------~~~~~-~~~-------~l~~~a~~-g~pi~ 232 (302)
T 1nq6_A 168 CYNDYNTDGQNAKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNS------PVPSD-FQA-------NLQRFADL-GVDVQ 232 (302)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTB------CCCTT-HHH-------HHHHHHTT-TCEEE
T ss_pred EecccccccCchHHHHHHHHHHHHHHCCCCcceEEEEEeecCCC------CCHHH-HHH-------HHHHHHhc-CCcEE
Confidence 88631 1101 001 1111 111245565666887321 01121 111 12222223 55799
Q ss_pred eecccccCCCCCcCHHHHHHHHHHHHHHHcc--CCCcEEEEceecCCCCC
Q 013777 375 VGEWTCEWNVKDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHW 422 (436)
Q Consensus 375 vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~~~~W 422 (436)
|+|++... +.+...++++..+.++.+ ...|.++|.+.. +..|
T Consensus 233 iTE~di~~-----~~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D-~~sW 276 (302)
T 1nq6_A 233 ITELDIEG-----SGSAQAANYTKVVNACLAVTRCTGITVWGVTD-KYSW 276 (302)
T ss_dssp EEEEEECC-----CHHHHHHHHHHHHHHHHTSTTEEEEEESCSCG-GGCT
T ss_pred EeeCCCCC-----chHHHHHHHHHHHHHHHhCCCceEEEEEcCCC-CCCc
Confidence 99999753 233345566666665543 457999999876 3345
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2.7e-10 Score=111.54 Aligned_cols=228 Identities=16% Similarity=0.209 Sum_probs=140.2
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEE-c--CCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD-L--HAAPGSQNGNEHSATR 234 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilD-l--H~~pg~qng~~~sg~~ 234 (436)
+.+++.|...+||.||+ .+.|. ..+|.+ +.| .+..+|+++++|+++||+|+.. | |. |.+.+-
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW~-~~ep~~-g~~---~~~~~D~~~~~a~~~gi~v~ghtl~W~~----~~P~W~---- 92 (315)
T 3cui_A 26 EAQYKAIADSEFNLVVAENAMKWD-ATEPSQ-NSF---SFGAGDRVASYAADTGKELYGHTLVWHS----QLPDWA---- 92 (315)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSHH-HHCSBT-TBC---CCHHHHHHHHHHHHHTCEEEEEEEEESS----SCCHHH----
T ss_pred CHHHHHHHHhcCCEEEECCcccHH-HhCCCC-CcC---ChHHHHHHHHHHHHCCCEEEEEeeecCC----CCCHHH----
Confidence 46788888899999999 67664 445543 244 3688999999999999998653 2 32 111110
Q ss_pred CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-C--ChhHH-----HHHHHHHHHHHHhhCCCeEEE
Q 013777 235 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-V--ALDTL-----KSYYKAGYDAVRKYTSTAYVI 305 (436)
Q Consensus 235 ~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~-~--~~~~~-----~~~~~~~~~aIR~~~p~~~Vi 305 (436)
..+. +...+...++++.+++||++. |.+||+.|||.... . ....| ..|.+.+++++|+.+|+..|+
T Consensus 93 ---~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af~~Ar~~dP~a~l~ 167 (315)
T 3cui_A 93 ---KNLNGSAFESAMVNHVTKVADHFEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLC 167 (315)
T ss_dssp ---HTCCHHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEEE
T ss_pred ---hcCCHHHHHHHHHHHHHHHHHHcCCc--eEEEEeecccccCCCCccccchHHHhccHHHHHHHHHHHHhhCCCCEEE
Confidence 0122 466778889999999999984 88899999998632 1 01122 468899999999999999988
Q ss_pred EeCC-CCCCCh-----hhhhc----cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEe
Q 013777 306 MSNR-LGPADH-----KELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 375 (436)
Q Consensus 306 v~~~-~~~~~~-----~~~~~----~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~v 375 (436)
+.+- ...... ..+.. ...+.+-+-+..|..... .++. +. +.+..+... +.||+|
T Consensus 168 ~ndy~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~-------~~~~-~~-------~~l~~~a~~-g~pv~i 231 (315)
T 3cui_A 168 INDYNVEGINAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQ-------VPGD-FR-------QNLQRFADL-GVDVRI 231 (315)
T ss_dssp EEESSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTC-------CCTT-HH-------HHHHHHHTT-TCEEEE
T ss_pred ECCccccCcchHHHHHHHHHHHHHHCCCcccEEEeeeecCCCC-------CHHH-HH-------HHHHHHHhc-CCceEE
Confidence 8642 111111 11111 112234455556755321 1111 11 122233333 567999
Q ss_pred ecccccCCCCC--cCHHHHHHHHHHHHHHHcc--CCCcEEEEceecCCCCC
Q 013777 376 GEWTCEWNVKD--ASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHW 422 (436)
Q Consensus 376 GEwg~~~~~~~--~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~~~~W 422 (436)
+|++....... .+.+...++++..+.++-+ ...|-++|.+... ..|
T Consensus 232 TE~di~~~~~~~~~~~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D~-~sW 281 (315)
T 3cui_A 232 TELDIRMRTPSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITDK-YSW 281 (315)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBTT-TCS
T ss_pred EecccccCCCCChHHHHHHHHHHHHHHHHHHhCCCceEEEEEeCCCC-Ccc
Confidence 99997632111 1223445666666666544 3579999998663 445
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.19 E-value=5.4e-10 Score=110.79 Aligned_cols=233 Identities=13% Similarity=0.174 Sum_probs=142.1
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATR 234 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qng~~~sg~~ 234 (436)
+.+.+.|...+||.|++ .+.|. ..+|.++ .| .+..+|+++++|+++||+|+... |. |.+.+-..
T Consensus 52 ~~~~~~~~~~~fn~vt~en~~kW~-~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~----q~P~W~~~-- 120 (347)
T 1xyz_A 52 DPTYNSILQREFSMVVCENEMKFD-ALQPRQN-VF---DFSKGDQLLAFAERNGMQMRGHTLIWHN----QNPSWLTN-- 120 (347)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSHH-HHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSS----SCCHHHHT--
T ss_pred hHHHHHHHHhcCCEEEECCcccHH-HhcCCCC-cC---ChHHHHHHHHHHHHCCCEEEEEeeeccc----cCcHHHhc--
Confidence 36788888889999999 77664 4455442 34 36889999999999999997432 42 22111110
Q ss_pred CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC---ChhHH-----HHHHHHHHHHHHhhCCCeEEE
Q 013777 235 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTL-----KSYYKAGYDAVRKYTSTAYVI 305 (436)
Q Consensus 235 ~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~---~~~~~-----~~~~~~~~~aIR~~~p~~~Vi 305 (436)
..+. +...++..++++.+++||++. |.+|++.|||..... ....| ..|.+.+++++|+.+|+..++
T Consensus 121 ---~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a~L~ 195 (347)
T 1xyz_A 121 ---GNWNRDSLLAVMKNHITTVMTHYKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLF 195 (347)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEE
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhCCe--eEEEEeecccccCCCcccccChHHHhcCHHHHHHHHHHHHhhCCCCEEE
Confidence 0123 467788899999999999986 888999999986321 11122 368899999999999999988
Q ss_pred EeCCCC-CCCh-----hhhh----ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEe
Q 013777 306 MSNRLG-PADH-----KELL----SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 375 (436)
Q Consensus 306 v~~~~~-~~~~-----~~~~----~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~v 375 (436)
+.+-.. .... ..+. ......+.+-+..|....+ +.. .+..+. +.+..+... |.||+|
T Consensus 196 ~Ndyn~~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~-------~~~-~~~~~~----~~l~~~a~~-G~pi~i 262 (347)
T 1xyz_A 196 YNDYNIEDLGPKSNAVFNMIKSMKERGVPIDGVGFQCHFINGM-------SPE-YLASID----QNIKRYAEI-GVIVSF 262 (347)
T ss_dssp EEESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC-------CHH-HHHHHH----HHHHHHHHT-TCEEEE
T ss_pred eccCccccccchHHHHHHHHHHHHHCCCCcceEEEeeecCCCC-------Cch-hHHHHH----HHHHHHHhc-CCceEE
Confidence 874211 1111 1111 1111234455555765321 111 012222 223334444 557999
Q ss_pred ecccccCCCCCcC---HHHHHHHHHHHHHHHcc--CCCcEEEEceecCCCCC
Q 013777 376 GEWTCEWNVKDAS---KQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHW 422 (436)
Q Consensus 376 GEwg~~~~~~~~~---~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~~~~W 422 (436)
+|++......... .+...++++..+.++-+ ...|-++|.+.. ...|
T Consensus 263 TEldi~~~~~~~~~~~~~~Qa~~y~~~~~~~~~~~~v~git~Wg~~D-~~sW 313 (347)
T 1xyz_A 263 TEIDIRIPQSENPATAFQVQANNYKELMKICLANPNCNTFVMWGFTD-KYTW 313 (347)
T ss_dssp EEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBT-TSCS
T ss_pred EeccccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcc-CCcc
Confidence 9998754211111 23344556666666543 458999999876 3455
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=7.7e-11 Score=120.93 Aligned_cols=140 Identities=16% Similarity=0.230 Sum_probs=104.0
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|++|+.+.|-.+ .|...+.+.+..++.++++|+.|.++||.+||+||+..-.+.
T Consensus 51 D~Yh~y--~eDi~lm~~~G~~~~R~sisWsRi-~P~G~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~----- 122 (468)
T 1pbg_A 51 DFYHKY--PVDLELAEEYGVNGIRISIAWSRI-FPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEA----- 122 (468)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHH-STTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHH-----
T ss_pred cccccC--HHHHHHHHHhCCCEEEeccCHhhh-ccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCccCHH-----
Confidence 566666 899999999999999999988654 454335677789999999999999999999999986522110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC--hh-------HHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA--LD-------TLKSYYK 289 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~--~~-------~~~~~~~ 289 (436)
......|. +...+.+.++.+.+++||++ |..|.++|||.. |+.. .. .+.....
T Consensus 123 --L~~~ggw~~r~~~~~F~~ya~~~~~~~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~~a~h~~llAha 197 (468)
T 1pbg_A 123 --LHSNGDFLNRENIEHFIDYAAFCFEEFPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHA 197 (468)
T ss_dssp --HHHTTGGGSTHHHHHHHHHHHHHHHHCTT---CCEEEEESCHHHHHHHHHTSCCSTTCCCSCHHHHHHHHHHHHHHHH
T ss_pred --HHhcCCCCChHHHHHHHHHHHHHHHHhCC---CCEEEEecCchhhhcccccccccCCcccccHHHHHHHHHHHHHHHH
Confidence 00011354 67889999999999999998 778999999973 1111 11 1222345
Q ss_pred HHHHHHHhhCCCeEE
Q 013777 290 AGYDAVRKYTSTAYV 304 (436)
Q Consensus 290 ~~~~aIR~~~p~~~V 304 (436)
.+++++|+..|+..|
T Consensus 198 ~Av~~~r~~~~~~~I 212 (468)
T 1pbg_A 198 RAVKLYKDKGYKGEI 212 (468)
T ss_dssp HHHHHHHHTTCSSEE
T ss_pred HHHHHHHhhCCCCeE
Confidence 788899998887554
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.10 E-value=9.1e-11 Score=102.75 Aligned_cols=73 Identities=22% Similarity=0.272 Sum_probs=65.6
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEEcC
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKD 82 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~ 82 (436)
.+|||||++..| .|+|++++++.||+|+|.+- +++++||+.||+||+++.. +.|.|++++++..|+|.|.-+.
T Consensus 79 ~~GkYLs~~~~G--~v~a~a~~~g~~E~F~l~~~-~G~~aLra~nG~yl~~~~~---g~l~a~a~~~~~~E~f~v~l~~ 151 (155)
T 2yug_A 79 GYGKYLGINSDG--LVVGRSDAIGPREQWEPVFQ-DGKMALLASNSCFIRCNEA---GDIEAKNKTAGEEEMIKIRSCA 151 (155)
T ss_dssp TTSCBEEECSSS--BEEECCSSCCTTTBEEEECS-TTCCEEEETTSCBEEECSS---SCEEECCSCCCTTTCCEEEECS
T ss_pred CCCCEEEecCCC--cEEeccCCCCCCCEEEEEEE-CCEEEEEeCCCCEEEEcCC---CcEEEecCCCCCCcEEEEEEec
Confidence 369999999987 89999999999999999998 8899999999999999873 3499999999999999986543
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.10 E-value=2.3e-09 Score=104.20 Aligned_cols=225 Identities=15% Similarity=0.198 Sum_probs=133.9
Q ss_pred HHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013777 161 EDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~ 238 (436)
.+.+.| ..+||.|++ .+.|. ..+|.++ .| .+..+|+++++|+++||+|....-. -.+|.+.+-...
T Consensus 30 ~~~~~~-~~~fn~vt~en~~kW~-~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlv-W~~q~P~W~~~~----- 97 (303)
T 1ta3_B 30 QNEAIV-ASQFGVITPENSMKWD-ALEPSQG-NF---GWSGADYLVDYATQHNKKVRGHTLV-WHSQLPSWVSSI----- 97 (303)
T ss_dssp HHHHHH-HHHCSEEEESSTTSHH-HHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEE-CSSSCCHHHHTC-----
T ss_pred HHHHHH-HhhCCEEEECccccHH-HhCCCCC-cc---CchHHHHHHHHHHHCCCEEEEeecc-ccCCCChhhhcC-----
Confidence 445555 679999998 67665 4455432 34 4688999999999999998764310 011211111000
Q ss_pred CCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC--hhHH-----HHHHHHHHHHHHhhCCCeEEEEeCCC
Q 013777 239 EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVIMSNRL 310 (436)
Q Consensus 239 ~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Viv~~~~ 310 (436)
-. +...+...++++.+++||++. |.+||+.|||...... ...| ..|.+.+++++|+.+|+..+++.+-.
T Consensus 98 -~~~~~~~~~~~~~i~~v~~rY~g~--v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a~L~~Ndyn 174 (303)
T 1ta3_B 98 -GDANTLRSVMTNHINEVVGRYKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKLYINDYN 174 (303)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESC
T ss_pred -CCHHHHHHHHHHHHHHHHHhcCCc--ceEEEeecCcccCCCCcccchHHHhccHHHHHHHHHHHHHHCCCCEEEecccc
Confidence 01 244678889999999999985 8889999999753211 1112 36889999999999999999987421
Q ss_pred -CCCC-h-----hhhhc----cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCC-eEEeecc
Q 013777 311 -GPAD-H-----KELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGP-LTFVGEW 378 (436)
Q Consensus 311 -~~~~-~-----~~~~~----~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p-~v~vGEw 378 (436)
.... . ..+.+ ...+.+.+-+..|...... +.+. +.. .+..+... |. ||+|+|+
T Consensus 175 ~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~------~~~~-~~~-------~l~~~a~~-G~~pi~iTEl 239 (303)
T 1ta3_B 175 LDSASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHW------SSTE-AAG-------ALSSLANT-GVSEVAITEL 239 (303)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTCC------CGGG-HHH-------HHHHHHTT-CCSEEEEEEE
T ss_pred ccCCchHHHHHHHHHHHHHHHCCCCcceEEEeeecCCCCC------CHHH-HHH-------HHHHHHHC-CCCeEEEeeC
Confidence 1111 0 11211 1123455666678764321 1121 211 22233333 54 7999999
Q ss_pred cccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecCCCCC
Q 013777 379 TCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHW 422 (436)
Q Consensus 379 g~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~~~W 422 (436)
+... ...+.++++++..++. ....|-++|.+.. ...|
T Consensus 240 di~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D-~~sW 276 (303)
T 1ta3_B 240 DIAG----AASSDYLNLLNACLNE--QKCVGITVWGVSD-KDSW 276 (303)
T ss_dssp EETT----CCHHHHHHHHHHHHTC--TTEEEEEESCSBG-GGST
T ss_pred CcCh----hHHHHHHHHHHHHHhC--CCceEEEEecCCc-CCCc
Confidence 8752 2334555555433221 2457899998876 3445
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.4e-10 Score=118.65 Aligned_cols=137 Identities=17% Similarity=0.206 Sum_probs=102.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++|++.||++|||+||+.+. |...+|.+ +.|+-+.++.++++++.|+++||+||+.+...- ++.+.+| +.+.
T Consensus 40 ~~dl~~mK~~G~N~Vrt~v~-W~~hEP~~-G~ydf~gl~~l~~fl~la~e~GL~VIl~~gpyi---~~ew~~g---G~P~ 111 (612)
T 3d3a_A 40 EHRIKMCKALGMNTICLYVF-WNFHEPEE-GRYDFAGQKDIAAFCRLAQENGMYVIVRPGPYV---CAEWEMG---GLPW 111 (612)
T ss_dssp HHHHHHHHHHTCCEEEEECC-HHHHCSST-TCCCCSGGGCHHHHHHHHHHTTCEEEEECCSCC---CTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEcCh-HHhcCCCC-CccChhHHHHHHHHHHHHHHCCCEEEEecCccc---ccccccC---CCch
Confidence 79999999999999999998 55667754 467777889999999999999999999864111 1111111 1111
Q ss_pred C------------ChhHHHHHHHHHHHHHHHhCC-----CCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhC-CC
Q 013777 240 W------------GDSNVADTVAVIDFLAARYAN-----RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYT-ST 301 (436)
Q Consensus 240 w------------~~~~~~~~~~~~~~lA~ry~~-----~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~-p~ 301 (436)
| .+...+.+.++++.|++||++ +|.|++|+|-||+..... -+.+.+.+.+.+|+.+ ++
T Consensus 112 Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~~~~~~n~p~II~wqIeNEyg~yg~----~~~y~~~l~~~l~~~g~~~ 187 (612)
T 3d3a_A 112 WLLKKKDIKLREQDPYYMERVKLFLNEVGKQLADLQISKGGNIIMVQVENEYGAFGI----DKPYISEIRDMVKQAGFTG 187 (612)
T ss_dssp GGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGTCC----CHHHHHHHHHHHHHHTCCS
T ss_pred hhccCCCceecCCCHHHHHHHHHHHHHHHHHHhhhhhccCCCEEEEeecccccccCc----hHHHHHHHHHHHHHcCCCc
Confidence 2 156778888999999999995 899999999999963111 2467778888999997 57
Q ss_pred eEEEEeC
Q 013777 302 AYVIMSN 308 (436)
Q Consensus 302 ~~Viv~~ 308 (436)
.+++..+
T Consensus 188 vp~~~~~ 194 (612)
T 3d3a_A 188 VPLFQCD 194 (612)
T ss_dssp SCEEEEE
T ss_pred hhheecc
Confidence 7666654
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=99.04 E-value=8.6e-09 Score=100.62 Aligned_cols=218 Identities=17% Similarity=0.248 Sum_probs=134.3
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGF 237 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~ 237 (436)
+.+++.|...+||.|++ .+.|. ..+|.++ .| .+..+|+++++|+++||+|.. |.. .+|+ ..
T Consensus 27 ~~~~~~~~~~~fn~vt~eN~~kW~-~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~g--htl------vW~~----q~ 89 (313)
T 1v0l_A 27 DSTYTSIAGREFNMVTAENEMKID-ATEPQRG-QF---NFSSADRVYNWAVQNGKQVRG--HTL------AWHS----QQ 89 (313)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSHH-HHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--EEE------ECSS----SC
T ss_pred CHHHHHHHHhcCCEEEECCcccHH-HhCCCCC-cc---CchHHHHHHHHHHHCCCEEEE--Eee------cCcC----cC
Confidence 46788888899999999 56664 4455432 33 468899999999999999854 322 0111 01
Q ss_pred CCCC-----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC----hhHH----HHHHHHHHHHHHhhCCCeEE
Q 013777 238 QEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----LDTL----KSYYKAGYDAVRKYTSTAYV 304 (436)
Q Consensus 238 ~~w~-----~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~----~~~~----~~~~~~~~~aIR~~~p~~~V 304 (436)
+.|- +...+...++++.+++||++. |..||+.|||.....+ ...+ ..|...+++++|+.+|+..+
T Consensus 90 P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~--i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~a~L 167 (313)
T 1v0l_A 90 PGWMQSLSGSALRQAMIDHINGVMAHYKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKL 167 (313)
T ss_dssp CHHHHTCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSEE
T ss_pred chhhhcCCHHHHHHHHHHHHHHHHHHcCCc--ceEEeeecccccCCCcccccCcHHHhhhHHHHHHHHHHHHhhCCCCEE
Confidence 2232 456778889999999999965 8889999999853211 1112 45889999999999999999
Q ss_pred EEeCCC-CCCC-h-----hhhh----ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeE
Q 013777 305 IMSNRL-GPAD-H-----KELL----SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT 373 (436)
Q Consensus 305 iv~~~~-~~~~-~-----~~~~----~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v 373 (436)
++.+-. .... . ..+. ....+.+-+-+..|+...+. +.++ +. +.+..+... +.||
T Consensus 168 ~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~------~~~~-~~-------~~l~~~a~~-G~pv 232 (313)
T 1v0l_A 168 CYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSP------YNSN-FR-------TTLQNFAAL-GVDV 232 (313)
T ss_dssp EEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTT-HH-------HHHHHHHTT-TCEE
T ss_pred EEeccccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCCCC------CHHH-HH-------HHHHHHHhc-CCeE
Confidence 987421 1101 1 1111 11123455666668653211 1111 11 112223333 5579
Q ss_pred EeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 374 FVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 374 ~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
+|+|++... ...+.++++++..++. ....|-++|.+..
T Consensus 233 ~iTEldi~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D 270 (313)
T 1v0l_A 233 AITELDIQG----APASTYANVTNDCLAV--SRCLGITVWGVRD 270 (313)
T ss_dssp EEEEEEETT----CCHHHHHHHHHHHHTC--TTEEEEEESCSBG
T ss_pred EEEeCCccH----HHHHHHHHHHHHHHhc--CCceEEEEECCCC
Confidence 999998752 2334555555543321 2457999998865
|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.5e-08 Score=104.73 Aligned_cols=119 Identities=15% Similarity=0.188 Sum_probs=87.4
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC---------------------------CCCccchHHHHHHHH
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP---------------------------KPFVGGSSKVLDNAF 204 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~---------------------------~~~~~~~l~~ld~~v 204 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+. |... ++..+..++..+++|
T Consensus 58 d~Yh~y--~eDi~l~~elG~~~yRfSIsWsRI~-P~G~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~~N~~Gl~fY~~li 134 (489)
T 1uwi_A 58 GYWGNY--KTFHNNAQKMGLKIARLNSEWSRQF-PNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIF 134 (489)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHHC-CSCCCCCTTCCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred chhhhH--HHHHHHHHHcCCCEEEEeCcHHHCC-CCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 366666 8999999999999999999996554 3210 223456899999999
Q ss_pred HHHHHcCCEEEEEcCCCCCCCCCCCC----CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 205 DWAEKYGVKVIVDLHAAPGSQNGNEH----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 205 ~~a~~~Gi~VilDlH~~pg~qng~~~----sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
+.|.++||..||+||+..--|.=.+. .|.......|. +..++.+.++.+.+.++|++.-.. |-.+|||.
T Consensus 135 d~Ll~~GIeP~VTL~H~DlP~~L~d~y~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgdrVk~--W~T~NEp~ 208 (489)
T 1uwi_A 135 KDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYTAWKFDDLVDE--YSTMNEPN 208 (489)
T ss_dssp HHHHHTTCEEEEESCCSCCBGGGBCHHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTTTCSE--EEEEECHH
T ss_pred HHHHHcCCcceEEeecCCccHHHHHhhhhcccccccCCCcCCHHHHHHHHHHHHHHHHHhCCccCe--EEEecCch
Confidence 99999999999999986432211000 00001123576 788999999999999999986443 55899995
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.03 E-value=6e-09 Score=116.38 Aligned_cols=119 Identities=22% Similarity=0.158 Sum_probs=85.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+.. . | + -++++++|.++||+||.++-.. .. ++.. +.......
T Consensus 352 ~~dl~lmK~~G~N~VR~~h-----y-p--~----------~~~fydlcDe~Gi~V~~E~~~~-~~--g~~~-~~w~~~~~ 409 (1024)
T 1yq2_A 352 REDLALMKRFNVNAIRTSH-----Y-P--P----------HPRLLDLADEMGFWVILECDLE-TH--GFEA-GGWVENPS 409 (1024)
T ss_dssp HHHHHHHHHTTCCEEEETT-----S-C--C----------CHHHHHHHHHHTCEEEEECSCB-CG--GGTT-TTTTTCGG
T ss_pred HHHHHHHHHcCCCEEEecC-----C-C--C----------CHHHHHHHHHCCCEEEEcCCcc-cC--Cccc-ccccccCC
Confidence 6899999999999999931 1 1 1 1567889999999999987210 00 0000 00000000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
-.+...+.+.+.++.+++|++++|+|++|.+.||+... .+.+++++.||+.||+++|...+
T Consensus 410 ~~p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpv~~~~ 470 (1024)
T 1yq2_A 410 DVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTG--------SNLAAMAAWAHARDSSRPVHYEG 470 (1024)
T ss_dssp GCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCeEEEEECCcCcchH--------HHHHHHHHHHHHhCCCceEEeCC
Confidence 01455677889999999999999999999999999741 35778899999999999987653
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1.1e-09 Score=113.83 Aligned_cols=114 Identities=16% Similarity=0.253 Sum_probs=84.9
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE--EEcCCCCCCCCCCCC-------
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI--VDLHAAPGSQNGNEH------- 230 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vi--lDlH~~pg~qng~~~------- 230 (436)
++|++.|+++|+|+||++| +|...+|..++.|+ ++.+|++|+.|+++||+|| |++|..+|......+
T Consensus 32 ~~dl~~mk~~Gln~Vr~~V-~W~~iEP~g~G~yd---f~~~d~~id~a~~~GL~viv~L~~h~c~g~~g~~~~~~lP~WL 107 (516)
T 1vem_A 32 ENDLRWAKQNGFYAITVDF-WWGDMEKNGDQQFD---FSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSWV 107 (516)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCCCBCCCGGG
T ss_pred HHHHHHHHHcCCCEEEEec-chhhccCCCCCccc---hHHHHHHHHHHHHCCCEEEEEecccccCCCcCCCCCCCCCHHH
Confidence 8999999999999999999 66677776345664 6788999999999999999 999865442111111
Q ss_pred --------------CCCCC--CCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeE----------------EEeecCCCCC
Q 013777 231 --------------SATRD--GFQEWG-DSNVADTVAVIDFLAARYANRPSLAA----------------IELINEPLAP 277 (436)
Q Consensus 231 --------------sg~~~--~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g----------------~eL~NEP~~~ 277 (436)
+|.+. +...|. ....+.+.++++.|++||++++.|++ +++-||...+
T Consensus 108 ~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r~~~~~~vI~eI~vglG~~GelryPs~qv~NE~g~~ 187 (516)
T 1vem_A 108 WNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRYPSYTTSDGTGYP 187 (516)
T ss_dssp GGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGBCCEEECCSGGGBSSCCCCCTTTTCCTT
T ss_pred HhcCCccceeeECCCCCCCcccccccccCccHHHHHHHHHHHHHHHccCCCEEEEeeccccccccccccccccccCcCCC
Confidence 11110 011133 44678888999999999999999998 8999997543
|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1e-08 Score=105.92 Aligned_cols=147 Identities=21% Similarity=0.289 Sum_probs=101.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC----------------------------CCCccchHHHHHHH
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP----------------------------KPFVGGSSKVLDNA 203 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~----------------------------~~~~~~~l~~ld~~ 203 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+. |... ++..+..++..+++
T Consensus 58 d~yh~y--~eDi~l~~~mG~~~yRfSIsWsRI~-P~G~~~~~~~~e~~gd~~~~~~~~~g~~~~~~~~~N~~Gl~fY~~l 134 (489)
T 4ha4_A 58 GYWGNY--RKFHDAAQAMGLTAARIGVEWSRIF-PRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYREM 134 (489)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHHC-SSCCTTSCCEEEEETTEEEEEECCHHHHHHHHHHSCHHHHHHHHHH
T ss_pred cHHHHH--HHHHHHHHHcCCCEEEeeccHHhcC-cCCCcccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence 356666 8999999999999999999996554 3221 11245689999999
Q ss_pred HHHHHHcCCEEEEEcCCCCCCCCCCCC----CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC--
Q 013777 204 FDWAEKYGVKVIVDLHAAPGSQNGNEH----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA-- 276 (436)
Q Consensus 204 v~~a~~~Gi~VilDlH~~pg~qng~~~----sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~-- 276 (436)
|+.|.++||..+|+||+..--|.=.+. .|.......|. +..++.+.++-+.+.+||++.-.. |-.+|||..
T Consensus 135 id~Ll~~GIeP~VTL~H~DlP~~L~d~~~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgdrVk~--W~T~NEp~~~~ 212 (489)
T 4ha4_A 135 FSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVRTVIEFAKFSAYVAWKLDDLVYM--YSTMNEPNVVW 212 (489)
T ss_dssp HHHHHHTTCEEEEESCSSCCBTTTBCHHHHHTTCTTSCBGGGSHHHHHHHHHHHHHHHHHHGGGCSE--EEEEECHHHHH
T ss_pred HHHHHHcCCeeeEeecCCCchHHHhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCccce--EEEeccchhhh
Confidence 999999999999999986432211110 00011234576 788999999999999999886433 568999952
Q ss_pred ------------CC-CChh-------HHHHHHHHHHHHHHhhCCCeE
Q 013777 277 ------------PG-VALD-------TLKSYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 277 ------------~~-~~~~-------~~~~~~~~~~~aIR~~~p~~~ 303 (436)
+. .+.. .+.....++++++|+..+..+
T Consensus 213 ~~gy~~~~~~~~p~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~~i 259 (489)
T 4ha4_A 213 GLGYAAVKSGFPPGYLCLECAGRAMKNLVQAHARAYDAVKAITKKPV 259 (489)
T ss_dssp HHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCE
T ss_pred cccccccccCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCce
Confidence 11 1111 122334567788898877654
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.01 E-value=3.2e-09 Score=108.50 Aligned_cols=217 Identities=16% Similarity=0.218 Sum_probs=133.6
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDG 236 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~-pg~qng~~~sg~~~~ 236 (436)
+++++.|...+||.|++ .+.|. ..+|.++ .| .+..+|+++++|+++||+|.. |.. -.+|.
T Consensus 27 ~~~~~~~~~~~fn~~t~en~~kw~-~~ep~~g-~~---~f~~~D~~~~~a~~~gi~v~g--htlvW~~q~---------- 89 (436)
T 2d1z_A 27 DSAYTTIASREFNMVTAENEMKID-ATEPQRG-QF---NFSAGDRVYNWAVQNGKQVRG--HTLAWHSQQ---------- 89 (436)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSHH-HHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--EEEECSTTC----------
T ss_pred CHHHHHHHHHhCCeeeeccccccc-cccCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--EEEEeCCCC----------
Confidence 46788888899999999 56654 4455442 33 468899999999999999754 332 01121
Q ss_pred CCCCC-----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC-------ChhHH-HHHHHHHHHHHHhhCCCeE
Q 013777 237 FQEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-------ALDTL-KSYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 237 ~~~w~-----~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~-------~~~~~-~~~~~~~~~aIR~~~p~~~ 303 (436)
+.|- +...++..++++.+++||++ .|..|++.|||..... ....+ ..|.+.+++++|+.+|+..
T Consensus 90 -P~W~~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~w~v~NE~~~~~~~g~~~~~~~~~~g~~~i~~af~~Ar~~dP~a~ 166 (436)
T 2d1z_A 90 -PGWMQSLSGSTLRQAMIDHINGVMGHYKG--KIAQWDVVSHAFSDDGSGGRRDSNLQRTGNDWIEVAFRTARAADPAAK 166 (436)
T ss_dssp -CHHHHTCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEESCBCSSSSCCBCCCTTGGGCTTHHHHHHHHHHHHCTTSE
T ss_pred -chhhhcCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEeecccccCCCCccccCchhhhcchHHHHHHHHHHHhhCCCCE
Confidence 2232 45677888999999999996 7888999999975321 11122 4789999999999999999
Q ss_pred EEEeCCCC-CCC-h---------hhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCe
Q 013777 304 VIMSNRLG-PAD-H---------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPL 372 (436)
Q Consensus 304 Viv~~~~~-~~~-~---------~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~ 372 (436)
|++.+-.- ... . ..+.....+.+-+-+..|+...+ . +++. +. +.+..+.+. +.|
T Consensus 167 l~~Ndyn~~~~~~~k~~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~----~--~~~~-~~-------~~l~~~a~~-g~~ 231 (436)
T 2d1z_A 167 LCYNDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCVGFQSHFNSGS----P--YNSN-FR-------TTLQNFAAL-GVD 231 (436)
T ss_dssp EEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTB----C--CCTT-HH-------HHHHHHHTT-TCE
T ss_pred EEEeccccccCChhHHHHHHHHHHHHHhCCCcccEEEEeeEEcCCC----C--CHHH-HH-------HHHHHHHHc-CCe
Confidence 98864211 101 0 11111112345555666754221 1 1111 11 112223333 567
Q ss_pred EEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 373 TFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 373 v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
|+|+|++... ...+.++++++..++. ....|-++|.+..
T Consensus 232 v~iTEldv~~----~qa~~y~~~~~~~~~~--~~~~gvt~Wg~~d 270 (436)
T 2d1z_A 232 VAITELDIQG----ASSSTYAAVTNDCLAV--SRCLGITVWGVRD 270 (436)
T ss_dssp EEEEEEEETT----CCHHHHHHHHHHHHTC--TTEEEEEESCSBG
T ss_pred EEEeecchhH----HHHHHHHHHHHHHHhc--CCceEEEeccccC
Confidence 9999998752 2344555555543321 1357899998754
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=98.99 E-value=7.6e-09 Score=102.81 Aligned_cols=230 Identities=13% Similarity=0.128 Sum_probs=135.6
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATR 234 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qng~~~sg~~ 234 (436)
.++.+.+ ..+||.|++ .+.|. ..+|.+ +.| .+..+|++|++|+++||+|+... |. |.+.+-....
T Consensus 29 ~~~~~l~-~~~fn~vt~en~~kW~-~~ep~~-g~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~----q~P~W~~~~~ 98 (356)
T 2dep_A 29 GQIAELY-KKHVNMLVAENAMKPA-SLQPTE-GNF---QWADADRIVQFAKENGMELRFHTLVWHN----QTPDWFFLDK 98 (356)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSHH-HHCSBT-TBC---CCHHHHHHHHHHHHTTCEEEEEEEEESS----SCCGGGGBCT
T ss_pred HHHHHHH-HhhCCEEEECCcccHH-HhcCCC-Ccc---CchHHHHHHHHHHHCCCEEEEeeccccc----cCchhhhccC
Confidence 3456666 679999999 66654 445543 234 46889999999999999997643 43 2222221101
Q ss_pred CCCC----------CCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChhHH-----HHHHHHHHHH
Q 013777 235 DGFQ----------EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDA 294 (436)
Q Consensus 235 ~~~~----------~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~----~~~~~-----~~~~~~~~~a 294 (436)
++.. ... +...++..++++.+++||++ .|..||+.|||..... ....| ..|.+.++++
T Consensus 99 ~g~~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~~~g~~r~s~~~~~~G~~~i~~af~~ 176 (356)
T 2dep_A 99 EGKPMVEETDPQKREENRKLLLQRLENYIRAVVLRYKD--DIKSWDVVNEVIEPNDPGGMRNSPWYQITGTEYIEVAFRA 176 (356)
T ss_dssp TSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEECCBCTTSGGGBCCCHHHHHHTTHHHHHHHHH
T ss_pred cCCccccccccccCCCCHHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCCCCCccCChHHHhccHHHHHHHHHH
Confidence 1110 111 34567788999999999998 6889999999985321 00122 3688999999
Q ss_pred HHh-hCCCeEEEEeCCCCCCCh------hhhh----ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHH
Q 013777 295 VRK-YTSTAYVIMSNRLGPADH------KELL----SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLG 363 (436)
Q Consensus 295 IR~-~~p~~~Viv~~~~~~~~~------~~~~----~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~ 363 (436)
+|+ .+|+..+++.+- ..... ..+. ....+.+.+-+..|....+ .+.+ .+.. .+.
T Consensus 177 Ar~~~dP~a~L~~Ndy-n~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~------p~~~----~~~~----~l~ 241 (356)
T 2dep_A 177 TREAGGSDIKLYINDY-NTDDPVKRDILYELVKNLLEKGVPIDGVGHQTHIDIYN------PPVE----RIIE----SIK 241 (356)
T ss_dssp HHHHHCSSSEEEEEES-CTTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SCHH----HHHH----HHH
T ss_pred HHHhcCCCcEEEeccc-cccCcchHHHHHHHHHHHHHCCCCccEEEeeeeecCCC------CCHH----HHHH----HHH
Confidence 999 999999998752 11111 1111 1112234455555864211 1222 2222 223
Q ss_pred HhhhcCCCeEEeecccccCCCC--------CcC---HHHHHHHHHHHHHHHcc---CCCcEEEEceec
Q 013777 364 AVTTSNGPLTFVGEWTCEWNVK--------DAS---KQDYQRFANAQLDVYGR---ATFGWAYWAHKC 417 (436)
Q Consensus 364 ~~~~~~~p~v~vGEwg~~~~~~--------~~~---~~~~~~~~~~q~~~~~~---~~~Gw~~W~~k~ 417 (436)
.+... |.+|+|+|++...... ..+ .+...++++..++++.+ ...|-++|.+..
T Consensus 242 ~~a~~-Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~gvt~Wg~~D 308 (356)
T 2dep_A 242 KFAGL-GLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAKRYQELFDALKENKDIVSAVVFWGISD 308 (356)
T ss_dssp HHHTT-TCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHHHHHHHHHHHHHHTTGGGEEEEEESCSBT
T ss_pred HHHhC-CCeEEEeeceecCCCccccccccCCCCHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEecCcc
Confidence 33333 5579999998653211 111 12334455555666543 244889998876
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=98.99 E-value=9.4e-09 Score=99.98 Aligned_cols=217 Identities=18% Similarity=0.268 Sum_probs=132.2
Q ss_pred HHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 162 DFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 162 d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+.+.+ ..+||.|++ .+.|. ..+|.++ .| .+..+|+++++|+++||+|....-. -.+|. +.
T Consensus 32 ~~~~~-~~~fn~vt~en~~kW~-~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtl~-W~~q~-----------P~ 93 (303)
T 1i1w_A 32 NAAII-QANFGQVTPENSMKWD-ATEPSQG-NF---NFAGADYLVNWAQQNGKLIRGHTLV-WHSQL-----------PS 93 (303)
T ss_dssp HHHHH-HHHCSEEEESSTTSHH-HHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEE-CSTTC-----------CH
T ss_pred HHHHH-HhhCCEEEECccccHH-HhCCCCC-cc---ChhhHHHHHHHHHHCCCEEEEeecc-ccCCC-----------Ch
Confidence 44445 779999998 66654 4455442 34 4688999999999999998653210 01121 22
Q ss_pred CC------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC--hhHH-----HHHHHHHHHHHHhhCCCeEEEE
Q 013777 240 WG------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVIM 306 (436)
Q Consensus 240 w~------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Viv 306 (436)
|- +...+...++++.+++||++. |.+||+.|||...... ...| ..|.+.+++++|+.+|+..+++
T Consensus 94 W~~~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~L~~ 171 (303)
T 1i1w_A 94 WVSSITDKNTLTNVMKNHITTLMTRYKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYI 171 (303)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEE
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhcCCc--eeEEEeecCccCCCCCcccchHHHhcCHHHHHHHHHHHHHHCCCCeEEe
Confidence 32 235678889999999999985 8899999999753210 1122 3578999999999999999988
Q ss_pred eCC-CCCCC-h-----hhhhc----cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCC-eEE
Q 013777 307 SNR-LGPAD-H-----KELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGP-LTF 374 (436)
Q Consensus 307 ~~~-~~~~~-~-----~~~~~----~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p-~v~ 374 (436)
.+- ..... . ..+.. ...+.+.+-+..|.... .+ ..+. +.+..+... |. ||+
T Consensus 172 Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~--------~~----~~~~----~~l~~~a~~-G~~pi~ 234 (303)
T 1i1w_A 172 NDYNLDSASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAG--------QG----ASVL----QALPLLASA-GTPEVA 234 (303)
T ss_dssp EESSCCCSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTT--------TH----HHHH----HHHHHHHTT-CCSEEE
T ss_pred ccccccCCChHHHHHHHHHHHHHHHCCCcccEEEeccccCCC--------CH----HHHH----HHHHHHHHC-CCCeEE
Confidence 742 11111 1 11111 11223455555676432 11 2222 223334434 54 799
Q ss_pred eecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecCCCCC
Q 013777 375 VGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHW 422 (436)
Q Consensus 375 vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~~~W 422 (436)
|+|++... ...+.++++++..++. ....|-++|.+... ..|
T Consensus 235 iTEldi~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D~-~sW 275 (303)
T 1i1w_A 235 ITELDVAG----ASSTDYVNVVNACLNV--SSCVGITVWGVADP-DSW 275 (303)
T ss_dssp EEEEEETT----CCHHHHHHHHHHHHHC--TTEEEEEESCSBGG-GST
T ss_pred EEeCCccc----hHHHHHHHHHHHHHhC--CCceEEEEEcCCCC-CCc
Confidence 99998752 2345566665544331 24579999998763 445
|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=112.63 Aligned_cols=113 Identities=16% Similarity=0.243 Sum_probs=89.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||+.| ++|++.|+++|+|++|+.+.|-.+ .|.+. +.+++..++.+|++|+.+.++||.+||+||+..--+.
T Consensus 75 D~Y~~~--~eDi~lm~~~G~~~~R~sisWsRi-~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~--- 148 (512)
T 1v08_A 75 NSYHMY--KTDVRLLKEMGMDAYRFSISWPRI-LPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQA--- 148 (512)
T ss_dssp CHHHHH--HHHHHHHHHTTCSEEEEECCHHHH-STTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---
T ss_pred chHHHH--HHHHHHHHHhCCCeEecccCHhhh-CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHH---
Confidence 567666 899999999999999999987544 55542 5678889999999999999999999999976421110
Q ss_pred CCCCCCCCCCCC-h---hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-D---SNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~---~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
- .+.+..|. + ...+.+.++.+.+++||++. |..|.++|||.
T Consensus 149 L---~~~yggw~~r~~c~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 193 (512)
T 1v08_A 149 L---EEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDK--VKNWLTFNDPQ 193 (512)
T ss_dssp H---HHHHCGGGCTTSSHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred H---HhhCCCCCCccccchHHHHHHHHHHHHHHhCCc--ceEEEEcccch
Confidence 0 00012344 4 78899999999999999987 78899999997
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=98.96 E-value=3.6e-08 Score=96.99 Aligned_cols=229 Identities=10% Similarity=0.106 Sum_probs=134.7
Q ss_pred HHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCCCCCCCCCC
Q 013777 161 EDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATRD 235 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qng~~~sg~~~ 235 (436)
++.+.+ ..+||.|++ .+.|. ..+|.+ +.| .+..+|+++++|+++||+|.... |.. .+.+-.....
T Consensus 29 ~~~~~~-~~~fn~vt~eN~~kW~-~~ep~~-g~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q----~P~W~~~~~~ 98 (331)
T 1n82_A 29 MQKQLL-IDHVNSITAENHMKFE-HLQPEE-GKF---TFQEADRIVDFACSHRMAVRGHTLVWHNQ----TPDWVFQDGQ 98 (331)
T ss_dssp HTHHHH-HHHCSEEEESSTTSHH-HHCSBT-TBC---CCHHHHHHHHHHHHTTCEEEEEEEEESSS----CCGGGGBCSS
T ss_pred HHHHHH-HhcCCEEEECCcccHH-HhCCCC-Ccc---ChHHHHHHHHHHHHCCCEEEEEeeecCCC----CChhhccCCC
Confidence 345556 569999999 66664 445543 234 46889999999999999997532 532 2222211011
Q ss_pred CCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC----hhHH-----HHHHHHHHHHHHhhCCCeEEE
Q 013777 236 GFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----LDTL-----KSYYKAGYDAVRKYTSTAYVI 305 (436)
Q Consensus 236 ~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~----~~~~-----~~~~~~~~~aIR~~~p~~~Vi 305 (436)
+. ... +...+...++++.+++||++ .|.+|++.|||...... ...| ..|.+.+++++|+.+|+..++
T Consensus 99 g~-~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~g~~~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~L~ 175 (331)
T 1n82_A 99 GH-FVSRDVLLERMKCHISTVVRRYKG--KIYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDALLF 175 (331)
T ss_dssp SS-BCCHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEE
T ss_pred CC-CCCHHHHHHHHHHHHHHHHHHhcC--CceEEeeecccccCCCccccccchHHHhcCHHHHHHHHHHHHHHCCCCEEE
Confidence 11 122 46678888999999999998 68899999999853211 1122 358899999999999999998
Q ss_pred EeCCCCCCCh------hhhh----ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEe
Q 013777 306 MSNRLGPADH------KELL----SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 375 (436)
Q Consensus 306 v~~~~~~~~~------~~~~----~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~v 375 (436)
+.+- ....+ ..+. ....+.+.+-+..|.-..+ .+.+ .+.. .+..+... +.||+|
T Consensus 176 ~Ndy-n~~~~~k~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~------~~~~----~~~~----~l~~~a~~-G~pi~i 239 (331)
T 1n82_A 176 YNDY-NECFPEKREKIFALVKSLRDKGIPIHGIGMQAHWSLTR------PSLD----EIRA----AIERYASL-GVVLHI 239 (331)
T ss_dssp EEES-STTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSS------SCHH----HHHH----HHHHHHTT-TCEEEE
T ss_pred Eecc-cCCCchhHHHHHHHHHHHHHCCCccceEEeceecCCCC------CCHH----HHHH----HHHHHHhc-CCeEEE
Confidence 8642 11111 1111 1112234555556753211 1122 2221 22233333 557999
Q ss_pred ecccccCCCC--------CcC---HHHHHHHHHHHHHHHccC-C-Cc-EEEEceecC
Q 013777 376 GEWTCEWNVK--------DAS---KQDYQRFANAQLDVYGRA-T-FG-WAYWAHKCE 418 (436)
Q Consensus 376 GEwg~~~~~~--------~~~---~~~~~~~~~~q~~~~~~~-~-~G-w~~W~~k~~ 418 (436)
+|++...... ..+ .+...++++..+.++-+. . ++ -++|.+...
T Consensus 240 TEldi~~~~~~~~~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~v~git~Wg~~D~ 296 (331)
T 1n82_A 240 TELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALFKEYRDVIQSVTFWGIADD 296 (331)
T ss_dssp EEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBTT
T ss_pred EeceecCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHhCcCcccEEEEECCCCC
Confidence 9998653210 011 233445556655554332 2 44 899988763
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=98.95 E-value=9.2e-09 Score=114.88 Aligned_cols=116 Identities=18% Similarity=0.168 Sum_probs=84.9
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+.. . | +. ++++++|.++||+||.++-.... ++... ....
T Consensus 373 ~~dl~lmK~~g~N~vR~~h-----y-p--~~----------~~~~dlcDe~Gi~V~~E~~~~~~---g~~~~----~~~~ 427 (1023)
T 1jz7_A 373 VQDILLMKQNNFNAVRCSH-----Y-P--NH----------PLWYTLCDRYGLYVVDEANIETH---GMVPM----NRLT 427 (1023)
T ss_dssp HHHHHHHHHTTCCEEECTT-----S-C--CC----------HHHHHHHHHHTCEEEEECSCBCT---TSSST----TTTT
T ss_pred HHHHHHHHHcCCCEEEecC-----C-C--CC----------HHHHHHHHHCCCEEEECCCcccC---Ccccc----CcCC
Confidence 6789999999999999831 1 1 11 36789999999999998732100 01000 0000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
-.+...+.+.+.++.+++|++++|+|++|.+.||+... ...+++++.||+.||+++|..+.
T Consensus 428 ~~p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~~--------~~~~~l~~~ik~~DptRpv~~~~ 488 (1023)
T 1jz7_A 428 DDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEG 488 (1023)
T ss_dssp TCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEEEEEECccCCcch--------HHHHHHHHHHHHhCCCCeEEecC
Confidence 01455677888999999999999999999999999741 34678899999999999987653
|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-09 Score=111.80 Aligned_cols=112 Identities=15% Similarity=0.187 Sum_probs=88.9
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC-CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP-KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~-~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
+||+.| ++|++.|+++|+|++|+.+.|-.+ .|.+. +.++...++.+|++|+.|.++||.+||+|++..--+.-
T Consensus 56 D~Y~~~--~eDi~lm~~~G~~~~R~sisWsRi-~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL~H~d~P~~L--- 129 (464)
T 1wcg_A 56 DSYHKY--KEDVAIIKDLNLKFYRFSISWARI-APSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYL--- 129 (464)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-STTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH---
T ss_pred chHHhh--HHHHHHHHHhCCCeEEecccHHHh-CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCcch---
Confidence 567666 899999999999999999987644 45543 57778899999999999999999999999764211100
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 231 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 231 sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.....|. +...+.+.++.+.+++||++. |..|.++|||.
T Consensus 130 ----~~~ggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 169 (464)
T 1wcg_A 130 ----QDLGGWVNPIMSDYFKEYARVLFTYFGDR--VKWWITFNEPI 169 (464)
T ss_dssp ----HHTTGGGSTTHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ----hhcCCCCChhHHHHHHHHHHHHHHHhCCc--CcEEEEccccc
Confidence 0012354 678899999999999999986 77799999996
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=98.90 E-value=1.6e-08 Score=104.52 Aligned_cols=230 Identities=13% Similarity=0.166 Sum_probs=138.0
Q ss_pred HHHHHHHHhCCCCEEEec--CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATR 234 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRip--v~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qng~~~sg~~ 234 (436)
+++.+.| ..+||.|++. +.|. ..+|.++ .| .+..+|+++++|+++||+|.... |. + .|.+.+-.. .
T Consensus 195 ~~~~~l~-~~~FN~vT~eNemKW~-~iEP~~G-~~---~f~~~D~ivd~a~~nGi~VrgHtLvWhs-~-~q~P~Wv~~-~ 265 (530)
T 1us2_A 195 SREQAVV-KKHFNHLTAGNIMKMS-YMQPTEG-NF---NFTNADAFVDWATENNMTVHGHALVWHS-D-YQVPNFMKN-W 265 (530)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSHH-HHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECCC-G-GGSCHHHHT-C
T ss_pred HHHHHHH-HhhCCeEEECCcccHH-HhcCCCC-cc---CchHHHHHHHHHHHCCCEEEEecccccc-c-ccCchHHhc-C
Confidence 3566666 6799999995 5554 4455432 34 46889999999999999987532 22 0 011111110 0
Q ss_pred CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----C--hhHHH-------HHHHHHHHHHHhhCC
Q 013777 235 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----A--LDTLK-------SYYKAGYDAVRKYTS 300 (436)
Q Consensus 235 ~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~----~--~~~~~-------~~~~~~~~aIR~~~p 300 (436)
.+ . +...++..++++.+++||++++.|..|++.|||..... . ...|. .|...+++++|+.+|
T Consensus 266 ~G----s~~~l~~~~~~~I~~vv~rYk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w~~~lG~~~d~i~~AF~~Ar~aDP 341 (530)
T 1us2_A 266 AG----SAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADP 341 (530)
T ss_dssp CS----CHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEESCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCT
T ss_pred CC----CHHHHHHHHHHHHHHHHHHhCCCCceEEEEeecCcccCCccccccccCCHHHHHhCcHHHHHHHHHHHHHHHCC
Confidence 00 2 35677888999999999998889999999999985321 0 12221 799999999999999
Q ss_pred CeEEEEeCCCCCC-C-----hhhhh----ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCC
Q 013777 301 TAYVIMSNRLGPA-D-----HKELL----SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG 370 (436)
Q Consensus 301 ~~~Viv~~~~~~~-~-----~~~~~----~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 370 (436)
+..+++.+-.-.. . ...+. ....+.+-+-+..|....+ .+.+ .+.. .+..+... +
T Consensus 342 ~AkL~~NDYn~~~~~~k~~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~------p~~~----~i~~----~L~~~a~l-G 406 (530)
T 1us2_A 342 AVILYYNDYNIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNY------PSIA----NISA----AMKKVVDL-G 406 (530)
T ss_dssp TSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SCHH----HHHH----HHHHHHTT-T
T ss_pred CCEEEecccccccccchhHHHHHHHHHHHHCCCceeEEEEeeecCCCC------CCHH----HHHH----HHHHHHhc-C
Confidence 9999886421101 1 11111 1112345566666864321 1122 2222 22333333 5
Q ss_pred CeEEeecccccCCC-----------CCcC---HHHHHHHHHHHHHHH--c---cCCCcEEEEceec
Q 013777 371 PLTFVGEWTCEWNV-----------KDAS---KQDYQRFANAQLDVY--G---RATFGWAYWAHKC 417 (436)
Q Consensus 371 p~v~vGEwg~~~~~-----------~~~~---~~~~~~~~~~q~~~~--~---~~~~Gw~~W~~k~ 417 (436)
.||.|+|+...... ...+ .+...++++..++++ . ....|-++|.+..
T Consensus 407 lpI~ITElDv~~~~~~~~~~~~~~~~~~t~~~~~~QA~~y~~~~~~~l~~~~~~~v~GIT~WG~~D 472 (530)
T 1us2_A 407 LLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTD 472 (530)
T ss_dssp CEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSBG
T ss_pred CeEEEEeCccCCCcccccccccccccCCChHHHHHHHHHHHHHHHHHhhhccCCceEEEEEEcCcC
Confidence 56999999764321 0111 223345555556666 2 2457899998876
|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.5e-09 Score=111.24 Aligned_cols=112 Identities=19% Similarity=0.226 Sum_probs=88.7
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
+||+.| ++|++.|+++|+|++|+.+.|-.+ .|.+ .+.++...++.+|++|+.|.++||.+||+|++..--+. -
T Consensus 54 D~Y~~~--~eDi~lm~~~G~~~~R~sisWsRi-~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~---l 127 (469)
T 2e9l_A 54 GSYTLW--EEDLKCIKQLGLTHYRFSLSWSRL-LPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQT---L 127 (469)
T ss_dssp CTTTCH--HHHHHHHHHHTCSEEEEECCHHHH-STTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---H
T ss_pred cHHHHH--HHHHHHHHHhCCCeEEccccHhhc-ccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCcc---h
Confidence 577777 899999999999999999987644 4544 35677789999999999999999999999965421110 0
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 231 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 231 sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.....|. +...+.+.++.+.+++||++. |..|.++|||.
T Consensus 128 ----~~~ggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 167 (469)
T 2e9l_A 128 ----EDQGGWLSEAIIESFDKYAQFCFSTFGDR--VKQWITINEAN 167 (469)
T ss_dssp ----HHTTGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEESCHH
T ss_pred ----hhcCCCCCchHHHHHHHHHHHHHHHhcCc--CCEEEEccCcc
Confidence 0001354 678899999999999999986 77799999997
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=98.88 E-value=3.6e-09 Score=108.70 Aligned_cols=113 Identities=18% Similarity=0.263 Sum_probs=88.7
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCC-CCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPT-PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~-~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
+||..| ++|++.|+++|+|++|+.|.|-.+ .|. ..+.+++..++.+|++|+.|.++||.+||+||+..--|.-
T Consensus 52 D~Yhry--~eDi~lm~~lG~~~~Rfsi~W~Ri-~P~~G~g~~n~~G~~~Y~~lid~l~~~gI~p~vtL~H~dlP~~L--- 125 (479)
T 4b3l_A 52 DAYHQI--ESDLTLLASLGHNSYRTSIQWTRL-IDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFDLPIAL--- 125 (479)
T ss_dssp CHHHHH--HHHHHHHHTTTCCEEEEECCHHHH-BSCTTTTCBCHHHHHHHHHHHHHHHHHTCEEEEESCSSCCBHHH---
T ss_pred chHHHH--HHHHHHHHHcCCCEEEeecCHHHh-ccCCCCCCcCHHHHHHHHHHHHHHHHCCCEeeEEecCCCcCHHH---
Confidence 566666 899999999999999999988654 455 3456777899999999999999999999999975321100
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 231 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 231 sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+.+..|. +..++.+.++.+.+++||++. |--|-.+|||.
T Consensus 126 ---~~~yGGW~nr~~vd~F~~YA~~~f~~fgdr--Vk~WiT~NEp~ 166 (479)
T 4b3l_A 126 ---YQAYGGWESKHVVDLFVAFSKVCFEQFGDR--VKDWFVHNEPM 166 (479)
T ss_dssp ---HHHHCGGGCHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ---HHhcCCcCCHHHHHHHHHHHHHHHHHhCcc--CCeEEEccCcc
Confidence 00012465 688899999999999999985 44477999997
|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=2.9e-09 Score=109.67 Aligned_cols=113 Identities=19% Similarity=0.299 Sum_probs=88.5
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|++|+.|.|-.+ .|.+.+.+++..++..+++|+.|.++||.+||+||+..--|.-
T Consensus 67 D~YhrY--~eDi~lm~elG~~~yRfsI~WsRI-~P~g~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L---- 139 (488)
T 3gnp_A 67 DQYHRF--EEDIQLMADMGMDAYRFSIAWSRI-YPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQAL---- 139 (488)
T ss_dssp CHHHHH--HHHHHHHHHHTCCEEEEECCHHHH-CTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH----
T ss_pred chhhhH--HHHHHHHHHcCCCEEEecccHHHe-eeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCCCCCCHHH----
Confidence 566666 899999999999999999998654 4554356778899999999999999999999999975321100
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+....|. +..++.+.++.+.+++||++. |--|-.+|||.
T Consensus 140 --~~~yGGW~n~~~v~~F~~Ya~~~~~~fgd~--Vk~W~T~NEp~ 180 (488)
T 3gnp_A 140 --EDKYKGWLDRQIVDDFAAYAETCFREFGDR--VKHWITLNEPH 180 (488)
T ss_dssp --HHHHCGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred --HHHhCCCCCHHHHHHHHHHHHHHHHHhCCC--CCEEEEccCcc
Confidence 00012354 678899999999999999984 44577999996
|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=3e-09 Score=110.82 Aligned_cols=113 Identities=16% Similarity=0.212 Sum_probs=89.2
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|++|+.|.|-.+ .|.+.+.+++..++.+|++|+.|.++||.+||+|++..--+. -
T Consensus 125 D~Y~~y--~eDi~lm~~lG~~~~RfsIsWsRI-~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL~H~d~P~~---L- 197 (565)
T 2dga_A 125 NSYHLY--EEDVKALKDMGMKVYRFSISWSRI-LPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQA---L- 197 (565)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-CTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---H-
T ss_pred chHHHH--HHHHHHHHHhCCCeEEecccHHHh-ccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCcHH---H-
Confidence 577766 899999999999999999987644 555435778889999999999999999999999975421110 0
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+.+..|. +...+.+.++.+.+++||++. |..|.++|||.
T Consensus 198 --~~~yggw~~r~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~ 238 (565)
T 2dga_A 198 --EDKYGGFLNRQIVDDYKQFAEVCFKNFGDR--VKNWFTFNEPH 238 (565)
T ss_dssp --HHHHCGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred --HHhcCCCCCchHHHHHHHHHHHHHHHhCCC--CceEEEeccch
Confidence 00012454 578899999999999999986 77799999997
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=7.2e-09 Score=114.23 Aligned_cols=144 Identities=19% Similarity=0.198 Sum_probs=95.6
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.|+++|+|+||+ |-... .+ + +.++++|.++||+|+.|++...+ ..+
T Consensus 355 ~~~l~~~k~~g~N~iR~----wgg~~-y~--~---------~~~~d~cD~~GilV~~e~~~~~~------------~~~- 405 (848)
T 2je8_A 355 QTLFRDMKEANMNMVRI----WGGGT-YE--N---------NLFYDLADENGILVWQDFMFACT------------PYP- 405 (848)
T ss_dssp HHHHHHHHHTTCCEEEE----CTTSC-CC--C---------HHHHHHHHHHTCEEEEECSCBSS------------CCC-
T ss_pred HHHHHHHHHcCCcEEEe----CCCcc-CC--C---------HHHHHHHHHcCCEEEECcccccC------------CCC-
Confidence 57899999999999999 21000 01 1 46889999999999999863210 000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----C----CCh---hH-HH----HHHHHHHHHHHhhCCCeE
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----G----VAL---DT-LK----SYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~----~----~~~---~~-~~----~~~~~~~~aIR~~~p~~~ 303 (436)
..+...+.+.+.++.+++|++++|+|++|.+.|||... + .+. +. +. .|.+.+.+.||+.||+++
T Consensus 406 ~~~~~~~~~~~~~~~~v~r~~nHPSii~W~~~NE~~~~~~~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk~~Dptr~ 485 (848)
T 2je8_A 406 SDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRF 485 (848)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEEccCCCcccccccccccccCccchhhhHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 11466777889999999999999999999999999421 0 011 11 11 145678899999999999
Q ss_pred EEEeCCCCCCChhhhhccCCCCCcEEEEEeecCcCC
Q 013777 304 VIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFS 339 (436)
Q Consensus 304 Viv~~~~~~~~~~~~~~~~~~~~nvv~~~H~Y~~~~ 339 (436)
++.+..+.. .... +...++-+.|+|..|.
T Consensus 486 v~~~S~~~g-~~~~------~~~~~~gd~hy~~~w~ 514 (848)
T 2je8_A 486 YVHSSPYLA-NWGR------PESWGTGDSHNWGVWY 514 (848)
T ss_dssp EESSBSSSC-CTTC------GGGTTBSCEECCTTTT
T ss_pred EEecCCCCC-CCCC------CCCCCCCCccccCccc
Confidence 877643321 1110 1112334689887653
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=2.4e-09 Score=118.04 Aligned_cols=141 Identities=20% Similarity=0.193 Sum_probs=105.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+++++.||++|||+||+.|. |...+|.+ +.|+=.....||++|+.|+++||+|||-.= | ..++.+..| +.+.
T Consensus 39 ~d~l~kmka~G~NtV~~yvf-W~~hEP~~-G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G--P-yi~aE~~~G---G~P~ 110 (971)
T 1tg7_A 39 IDIFEKVKALGFNCVSFYVD-WALLEGNP-GHYSAEGIFDLQPFFDAAKEAGIYLLARPG--P-YINAEVSGG---GFPG 110 (971)
T ss_dssp HHHHHHHHTTTCCEEEEECC-HHHHCSBT-TBCCCCGGGCSHHHHHHHHHHTCEEEEECC--S-CCCTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEecc-HHHhCCCC-CeecccchHHHHHHHHHHHHcCCEEEEecC--C-cccceecCC---Ccce
Confidence 79999999999999999998 55667765 456544555699999999999999999531 1 111112111 1222
Q ss_pred CC-----------hhHHHHHHHHHHHHHHHhCCCC-----ceeEEEeecCCCCCCCC--hhHHHHHHHHHHHHHHhhCCC
Q 013777 240 WG-----------DSNVADTVAVIDFLAARYANRP-----SLAAIELINEPLAPGVA--LDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 240 w~-----------~~~~~~~~~~~~~lA~ry~~~~-----~v~g~eL~NEP~~~~~~--~~~~~~~~~~~~~aIR~~~p~ 301 (436)
|- +.+.++..++++.|++++++++ .|+++++-||....... .+..++|++...+++|+.+++
T Consensus 111 WL~~~p~~lR~~~p~y~~~~~~~~~~l~~~~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~ 190 (971)
T 1tg7_A 111 WLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIV 190 (971)
T ss_dssp GGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCC
T ss_pred eecccCCEecCCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCEEEEecccccCcccccccchhHHHHHHHHHHHHHHhCCC
Confidence 22 5678888899999999999776 89999999998532100 124789999999999999999
Q ss_pred eEEEEeC
Q 013777 302 AYVIMSN 308 (436)
Q Consensus 302 ~~Viv~~ 308 (436)
.+++...
T Consensus 191 vPl~tn~ 197 (971)
T 1tg7_A 191 VPFISND 197 (971)
T ss_dssp SCBBCCB
T ss_pred eeEEEec
Confidence 8888764
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-07 Score=94.52 Aligned_cols=136 Identities=16% Similarity=0.215 Sum_probs=94.6
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEE-c--CCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD-L--HAAPGSQNGNEHSATR 234 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilD-l--H~~pg~qng~~~sg~~ 234 (436)
+++.+.+ ..+||.||+ .+.|. ..+|.+ +.| .+..+|+++++|+++||+|... | |. |.+.+-....
T Consensus 51 ~~~~~l~-~~~fn~vt~eN~~kW~-~~ep~~-G~~---~f~~~D~~v~~a~~~gi~vrgHtlvW~~----q~P~W~~~d~ 120 (378)
T 1ur1_A 51 ERLNTLI-AKEFNSITPENCMKWG-VLRDAQ-GQW---NWKDADAFVAFGTKHNLHMVGHTLVWHS----QIHDEVFKNA 120 (378)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSHH-HHBCTT-CCB---CCHHHHHHHHHHHHTTCEEEEEEEECSS----SSCGGGTBCT
T ss_pred HHHHHHH-HccCCeEEECCcccHH-HhcCCC-Ccc---CchHHHHHHHHHHHCCCEEEeecccccc----cCchhhhcCC
Confidence 4556666 569999999 67665 445544 234 4688999999999999998753 2 53 2222211001
Q ss_pred CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC--ChhHH-----HHHHHHHHHHHHhhCCCeEEEE
Q 013777 235 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV--ALDTL-----KSYYKAGYDAVRKYTSTAYVIM 306 (436)
Q Consensus 235 ~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~--~~~~~-----~~~~~~~~~aIR~~~p~~~Viv 306 (436)
++. .+. +...++..++++.+++||++ .|..||+.|||..... ....| ..|.+.+++++|+.+|+..+++
T Consensus 121 ~g~-~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i~~af~~Ar~~dP~a~L~~ 197 (378)
T 1ur1_A 121 DGS-YISKAALQKKMEEHITTLAGRYKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMY 197 (378)
T ss_dssp TSC-BCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCC-CCCHHHHHHHHHHHHHHHHHHhCC--cceEEEeecccccCCCCccCChhhhhccHHHHHHHHHHHHHhCCCCEEEe
Confidence 111 223 46677888999999999998 7888999999986321 11122 3688999999999999999988
Q ss_pred eC
Q 013777 307 SN 308 (436)
Q Consensus 307 ~~ 308 (436)
.+
T Consensus 198 Nd 199 (378)
T 1ur1_A 198 ND 199 (378)
T ss_dssp EE
T ss_pred cc
Confidence 74
|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=4.1e-09 Score=108.75 Aligned_cols=114 Identities=14% Similarity=0.172 Sum_probs=89.4
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||+.| ++|++.|+++|+|++|+.+.|-.+ .|.+. +.+++..++.+|++|+.+.++||.+||+|++..--+.
T Consensus 74 D~Y~~~--~eDi~lm~~lG~~~~R~sisWsRi-~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL~H~d~P~~--- 147 (501)
T 1e4m_M 74 DSFSYW--QKDIDVLDELNATGYRFSIAWSRI-IPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQT--- 147 (501)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-CTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---
T ss_pred cHHHHH--HHHHHHHHHhCCCeEEccccHHhh-ccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCHH---
Confidence 566666 899999999999999999987644 55542 5677789999999999999999999999976522110
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
- .+.+..|. +...+.+.++.+.+++||++. |..|-.+|||..
T Consensus 148 L---~~~yggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~ 190 (501)
T 1e4m_M 148 L---QDEYEGFLDPQIIDDFKDYADLCFEEFGDS--VKYWLTINQLYS 190 (501)
T ss_dssp H---HHHHCGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEESCTTH
T ss_pred H---HHhcCCCCCchHHHHHHHHHHHHHHHhCCC--CCEEEEecCchh
Confidence 0 00012454 678899999999999999986 777999999983
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.86 E-value=7e-08 Score=105.31 Aligned_cols=116 Identities=16% Similarity=0.136 Sum_probs=86.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+.- .| + -++++++|.++||+||.++... .+.+ ....+
T Consensus 310 ~~dl~~~K~~G~N~iR~~h------~p--~----------~~~~~dlcDe~GilV~~E~~~~--w~~~----~~~~~--- 362 (801)
T 3gm8_A 310 HYRLKLLKDMGCNAIRTSH------NP--F----------SPAFYNLCDTMGIMVLNEGLDG--WNQP----KAADD--- 362 (801)
T ss_dssp HHHHHHHHHTTCCEEEETT------SC--C----------CHHHHHHHHHHTCEEEEECCSS--SSSC----SSTTS---
T ss_pred HHHHHHHHHCCCcEEEecC------CC--C----------cHHHHHHHHHCCCEEEECCchh--hcCC----CCccc---
Confidence 6899999999999999831 11 1 1578899999999999996421 1100 00011
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
+.+...+...+.++.+.+|++++|+|+.|.+.||+.. .+ ..+++++++.+|+.||+++|..+.
T Consensus 363 ~~~~~~~~~~~~~~~mv~r~rNHPSIi~Ws~gNE~~g--~~----~~~~~~l~~~~k~~DptRpvt~~~ 425 (801)
T 3gm8_A 363 YGNYFDEWWQKDMTDFIKRDRNHPSIIMWSIGNEVTG--AT----PEIQHNLVSLFHQLDPDRPVTQGG 425 (801)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCSS--CC----HHHHHHHHHHHHHHCTTSCEEEET
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCeEEEEECccCCCC--cH----HHHHHHHHHHHHHHCCCCCEEEcc
Confidence 1123445556778899999999999999999999942 22 578899999999999999998764
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-07 Score=93.54 Aligned_cols=226 Identities=16% Similarity=0.152 Sum_probs=135.0
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATR 234 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qng~~~sg~~ 234 (436)
+++.+.| ..+||.|++ -+.|. ..+|.++ | .+..+|+++++|+++||+|.... |. + .|.+.+-.. .
T Consensus 28 ~~~~~~~-~~~fn~vt~en~~kW~-~~ep~~G--~---~f~~~D~~v~~a~~~gi~v~ghtl~W~~-~-~q~P~W~~~-~ 97 (348)
T 1w32_A 28 SARQNIV-RAEFNQITAENIMKMS-YMYSGSN--F---SFTNSDRLVSWAAQNGQTVHGHALVWHP-S-YQLPNWASD-S 97 (348)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSGG-GGEETTE--E---CCHHHHHHHHHHHHTTCEEEEEEEECCC-G-GGCCTTCST-T
T ss_pred HHHHHHH-HhhCCeEEECCccchh-hhccCCC--C---CchHHHHHHHHHHHCCCEEEEEeeecCc-c-ccCchhhhc-C
Confidence 3455555 679999999 55554 4455432 3 37889999999999999987532 22 0 122222211 0
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----C-----C------hhHH--HHHHHHHHHHHH
Q 013777 235 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----V-----A------LDTL--KSYYKAGYDAVR 296 (436)
Q Consensus 235 ~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~-----~-----~------~~~~--~~~~~~~~~aIR 296 (436)
.+...++..++++.+++||++ .|..|++.|||.... . . .+.+ ..|...+++++|
T Consensus 98 ------~~~~~~~~~~~i~~v~~rY~g--~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~~~~~lgG~~~i~~aF~~Ar 169 (348)
T 1w32_A 98 ------NANFRQDFARHIDTVAAHFAG--QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRAR 169 (348)
T ss_dssp ------CTTHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCccccCCcccccccccchHHHhcCchHHHHHHHHHHH
Confidence 135778889999999999996 788899999998532 1 0 1223 468899999999
Q ss_pred hhCCCeEEEEeCCCCCCCh---hhh---h----ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhh
Q 013777 297 KYTSTAYVIMSNRLGPADH---KEL---L----SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 366 (436)
Q Consensus 297 ~~~p~~~Viv~~~~~~~~~---~~~---~----~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 366 (436)
+.+|+..+++.+-.-.... ..+ . ....+.+.+-+..|....+ .+.+ .+. +.+..+.
T Consensus 170 ~adP~a~L~~NDyn~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~------p~~~----~~~----~~l~~~a 235 (348)
T 1w32_A 170 AADPTAELYYNDFNTEENGAKTTALVNLVQRLLNNGVPIDGVGFQMHVMNDY------PSIA----NIR----QAMQKIV 235 (348)
T ss_dssp HHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSS------SCHH----HHH----HHHHHHH
T ss_pred HhCCCCEEEecccccccCCchHHHHHHHHHHHHHCCCcccEEEeccccCCCC------CCHH----HHH----HHHHHHh
Confidence 9999999988642110011 111 1 1112345566666865321 1122 222 2233343
Q ss_pred h-cCCCeEEeecccccCCCC-------------C-----cCHHHHHHHHHHHHHHHc--c---CCCcEEEEceec
Q 013777 367 T-SNGPLTFVGEWTCEWNVK-------------D-----ASKQDYQRFANAQLDVYG--R---ATFGWAYWAHKC 417 (436)
Q Consensus 367 ~-~~~p~v~vGEwg~~~~~~-------------~-----~~~~~~~~~~~~q~~~~~--~---~~~Gw~~W~~k~ 417 (436)
. ..|.+|.|+|+....... . ...+...++++..++++- + ...|-++|.+..
T Consensus 236 ~~~~Gl~i~ITElDv~~~~~~~~~~~~~~~~~~~~~~s~~~~~~QA~~y~~~~~~~~~~~~~~~v~git~WG~~D 310 (348)
T 1w32_A 236 ALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQAYLEVVPPGRRGGITVWGIAD 310 (348)
T ss_dssp TTCSSCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEESCSBG
T ss_pred cccCCCeEEEEeCcccCCCcccccccccccCCCccccchhHHHHHHHHHHHHHHHHhccccCCceEEEEEECCcc
Confidence 1 336679999998643210 0 112233445555566654 2 344899998876
|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=2.8e-09 Score=109.44 Aligned_cols=113 Identities=18% Similarity=0.250 Sum_probs=88.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|++|+.|.|-.+ .|.+.+.+++..++..+++|+.|.++||.+||+||+..--|.-
T Consensus 70 D~Yhry--keDi~lm~elG~~~yRfsIsWsRI-~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L---- 142 (481)
T 3f5l_A 70 DQYHRY--KEDVNLMKSLNFDAYRFSISWSRI-FPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLAL---- 142 (481)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHH-CTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEESCSSCCBHHH----
T ss_pred chhhhH--HHHHHHHHHcCCCEEEecCcHHHh-CcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCHHH----
Confidence 567666 899999999999999999988654 4544345677899999999999999999999999975321100
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+.+..|. +...+.+.++.+.+++||++. |--|-.+|||.
T Consensus 143 --~~~yGGW~nr~~v~~F~~Ya~~~~~~fgd~--Vk~W~T~NEp~ 183 (481)
T 3f5l_A 143 --EKKYGGWLNAKMADLFTEYADFCFKTFGNR--VKHWFTFNQPR 183 (481)
T ss_dssp --HHHHCGGGSTTHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred --HHHhCCCCCHHHHHHHHHHHHHHHHHhCCC--CCeEEEccCch
Confidence 00012354 678899999999999999975 44578999997
|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=98.85 E-value=4.4e-09 Score=108.29 Aligned_cols=113 Identities=18% Similarity=0.244 Sum_probs=88.5
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||+.| ++|++.|+++|+|++|+.+.|-.+ .|.+. +.+++..++.+|++|+.|.++||.+||+|++..--+.-
T Consensus 70 D~Y~~~--~eDi~lm~~~G~~~~R~sisWsRi-~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L-- 144 (490)
T 1cbg_A 70 DEYHRY--KEDIGIMKDMNLDAYRFSISWPRV-LPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQAL-- 144 (490)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHH-STTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH--
T ss_pred ChHHHH--HHHHHHHHHhCCCeEEecccHHHh-CCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCHhH--
Confidence 567666 899999999999999999987644 55542 56777899999999999999999999999764221100
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+.+..|. +...+.+.++.+.+++||++. |..|.++|||.
T Consensus 145 ----~~~yggw~~~~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 185 (490)
T 1cbg_A 145 ----EDEYRGFLGRNIVDDFRDYAELCFKEFGDR--VKHWITLNEPW 185 (490)
T ss_dssp ----HHHHCGGGSTTHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ----HhhcCCcCCchHHHHHHHHHHHHHHHhCCc--ceEEEEccCch
Confidence 00012344 567899999999999999987 77799999997
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=98.85 E-value=4.5e-08 Score=109.10 Aligned_cols=116 Identities=16% Similarity=0.232 Sum_probs=84.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+.||+.||++|+|+||+. +| | +. ++++++|.++||+||.++-.... ++. .+. ....
T Consensus 375 ~~dl~lmK~~G~N~IR~~-hy-----p--~~----------~~~ydlcDe~Gi~V~~E~~~~~~---g~~-~~~--~~~~ 430 (1010)
T 3bga_A 375 EQDIRLMKQHNINMVRNS-HY-----P--TH----------PYWYQLCDRYGLYMIDEANIESH---GMG-YGP--ASLA 430 (1010)
T ss_dssp HHHHHHHHHTTCCEEEET-TS-----C--CC----------HHHHHHHHHHTCEEEEECSCBCG---GGC-SST--TCTT
T ss_pred HHHHHHHHHCCCCEEEeC-CC-----C--CC----------HHHHHHHHHCCCEEEEccCcccc---Ccc-ccC--CcCC
Confidence 678999999999999983 11 1 11 36788999999999998722100 000 000 0000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
-.+...+.+.+.++.+++|++++|+|++|.+.|||... ...+++++.||+.||+++|..+
T Consensus 431 ~~~~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpV~~~ 490 (1010)
T 3bga_A 431 KDSTWLTAHMDRTHRMYERSKNHPAIVIWSQGNEAGNG--------INFERTYDWLKSVEKGRPVQYE 490 (1010)
T ss_dssp TCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSSCCS--------HHHHHHHHHHHHHCSSSCEECG
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCEEEEEECccCcCcH--------HHHHHHHHHHHHHCCCCcEEeC
Confidence 01355677888999999999999999999999999741 3467889999999999998765
|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=4.8e-09 Score=109.36 Aligned_cols=113 Identities=16% Similarity=0.265 Sum_probs=89.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||..| ++|++.|+++|+|++|+.+.|-.+ .|.+. +.+++..++.+|++|+.+.++||.+||+|++..--+.
T Consensus 127 D~Yh~y--~eDi~lm~~lG~~~~R~sisWsRi-~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~d~P~~--- 200 (565)
T 1v02_A 127 DSYHMY--AEDVRLLKEMGMDAYRFSISWPRI-LPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQA--- 200 (565)
T ss_dssp CHHHHH--HHHHHHHHHTTCSEEEEECCHHHH-STTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---
T ss_pred cHHHHH--HHHHHHHHHhCCCeEEcccCHHHh-CCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHH---
Confidence 566666 899999999999999999987544 55543 5677889999999999999999999999976421110
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
- .+.+..|. +...+.+.++.+.+++||++. |..|.++|||.
T Consensus 201 L---~~~yggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 242 (565)
T 1v02_A 201 L---VDAYGGFLDERIIKDYTDFAKVCFEKFGKT--VKNWLTFNEPE 242 (565)
T ss_dssp H---HHHHCGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred H---HhhcCCCCCchHHHHHHHHHHHHHHHhCCc--ceEEEEccCch
Confidence 0 00012354 678899999999999999987 77799999997
|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=4.5e-09 Score=107.60 Aligned_cols=114 Identities=21% Similarity=0.327 Sum_probs=88.3
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||+.| ++|++.|+++|+|++|+.+.|-.+ .|.+. +.+++..++.+|++|+.+.++||.+||+|++..--+.
T Consensus 59 D~Y~~y--~eDi~lm~~~G~~~~R~sisWsRi-~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~--- 132 (465)
T 2e3z_A 59 DSYNRW--REDVQLLKSYGVKAYRFSLSWSRI-IPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQA--- 132 (465)
T ss_dssp CTTTTH--HHHHHHHHHTTCSEEEEECCHHHH-STTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHH---
T ss_pred chHHHh--HHHHHHHHHhCCCceecccchHHh-cCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCHH---
Confidence 677766 899999999999999999987544 55543 5677889999999999999999999999965421110
Q ss_pred CCCCCCCCCCCC--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 230 HSATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 230 ~sg~~~~~~~w~--~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
- .+.+..|. +...+.+.++.+.+++||++. |..|.++|||..
T Consensus 133 L---~~~yggw~~~~~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~ 176 (465)
T 2e3z_A 133 L---DDRYGGWLNKEEAIQDFTNYAKLCFESFGDL--VQNWITFNEPWV 176 (465)
T ss_dssp H---HHHHCGGGSHHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHH
T ss_pred H---HhhcCCCCCCcchHHHHHHHHHHHHHHhCCC--ceEEEEccCchH
Confidence 0 00001243 467889999999999999986 777999999973
|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
Probab=98.83 E-value=8.5e-08 Score=107.04 Aligned_cols=201 Identities=18% Similarity=0.156 Sum_probs=118.9
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEc----CCCCCCC-----CCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGSQ-----NGNEH 230 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl----H~~pg~q-----ng~~~ 230 (436)
+.||+.||++|+|+||+. .. | +. +++.++|.++||+||-+. |.....+ ...+.
T Consensus 378 ~~Di~lmK~~g~NaVRts-----Hy-p--~~----------~~fydlCDe~Gi~V~dE~~~e~hG~~~~~~~p~~~~~~~ 439 (1032)
T 3oba_A 378 VRDLILMKKFNINAVRNS-----HY-P--NH----------PKVYDLFDKLGFWVIDEADLETHGVQEPFNRHTNLEAEY 439 (1032)
T ss_dssp HHHHHHHHHTTCCEEECT-----TS-C--CC----------TTHHHHHHHHTCEEEEECSCBCGGGGHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCcEEEec-----CC-C--Ch----------HHHHHHHHHCCCEEEEccccccCCccccccccccccccc
Confidence 689999999999999983 11 1 11 145779999999999986 3210000 00001
Q ss_pred CCCC-------CCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeE
Q 013777 231 SATR-------DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 231 sg~~-------~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ 303 (436)
++.+ .....-.+...+..++-++.|++|++++|+|+.|.+.||+... ...+++++.+|+.||+++
T Consensus 440 ~~~~~~~~~~~~~~~~~~p~w~~~~~~~~~~mV~RdrNHPSIi~WslgNE~~~g--------~~~~~~~~~~k~~DptRp 511 (1032)
T 3oba_A 440 PDTKNKLYDVNAHYLSDNPEYEVAYLDRASQLVLRDVNHPSIIIWSLGNEACYG--------RNHKAMYKLIKQLDPTRL 511 (1032)
T ss_dssp TTTTHHHHTTTGGGTTTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCBSCCCC--------HHHHHHHHHHHHHCTTSE
T ss_pred cccccccccccccccCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEECccCCccc--------hhHHHHHHHHHHhCCCCc
Confidence 1100 0000011455777888999999999999999999999998631 246788999999999999
Q ss_pred EEEeCCCCCCChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCC
Q 013777 304 VIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 383 (436)
Q Consensus 304 Viv~~~~~~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~ 383 (436)
|...+.+. ...-.|++. +|.. .++ +........ ........|+|+.||+-+..
T Consensus 512 v~~e~~~~------------~~~~Di~s~-mY~~---------~~~-i~~~~~~~~----~~~~~~~kP~i~~Ey~Hamg 564 (1032)
T 3oba_A 512 VHYEGDLN------------ALSADIFSF-MYPT---------FEI-MERWRKNHT----DENGKFEKPLILCEYGHAMG 564 (1032)
T ss_dssp EECTTCTT------------CTTCSSEEE-ESCC---------HHH-HHHHHHHHB----CTTSCBSSCEEEEEESCCCS
T ss_pred EEeccCcC------------cccceeeec-cCCC---------HHH-HHHHHhhCc----ccccccCCCEEEEecccccc
Confidence 97653221 112234555 4632 122 221111000 00001134699999997664
Q ss_pred CCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 384 VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 384 ~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
.+... +.+|.+.. +.+. .-.|-+.|.|-..
T Consensus 565 n~~g~---l~~yw~~~-~~~p-~~~GgfiWdw~Dq 594 (1032)
T 3oba_A 565 NGPGS---LKEYQELF-YKEK-FYQGGFIWEWANH 594 (1032)
T ss_dssp SCCCC---HHHHHHHH-HHCT-TEEEEEESCSBCC
T ss_pred CCCCC---HHHHHHHH-HhCC-CeeEEEEEecccc
Confidence 33333 34444322 2233 4568899988763
|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
Probab=98.82 E-value=3.9e-09 Score=109.47 Aligned_cols=113 Identities=19% Similarity=0.272 Sum_probs=88.9
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||+.| ++|++.|+++|+|++|+.+.|-.+ .|.+. +.+++..++.+|++|+.+.++||.+||+|++..--+.
T Consensus 94 D~Y~~y--~eDi~lm~~lG~~~~R~sisWsRi-~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~d~P~~--- 167 (532)
T 2jf7_A 94 NCYHMY--KEDIKIMKQTGLESYRFSISWSRV-LPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQA--- 167 (532)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-STTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---
T ss_pred hHHHHH--HHHHHHHHHcCCCeEeccccHHHh-ccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHH---
Confidence 567666 899999999999999999987644 45542 5777889999999999999999999999976421110
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
- .+.+..|. +...+.+.++.+.+++||++. |..|..+|||.
T Consensus 168 L---~~~yggw~~r~~~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~ 209 (532)
T 2jf7_A 168 L---EDEYGGFLSHRIVDDFCEYAEFCFWEFGDK--IKYWTTFNEPH 209 (532)
T ss_dssp H---HHHHCGGGSTHHHHHHHHHHHHHHHHHGGG--CSEEEEEECHH
T ss_pred H---HhhcCCCCCchHHHHHHHHHHHHHHHhCCc--CceEEEccCch
Confidence 0 00012454 678899999999999999986 77799999997
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.8e-07 Score=92.86 Aligned_cols=235 Identities=14% Similarity=0.151 Sum_probs=136.3
Q ss_pred HHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCCC
Q 013777 161 EDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGF 237 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~-pg~qng~~~sg~~~~~ 237 (436)
++.+.| ..+||.|++ .+.|. ..+|.+ +.| .+..+|++|++|+++||+|.. |.. -.+|.+.+-.....|.
T Consensus 33 ~~~~l~-~~~fn~vt~en~~kW~-~~ep~~-G~~---~f~~~D~~v~~a~~~gi~v~g--htlvW~~q~P~W~~~~~~G~ 104 (356)
T 2uwf_A 33 RQAQIL-KHHYNSLVAENAMKPV-SLQPRE-GEW---NWEGADKIVEFARKHNMELRF--HTLVWHSQVPEWFFIDENGN 104 (356)
T ss_dssp HHHHHH-HHHCSEEEESSTTSHH-HHCSBT-TBC---CCHHHHHHHHHHHHHTCEEEE--CCSEESSSCCGGGGBCTTSC
T ss_pred HHHHHH-HhcCCEEEECCcccHH-HhcCCC-Ccc---CchHHHHHHHHHHHCCCEEEE--eeccccccCchhHhcCCCCc
Confidence 445555 679999999 66664 445543 233 468899999999999999875 321 0123322221111111
Q ss_pred C----------CCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC--hhHH-----HHHHHHHHHHHHh-h
Q 013777 238 Q----------EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRK-Y 298 (436)
Q Consensus 238 ~----------~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~-~ 298 (436)
. ... +...++..++++.+++||++ .|..||+.|||...... ...| ..|...++++.|+ .
T Consensus 105 ~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~v~~wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~~~ 182 (356)
T 2uwf_A 105 RMVDETDPEKRKANKQLLLERMENHIKTVVERYKD--DVTSWDVVNEVIDDDGGLRESEWYQITGTDYIKVAFETARKYG 182 (356)
T ss_dssp BGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHHHHHHcCC--cceEEEeecccccCCCCcccchHHhhccHHHHHHHHHHHHhhC
Confidence 0 011 33456778999999999996 78899999999853211 1112 3688999999999 9
Q ss_pred CCCeEEEEeCCCCCCCh---hh---hh----ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhc
Q 013777 299 TSTAYVIMSNRLGPADH---KE---LL----SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTS 368 (436)
Q Consensus 299 ~p~~~Viv~~~~~~~~~---~~---~~----~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 368 (436)
+|+..+++.+- ..... .. +. ....+.+.+-+..|....+ .+.+ .+.. .+..+...
T Consensus 183 dP~a~L~~Ndy-n~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~------p~~~----~~~~----~l~~~a~~ 247 (356)
T 2uwf_A 183 GEEAKLYINDY-NTEVPSKRDDLYNLVKDLLEQGVPIDGVGHQSHIQIGW------PSIE----DTRA----SFEKFTSL 247 (356)
T ss_dssp CTTCCEEEEES-CTTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SCHH----HHHH----HHHHHHTT
T ss_pred CCCCEEEeccc-cccccchhHHHHHHHHHHHHCCCcccEEEEEEecCCCC------CCHH----HHHH----HHHHHHhc
Confidence 99999988742 11111 11 21 1112245566666865321 1222 2221 22333333
Q ss_pred CCCeEEeecccccCCCC----------CcC---HHHHHHHHHHHHHHHcc---CCCcEEEEceecCCCCC
Q 013777 369 NGPLTFVGEWTCEWNVK----------DAS---KQDYQRFANAQLDVYGR---ATFGWAYWAHKCEANHW 422 (436)
Q Consensus 369 ~~p~v~vGEwg~~~~~~----------~~~---~~~~~~~~~~q~~~~~~---~~~Gw~~W~~k~~~~~W 422 (436)
|.+|.|+|+....... ..+ .+...++++..+.++-+ ...|-++|.+... ..|
T Consensus 248 -Gl~i~iTElDi~~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~git~WG~~D~-~sW 315 (356)
T 2uwf_A 248 -GLDNQVTELDMSLYGWPPTGAYTSYDDIPEELFQAQADRYDQLFELYEELSATISSVTFWGIADN-HTW 315 (356)
T ss_dssp -TCEEEEEEEEEESSCSSCTTCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSSTT-SCH
T ss_pred -CCcEEEEeccccCCCCccccccccccCCChHHHHHHHHHHHHHHHHHHhccCCEEEEEEECCCCC-Ccc
Confidence 5569999997643210 011 22334455555555533 3468999988763 344
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1e-08 Score=105.46 Aligned_cols=111 Identities=18% Similarity=0.222 Sum_probs=88.4
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+. |.. .++..+..++..+++|+.|.++||.++|+||+..--|.
T Consensus 63 D~Yhry--~EDi~Lm~elG~~~yRfSIsWsRI~-P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL~H~DlP~~---- 135 (487)
T 3vii_A 63 DSYHLY--KEDVKILKELGAQVYRFSISWARVL-PEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQA---- 135 (487)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHHS-TTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH----
T ss_pred ChHHHH--HHHHHHHHHcCCCEEEeeCCHHHcC-cCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEecCCCcHH----
Confidence 567776 8999999999999999999986554 443 35667789999999999999999999999998532111
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCC
Q 013777 231 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEP 274 (436)
Q Consensus 231 sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP 274 (436)
......|. +..++.+.++.+.+.++|++.- --|-.+|||
T Consensus 136 ---L~~~GGW~nr~~v~~F~~YA~~~f~~fgdrV--k~W~T~NEp 175 (487)
T 3vii_A 136 ---LQDLGGWPNLVLAKYSENYARVLFKNFGDRV--KLWLTFNEP 175 (487)
T ss_dssp ---HHTTTSTTSTHHHHHHHHHHHHHHHHHTTTC--CEEEEEECH
T ss_pred ---HHHcCCCCCHHHHHHHHHHHHHHHHHhcCCC--CeEEEecCc
Confidence 01123465 7889999999999999999853 346699999
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=98.78 E-value=3.4e-07 Score=91.50 Aligned_cols=238 Identities=13% Similarity=0.142 Sum_probs=134.8
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGF 237 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~ 237 (436)
+++.+.| ..+||.|++ .+.|. ..+|.+ +.| .+..+|++|++|+++||+|....-. -.+|.+.+-....+|.
T Consensus 42 ~~~~~l~-~~~fn~vt~eNe~kW~-~~ep~~-G~~---~f~~~D~~v~~a~~~gi~vrghtlv-W~~q~P~W~~~~~~G~ 114 (379)
T 1r85_A 42 EKDVQML-KRHFNSIVAENVMKPI-SIQPEE-GKF---NFEQADRIVKFAKANGMDIRFHTLV-WHSQVPQWFFLDKEGK 114 (379)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSHH-HHCSBT-TBC---CCHHHHHHHHHHHHTTCEEEEECSC-CSTTCCGGGGBCTTSS
T ss_pred HHHHHHH-HhhCCeEEECCcccHH-HhcCCC-Ccc---CchhHHHHHHHHHHCCCEEEEeccc-ccccCchhhhcCcCCc
Confidence 4566666 669999999 46654 445543 233 4688999999999999998764310 0112222221000111
Q ss_pred C----------CCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC--ChhHH-----HHHHHHHHHHHHh-h
Q 013777 238 Q----------EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV--ALDTL-----KSYYKAGYDAVRK-Y 298 (436)
Q Consensus 238 ~----------~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~--~~~~~-----~~~~~~~~~aIR~-~ 298 (436)
. ... +...++..++++.+++||++ .|..|+++|||..... ....| ..|...++++.|+ .
T Consensus 115 ~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdV~NE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~a 192 (379)
T 1r85_A 115 PMVNETDPVKREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYG 192 (379)
T ss_dssp BGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEeecccccCCCCccCchHHHhhhHHHHHHHHHHHHhhC
Confidence 0 011 24556778999999999998 7889999999985321 01122 3688999999999 9
Q ss_pred CCCeEEEEeCCC--CCCChhhhhc-------cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcC
Q 013777 299 TSTAYVIMSNRL--GPADHKELLS-------FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 369 (436)
Q Consensus 299 ~p~~~Viv~~~~--~~~~~~~~~~-------~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 369 (436)
+|+..+++.+-. .......+.. -..+.+.+-+..|.-..+ .+.+ .+.. .+..+...
T Consensus 193 dP~a~L~~NDyn~~~~~k~~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~------p~~~----~~~~----~l~~~a~l- 257 (379)
T 1r85_A 193 GDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGW------PSEA----EIEK----TINMFAAL- 257 (379)
T ss_dssp CTTSEEEEEESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSS------SCHH----HHHH----HHHHHHHT-
T ss_pred CCCCEEEecccccccchhHHHHHHHHHHHHHCCCceeEEEEeEEecCCC------CCHH----HHHH----HHHHHHhc-
Confidence 999999886421 1111111111 111234555555752111 1222 2222 22333333
Q ss_pred CCeEEeecccccCCCCC---------cC---HHHHHHHHHHHHHHHccCC--Cc-EEEEceecCCCCC
Q 013777 370 GPLTFVGEWTCEWNVKD---------AS---KQDYQRFANAQLDVYGRAT--FG-WAYWAHKCEANHW 422 (436)
Q Consensus 370 ~p~v~vGEwg~~~~~~~---------~~---~~~~~~~~~~q~~~~~~~~--~G-w~~W~~k~~~~~W 422 (436)
|.+|.|+|+........ .+ .+...++++..+.++-+.. ++ -++|.+.. ...|
T Consensus 258 GlpI~iTElDi~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~V~git~WG~~D-~~sW 324 (379)
T 1r85_A 258 GLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIAD-NHTW 324 (379)
T ss_dssp TCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSST-TSCG
T ss_pred CCeEEEeeccccCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHhCcCceeEEEEeCCcC-CCCc
Confidence 55699999986532100 01 2234455555555554332 45 88998876 3445
|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
Probab=98.78 E-value=6.4e-09 Score=106.90 Aligned_cols=114 Identities=18% Similarity=0.264 Sum_probs=88.0
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+. |.. .++..+..++..+++|+.|.++||.++|+|++..--|.=
T Consensus 71 D~Yhry--~eDi~Lm~elG~~~yRfSIsWsRI~-P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H~DlP~~L--- 144 (481)
T 3qom_A 71 DFYHRY--PEDIELFAEMGFKCFRTSIAWTRIF-PNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEMPYHL--- 144 (481)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHHS-SSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH---
T ss_pred cHHHHH--HHHHHHHHHcCCCEEEecCcHHHcC-cCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEEccCCCCHHH---
Confidence 577777 8999999999999999999986554 443 245667799999999999999999999999875221100
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 231 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 231 sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
.+.+..|. +..++.+.++.+.+++||++. |--|-.+|||..
T Consensus 145 ---~~~yGGW~nr~~v~~F~~YA~~~f~~fgdr--Vk~W~T~NEp~~ 186 (481)
T 3qom_A 145 ---VKQYGGWRNRKLIQFYLNFAKVCFERYRDK--VTYWMTFNEINN 186 (481)
T ss_dssp ---HHHHCGGGSTHHHHHHHHHHHHHHHHTTTT--CCEEEEETTGGG
T ss_pred ---HhhcCCCCCHHHHHHHHHHHHHHHHHhCCc--CCEEEEccCccH
Confidence 00112355 678999999999999999974 444779999973
|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.2e-08 Score=104.56 Aligned_cols=112 Identities=15% Similarity=0.134 Sum_probs=87.0
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||..| ++|++.|+++|+|++|+.+.|-.+ .|.+. +.+++..++.+|++|+.|.++||.+||+|++..--+.-.
T Consensus 59 D~Y~~y--~eDi~lm~~lG~~~~R~sisWsRi-~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~- 134 (473)
T 3ahy_A 59 DSYNRT--AEDIALLKSLGAKSYRFSISWSRI-IPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLPEGLH- 134 (473)
T ss_dssp CGGGCH--HHHHHHHHHHTCSEEEEECCHHHH-SSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHH-
T ss_pred chHHHH--HHHHHHHHHhCCCeEEccccHHhh-cCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCHHHH-
Confidence 677777 899999999999999999987644 55543 567788999999999999999999999997642110000
Q ss_pred CCCCCCCCCCCC--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~--~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
+.+..|. +...+.+.++.+.++++| +. |..|.++|||.
T Consensus 135 -----~~yggw~~~~~~~~~f~~ya~~~~~~~-dr--V~~W~t~NEp~ 174 (473)
T 3ahy_A 135 -----QRYGGLLNRTEFPLDFENYARVMFRAL-PK--VRNWITFNEPL 174 (473)
T ss_dssp -----HHHCGGGCTTHHHHHHHHHHHHHHHHC-TT--CCEEEEEECHH
T ss_pred -----hhcCCCcCchhhHHHHHHHHHHHHHHh-Cc--CCEEEecCchh
Confidence 0011242 467899999999999999 54 77799999996
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=6.4e-08 Score=101.72 Aligned_cols=137 Identities=16% Similarity=0.224 Sum_probs=97.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCC-CCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS-QNGNEHSATRDGFQ 238 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~-qng~~~sg~~~~~~ 238 (436)
+++++.||++|+|+||+.|.|- ..+|.+ +.|+=+....||++++.|+++||+|||.. |. .++.+..| +.+
T Consensus 43 ~d~l~kmKa~G~NtV~~yv~W~-~hEP~~-G~fdF~g~~DL~~fl~~a~~~GL~ViLr~----GPyi~aEw~~G---G~P 113 (654)
T 3thd_A 43 KDRLLKMKMAGLNAIQTYVPWN-FHEPWP-GQYQFSEDHDVEYFLRLAHELGLLVILRP----GPYICAEWEMG---GLP 113 (654)
T ss_dssp HHHHHHHHHTTCSEEEEECCHH-HHCSBT-TBCCCSGGGCHHHHHHHHHHTTCEEEEEC----CSCCCTTBGGG---GCC
T ss_pred HHHHHHHHHcCCCEEEEEechh-hcCCCC-CccCccchHHHHHHHHHHHHcCCEEEecc----CCccccccCCC---cCC
Confidence 7999999999999999988765 456654 45654444569999999999999999963 21 11111111 122
Q ss_pred CCC------------hhHHHHHHHHHHHHHHH-----hCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhh-CC
Q 013777 239 EWG------------DSNVADTVAVIDFLAAR-----YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKY-TS 300 (436)
Q Consensus 239 ~w~------------~~~~~~~~~~~~~lA~r-----y~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~-~p 300 (436)
.|- +.+.+...++++.|+++ |++.+.|+++++=||-....... +.|++.+.+..|+. +-
T Consensus 114 ~WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~~~~~~~ggpVI~~QvENEyG~y~~~d---~~Ym~~l~~~~~~~~Gi 190 (654)
T 3thd_A 114 AWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACD---FDYLRFLQKRFRHHLGD 190 (654)
T ss_dssp GGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGSSCCC---HHHHHHHHHHHHHHHCS
T ss_pred hHHhcCCCceEecCCHHHHHHHHHHHHHHHHHhhhhhccCCCCEEEEEeccccccccccc---HHHHHHHHHHHHHhcCC
Confidence 222 56778888999999999 88889999999999986322112 46777777778875 65
Q ss_pred CeEEEEeC
Q 013777 301 TAYVIMSN 308 (436)
Q Consensus 301 ~~~Viv~~ 308 (436)
+.+++-++
T Consensus 191 ~v~l~t~D 198 (654)
T 3thd_A 191 DVVLFTTD 198 (654)
T ss_dssp SSEEEEEE
T ss_pred ceeeEeec
Confidence 66666554
|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.5e-08 Score=104.69 Aligned_cols=113 Identities=19% Similarity=0.282 Sum_probs=88.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+ .|... ++..+..++..+++|+.|.++||.++|+||+..--|.=
T Consensus 85 D~Yhry--kEDi~Lm~elG~~~yRfSIsWsRI-~P~g~~~g~vN~~Gl~fY~~lid~l~~~GIeP~VTL~HwDlP~~L-- 159 (505)
T 3ptm_A 85 DSYHLY--KEDVRLMKDMGMDAYRFSISWTRI-LPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQAL-- 159 (505)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-STTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH--
T ss_pred cHHHHH--HHHHHHHHHcCCCEEEeeccHHHc-CcCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCCcHHH--
Confidence 567776 899999999999999999998655 44432 46677899999999999999999999999875321100
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+....|. +..++.+.++.+.+++||++. |--|-.+|||.
T Consensus 160 ----~~~yGGW~nr~~v~~F~~YA~~~f~~fgDr--Vk~W~T~NEp~ 200 (505)
T 3ptm_A 160 ----EDKYNGFLSPNIINDFKDYAEICFKEFGDR--VKNWITFNEPW 200 (505)
T ss_dssp ----HHHHCGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ----HHhcCCcCCHHHHHHHHHHHHHHHHHhCcc--CceEEEecCcc
Confidence 00112455 678899999999999999985 44477999997
|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=1.3e-08 Score=105.23 Aligned_cols=113 Identities=21% Similarity=0.270 Sum_probs=88.3
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+ .|.. .+++.+..++..+++|+.|.++||.++|+||+..--|.=
T Consensus 73 D~YhrY--kEDi~Lm~elG~~~yRfSIsWsRI-~P~g~~~g~~N~~Gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L-- 147 (513)
T 4atd_A 73 DSYHLY--KEDVNILKNLGLDAYRFSISWSRV-LPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQAL-- 147 (513)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-STTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH--
T ss_pred chHHHH--HHHHHHHHHcCCCEEEEeCcHHHc-CCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCcHHH--
Confidence 567777 899999999999999999998655 4443 246677899999999999999999999999875321100
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+.+..|. +..++.+.++.+.+++||++. |--|-.+|||.
T Consensus 148 ----~~~yGGW~nr~~v~~F~~YA~~~f~~fgdr--Vk~WiT~NEp~ 188 (513)
T 4atd_A 148 ----EDEYGGFLSPRIVDDFCEYAELCFWEFGDR--VKHWMTLNEPW 188 (513)
T ss_dssp ----HHHHCGGGSTTHHHHHHHHHHHHHHHHTTT--CCEEEEEECHH
T ss_pred ----HHHcCCcCCHHHHHHHHHHHHHHHHHhcCc--CceEEEccCcc
Confidence 00112354 678899999999999999985 44477999996
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1e-06 Score=86.77 Aligned_cols=231 Identities=13% Similarity=0.202 Sum_probs=138.8
Q ss_pred HHHHHHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEE---EcCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSATR 234 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vil---DlH~~pg~qng~~~sg~~ 234 (436)
+...+.+-..-||.|.. .+-|. ..+|.++ .| .+...|++|++|+++||.|.. --|. |.+.+-.
T Consensus 47 ~~~y~~~~~~~Fn~~t~eN~mKW~-~iep~~G-~~---~f~~~D~~v~~a~~~gi~vrgHtLvWh~----q~P~W~~--- 114 (341)
T 3niy_A 47 EEKYMEVARREFNILTPENQMKWD-TIHPERD-RY---NFTPAEKHVEFAEENNMIVHGHTLVWHN----QLPGWIT--- 114 (341)
T ss_dssp HHHHHHHHHHHCSEEEESSTTSHH-HHCCBTT-EE---ECHHHHHHHHHHHHTTCEEEEEEEECSS----SCCHHHH---
T ss_pred CHHHHHHHHHhCCEEEECcccchH-HhcCCCC-cc---ChHHHHHHHHHHHHCCCeEEeeeccccc----cCchhhh---
Confidence 44555555668999998 66654 4455432 33 467899999999999999853 2342 2221111
Q ss_pred CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC--hhHH-----HHHHHHHHHHHHhhCCCeEEEE
Q 013777 235 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVIM 306 (436)
Q Consensus 235 ~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Viv 306 (436)
...|. +...+.+.++++.+++||++ .|..||++|||...... ...| ..|...++++.|+.+|+..+++
T Consensus 115 --~~~~~~~~~~~~~~~~i~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~dP~a~L~~ 190 (341)
T 3niy_A 115 --GREWTKEELLNVLEDHIKTVVSHFKG--RVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWTKEADPDAILIY 190 (341)
T ss_dssp --TSCCCHHHHHHHHHHHHHHHHHHTTT--TCCEEEEEECCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEEE
T ss_pred --cCCCCHHHHHHHHHHHHHHHHHHcCC--CccEEEEecccccccccccccchhhhcCHHHHHHHHHHHHHHCCCceEEe
Confidence 01244 46677888999999999997 57789999999853211 1112 3688999999999999999998
Q ss_pred eCCC-CCCCh--h-------hhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEee
Q 013777 307 SNRL-GPADH--K-------ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 376 (436)
Q Consensus 307 ~~~~-~~~~~--~-------~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vG 376 (436)
.+-. ..... . .+.....+-+.+-+..|.... ..+.. .+. +.+..+... |.+|.|+
T Consensus 191 NDyn~e~~~~k~~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~------~~~~~----~~~----~~l~~~a~l-Gl~v~iT 255 (341)
T 3niy_A 191 NDYSIEEINAKSNFVYNMIKELKEKGVPVDGIGFQMHIDYR------GLNYD----SFR----RNLERFAKL-GLQIYIT 255 (341)
T ss_dssp EESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETT------CCCHH----HHH----HHHHHHHHT-TCEEEEE
T ss_pred eccccccCchHHHHHHHHHHHHHHCCCCcceEeeeeecCCC------CCCHH----HHH----HHHHHHHHc-CCeEEEE
Confidence 7421 11111 1 111222345778888897432 11212 122 223333333 5569999
Q ss_pred cccccCCCCCc---CHHHHHHHHHHHHHHHcc--CCCcEEEEceecCCCCC
Q 013777 377 EWTCEWNVKDA---SKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHW 422 (436)
Q Consensus 377 Ewg~~~~~~~~---~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~~~~W 422 (436)
|+......... ..+...++++..++++-+ ...|-++|.+... ..|
T Consensus 256 ElDv~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~v~git~Wg~~D~-~sW 305 (341)
T 3niy_A 256 EMDVRIPLSGSEDYYLKKQAEICAKIFDICLDNPAVKAIQFWGFTDK-YSW 305 (341)
T ss_dssp EEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBTT-SCS
T ss_pred eccccCCCCCChhHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCccC-Ccc
Confidence 99864321111 112233445555544433 4679999998763 344
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=9.1e-07 Score=86.76 Aligned_cols=229 Identities=13% Similarity=0.148 Sum_probs=135.3
Q ss_pred HHHHhCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCCCCCC
Q 013777 164 KFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQEW 240 (436)
Q Consensus 164 ~~ia~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~-pg~qng~~~sg~~~~~~~w 240 (436)
..+....||.|.. .+.|. ..+|.++ .| .+...|+++++|+++||.|.. |.. -.+|.+.+-.....+ ..+
T Consensus 30 ~~~~~~~Fn~~t~eN~mKW~-~iep~~G-~~---~f~~~D~~v~~a~~~gi~vrg--HtLvWh~q~P~W~~~~~~g-~~~ 101 (331)
T 3emz_A 30 GEFIAKHYNSVTAENQMKFE-EVHPREH-EY---TFEAADEIVDFAVARGIGVRG--HTLVWHNQTPAWMFEDASG-GTA 101 (331)
T ss_dssp HHHHHHHCSEEEESSTTSHH-HHCSBTT-BC---CCHHHHHHHHHHHTTTCEEEE--CCSBCSSSCCGGGGBCTTS-SBC
T ss_pred HHHHHHhCCEEEECcccchh-hhcCCCC-cc---ChhHHHHHHHHHHHCCCEEee--eeeeccccCcHhHhccccC-CCC
Confidence 4444667999998 66554 4455442 33 467899999999999999854 332 112333222110011 123
Q ss_pred C-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC----hhHH-----HHHHHHHHHHHHhhCCCeEEEEeCCC
Q 013777 241 G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----LDTL-----KSYYKAGYDAVRKYTSTAYVIMSNRL 310 (436)
Q Consensus 241 ~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~----~~~~-----~~~~~~~~~aIR~~~p~~~Viv~~~~ 310 (436)
. +...+++.++++.+++||++ .|..||++|||.....+ ...| ..|...++++.|+.+|+..+++.+-.
T Consensus 102 ~~~~l~~~~~~~I~~v~~rYkg--~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~~i~~aF~~Ar~adP~a~L~~NDyn 179 (331)
T 3emz_A 102 SREMMLSRLKQHIDTVVGRYKD--QIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAFNMAHEADPNALLFYNDYN 179 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCSSTTCCBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHhCC--CceEEEEeccccCCCCCccccCCchhhhcCHHHHHHHHHHHHhhCCCceEEecccc
Confidence 3 35567788999999999997 68889999999853211 1112 25889999999999999999987421
Q ss_pred CCCCh----------hhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccc
Q 013777 311 GPADH----------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTC 380 (436)
Q Consensus 311 ~~~~~----------~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~ 380 (436)
.... ..+.....+.+.+-+..|..... .+. ..+. +.+..+... |.+|.|+|+..
T Consensus 180 -~~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~------p~~----~~~~----~~l~~~a~l-Gl~v~iTElDi 243 (331)
T 3emz_A 180 -ETDPVKREKIYNLVRSLLDQGAPVHGIGMQGHWNIHG------PSM----DEIR----QAIERYASL-DVQLHVTELDL 243 (331)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTB------SCH----HHHH----HHHHHHHTT-SCEEEEEEEEE
T ss_pred -ccChHHHHHHHHHHHHHHHCCCccceEEECceecCCC------CCH----HHHH----HHHHHHHHc-CCcEEEeeccc
Confidence 1111 11111123467788889964221 112 2222 223334333 55699999975
Q ss_pred cCCC--------CCcCH---HHHHHHHHHHHHHHcc---CCCcEEEEceecC
Q 013777 381 EWNV--------KDASK---QDYQRFANAQLDVYGR---ATFGWAYWAHKCE 418 (436)
Q Consensus 381 ~~~~--------~~~~~---~~~~~~~~~q~~~~~~---~~~Gw~~W~~k~~ 418 (436)
.... ...+. +...++++..+.++-+ ...|-++|.+...
T Consensus 244 ~~~~~~~~~~~~~~~t~~~~~~Qa~~y~~~~~~~~~~~~~v~giT~WG~~D~ 295 (331)
T 3emz_A 244 SVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREYRSNITSVTFWGVADN 295 (331)
T ss_dssp ESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESSSSTT
T ss_pred CCccccccccccCCCCHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEECCCCC
Confidence 4321 11222 2233445555555533 3459999988763
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
Probab=98.60 E-value=3.2e-08 Score=101.95 Aligned_cols=112 Identities=19% Similarity=0.304 Sum_probs=75.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCC---------CCCC--CCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA---------APGS--QNGN 228 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~---------~pg~--qng~ 228 (436)
+++++.||++|+|+||+++. |...+|.+ +.|+ ++.||++++.|+++||+|||-+.+ .|.. ....
T Consensus 76 ~~~W~~mKa~G~NtVr~~V~-W~~hEP~~-G~yD---F~~LD~~ldla~e~GL~VIL~i~aeW~~ggta~~P~WL~~d~~ 150 (552)
T 3u7v_A 76 AKVWPAIEKVGANTVQVPIA-WEQIEPVE-GQFD---FSYLDLLLEQARERKVRLVLLWFGTWKNSSPSYAPEWVKLDDK 150 (552)
T ss_dssp HHHHHHHHHHTCSEEEEEEE-HHHHCSBT-TBCC---CHHHHHHHHHHHHTTCEEEEEEEEEEETTBCTTSCHHHHTCTT
T ss_pred HHHHHHHHHhCCCEEEEEeh-hhccCCCC-CccC---hhhHHHHHHHHHHCCCEEEEEeccccccCCCcCCCchhhcCcc
Confidence 45566899999999999995 45566654 3553 566999999999999999997332 1110 0000
Q ss_pred ------CCCCCCCC-CCCCCh----hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 229 ------EHSATRDG-FQEWGD----SNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 229 ------~~sg~~~~-~~~w~~----~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
...|.+.. .....+ ...+.+.++.+.|++||+++|.|++|++-||+..
T Consensus 151 ~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r~~~~p~VI~wQIeNEyG~ 209 (552)
T 3u7v_A 151 RFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLKAKDAAQKTVIMVQVENETGT 209 (552)
T ss_dssp TSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEESCSB
T ss_pred cCceeECCCCcEeecCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecccCCC
Confidence 00010000 011112 3356667888999999999999999999999874
|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=4.2e-08 Score=102.46 Aligned_cols=113 Identities=21% Similarity=0.261 Sum_probs=88.7
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+. |.. .++..+..++..+++|+.|.++||..+|+||+..--|.=
T Consensus 73 D~Yhry--~EDi~Lm~elG~~~yRfSIsWsRI~-P~G~~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H~dlP~~L-- 147 (540)
T 4a3y_A 73 DSYHLY--KEDVNILKNLGLDAYRFSISWSRVL-PGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQAL-- 147 (540)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHHS-TTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHH--
T ss_pred chhHhh--HHHHHHHHHcCCCEEEeeccHhhcc-cCCCCCCCCCHHHHHHHHHHHHHHHHcCCccceeccCCCCcHHH--
Confidence 577777 8999999999999999999986554 432 245677899999999999999999999999986422100
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+.+..|. +..++.++++.+.+.++|++.-.. |=.+|||.
T Consensus 148 ----~~~yGGW~nr~~v~~F~~Ya~~~f~~fgdrVk~--W~T~NEP~ 188 (540)
T 4a3y_A 148 ----EDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKH--WMTLNEPW 188 (540)
T ss_dssp ----HHHHCGGGSTHHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred ----HhccCCcCChHHHHHHHHHHHHHHHHhccccCE--eeEccccH
Confidence 00113465 688999999999999999986443 66899995
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.56 E-value=2.2e-05 Score=79.93 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=91.1
Q ss_pred HHHHHHHHhCCCCEEEecCc----cccccCC--CCCC----CCc----cchHHHHHHHHHHHHHcCCEEEEEcCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVG----WWIANDP--TPPK----PFV----GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ 225 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~----~~~~~~~--~~~~----~~~----~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~q 225 (436)
+.-++..++.|||+||+-+- -+..... -..+ .+. +.+++.+|++|+.|.++||++-|=+-. |..
T Consensus 55 ~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g~~pf~~~~df~~~n~pn~~~YF~h~d~~I~~a~~~Gi~~~Lv~~W--g~~ 132 (463)
T 3kzs_A 55 EYYLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSMTDGYNFKNINQKGVYGYWDHMDYIIRTAAKKGLYIGMVCIW--GSP 132 (463)
T ss_dssp HHHHHHHHHTTCCEEEEESCSSSSCBCTTSCBSCSSTTCCTTCCCTTCCCHHHHHHHHHHHHHHTTCEEEEESSC--HHH
T ss_pred HHHHHHHHHCCCCEEEEEeecCCCCCCcCCCCCcCCCcccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEEe--CCc
Confidence 45688999999999999772 0111010 0000 111 269999999999999999998874431 110
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEE
Q 013777 226 NGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 305 (436)
Q Consensus 226 ng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Vi 305 (436)
...+ .-+.+....+++.|++||++.++|+ |-|-||=... .-....+++.+.|++.+|++++.
T Consensus 133 ---v~~~---------~m~~e~~~~Y~ryl~~Ry~~~~Nii-W~lgGD~~~~-----~~~~~w~~~~~~i~~~dp~~L~T 194 (463)
T 3kzs_A 133 ---VSHG---------EMNVDQAKAYGKFLAERYKDEPNII-WFIGGDIRGD-----VKTAEWEALATSIKAIDKNHLMT 194 (463)
T ss_dssp ---HHTT---------SCCHHHHHHHHHHHHHHHTTCSSEE-EEEESSSCTT-----SSHHHHHHHHHHHHHHCCSSCEE
T ss_pred ---cccC---------CCCHHHHHHHHHHHHHHhccCCCCE-EEeCCCCCCc-----cCHHHHHHHHHHHHhcCCCCcEE
Confidence 0000 0246778899999999999999998 9999996532 12346667788899999999999
Q ss_pred EeCC
Q 013777 306 MSNR 309 (436)
Q Consensus 306 v~~~ 309 (436)
+++.
T Consensus 195 ~H~~ 198 (463)
T 3kzs_A 195 FHPR 198 (463)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9964
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=6.4e-08 Score=105.55 Aligned_cols=143 Identities=20% Similarity=0.217 Sum_probs=100.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+++++.||++|||+|++.|.| ...+|.+ +.|+=.....|+++++.|+++||+|||-.=-+ .++.+..| +.+.
T Consensus 59 ~d~l~kmKa~GlNtV~tYV~W-n~hEP~e-G~fdFsg~~dL~~fl~la~e~GL~VILRpGPY---i~aEw~~G---G~P~ 130 (1003)
T 3og2_A 59 LDVFHKIKALGFNTVSFYVDW-ALLEGKP-GRFRADGIFSLEPFFEAATKAGIYLLARPGPY---INAEVSGG---GFPG 130 (1003)
T ss_dssp HHHHHHHHTTTCCEEEEECCH-HHHCSBT-TBCCCCGGGCSHHHHHHHHHHTCEEEEEEESC---CCTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEecch-hhcCCCC-CEecccchhhHHHHHHHHHHcCCEEEecCCcc---eeeecCCC---Cccc
Confidence 799999999999999999985 5667764 35654444569999999999999999952100 01111111 1122
Q ss_pred CC-----------hhHHHHHHHHHHHHHHHhCCC-----CceeEEEeecCCCCCCCC-hhHHHHHHHHHHHHHHhhCCCe
Q 013777 240 WG-----------DSNVADTVAVIDFLAARYANR-----PSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 240 w~-----------~~~~~~~~~~~~~lA~ry~~~-----~~v~g~eL~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
|- +.+.++..++++.|+++++.+ ..|+++++=||....... ...=+.|++.+.+..|+.+-..
T Consensus 131 WL~~~~~~lRt~~p~yl~~~~~~~~~l~~~~~~~~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~V 210 (1003)
T 3og2_A 131 WLQRVKGKLRTDAPDYLHATDNYVAHIASIIAKAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIV 210 (1003)
T ss_dssp GGGGCCSCTTSCCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCS
T ss_pred hhccCCCeecCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEcccccCcccccccCCCHHHHHHHHHHHHHcCCce
Confidence 21 567888888999999988755 478899999998642110 0013578888889999988888
Q ss_pred EEEEeCCC
Q 013777 303 YVIMSNRL 310 (436)
Q Consensus 303 ~Viv~~~~ 310 (436)
+++.++++
T Consensus 211 Pl~t~d~~ 218 (1003)
T 3og2_A 211 PLINNDAF 218 (1003)
T ss_dssp CBBCCBSS
T ss_pred EEEEcCCc
Confidence 88777644
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=98.54 E-value=2.8e-07 Score=96.07 Aligned_cols=136 Identities=20% Similarity=0.236 Sum_probs=93.8
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCC-CCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS-QNGNEHSATRDGFQ 238 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~-qng~~~sg~~~~~~ 238 (436)
+++++.||++|+|+||++|.| ...+|.+ +.|+=+....|+++++.|+++||+|||- ||- ..+.+..| +.+
T Consensus 35 ~d~l~kmKa~G~NtV~~yv~W-~~hEP~~-G~fdF~g~~dL~~fl~~a~~~Gl~Vilr----pGPYi~aEw~~G---G~P 105 (595)
T 4e8d_A 35 YHSLYNLKALGFNTVETYVAW-NLHEPCE-GEFHFEGDLDLEKFLQIAQDLGLYAIVR----PSPFICAEWEFG---GLP 105 (595)
T ss_dssp HHHHHHHHHTTCCEEEEECCH-HHHCSBT-TBCCCSGGGCHHHHHHHHHHTTCEEEEE----CCSCCCTTBGGG---GCC
T ss_pred HHHHHHHHHcCCCEEEEeccH-HHcCCCC-CeecccchhhHHHHHHHHHHcCCEEEEe----cCCceecccCCC---cCC
Confidence 799999999999999999984 5666754 4565444556999999999999999996 221 01111111 122
Q ss_pred CCC-----------hhHHHHHHHHHHHHHHHhCC-----CCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 239 EWG-----------DSNVADTVAVIDFLAARYAN-----RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 239 ~w~-----------~~~~~~~~~~~~~lA~ry~~-----~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
.|- +.+.++..++++.|+++.+. ...|+++++=||..... + =++|.+.+.+..|+.+-+.
T Consensus 106 ~WL~~~p~~lRt~~p~y~~~~~~~~~~l~~~l~~~~~~~GgpVI~~QvENEyG~~~-~---~~~Y~~~l~~~~~~~Gi~v 181 (595)
T 4e8d_A 106 AWLLTKNMRIRSSDPAYIEAVGRYYDQLLPRLVPRLLDNGGNILMMQVENEYGSYG-E---DKAYLRAIRQLMEECGVTC 181 (595)
T ss_dssp GGGGGSSSCSSSSCHHHHHHHHHHHHHHGGGTGGGBGGGTSCEEEEESSSSGGGTC-C---CHHHHHHHHHHHHHTTCCS
T ss_pred hhhccCCceeccCCHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEEEccccccccC-C---cHHHHHHHHHHHHHcCCcE
Confidence 232 45666666776666665443 35688999999986422 1 2567777777788888888
Q ss_pred EEEEeC
Q 013777 303 YVIMSN 308 (436)
Q Consensus 303 ~Viv~~ 308 (436)
+++.++
T Consensus 182 pl~t~d 187 (595)
T 4e8d_A 182 PLFTSD 187 (595)
T ss_dssp CEEEEE
T ss_pred EEEEcc
Confidence 888775
|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=7.7e-07 Score=100.00 Aligned_cols=123 Identities=20% Similarity=0.250 Sum_probs=89.5
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+.||+.||++|+|+||+. ++ +. + +++.++|.++||+|+-|+......+.. + ........
T Consensus 377 ~~dl~~~k~~g~N~iR~~-h~-----~~---~---------~~fydlcDelGilVw~e~~~~~~w~~~--~-~~~~~~~~ 435 (1032)
T 2vzs_A 377 ADKLKYVLNLGLNTVRLE-GH-----IE---P---------DEFFDIADDLGVLTMPGWECCDKWEGQ--V-NGEEKGEP 435 (1032)
T ss_dssp HHHHHHHHHTTCCEEEEE-SC-----CC---C---------HHHHHHHHHHTCEEEEECCSSSGGGTT--T-STTSSSCC
T ss_pred HHHHHHHHHcCCCEEECC-CC-----CC---c---------HHHHHHHHHCCCEEEEccccccccccc--C-CCCCcccc
Confidence 678999999999999982 11 11 1 467889999999999998432110000 0 00112245
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~ 310 (436)
|.+...+.+.+-++.+.+|+++||+|+.|.+.||+... ..+.+.+.+.||+.||+++++.+.++
T Consensus 436 ~~~~~~~~~~~~~~~~V~R~rNHPSIi~Ws~gNE~~~~-------~~~~~~~~~~~k~~DptRpv~~~s~~ 499 (1032)
T 2vzs_A 436 WVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPD-------RRIEQGYLDAMKAADFLLPVIPAASA 499 (1032)
T ss_dssp CCTTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCCC-------HHHHHHHHHHHHHTTCCSCEESCSSS
T ss_pred cChhHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCch-------HHHHHHHHHHHHHhCCCCeEEecCCC
Confidence 66666777888899999999999999999999999641 24566778899999999998876543
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=98.49 E-value=2.1e-06 Score=89.20 Aligned_cols=160 Identities=15% Similarity=0.169 Sum_probs=99.6
Q ss_pred HHHHHHHHhCCCCEEEec-------CccccccCCCC--CCC----C--ccchHHHHHHHHHHHHHcCCEEEEEcCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIP-------VGWWIANDPTP--PKP----F--VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS 224 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRip-------v~~~~~~~~~~--~~~----~--~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~ 224 (436)
.+-++.++++|+..||+| +.|.....|.. |.. | .+...--+|+++++|++.|+.+++.+-..++.
T Consensus 54 ~d~~~~l~~l~~~~iR~pGG~f~d~y~W~d~igp~~~Rp~~~~~~W~~~~~n~~g~def~~~~~~~g~ep~~~vn~g~~~ 133 (502)
T 1qw9_A 54 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTRG 133 (502)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSCC
T ss_pred HHHHHHHHhcCCCeEecCCCcccCcccccCCCCChHhCCCcccCCccccccCCCCHHHHHHHHHHcCCeEEEEEeCCCCC
Confidence 567888999999999999 23322222211 110 1 11111236999999999999999998653210
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHH--------HHHHHHHhCC-CC-ceeEEEeecCCCCC----CCChhHHHHHHHH
Q 013777 225 QNGNEHSATRDGFQEWGDSNVADTVAV--------IDFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYKA 290 (436)
Q Consensus 225 qng~~~sg~~~~~~~w~~~~~~~~~~~--------~~~lA~ry~~-~~-~v~g~eL~NEP~~~----~~~~~~~~~~~~~ 290 (436)
......++++ |..+-.+|.. .| .|--|||.|||... ..+.+.+.+.|.+
T Consensus 134 -----------------~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~v~yweiGNE~~g~w~~g~~t~~~Y~~~~~~ 196 (502)
T 1qw9_A 134 -----------------IDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIACE 196 (502)
T ss_dssp -----------------HHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHhCCCCCCcHHHHHHHcCCCCCCCCeEEEEeCCCCCCcCCCCcCHHHHHHHHHH
Confidence 1223333332 3445556653 34 67789999999842 2367889999999
Q ss_pred HHHHHHhhCCCeEEEEeCCCCC-----CCh-hhhhccCCCCCcEEEEEeecCc
Q 013777 291 GYDAVRKYTSTAYVIMSNRLGP-----ADH-KELLSFASGLSRVVIDVHYYNL 337 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv~~~~~~-----~~~-~~~~~~~~~~~nvv~~~H~Y~~ 337 (436)
.+++||+++|+..|+.++.... ..| ..++... ...-..+|+|+|..
T Consensus 197 ~a~aik~~dP~i~via~G~~~~~~p~~~~W~~~~l~~~-~~~vD~is~H~Y~~ 248 (502)
T 1qw9_A 197 AAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDHT-YDHVDYISLHQYYG 248 (502)
T ss_dssp HHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHH-GGGCSEEEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEeCCCcccCcccCchHHHHHHhc-ccCCCEEEEeeCCC
Confidence 9999999999987776532211 111 2233321 22346799999953
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=98.47 E-value=3.9e-06 Score=82.12 Aligned_cols=234 Identities=13% Similarity=0.106 Sum_probs=134.4
Q ss_pred HHHHHHH--hCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEE---EcCCCCCCCCCCCCCCC
Q 013777 161 EDFKFLS--SNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSAT 233 (436)
Q Consensus 161 ~d~~~ia--~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vil---DlH~~pg~qng~~~sg~ 233 (436)
.....+- ..-||.|-. -+- |...+|.++ .| .+...|++|++|+++||.|.- --|. |.+.+-..
T Consensus 27 ~~~~~~~~~~~~Fn~~t~eN~mK-W~~iep~~G-~~---~f~~~D~~v~~a~~~gi~vrGHtLvWh~----q~P~W~~~- 96 (327)
T 3u7b_A 27 QGEIDIINNKNEIGSITPENAMK-WEAIQPNRG-QF---NWGPADQHAAAATSRGYELRCHTLVWHS----QLPSWVAN- 96 (327)
T ss_dssp CHHHHHHTCTTTCCEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHTTTCEEEEEEEEEST----TCCHHHHT-
T ss_pred HHHHHHHHhHhhCCeEEECcccc-HHHhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEEeeeecCC----cCcHHHhc-
Confidence 3344555 567888875 233 334555442 33 467789999999999999863 2232 22212111
Q ss_pred CCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC--hhHH-----HHHHHHHHHHHHhhCCCeEEE
Q 013777 234 RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVI 305 (436)
Q Consensus 234 ~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Vi 305 (436)
..|. +...+...+.++.+++||++ .|..||++|||...... ...| ..|...++++.|+.+|+..++
T Consensus 97 ----~~~~~~~l~~~~~~~I~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~dP~a~L~ 170 (327)
T 3u7b_A 97 ----GNWNNQTLQAVMRDHINAVMGRYRG--KCTHWDVVNEALNEDGTYRDSVFLRVIGEAYIPIAFRMALAADPTTKLY 170 (327)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEE
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEEeccccCCCCCccccchhhhccHHHHHHHHHHHHhHCCCCeEE
Confidence 1233 45567788999999999997 57889999999853211 1112 258899999999999999999
Q ss_pred EeCCC-CCCCh---------hhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEe
Q 013777 306 MSNRL-GPADH---------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 375 (436)
Q Consensus 306 v~~~~-~~~~~---------~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~v 375 (436)
+.+-. ..... ..+.....+-+.+-+..|.....++......+ .+..+.. .+..+... |.+|.|
T Consensus 171 ~Ndyn~e~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p--~~~~~~~----~l~~~a~l-Gl~v~i 243 (327)
T 3u7b_A 171 YNDYNLEYGNAKTEGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTP--SRAKLAS----VLQGLADL-GVDVAY 243 (327)
T ss_dssp EEESSCTTCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCC--CHHHHHH----HHHHHHTT-TCEEEE
T ss_pred eccccccCCchhhHHHHHHHHHHHHCCCCcceEEEcccccccccccccCCCC--CHHHHHH----HHHHHHhc-CCceEE
Confidence 97521 11111 11111223467788999987521111001111 1222222 23334333 556999
Q ss_pred ecccccCCCC--CcCHHHHHHHHHHHHHHHcc--CCCcEEEEceec
Q 013777 376 GEWTCEWNVK--DASKQDYQRFANAQLDVYGR--ATFGWAYWAHKC 417 (436)
Q Consensus 376 GEwg~~~~~~--~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~ 417 (436)
+|+....... ....+...++++..+.++-+ ...|-++|.+..
T Consensus 244 TElDv~~~~p~~~~~~~~Qa~~y~~~~~~~~~~~~v~gIt~WG~~D 289 (327)
T 3u7b_A 244 TELDIRMNTPATQQKLQTNADAYARIVGSCMDVKRCVGITVWGISD 289 (327)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBG
T ss_pred EecccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCceEEEEEccCc
Confidence 9997654211 11122233444444444422 466999998766
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=98.43 E-value=4.8e-06 Score=86.68 Aligned_cols=160 Identities=12% Similarity=0.180 Sum_probs=99.0
Q ss_pred HHHHHHHHhCCCCEEEecC-------ccccccCCCC--CCC----C--ccchHHHHHHHHHHHHHcCCEEEEEcCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPV-------GWWIANDPTP--PKP----F--VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS 224 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv-------~~~~~~~~~~--~~~----~--~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~ 224 (436)
.+-++.++++|+..||+|= .|.....|.. |.. | .+...--+|+++++|++.|+.+++.+-...+
T Consensus 62 ~dl~~~l~~l~~~~iR~PGG~f~d~y~W~d~iGp~~~Rp~~~~~~W~~~~~n~~G~def~~~~~~~G~ep~~~vn~g~~- 140 (513)
T 2c7f_A 62 KDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTR- 140 (513)
T ss_dssp HHHHHHHHHHCCSEEEESCSTTGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCTHHHHHHHHHTTCEEEEECCCSSC-
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcceecCCCCChHhCCccccCCccceecCCCCHHHHHHHHHHcCCeEEEEEeCCCC-
Confidence 5678889999999999982 1211122211 110 1 1111124699999999999999998864211
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHH--------HHHHHHHhCC-CC-ceeEEEeecCCCCC----CCChhHHHHHHHH
Q 013777 225 QNGNEHSATRDGFQEWGDSNVADTVAV--------IDFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYKA 290 (436)
Q Consensus 225 qng~~~sg~~~~~~~w~~~~~~~~~~~--------~~~lA~ry~~-~~-~v~g~eL~NEP~~~----~~~~~~~~~~~~~ 290 (436)
. ......++++ |..+-+++.. .| .|--|||.|||... ..+.+.+.+.|.+
T Consensus 141 --------~--------~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~vkyweiGNE~~g~w~~g~~t~~~Y~~~~~~ 204 (513)
T 2c7f_A 141 --------G--------ISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAEE 204 (513)
T ss_dssp --------C--------HHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESCCCCCTTSTTCCCHHHHHHHHHH
T ss_pred --------C--------HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEeccCcccccccCCCCHHHHHHHHHH
Confidence 0 1222333332 3445556653 23 57779999999743 2367889999999
Q ss_pred HHHHHHhhCCCeEEEEeCCCCC-----CCh-hhhhccCCCCCcEEEEEeecCc
Q 013777 291 GYDAVRKYTSTAYVIMSNRLGP-----ADH-KELLSFASGLSRVVIDVHYYNL 337 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv~~~~~~-----~~~-~~~~~~~~~~~nvv~~~H~Y~~ 337 (436)
.+++||+++|+..|+.++.-.. ..| ..++... ...-..+|+|+|..
T Consensus 205 ~a~a~k~~dP~i~via~G~~~~~~~~~~~W~~~~l~~~-~~~vD~is~H~Y~~ 256 (513)
T 2c7f_A 205 TARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYA-YDYVDYISLHQYYG 256 (513)
T ss_dssp HHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHH-TTTCCEEEEEEEEC
T ss_pred HHHHHHHhCCCcEEEEeCCCCCCCcccCchHHHHHHhc-ccCCCEEEEeecCC
Confidence 9999999999987776532211 111 2233321 23457899999953
|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
Probab=98.33 E-value=5.5e-06 Score=86.96 Aligned_cols=160 Identities=15% Similarity=0.228 Sum_probs=98.8
Q ss_pred HHHHHHHHhCCCCEEEecC-------ccccccCCCCCCC------C--ccchHHHHHHHHHHHHHcCCEEEEEcCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPV-------GWWIANDPTPPKP------F--VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS 224 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv-------~~~~~~~~~~~~~------~--~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~ 224 (436)
.+-++.|+++|+-.||+|= .|.....|....| | .+...--+|+++++|++.|+.+++.+-..++.
T Consensus 94 ~Dv~~alk~L~~~~lR~PGG~f~d~Y~W~d~iGP~e~Rp~~~~~~W~~~e~n~fG~dEf~~~~~~~GaeP~i~vn~G~~~ 173 (574)
T 2y2w_A 94 QDVLDLVKELGVTCVRYPGGNFVSNYNWEDGIGPRENRPMRRDLAWHCTETNEMGIDDFYRWSQKAGTEIMLAVNMGTRG 173 (574)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEEECCSSCC
T ss_pred HHHHHHHHHhCCCEEeeCCCcccCcceecCCcCChhhCCCccccCccccccCCcCHHHHHHHHHHcCCEEEEEEeCCCCC
Confidence 5678889999999999983 2322222211011 1 11111227999999999999999998653210
Q ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHH--------HHHHHHHhCC-CC-ceeEEEeecCCCCC----CCChhHHHHHHHH
Q 013777 225 QNGNEHSATRDGFQEWGDSNVADTVAV--------IDFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYKA 290 (436)
Q Consensus 225 qng~~~sg~~~~~~~w~~~~~~~~~~~--------~~~lA~ry~~-~~-~v~g~eL~NEP~~~----~~~~~~~~~~~~~ 290 (436)
......++++ |..+-.++.. .| .|--|||-|||... ..+.+.+.+.|.+
T Consensus 174 -----------------~~ea~dwveY~n~~~~t~w~~lR~~~G~~ep~~vkyweIGNE~~g~W~~G~~t~e~Y~~~~~~ 236 (574)
T 2y2w_A 174 -----------------LKAALDELEYVNGAPGTAWADQRVANGIEEPMDIKMWCIGNEMDGPWQVGHMSPEEYAGAVDK 236 (574)
T ss_dssp -----------------HHHHHHHHHHHHCCTTSHHHHHHHHTTCCSCCCCCEEEESSCTTSTTSTTCCCHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCcceeEEEeccccccccccCCCCHHHHHHHHHH
Confidence 1222333332 3344445543 34 57789999999743 2457889999999
Q ss_pred HHHHHHhhCCCeEEEEeCCCCC-----CCh-hhhhccCCCCCcEEEEEeecCc
Q 013777 291 GYDAVRKYTSTAYVIMSNRLGP-----ADH-KELLSFASGLSRVVIDVHYYNL 337 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv~~~~~~-----~~~-~~~~~~~~~~~nvv~~~H~Y~~ 337 (436)
.+++||+++|+..|+.++.-.. ..| ..++... ...-..+|+|+|..
T Consensus 237 ~a~AiK~vdP~i~via~G~~~~~~p~~~~W~~~~l~~~-~~~vD~vs~H~Y~~ 288 (574)
T 2y2w_A 237 VAHAMKLAESGLELVACGSSGAYMPTFGTWEKTVLTKA-YENLDFVSCHAYYF 288 (574)
T ss_dssp HHHHHHHHCTTCEEEEECCSCTTSTTTTHHHHHHHHHH-GGGCCEEEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEecCCcccCccccchHHHHHHhc-ccCCCEEEEeecCC
Confidence 9999999999987776643211 112 1222221 12345799999953
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.7e-05 Score=77.69 Aligned_cols=224 Identities=11% Similarity=0.106 Sum_probs=131.0
Q ss_pred hCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEE---EcCCCCCCCCCCCCCCCCCCCCCCC-
Q 013777 168 SNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSATRDGFQEWG- 241 (436)
Q Consensus 168 ~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vil---DlH~~pg~qng~~~sg~~~~~~~w~- 241 (436)
..-||.|.. .+-|. ..+|.++ .| .+...|+++++|+++||.|.- --| +|.+.+-.. ..|.
T Consensus 38 ~~~Fn~~t~eN~mKW~-~~ep~~G-~~---~f~~aD~~v~~a~~~gi~vrGHtLvWh----~q~P~W~~~-----~~~~~ 103 (335)
T 4f8x_A 38 KQNFGEITPANAMKFM-YTETEQN-VF---NFTEGEQFLEVAERFGSKVRCHNLVWA----SQVSDFVTS-----KTWTA 103 (335)
T ss_dssp HHHCSEEEESSTTSGG-GTEEETT-EE---CCHHHHHHHHHHHHTTCEEEEEEEECS----SSCCHHHHT-----SCCCH
T ss_pred HHhCCEEEECCccchH-HhCCCCC-cc---CcchhHHHHHHHHHCCCEEEEeeeccc----ccCcHHHhc-----CCCCH
Confidence 336999987 66654 3444332 23 467899999999999999742 223 222222110 1233
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC--hhHH-----HHHHHHHHHHHHhh-----CCCeEEEEeCC
Q 013777 242 DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKY-----TSTAYVIMSNR 309 (436)
Q Consensus 242 ~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~-----~p~~~Viv~~~ 309 (436)
+...+...+.++.+++||++ .|..||++|||...... ...| ..|...++++.|+. +|+..+++.+-
T Consensus 104 ~~l~~~~~~~I~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~~~~dP~a~L~~NDY 181 (335)
T 4f8x_A 104 KELTAVMKNHIFKTVQHFGR--RCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALAQIGANDVKLYYNDY 181 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHGG--GCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHhCC--CceEEEEecCccCCCCccccCchhhhcCHHHHHHHHHHHHHhccccCCCCcEEEEecc
Confidence 45677888999999999997 68889999999853211 1112 26888999999999 99999998742
Q ss_pred C-CCCCh---------hhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeeccc
Q 013777 310 L-GPADH---------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWT 379 (436)
Q Consensus 310 ~-~~~~~---------~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg 379 (436)
. ..... ..+..-..+-+.+-+..|...... .+.+ .+.. .+..+... |.+|.|+|+-
T Consensus 182 n~e~~~~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~-----p~~~----~~~~----~l~~~a~l-Gl~v~iTElD 247 (335)
T 4f8x_A 182 GIENPGTKSTAVLQLVSNLRKRGIRIDGVGLESHFIVGET-----PSLA----DQLA----TKQAYIKA-NLDVAVTELD 247 (335)
T ss_dssp SCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCC-----CCHH----HHHH----HHHHHHHT-TCEEEEEEEE
T ss_pred cccCCcHhHHHHHHHHHHHHHCCCCcceeeeeeeecCCCC-----CCHH----HHHH----HHHHHHHc-CCeeEEeecc
Confidence 1 11111 111122234677889999764211 1222 2221 22333334 5569999997
Q ss_pred ccCCCCCc-CH---HHHHHHHHHHHHHHcc---CCCcEEEEceecCCCCC
Q 013777 380 CEWNVKDA-SK---QDYQRFANAQLDVYGR---ATFGWAYWAHKCEANHW 422 (436)
Q Consensus 380 ~~~~~~~~-~~---~~~~~~~~~q~~~~~~---~~~Gw~~W~~k~~~~~W 422 (436)
........ +. +...+.++..+.++-+ ...|-++|.+.. ...|
T Consensus 248 i~~~~~p~~~~~~~~~Qa~~y~~~~~~~~~~~~~v~git~WG~~D-~~sW 296 (335)
T 4f8x_A 248 VRFSTVPYYTAAAQKQQAEDYYVSVASCMNAGPRCIGVVVWDFDD-AYSW 296 (335)
T ss_dssp EEBSSSCCSSHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBG-GGCS
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHHHHHHhCcCCeeEEEEEcCcc-CCcc
Confidence 64321111 11 2223334444444322 456999998876 3344
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=2.6e-05 Score=81.50 Aligned_cols=241 Identities=13% Similarity=0.104 Sum_probs=129.3
Q ss_pred HHHHHhCCCCEEEec--CccccccCCCCCC-CCc-cchHHHHHHHHHHHHHcCCEEE---EEcCCCCCCCCCCCCCC-CC
Q 013777 163 FKFLSSNGINAVRIP--VGWWIANDPTPPK-PFV-GGSSKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSA-TR 234 (436)
Q Consensus 163 ~~~ia~~G~N~VRip--v~~~~~~~~~~~~-~~~-~~~l~~ld~~v~~a~~~Gi~Vi---lDlH~~pg~qng~~~sg-~~ 234 (436)
...+-..-||.|..- +-|. ..+|.++. .+. .=.+...|++|++|+++||+|. |--|. |.+.+-.. ..
T Consensus 208 ~~~~~~~~Fn~it~eN~mKw~-~~e~~~g~~~~~~~~~f~~aD~~v~~A~~ngi~vrGHtLvWhs----q~P~W~~~~~~ 282 (540)
T 2w5f_A 208 IKALILREFNSITCENEMKPD-ATLVQSGSTNTNIRVSLNRAASILNFCAQNNIAVRGHTLVWHS----QTPQWFFKDNF 282 (540)
T ss_dssp HHHHHHHHCSEEEESSTTSHH-HHEEEEEEETTEEEECCTTTHHHHHHHHHTTCEEEEEEEECSS----SCCGGGGBTTS
T ss_pred HHHHHHHhCCeeccccccccc-ccccCCCCccccceechhHHHHHHHHHHHCCCEEEEEEEEcCC----CCchHHhccCc
Confidence 344444589999862 3332 22232210 000 0135678999999999999984 22343 22222211 00
Q ss_pred CCCCCC-C-hhHHHHHHHHHHHHHHHhCCC-C--ceeEEEeecCCCCCCC---------C-------hhHHH------HH
Q 013777 235 DGFQEW-G-DSNVADTVAVIDFLAARYANR-P--SLAAIELINEPLAPGV---------A-------LDTLK------SY 287 (436)
Q Consensus 235 ~~~~~w-~-~~~~~~~~~~~~~lA~ry~~~-~--~v~g~eL~NEP~~~~~---------~-------~~~~~------~~ 287 (436)
+....+ . +...++..++++.++.||+++ | .|.+||++|||..... . ...|. .|
T Consensus 283 ~~~g~~~~~~~l~~~l~~~I~~vv~ry~g~y~~~~i~~WDVvNE~~~~~~~~~~~~g~~r~~~~~~~~s~w~~~~G~~~~ 362 (540)
T 2w5f_A 283 QDNGNWVSQSVMDQRLESYIKNMFAEIQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGDNKF 362 (540)
T ss_dssp STTSCBCCHHHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEEESCSCSCHHHHHHSTTCCCBSSBTTBBHHHHHHSSTTH
T ss_pred ccccCcCCHHHHHHHHHHHHHHHHHHhcccCCCCcEEEEEEecCcccCCccccccccccccccccccCCHHHHhhCcHHH
Confidence 001111 1 234667778999999999874 4 4999999999986330 0 12333 68
Q ss_pred HHHHHHHHHhhCCC-eEEEEeCCCCCCCh---h---hhhc-c--CCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHh
Q 013777 288 YKAGYDAVRKYTST-AYVIMSNRLGPADH---K---ELLS-F--ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQ 357 (436)
Q Consensus 288 ~~~~~~aIR~~~p~-~~Viv~~~~~~~~~---~---~~~~-~--~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~ 357 (436)
+..+++..|+.+|+ ..+++.+ +..... . .+.. + ..-.+.+-+..|.-.... .+ .+. ..++.
T Consensus 363 i~~aF~~Ar~~dP~~a~L~~ND-yn~~~~~k~~~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~-~~--~~~----~~~~~- 433 (540)
T 2w5f_A 363 IEKAFTYARKYAPANCKLYYND-YNEYWDHKRDCIASICANLYNKGLLDGVGMQSHINADMN-GF--SGI----QNYKA- 433 (540)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEE-SSTTSHHHHHHHHHHHHHHHHTTCCCEEEECCEEESCSS-ST--TCH----HHHHH-
T ss_pred HHHHHHHHHHhCCccceEEEEe-cccccccHHHHHHHHHHHHHhCCcccEEEEeeEecCCCC-CC--CCH----HHHHH-
Confidence 99999999999997 7788764 211111 1 1111 1 111455566688754210 01 112 22222
Q ss_pred hhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHc--------cCCCcEEEEceecCCCCC
Q 013777 358 RASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYG--------RATFGWAYWAHKCEANHW 422 (436)
Q Consensus 358 ~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~--------~~~~Gw~~W~~k~~~~~W 422 (436)
.+..+... +.+|.|+|+.........+.+...++++..++++- ....|-++|.+.. ...|
T Consensus 434 ---~l~~~a~~-Gl~i~iTElDi~~~~~~~~~~~QA~~y~~~~~~~~~~~~~~~~~~v~git~WG~~D-~~sW 501 (540)
T 2w5f_A 434 ---ALQKYINI-GCDVQITELDISTENGKFSLQQQADKYKAVFQAAVDINRTSSKGKVTAVCVWGPND-ANTW 501 (540)
T ss_dssp ---HHHHHHTT-TSEEEEEEEEEECTTTTSCHHHHHHHHHHHHHHHHHHHHHCCSSCEEEEEESSSST-TSCT
T ss_pred ---HHHHHHhc-CCcEEEEeeeecCCCCCchHHHHHHHHHHHHHHHHhhhccccCCceeEEEEEcCCC-CCcc
Confidence 22233333 55699999986543211223333344444444431 1346889999876 3455
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.11 E-value=0.0004 Score=72.00 Aligned_cols=205 Identities=12% Similarity=0.082 Sum_probs=113.5
Q ss_pred HHHHHHHHHHcCC-EEEEEcCCCCCCC--CCCCCCCCCCCC-CCCChhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCC
Q 013777 200 LDNAFDWAEKYGV-KVIVDLHAAPGSQ--NGNEHSATRDGF-QEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEP 274 (436)
Q Consensus 200 ld~~v~~a~~~Gi-~VilDlH~~pg~q--ng~~~sg~~~~~-~~w~~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP 274 (436)
...+++.|+++|. +++...-.+|+.. |+... +. .+. ....+++.+.+.+++...+++|+.+- .|.++.+.|||
T Consensus 110 ~~~~lk~A~~~~~~~i~aspWSpP~wMk~ng~~~-~~-~g~~~~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP 187 (507)
T 3clw_A 110 QQWFMKAARERGMNNFLFFTNSAPYFMTRSASTV-ST-DQDCINLQNDKFDDFARFLVKSAQHFREQGFHVNYISPNNEP 187 (507)
T ss_dssp HHHHHHHHHHTTCCCEEEECSSCCGGGSSSSSSS-CC-CSSSCSSCTTCHHHHHHHHHHHHHHHHHTTCCEEEEECCSCT
T ss_pred HHHHHHHHHHcCCCeEEEeCCCCcHHhccCCCcc-CC-CCccccCChHHHHHHHHHHHHHHHHHHHcCCceeEeeeecCC
Confidence 3457788888887 6777777777642 22111 10 011 01124667778888888888887553 57889999999
Q ss_pred --CCC--------CCChhHHHHHHHHHHHHHHhhCCCeEEEEeC--CC-----------CCCCh-hhhhcc-----CCCC
Q 013777 275 --LAP--------GVALDTLKSYYKAGYDAVRKYTSTAYVIMSN--RL-----------GPADH-KELLSF-----ASGL 325 (436)
Q Consensus 275 --~~~--------~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~--~~-----------~~~~~-~~~~~~-----~~~~ 325 (436)
... ..+++...+|.+.+..++++.+.+..|++.+ .| ....+ ..+.+. ..+.
T Consensus 188 ~~~~~~~~~~es~~~t~~~~a~fik~L~p~l~~~g~~~kI~~~d~~~~~~~~d~~n~~~~~~~~~~~~~d~~a~~yv~g~ 267 (507)
T 3clw_A 188 NGQWHANSFQEGSFATKADLYRMVEELDKAISEAQIDTKILIPEVGDMKYLFEIDSIAKTPDDIIHSMFYKDGQYSVLKF 267 (507)
T ss_dssp TSCGGGCCSSCCCCCCHHHHHHHHHHHHHHHHHHTCSCEEEEEEESSGGGGSCCCSCTTCCCCHHHHHHSTTSTTCCTTC
T ss_pred ccccccCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEeccccccccccccccccchhhHHHhhcCcchHhhhhcc
Confidence 421 1356788899999999999999877777662 11 00111 112221 1222
Q ss_pred Cc--EEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhc--CCCeEEeeccccc---CC-CCCcCH----HHHH
Q 013777 326 SR--VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTS--NGPLTFVGEWTCE---WN-VKDASK----QDYQ 393 (436)
Q Consensus 326 ~n--vv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~--~~p~v~vGEwg~~---~~-~~~~~~----~~~~ 393 (436)
.+ .++.+|.|... .+. ..+..++. .+..+.+. .+++++.+|.+.. +. ..+... +.-.
T Consensus 268 ~~~~diia~H~Y~~~------~~~-~~l~~~r~----~~~~~a~~~~~~k~lw~TE~~~~g~~~~~~~~~~~~~~~~~a~ 336 (507)
T 3clw_A 268 KNLFNCVAAHDYWSA------YPA-TLLVDIRN----RIHKELSANGHNTKFWASEYCILEKNEEITMPASPERSINLGL 336 (507)
T ss_dssp TTEEEEEEECCTTCS------SSH-HHHHHHHH----HHHHHHHTTSSCCEEEECCCCSCCCCTTTCSSSCHHHHHHHHH
T ss_pred ccccceEEEeeCCCC------CCc-chhhhHHH----HHHHHHhhccCCCceEEeeeccCCCCcccccCCCCcccHHHHH
Confidence 23 35899999531 111 22222221 12222233 3677999999751 11 001111 1222
Q ss_pred HHHHHHHHHHcc-CCCcEEEEceec
Q 013777 394 RFANAQLDVYGR-ATFGWAYWAHKC 417 (436)
Q Consensus 394 ~~~~~q~~~~~~-~~~Gw~~W~~k~ 417 (436)
.+.+....-+.. ..-+|.+|..-.
T Consensus 337 ~~a~~i~~~l~~~~~~a~~~Wn~~~ 361 (507)
T 3clw_A 337 YVARIIHNDLTLANASAWQWWTAVS 361 (507)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEESEE
T ss_pred HHHHHHHHHHHhCCCcEEEEchhhc
Confidence 334444343444 567999998876
|
| >3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A | Back alignment and structure |
|---|
Probab=98.10 E-value=1.4e-05 Score=82.31 Aligned_cols=155 Identities=15% Similarity=0.232 Sum_probs=97.3
Q ss_pred HHHHHHHHhCCCCEEEecCc-------cccccCCCCCCC------C--cc-chHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVG-------WWIANDPTPPKP------F--VG-GSSKVLDNAFDWAEKYGVKVIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~-------~~~~~~~~~~~~------~--~~-~~l~~ld~~v~~a~~~Gi~VilDlH~~pg 223 (436)
.+-++.|++++.-.||.|=+ |.....|....| | .+ ..+ -+|+++++|++.|..+++-+-...|
T Consensus 71 ~dv~~alk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~~n~f-G~~Ef~~~~e~~gaep~~~vN~G~g 149 (504)
T 3ug3_A 71 KDVLEAVKRIKVPNLRWPGGNFVSNYHWEDGIGPKDQRPVRFDLAWQQEETNRF-GTDEFIEYCREIGAEPYISINMGTG 149 (504)
T ss_dssp HHHHHHHHHTTCSEEEESCSGGGGGCCGGGGCSSGGGSCCEEETTTTEEECCCS-CHHHHHHHHHHHTCEEEEECCCSSC
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcchhccCcCChHHCCCCcccCcccccCCCC-CHHHHHHHHHHhCCeEEEEEECCCC
Confidence 56788899999999999932 332233321011 1 11 112 2799999999999999998754211
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHH-----------HHhCC-CC-ceeEEEeecCCCCC----CCChhHHHH
Q 013777 224 SQNGNEHSATRDGFQEWGDSNVADTVAVIDFLA-----------ARYAN-RP-SLAAIELINEPLAP----GVALDTLKS 286 (436)
Q Consensus 224 ~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA-----------~ry~~-~~-~v~g~eL~NEP~~~----~~~~~~~~~ 286 (436)
..+.+.++++++. ..... .| .|--|||-|||... ..+.+.+.+
T Consensus 150 --------------------~~~ea~d~veY~n~~~~t~~~~lRa~~G~~~P~~vkyweiGNE~~G~~q~G~~t~e~Y~~ 209 (504)
T 3ug3_A 150 --------------------TLDEALHWLEYCNGKGNTYYAQLRRKYGHPEPYNVKFWGIGNEMYGEWQVGHMTADEYAR 209 (504)
T ss_dssp --------------------CHHHHHHHHHHHHCCSSCHHHHHHHHTTCCSCCCCCEEEECSSTTSTTSTTCCCHHHHHH
T ss_pred --------------------CHHHHHHHHHHhcCCCCChHHHHHHHcCCCCCCCccEEEecCcccccccccCCCHHHHHH
Confidence 1233344443332 22211 23 57779999999753 245788999
Q ss_pred HHHHHHHHHHhhCCCeEEEEeCCCCCCCh-hhhhccCCCCCcEEEEEeecCc
Q 013777 287 YYKAGYDAVRKYTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNL 337 (436)
Q Consensus 287 ~~~~~~~aIR~~~p~~~Viv~~~~~~~~~-~~~~~~~~~~~nvv~~~H~Y~~ 337 (436)
.|.+.+++||+.+|+..|+.++... ..| ..++... ...-..+|.|+|..
T Consensus 210 ~~~~~a~Aik~~dP~I~lia~G~~~-~~W~~~~l~~~-~~~vD~vs~H~Y~~ 259 (504)
T 3ug3_A 210 AAKEYTKWMKVFDPTIKAIAVGCDD-PIWNLRVLQEA-GDVIDFISYHFYTG 259 (504)
T ss_dssp HHHHHHHHHHHHCTTCEEEECCCSC-HHHHHHHHHHH-TTTCSEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCcEEEEECCCC-cchhHHHHHhc-ccCCCEEEEeeCCC
Confidence 9999999999999998777654221 112 2223321 23456799999974
|
| >3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=4.8e-05 Score=78.52 Aligned_cols=197 Identities=17% Similarity=0.181 Sum_probs=112.4
Q ss_pred HHHHHHHHhCCC-CEEEecCcc-----cc-ccCCCCCCC---C--c-------cc--hHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGI-NAVRIPVGW-----WI-ANDPTPPKP---F--V-------GG--SSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~-N~VRipv~~-----~~-~~~~~~~~~---~--~-------~~--~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
++-++.++++|. -.||+-=.+ |. ...|....| . . .. .-..+|++.++|++-|..+|+.+
T Consensus 60 ~~v~~l~k~L~~~~~lR~GG~~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~~~~~~~def~~f~~~~G~~~~~~l 139 (488)
T 3vny_A 60 TQLAGFLRTLGRQGVLRIGGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLDKTGWKLIYGL 139 (488)
T ss_dssp HHHHHHHHHHCSSCEEEEESGGGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEEECHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEeCccccceEEEcCCCCCcccCcccccCcchhhccccCceeCHHHHHHHHHHHHHhCCEEEEEE
Confidence 567888899999 999992111 21 111110011 0 0 11 23459999999999999999988
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC--------CCCChhHHHHHHHH
Q 013777 219 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--------PGVALDTLKSYYKA 290 (436)
Q Consensus 219 H~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~--------~~~~~~~~~~~~~~ 290 (436)
-...+ +.+.+.+.++.....-+ .-.|..|||-|||.. ...+++.+.+.+.+
T Consensus 140 N~g~~--------------------~~~~a~~~v~y~~~~~~-~~~l~~welGNEpd~~~~~G~~~~~~t~~~Y~~~~~~ 198 (488)
T 3vny_A 140 NLGKG--------------------TPENAADEAAYVMETIG-ADRLLAFQLGNEPDLFYRNGIRPASYDFAAYAGDWQR 198 (488)
T ss_dssp CTTTS--------------------CHHHHHHHHHHHHHHHC-TTTEEEEEESSCGGGHHHHSSSCTTCCHHHHHHHHHH
T ss_pred eCCCC--------------------CHHHHHHHHHHHhhccc-CCceeEEEecCcccccccCCccCCCCCHHHHHHHHHH
Confidence 75211 12344555555544222 237888999999962 13467788888899
Q ss_pred HHHHHHhhCCCeEEEEeCCCCCCCh-hhhhccCCCCCcEEEEEeecCcCCCC-CCCCChhh------hHHHHHHhhhhhH
Q 013777 291 GYDAVRKYTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNN-FNGLNVQQ------NIDYVNNQRASDL 362 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv~~~~~~~~~-~~~~~~~~~~~nvv~~~H~Y~~~~~~-~~~~~~~~------~i~~i~~~~~~~~ 362 (436)
..++||+.+|+..++.++..+...+ ..++.. ....-..++.|+|.. ++. ....+.+. .++.+. +.+
T Consensus 199 ~a~a~k~~~p~~~l~gp~~~~~~~w~~~~l~~-~~~~vd~vS~H~Y~~-g~~~~~~~t~~~ll~~~~~l~~~~----~~~ 272 (488)
T 3vny_A 199 FFTAIRKRVPNAPFAGPDTAYNTKWLVPFADK-FKHDVKFISSHYYAE-GPPTDPSMTIERLMKPNPRLLGET----AGL 272 (488)
T ss_dssp HHHHHHHHCTTCCEEEEEESSCGGGHHHHHHH-TGGGCSEEEEEEEEE-CCTTCTTCCHHHHTSCCHHHHHHH----HHH
T ss_pred HHHHHHhhCCCCeEEeCCCCCCchhhHHHHHh-cCccCCEEEEeeCCC-CCCCCCCcCHHHHcCchHHHHHHH----HHH
Confidence 9999999999876544431111122 333332 223345789999964 211 11111111 122211 122
Q ss_pred HHhhhcCCCeEEeecccccCC
Q 013777 363 GAVTTSNGPLTFVGEWTCEWN 383 (436)
Q Consensus 363 ~~~~~~~~p~v~vGEwg~~~~ 383 (436)
....+..++|+++||++....
T Consensus 273 ~~~~~~~g~p~~lgEtnsa~~ 293 (488)
T 3vny_A 273 KQVEADTGLPFRLTETNSCYQ 293 (488)
T ss_dssp HHHHHHHCCCEEEEEEEEEST
T ss_pred HHHHhcCCCCEEEeccccCCC
Confidence 222334477799999987543
|
| >2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A | Back alignment and structure |
|---|
Probab=98.04 E-value=3.9e-05 Score=79.43 Aligned_cols=159 Identities=14% Similarity=0.185 Sum_probs=94.6
Q ss_pred HHHHHHHHhCCCCEEEecCc-------cccccCCCC--CCC----C---ccc-hHHHHHHHHHHHHHcCCEEEEEcCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVG-------WWIANDPTP--PKP----F---VGG-SSKVLDNAFDWAEKYGVKVIVDLHAAP 222 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~-------~~~~~~~~~--~~~----~---~~~-~l~~ld~~v~~a~~~Gi~VilDlH~~p 222 (436)
.+-++.|+++|+-.||.|=+ |.....|.. |.. | .+. .+ -+|+++++|++.|..+++.+-...
T Consensus 54 ~dv~~~lk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~e~n~f-G~~Ef~~~~~~~gaep~~~vn~g~ 132 (496)
T 2vrq_A 54 NDVLEALKQMKIPVLRWPGGCFADEYHWKDGVGPREKRKRMVNTHWGGVIENNHF-GTHEFMMLCELLGCEPYISGNVGS 132 (496)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGTCCGGGGCSCGGGCCCCEETTTTSEECCCCS-CHHHHHHHHHHHTCEEEEEECCSS
T ss_pred HHHHHHHHhcCCCeEEeCCCccccceeecCCcCChHHCCCccCCCCCcccccCcc-CHHHHHHHHHHcCCeEEEEEECCC
Confidence 56788899999999999853 222222311 111 1 011 11 148999999999999999886521
Q ss_pred CCCCCCCCCCCCCCCCCCChhHHHHHHHH--------HHHHHHHhCC-CC-ceeEEEeecCCCCC--CCChhHHHHHHHH
Q 013777 223 GSQNGNEHSATRDGFQEWGDSNVADTVAV--------IDFLAARYAN-RP-SLAAIELINEPLAP--GVALDTLKSYYKA 290 (436)
Q Consensus 223 g~qng~~~sg~~~~~~~w~~~~~~~~~~~--------~~~lA~ry~~-~~-~v~g~eL~NEP~~~--~~~~~~~~~~~~~ 290 (436)
| . ......++++ |..+-.++.. .| .|--|||-|||... ..+.+.+.+.|.+
T Consensus 133 g---------~--------~~ea~d~veY~n~~~~t~w~~lRa~~G~~eP~~vkyweiGNE~~g~~g~~~~~~Y~~~~~~ 195 (496)
T 2vrq_A 133 G---------T--------VQEMSEWVEYITFDGESPMANWRRENGREKPWRIKYWGVGNQNWGCGGNMRAEYYADLYRQ 195 (496)
T ss_dssp C---------C--------HHHHHHHHHHHHCCSBSHHHHHHHHTTCCSCCCCCEEEECSCTTTTTTCCCHHHHHHHHHH
T ss_pred C---------c--------HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEEcCcccccCCCCCHHHHHHHHHH
Confidence 1 0 1222222322 2334344432 22 47779999999752 2456788889999
Q ss_pred HHHHHHhh-CCCeEEEEeCCCCC-CCh-hhhhccCCCCCcEEEEEeecCc
Q 013777 291 GYDAVRKY-TSTAYVIMSNRLGP-ADH-KELLSFASGLSRVVIDVHYYNL 337 (436)
Q Consensus 291 ~~~aIR~~-~p~~~Viv~~~~~~-~~~-~~~~~~~~~~~nvv~~~H~Y~~ 337 (436)
..++||++ +|+..||.++.... ..| ..++... ...-..+|.|+|..
T Consensus 196 ~a~a~k~~~dp~i~~ia~G~~~~~~~W~~~~l~~~-~~~~D~vs~H~Y~~ 244 (496)
T 2vrq_A 196 FQTYLRNYGDNKLHKIACGANTADYHWTEVLMKQA-APFMHGLSLHYYTV 244 (496)
T ss_dssp HHHTCCCCTTCCCEEEEEEEETTCHHHHHHHHHHH-GGGCSEEEEEEEEC
T ss_pred HHHHHHhCCCCCeEEEEeCCCCCCcchHHHHHHhC-CCCCCEEEEeecCC
Confidence 99999999 78766665432111 112 2233221 12345799999964
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.98 E-value=5.3e-05 Score=74.12 Aligned_cols=134 Identities=20% Similarity=0.211 Sum_probs=94.4
Q ss_pred HHHHHHHHhCCCCEEEecC-cc--ccccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPV-GW--WIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 233 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv-~~--~~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~ 233 (436)
+++|+.||++|++.|=|.- ++ +... |.. .........+.|+.+++.|+++||+|.+.|+..+. +++.+
T Consensus 57 ~~~~~~mK~~GikyvIl~~~~~~gf~~~-pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~----~W~~~- 130 (340)
T 4h41_A 57 DLDFQHMKRIGIDTVIMIRSGYRKFMTY-PSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDSGR----YWDTG- 130 (340)
T ss_dssp HHHHHHHHHTTCCEEEESCSEETTEESS-CCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBCSH----HHHHS-
T ss_pred HHHHHHHHHcCCCEEEEEEEeeCCeecc-CcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCChh----hcCCC-
Confidence 7899999999999885532 11 1110 100 00111124577999999999999999999874321 12111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhC-CCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 234 RDGFQEWGDSNVADTVAVIDFLAARYA-NRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 234 ~~~~~~w~~~~~~~~~~~~~~lA~ry~-~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
+.....+....+++.|.++|. ++|++.||-|-||+... ......+++.+.+.++++.+..++++++
T Consensus 131 ------d~~~e~e~~~~~i~El~~~Yg~~h~af~GWYi~~Ei~~~---~~~~~~~~~~l~~~lk~ls~~lp~~ISp 197 (340)
T 4h41_A 131 ------DLSWEIEDNKYVIDEVWKMYGEKYKSFGGWYISGEISRA---TKGAIDAFRAMGKQCKDISNGLPTFISP 197 (340)
T ss_dssp ------CGGGGHHHHHHHHHHHHHHTTTTCTTEEEEEECCCCSSC---CTTHHHHHHHHHHHHHHHTTSCCEEECC
T ss_pred ------CHHHHHHHHHHHHHHHHHHhhccCCCeeEEEeccccCch---hhhHHHHHHHHHHHHHHhcCCCceEEee
Confidence 112346677788999999997 68999999999999742 2345778999999999999998898875
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0002 Score=71.67 Aligned_cols=206 Identities=14% Similarity=0.092 Sum_probs=116.3
Q ss_pred CCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCC--CCCCCCCCCCCCCCCChhHHH
Q 013777 169 NGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ--NGNEHSATRDGFQEWGDSNVA 246 (436)
Q Consensus 169 ~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~q--ng~~~sg~~~~~~~w~~~~~~ 246 (436)
+|++.+|+|++--. ..|.. -..+++.|+++|++++...-.+|+.. |+.... .+. ..+++.+
T Consensus 45 ~g~s~~R~~ig~~~-------~~~~~-----~~~~~k~A~~~~~~i~aspWSpP~wMk~n~~~~~---~g~--L~~~~~~ 107 (383)
T 2y24_A 45 IGLSIMRVRIDPDS-------SKWNI-----QLPSARQAVSLGAKIMATPWSPPAYMKSNNSLIN---GGR--LLPANYS 107 (383)
T ss_dssp CCCCEEEEEECSSG-------GGGGG-----GHHHHHHHHHTTCEEEEEESCCCGGGBTTSSSBS---CCB--BCGGGHH
T ss_pred ccceEEEEecCCcc-------ccccc-----chHHHHHHHhcCCeEEEecCCCcHHHhCCCCCCC---CCc--CCHHHHH
Confidence 89999999996310 12221 13456778889999999888888742 221110 111 1246777
Q ss_pred HHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC------CChhHHHHHHHHHHHHHHhhCCCeEEEEeCC--CCCCCh-h
Q 013777 247 DTVAVIDFLAARYANRP-SLAAIELINEPLAPG------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNR--LGPADH-K 316 (436)
Q Consensus 247 ~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~------~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~--~~~~~~-~ 316 (436)
.+.+++...+++|+++- .|.++.+.|||.... .+.+...+|.+.....+++ ..|++++. |. .++ .
T Consensus 108 ~yA~Yl~k~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~t~~~~~~fik~~~~~~~~----~kI~~~d~~~~d-~~~~~ 182 (383)
T 2y24_A 108 AYTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGSKFGS----LKVIVAESLGFN-PALTD 182 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGGGSTT----SEEEEEEETTCC-GGGTH
T ss_pred HHHHHHHHHHHHHHHcCCCeEEecccccCCCCCCCCccCcCHHHHHHHHHHhhhhhcC----CEEEeecccccc-hhcch
Confidence 78888888888887653 578899999998631 2356666776654333322 44555432 22 111 1
Q ss_pred hhh-ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHH
Q 013777 317 ELL-SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRF 395 (436)
Q Consensus 317 ~~~-~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~ 395 (436)
..+ +......-..+.+|.|..- .... ..+ +..+++++.+|.++.......+...-..+
T Consensus 183 ~~l~d~~a~~~v~~i~~H~Y~~~---~~~~------~~~------------~~~~k~lw~TE~~~~~~~~~~~w~~~~~~ 241 (383)
T 2y24_A 183 PVLKDSDASKYVSIIGGHLYGTT---PKPY------PLA------------QNAGKQLWMTEHYVDSKQSANNWTSAIEV 241 (383)
T ss_dssp HHHTCHHHHTTCCEEEEECTTSC---CCCC------HHH------------HHTTCEEEEEEECSCTTSCTTCHHHHHHH
T ss_pred hhccCHhHHhhccEEEEecCCCC---cccc------hhh------------hcCCCeEEEeccccCCCcccCchhHHHHH
Confidence 111 1101122357899999541 1110 110 22356799999875321112233434455
Q ss_pred HHHHHHHHccCCCcEEEEceec
Q 013777 396 ANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 396 ~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
.+.....+..+-.+|.+|....
T Consensus 242 a~~i~~~l~~~~~~~~~W~~~~ 263 (383)
T 2y24_A 242 GTELNASMVSNYSAYVWWYIRR 263 (383)
T ss_dssp HHHHHHHHHTTCSEEEEEESBS
T ss_pred HHHHHHHHhcCccEEEEeeccC
Confidence 5555565655556999998853
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00045 Score=71.40 Aligned_cols=233 Identities=17% Similarity=0.173 Sum_probs=127.7
Q ss_pred HhCCCCEEEecCcc-------ccccCCCCC----CCCccchH--HHHHHHHHHHHHc---CCEEEEEcCCCCCCC--CCC
Q 013777 167 SSNGINAVRIPVGW-------WIANDPTPP----KPFVGGSS--KVLDNAFDWAEKY---GVKVIVDLHAAPGSQ--NGN 228 (436)
Q Consensus 167 a~~G~N~VRipv~~-------~~~~~~~~~----~~~~~~~l--~~ld~~v~~a~~~---Gi~VilDlH~~pg~q--ng~ 228 (436)
..+|++.+|+||+= +...+ .+. +.|.-..- ..+-.+++.|+++ +|+++...-.+|+.. |+.
T Consensus 112 ~Glglsi~R~~IG~~d~s~~~ysy~d-~~~D~~l~~f~~~~d~~~~~i~~lk~A~~~~~~~lki~aspWSpP~wMk~n~~ 190 (497)
T 2nt0_A 112 EGIGYNIIRVPMASCDFSIRTYTYAD-TPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGA 190 (497)
T ss_dssp TTTCCCEEEEEESCCSSSSSCCCSCC-STTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCS
T ss_pred CCCceEEEEEeecCCCCCCCCccccC-CCCCcccCCCCcCccchhhHHHHHHHHHhhCCCCcEEEEecCCCcHHHhcCCC
Confidence 35899999999962 11111 111 12321111 2344566777765 699999999988742 222
Q ss_pred CC-CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC----------CChhHHHHHHH-HHHHHH
Q 013777 229 EH-SATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG----------VALDTLKSYYK-AGYDAV 295 (436)
Q Consensus 229 ~~-sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~----------~~~~~~~~~~~-~~~~aI 295 (436)
.. .|.....+ .+.+.+.+.+++....+.|+++- .|.++.+.|||.... .+.+...+|.+ .+..++
T Consensus 191 ~~ggG~L~~~~--~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L 268 (497)
T 2nt0_A 191 VNGKGSLKGQP--GDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTL 268 (497)
T ss_dssp SSSSCBBSSCT--TSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHH
T ss_pred cCCCCccCCcc--chhHHHHHHHHHHHHHHHHHHcCCCeeEEeeccCCCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 11 11110000 02366777777777777776553 478899999997521 34567788888 577788
Q ss_pred HhhC-CCeEEEEeCCC--CCCCh-hhhh-ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCC
Q 013777 296 RKYT-STAYVIMSNRL--GPADH-KELL-SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG 370 (436)
Q Consensus 296 R~~~-p~~~Viv~~~~--~~~~~-~~~~-~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 370 (436)
++.+ ++..|++.+.. ...++ ...+ +......-..+.+|.|.... ......+..+. .+..+
T Consensus 269 ~~~gl~~~kI~~~D~n~~~~~~~~~~~l~d~~a~~~v~~ia~H~Y~~~~-----~~~~~~l~~~~----------~~~p~ 333 (497)
T 2nt0_A 269 ANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFL-----APAKATLGETH----------RLFPN 333 (497)
T ss_dssp HTSTTTTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTCCEEEEEEETTSC-----CCHHHHHHHHH----------HHCTT
T ss_pred HhcCCCCceEEEecCCCCcchhHHHHHhcChhhHhhcceEEEEecCCCC-----CChHHHHHHHH----------HHCCC
Confidence 8876 35566665421 11111 1111 11011223489999995321 11111122221 12346
Q ss_pred CeEEeecccccC---C--CCCcCHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 371 PLTFVGEWTCEW---N--VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 371 p~v~vGEwg~~~---~--~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
++++.+|.+... . ....+...-..+.+..+.-+....-+|.+|.+--
T Consensus 334 k~lw~TE~~~~~~~~~~~~~~~~w~~a~~~a~~ii~~l~~~~~~~~~Wnl~l 385 (497)
T 2nt0_A 334 TMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLAL 385 (497)
T ss_dssp SEEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEEESEE
T ss_pred CcEEEecccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhhcceeeEeeeeee
Confidence 679999987532 1 1112344445566666666665667999998854
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00021 Score=72.90 Aligned_cols=226 Identities=11% Similarity=0.100 Sum_probs=125.2
Q ss_pred hCCCCEEEecCcccccc------CCCC----CCCCc-cchHHHHHHHHHHHHH--cCCEEEEEcCCCCCCC--CCCCCCC
Q 013777 168 SNGINAVRIPVGWWIAN------DPTP----PKPFV-GGSSKVLDNAFDWAEK--YGVKVIVDLHAAPGSQ--NGNEHSA 232 (436)
Q Consensus 168 ~~G~N~VRipv~~~~~~------~~~~----~~~~~-~~~l~~ld~~v~~a~~--~Gi~VilDlH~~pg~q--ng~~~sg 232 (436)
.+|++.+|+||+=-.+. +..+ ...|. ......+-.+++.|++ .+|+++...-.+|+.. |+....|
T Consensus 80 Glglsi~R~~IG~~d~s~~~ysy~d~~~d~~l~~f~~~~d~~~~~~~lk~A~~~~~~l~i~aspWSpP~wMk~n~~~~~g 159 (447)
T 2wnw_A 80 EHNYTLARMPIQSCDFSLGNYAYVDSSADLQQGRLSFSRDEAHLIPLISGALRLNPHMKLMASPWSPPAFMKTNNDMNGG 159 (447)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSHHHHHTTCCCCHHHHHHTHHHHHHHHHHCTTCEEEEEESCCCGGGBTTSCSBSC
T ss_pred CCceEEEEEeecCCCCCCCcccccCCCCCCccccCCcccchhHHHHHHHHHHHhCCCcEEEEecCCCcHHhccCCCcCCC
Confidence 58999999999621110 1100 01222 1122344556777777 4689999999988742 2211111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC------CChhHHHHHHH-HHHHHHHhhCC-CeE
Q 013777 233 TRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG------VALDTLKSYYK-AGYDAVRKYTS-TAY 303 (436)
Q Consensus 233 ~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~------~~~~~~~~~~~-~~~~aIR~~~p-~~~ 303 (436)
+. -.+++.+.+.+++...++.|+++- .|.++.+.|||.... .+.+...+|.+ .+..++++.+. +..
T Consensus 160 ---g~--L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~k 234 (447)
T 2wnw_A 160 ---GK--LRRECYADWADIIINYLLEYRRHGINVQALSVQNEPVAVKTWDSCLYSVEEETAFAVQYLRPRLARQGMDEME 234 (447)
T ss_dssp ---CB--BCGGGHHHHHHHHHHHHHHHHHTTCCCCEEESCSSTTCCCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCE
T ss_pred ---Cc--CCHHHHHHHHHHHHHHHHHHHHcCCCeeEEeeeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCce
Confidence 11 114566777777777777776643 478899999998631 45677888888 67788998876 555
Q ss_pred EEEeCCCCCCChhhhhccCCCC-----CcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecc
Q 013777 304 VIMSNRLGPADHKELLSFASGL-----SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW 378 (436)
Q Consensus 304 Viv~~~~~~~~~~~~~~~~~~~-----~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEw 378 (436)
|++.+.... ....+......+ .-.++.+|.|.. . ....+..+. .+..+++++.+|.
T Consensus 235 I~~~D~n~~-~~~~~~~~il~d~~a~~~v~~ia~H~Y~g--~------~~~~l~~~~----------~~~p~k~lw~TE~ 295 (447)
T 2wnw_A 235 IYIWDHDKD-GLVDWAELAFADEANYKGINGLAFHWYTG--D------HFSQIQYLA----------QCLPDKKLLFSEG 295 (447)
T ss_dssp EEEEEEEGG-GHHHHHHHHTTSHHHHHHCCEEEEECTTC--C------CHHHHHHHH----------HHCTTSEEEEEEC
T ss_pred EEEeCCCcc-chhhHHHHHhcCHhHHhhCCEEEEEccCC--C------cHHHHHHHH----------HHCCCCeEEEecc
Confidence 665542211 111121100011 124799999952 1 111122211 1234667999999
Q ss_pred ccc-CCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 379 TCE-WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 379 g~~-~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
+.. |..++........+....+.......-+|.+|..-.
T Consensus 296 ~~~~~~~~~~~~g~w~~~a~~ii~~~~~~~~~~~~Wnl~l 335 (447)
T 2wnw_A 296 CVPMESDAGSQIRHWHTYLHDMIGNFKSGCSGFIDWNLLL 335 (447)
T ss_dssp CCBCCCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEESEE
T ss_pred ccCCcccCCCCCCcHHHHHHHHHHHHhcCCEEEEEhhhhh
Confidence 753 221111111234445555544555677999998763
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00074 Score=63.93 Aligned_cols=168 Identities=14% Similarity=0.076 Sum_probs=101.9
Q ss_pred HHHHHHHHhCCCCEEEe-cCccccccCCCC---------------CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWIANDPTP---------------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~~~~~~~---------------~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg 223 (436)
+.-|+.+.+.|+|+||| |+++-++.+|.. ++...-..-..|.++++.|++||++||+.-- +
T Consensus 40 D~afdEavERGYNTVRIcAmP~LLf~~p~~l~~l~pl~gQrrW~~pg~~evdgr~~L~elf~aAk~hd~~ViLSSW-Y-- 116 (393)
T 3gyc_A 40 DQVLDELSERGYNAIRIDAYPHLIAENPMKKWLLKEVWNQQDWGSPDMNEVQVQPNLNLFLSKCKERDIKVGLSSW-Y-- 116 (393)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHHHCTTCCEEECCSCSSSSSSCSSCEEECCTTHHHHHHHHHHHTTCEEEEECC-C--
T ss_pred HHHHHHHHHcCCCeEEeccccceeecCCcchhhccccccccccCCCCCceechHHHHHHHHHHHHHcCCEEEEehh-h--
Confidence 67799999999999999 333322222211 1111112567899999999999999999754 2
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC----------------CChhHHHHH
Q 013777 224 SQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG----------------VALDTLKSY 287 (436)
Q Consensus 224 ~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~----------------~~~~~~~~~ 287 (436)
|+ +.+..+.. ..=.....+.+.+++++|.++ .=...|+..||-||-.... ...+.++.|
T Consensus 117 -QQ--spseal~a-~~R~e~lA~aw~~lLdfi~~~-GL~drIAyVELhNEv~~~~la~~~~~~~~~vg~~a~~~e~l~~~ 191 (393)
T 3gyc_A 117 -RL--DVDEVCLK-LDTPEKLADCWLTILRSIEED-GLLDTILYVDLCNEWPGDSWAPFFAKTYPNVGWGNWYKEESLRW 191 (393)
T ss_dssp -CC--BTTCGGGG-CCSHHHHHHHHHHHHHHHHHT-TCGGGEEEEESSTTTTCTTTCHHHHTTCTTTCTTCTTSHHHHHH
T ss_pred -hc--CHHHHHhh-hccHHHHHHHHHHHHHHHHHc-cchhceeeEeeeccccCcccccccCccccccccchhhhHhhhHH
Confidence 11 11111111 000023344455666666653 2235888999999943211 123589999
Q ss_pred HHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhccCCCCCcEEEEEeecCcC
Q 013777 288 YKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLF 338 (436)
Q Consensus 288 ~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~~~~~~~nvv~~~H~Y~~~ 338 (436)
++++++++|+.-|+.+|..+- ..++...+... +.+--..+++|..-.+
T Consensus 192 lee~v~~lR~~hP~lpvt~Sy--T~~~~~~~~~~-d~sfldfle~h~wm~~ 239 (393)
T 3gyc_A 192 MKTSLEKMRQVYPDMPFLYSF--DHGDVKKYEEV-DCSFLDLYEHHIWMAQ 239 (393)
T ss_dssp HHHHHHHHHTTCTTSCEECCB--CCSCTTHHHHS-CCTTCSSEEBCCCGGG
T ss_pred HHHHHHHHHHhCCCCeeeeee--ccchhhhhhcc-CchHHhhhhhHHHhhc
Confidence 999999999999999987762 22333444333 2333445777766443
|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0032 Score=61.75 Aligned_cols=222 Identities=15% Similarity=0.149 Sum_probs=122.0
Q ss_pred hCCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EEcCCCCCCCCCCCCCCCCCCCC---C
Q 013777 168 SNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSATRDGFQ---E 239 (436)
Q Consensus 168 ~~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vi---lDlH~~pg~qng~~~sg~~~~~~---~ 239 (436)
..-||.|-. .+-|. ..+|.++ .| .+...|+++++|+++||.|- |=-|. |.+.+-....++.. .
T Consensus 35 ~~~Fn~it~EN~mKw~-~~ep~~G-~~---~f~~aD~~v~~a~~ngi~vrGHtLvWh~----q~P~W~~~~~d~~g~~~~ 105 (341)
T 3ro8_A 35 KMHHDVVTAGNAMKPD-ALQPTKG-NF---TFTAADAMIDKVLAEGMKMHGHVLVWHQ----QSPAWLNTKKDDNNNTVP 105 (341)
T ss_dssp HHHCSEEEESSTTSHH-HHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSS----SCCGGGTEEECTTSCEEE
T ss_pred HHhCCEEEECcccchh-HhcCCCC-cc---chHHHHHHHHHHHhCCCEEEeccccCcc----cCCHHHhccCccccccCC
Confidence 345888876 44443 3444432 33 46789999999999999984 22232 33322221111111 1
Q ss_pred CC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC----------hhHHH-----HHHHHHHHHHHhh-----
Q 013777 240 WG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----------LDTLK-----SYYKAGYDAVRKY----- 298 (436)
Q Consensus 240 w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~----------~~~~~-----~~~~~~~~aIR~~----- 298 (436)
.. +...++..+.++.+++||++ .|..||++|||...... ...|. .|...++++.|+.
T Consensus 106 ~s~~~l~~~~~~hI~~vv~rYkg--~i~~WDVvNE~~~~~~~~p~~~~~~~r~s~w~~~lG~d~i~~AF~~Ar~a~~~~p 183 (341)
T 3ro8_A 106 LGRDEALDNLRTHIQTVMKHFGN--KVISWDVVNEAMNDNPSNPADYKASLRQTPWYQAIGSDYVEQAFLAAREVLDENP 183 (341)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGG--GSSEEEEEECCBCSSCSCTTCTGGGBCCCHHHHHHCTTHHHHHHHHHHHHHHHST
T ss_pred CCHHHHHHHHHHHHHHHHHHcCC--cceEEEEecccccCCCCccccccccccCChHHHhcCHHHHHHHHHHHHHhcccCC
Confidence 22 34566788999999999997 57889999999853210 11222 4788899999998
Q ss_pred CCCeEEEEeCCCCCCCh----------hhhhcc-------CCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhh
Q 013777 299 TSTAYVIMSNRLGPADH----------KELLSF-------ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASD 361 (436)
Q Consensus 299 ~p~~~Viv~~~~~~~~~----------~~~~~~-------~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~ 361 (436)
+|+..+++-+ +..... ..+... ..+-+.+-+..|.-.. .+++ .+. +.
T Consensus 184 dp~akL~~ND-Yn~~~~~k~~~~~~lv~~l~~~~a~~~~~g~~IdGIG~Q~H~~~~-------~~~~----~~~----~~ 247 (341)
T 3ro8_A 184 SWNIKLYYND-YNEDNQNKATAIYNMVKDINDRYAAAHNGKLLIDGVGMQGHYNIN-------TNPD----NVK----LS 247 (341)
T ss_dssp TCCCEEEEEE-SCTTSHHHHHHHHHHHHHHHHHHHHHTTTCCSCCEEEECCEEETT-------CCHH----HHH----HH
T ss_pred CCCcEEEEec-CCCcccchHHHHHHHHHHHHHhhhcccCCCCccceeeechhccCC-------CCHH----HHH----HH
Confidence 6688888864 211111 111110 1245778899996532 1222 222 22
Q ss_pred HHHhhhcCCCeEEeecccccCCCCC-cCHH---HHHHHHHHHHHHHcc---CCCcEEEEceec
Q 013777 362 LGAVTTSNGPLTFVGEWTCEWNVKD-ASKQ---DYQRFANAQLDVYGR---ATFGWAYWAHKC 417 (436)
Q Consensus 362 ~~~~~~~~~p~v~vGEwg~~~~~~~-~~~~---~~~~~~~~q~~~~~~---~~~Gw~~W~~k~ 417 (436)
+..+... |.+|.|+|+-....... .+.+ .....++...++|.+ ...|-++|.+..
T Consensus 248 l~~~a~l-Gl~v~iTElDi~~~~~~~~~~~~~~~qa~~y~~~~~~~~~~~~~v~giT~WG~~D 309 (341)
T 3ro8_A 248 LEKFISL-GVEVSVSELDVTAGNNYTLPENLAVGQAYLYAQLFKLYKEHADHIARVTFWGMDD 309 (341)
T ss_dssp HHHHHTT-TCEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHHHHTGGGEEEEEEC----
T ss_pred HHHHHHc-CCceEEEeeeccCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCceEEEEeCCCC
Confidence 3333333 55699999965432111 1111 122334444555543 345899998876
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.022 Score=57.47 Aligned_cols=149 Identities=15% Similarity=0.226 Sum_probs=82.3
Q ss_pred HHHHHHHhCCCCEEEecCccccccCCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 235 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~ 235 (436)
+-++.|+++|+++|-|.=-+..-........| + =|.++.|+++|+.|+++||+||||+-- +|++.
T Consensus 40 ~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~--------NH~s~-- 109 (424)
T 2dh2_A 40 GRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTP--------NYRGE-- 109 (424)
T ss_dssp TTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCT--------TTTSS--
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECC--------CcCCC--
Confidence 34789999999999983222111111100001 1 156899999999999999999999953 34331
Q ss_pred CCCCCC----hhHHHHHHHHHHHHHHHhCCCCceeEEEeec-CCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCC
Q 013777 236 GFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIELIN-EPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310 (436)
Q Consensus 236 ~~~~w~----~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~N-EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~ 310 (436)
..|. +.-++...+++++..+ + +-..+= +|.++ -|. ...+.++..+.+++..|+.+++++..+
T Consensus 110 --~~wF~~q~~~Vr~~~~~~~~~Wl~-~-gvDGfR-lD~v~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~e~~ 176 (424)
T 2dh2_A 110 --NSWFSTQVDTVATKVKDALEFWLQ-A-GVDGFQ-VRDIENLKD--------ASSFLAEWQNITKGFSEDRLLIAGTNS 176 (424)
T ss_dssp --STTCSSCHHHHHHHHHHHHHHHHH-H-TCCEEE-ECCGGGSTT--------HHHHHHHHHHHHHHHCTTCEEEEECSC
T ss_pred --cccccccCHHHHHHHHHHHHHHHH-c-CCCEEE-EeccccCCc--------cHHHHHHHHHHHHHhCCCcEEEEEEec
Confidence 1243 3344555566666555 3 222221 34333 232 123455556667788887777777644
Q ss_pred CCCChhhhhccCCCCCcEEEEEee
Q 013777 311 GPADHKELLSFASGLSRVVIDVHY 334 (436)
Q Consensus 311 ~~~~~~~~~~~~~~~~nvv~~~H~ 334 (436)
. +...+..+.....+.++++|+
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~f~~ 198 (424)
T 2dh2_A 177 S--DLQQILSLLESNKDLLLTSSY 198 (424)
T ss_dssp C--CHHHHHHHTTTCTTCEEECST
T ss_pred C--CHHHHHHHhccccccccchhh
Confidence 3 333333332222235666653
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.061 Score=52.04 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=76.1
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++-++.|++.|++.||| + +++ ..++..++..||+|+|.+-... . ...
T Consensus 18 ~~Vv~llks~gi~~VRl------Y-~~D-------------~~vL~Al~~sgi~V~lGV~n~~------l------~~l- 64 (323)
T 3ur8_A 18 QDVIKLYNANNIKKMRI------Y-YPH-------------TNVFNALKGSNIEIILDVPNQD------L------EAL- 64 (323)
T ss_dssp HHHHHHHHHTTCCEEEE------S-SCC-------------HHHHHHHTTCCCEEEEEECGGG------T------GGG-
T ss_pred HHHHHHHHhCCCCeEEe------c-CCC-------------HHHHHHHHhcCCeEEEeccccc------h------hhh-
Confidence 45677789999999998 1 221 3677888899999999985420 0 000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC---ChhHHHHHHHHHHHHHHhhCCC--eEEEE
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTLKSYYKAGYDAVRKYTST--AYVIM 306 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p~--~~Viv 306 (436)
.. .+...+.++.-...|.....|.++-+-||+..... ....+..+++.+..++++.+-. ..|..
T Consensus 65 --a~-~~~A~~WV~~nV~~y~~~~~I~~IaVGNEvl~~~~~~~~~~~Lvpam~nv~~aL~~aGl~~~IkVsT 133 (323)
T 3ur8_A 65 --AN-PSNANGWVQDNIRNHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNALSSAGLQNQIKVST 133 (323)
T ss_dssp --GS-HHHHHHHHHHHTGGGTTTSEEEEEEEEESCCTTSGGGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEE
T ss_pred --hh-HHHHHHHHHHHHhhhCCCceEEEEEEccccccCCCcccCHHHHHHHHHHHHHHHHHCCCCCCceeee
Confidence 02 34444455555556766778888999999986432 2678999999999999987743 44443
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.012 Score=56.58 Aligned_cols=110 Identities=16% Similarity=0.166 Sum_probs=72.6
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++.++.|++.|++.||| | +++ ..++..++..||+|+|.+-... . ...
T Consensus 16 ~~vv~llk~~~i~~vRl---Y----~~d-------------~~vL~A~~~tgi~v~lgv~n~~-----------~-~~~- 62 (306)
T 1ghs_A 16 SDVVQLYRSKGINGMRI---Y----FAD-------------GQALSALRNSGIGLILDIGNDQ-----------L-ANI- 62 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---S----SCC-------------HHHHHHTTTSCCEEEEECCGGG-----------H-HHH-
T ss_pred HHHHHHHHhcCCCEEEE---c----CCC-------------HHHHHHHHhcCCEEEEeccccc-----------h-hhh-
Confidence 45567789999999998 1 111 3567788889999999875310 0 000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCC-eEEEE
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST-AYVIM 306 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~Viv 306 (436)
....+...+.++.-...|.....|.++-+-||+.. + ....+..+++.+.+++++.+-. .+|..
T Consensus 63 --a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~-~-~~~~L~~am~~v~~aL~~~gl~~ikVst 126 (306)
T 1ghs_A 63 --AASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQG-G-ATQSILPAMRNLNAALSAAGLGAIKVST 126 (306)
T ss_dssp --HHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCCG-G-GGGGHHHHHHHHHHHHHHHTCTTSEEEE
T ss_pred --hhCHHHHHHHHHHHHhhhCCCceEEEEEEeccccC-C-CHHHHHHHHHHHHHHHHHCCCCceeEEe
Confidence 01122333334444445655568888999999986 3 6778999999999999987643 44443
|
| >4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0077 Score=62.35 Aligned_cols=126 Identities=16% Similarity=0.158 Sum_probs=71.0
Q ss_pred HHHHHHHHHhCCC-CceeEEEeecCCCCC--C--C------ChhHHHHHHHHHHHHHHhhC---CCeEEEEe-CCCCC--
Q 013777 250 AVIDFLAARYANR-PSLAAIELINEPLAP--G--V------ALDTLKSYYKAGYDAVRKYT---STAYVIMS-NRLGP-- 312 (436)
Q Consensus 250 ~~~~~lA~ry~~~-~~v~g~eL~NEP~~~--~--~------~~~~~~~~~~~~~~aIR~~~---p~~~Viv~-~~~~~-- 312 (436)
++.+.+|++|+.. +...-||++|||... . . ..+.+.+|+..+.++||+.. |+..|.-. .+|..
T Consensus 122 a~a~~~a~~~~~~e~~p~y~Ev~NEP~v~~~~~~~~~~~~~~~~~~~e~~~~vA~aIk~~~~~np~vkVGGpasA~p~~e 201 (591)
T 4aw7_A 122 AAGAWSAEYYSNSELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVDFYASIGKHIHNNPRLNGKMKVIGYAAAYPAWE 201 (591)
T ss_dssp HHHHHHHHHHHTCSEEEEEEECSSSCGGGTTCTTCSSCHHHHHHHHHHHHHHHHHHHHTCTTTTTTCEEEEEEESCCCTT
T ss_pred HHHHHHHHHhccCCCCceeEEeccCCCcccccccccCCCchhHHHHHHHHHHHHHHHhccccCCCceeEecccccccccc
Confidence 4445566666644 345669999999832 2 1 14578899999999999875 77766432 23321
Q ss_pred -CChh-------hhhccCCCCCcEEEEEeecCcCCC-C---CCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccc
Q 013777 313 -ADHK-------ELLSFASGLSRVVIDVHYYNLFSN-N---FNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTC 380 (436)
Q Consensus 313 -~~~~-------~~~~~~~~~~nvv~~~H~Y~~~~~-~---~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~ 380 (436)
.++. .|++. .+..-..+|+|.|..... . ..+...+..++-|... ..+.--..+|++|.|+|+
T Consensus 202 ~~nF~~W~~~~k~Fmd~-ag~~mDf~S~H~Yd~~~~~~~~~rsGsn~EA~LDmie~Y-----s~~k~G~vKP~~ISEYG~ 275 (591)
T 4aw7_A 202 DGNFNYWNTRMKMFIDR-AGAYMDGFSVHLYDGIVTGTDTKRSGSNSEAVLDMVEAY-----SYIKFGHVKPLAISEFGG 275 (591)
T ss_dssp TTTTHHHHHTHHHHHHH-HGGGCSEEEEEEEEEC-----CCCTTHHHHHHHHHHHHH-----HHHHHSSCCCEEEEEEEE
T ss_pred ccchhhhhHHHHHHHHh-cCCCcCEEEEeecCCcccCCCccccCccHhHHHHHHHHH-----HHHHhCCCcceEEeccCC
Confidence 1222 23332 345567899999975311 1 1111223333333221 111122356799999996
Q ss_pred c
Q 013777 381 E 381 (436)
Q Consensus 381 ~ 381 (436)
.
T Consensus 276 ~ 276 (591)
T 4aw7_A 276 I 276 (591)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.016 Score=55.98 Aligned_cols=106 Identities=19% Similarity=0.170 Sum_probs=70.7
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++-++.|++.|++.||| + +++ ..++..++..||+|+|.+-...- .+ .
T Consensus 16 ~~vv~llk~~~i~~vRl------Y-~~d-------------~~vl~A~~~tgi~v~lgv~n~~~-----~~---~----- 62 (312)
T 2cyg_A 16 SEVVSLYKSNNIARMRL------Y-DPN-------------QAALQALRNSNIQVLLDVPRSDV-----QS---L----- 62 (312)
T ss_dssp HHHHHHHHHTTCCEEEE------S-SCC-------------HHHHHHHTTSCCEEEEEECHHHH-----HH---H-----
T ss_pred HHHHHHHHhcCCCEEEE------c-CCC-------------HHHHHHHHhcCCEEEEeccccch-----hh---h-----
Confidence 34467889999999998 1 111 25677888899999998753100 00 0
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS 300 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p 300 (436)
...++...+.++.-...|-....|.++-+-||+.........+..+++.+.+++++.+-
T Consensus 63 --a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~~~~~~~~L~~am~~v~~aL~~~gl 121 (312)
T 2cyg_A 63 --ASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGL 121 (312)
T ss_dssp --HHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTC
T ss_pred --hhCHHHHHHHHHHHHHhhCCCceEEEEEeccccccCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 00112222333444445655668888999999986445678899999999999998764
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.035 Score=58.36 Aligned_cols=134 Identities=18% Similarity=0.271 Sum_probs=78.8
Q ss_pred HHHHHHHhCCCCEEEe-cCcc----ccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC----
Q 013777 161 EDFKFLSSNGINAVRI-PVGW----WIANDPT---PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ---- 225 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~----~~~~~~~---~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q---- 225 (436)
+.++.|+++|+|+|=| |+.- | ..++. ..+|- =+..+.|+++|+.|.++||+||||+ |....+.
T Consensus 176 ~~LdyLk~LGvt~I~L~Pi~~~~~~~-GYd~~dy~~idp~-~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~ 253 (583)
T 1ea9_C 176 DHLDHLSKLGVNAVYFTPLFKATTNH-KYDTEDYFQIDPQ-FGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVD 253 (583)
T ss_dssp HTHHHHHHHTCSEEEECCCSSCSSSS-TTSCSCTTCCCTT-TCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHH
T ss_pred HhhHHHHHcCCCEEEECCCccCCCCC-CcCcccccccCcc-cCCHHHHHHHHHHHHHCCCEEEEEEccccCCCccHHHHH
Confidence 4489999999999998 4411 1 11111 11111 1468999999999999999999998 4432210
Q ss_pred ---CC-------CCC-CC-C------CCCCCC-----------CC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 226 ---NG-------NEH-SA-T------RDGFQE-----------WG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 226 ---ng-------~~~-sg-~------~~~~~~-----------w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
++ +-+ .+ . ...... +. +..++..++.++..++.|.= ..+ =+|++++-
T Consensus 254 ~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gv-DGf-R~D~~~~~- 330 (583)
T 1ea9_C 254 VLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGI-DGW-RLDVANEV- 330 (583)
T ss_dssp HHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCC-SEE-EETTCTTS-
T ss_pred HHhcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHhcCc-eEE-EecccccC-
Confidence 00 000 00 0 001111 11 44556667777777766632 222 25666653
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 276 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+ ..+.+++.++|++..|+.+++-+
T Consensus 331 ----~----~~f~~~~~~~v~~~~p~~~~igE 354 (583)
T 1ea9_C 331 ----S----HQFWREFRRVVKQANPDAYILGE 354 (583)
T ss_dssp ----C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ----C----HHHHHHHHHHHHhhCCCeEEEEE
Confidence 2 35777788889999998776654
|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.011 Score=59.36 Aligned_cols=215 Identities=12% Similarity=0.084 Sum_probs=109.1
Q ss_pred hCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCC-CCCCCCCCCCCCChhHHH
Q 013777 168 SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN-EHSATRDGFQEWGDSNVA 246 (436)
Q Consensus 168 ~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~-~~sg~~~~~~~w~~~~~~ 246 (436)
.+|++.+|+||+.-. ..|. ....+++.|++.||+++...-.+|+...-. ...|...+ ....+++.+
T Consensus 46 g~g~s~~R~~ig~~~-------~~~~-----~~~~~~k~A~~~~~~i~aspWspP~WMk~~~~~~g~~~~-g~L~~~~y~ 112 (401)
T 3kl0_A 46 QLGFSILRIHVDENR-------NNWY-----KEVETAKSAVKHGAIVFASPWNPPSDMVETFNRNGDTSA-KRLKYNKYA 112 (401)
T ss_dssp CCCCCEEEEEECSSG-------GGGG-----GGHHHHHHHHHTTCEEEEEESCCCGGGEEEEEETTEEEE-EEECGGGHH
T ss_pred CCceEEEEEEeCCCc-------ccch-----hHHHHHHHHHhCCCEEEEecCCCCHHhccCCCcCCCccC-CcCChHHHH
Confidence 489999999997421 1222 234567777889999999999999742100 00010000 011245667
Q ss_pred HHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC----CChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCC-Ch-hhhh
Q 013777 247 DTVAVIDFLAARYANRP-SLAAIELINEPLAPG----VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPA-DH-KELL 319 (436)
Q Consensus 247 ~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~----~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~-~~-~~~~ 319 (436)
.+.+++....+.|+++- .|.++.+.|||.... .+.+..++|.++... .. +..|++.+.+... .+ ..++
T Consensus 113 ~yA~Y~~k~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~t~~~~~~fi~~~lg---~~--~tkI~~~d~~~~~~~~~~~il 187 (401)
T 3kl0_A 113 AYAQHLNDFVTFMKNNGVNLYAISVQNEPDYAHEWTWWTPQEILRFMRENAG---SI--NARVIAPESFQYLKNLSDPIL 187 (401)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEESCSCTTSCTTSCCCCHHHHHHHHHHTGG---GC--SSEEEEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeeecccCCCCCCCCCCHHHHHHHHHHhcc---cc--CceEEecchhhhhhhhhHHHh
Confidence 77777777777777654 677888999997521 233444444433221 11 2445555432210 11 1111
Q ss_pred c-cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC--CcCHHHHHHHH
Q 013777 320 S-FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK--DASKQDYQRFA 396 (436)
Q Consensus 320 ~-~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~--~~~~~~~~~~~ 396 (436)
. ......-.++.+|.|... ...+.. ..+. .+..++.++.+|.+...... ......-..+.
T Consensus 188 ~D~~a~~~v~gia~H~Y~~~---~~~l~~----~~~~----------~~~~~K~lw~TE~~~~~~~~~~~~~w~~al~~a 250 (401)
T 3kl0_A 188 NDPQALANMDILGTHLYGTQ---VSQFPY----PLFK----------QKGAGKDLWMTEVYYPNSDTNSADRWPEALDVS 250 (401)
T ss_dssp TCHHHHHTCSEEEEECTTCC---GGGSCC----HHHH----------HHCTTCEEEEEEECCSCCCTTCTTCTTTTHHHH
T ss_pred cCHhHHhhCcEEEEEcCCCC---cccccc----hhHH----------hhCCCCeEEEEecccCCCCCccccchhHHHHHH
Confidence 1 000001146899999531 111100 0000 12335679999986533211 11111112344
Q ss_pred HHHHHHHcc-CCCcEEEEceec
Q 013777 397 NAQLDVYGR-ATFGWAYWAHKC 417 (436)
Q Consensus 397 ~~q~~~~~~-~~~Gw~~W~~k~ 417 (436)
+.....+.. ..-+|.+|....
T Consensus 251 ~~I~~~l~~~~~~a~v~Wnl~~ 272 (401)
T 3kl0_A 251 QHIHNAMVEGDFQAYVWWYIRR 272 (401)
T ss_dssp HHHHHHHHTSCCSEEEEEESBS
T ss_pred HHHHHHHHhccCcEEEEccccc
Confidence 444444433 346999998843
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A | Back alignment and structure |
|---|
Probab=96.40 E-value=0.073 Score=51.18 Aligned_cols=104 Identities=18% Similarity=0.163 Sum_probs=69.8
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++.++.|++.|++.||| + +++ ..++..++..||+|+|.+-... . ...
T Consensus 16 ~~vv~llk~~~i~~VRl------Y-~~d-------------~~vL~A~~~tgi~v~lgv~n~~-----------~-~~~- 62 (306)
T 1aq0_A 16 STVVSMFKSNGIKSMRL------Y-APN-------------QAALQAVGGTGINVVVGAPNDV-----------L-SNL- 62 (306)
T ss_dssp HHHHHHHHHHTCCEEEE------S-SCC-------------HHHHHHHTTSCCEEEEEECGGG-----------H-HHH-
T ss_pred HHHHHHHHhcCCCEEEE------c-CCC-------------HHHHHHHHhcCCEEEEecccch-----------h-hHh-
Confidence 45677889999999998 1 111 3567788899999999875310 0 000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
....+...+.++.-...| ....|-++-+-||+.. +. ...+..+++.+.+++++.+-.
T Consensus 63 --a~~~~~a~~wv~~nv~~y-~~~~I~~I~VGNEvl~-g~-~~~L~~am~~v~~aL~~~gl~ 119 (306)
T 1aq0_A 63 --AASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAG-GA-TRNLVPAMKNVHGALVAAGLG 119 (306)
T ss_dssp --HHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCCG-GG-GGGHHHHHHHHHHHHHHTTCT
T ss_pred --hhCHHHHHHHHHHhhccC-CCccEEEEEecccccC-CC-HHHHHHHHHHHHHHHHHCCCC
Confidence 012233334444444456 4457888999999985 32 778999999999999987643
|
| >2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.013 Score=60.64 Aligned_cols=106 Identities=24% Similarity=0.265 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHcCCEEEEEcCCC-----CCCCCCCCCCCCCCCCCCCC----------------hhHHHHHHHHHHHHHH
Q 013777 199 VLDNAFDWAEKYGVKVIVDLHAA-----PGSQNGNEHSATRDGFQEWG----------------DSNVADTVAVIDFLAA 257 (436)
Q Consensus 199 ~ld~~v~~a~~~Gi~VilDlH~~-----pg~qng~~~sg~~~~~~~w~----------------~~~~~~~~~~~~~lA~ 257 (436)
.+|++++||++.|...||.+.-. .+..+-.+.+.. ....|. +.......++++.|.+
T Consensus 91 ~~~ef~~~~~~~g~e~m~~vnl~~~v~~~~~~~~~e~~~~--~~~~w~e~~n~~~~~~~~~p~~~~g~~~~~~~~~~lr~ 168 (524)
T 2yih_A 91 VVTSFHDQSLKLGTYSLVTLPMAGYVAADGNGSVQESEAA--PSARWNQVVNAKNAPFQLQPDLNDNYVYVDEFVHFLVN 168 (524)
T ss_dssp HHHHHHHHHHHHTCEEEEEECCSSEEECCCCEECCGGGCS--SSTTEEEEESCCCSCCCSSCCSSSSEEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCeEEEEEecCcccccccCcChhHhhcC--cccchhhhhccccCcccccCCCCCcchhHHHHHHHHHH
Confidence 38999999999999999998852 010000000000 000011 0011113467778888
Q ss_pred HhCCC--C-ceeEEEeecCCCC----------CCCChhHHHHHHHHHHHHHHhhCCCeEEEE
Q 013777 258 RYANR--P-SLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIM 306 (436)
Q Consensus 258 ry~~~--~-~v~g~eL~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv 306 (436)
+|... | .|-.|+|-|||.. ...+.+.+.+.+.+.+++||++||+..|+.
T Consensus 169 ~~G~~~~p~gVk~W~LgNE~dgWq~gh~~~~p~~~t~~ey~~~~~e~AkamK~vDP~i~l~g 230 (524)
T 2yih_A 169 KYGTASTKAGVKGYALDNEPALWSHTHPRIHPEKVGAKELVDRSVSLSKAVKAIDAGAEVFG 230 (524)
T ss_dssp HHCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HcCCCCCCCCeeEEEeccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEe
Confidence 88654 2 4666999999963 123678899999999999999999977664
|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.069 Score=56.71 Aligned_cols=208 Identities=15% Similarity=0.045 Sum_probs=107.0
Q ss_pred HhCCCCEEEecCcccccc-CCCCCCCC----ccch-HHHHHHHHHHHHHc--CCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013777 167 SSNGINAVRIPVGWWIAN-DPTPPKPF----VGGS-SKVLDNAFDWAEKY--GVKVIVDLHAAPGSQNGNEHSATRDGFQ 238 (436)
Q Consensus 167 a~~G~N~VRipv~~~~~~-~~~~~~~~----~~~~-l~~ld~~v~~a~~~--Gi~VilDlH~~pg~qng~~~sg~~~~~~ 238 (436)
+-+|++.+|+||+=-.+. +...+..+ +... ....-.+++.|+++ +|+++...-.+|+...-. +
T Consensus 63 ~Gigls~~R~~IG~~dfs~~~~~~~~f~~~~d~~~~~~~~i~~lk~A~~~~p~lki~aspWSpP~WMK~n---~------ 133 (656)
T 3zr5_A 63 FGASLHILKVEIGGDGQTTDGTEPSHMHYELDENYFRGYEWWLMKEAKKRNPDIILMGLPWSFPGWLGKG---F------ 133 (656)
T ss_dssp TSSCCSEEEEEECCSSBCSSSBCCCSCSSTTCCCSCCSSHHHHHHHHHHHCTTCEEEEEESCBCGGGGTT---S------
T ss_pred CCCeeEEEEEEecCCCccCCCCCCcCCccccccchhhchhHHHHHHHHHhCCCcEEEEecCCCcHHhccC---C------
Confidence 357999999999632111 11111111 1111 11122334444444 589999999998743210 1
Q ss_pred CCChhHHHHHHHHHHHHHHHh-CCC-CceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCC-eEEEEeC-CCCCCC
Q 013777 239 EWGDSNVADTVAVIDFLAARY-ANR-PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST-AYVIMSN-RLGPAD 314 (436)
Q Consensus 239 ~w~~~~~~~~~~~~~~lA~ry-~~~-~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~Viv~~-~~~~~~ 314 (436)
.+.+.+.+.+.+++....+.| +.+ =.|.++.+.|||... ..|.+.+..++++.+.+ ..|++.+ .|.. .
T Consensus 134 ~l~~~~y~~yA~Ylvk~i~~y~~~~GI~i~~Is~qNEP~~~-------~~fik~L~p~L~~~gl~~~kI~~~D~n~~~-~ 205 (656)
T 3zr5_A 134 SWPYVNLQLTAYYVVRWILGAKHYHDLDIDYIGIWNERPFD-------ANYIKELRKMLDYQGLQRVRIIASDNLWEP-I 205 (656)
T ss_dssp SCTTSSHHHHHHHHHHHHHHHHHHHCCCCCEECSCTTSCCC-------HHHHHHHHHHHHHTTCTTCEEEEEEECSTT-H
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhcCCceEEEeeccCCCcc-------ccHHHHHHHHHHHcCCCccEEEEcCCCchH-H
Confidence 122345555555555555553 332 367788999999752 24667778888888875 5566654 3321 1
Q ss_pred hhhhhc-cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHH
Q 013777 315 HKELLS-FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQ 393 (436)
Q Consensus 315 ~~~~~~-~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~ 393 (436)
...++. ......-.++.+| |.. +. .. +. .+..+++++..|.+..++. .....
T Consensus 206 ~~~il~d~~a~~~v~gia~H-Y~g-~~-----~~-~~---------------~~~p~k~lw~TE~~~~~~~----~~g~g 258 (656)
T 3zr5_A 206 SSSLLLDQELWKVVDVIGAH-YPG-TY-----TV-WN---------------AKMSGKKLWSSEDFSTINS----NVGAG 258 (656)
T ss_dssp HHHHHHCHHHHHHCCEEEEE-SCT-TC-----CC-HH---------------HHHHTCEEEEEEEECSCTT----HHHHH
T ss_pred HHHHhcCHhHHhhccEEEEE-CCC-CC-----cc-hH---------------hhCCCCceEEEccccCCCC----CCCcc
Confidence 111111 0001123578999 642 11 00 10 0122456999998764432 11122
Q ss_pred HHHHHHHHHH-ccCCCcEEEEceecC
Q 013777 394 RFANAQLDVY-GRATFGWAYWAHKCE 418 (436)
Q Consensus 394 ~~~~~q~~~~-~~~~~Gw~~W~~k~~ 418 (436)
.|.+....-| ....-+|.+|..-..
T Consensus 259 ~wa~~i~~~~~~~~~~a~i~Wnl~ld 284 (656)
T 3zr5_A 259 CWSRILNQNYINGNMTSTIAWNLVAS 284 (656)
T ss_dssp HHHHHHHHHHHHHCCCEEEEECSEEC
T ss_pred HHHHHHHHHHHhCCceEEEEEeeeeC
Confidence 3333322222 335679999988754
|
| >2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.32 Score=48.33 Aligned_cols=182 Identities=11% Similarity=0.027 Sum_probs=96.9
Q ss_pred chHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCCCCCCC---h--hHHHHHHHHHHHHHHHhCCC------
Q 013777 195 GSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQEWG---D--SNVADTVAVIDFLAARYANR------ 262 (436)
Q Consensus 195 ~~l~~ld~~v~~a~~~Gi~VilDlH~~-pg~qng~~~sg~~~~~~~w~---~--~~~~~~~~~~~~lA~ry~~~------ 262 (436)
..++.+.+.+..+.++|--|.|..|.. |......+.+. ..+. + ...+.+.+.++.||+..+.-
T Consensus 109 ~~~~~~~~~~~~~~~~Ggi~~isWh~~~p~~~~~~~~~~-----~~~~~i~~Gg~~~~~~~~~id~iA~~l~~L~~~~~~ 183 (396)
T 2vx5_A 109 VNFEKMQHWIKAGYSRGGVITISWHVFNPVSGGNSWDKT-----PAVHELIPGGARHATLKAYLDTFVAFNEGLADVDAQ 183 (396)
T ss_dssp CBHHHHHHHHHHHHHTTCEEEEECCCCCTTTSCCTTCCC-----CCHHHHSTTSTTHHHHHHHHHHHHHHHHTTCEECTT
T ss_pred CChHHHHHHHHHHHHCCCeEEEEEeeCCCCCCCCCcCch-----HHHHHHhCCChhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 356666667777788899999999965 32111111110 0011 0 12234556666666644332
Q ss_pred -----CceeEEEeecCCCCC-------CCChhHHHHHHHHHHHHHHh-hCCCeEEEEeCCCCCC-----ChhhhhccCCC
Q 013777 263 -----PSLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRK-YTSTAYVIMSNRLGPA-----DHKELLSFASG 324 (436)
Q Consensus 263 -----~~v~g~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~-~~p~~~Viv~~~~~~~-----~~~~~~~~~~~ 324 (436)
|-|+ +-+..|.... ..+++.+++.++.+++++|+ .+-+.+|.+=+..... +...+.....+
T Consensus 184 G~~v~~PV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~~~~~YPG 262 (396)
T 2vx5_A 184 GNKHYPPII-FRPWHEHNGDWFWWGKGHASEQDYIALWRFTVHYLRDEKKLRNLIYAYSPDRSRIDMANFEAGYLYGYPG 262 (396)
T ss_dssp SCEECCCEE-EECSCSTTSSSSTTSBTTBCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBGGGSCGGGHHHHHTTTCCC
T ss_pred CCccCCCEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEcCCCCccccCCCccchhhcCCC
Confidence 1334 8899998853 12478999999999999994 4555666543221110 11233333233
Q ss_pred CC-cEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCC
Q 013777 325 LS-RVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 383 (436)
Q Consensus 325 ~~-nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~ 383 (436)
++ =.|+.+-.|......-...+.+...+.+ ......+..+.+..++|+.|+|+|....
T Consensus 263 DdyVDivG~D~Y~~~~~~~~~~~~~~f~~~~-~~~~~~l~~~a~~~~Kpial~E~G~~~~ 321 (396)
T 2vx5_A 263 DAYVDIIGLDNYWDVGHEANTASADEQKAAL-TASLKQLVQIARSKGKIAALTETGNNRL 321 (396)
T ss_dssp GGGCSEEEEECCGGGTCTTCCSCHHHHHHHH-HHHHHHHHHHHHHHTCEEEEEEECCTTC
T ss_pred CceEEEEEEeccCCCCCCccccchhhHHHHH-HHHHHHHHHHhhcCCCeEEEEeecCCCC
Confidence 33 3577777786432111111112111111 1122234444444577899999998653
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.077 Score=55.75 Aligned_cols=135 Identities=14% Similarity=0.251 Sum_probs=77.4
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc---ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-----
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI---ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ----- 225 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~---~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q----- 225 (436)
+.++.|+++|+|+|=| |+.-.. ..++.. .+|- =+..+.|+++|+.|.++||+||||+ |....+.
T Consensus 180 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~-~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~ 258 (588)
T 1j0h_A 180 DHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPH-FGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDV 258 (588)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTT-TCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCcc-CCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccchhHHHH
Confidence 4489999999999998 441100 111110 0111 1468999999999999999999998 4432110
Q ss_pred ------CCC---CC-CCCC-----C-CC-----------CCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC
Q 013777 226 ------NGN---EH-SATR-----D-GF-----------QEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 277 (436)
Q Consensus 226 ------ng~---~~-sg~~-----~-~~-----------~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~ 277 (436)
+.. -+ .+.. . .+ ..+. +..++..++.++..++.|.=+ .+ =+|++++-
T Consensus 259 ~~~g~~s~y~dwy~~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~giD-Gf-R~D~a~~~--- 333 (588)
T 1j0h_A 259 WKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDID-GW-RLDVANEI--- 333 (588)
T ss_dssp HHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCC-EE-EETTGGGS---
T ss_pred HhcCCCCCcccccccccCCCCCCCCCCeEEecCCCCccccccCCHHHHHHHHHHHHHHHHhcCCc-EE-EEeccccC---
Confidence 000 00 0000 0 00 0121 445566667777777666322 22 25666653
Q ss_pred CCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 278 GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 278 ~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+ ..+.+++.++|++..|+.++|-+
T Consensus 334 --~----~~f~~~~~~~v~~~~p~~~~igE 357 (588)
T 1j0h_A 334 --D----HEFWREFRQEVKALKPDVYILGE 357 (588)
T ss_dssp --C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --C----HHHHHHHHHHHHHhCCCeEEEEE
Confidence 2 35677778888999998776654
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.081 Score=55.53 Aligned_cols=133 Identities=17% Similarity=0.199 Sum_probs=75.5
Q ss_pred HHHHHHHhCCCCEEEe-cCcc----ccccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC----
Q 013777 161 EDFKFLSSNGINAVRI-PVGW----WIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ---- 225 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~----~~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q---- 225 (436)
+.++.|+++|+|+|=| |+.- | ..++.. .+|- =+..+.|+++|+.|.++||+||||+ |....+.
T Consensus 177 ~~LdyLk~LGvt~I~L~Pi~~~~~~~-GYd~~dy~~id~~-~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~ 254 (585)
T 1wzl_A 177 DRLPYLEELGVTALYFTPIFASPSHH-KYDTADYLAIDPQ-FGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRD 254 (585)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSS-CCSCSEEEEECTT-TCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHH
T ss_pred HHhHHHHHcCCCEEEECCcccCCCCC-CcCcccccccCcc-cCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCCccHHHHH
Confidence 4489999999999998 4410 1 111110 0111 1468999999999999999999997 4432110
Q ss_pred -------CC---CCC-CC-C-----CCCC------------CCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 226 -------NG---NEH-SA-T-----RDGF------------QEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 226 -------ng---~~~-sg-~-----~~~~------------~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
+. +-+ .+ . .... ..+. +..++..++.++..+ .|.= ..+ =+|++++-.
T Consensus 255 ~~~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl-~~gv-DGf-R~D~a~~~~ 331 (585)
T 1wzl_A 255 VLQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQGI-DGW-RLDVANEVD 331 (585)
T ss_dssp HHHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-HTTC-CEE-EETTGGGSC
T ss_pred HHhcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHHH-hCCC-eEE-EEeccccCC
Confidence 00 000 00 0 0000 1111 344555666666666 5532 222 256666532
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 276 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
..+.+++.++|++..|+.++|-+
T Consensus 332 ---------~~f~~~~~~~v~~~~p~~~~igE 354 (585)
T 1wzl_A 332 ---------HAFWREFRRLVKSLNPDALIVGE 354 (585)
T ss_dssp ---------HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ---------HHHHHHHHHHHHHHCCCEEEEEE
Confidence 35777888889999998766554
|
| >1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A | Back alignment and structure |
|---|
Probab=95.47 E-value=0.12 Score=48.47 Aligned_cols=103 Identities=16% Similarity=0.202 Sum_probs=75.3
Q ss_pred CCcccccEEEEecCCCceEEEcCCCC----CCc--ceEEEEEec---CCeEEEEEe-CCceEEeecCCCC-ceEEEEecC
Q 013777 1 MSTKFQKYIAAESGGGTIVVANRTSA----SGW--ETFRLWRVN---ETFYNFRVN-NKQFIGLENQGQG-NGLVAVSNT 69 (436)
Q Consensus 1 ~s~~~~~~~~a~~~g~~~~~anr~~~----~~w--e~f~~~~~~---~~~~~~~~~-~~~~~~~~~~g~~-~~~~a~~~~ 69 (436)
||.-|+||-..=.+.+.-|||+++.. +.| -.|++.++. .++++|+.. .|+|+.-...|+. -...+...+
T Consensus 60 R~~~n~kyW~R~~~~~~wIvA~~~ep~ed~d~~~ctlFkp~~v~~~~~~~~~f~~vq~g~~~~~~~~~~~~~g~~~~~~~ 139 (303)
T 1jlx_A 60 KSRYTNKYLVRWSPNHYWITASANEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNYTVGGSFVSYLFAESS 139 (303)
T ss_dssp EETTTCCEEEESSTTCCBEEEEESSCCCCTTSTTCCCEEEEESSTTCSSEEEEEETTTTEECEEECCSTTCCSEEECCCS
T ss_pred EecCCCceeeecCCCCceEEecCCCCCcccCcccccceEEEEeccCCCceEEEEEEecCceEEeeecCCceeeEEEEccc
Confidence 35569999999656667999997765 555 369999995 689999988 9999999875322 235555555
Q ss_pred C---CCCceEEEEEcCC---CCc-ceEEeccCCceEEEeeC
Q 013777 70 A---GYSETFQIVRKDG---DSS-RVRLSASNGMFIQAISE 103 (436)
Q Consensus 70 ~---~~~e~f~~~~~~~---~~~-~v~i~~~nG~~lq~~~~ 103 (436)
+ +.-+-|+|+.-.. =+. .|.+|..||+||.+...
T Consensus 140 ~~~~~~~d~ftv~d~~~~~~LPk~~v~fKGdNgkYL~~~~~ 180 (303)
T 1jlx_A 140 QIDTGSKDVFHVIDWKSIFQFPKGYVTFKGNNGKYLGVITI 180 (303)
T ss_dssp SCCTTCTTCEEEEESGGGGCCCCSSEEEECTTSCEEEEEEE
T ss_pred ccccccCCcEEEEchhhhhhCcceeEEEEcCCCcEEEEEEc
Confidence 5 4556688766521 113 78899999999998754
|
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* | Back alignment and structure |
|---|
Probab=95.43 E-value=0.41 Score=46.09 Aligned_cols=105 Identities=13% Similarity=0.115 Sum_probs=71.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
.+-++.||+.||+.||| + +++ ..++..++..||+|||.+-... . ...
T Consensus 17 ~~vv~llks~gi~~VRl------Y-daD-------------~~vL~Al~~sgi~v~vGV~n~~-----------l-~~l- 63 (316)
T 3em5_A 17 SEVIALYKKSNITRMRI------Y-DPN-------------QAVLEALRGSNIELILGVPNSD-----------L-QSL- 63 (316)
T ss_dssp HHHHHHHHHTTCCEEEC------S-SCC-------------HHHHHHHTTCCCEEEEEECGGG-----------H-HHH-
T ss_pred HHHHHHHHHcCCCEEEE------e-cCC-------------HHHHHHhhcCCceEEEecccch-----------h-hhc-
Confidence 56688889999999998 2 221 1477889999999999885310 0 000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC-C---hhHHHHHHHHHHHHHHhhCC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-A---LDTLKSYYKAGYDAVRKYTS 300 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~-~---~~~~~~~~~~~~~aIR~~~p 300 (436)
.....+.+.++.=...|.....|..+-+-||+..... + ...+...++.+..++++.+-
T Consensus 64 ---a~~~~A~~WV~~nV~~y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL 125 (316)
T 3em5_A 64 ---TNPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGL 125 (316)
T ss_dssp ---TSHHHHHHHHHHHTGGGTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred ---cCHHHHHHHHHHhhhhcCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCC
Confidence 0122333334433345655667888889999975432 2 67889999999999999874
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=95.33 E-value=0.021 Score=57.35 Aligned_cols=60 Identities=22% Similarity=0.531 Sum_probs=50.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE--EEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~V--ilDlH~~pg 223 (436)
+..++.||++|+..|.++| ||-..++..|..| .+...+++++.+++.||++ ||..|...|
T Consensus 36 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~l~~mv~~~GLKlq~vmSFHqCGg 97 (495)
T 1wdp_A 36 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQY---DWRAYRSLLQLVQECGLTLQAIMSFHQCGG 97 (495)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 6889999999999999999 6666666555566 4788889999999999997 889997644
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=95.24 E-value=0.022 Score=57.27 Aligned_cols=60 Identities=25% Similarity=0.608 Sum_probs=50.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE--EEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~V--ilDlH~~pg 223 (436)
+..++.||++|+..|.++| ||-..++..|..| .+...+++++.+++.||++ ||..|...|
T Consensus 37 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mv~~~GLKlq~vmSFHqCGg 98 (498)
T 1fa2_A 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQY---DWSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 6889999999999999999 6666666555566 4788889999999999997 889997644
|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.025 Score=57.22 Aligned_cols=60 Identities=25% Similarity=0.573 Sum_probs=50.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE--EEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~V--ilDlH~~pg 223 (436)
+..++.||++|+..|.++| ||-..++..|..| .+...+++++.+++.||++ ||..|...|
T Consensus 34 ~a~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mvr~~GLKlq~vmSFHqCGg 95 (535)
T 2xfr_A 34 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAY---DWSAYKQLFELVQKAGLKLQAIMSFHQCGG 95 (535)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 6889999999999999999 6666666555666 4788889999999999997 889997644
|
| >3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=95.14 E-value=0.041 Score=55.99 Aligned_cols=58 Identities=16% Similarity=0.180 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhCCCC---ceeEEEeecCCCC----------CCCChhHHHHHHHHHHHHHHhhCCCeEEEE
Q 013777 249 VAVIDFLAARYANRP---SLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIM 306 (436)
Q Consensus 249 ~~~~~~lA~ry~~~~---~v~g~eL~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv 306 (436)
-++++.|.++|.... .|-.|+|-|||.. ...+.+.+.+++.+...+||+++|+..|+-
T Consensus 153 ~e~v~~l~~~~G~~~~p~~Vkyw~lgNEpdlW~~tH~dvhp~~~t~eEY~~~~~~~AkAmK~vDP~ikl~G 223 (517)
T 3ik2_A 153 DEFVNYLVNKYGSASGSKGIKGYSLDNEPSLWPSTHPLIHPDKTKCSEVLDKDTQLAQVVKKIDPAAETFG 223 (517)
T ss_dssp HHHHHHHHHHHCCTTSTTSCCEEEESSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHhcCCCCCCCceeEEecCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEEc
Confidence 457778889998663 7888999999952 235788999999999999999999977643
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.088 Score=56.98 Aligned_cols=142 Identities=15% Similarity=0.269 Sum_probs=79.1
Q ss_pred HHHHHHHHhCCCCEEEe-cCc------cccccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI-PVG------WWIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN 226 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~------~~~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qn 226 (436)
++-+..|+++|+|+|=| ||. .| ..++.. +.+- =+..+.|+++|+.|.++||+||||+ |.......
T Consensus 205 ~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~-GY~~~dy~a~~~~-~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~ 282 (755)
T 3aml_A 205 DNVLPRIRANNYNTVQLMAIMEHSYYASF-GYHVTNFFAVSSR-SGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTD 282 (755)
T ss_dssp HHTHHHHHHTTCCEEEEESCEECSCGGGT-TCSCSEEEEECGG-GCCHHHHHHHHHHHHHTTCEEEEEECCSCBCCCTTT
T ss_pred HHHHHHHHHcCCCEEEECchhcCCCCCCC-CCccCCCCccCCC-CCCHHHHHHHHHHHHHCCCEEEEEEecccccccccc
Confidence 34589999999999998 331 12 111110 0110 1468999999999999999999998 44332211
Q ss_pred ---CCC----------CCCCCCC-CCCCC--------hhHHHHHHHHHHHHHHHhCCCCceeEEEeec----CC------
Q 013777 227 ---GNE----------HSATRDG-FQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELIN----EP------ 274 (436)
Q Consensus 227 ---g~~----------~sg~~~~-~~~w~--------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~N----EP------ 274 (436)
+++ +.+. .+ ...|. +..++..++.++..++.|.=+- + =+|.+. ++
T Consensus 283 g~~~fd~~~~~~~~yf~~~~-~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e~gvDG-f-R~Dav~~m~~~~~g~~~~ 359 (755)
T 3aml_A 283 GLNGYDVGQNTHESYFHTGD-RGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDG-F-RFDGVTSMLYHHHGINKG 359 (755)
T ss_dssp SGGGGCSSCCGGGSSBCCGG-GGEETTTTEECBCTTSHHHHHHHHHHHHHHHHHHCCCE-E-EETTHHHHHBTTTTTTCC
T ss_pred chhccccCCCCCcceeecCC-CCccCCCCCceeccCCHHHHHHHHHHHHHHHHHcCCCE-E-EecchhhhhhcccCcccc
Confidence 111 1100 01 11232 4455666677777777663221 1 123222 10
Q ss_pred --------CCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 275 --------LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 275 --------~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
.....+.+ -..|.+.+.++|++..|+.++|-+
T Consensus 360 f~~~~~~~~~~~~~~~-ai~fl~~~~~~v~~~~p~~~lIaE 399 (755)
T 3aml_A 360 FTGNYKEYFSLDTDVD-AIVYMMLANHLMHKLLPEATIVAE 399 (755)
T ss_dssp CCSCGGGTSSTTBCHH-HHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred cccccccccccccchh-HHHHHHHHHHHHHHHCCCeEEEEE
Confidence 00011122 236778888899999999877665
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.039 Score=57.05 Aligned_cols=57 Identities=21% Similarity=0.322 Sum_probs=38.7
Q ss_pred HHHHHHhCCCCEEEe-cCccccc-cCCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 162 DFKFLSSNGINAVRI-PVGWWIA-NDPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 162 d~~~ia~~G~N~VRi-pv~~~~~-~~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
-++.|+++|+|+|-| ||.-... .....+..| + =|.++.|+++|+.|.++||+||||+
T Consensus 37 kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 100 (549)
T 4aie_A 37 RLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDL 100 (549)
T ss_dssp THHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 378999999999998 4410000 000000001 0 1578999999999999999999998
|
| >3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A | Back alignment and structure |
|---|
Probab=94.84 E-value=1.6 Score=44.16 Aligned_cols=207 Identities=11% Similarity=0.065 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCC-CCCCCCCCCCCCChhHHHHHHHHHHHHHH---HhCCCC----cee
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGN-EHSATRDGFQEWGDSNVADTVAVIDFLAA---RYANRP----SLA 266 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDlH~~-pg~qng~-~~sg~~~~~~~w~~~~~~~~~~~~~~lA~---ry~~~~----~v~ 266 (436)
..+.+.+.+.++.++|=-|.|..|.. |.....+ +.++.......=.......+...++.||. .+++.. -|+
T Consensus 90 ~~~~i~~~i~~~~~rGGIvTlsWH~~np~tg~~~~dts~~~~~~ilpGg~~~~~y~~~l~~iA~~l~~Lk~~~g~gvPVl 169 (475)
T 3tp4_A 90 NIALFADYIRKADAIGGVNTVGAGVENFVTGGSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDGTLIPIV 169 (475)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEESGGGSTTSTTCC---CHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSCBCCEE
T ss_pred cHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCcccCCHHHHHHhcCCCchhHHHHHHHHHHHHHHHhhccccCCCceEE
Confidence 56778888889999999999999973 1110001 11100000000000112345555555554 566521 233
Q ss_pred EEEeecCCCCCCC-------ChhHHHHHHHHHHHHHHhh-CCCeEEEE-eCCCC-CCChhhhhccCCCCC-cEEEEEeec
Q 013777 267 AIELINEPLAPGV-------ALDTLKSYYKAGYDAVRKY-TSTAYVIM-SNRLG-PADHKELLSFASGLS-RVVIDVHYY 335 (436)
Q Consensus 267 g~eL~NEP~~~~~-------~~~~~~~~~~~~~~aIR~~-~p~~~Viv-~~~~~-~~~~~~~~~~~~~~~-nvv~~~H~Y 335 (436)
|-+.-|....-. +++.++++++.+++++|+. +-+.++.+ ++.-. ..+...+....++++ =.++.+-.|
T Consensus 170 -~Rp~HEmnG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwspn~~~~~~~~~~~~~YPGDdyVDiVG~D~Y 248 (475)
T 3tp4_A 170 -FRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLGLDTY 248 (475)
T ss_dssp -EEEEECCCSSSCCCHHHHHSHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEECCEEE
T ss_pred -EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCccchhhcCCCCCeEEEEEEecc
Confidence 789999886321 3678999999999999964 43444444 32111 112334444433433 357777777
Q ss_pred CcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCC--CCcCHHHHHHHHHHHHHHHccC----CCc
Q 013777 336 NLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV--KDASKQDYQRFANAQLDVYGRA----TFG 409 (436)
Q Consensus 336 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~--~~~~~~~~~~~~~~q~~~~~~~----~~G 409 (436)
.... + +...+ .+......+..+.+..++|+.|+|||..... .+..+ ..|+...++++.+. .+.
T Consensus 249 ~~~~------~-~~f~~-~~~~~l~~l~~~A~~~gKpiaItE~G~~~~~~~~G~~d---a~W~t~~l~~i~~~P~v~~ia 317 (475)
T 3tp4_A 249 DSTG------S-DAFLA-GLVADLRMIAEIADEKGKVSAFTRFGVSGGVGTNGSSP---AQWFTKVLAAIKADPVASRNA 317 (475)
T ss_dssp ESSC------C-HHHHH-HHHHHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCC---TTHHHHHHHHHHTCTTTTCCC
T ss_pred CCCC------c-hhHHH-HHHHHHHHHHHHHhhCCCcEEEEeeccCCCcccCCCch---HHHHHHHHHHHHhCcccceeE
Confidence 5421 1 11111 1112223344455556778999999986521 11111 23555555555543 466
Q ss_pred EE-EEc
Q 013777 410 WA-YWA 414 (436)
Q Consensus 410 w~-~W~ 414 (436)
|+ +|.
T Consensus 318 Yvl~Wr 323 (475)
T 3tp4_A 318 YMETGE 323 (475)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 55 565
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=94.84 E-value=0.38 Score=48.43 Aligned_cols=58 Identities=19% Similarity=0.189 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCEEEecCccccccCC--------CCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIANDP--------TPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~~--------~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|+=-+...... ..+..| + -+..+.|+++|+.|.++||+||+|+
T Consensus 34 ~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~ 104 (449)
T 3dhu_A 34 ADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDI 104 (449)
T ss_dssp TTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999984222111000 000011 1 1468999999999999999999998
|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
Probab=94.83 E-value=0.43 Score=52.82 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=77.5
Q ss_pred HHHHHHhCCCCEEEe-cCcccccc------------CCC---------CCCCCccc-hHHHHHHHHHHHHHcCCEEEEEc
Q 013777 162 DFKFLSSNGINAVRI-PVGWWIAN------------DPT---------PPKPFVGG-SSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 162 d~~~ia~~G~N~VRi-pv~~~~~~------------~~~---------~~~~~~~~-~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
-++.|+++|+|+|=| ||.-.... ++. ...| .++ ..+.|+++|+.|.++||+||||+
T Consensus 474 ~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp-~Gt~~~~dfk~LV~~aH~~GI~VILDv 552 (921)
T 2wan_A 474 GIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTP-EGTARITELKQLIQSLHQQRIGVNMDV 552 (921)
T ss_dssp HHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCS-STTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCC-CCCccHHHHHHHHHHHHHcCCEEEEEE
Confidence 489999999999998 44211100 100 0012 111 27999999999999999999998
Q ss_pred ---CCCCCCC-------CCCCCC----CCCCCC------CCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC
Q 013777 219 ---HAAPGSQ-------NGNEHS----ATRDGF------QEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 277 (436)
Q Consensus 219 ---H~~pg~q-------ng~~~s----g~~~~~------~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~ 277 (436)
|..+... ..+.+. |..... ..+. +..++..++.++..++.|.=+ .+ =+|++..-
T Consensus 553 V~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~gVD-Gf-R~Da~~~~--- 627 (921)
T 2wan_A 553 VYNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLDSVNYWVNEYHVD-GF-RFDLMALL--- 627 (921)
T ss_dssp CTTCCSCSSSSHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCC-EE-EETTGGGG---
T ss_pred ccccccccccccccCCCCCeEEEcCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHcCCC-EE-Eecccccc---
Confidence 6654431 111110 100001 1111 455666677778878766322 22 24555431
Q ss_pred CCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 278 GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 278 ~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+ ..+.+++.+++++.+|+.++|-+
T Consensus 628 --~----~~~~~~~~~~l~~~~p~~~ligE 651 (921)
T 2wan_A 628 --G----KDTMAKISNELHAINPGIVLYGE 651 (921)
T ss_dssp --C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --C----HHHHHHHHHHHHHhCCceEEEEe
Confidence 1 24566777888888998766544
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.58 Score=50.27 Aligned_cols=145 Identities=18% Similarity=0.204 Sum_probs=80.3
Q ss_pred HHHHHHHHhCCCCEEEe-cCcccc-----ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC--
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWI-----ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ-- 225 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~-----~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q-- 225 (436)
++-+..|+++|+|+|-| |+.... ..++.. +.+ .=+..+.|.++|+.|.++||+||||+ |..+...
T Consensus 267 ~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~-~yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~~~~~~~ 345 (722)
T 3k1d_A 267 RELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTS-RFGTPDDFRALVDALHQAGIGVIVDWVPAHFPKDAWAL 345 (722)
T ss_dssp HHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECTTCCCCCTTTT
T ss_pred HHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccc-cCCCHHHHHHHHHHHHHcCCEEEEEEEeeccCCccchh
Confidence 44458999999999997 442110 111110 001 01467999999999999999999998 4322210
Q ss_pred CCCC------CCCC-CCCCCCCC--------hhHHHHHHHHHHHHHHHhCCCCceeEEEeec---------C-----CCC
Q 013777 226 NGNE------HSAT-RDGFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELIN---------E-----PLA 276 (436)
Q Consensus 226 ng~~------~sg~-~~~~~~w~--------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~N---------E-----P~~ 276 (436)
..++ +... ......|. +..++..++.+...+++|.=+- +=+|.+- + |..
T Consensus 346 ~~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gvDG--fR~Dav~~mly~d~~r~~g~w~~n~ 423 (722)
T 3k1d_A 346 GRFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDG--LRVDAVASMLYLDYSRPEGGWTPNV 423 (722)
T ss_dssp TTTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCCCE--EEECCTHHHHBCCCCCCSSCCSCCC
T ss_pred hcCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhCCCE--EEEcchhhhhhcccccccccccccc
Confidence 0000 1000 01122342 4455666677777777763221 1122110 0 111
Q ss_pred C-CCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 277 P-GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 277 ~-~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
. +.....-..+.+++.++|++..|+.++|-+
T Consensus 424 ~gg~~n~~~~~fl~~l~~~v~~~~P~~~~iaE 455 (722)
T 3k1d_A 424 HGGRENLEAVQFLQEMNATAHKVAPGIVTIAE 455 (722)
T ss_dssp SSCSBCHHHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred CCCccChHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 0 111123467899999999999999877766
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=94.54 E-value=0.27 Score=52.90 Aligned_cols=136 Identities=12% Similarity=0.171 Sum_probs=77.0
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc-------------ccCCCC---C-CCCcc------chHHHHHHHHHHHHHcCCEEEE
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI-------------ANDPTP---P-KPFVG------GSSKVLDNAFDWAEKYGVKVIV 216 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~-------------~~~~~~---~-~~~~~------~~l~~ld~~v~~a~~~Gi~Vil 216 (436)
+-++.|+++|+|+|=| |+.-.. ..++.. + ..|.. +.++.|+++|+.|.++||+|||
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 3599999999999998 542100 111100 0 01111 1379999999999999999999
Q ss_pred Ec---CCCCCCC-------CCCCC----CCCCCCCCC------CC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 217 DL---HAAPGSQ-------NGNEH----SATRDGFQE------WG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 217 Dl---H~~pg~q-------ng~~~----sg~~~~~~~------w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
|+ |..+... ..+.+ .|....... +. +..++..++.++..++.|.=+ .+ =+|++..-
T Consensus 335 DvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~~Wl~e~gVD-Gf-R~D~~~~~- 411 (718)
T 2e8y_A 335 DVVFNHVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEEYNVD-GF-RFDLLGIL- 411 (718)
T ss_dssp EECTTCCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCC-EE-EETTGGGS-
T ss_pred EEecccccCcccccccccCCCeEEecCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHhCCC-EE-EEeccccC-
Confidence 98 5544320 01110 011100111 22 455666677778777776322 22 24555432
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 276 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+. .+.+++.+++++..|+.++|-+
T Consensus 412 ----~~----~~~~~~~~~~~~~~p~~~ligE 435 (718)
T 2e8y_A 412 ----DI----DTVLYMKEKATKAKPGILLFGE 435 (718)
T ss_dssp ----BH----HHHHHHHHHHHHHSTTCEEEEC
T ss_pred ----CH----HHHHHHHHHHHHhCCCeEEEEe
Confidence 22 3556677788888888766544
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=94.50 E-value=0.049 Score=54.98 Aligned_cols=57 Identities=28% Similarity=0.339 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc---ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI---ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~---~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|-| |+.-.. ..++.. ..|- =+..+.|+++|+.|+++||+||||+
T Consensus 27 ~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~-~Gt~~df~~lv~~aH~~Gi~VilD~ 90 (441)
T 1lwj_A 27 NAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAE-YGSEREFKEMIEAFHDSGIKVVLDL 90 (441)
T ss_dssp HTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTT-TCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcc-cCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4488999999999998 331100 011110 0110 1568999999999999999999998
|
| >2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* | Back alignment and structure |
|---|
Probab=94.50 E-value=0.11 Score=53.60 Aligned_cols=106 Identities=21% Similarity=0.257 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHcCC-EEEEEcCCCCC--CCCCC---CCCCCCCCCCCCC-------------hh---HHHHHHHHHHHHH
Q 013777 199 VLDNAFDWAEKYGV-KVIVDLHAAPG--SQNGN---EHSATRDGFQEWG-------------DS---NVADTVAVIDFLA 256 (436)
Q Consensus 199 ~ld~~v~~a~~~Gi-~VilDlH~~pg--~qng~---~~sg~~~~~~~w~-------------~~---~~~~~~~~~~~lA 256 (436)
.++++++||++.|. ..|+.+.-... ..... +.+..+ ...|. +. ......++++.|.
T Consensus 89 ~~~~f~~~~~~~g~~~~m~tvnl~~~~~~d~a~~~~e~~~~~--~~~w~~~~~~~~~~~~~~p~~~~g~~~~~ewv~yl~ 166 (519)
T 2e4t_A 89 VVTTFHDKALSKNVPYTLITLQAAGYVSADGNGPVSQEETAP--SSRWKEVKFEKGAPFSLTPDTEDDYVYMDEFVNYLV 166 (519)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSEEESCCCEECCGGGCSS--STTEEEEESCCCSCCCSSCCTTSSEEEHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCceEEEEecCCccchhccccchhhccCC--cccccccccccCCccccCCCCCCChHHHHHHHHHHH
Confidence 79999999999998 89998875331 00000 000000 00010 00 1112344566666
Q ss_pred HHhCCC--C-ceeEEEeecCCCC----------CCCChhHHHHHHHHHHHHHHhhCCCeEEEE
Q 013777 257 ARYANR--P-SLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIM 306 (436)
Q Consensus 257 ~ry~~~--~-~v~g~eL~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv 306 (436)
.+|... | .|-.|+|-|||.. ...+.+.+.+.|.+.++++|.++|+..++-
T Consensus 167 ~~nG~~~~P~~VkyW~lGNE~dgW~~gh~~~~p~~~t~~ey~~~~~~~AkamK~~DP~i~l~G 229 (519)
T 2e4t_A 167 NKYGNASTPTGIKGYSIDNEPALWSHTHPRIHPDNVTAKELIEKSVALSKAVKKVDPYAEIFG 229 (519)
T ss_dssp HHHCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HhcCCCcCCCCccEEEeCccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEe
Confidence 677654 3 4666999999931 123678899999999999999999966653
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=94.21 E-value=0.093 Score=54.33 Aligned_cols=62 Identities=21% Similarity=0.164 Sum_probs=42.1
Q ss_pred HHHHHHHHhCCCCEEEe-cCccccc-------cCC-------CCCC--CCccchHHHHHHHHHHHHHcCCEEEEEc---C
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWIA-------NDP-------TPPK--PFVGGSSKVLDNAFDWAEKYGVKVIVDL---H 219 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~~-------~~~-------~~~~--~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H 219 (436)
.+-++.|+++|+++|=| |+. ... ..+ .... |- =+..+.|+++|+.|+++||+||||+ |
T Consensus 40 ~~~LdyLk~LGvt~IwL~Pi~-e~~~~~~~~~~~~~~~GY~~~~id~~p~-~Gt~~dfk~Lv~~aH~~GI~VilD~V~NH 117 (527)
T 1gcy_A 40 RQQAATIAADGFSAIWMPVPW-RDFSSWSDGSKSGGGEGYFWHDFNKNGR-YGSDAQLRQAASALGGAGVKVLYDVVPNH 117 (527)
T ss_dssp HHHHHHHHHTTCSEEEECCCS-CCCCCBC---CCBCCSSTTCSSSCSCSS-SCCHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred HHHHHHHHhcCCCEEEeCCcc-ccccccccCCCCCCCCCcccccCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEEeecC
Confidence 34588999999999998 442 100 000 0001 11 1468999999999999999999998 5
Q ss_pred CCCC
Q 013777 220 AAPG 223 (436)
Q Consensus 220 ~~pg 223 (436)
..+.
T Consensus 118 t~~~ 121 (527)
T 1gcy_A 118 MNRG 121 (527)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 5443
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=94.20 E-value=0.5 Score=51.92 Aligned_cols=103 Identities=16% Similarity=0.194 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEEc---CCCCCC-----CCCCCCCCCCCCC---------CCCC-hhHHHHHHHHHHHHHHH
Q 013777 197 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS-----QNGNEHSATRDGF---------QEWG-DSNVADTVAVIDFLAAR 258 (436)
Q Consensus 197 l~~ld~~v~~a~~~Gi~VilDl---H~~pg~-----qng~~~sg~~~~~---------~~w~-~~~~~~~~~~~~~lA~r 258 (436)
++.|+++|+.|.++||+||||+ |.++++ ...+.+....++. .... +..++..++.++.+++.
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e 448 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSE 448 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999997 655431 0111110001111 0111 44566677888888887
Q ss_pred hCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCC
Q 013777 259 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 311 (436)
Q Consensus 259 y~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~ 311 (436)
|.=+ . +=+|++-. .+ ..+.+.++.++|+.+|+.+++ +..|.
T Consensus 449 ~gVD-G-FRfD~a~~-----~~----~~~~~~~~~~~~~~~P~~~li-gE~Wd 489 (877)
T 3faw_A 449 FKVD-G-FRFDMMGD-----HD----AAAIELAYKEAKAINPNMIMI-GEGWR 489 (877)
T ss_dssp HCCC-E-EEETTGGG-----SB----HHHHHHHHHHHHHHCTTCEEE-ECCCS
T ss_pred cCCc-E-EEEecCCc-----CC----HHHHHHHHHHHHhhCCCcEEE-Ecccc
Confidence 7422 1 22455432 12 245567788899999976554 54453
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=94.18 E-value=0.05 Score=55.16 Aligned_cols=58 Identities=22% Similarity=0.484 Sum_probs=40.6
Q ss_pred HHHHHHHHhCCCCEEEecCc------------cccccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRIPVG------------WWIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~------------~~~~~~~~~~~~~~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
++-.+.|+++|+++|=||=. ||...+|... ..+ =|..+.|+++|+.|.++||+||||+
T Consensus 26 ~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy-~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 26 LECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSY-KLCTRSGNEDEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCc-eeCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 44456799999999999432 2222222211 011 1578999999999999999999998
|
| >2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* | Back alignment and structure |
|---|
Probab=94.10 E-value=1.7 Score=41.08 Aligned_cols=94 Identities=12% Similarity=0.102 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC
Q 013777 198 KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 277 (436)
Q Consensus 198 ~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~ 277 (436)
..+.+.++.+.+.|--++|..|-..+. -... ..|. + +..++++.+ .|. .+ +.| |+ +-+..|....
T Consensus 49 ~~~~~~~~~~~~~G~i~~isw~P~~~~--~~~i---~~G~--~-d~~i~~~A~---~l~-~~-g~p-V~-~R~~hE~nG~ 113 (283)
T 2v3g_A 49 SWVRPYADAVYNNGSILMITWEPWEYN--TVDI---KNGK--A-DAYITRMAQ---DMK-AY-GKE-IW-LRPLHEANGD 113 (283)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCC--HHHH---HTTT--T-HHHHHHHHH---HHH-HH-CSC-EE-EEESCCTTSS
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCCCCC--HHHh---cCCc--h-HHHHHHHHH---HHH-hc-CCc-EE-EEeccccCCC
Confidence 345567778899999999999932110 0000 0010 0 122222222 222 23 445 44 8899998853
Q ss_pred ------C-----CChhHHHHHHHHHHHHHHhhCCCeEEEE
Q 013777 278 ------G-----VALDTLKSYYKAGYDAVRKYTSTAYVIM 306 (436)
Q Consensus 278 ------~-----~~~~~~~~~~~~~~~aIR~~~p~~~Viv 306 (436)
. .+++.+++.++.+++++|+.+.+.++++
T Consensus 114 Wf~Wg~~~~~~~~~p~~y~~~wr~~~~~~r~~g~~n~~~v 153 (283)
T 2v3g_A 114 WYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWV 153 (283)
T ss_dssp SSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEB
T ss_pred cccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 1 2688999999999999999865555554
|
| >3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A | Back alignment and structure |
|---|
Probab=93.89 E-value=0.35 Score=49.73 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHcCCEEEEEcCCCC--------------------CCCCCCCC-----C--CCC-CC------CCCCC--
Q 013777 198 KVLDNAFDWAEKYGVKVIVDLHAAP--------------------GSQNGNEH-----S--ATR-DG------FQEWG-- 241 (436)
Q Consensus 198 ~~ld~~v~~a~~~Gi~VilDlH~~p--------------------g~qng~~~-----s--g~~-~~------~~~w~-- 241 (436)
...+.+++..+++|.+-||.|-.+- |.|...+. + |.. ++ .+...
T Consensus 93 ~~~~~~~~~~~~~g~~~~~T~~~~g~v~~~~~~~~~~~~~s~~~~~~q~~~~~~w~~~~gn~~~~~~~~~~~~~p~~~~~ 172 (535)
T 3ii1_A 93 ERGDTFIANSQAAGAQAMITIPTIGWVARLGANRSKLASFSIAKYGAQSGNDWQWFPDAGNGVLTSGQNVTGNNPNDANT 172 (535)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCSSEEECCBGGGBCEETTBHHHHCCBSCEETTTEEEEECSBBTTSCBCCSCCGGGTEE
T ss_pred hHHHHHHHHHHhcCCceeEEEeccceEecccccCCccccccccccCcccCCccccCCccCCccccCCcccCCCCcccccC
Confidence 5788999999999999999887431 11211110 0 000 01 01110
Q ss_pred hhHHHHHHHHHHHHHHHhCCC--CceeEEEeecCCCC----------CCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 242 DSNVADTVAVIDFLAARYANR--PSLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 242 ~~~~~~~~~~~~~lA~ry~~~--~~v~g~eL~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
+.+.....+++..|.++|... -.|-.|+|-|||.. ...+.+.+.+.+.+..++||.+||+..|+-.
T Consensus 173 ~~~~~y~~~~v~~l~~~~G~~~~~~vk~w~l~NE~dlW~~th~d~hp~~~t~~e~~~~~~~~Aka~K~~DP~i~l~GP 250 (535)
T 3ii1_A 173 LVDSTFQQGWAQHLVSQWGTAAGGGLRYYILDNEPSIWFSTHRDVHPVGPTMDEIRDKMLDYGAKIKTVDPSALIVGP 250 (535)
T ss_dssp ECCHHHHHHHHHHHHHHHCCTTTTSCCEEEECSCGGGHHHHTTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCcHHHHHHHHHHHHHhcCccCCCCceEEEeCCccccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEeeh
Confidence 123445567778888887553 36778999999932 1246678888999999999999999888743
|
| >1odz_A Mannanase A; hydrolase, family 26, glycoside-hydrolase, glycosynthase, manno-oligosaccharide; HET: MAN BMA; 1.4A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1r7o_A* 2whm_A* 1j9y_A 1gvy_A* 1gw1_A* | Back alignment and structure |
|---|
Probab=93.65 E-value=2.8 Score=41.37 Aligned_cols=129 Identities=12% Similarity=0.100 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHhCC---C----CceeEEEeecCCCCC-------CCChhHHHHHHHHHHHHHH-hhCCCeEEEEeCCC
Q 013777 246 ADTVAVIDFLAARYAN---R----PSLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVR-KYTSTAYVIMSNRL 310 (436)
Q Consensus 246 ~~~~~~~~~lA~ry~~---~----~~v~g~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR-~~~p~~~Viv~~~~ 310 (436)
+.+.+.++.||+..+. . --|+ |-+.-|.... ..+++.++++++.+++++| ..+-+.+|.+=...
T Consensus 142 ~~~~~~id~iA~~l~~l~~~~G~~vPV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~~~d~~r~~~g~~Nliwvwsp~ 220 (386)
T 1odz_A 142 PVLNGYLDQVAEWANNLKDEQGRLIPVI-FRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPN 220 (386)
T ss_dssp HHHHHHHHHHHHHHHTCBCTTSCBCCEE-EECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCB
T ss_pred HHHHHHHHHHHHHHHHhhhccCCCceEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCceEEEEEeCC
Confidence 3566667776665443 2 1233 7899998753 1247899999999999999 55556566553222
Q ss_pred CC--CChhhhhccCCCCC-cEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccC
Q 013777 311 GP--ADHKELLSFASGLS-RVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEW 382 (436)
Q Consensus 311 ~~--~~~~~~~~~~~~~~-nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~ 382 (436)
.. .+...+.....+++ =.|+.+-.|..... .. ...+.+. .....+..+.+..++|+.|+|+|...
T Consensus 221 ~~~~~~~~~~~~~YPGDdyVDivG~D~Y~~~~~-----~~-~f~~~~~-~~l~~~~~~A~~~~Kpial~E~G~~~ 288 (386)
T 1odz_A 221 NFWDVTEANYLERYPGDEWVDVLGFDTYGPVAD-----NA-DWFRNVV-ANAALVARMAEARGKIPVISGIGIRA 288 (386)
T ss_dssp CCSSCCHHHHHSSCCCTTTCSEECCEEEECSSS-----CH-HHHHHHH-HHHHHHHHHHHHHTCEECBCEEEECH
T ss_pred CCCCCCccchhhcCCCCCeEEEEEEeccCCCCC-----Cc-cHHHHHH-HHHHHHHHHhhcCCCeEEEEeccCCC
Confidence 11 12234444433433 35777777754221 10 1111111 11223334444457789999999754
|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=93.62 E-value=0.12 Score=51.57 Aligned_cols=58 Identities=17% Similarity=0.243 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEec-Ccccc---ccCCCCCCCCc-c--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIP-VGWWI---ANDPTPPKPFV-G--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRip-v~~~~---~~~~~~~~~~~-~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|=|+ +.-.. ..++......+ + +..+.|+++|+.|+++||+||+|+
T Consensus 25 ~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~ 89 (405)
T 1ht6_A 25 GKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADI 89 (405)
T ss_dssp TTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 34789999999999984 32110 11111100111 1 468999999999999999999998
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=93.61 E-value=0.1 Score=54.41 Aligned_cols=58 Identities=22% Similarity=0.335 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCCEEEe-cCcccccc-CCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIAN-DPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~-~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=| ||.-.... .+..+..| + =+.++.|+++|+.|.++||+||||+
T Consensus 36 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 100 (557)
T 1zja_A 36 EKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDV 100 (557)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4478999999999998 44211000 00000001 0 1568999999999999999999998
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=93.53 E-value=0.061 Score=55.05 Aligned_cols=58 Identities=22% Similarity=0.339 Sum_probs=39.5
Q ss_pred HHHHHHHhCCCCEEEecCcccccc-CCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAN-DPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~-~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|=|.=-+..-. ....+..| + =+..+.|+++|+.|+++||+||||+
T Consensus 60 ~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 123 (488)
T 2wc7_A 60 EDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDG 123 (488)
T ss_dssp HTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 458899999999999842121100 00000000 1 1568999999999999999999998
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=93.52 E-value=0.11 Score=54.22 Aligned_cols=58 Identities=16% Similarity=0.267 Sum_probs=39.5
Q ss_pred HHHHHHHhCCCCEEEecCcccccc--CCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAN--DPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~--~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|-|.=-+..-. .+..+..| + =+.++.|+++|+.|+++||+||||+
T Consensus 35 ~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (558)
T 1uok_A 35 SKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (558)
T ss_dssp TTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 347899999999999932121110 00011011 1 1578999999999999999999998
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=93.50 E-value=0.11 Score=54.38 Aligned_cols=58 Identities=21% Similarity=0.332 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCEEEecCcccccc--CCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAN--DPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~--~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|.=-+..-. .+..+..| + =+.++.|+++|+.|.++||+||||+
T Consensus 49 ~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 113 (570)
T 1m53_A 49 EKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 113 (570)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 447899999999999832121100 01011111 1 1578999999999999999999998
|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A | Back alignment and structure |
|---|
Probab=93.46 E-value=0.29 Score=53.56 Aligned_cols=169 Identities=11% Similarity=0.086 Sum_probs=101.0
Q ss_pred HHHHHHHHhCCCCEEEecCcccc-----c--------------cCCC------------CCCCC----ccchHHHHHHHH
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWI-----A--------------NDPT------------PPKPF----VGGSSKVLDNAF 204 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~-----~--------------~~~~------------~~~~~----~~~~l~~ld~~v 204 (436)
|..|+.||=.|+|..=-.++-.. + ..|. =++|. .+..++.=.+++
T Consensus 314 EreIDWMAL~GiNlpLa~~GqEavw~~v~~~lG~t~~ei~~ff~GPAflaW~rMgNl~~wgGPLp~~w~~~q~~Lq~kIl 393 (914)
T 4a4a_A 314 EEFLDWCAMNGVNLVLDIIGQEEVLRRTLNEFGYSDEEVKEFISGPAYFAWFYMQNMTGFGGPLPNDWFEQRAELGRKMH 393 (914)
T ss_dssp HHHHHHHHHTTCCEEECCTTHHHHHHHHHGGGTCCHHHHHHHSCCTTCHHHHHTTSCCSTTCCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhhhhhhhHHHHHHHHHHcCCCHHHHHHhcCCchhhHHHHhcCccccCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999996654333100 0 0010 01233 234566667799
Q ss_pred HHHHHcCCEEEEEcCC----------CCCC----C---CCCCCCCCCCCCCCCC----hhHHHHHHHHHHHHHHHhCCCC
Q 013777 205 DWAEKYGVKVIVDLHA----------APGS----Q---NGNEHSATRDGFQEWG----DSNVADTVAVIDFLAARYANRP 263 (436)
Q Consensus 205 ~~a~~~Gi~VilDlH~----------~pg~----q---ng~~~sg~~~~~~~w~----~~~~~~~~~~~~~lA~ry~~~~ 263 (436)
+..++.||..||=-.. .|.. + +++.....++ +.+. +...+-...+++...+.|....
T Consensus 394 ~RmrelGM~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~gf~~~~~~~--~~~l~p~dplF~~i~~~F~~~q~~~yG~~~ 471 (914)
T 4a4a_A 394 DRMQSFGINPVLQGYSGMVPRDFKEKNQEAQTISQGGWCGFDRPDMLK--TYVNEGEADYFQKVADVFYEKQKEVFGDVT 471 (914)
T ss_dssp HHHHHHTCEEEEECCSCEECTTHHHHSTTCCEECCCEETTEECCEEEC--SSCCTTSCCHHHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHcCCeecCCCcCCCCChHHHhhCCCCeeecCCCCCCCCCchhcc--cccCCCCChHHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999993321 1211 1 1111100000 1111 3455566788999999999878
Q ss_pred ceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhccCCC-CCcEEEEEe
Q 013777 264 SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASG-LSRVVIDVH 333 (436)
Q Consensus 264 ~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~~~~~-~~nvv~~~H 333 (436)
.+.+.|++||-..+ +...+....+.+++++++.+|+++-++.+ |.......++.-.+. ..-+|+|.+
T Consensus 472 h~Y~~D~FnE~~~~--~~~~l~~~~~~v~~am~~~dp~AvWv~Qg-W~~~~~~~~L~~vp~~~~mlvLDL~ 539 (914)
T 4a4a_A 472 NFYGVDPFHQGGNT--GDLDNGKIYEIIQNKMIEHDNDAVWVIQN-WQGNPSNNKLEGLTKKDQAMVLDLF 539 (914)
T ss_dssp SEEECCTTTTSCCC--TTCCHHHHHHHHHHHHHHHCTTCEEEEEE-BTTBSCHHHHTTCSCGGGEEEEETT
T ss_pred cccccCccccCCCC--CCcCHHHHHHHHHHHHHHhCCCCEEEEcc-cCCCChHHHHhCCCCCCCEEEEEcc
Confidence 99999999994221 11337888999999999999998766653 432222334433232 445667655
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=93.42 E-value=0.078 Score=53.66 Aligned_cols=58 Identities=24% Similarity=0.490 Sum_probs=40.2
Q ss_pred HHHHHHHHhCCCCEEEec-Cc-------cccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRIP-VG-------WWIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRip-v~-------~~~~~~~~~~--~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
++-++.|+++|+++|=|+ +. ||...++... .|- =+..+.|+++|+.|+++||+||||+
T Consensus 18 ~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~-~Gt~~dfk~Lv~~aH~~Gi~VilD~ 85 (448)
T 1g94_A 18 QECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSR-GGNRAQFIDMVNRCSAAGVDIYVDT 85 (448)
T ss_dssp HHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBT-TBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCC-CCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 344689999999999983 31 1111122110 110 1578999999999999999999998
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=93.28 E-value=0.11 Score=53.86 Aligned_cols=58 Identities=21% Similarity=0.296 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCEEEecCcccccc--CCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAN--DPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~--~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|.=-+..-. .+..+..| + =+.++.|+++|+.|.++||+||||+
T Consensus 35 ~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (543)
T 2zic_A 35 SKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDL 99 (543)
T ss_dssp HTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 448899999999999832121100 01111111 1 1578999999999999999999998
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=93.18 E-value=0.073 Score=54.20 Aligned_cols=135 Identities=18% Similarity=0.259 Sum_probs=75.1
Q ss_pred HHHHHHHhCCCCEEEec-Ccccccc-CCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-----
Q 013777 161 EDFKFLSSNGINAVRIP-VGWWIAN-DPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ----- 225 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRip-v~~~~~~-~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~q----- 225 (436)
+.++.|+++|+|+|=|+ + +..-. ....+..| + =+..+.|+++|+.|+++||+||||+ |....+.
T Consensus 54 ~~LdyL~~LGv~~I~l~Pi-~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~f~~~ 132 (475)
T 2z1k_A 54 EKLPYLLDLGVEAIYLNPV-FASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQHL 132 (475)
T ss_dssp HTHHHHHHHTCCEEEECCC-EEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHH
T ss_pred HHhHHHHHcCCCEEEECCC-cCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccCCCHHHHHH
Confidence 44899999999999983 3 11000 00000000 0 1468999999999999999999998 6543220
Q ss_pred ------CCC---CC-CC-C------CCCCC-----------CCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 226 ------NGN---EH-SA-T------RDGFQ-----------EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 226 ------ng~---~~-sg-~------~~~~~-----------~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
+.+ -+ .+ . ...+. .+. +..++..++.++..+ .|. -..+ =+|..++..
T Consensus 133 ~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~-~~g-vDGf-R~D~~~~~~- 208 (475)
T 2z1k_A 133 MENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWI-RFG-VDGW-RLDVPNEIP- 208 (475)
T ss_dssp HHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHT-CCEE-EESSGGGCC-
T ss_pred HhcCCCCCCcceeecCCCCCcCCCCCCCccccCCCCCcCccccCCHHHHHHHHHHHHHHH-HCC-CCEE-eecccccCC-
Confidence 000 00 00 0 00011 111 445555666666666 442 2222 255566542
Q ss_pred CCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 277 PGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 277 ~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
.+ .+.+++.++|++..|+.+++-+
T Consensus 209 ----~~---~~~~~~~~~~~~~~p~~~~igE 232 (475)
T 2z1k_A 209 ----DP---TFWREFRQRVKGANPEAYIVGE 232 (475)
T ss_dssp ----CH---HHHHHHHHHHHHHCTTCEEEEC
T ss_pred ----HH---HHHHHHHHHHhhcCCCcEEEEE
Confidence 12 3666777888888888766544
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=93.11 E-value=0.071 Score=56.64 Aligned_cols=53 Identities=25% Similarity=0.429 Sum_probs=39.3
Q ss_pred HHHHHHHhCCCCEEEe-cCccccccCCCCCCCC--------c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIANDPTPPKPF--------V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~~~~~~~~~--------~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|=| || +. .+.. ..| + =+..+.|+++|+.|.++||+||||+
T Consensus 243 ~kLdYLk~LGvt~I~L~Pi-f~---s~~~-~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~ 306 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPI-FS---SLTY-HGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDG 306 (645)
T ss_dssp HTHHHHHHHTCCEEEECCC-EE---ESST-TCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCC-CC---CCCC-CCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEe
Confidence 4478999999999998 44 11 1110 011 0 1578999999999999999999998
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=93.09 E-value=0.17 Score=51.51 Aligned_cols=57 Identities=18% Similarity=0.287 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEe-cCccccccCC----CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIANDP----TPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~~~----~~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|=| |+. ...... .....|. =+..+.|+++|+.|.++||+||||+
T Consensus 47 ~~LdyL~~lGvt~I~l~Pi~-~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~ 118 (478)
T 2guy_A 47 DKLDYIQGMGFTAIWITPVT-AQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDV 118 (478)
T ss_dssp HTHHHHHTTTCCEEEECCCE-EECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhcCCCEEEeCCcc-cCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4578999999999999 442 111100 0000111 1468999999999999999999998
|
| >1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A | Back alignment and structure |
|---|
Probab=92.98 E-value=0.78 Score=43.10 Aligned_cols=125 Identities=13% Similarity=0.219 Sum_probs=82.7
Q ss_pred CCcccccEEEEecCCCc---eEEEcCCCC---CCcceEEEEEec------CCeEEEEEeCCceEEeecCCCCceEEEEec
Q 013777 1 MSTKFQKYIAAESGGGT---IVVANRTSA---SGWETFRLWRVN------ETFYNFRVNNKQFIGLENQGQGNGLVAVSN 68 (436)
Q Consensus 1 ~s~~~~~~~~a~~~g~~---~~~anr~~~---~~we~f~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~ 68 (436)
+||..|+||+-..-|.. -+.+ +.+. ..=+-|++.+.. .+-+.||..||+|+++-..++..-|.-..+
T Consensus 113 ~~vq~g~~~~~~~~~~~~~g~~~~-~~~~~~~~~~d~ftv~d~~~~~~LPk~~v~fKGdNgkYL~~~~~~~~~~LqF~~~ 191 (303)
T 1jlx_A 113 LHVQLGHYTQNYTVGGSFVSYLFA-ESSQIDTGSKDVFHVIDWKSIFQFPKGYVTFKGNNGKYLGVITINQLPCLQFGYD 191 (303)
T ss_dssp EETTTTEECEEECCSTTCCSEEEC-CCSSCCTTCTTCEEEEESGGGGCCCCSSEEEECTTSCEEEEEEETTEEEEEEEEC
T ss_pred EEEecCceEEeeecCCceeeEEEE-cccccccccCCcEEEEchhhhhhCcceeEEEEcCCCcEEEEEEcCCceeeEecCC
Confidence 47889999999887744 3444 2222 233447777764 347899999999999986544556888878
Q ss_pred CCCCC-ceEEEEEcCCCCcceEEec-cCCceEEEeeCeEEEcCCCCCCCCCCCCcccccccc
Q 013777 69 TAGYS-ETFQIVRKDGDSSRVRLSA-SNGMFIQAISETRLTADYGSSSWDDSDPSVFKLNIV 128 (436)
Q Consensus 69 ~~~~~-e~f~~~~~~~~~~~v~i~~-~nG~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~ 128 (436)
.++.. -.|+|+.+.++ .|+||. .+|+|-..+..+-+-|+...+.=+++....|+...+
T Consensus 192 d~~d~~~~~qv~~~~dG--~i~vks~~~~rFWR~s~~nWI~ad~~d~~~~~d~~~~F~pvrv 251 (303)
T 1jlx_A 192 NLNDPKVAHQMFVTSNG--TICIKSNYMNKFWRLSTDDWILVDGNDPRETNEAAALFRSDVH 251 (303)
T ss_dssp CTTCGGGCEEEEECTTS--CEEEEETTTTEEEEECGGGBEEEEECCHHHHCCGGGCEEEEEE
T ss_pred CCCCCccceEEEEcCCc--eEEEEecCCCchhhcCCCCeEEeCCCCCCCCCCCceeeEEEEe
Confidence 88877 57899888866 488899 789999998443444443211011234456665443
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=92.97 E-value=0.1 Score=53.40 Aligned_cols=58 Identities=21% Similarity=0.296 Sum_probs=39.3
Q ss_pred HHHHHH--------HhCCCCEEEec-CccccccCCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFL--------SSNGINAVRIP-VGWWIANDPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~i--------a~~G~N~VRip-v~~~~~~~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.| +++|+++|-|. +.-........+..| + =+.++.|+++|+.|+++||+||||+
T Consensus 31 ~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~ 102 (488)
T 1wza_A 31 EKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDL 102 (488)
T ss_dssp HTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 348899 99999999983 310000001111111 1 1468999999999999999999998
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=92.95 E-value=1.1 Score=38.13 Aligned_cols=100 Identities=17% Similarity=0.315 Sum_probs=68.5
Q ss_pred CcccccEEEEecC---CCceEEEcCCCCCCcceEEEEEecCCeEEEEEe-CCceEEeecCC--CCceEEEEecCCCCCce
Q 013777 2 STKFQKYIAAESG---GGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQG--QGNGLVAVSNTAGYSET 75 (436)
Q Consensus 2 s~~~~~~~~a~~~---g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~-~~~~~~~~~~g--~~~~~~a~~~~~~~~e~ 75 (436)
++..||.|-...+ .|+.|+.-.-.-+.-..|++...+++.|.||.. .++.+.+.+.+ .|..|+-..-..+..+.
T Consensus 33 n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~~~~~Q~ 112 (165)
T 3pg0_A 33 ARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQ 112 (165)
T ss_dssp ETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGC
T ss_pred ECCCCCEEEeCCCCCCCCCEEEEECCCCCccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEEcCCCCCccE
Confidence 4567888876543 245555444444567889999999999999987 67877775421 13456666666678899
Q ss_pred EEEEEcCCCCcceEEec-cCCceEEEeeC
Q 013777 76 FQIVRKDGDSSRVRLSA-SNGMFIQAISE 103 (436)
Q Consensus 76 f~~~~~~~~~~~v~i~~-~nG~~lq~~~~ 103 (436)
|.+...+++ .++|+. ..|+.|.+.+.
T Consensus 113 W~~~~~g~g--~~~i~~~~sg~cLdv~~~ 139 (165)
T 3pg0_A 113 WRLVDLGDG--YYKLVARHSGKALDVENA 139 (165)
T ss_dssp EEEEECSSS--CEEEEETTTCCEEEEGGG
T ss_pred EEEEECCCC--EEEEEECCCCcEEEcCCC
Confidence 999988654 466666 45888877643
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=92.89 E-value=0.17 Score=51.66 Aligned_cols=58 Identities=16% Similarity=0.181 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEecCccccccCC----CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIANDP----TPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~~----~~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|=|+=-+...... .....|. =+..+.|+++|+.|+++||+||||+
T Consensus 47 ~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~ 118 (484)
T 2aaa_A 47 DHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (484)
T ss_dssp HTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 44799999999999994222211000 0000111 1468999999999999999999998
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=92.80 E-value=0.15 Score=53.67 Aligned_cols=59 Identities=14% Similarity=0.046 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccC-----CCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIAND-----PTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~-----~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+-++.|+++|+|+|-|+=-+..... ...+..| + =+..+.|+++|+.|+++||+||||+
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 219 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDV 219 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 35588999999999998321211000 0000011 1 1578999999999999999999998
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=92.71 E-value=0.17 Score=53.18 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=39.3
Q ss_pred HHHHHHHhCCCCEEEecCccccccC--CCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAND--PTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~--~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|.=-+..-.. +..+..| + =+..+.|+++|+.|+++||+||||+
T Consensus 44 ~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 108 (589)
T 3aj7_A 44 SKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDL 108 (589)
T ss_dssp HTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4478999999999998321211000 1101011 0 1568999999999999999999998
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=92.39 E-value=0.092 Score=55.37 Aligned_cols=135 Identities=15% Similarity=0.202 Sum_probs=73.3
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc-----ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCC--
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI-----ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN-- 226 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~-----~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qn-- 226 (436)
+.++.|+++|+|+|=| |+.-.. ..++.. +++- =+..+.|+++|+.|.++||+||||+ |..+.+..
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~-~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~ 226 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAP-YGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYLS 226 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGG-GCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHH
T ss_pred HHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcC-CCCHHHHHHHHHHHHHCCCEEEEEecccccccCCcccc
Confidence 4479999999999998 442100 111110 0110 1468999999999999999999998 54432210
Q ss_pred ---C-CCCCCCCCCCCCCC-------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHH
Q 013777 227 ---G-NEHSATRDGFQEWG-------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAV 295 (436)
Q Consensus 227 ---g-~~~sg~~~~~~~w~-------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aI 295 (436)
+ +.+. .....|. +..++..++.++..++.|.=+ .+ =+|+++.-... .+. .+.+++.++|
T Consensus 227 ~~~~~~~~~---~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~gvD-Gf-R~D~~~~i~~~-~~~----~fl~~~~~~v 296 (602)
T 2bhu_A 227 SYAPSYFTD---RFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFD-GL-RLDATPYMTDD-SET----HILTELAQEI 296 (602)
T ss_dssp HHCGGGEEE---EEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCS-EE-EETTGGGCCCC-SSS----CHHHHHHHHH
T ss_pred ccCcccccC---CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCC-EE-EEechHhhhcc-chH----HHHHHHHHHH
Confidence 0 0000 0012232 445556667777777655321 11 13444332110 011 3556666777
Q ss_pred HhhCCCeEEEEe
Q 013777 296 RKYTSTAYVIMS 307 (436)
Q Consensus 296 R~~~p~~~Viv~ 307 (436)
++. |+.++|-+
T Consensus 297 ~~~-~~~~li~E 307 (602)
T 2bhu_A 297 HEL-GGTHLLLA 307 (602)
T ss_dssp HTT-CSCCEEEE
T ss_pred hhc-CCeEEEEE
Confidence 877 76666554
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=92.31 E-value=0.24 Score=52.82 Aligned_cols=59 Identities=19% Similarity=0.213 Sum_probs=40.0
Q ss_pred HHHHHHHhCCCCEEEecCcccc----ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWI----ANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~----~~~~~~~~~~~--~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+.++.|+++|+++|-|+=-+.. ..++....... =+.++.|+++|+.|+++||+||||+-
T Consensus 64 ~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V 128 (669)
T 3k8k_A 64 QKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDYV 128 (669)
T ss_dssp TTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 3488999999999998421110 11111100011 15789999999999999999999973
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=92.14 E-value=0.21 Score=53.35 Aligned_cols=58 Identities=19% Similarity=0.251 Sum_probs=39.9
Q ss_pred HHHHHHHhCCCCEEEecCccccccCCC-----CCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIANDPT-----PPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~~~-----~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|+=-+.....|. ....|+ =+.++.|+++|+.|+++||+||||+
T Consensus 56 ~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 128 (686)
T 1qho_A 56 QKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (686)
T ss_dssp HTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 447899999999999943222110010 000111 1468999999999999999999998
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=92.03 E-value=0.25 Score=50.39 Aligned_cols=58 Identities=29% Similarity=0.314 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCEEEecCccccc------cCC---CCCCC------Cc--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA------NDP---TPPKP------FV--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~------~~~---~~~~~------~~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|+=-+... .++ ..++. .+ =+..+.|+++|+.|.++||+||||+
T Consensus 29 ~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 103 (485)
T 1wpc_A 29 SDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 103 (485)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999984222100 000 00001 11 1568999999999999999999998
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=91.92 E-value=0.24 Score=50.99 Aligned_cols=58 Identities=22% Similarity=0.182 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCEEEecCccccc------cCC---CCCCC------Cc--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA------NDP---TPPKP------FV--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~------~~~---~~~~~------~~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|=|+=-+... .++ ..... .+ =+..+.|+++|+.|.++||+||||+
T Consensus 28 ~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 102 (515)
T 1hvx_A 28 NEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (515)
T ss_dssp HHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45799999999999984222110 000 00000 11 1578999999999999999999997
|
| >2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* | Back alignment and structure |
|---|
Probab=91.91 E-value=1.3 Score=49.62 Aligned_cols=100 Identities=11% Similarity=0.122 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHc-CCEEEEEc---CCCCCCC----CC-------CC-CCCCCCCCC---------CCC-hhHHHHHHH
Q 013777 197 SKVLDNAFDWAEKY-GVKVIVDL---HAAPGSQ----NG-------NE-HSATRDGFQ---------EWG-DSNVADTVA 250 (436)
Q Consensus 197 l~~ld~~v~~a~~~-Gi~VilDl---H~~pg~q----ng-------~~-~sg~~~~~~---------~w~-~~~~~~~~~ 250 (436)
++.|+++|+.|.++ ||+||||+ |..+++. +. +. .....++.. .+. +..++..++
T Consensus 581 ~~efk~LV~~~H~~~GI~VILDvV~NHt~~~~~~~~~~~~d~~~p~yy~~~~p~~g~~~~~tg~~dln~~~p~Vr~~i~d 660 (1083)
T 2fhf_A 581 IKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESATCCSDSAPEHRMFAKLIAD 660 (1083)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHSTTTSBCBCTTTCCBCCTTSSEEBCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeccccCcCCCccchhccccCCCCCceeecCCCCCceecCCccCCcCcCCHHHHHHHHH
Confidence 78999999999998 99999998 5443320 00 00 000001111 111 344556667
Q ss_pred HHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 251 VIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 251 ~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
.+++.+++|+=+ .+ =+|+++.. ...+..+++++||+.+|+.++|-+
T Consensus 661 ~l~~W~~e~gVD-Gf-R~D~a~~~---------~~~~~~~~~~~l~~~~p~~~ligE 706 (1083)
T 2fhf_A 661 SLAVWTTDYKID-GF-RFDLMLYH---------PKAQILSAWERIKALNPDIYFFGE 706 (1083)
T ss_dssp HHHHHHHHHCCC-EE-EETTGGGS---------BHHHHHHHHHHHHTTCTTCEEEEC
T ss_pred HHHHHHHHhCCc-EE-EEeCcccC---------CHHHHHHHHHHHHHhCCCeEEEEe
Confidence 777778777422 22 25566542 134566777888999998765543
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=91.88 E-value=0.096 Score=53.38 Aligned_cols=63 Identities=22% Similarity=0.276 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCCCEEEecCcccc----------ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEEc---CCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWI----------ANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~----------~~~~~~~~~~~--~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg 223 (436)
++-++.|+++|+++|=|+=-+.. ..++... ..+ =+..+.|+++|+.|.++||+||||+ |..+.
T Consensus 26 ~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy-~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (471)
T 1jae_A 26 DECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDESAFTDMTRRCNDAGVRIYVDAVINHMTGM 103 (471)
T ss_dssp HHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHHHHHHHHHHHHHTTCEEEEEECCSBCCSS
T ss_pred HHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccc-cccCCCCCHHHHHHHHHHHHHCCCEEEEEEecccccCC
Confidence 44468999999999998422211 1111110 011 1578999999999999999999998 55443
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=91.87 E-value=0.27 Score=50.09 Aligned_cols=58 Identities=22% Similarity=0.240 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEecCccccc------cCC---CCCCC------Ccc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA------NDP---TPPKP------FVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~------~~~---~~~~~------~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|+=-+... .++ ..++. .++ +..+.|+++|+.|.++||+||||+
T Consensus 27 ~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 101 (480)
T 1ud2_A 27 DDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDV 101 (480)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999984222100 000 10001 111 568999999999999999999997
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=91.85 E-value=0.25 Score=51.43 Aligned_cols=58 Identities=26% Similarity=0.366 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEecCcccccc--CCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAN--DPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~--~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|=|+=-+..-. .+..+..| + =+..+.|+++|+.|+++||+||||+
T Consensus 35 ~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~ 99 (555)
T 2ze0_A 35 EKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDL 99 (555)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 458899999999999832222110 01111011 1 1468999999999999999999998
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=91.81 E-value=0.32 Score=52.07 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=39.8
Q ss_pred HHHHHHHhCCCCEEEecCccccccC-------------CCCCCCC---------c-----cchHHHHHHHHHHHHHcCCE
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAND-------------PTPPKPF---------V-----GGSSKVLDNAFDWAEKYGVK 213 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~-------------~~~~~~~---------~-----~~~l~~ld~~v~~a~~~Gi~ 213 (436)
+.++.|+++|||+|=|+=-+..... ...+.|| . =+..+.|+++|+.|.++||+
T Consensus 257 ~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~GI~ 336 (695)
T 3zss_A 257 RRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGLE 336 (695)
T ss_dssp GGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 3488999999999998432211100 0001111 1 14689999999999999999
Q ss_pred EEEEcC
Q 013777 214 VIVDLH 219 (436)
Q Consensus 214 VilDlH 219 (436)
||||+-
T Consensus 337 VilD~V 342 (695)
T 3zss_A 337 IALDFA 342 (695)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 999973
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=91.76 E-value=0.13 Score=55.04 Aligned_cols=58 Identities=9% Similarity=0.184 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCCEEEecCcccccc-CCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAN-DPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~-~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|=|.=-+..-. .+..+..| + =+..+.|+++|+.|+++||+||||+
T Consensus 269 ~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 332 (696)
T 4aee_A 269 KHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDI 332 (696)
T ss_dssp TTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEec
Confidence 458899999999999832111100 00000001 1 1568999999999999999999998
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=91.73 E-value=0.28 Score=49.96 Aligned_cols=58 Identities=28% Similarity=0.261 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCEEEecCccccc------cCC---CCCCC------Cc--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA------NDP---TPPKP------FV--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~------~~~---~~~~~------~~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|+=-+... .++ ..++. .+ =+..+.|+++|+.|.++||+||||+
T Consensus 25 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD~ 99 (483)
T 3bh4_A 25 NDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (483)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999984222100 000 00000 11 1568999999999999999999997
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=91.63 E-value=0.12 Score=51.86 Aligned_cols=58 Identities=24% Similarity=0.356 Sum_probs=39.3
Q ss_pred HHHHHHHhCCCCEEEecCccccccCC------------CCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIANDP------------TPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~~------------~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|+=-+...... ..+..| + -+..+.|+++|+.|.++||+||||+
T Consensus 21 ~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~VilD~ 95 (422)
T 1ua7_A 21 HNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDA 95 (422)
T ss_dssp HTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 44789999999999983211111000 000001 0 1578999999999999999999998
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=91.59 E-value=0.34 Score=50.50 Aligned_cols=61 Identities=28% Similarity=0.476 Sum_probs=42.3
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc-----ccCCCCCCCCc----cchHHHHHHHHHHHHHcCCEEEEEc---CCCCC
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI-----ANDPTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPG 223 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~-----~~~~~~~~~~~----~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg 223 (436)
+.+..|+++|+++|=| |+.-.. ..++. ..|. =+..+.|.++|+.|.++||+||+|+ |..+.
T Consensus 123 ~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~--~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 196 (558)
T 3vgf_A 123 RKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGV--YLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPE 196 (558)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCC--EEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCSS
T ss_pred HHHHHHHHcCCcEEEECCcccCCCCCCcCcccc--cccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccCC
Confidence 4589999999999998 441100 11111 1111 1468999999999999999999999 66544
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=91.58 E-value=0.2 Score=50.39 Aligned_cols=58 Identities=28% Similarity=0.298 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCEEEecCcccc-------ccCCCC---CCC------Ccc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWI-------ANDPTP---PKP------FVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~-------~~~~~~---~~~------~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|+=-+.. ..++.. ++. .++ +..+.|+++|+.|+++||+||||+
T Consensus 32 ~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~ 107 (435)
T 1mxg_A 32 SKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADV 107 (435)
T ss_dssp HHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4588999999999998421111 111100 000 111 468999999999999999999998
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=91.41 E-value=0.13 Score=54.98 Aligned_cols=58 Identities=21% Similarity=0.234 Sum_probs=39.7
Q ss_pred HHHH--HHHhCCCCEEEecCccccccCC--------CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFK--FLSSNGINAVRIPVGWWIANDP--------TPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~--~ia~~G~N~VRipv~~~~~~~~--------~~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++ .|+++|+++|=|+=-+.....+ .....|. =+.++.|+++|+.|+++||+||||+
T Consensus 59 ~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 136 (686)
T 1d3c_A 59 NKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDF 136 (686)
T ss_dssp HHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4588 9999999999993222111000 0001111 1469999999999999999999998
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=91.32 E-value=0.2 Score=52.88 Aligned_cols=144 Identities=17% Similarity=0.225 Sum_probs=78.8
Q ss_pred HHHHHHHHhCCCCEEEe-cCcccc-----ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWI-----ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNG 227 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~-----~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~qng 227 (436)
+.-++.|+++|+|+|=| |+.-.. ..++.. +.+- =+..+.|+++|+.|.++||+||||+ |..+.. .+
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~-~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~-~~ 236 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRR-FGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDD-FA 236 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGG-GSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCST-TS
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCcc-CCCHHHHHHHHHHHHHCCCEEEEEEecCcccCcc-ch
Confidence 33459999999999998 552110 111110 0110 1468999999999999999999997 543321 11
Q ss_pred CCC---------CCCCCC-CCCCC--------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecC------CCCC------
Q 013777 228 NEH---------SATRDG-FQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELINE------PLAP------ 277 (436)
Q Consensus 228 ~~~---------sg~~~~-~~~w~--------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NE------P~~~------ 277 (436)
+.. ...+.+ ...|. +..++..++.++..+++|.=+- + =+|.+.. +..+
T Consensus 237 ~~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gvDG-f-R~D~~~~~~~~d~~~~~g~~~~~ 314 (617)
T 1m7x_A 237 LAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDA-L-RVDAVASMIYRDYSRKEGEWIPN 314 (617)
T ss_dssp STTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCE-E-EECCSHHHHCC------------
T ss_pred hhhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHhCcCE-E-EEcchhhhhhccccccccccccc
Confidence 110 000001 12232 4556667778888887764221 1 1222111 0000
Q ss_pred ---CCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 278 ---GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 278 ---~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
......-..+.+++.++|++..|+.++|-+
T Consensus 315 ~~~~~~~~~~~~fl~~~~~~v~~~~p~~~~iaE 347 (617)
T 1m7x_A 315 EFGGRENLEAIEFLRNTNRILGEQVSGAVTMAE 347 (617)
T ss_dssp --CTTCCHHHHHHHHHHHHHHHHSSTTCEEEEC
T ss_pred cccccCCchHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 011123467899999999999998877665
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=91.14 E-value=0.34 Score=52.15 Aligned_cols=66 Identities=27% Similarity=0.531 Sum_probs=42.8
Q ss_pred CCHHHHHHHHhCCCCEEEe-cCcccc--------------ccCCCC---CCC-Ccc-----chHHHHHHHHHHHHHcCCE
Q 013777 158 ITDEDFKFLSSNGINAVRI-PVGWWI--------------ANDPTP---PKP-FVG-----GSSKVLDNAFDWAEKYGVK 213 (436)
Q Consensus 158 ite~d~~~ia~~G~N~VRi-pv~~~~--------------~~~~~~---~~~-~~~-----~~l~~ld~~v~~a~~~Gi~ 213 (436)
+.+.-++.|+++|+|+|=| ||.-.. ..++.. +++ |-. ..++.|+++|+.|.++||+
T Consensus 203 ~~~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~ 282 (718)
T 2vr5_A 203 ASEQMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIE 282 (718)
T ss_dssp TSHHHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCE
T ss_pred hcchhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCE
Confidence 3334699999999999998 442110 111110 111 111 1279999999999999999
Q ss_pred EEEEc---CCCCC
Q 013777 214 VIVDL---HAAPG 223 (436)
Q Consensus 214 VilDl---H~~pg 223 (436)
||||+ |...+
T Consensus 283 VilDvV~NH~~~~ 295 (718)
T 2vr5_A 283 VIIDVVYNHTAEG 295 (718)
T ss_dssp EEEEECCSCCSSC
T ss_pred EEEEeccCcccCc
Confidence 99998 55443
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=91.04 E-value=0.38 Score=50.88 Aligned_cols=58 Identities=12% Similarity=0.202 Sum_probs=39.5
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc------ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI------ANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~------~~~~~~~~~~~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|=| |+.-.. ..++......+ =+.++.|+++|+.|+++||+||+|+
T Consensus 117 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~ 183 (628)
T 1g5a_A 117 DKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (628)
T ss_dssp TTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3478999999999998 442100 11111100011 1578999999999999999999998
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=91.00 E-value=0.16 Score=53.85 Aligned_cols=58 Identities=19% Similarity=0.327 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCCCEEEe-cCccccccC--------CCC------CCC-Ccc------chHHHHHHHHHHHHHcCCEEEEE
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWIAND--------PTP------PKP-FVG------GSSKVLDNAFDWAEKYGVKVIVD 217 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~~~~--------~~~------~~~-~~~------~~l~~ld~~v~~a~~~Gi~VilD 217 (436)
.+.++.|+++|+|+|-| |+. ..... +.. +++ |.. +..+.|.++|+.|.++||+||||
T Consensus 123 ~~~l~~l~~lG~~~v~l~Pi~-~~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD 201 (637)
T 1gjw_A 123 MLLLPFVKSLGADAIYLLPVS-RMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILD 201 (637)
T ss_dssp HHTHHHHHHHTCCEEEECCCE-EECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCe-ecccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEE
Confidence 45689999999999998 441 11000 000 011 110 12799999999999999999999
Q ss_pred c
Q 013777 218 L 218 (436)
Q Consensus 218 l 218 (436)
+
T Consensus 202 ~ 202 (637)
T 1gjw_A 202 F 202 (637)
T ss_dssp E
T ss_pred E
Confidence 8
|
| >4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A | Back alignment and structure |
|---|
Probab=90.98 E-value=0.21 Score=54.78 Aligned_cols=23 Identities=13% Similarity=0.270 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEc
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.++.++++|+.|.++||+||||+
T Consensus 377 ~~~efk~LV~~aH~~GIkVIlDv 399 (884)
T 4aio_A 377 RIIEYRQMVQALNRIGLRVVMDV 399 (884)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCceeeee
Confidence 47789999999999999999998
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=90.91 E-value=0.28 Score=51.63 Aligned_cols=58 Identities=24% Similarity=0.173 Sum_probs=39.8
Q ss_pred HHHHHHHhCCCCEEEecCccccc-------cCC---CCCCC------Ccc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA-------NDP---TPPKP------FVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~-------~~~---~~~~~------~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|=|+=-+... .++ ..++. .++ +..+.|+++|+.|+++||+||||+
T Consensus 154 ~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 229 (599)
T 3bc9_A 154 ERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDA 229 (599)
T ss_dssp HHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 55889999999999984222100 000 00000 111 578999999999999999999998
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=90.72 E-value=0.39 Score=50.96 Aligned_cols=58 Identities=16% Similarity=0.148 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc------ccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI------ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~------~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|=| |+.-.. ..++......++ +.++.|+++|+.|+++||+||||+
T Consensus 110 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~ 176 (644)
T 3czg_A 110 ERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADF 176 (644)
T ss_dssp HTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4478999999999998 442110 001110000111 568999999999999999999998
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=90.49 E-value=0.33 Score=51.81 Aligned_cols=58 Identities=21% Similarity=0.251 Sum_probs=40.2
Q ss_pred HHHH--HHHhCCCCEEEecCccccccCCC-------CCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFK--FLSSNGINAVRIPVGWWIANDPT-------PPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~--~ia~~G~N~VRipv~~~~~~~~~-------~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++ .|+++|+++|=|+=-+.....+. ....|. =+.++.|+++|+.|+++||+||||+
T Consensus 56 ~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~ 132 (680)
T 1cyg_A 56 NKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDF 132 (680)
T ss_dssp HHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4588 99999999999843222110000 001121 1569999999999999999999998
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=90.37 E-value=0.35 Score=51.65 Aligned_cols=58 Identities=24% Similarity=0.284 Sum_probs=39.7
Q ss_pred HHHH--HHHhCCCCEEEecCccccccCC---------CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFK--FLSSNGINAVRIPVGWWIANDP---------TPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~--~ia~~G~N~VRipv~~~~~~~~---------~~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++ .|+++|+++|=|+=-+.....+ .....|+ =+.++.|+++|+.|+++||+||||+
T Consensus 59 ~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD~ 137 (683)
T 3bmv_A 59 NKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDF 137 (683)
T ss_dssp HHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4588 9999999999984322210000 0001111 1468999999999999999999998
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=90.33 E-value=0.45 Score=51.15 Aligned_cols=100 Identities=17% Similarity=0.275 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHcCCEEEEEc---CCCCCC-----CCCCCCCCCCCCC--CCCC--------hhHHHHHHHHHHHHHHH
Q 013777 197 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS-----QNGNEHSATRDGF--QEWG--------DSNVADTVAVIDFLAAR 258 (436)
Q Consensus 197 l~~ld~~v~~a~~~Gi~VilDl---H~~pg~-----qng~~~sg~~~~~--~~w~--------~~~~~~~~~~~~~lA~r 258 (436)
.+.|.++|+.|.++||+||||+ |..+++ ...+.+....++. ..|. +..++..++.++..++.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W~~e 333 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT 333 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCSCHHHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccCcccccccCCCeeEEeCCCCCCccccCCCCcccCCHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999997 443321 0011110000111 0111 34456666777777877
Q ss_pred hCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 259 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 259 y~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
|.=+ .+ =+|++.+. +.+ +++++..++++.+|+.++|-+
T Consensus 334 ~~vD-Gf-R~D~~~~~-----~~~----~~~~~~~~~~~~~p~~~ligE 371 (714)
T 2ya0_A 334 YKVD-GF-RFDMMGDH-----DAA----SIEEAYKAARALNPNLIMLGE 371 (714)
T ss_dssp HCCC-EE-EETTGGGS-----BHH----HHHHHHHHHHHHCTTCEEEEC
T ss_pred hCce-EE-EEeCCCCC-----CHH----HHHHHHHHHHHhCCCeEEEec
Confidence 7422 22 24555432 223 445677788888998766544
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* | Back alignment and structure |
|---|
Probab=90.18 E-value=0.48 Score=51.67 Aligned_cols=58 Identities=16% Similarity=0.146 Sum_probs=40.2
Q ss_pred HHHHHHHhCCCCEEEecCccccc-------------cCCC---CCC----CCccchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA-------------NDPT---PPK----PFVGGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~-------------~~~~---~~~----~~~~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+.+..|+++|+++|=|+=-+... .++. ... + .-+..+.|+++|+.|+++||+||||+-
T Consensus 637 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~-~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 637 KNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPN-KYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp HTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCB-TTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 35999999999999984221110 0110 000 1 114689999999999999999999984
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.88 E-value=0.45 Score=51.44 Aligned_cols=28 Identities=25% Similarity=0.411 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHcCCEEEEEc---CCCCCC
Q 013777 197 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS 224 (436)
Q Consensus 197 l~~ld~~v~~a~~~Gi~VilDl---H~~pg~ 224 (436)
.+.|.++|+.|.++||+||||+ |...++
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~ 302 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVYNHTAEGG 302 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSCTTCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccccCcc
Confidence 8999999999999999999998 555443
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=89.66 E-value=0.5 Score=49.90 Aligned_cols=139 Identities=17% Similarity=0.290 Sum_probs=72.0
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc-----ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEcC---CCCCCCCCC
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI-----ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH---AAPGSQNGN 228 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~-----~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH---~~pg~qng~ 228 (436)
+.++.|+++|+|+|-| |+.-.. ..++.. +.+- =+..+.|+++|+.|.++||+||||+- ..+.+.. .
T Consensus 158 ~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~-~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~-~ 235 (618)
T 3m07_A 158 AKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSA-YGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGPEGNY-L 235 (618)
T ss_dssp TTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTT-TCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCC-H
T ss_pred HHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcC-cCCHHHHHHHHHHHHHCCCEEEEeecCccCCCCccc-c
Confidence 4579999999999998 441100 011110 0010 14689999999999999999999983 3222100 0
Q ss_pred C--CCC--CCCCCCCCC-------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHh
Q 013777 229 E--HSA--TRDGFQEWG-------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK 297 (436)
Q Consensus 229 ~--~sg--~~~~~~~w~-------~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~ 297 (436)
. +.. .......|. +..++..++.+...++.|.=+ .+ =+|....-.. ..+ ..+.+++.++||+
T Consensus 236 ~~~~~~~~~~~~~~~wg~~ln~~~p~V~~~i~~~~~~w~~~~gvD-Gf-R~D~~~~~~~-~~~----~~f~~~l~~~v~~ 308 (618)
T 3m07_A 236 PLLAPAFFHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHLD-GL-RFDAIDQIED-SSA----RHVLVEIAQRIRE 308 (618)
T ss_dssp HHHCGGGEEEEEEETTEEEECTTSHHHHHHHHHHHHHHHHHTTCS-EE-EETTGGGCCC-CSS----SCHHHHHHHHHHH
T ss_pred cccCchhhcCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCcc-EE-Eecchhhhcc-cch----HHHHHHHHHHHHH
Confidence 0 000 000011222 445566667777777666321 11 1222222110 001 2366677788888
Q ss_pred hCCC-eEEEEeC
Q 013777 298 YTST-AYVIMSN 308 (436)
Q Consensus 298 ~~p~-~~Viv~~ 308 (436)
..|+ ..+++..
T Consensus 309 ~~p~~~~~li~E 320 (618)
T 3m07_A 309 DITDRPIHLTTE 320 (618)
T ss_dssp HCCSSCCEEEEC
T ss_pred hCCCCCEEEEEE
Confidence 8765 2344443
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=89.53 E-value=0.51 Score=52.25 Aligned_cols=58 Identities=14% Similarity=0.286 Sum_probs=41.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccC--------C--C-----------CCCCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIAND--------P--T-----------PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~--------~--~-----------~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+.++.|+++|+++|=|+=-+....+ . . +...| +..+.|+++|+.|+++||+||||+
T Consensus 856 ~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~y--Gt~edfk~LV~alH~~GI~VIlDv 933 (1108)
T 3ttq_A 856 AKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKY--GTDGDLRATIQALHHANMQVMADV 933 (1108)
T ss_dssp HHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSS--CCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCC--CCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35599999999999999533321111 0 0 00111 478999999999999999999998
Q ss_pred C
Q 013777 219 H 219 (436)
Q Consensus 219 H 219 (436)
-
T Consensus 934 V 934 (1108)
T 3ttq_A 934 V 934 (1108)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=88.95 E-value=0.44 Score=50.46 Aligned_cols=60 Identities=17% Similarity=0.230 Sum_probs=41.4
Q ss_pred HHHHHHHh-CCCCEEEe-cCc----cccccCCCC---CCCCccchHHHHHHHHHHHHHcC--C--EEEEEc---CCCC
Q 013777 161 EDFKFLSS-NGINAVRI-PVG----WWIANDPTP---PKPFVGGSSKVLDNAFDWAEKYG--V--KVIVDL---HAAP 222 (436)
Q Consensus 161 ~d~~~ia~-~G~N~VRi-pv~----~~~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~G--i--~VilDl---H~~p 222 (436)
+-++.|++ +|+|+|=| ||. +| ..++.. +.|- =+..+.|+++|+.|.++| | +||||+ |..+
T Consensus 195 ~~LdyLk~~LGvt~I~L~Pi~~~~~~~-GYd~~dy~~id~~-~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~~~ 270 (637)
T 1ji1_A 195 QKLGYIKKTLGANILYLNPIFKAPTNH-KYDTQDYMAVDPA-FGDNSTLQTLINDIHSTANGPKGYLILDGVFNHTGD 270 (637)
T ss_dssp HTHHHHHTTTCCCEEEESCCEECSSSS-CCSCSEEEEECTT-TCCHHHHHHHHHHHHCSSSSSCCEEEEEECCSBCCT
T ss_pred HhHHHHHhccCCCEEEECCCccCCCCC-CcCccchhhhccc-cCCHHHHHHHHHHHHhCCCCccceEEEEECcccCCC
Confidence 44789999 99999998 442 11 111110 0111 146899999999999999 9 999998 5544
|
| >1hcd_A Hisactophilin; actin binding; NMR {Dictyostelium discoideum} SCOP: b.42.5.2 PDB: 1hce_A | Back alignment and structure |
|---|
Probab=88.83 E-value=6.6 Score=30.07 Aligned_cols=96 Identities=9% Similarity=0.202 Sum_probs=71.9
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEEcCC
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDG 83 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~~ 83 (436)
-+|.||+||.- .|-.--.--.-=--|-+-+-+ +.++||+.-|+||++.. ...|--.----|.---|.+.--.
T Consensus 9 hhgh~lsae~~---~vkthhghhdhhthfhvenhg-~kvalrth~gkyvsigd---hkqvylshh~hg~hslfhlehh~- 80 (118)
T 1hcd_A 9 HHGHFLSAEGE---AVKTHHGHHDHHTHFHVENHG-GKVALKTHCGKYLSIGD---HKQVYLSHHLHGDHSLFHLEHHG- 80 (118)
T ss_dssp STTCEEEEETT---EEEEECSCSSCCCCCEEEEET-TEEEEESSSSCEEEEEE---TTEEEEECCCSSSSSSBEEEEET-
T ss_pred ccCeeeecccc---ccccccCcccccceEEeecCC-ceEEEEeccCcEEEecC---CceEEEEeeecCcceeEeeeccC-
Confidence 36899999975 554444444444567776664 58999999999999975 34566666777888889998875
Q ss_pred CCcceEEeccCCceEEEeeCeEEEcC
Q 013777 84 DSSRVRLSASNGMFIQAISETRLTAD 109 (436)
Q Consensus 84 ~~~~v~i~~~nG~~lq~~~~~~v~a~ 109 (436)
..|.||.-+-.|+.+..-..|...
T Consensus 81 --gkvsikghhhhyi~~d~hghv~t~ 104 (118)
T 1hcd_A 81 --GKVSIKGHHHHYISADHHGHVSTK 104 (118)
T ss_dssp --TEEEEECSTTCEEEECGGGCEEEE
T ss_pred --CEEEEecccceEEeccCCcccccc
Confidence 569999999999998866555433
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* | Back alignment and structure |
|---|
Probab=88.59 E-value=0.62 Score=49.49 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEecCccccccCCCCCCCC--------c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPF--------V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~--------~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+++|=|+=.+.... ......| + =+..+.|+++|+.|+++||+||+|+
T Consensus 115 ~~LdyL~~lGv~~v~l~P~~~~~~-~~~~~GY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~ 181 (655)
T 3ucq_A 115 ERLDYLEGLGVKYLHLMPLLRPRE-GENDGGYAVQDYRAVRPDLGTMDDLSALARALRGRGISLVLDL 181 (655)
T ss_dssp TTHHHHHHTTCCEEEECCCEEECS-SCCGGGTSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCcCCCC-CCCCCCcCCcCcCccCccCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 447899999999999953221100 0000111 1 1568999999999999999999998
|
| >2ddx_A Beta-1,3-xylanase; glycoside hydrolase, TIM barrel, hydrola; 0.86A {Vibrio SP} | Back alignment and structure |
|---|
Probab=88.57 E-value=2.5 Score=40.87 Aligned_cols=118 Identities=19% Similarity=0.172 Sum_probs=65.2
Q ss_pred HHHHHHHHHhCCCCceeEEEeecCCCCC--CCChhHHHHHHHHHHHHHHhhC--CCeEEEEeC-CCCCCChhhhhccCCC
Q 013777 250 AVIDFLAARYANRPSLAAIELINEPLAP--GVALDTLKSYYKAGYDAVRKYT--STAYVIMSN-RLGPADHKELLSFASG 324 (436)
Q Consensus 250 ~~~~~lA~ry~~~~~v~g~eL~NEP~~~--~~~~~~~~~~~~~~~~aIR~~~--p~~~Viv~~-~~~~~~~~~~~~~~~~ 324 (436)
+.|+.+|+..++...-+-+-+..|.... ..+++.+++.++.+++++|+.+ ++.+.+.+. ...+.....+..+..+
T Consensus 93 ~~i~~~a~~l~~~gvPV~~R~~HEmnG~W~~~~p~~y~~~wr~v~d~~r~~g~~~N~~wvWspn~~~p~~~~~~~~~YPG 172 (333)
T 2ddx_A 93 ANIDTLLNTLAGYDRPVYLRWAYEVDGPWNGHSPSGIVTSFQYVHDRIIALGHQAKISLVWQVASYCPTPGGQLDQWWPG 172 (333)
T ss_dssp HHHHHHHHHHHTTCSCEEEEETSSTTCGGGCCCHHHHHHHHHHHHHHHHHHTCTTTEEEEEECCCCTTSCSSCCGGGCCC
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccCCCCcCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEeCCCCCCCCCCchhhcCCC
Confidence 3455555555443222338899998853 3567899999999999999985 454444442 1111111223333223
Q ss_pred CC-cEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeeccccc
Q 013777 325 LS-RVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE 381 (436)
Q Consensus 325 ~~-nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~ 381 (436)
++ =.++.+-.|.+-.. +. ..++ .+..+.+..++|++|+|+|..
T Consensus 173 DdyVDivG~D~Y~~~~~-----~~----~~~~-----~~~~~a~~~~KPi~i~E~G~~ 216 (333)
T 2ddx_A 173 SEYVDWVGLSYFAPQDC-----NW----DRVN-----EAAQFARSKGKPLFLNESTPQ 216 (333)
T ss_dssp GGGCSEEEEEESSGGGG-----TT----HHHH-----HHHHHHHHHTCCEEEEEECCT
T ss_pred CCEEEEEEEeccCCCCc-----CH----HHHH-----HHHHHHhcCCCcEEEeccCCc
Confidence 32 34677777854110 11 1111 112223444667999999965
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=88.51 E-value=0.43 Score=50.71 Aligned_cols=66 Identities=24% Similarity=0.409 Sum_probs=43.0
Q ss_pred CCHHHHHHHHhCCCCEEEe-cCcccc--------------ccCCC---CCCC-Cccc---hHHHHHHHHHHHHHcCCEEE
Q 013777 158 ITDEDFKFLSSNGINAVRI-PVGWWI--------------ANDPT---PPKP-FVGG---SSKVLDNAFDWAEKYGVKVI 215 (436)
Q Consensus 158 ite~d~~~ia~~G~N~VRi-pv~~~~--------------~~~~~---~~~~-~~~~---~l~~ld~~v~~a~~~Gi~Vi 215 (436)
+.+.-++.|+++|+|+|=| |+.-.. ..++. .+++ |-.+ ..+.|+++|+.|.++||+||
T Consensus 180 ~~~~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~Vi 259 (657)
T 2wsk_A 180 GHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVI 259 (657)
T ss_dssp TSHHHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEE
T ss_pred hcccchHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEE
Confidence 3334699999999999998 442110 01110 0011 2111 58999999999999999999
Q ss_pred EEc---CCCCC
Q 013777 216 VDL---HAAPG 223 (436)
Q Consensus 216 lDl---H~~pg 223 (436)
||+ |...+
T Consensus 260 lD~V~NH~~~~ 270 (657)
T 2wsk_A 260 LDIVLNHSAEL 270 (657)
T ss_dssp EEECCSCCTTC
T ss_pred EEEeecccccc
Confidence 998 55443
|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
Probab=87.89 E-value=6.9 Score=39.73 Aligned_cols=128 Identities=16% Similarity=0.200 Sum_probs=79.2
Q ss_pred HHHHHHHHhCCCCEEEecC----ccccccCCCC-----CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPV----GWWIANDPTP-----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv----~~~~~~~~~~-----~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
++=++.++++|+..|=|-- +|-++-.... ..|+..+.-+.|.++++.|+++||++-+-++... +|
T Consensus 65 ~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y~S~~d------~~ 138 (478)
T 3ues_A 65 DQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHGLKFGVYLSPWD------RT 138 (478)
T ss_dssp HHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEEECSCC------SS
T ss_pred HHHHHHHHHcCCCEEEEeEEecCCccccCCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEEeChHH------hC
Confidence 5557888999999987733 2211111110 0233222358899999999999999999876421 11
Q ss_pred CCCCCCCCCCC--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecC--CCCCCCChhHHHHHHHHHHHHHHhhCCCeEEE
Q 013777 231 SATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINE--PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 305 (436)
Q Consensus 231 sg~~~~~~~w~--~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NE--P~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Vi 305 (436)
. +.|. +.+.+.+..-++.|..+|+....++ +|-.+. |.... ..-.| .+.++.||+..|+.+|.
T Consensus 139 ~------~~y~~~~~y~~~~~~ql~EL~~~Yg~~~~~W-~Dg~~~~~~~~~~-~~~~~----~~~~~~i~~~qP~~vi~ 205 (478)
T 3ues_A 139 E------ESYGKGKAYDDFYVGQLTELLTQYGPIFSVW-LDGANGEGKNGKT-QYYDW----DRYYNVIRSLQPDAVIS 205 (478)
T ss_dssp C------TTTTSSHHHHHHHHHHHHHHHHSSSCCSEEE-ECCCCCCCTTSCC-CCCCH----HHHHHHHHHHCTTSEEE
T ss_pred C------cccCchHHHHHHHHHHHHHHHhcCCcceEEE-eeCCCCCCCccch-hhhhH----HHHHHHHHHHCcCEEEE
Confidence 1 1122 3556667777888899997654454 887663 22110 11122 56889999999998764
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A | Back alignment and structure |
|---|
Probab=87.57 E-value=0.95 Score=50.27 Aligned_cols=59 Identities=22% Similarity=0.295 Sum_probs=40.5
Q ss_pred HHHHHHHhCCCCEEEecCccccccC-----CCC------CCCC------c--cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAND-----PTP------PKPF------V--GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~-----~~~------~~~~------~--~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+.+..|+++|+++|=|+=-+....+ +.. ...| . -+..+.|+++|+.|+++||+||||+-
T Consensus 690 ~kldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VIlDvV 767 (1039)
T 3klk_A 690 QNADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADWV 767 (1039)
T ss_dssp HTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4589999999999999432221100 000 0111 1 15789999999999999999999983
|
| >2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=87.04 E-value=0.88 Score=50.84 Aligned_cols=101 Identities=17% Similarity=0.272 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEc---CCCCCC-----CCCCCCCCCCCCC--CCCC--------hhHHHHHHHHHHHHHH
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDL---HAAPGS-----QNGNEHSATRDGF--QEWG--------DSNVADTVAVIDFLAA 257 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~-----qng~~~sg~~~~~--~~w~--------~~~~~~~~~~~~~lA~ 257 (436)
..+.|.++|+.|.++||+||||+ |..+++ ...+.+....++. ..|. +..++..++.++..++
T Consensus 560 ~~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~vr~~i~d~l~~W~~ 639 (1014)
T 2ya1_A 560 RIAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVD 639 (1014)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEECTTCCSCHHHHHTTSTTTSBCBCTTCCBCEETTEECBCTTSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCEEEEEEeccccccccccccCCCCeeEEeCCCCCcccCCCCCCcCcCCHHHHHHHHHHHHHHHH
Confidence 37899999999999999999997 444321 0011110000111 0111 3445666777778887
Q ss_pred HhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 258 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 258 ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
.|.=+ .+ =+|++.+. +.+ +++++..++++.+|+.++|-+
T Consensus 640 e~gvD-Gf-R~D~~~~~-----~~~----~~~~~~~~~~~~~p~~~ligE 678 (1014)
T 2ya1_A 640 TYKVD-GF-RFDMMGDH-----DAA----SIEEAYKAARALNPNLIMLGE 678 (1014)
T ss_dssp HHCCC-EE-EETTGGGS-----BHH----HHHHHHHHHHHHCTTCEEEEC
T ss_pred hcCce-EE-EEeCCCCC-----CHH----HHHHHHHHHHHhCCCeEEEEe
Confidence 77422 22 24555422 222 445677788888998766544
|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
Probab=87.02 E-value=1.6 Score=43.01 Aligned_cols=76 Identities=13% Similarity=0.215 Sum_probs=53.8
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+.+|+.+++.||+.+=|.... .+ .+. . +.|+.+++.|+++|+++-+|++...+
T Consensus 106 ~~hi~~ak~aGIDgfal~w~~---~~----~~~-d---~~l~~~~~aA~~~g~k~~f~~~~y~~---------------- 158 (382)
T 4acy_A 106 RKHIRMHIKANVGVLSVTWWG---ES----DYG-N---QSVSLLLDEAAKVGAKVCFHIEPFNG---------------- 158 (382)
T ss_dssp HHHHHHHHHHTEEEEEEEECG---GG----GTT-C---HHHHHHHHHHHHHTCEEEEEECCCTT----------------
T ss_pred HHHHHHHHHcCCCEEEEEecC---CC----Cch-H---HHHHHHHHHHHHcCCEEEEEeecCCC----------------
Confidence 788999999999999875532 11 121 1 57889999999999999998864421
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCce
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSL 265 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v 265 (436)
...+...+-|..|.++|+++|+.
T Consensus 159 ---~~~~~~~~dv~~li~~Y~~~paY 181 (382)
T 4acy_A 159 ---RSPQTVRENIQYIVDTYGDHPAF 181 (382)
T ss_dssp ---CCHHHHHHHHHHHHHHHTTSTTB
T ss_pred ---CChHHHHHHHHHHHHHhcCCCce
Confidence 11244566777788888776643
|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=86.48 E-value=0.64 Score=49.67 Aligned_cols=57 Identities=14% Similarity=0.270 Sum_probs=39.9
Q ss_pred HHHHHHHhCCCCEEEecCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+.++.|+++|+++|=|+=-+.. . +.....|+ =+..+.|+++|+.|+++||+||+|+-
T Consensus 21 ~~LdYLk~LGVtaIwLsPi~~~-~-~gs~hGYdv~Dy~~Idp~lGt~edfk~LV~aaH~~GIkVIlDvV 87 (720)
T 1iv8_A 21 DNLWYFXDLGVSHLYLSPVLMA-S-PGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDIV 87 (720)
T ss_dssp HTHHHHHHHTCCEEEECCCEEE-C-TTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHhCCCCEEEECCcccC-C-CCCCCCCCCccCCCcCccCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4578999999999998422211 0 00001110 15789999999999999999999984
|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=83.56 E-value=6.7 Score=39.74 Aligned_cols=129 Identities=15% Similarity=0.171 Sum_probs=77.2
Q ss_pred HHHHHHHHhCCCCEEEecC----ccccccCCCC-----CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPV----GWWIANDPTP-----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv----~~~~~~~~~~-----~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
++=++.++++|+..|=+-- +|-++-.... ..|+..+.-+.|.++++.|+++||++.+-+|... +|
T Consensus 57 ~~w~~~~k~aGaky~v~takHHdGf~lw~S~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~g~Y~s~~d------w~ 130 (469)
T 3eyp_A 57 RQWMQTLKAAGIPAAILTAKHADGFCLWPSKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIYLGPHD------RH 130 (469)
T ss_dssp HHHHHHHHHTTCCEEEEEEECTTCCBSSCCTTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECSSC------HH
T ss_pred HHHHHHHHHcCCCEEEEEEEeCCCccccCCCCCCcccccCcccCCCCCHHHHHHHHHHHcCCeEEEEeChhH------hC
Confidence 5667888999999987633 1211111110 0122222348899999999999999999887521 11
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEE
Q 013777 231 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 305 (436)
Q Consensus 231 sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Vi 305 (436)
.. ..+.+. +.+.+.+..-++.|..+|..-..++ +|-.+.+. .+......| .+.||+..|+.+|+
T Consensus 131 ~~---~~~~y~~~~Y~~~~~~Ql~ELlt~Yg~i~~lW-~Dg~~~~~---~~~~~~~~w----~~~i~~~qP~~vi~ 195 (469)
T 3eyp_A 131 EH---LSPLYTTERYKEYYAHQLGELMSDYGKIWETW-WDGAGADE---LTTPVYRHW----YKIVREKQPDCVIF 195 (469)
T ss_dssp HH---TSTTCCHHHHHHHHHHHHHHHHHSSCCCCEEE-CCCTTCTT---CCHHHHHHH----HHHHHHHCTTCEEE
T ss_pred CC---cCcccCcHHHHHHHHHHHHHHHhcCCcccEEE-eCCCCCCC---ccchhHhHH----HHHHHHHCcCcEEe
Confidence 10 001222 4556666677788888998544444 77766543 122222222 38999999988664
|
| >3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} | Back alignment and structure |
|---|
Probab=83.09 E-value=0.88 Score=48.21 Aligned_cols=57 Identities=14% Similarity=0.214 Sum_probs=40.4
Q ss_pred HHHHHHHhCCCCEEEecCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+.+..|+++|+++|=|+=-+.. . +.....|. -+..+.|+++|+.|+++||+||+|+-
T Consensus 19 ~~LdyL~~LGvt~V~LsPi~e~-~-~~s~~GYd~~Dy~~vdp~lGt~edfk~LV~~aH~~GI~VilDvV 85 (704)
T 3hje_A 19 NRLDYFVELGVTHLYLSPVLKA-R-PGSTHGYDVVDYNTINDELGGEEEYIRLIDEAKSKGLGIIQDIV 85 (704)
T ss_dssp TTHHHHHHHTCSEEEECCCEEE-S-TTCSSSCSEEEEEEECGGGTHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHCCCCEEEECCCccC-C-CCCCCCCCCcCCCCcCccCCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 4578999999999998532221 1 10111111 15689999999999999999999984
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=82.90 E-value=5.7 Score=40.75 Aligned_cols=99 Identities=13% Similarity=0.229 Sum_probs=68.6
Q ss_pred CcccccEEEEecCC---CceEEEcCCCCCCcceEEEEEecCCeEEEEEe-CCceEEeecCC--CCceEEEEecCCCCCce
Q 013777 2 STKFQKYIAAESGG---GTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQG--QGNGLVAVSNTAGYSET 75 (436)
Q Consensus 2 s~~~~~~~~a~~~g---~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~-~~~~~~~~~~g--~~~~~~a~~~~~~~~e~ 75 (436)
++..||.|-..+++ |+.|+.-.-.-+.-..|++...+++.|.|+.. .++.+.+.+++ .|..|+--.-..+..+.
T Consensus 367 n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~nQ~ 446 (526)
T 3vsf_A 367 NKNSGKVLDVLDGSVDNAAQIVQWTDNGSLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKEDGGVLIQYTSNGGYNQH 446 (526)
T ss_dssp ETTTCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCSTTEEEEEECCCCCGGGC
T ss_pred ECCCCceEEecCCCCCCCcEEEEccCCCCcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEecCCCCcccE
Confidence 45568877765542 45565444444577889999999999999987 68888776421 13456666666678899
Q ss_pred EEEEEcCCCCcceEEec-cCCceEEEee
Q 013777 76 FQIVRKDGDSSRVRLSA-SNGMFIQAIS 102 (436)
Q Consensus 76 f~~~~~~~~~~~v~i~~-~nG~~lq~~~ 102 (436)
|.+...+++ .++|+. .+|+-|.+.+
T Consensus 447 W~~~~~g~g--~y~i~~~~sg~cLdv~~ 472 (526)
T 3vsf_A 447 WKFTDIGDG--YYKISSRHCGKLIDVRK 472 (526)
T ss_dssp EEEEEEETT--EEEEEESSSCCEEEEGG
T ss_pred EEEEECCCC--eEEEEECCCCCEEEeCC
Confidence 999987654 466666 3588888754
|
| >1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2 | Back alignment and structure |
|---|
Probab=82.23 E-value=3.6 Score=41.42 Aligned_cols=120 Identities=13% Similarity=0.100 Sum_probs=75.9
Q ss_pred cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC-ccchHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCCC
Q 013777 157 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 233 (436)
Q Consensus 157 ~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~-~~~~l~~ld~~v~~a~~~Gi~-VilDlH-~~pg~qng~~~sg~ 233 (436)
.++++.++.|++.|+|.|=|.+ ..+.+..- ... .....+.+.++++.|++.|+. |-+|+- +.||
T Consensus 150 ~l~~e~l~~L~~~G~~rislGv--QS~~~~~l-~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPg---------- 216 (457)
T 1olt_A 150 EIELDVLDHLRAEGFNRLSMGV--QDFNKEVQ-RLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPK---------- 216 (457)
T ss_dssp SCCTHHHHHHHHTTCCEEEEEE--ECCCHHHH-HHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTT----------
T ss_pred cCCHHHHHHHHHcCCCEEEEee--ccCCHHHH-HHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCC----------
Confidence 4689999999999998766654 22211000 000 012567888999999999998 888873 4554
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC----------CChhHHHHHHHHHHHHHHhhCC
Q 013777 234 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG----------VALDTLKSYYKAGYDAVRKYTS 300 (436)
Q Consensus 234 ~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~----------~~~~~~~~~~~~~~~aIR~~~p 300 (436)
.+.+.+.+.++.+.+ . +-+.|..+.+..+|.... .+.+...+.++.+.+.+++.+-
T Consensus 217 ---------et~e~~~~tl~~~~~-l-~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy 282 (457)
T 1olt_A 217 ---------QTPESFAFTLKRVAE-L-NPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGY 282 (457)
T ss_dssp ---------CCHHHHHHHHHHHHH-H-CCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred ---------CCHHHHHHHHHHHHh-c-CcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCC
Confidence 234555556655554 2 234565677777776421 1334566778888888888664
|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
Probab=81.62 E-value=4.2 Score=40.04 Aligned_cols=76 Identities=21% Similarity=0.258 Sum_probs=53.4
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchH-HHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS-KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l-~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~ 238 (436)
+.+|+.+++.||+.+=+-..+ +. . ..- +.|+.+++.|.++|+++-+|++...+
T Consensus 107 ~~h~~~Ak~aGIDgf~l~w~~-----~~---~---~~d~~~l~~~l~aA~~~~~k~~f~~~~~~~--------------- 160 (380)
T 4ad1_A 107 TKHMDMFVMARTGVLALTWWN-----EQ---D---ETEAKRIGLILDAADKKKIKVCFHLEPYPS--------------- 160 (380)
T ss_dssp HHHHHHHHHHTEEEEEEEECC-----CC---S---HHHHHHHHHHHHHHHHTTCEEEEEECCCTT---------------
T ss_pred HHHHHHHHHcCCCEEEEEecC-----CC---C---cccHHHHHHHHHHHHHcCCeEEEEECCCCC---------------
Confidence 788999999999999875311 11 1 122 57888999999999999999875421
Q ss_pred CCChhHHHHHHHHHHHHHHHhCCCCce
Q 013777 239 EWGDSNVADTVAVIDFLAARYANRPSL 265 (436)
Q Consensus 239 ~w~~~~~~~~~~~~~~lA~ry~~~~~v 265 (436)
...+...+-|..|.++|.++|+.
T Consensus 161 ----~~~~~~~~di~~li~~Y~~~pay 183 (380)
T 4ad1_A 161 ----RNVQNLRENIVKLITRYGNHPAF 183 (380)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTSTTB
T ss_pred ----CChHHHHHHHHHHHHHhcCCCce
Confidence 11244556777787788777653
|
| >2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1 | Back alignment and structure |
|---|
Probab=81.40 E-value=1.5 Score=36.42 Aligned_cols=67 Identities=18% Similarity=0.221 Sum_probs=48.7
Q ss_pred eEEEEEecCCeEEEE--EeCCceEEeecCCC------CceEEEEecCCCCCceEEEEEcCCCCcceEEeccCCceE
Q 013777 31 TFRLWRVNETFYNFR--VNNKQFIGLENQGQ------GNGLVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFI 98 (436)
Q Consensus 31 ~f~~~~~~~~~~~~~--~~~~~~~~~~~~g~------~~~~~a~~~~~~~~e~f~~~~~~~~~~~v~i~~~nG~~l 98 (436)
.|+|...+++.|.|| +.||+-|.... += .+.|-..+...+..+.|++....++.-+.+|++.||..+
T Consensus 20 ~FEi~~~~~G~~rfrLka~NGeiI~sSe-~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~Lka~NgqvI 94 (130)
T 2k8e_A 20 WFELSKSSDNQFRFVLKAGNGETILTSE-LYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAANHQII 94 (130)
T ss_dssp EEEEEECTTCCEEEEEECTTSCEEEECC-CBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEEECTTSCEE
T ss_pred eEEEEEcCCCCEEEEEEeCCCCEEEEcC-CcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEEEeCCCCEE
Confidence 689988888876544 44888876541 10 012444555566678999999988888999999999888
|
| >3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A | Back alignment and structure |
|---|
Probab=81.15 E-value=21 Score=29.42 Aligned_cols=98 Identities=16% Similarity=0.235 Sum_probs=67.8
Q ss_pred CCcccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEe-CCceEEeecCCCCceEEEEecCCCCCce-EEE
Q 013777 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAGYSET-FQI 78 (436)
Q Consensus 1 ~s~~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~a~~~~~~~~e~-f~~ 78 (436)
+++.+|.||---.-| .|-.-|..-+.--.+++..+.-+.+.+|.. .+.|++.+. .+.|.+++.. ...-+ +++
T Consensus 11 ~~~~~g~~L~I~~dG--~V~Gt~~~~~~~s~l~~~~v~~G~V~I~g~~sg~yL~m~~---~G~v~Gs~~~-s~ec~flE~ 84 (132)
T 3q7x_A 11 RSTETGQFLRINPDG--TVDGTRDRSDPGIQFQISPEGNGEVLLRSTETGQFLRINP---DGTVDGTRDR-SDPGIQFQI 84 (132)
T ss_dssp EETTTCCEEEECTTS--BEEEECCTTCGGGCEEEEEEETTEEEEEETTTCCEEEECT---TSBEEEECC--CCGGGCEEE
T ss_pred eeccCcEEEEECCCC--cEEeecCCCCCCcEEEEEecccCEEEEEEEcccEEEEECC---CCCEeeccCC-CCCceeEEE
Confidence 356789999775544 667777776777788999999899999988 899999986 3468887663 33333 444
Q ss_pred EEcCCCCcceEEec-cCCceEEEeeCeEE
Q 013777 79 VRKDGDSSRVRLSA-SNGMFIQAISETRL 106 (436)
Q Consensus 79 ~~~~~~~~~v~i~~-~nG~~lq~~~~~~v 106 (436)
+.-+ ...+.|+. ..|.||-.+....+
T Consensus 85 ~~~~--~g~v~ikg~~sg~YLamnk~G~l 111 (132)
T 3q7x_A 85 SPEG--NGEVLLRSTETGQFLRINPDGTV 111 (132)
T ss_dssp EEEE--TTEEEEEETTTCCEEEECTTSBE
T ss_pred Eeec--CcEEEEEeccCCeEEEECCCCcC
Confidence 4322 24677877 46889976544433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 436 | ||||
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 5e-65 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 4e-61 | |
| d1ceoa_ | 340 | c.1.8.3 (A:) Endoglucanase CelC {Clostridium therm | 7e-33 | |
| d1h1na_ | 305 | c.1.8.3 (A:) Endocellulase EngI {Thermoascus auran | 1e-24 | |
| d1edga_ | 380 | c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellu | 6e-24 | |
| d1vjza_ | 325 | c.1.8.3 (A:) Endoglucanase homologue TM1752 {Therm | 3e-23 | |
| d1ecea_ | 358 | c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellul | 1e-21 | |
| d1ur4a_ | 387 | c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus lichen | 4e-18 | |
| d1g01a_ | 357 | c.1.8.3 (A:) Alkaline cellulase K catalytic domain | 7e-17 | |
| d7a3ha_ | 300 | c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradh | 9e-14 | |
| d2c0ha1 | 350 | c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue | 2e-13 | |
| d1egza_ | 291 | c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysant | 2e-12 | |
| d1dfca3 | 123 | b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens | 2e-12 | |
| d1wkya2 | 297 | c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JA | 9e-12 | |
| d1dfca1 | 133 | b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens | 4e-11 | |
| d1bqca_ | 302 | c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca | 9e-11 | |
| d1qnra_ | 344 | c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T | 2e-10 | |
| d1rh9a1 | 370 | c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper | 4e-10 | |
| d1tvna1 | 293 | c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalter | 4e-10 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 7e-10 | |
| d1hcda_ | 118 | b.42.5.2 (A:) Histidine-rich actin-binding protein | 3e-08 | |
| d1uuqa_ | 410 | c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta | 7e-08 | |
| d1foba_ | 334 | c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergi | 3e-07 | |
| d1hjsa_ | 332 | c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heter | 3e-06 | |
| d1dfca4 | 111 | b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens | 2e-05 | |
| d2vzsa5 | 339 | c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato | 3e-04 |
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 212 bits (539), Expect = 5e-65
Identities = 91/342 (26%), Positives = 148/342 (43%), Gaps = 43/342 (12%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY G D A LQ HW ++ ++DF ++S G N VRIP+G+W
Sbjct: 50 EYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVS 109
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253
G LD A WA +KV VDLH A GSQNG ++S RD ++ DSN+A T+ V++
Sbjct: 110 GLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLN 169
Query: 254 FLAARYAN---RPSLAAIELINEPLAPGVALDT-LKSYYKAGYDAVRKY-TSTAYVIMSN 308
++ +Y+ + IELINEPL P + +D Y Y+ +R S +I+ +
Sbjct: 170 YILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHD 229
Query: 309 RLGPAD-HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN----------- 356
P + + ++ G V ID H+Y +F+++ ++ ++I
Sbjct: 230 AFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESHW 289
Query: 357 ----QRASDLGAVTTSNGPLTFVGEWTCEWNVKDAS--------------------KQDY 392
+ A+ L + F + W D + K++
Sbjct: 290 IVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENT 349
Query: 393 QRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 433
+R+ AQLD + GW W +K E + W + ++ NG
Sbjct: 350 RRYVEAQLDAF-EMRGGWIIWCYKTESSLEWDAQRLMFNGLF 390
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 201 bits (512), Expect = 4e-61
Identities = 100/336 (29%), Positives = 157/336 (46%), Gaps = 38/336 (11%)
Query: 134 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 193
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 45 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 103
Query: 194 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 253
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 104 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 163
Query: 254 FLAARYANRPS---LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 310
+ +Y + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 164 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 223
Query: 311 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGA----- 364
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 224 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 283
Query: 365 -----------------------VTTSNGPLTFVGEWTCEWNVK---DASKQDYQRFANA 398
+ ++G ++ D K D +R+ A
Sbjct: 284 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEA 343
Query: 399 QLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 433
QLD + T GW +W+ K E A WS + + NG
Sbjct: 344 QLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNGLF 378
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Length = 340 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Score = 124 bits (312), Expect = 7e-33
Identities = 51/312 (16%), Positives = 107/312 (34%), Gaps = 49/312 (15%)
Query: 144 DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNA 203
+ ++H+D++IT++D + ++ G + VR+P + I + +D
Sbjct: 15 SQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRC 74
Query: 204 FDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP 263
+W +KY + +++D+H APG + + ++T + V + FLA RY N
Sbjct: 75 LEWCKKYNLGLVLDMHHAPGYRFQDFKTST----LFEDPNQQKRFVDIWRFLAKRYINER 130
Query: 264 SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFAS 323
A EL+N+ + P A+R+ ST ++ + + +
Sbjct: 131 EHIAFELLNQVVEPDS--TRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLADI 188
Query: 324 GLSRVVIDVHYYNLFSNNFNGL-------------------------------------- 345
+V + H+YN F
Sbjct: 189 DDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMEL 248
Query: 346 -NVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYG 404
N++ N + + + L + GE+ + A + ++ + +
Sbjct: 249 NNLKLNKELLRKDLKPAIEFREKKKCKL-YCGEFGV---IAIADLESRIKWHEDYISLLE 304
Query: 405 RATFGWAYWAHK 416
G A W +K
Sbjct: 305 EYDIGGAVWNYK 316
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Score = 101 bits (251), Expect = 1e-24
Identities = 43/282 (15%), Positives = 88/282 (31%), Gaps = 31/282 (10%)
Query: 141 FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVL 200
FG P V + + L S G+N R+P + L
Sbjct: 16 FGSQNLPGVEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADL 74
Query: 201 DNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYA 260
+ + G +VD H + S+ +D +A+++A
Sbjct: 75 IATVNAITQKGAYAVVDPH-------------NYGRYYNSIISSPSDFETFWKTVASQFA 121
Query: 261 NRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM-------SNRLGPA 313
+ P + + NE + + +A D +R +T+ I
Sbjct: 122 SNPLV-IFDTDNEYHDMDQ--TLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTN 178
Query: 314 DHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT 373
+ + S +++ ++H Y + +G + + +R + +NG
Sbjct: 179 VNDNMKSLTDPSDKIIYEMHQYLDS--DGSGTSATCVSSTIGQERITSATQWLRANGKKG 236
Query: 374 FVGEW-TCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWA 414
+GE+ NV + + + DV+ G +WA
Sbjct: 237 IIGEFAGGADNVCETAITGMLDYMAQNTDVW----TGAIWWA 274
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Score = 100 bits (249), Expect = 6e-24
Identities = 45/311 (14%), Positives = 89/311 (28%), Gaps = 46/311 (14%)
Query: 155 DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV 214
T + + G N VRIPV W + ++ + V
Sbjct: 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSG-SDYKISDVWMNRVQEVVNYCIDNKMYV 117
Query: 215 IVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEP 274
I++ H G S+ ++ S+ +V +AAR+AN E +NEP
Sbjct: 118 ILNTHHDVDKVKGYFPSS------QYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEP 171
Query: 275 LAPG---------------VALDTLKSYYKAGYDAVRKY---------TSTAYVIMSNRL 310
G +++ + + + VR YV +
Sbjct: 172 RLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGA 231
Query: 311 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN---------QRASD 361
+ + +++++ VH Y ++ + + N +
Sbjct: 232 TNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMDN 291
Query: 362 LGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA-- 419
+ TS G +GE ++ +Y + AQ G W
Sbjct: 292 IYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYVAQAKARGILCILWDNNNFSGTGEL 351
Query: 420 ----NHWSLKW 426
+ S ++
Sbjct: 352 FGFFDRRSCQF 362
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Score = 97.5 bits (241), Expect = 3e-23
Identities = 47/288 (16%), Positives = 86/288 (29%), Gaps = 28/288 (9%)
Query: 149 VLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAE 208
+EDF +++ N VRIP+ + +D P + +D W E
Sbjct: 12 AFSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGE 71
Query: 209 KYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAI 268
KYG+ + + LH APG E + + + + A + +
Sbjct: 72 KYGIHICISLHRAPGYSVNKEVEEKTNLW-KDETAQEAFIHHWSFIARRYKGISSTHLSF 130
Query: 269 ELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 325
LINEP P ++++ S K +RK +I+ + + +
Sbjct: 131 NLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIII----DGLGYGNIPVDDLTI 186
Query: 326 SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT-----------------TS 368
V Y FS + D+ + +
Sbjct: 187 ENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQ 246
Query: 369 NGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 416
G F GE ++ L+++ G+A W +
Sbjct: 247 KGIEVFCGEMGAYNK---TPHDVVLKWLEDLLEIFKTLNIGFALWNFR 291
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Length = 358 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Score = 93.2 bits (230), Expect = 1e-21
Identities = 48/309 (15%), Positives = 92/309 (29%), Gaps = 38/309 (12%)
Query: 138 TNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS 197
N FG + V+ W + S G N +R+P I T P
Sbjct: 26 INWFGFETCNYVVHGLWSRDY-RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQM 84
Query: 198 ----------KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVAD 247
+V+D +A + G+++I+D H S + A
Sbjct: 85 NQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQ--------SALWYTSSVSEAT 136
Query: 248 TVAVIDFLAARYANRPSLAAIELINEPLAP-----GVALDTLKSYYKAGYDAVRKYTSTA 302
++ + LA RY P++ +L NEP P G + + +AV
Sbjct: 137 WISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNL 196
Query: 303 YVIMSNRLGPADH-----------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI 351
+ + + + +R+V H Y +
Sbjct: 197 LIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFP 256
Query: 352 DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDAS--KQDYQRFANAQLDVYGRATFG 409
+ + + G + N ++GE+ + ++ YG +F
Sbjct: 257 NNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQ-YGADSFQ 315
Query: 410 WAYWAHKCE 418
W +W+ +
Sbjct: 316 WTFWSWNPD 324
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Length = 387 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Score = 83.4 bits (205), Expect = 4e-18
Identities = 42/255 (16%), Positives = 74/255 (29%), Gaps = 13/255 (5%)
Query: 153 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 212
+ +S + FK L G+N VR+ + + + A G+
Sbjct: 34 YNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGM 93
Query: 213 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVA-VIDFLAARYANRPSLAAIELI 271
K++ D H + + + A + + L A A + +++
Sbjct: 94 KLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVG 153
Query: 272 NEP---LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRV 328
NE LA + + AG AVR+ S V + P A L R
Sbjct: 154 NETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFT-NPETSGRYAWIAETLHRH 212
Query: 329 VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDAS 388
+D + + S L +V + G V E + + +D
Sbjct: 213 HVDYDVF--------ASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYTAEDGD 264
Query: 389 KQDYQRFANAQLDVY 403
N Q
Sbjct: 265 GHGNTAPKNGQTLNN 279
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Score = 79.1 bits (194), Expect = 7e-17
Identities = 40/265 (15%), Positives = 89/265 (33%), Gaps = 14/265 (5%)
Query: 154 WDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 212
+ + + F LS++ G N +R+ + T P+ ++ + A ++ +
Sbjct: 48 FGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-----DLVYEGIELAFEHDM 102
Query: 213 KVIVDLH-AAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 271
VIVD H APG + +S D F+E ++ ++ AN PS
Sbjct: 103 YVIVDWHVHAPGDPRADVYSGAYDFFEEI--ADHYKDHPKNHYIIWELANEPSPNNNGGP 160
Query: 272 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 331
+ +K Y + + +R+ ++ + + ++
Sbjct: 161 GLT-NDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWSQRPDLSADNPIDA-ENIMYS 218
Query: 332 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 391
VH+Y + + + +++ + + F EW + +
Sbjct: 219 VHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAV-FATEWG--TSQANGDGGP 275
Query: 392 YQRFANAQLDVYGRATFGWAYWAHK 416
Y A+ L+ + WA W+
Sbjct: 276 YFDEADVWLNFLNKHNISWANWSLT 300
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Score = 69.1 bits (168), Expect = 9e-14
Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 41/274 (14%)
Query: 153 HWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 211
+ ++ E K+L + GIN R + P + + A + A
Sbjct: 36 WYGQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVK-----EKVKEAVEAAIDLD 90
Query: 212 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 271
+ VI+D H + + D ++ Y + P++ E+
Sbjct: 91 IYVIIDWHILSD---------------NDPNIYKEEAKDFFDEMSELYGDYPNV-IYEIA 134
Query: 272 NEPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVI 330
NEP V + +K Y + +R +I+ D V+
Sbjct: 135 NEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMY 194
Query: 331 DVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQ 390
H+Y +G N++ +DY + G FV EW +
Sbjct: 195 AFHFY----AGTHGQNLRDQVDYALD------------QGAAIFVSEWG--TSAATGDGG 236
Query: 391 DYQRFANAQLDVYGRATFGWAYWAHKCEANHWSL 424
+ A +D WA W+ + +
Sbjct: 237 VFLDEAQVWIDFMDERNLSWANWSLTHKDESSAA 270
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Score = 69.0 bits (167), Expect = 2e-13
Identities = 34/329 (10%), Positives = 86/329 (26%), Gaps = 41/329 (12%)
Query: 131 LRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-- 188
L G Q + D Q + + S+G N+VR+ + + P
Sbjct: 18 LSGANQAWVNYARDFGH--NQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDN 75
Query: 189 ---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNV 245
+ A+++ + + L Q+ + S +
Sbjct: 76 NGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLNGLMVDTRKLQSYI 135
Query: 246 ADTVAVIDFLAARYANRPSLAAIELINE---------------------------PLAPG 278
+ +A N +L +++NE
Sbjct: 136 DHALK---PMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHL 192
Query: 279 VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLF 338
+ + + A+++ A V + + AD + ++
Sbjct: 193 YSAQEIGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSG 252
Query: 339 SNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANA 398
+ +F ++ ++ N+ +GE+ E +S+ ++
Sbjct: 253 TLSFYQVHTYDWQNHFGNESPFKHSFSNFRLKKPMVIGEFNQEHGAGMSSESMFEWAYT- 311
Query: 399 QLDVYGRATFGWAYWAHKCEANHWSLKWM 427
Y A + W+ ++ +
Sbjct: 312 --KGYSGA-WTWSRTDVSWNNQLRGMQHL 337
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Score = 65.2 bits (158), Expect = 2e-12
Identities = 41/275 (14%), Positives = 84/275 (30%), Gaps = 46/275 (16%)
Query: 155 DSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 213
+ + T + L + + VR +G + G+ ++ D A +
Sbjct: 36 EKFYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPA---GNKAKVERVVDAAIANDMY 92
Query: 214 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 273
I+ H ++N ++ + +A +Y N+P+ E+ NE
Sbjct: 93 AIIGWH------------------SHSAENNRSEAIRFFQEMARKYGNKPN-VIYEIYNE 133
Query: 274 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 333
PL +T+K Y +A A+R +I+ + E + +H
Sbjct: 134 PLQV-SWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYTLH 192
Query: 334 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD-- 391
+Y +G +++ N + + EW +A
Sbjct: 193 FYA----GTHGESLRNKARQALNNG----------------IALFVTEWGTVNADGNGGV 232
Query: 392 YQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKW 426
Q +A + A WA + S +
Sbjct: 233 NQTETDAWVTFMRDNNISNANWALNDKNEGASTYY 267
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 123 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.5 bits (149), Expect = 2e-12
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 7 KYIAAESGGGTIVVANRTSASGWETFRLWRVNET-FYNFRVNNKQFIGLENQGQGNGLVA 65
+ ++ G + AN+ + ETF+L +T FR + ++ L G G+ +
Sbjct: 12 RNVSTRQGMD--LSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATG---GVQS 66
Query: 66 VSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS 112
+++ S F I +D R+ L ASNG F+ + +L A +
Sbjct: 67 TASSKNASCYFDIEWRDR---RITLRASNGKFVTSKKNGQLAASVET 110
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Score = 63.4 bits (153), Expect = 9e-12
Identities = 39/288 (13%), Positives = 76/288 (26%), Gaps = 51/288 (17%)
Query: 150 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEK 209
W + +++ G N VRI + + + + N AE
Sbjct: 25 HGHAWYKDQATTAIEGIANTGANTVRIVLSD--------GGQWTKDDIQTVRNLISLAED 76
Query: 210 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIE 269
+ ++++H A G + + D + E + + I
Sbjct: 77 NNLVAVLEVHDATGYDSIASLNRAVDYWIEM---------------RSALIGKEDTVIIN 121
Query: 270 LINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFAS 323
+ NE YK +R +++ D+ + A
Sbjct: 122 IANEWFGSWDG-AAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNAD 180
Query: 324 GLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 383
+ +H Y N + V+ NID V N +GE+
Sbjct: 181 PQRNTMFSIHMYEYAGGNAS--QVRTNIDRVLN------------QDLALVIGEFGHRHT 226
Query: 384 VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENG 431
D + + + GW W+ K W + +
Sbjct: 227 NGDVDESTI-------MSYSEQRGVGWLAWSWKGNGPEWEYLDLSNDW 267
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 133 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.4 bits (141), Expect = 4e-11
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Query: 7 KYIAAESGGGTIVVANRTSASGWETFRLWRVNE----TFYNFRVNNKQFIGLENQGQGNG 62
KY+ AE+ G V A+ +S + + L + + R + +++ + G
Sbjct: 15 KYLTAEAFGFK-VNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGN--- 70
Query: 63 LVAVSNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGSSS 114
+ G F IV D S ++ + +E RL+ + S
Sbjct: 71 VTCEREVPGPDCRFLIV-AHDDGRWSLQSEAHRRYFGG-TEDRLSCFAQTVS 120
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Score = 60.3 bits (145), Expect = 9e-11
Identities = 37/290 (12%), Positives = 76/290 (26%), Gaps = 51/290 (17%)
Query: 150 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEK 209
+W T F + S+G N VR+ + + P + N ++
Sbjct: 26 HPHNWYPQHTQ-AFADIKSHGANTVRVVLSNGVRWSKNGPSD--------VANVISLCKQ 76
Query: 210 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIE 269
+ ++++H G + S W L + I
Sbjct: 77 NRLICMLEVHDTTGYGEQSGASTLDQAVDYW------------IELKSVLQGEEDYVLIN 124
Query: 270 LINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS-------F 321
+ NEP + + A +R +++ D +
Sbjct: 125 IGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYA 184
Query: 322 ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE 381
+ V +H Y ++S + +++ N PL +GE+
Sbjct: 185 SDPTGNTVFSIHMYGVYSQAS---TITSYLEHFVNA-----------GLPL-IIGEF--- 226
Query: 382 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENG 431
D + + R G+ W+ M+ N
Sbjct: 227 ----GHDHSDGNPDEDTIMAEAERLKLGYIGWSWSGNGGGVEYLDMVYNF 272
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Score = 60.0 bits (144), Expect = 2e-10
Identities = 51/292 (17%), Positives = 95/292 (32%), Gaps = 43/292 (14%)
Query: 153 HWDSYIT-----DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS---------- 197
+W S++T D F +SS+G+ VR+ + P+P + + S
Sbjct: 27 YWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGA 86
Query: 198 ---KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN----VADTVA 250
+ LD AE++ +K+I+ G G
Sbjct: 87 DGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRK 146
Query: 251 VIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM---- 306
+ + +RYAN ++ A EL NEP G + D + + + V+ S V +
Sbjct: 147 YVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEG 206
Query: 307 -----SNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASD 361
+ P + E FA + +D ++L+ +++ N + N +
Sbjct: 207 LGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGT-----NYTWGNGWIQTH 261
Query: 362 LGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYW 413
A + P E+ + N R G +W
Sbjct: 262 AAACLAAGKPC-VFEEYGAQQNPCTNEAPWQTTSLTT------RGMGGDMFW 306
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Score = 58.6 bits (140), Expect = 4e-10
Identities = 43/299 (14%), Positives = 82/299 (27%), Gaps = 36/299 (12%)
Query: 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--KVLDNAFDWAEK 209
D F+ S +N R + P P V + LD A+K
Sbjct: 34 DPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKK 93
Query: 210 YGVKVIVDLHAAPGSQNG----NEHSATRDGFQEWGDSNVADTVAVIDFLA--------- 256
YG+ +I+ L + G E + R D + + +
Sbjct: 94 YGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRV 153
Query: 257 -----ARYANRPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYTSTAYVI----- 305
Y + P++ + ELINEP P + T +++ ++ S +
Sbjct: 154 NTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEG 213
Query: 306 ----MSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASD 361
+ P + +F S ID +++ N + Q+ D +Q
Sbjct: 214 FYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQV 273
Query: 362 LGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRA------TFGWAYWA 414
+ + E+ + + G +W
Sbjct: 274 HIDDSKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQ 332
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Score = 57.9 bits (139), Expect = 4e-10
Identities = 37/263 (14%), Positives = 74/263 (28%), Gaps = 44/263 (16%)
Query: 155 DSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 213
+ + T E + +R +G + G+ LD + A +
Sbjct: 36 EKFYTAETVAKAKTEFNATLIRAAIGHG-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMY 94
Query: 214 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 273
VI+D H+ ++ A V + +A +Y ++ E+ NE
Sbjct: 95 VIIDFHSHE------------------AHTDQATAVRFFEDVATKYGQYDNV-IYEIYNE 135
Query: 274 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 333
PL ++ +K Y + D +R +++ D + + +H
Sbjct: 136 PLQIS-WVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLH 194
Query: 334 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQ 393
+Y Q +D + EW +A
Sbjct: 195 FYAGTHGQSYRNKAQTALDNGIAL--------------------FATEWGTVNADGNGGV 234
Query: 394 R--FANAQLDVYGRATFGWAYWA 414
+A + + A WA
Sbjct: 235 NINETDAWMAFFKTNNISHANWA 257
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Score = 58.1 bits (139), Expect = 7e-10
Identities = 29/172 (16%), Positives = 50/172 (29%), Gaps = 19/172 (11%)
Query: 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 211
+HW ED + + G++ VRI W +P P + G LD A G
Sbjct: 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGW----LDEAIATLAAEG 64
Query: 212 VKVIVDLHAAPGSQ--------------NGNEHSATRDGFQEWGDSNVAD-TVAVIDFLA 256
+KV++ A + G + + ++ LA
Sbjct: 65 LKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLA 124
Query: 257 ARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308
RY ++A + NE +A + T +
Sbjct: 125 ERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEA 176
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Score = 49.9 bits (119), Expect = 3e-08
Identities = 11/114 (9%), Positives = 37/114 (32%), Gaps = 13/114 (11%)
Query: 7 KYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAV 66
+++AE V + F + + + +++ + + Q +
Sbjct: 12 HFLSAEGEA---VKTHHGHHDHHTHFHVENHGGK-VALKTHCGKYLSIGDHKQ---VYLS 64
Query: 67 SNTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRL--TADYGS-SSWDD 117
+ G F + G +V + + +I A + + +++++
Sbjct: 65 HHLHGDHSLFHLEHHGG---KVSIKGHHHHYISADHHGHVSTKEHHDHDTTFEE 115
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Score = 52.1 bits (123), Expect = 7e-08
Identities = 34/307 (11%), Positives = 83/307 (27%), Gaps = 44/307 (14%)
Query: 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--------KVLDNA 203
+ D ++ L + G+N +R+ + + KP V + LD
Sbjct: 36 EVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYL 95
Query: 204 FDWAEKYGVKVIVDLHAAPGSQNG-NEHSATRDGFQEWGDSNVADTVAVIDFLAARY--- 259
K + V++ + G ++ A +G + + A + A+ Y
Sbjct: 96 LVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSE 155
Query: 260 -------------------------ANRPSLAAIELINEPLAP-----GVALDTLKSYYK 289
+ ++ + +L NEP +
Sbjct: 156 KAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVH 215
Query: 290 AGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ 349
A ++ + V + ++ F + ID Y+++ N++ + +
Sbjct: 216 AAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTK 275
Query: 350 NIDYVNNQRASDLGAVTTSNGPLTFVGE--WTCEWNVKDASKQDYQRFANAQLDVYGRAT 407
+ + + + + E+ + D Y R
Sbjct: 276 PAETWPSAWEKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGV 335
Query: 408 FGWAYWA 414
F +
Sbjct: 336 FELMLAS 342
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Length = 334 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Score = 49.7 bits (118), Expect = 3e-07
Identities = 30/269 (11%), Positives = 72/269 (26%), Gaps = 33/269 (12%)
Query: 159 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218
T L+ GIN++R V W +P+ + G+ + +DL
Sbjct: 29 TQALETILADAGINSIRQRV-W---VNPSDGS----YDLDYNLELAKRVKAAGMSLYLDL 80
Query: 219 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVA-VIDFLAARYANRPSLAAIELINEPLAP 277
H + + ++ + T G+ + + + +A I I +
Sbjct: 81 HLSDTWADPSDQT-TPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRA 139
Query: 278 GVAL--------DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSF-------A 322
G+ + + +G V+ + L + ++
Sbjct: 140 GLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETVLAT 199
Query: 323 SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEW 382
L D + + + + N + ++ V E
Sbjct: 200 GELLSTDFDYFGVSYYPFYSASATLASLKTSLAN--------LQSTYDKPVVVVETNWPV 251
Query: 383 NVKDASKQDYQRFANAQLDVYGRATFGWA 411
+ + + ++ V G+ F
Sbjct: 252 SCPNPAYAFPSDLSSIPFSVAGQQEFLEK 280
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Length = 332 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Score = 46.4 bits (109), Expect = 3e-06
Identities = 29/260 (11%), Positives = 67/260 (25%), Gaps = 22/260 (8%)
Query: 159 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218
L++NG+N VR V +P + A+ G+ V +D
Sbjct: 29 AQPLENILAANGVNTVRQRV----WVNPADGN----YNLDYNIAIAKRAKAAGLGVYIDF 80
Query: 219 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE----- 273
H + + + + + + +D + + NE
Sbjct: 81 HYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGL 140
Query: 274 --PLAPGVALDTLKSYYKAGYDAVRKY-TSTAYVIMSNRLGPADHKELLSFASGL--SRV 328
P + + ++ S IM + D + + +
Sbjct: 141 LWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGT 200
Query: 329 VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDAS 388
+ + + + + + + + S L + + V E + +
Sbjct: 201 LELSDFDMMGVSFYPFYSSSATL----SALKSSLDNMAKTWNKEIAVVETNWPISCPNPR 256
Query: 389 KQDYQRFANAQLDVYGRATF 408
N G+ TF
Sbjct: 257 YSFPSDVKNIPFSPEGQTTF 276
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (98), Expect = 2e-05
Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 14/105 (13%)
Query: 8 YIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVS 67
+I GT + ANR S ++ F+L N+ YN + + ++ + + AV+
Sbjct: 12 FIGCRKVTGT-LDANR---SSYDVFQL-EFNDGAYNIKDSTGKYWTVGSDS------AVT 60
Query: 68 NTAGYSETFQIVRKDGDSSRVRLSASNGMFIQAISETRLTADYGS 112
++ F D G +++ L A +
Sbjct: 61 SSGDTPVDFFFEFCDY---NKVAIKVGGRYLKGDHAGVLKASAET 102
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 40.3 bits (93), Expect = 3e-04
Identities = 27/169 (15%), Positives = 50/169 (29%), Gaps = 27/169 (15%)
Query: 140 GFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKV 199
G+ PD + + + K++ + G+N VR +P
Sbjct: 27 GYTPDLFLRWNETAAA-----DKLKYVLNLGLNTVR----LEGHIEP------------- 64
Query: 200 LDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARY 259
D FD A+ GV + + + W +S+ A + A R
Sbjct: 65 -DEFFDIADDLGVLTMPGWECCDK---WEGQVNGEEKGEPWVESDYPIAKASMFSEAERL 120
Query: 260 ANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308
+ PS+ + + ++ KA D + A S
Sbjct: 121 RDHPSVISFHIGSDFAPDRRIEQGYLDAMKA-ADFLLPVIPAASARPSP 168
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 436 | |||
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 100.0 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 100.0 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 100.0 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 100.0 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 100.0 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 100.0 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 100.0 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 99.93 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 99.93 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 99.91 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 99.88 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 99.87 | |
| d1dfca3 | 123 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.86 | |
| d1dfca1 | 133 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.79 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 99.77 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 99.75 | |
| d1hcda_ | 118 | Histidine-rich actin-binding protein (hisactophili | 99.71 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 99.57 | |
| d1hcda_ | 118 | Histidine-rich actin-binding protein (hisactophili | 99.56 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.54 | |
| d1dfca4 | 111 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.48 | |
| d1dfca1 | 133 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.44 | |
| d1dfca3 | 123 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.41 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 99.37 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 99.31 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 99.3 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 99.26 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 99.23 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 99.2 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 99.19 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.17 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 99.13 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 99.11 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 99.1 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 99.05 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 98.98 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 98.94 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 98.9 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 98.89 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 98.89 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 98.8 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 98.75 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 98.73 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 98.73 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 98.72 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 98.69 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 98.66 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 98.64 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 98.63 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 98.61 | |
| d1dfca4 | 111 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 98.43 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 98.34 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 98.27 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 98.25 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 98.23 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 98.14 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 97.92 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 97.68 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 97.22 | |
| d2v3ga1 | 273 | Endoglucanase H N-terminal domain {Clostridium the | 96.83 | |
| d1ghsa_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 96.56 | |
| d2cyga1 | 312 | Plant beta-glucanases {Banana (Musa acuminata), 1, | 96.55 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 96.5 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 96.42 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 96.25 | |
| d1aq0a_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 96.1 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 96.06 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 96.05 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 96.04 | |
| d1dfca2 | 119 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 96.01 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 95.96 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 95.91 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 95.72 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 95.71 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 95.57 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 95.51 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 95.42 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 95.36 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 95.32 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 95.28 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 95.24 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 95.18 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 95.13 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 95.09 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 95.0 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 94.99 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 94.98 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 94.94 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 94.55 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 94.55 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 94.08 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 93.34 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 92.98 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 92.98 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 92.69 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 92.57 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 92.46 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 92.12 | |
| d1dfca2 | 119 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 91.18 | |
| d1qxma2 | 138 | Hemagglutinin component Ha1 {Clostridium botulinum | 89.33 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 88.54 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 87.45 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 86.99 | |
| d1ji1a3 | 432 | Maltogenic amylase, central domain {Thermoactinomy | 86.79 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 86.54 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 83.7 | |
| d1r7aa2 | 434 | Sucrose phosphorylase {Bifidobacterium adolescenti | 80.68 |
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=9.7e-55 Score=439.56 Aligned_cols=310 Identities=33% Similarity=0.603 Sum_probs=253.2
Q ss_pred CCCccccccccc-----ccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCC
Q 013777 118 SDPSVFKLNIVS-----TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF 192 (436)
Q Consensus 118 ~~ps~F~~~~~~-----~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~ 192 (436)
++|++|...... ...+|+++++.+|.+++.++|+.||++||||+||+.||++|||+|||||+||.+..+ +++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~h~~~~it~~D~~~i~~~G~N~VRiPv~~~~~~~~-~~~~~ 102 (394)
T d2pb1a1 24 MTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYWAFQLL-DNDPY 102 (394)
T ss_dssp TCGGGTGGGCBTTBCTTSCCSHHHHHHHHCHHHHHHHHHHHHHHSSCHHHHHHHHHTTCCEEEEEEEGGGTCCC-TTCCC
T ss_pred cCchhhhhccCCCccccccchHHHHHHHhChHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEEEecHHHhcCC-CCCcc
Confidence 467777654322 356799999999999999999999999999999999999999999999999977543 45678
Q ss_pred ccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCC---ceeEE
Q 013777 193 VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRP---SLAAI 268 (436)
Q Consensus 193 ~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~---~v~g~ 268 (436)
.++.+++||++|++|+++||+||||||.+||+|++.+++|... ...|. +.++++++++|+.||+||+++| .|++|
T Consensus 103 ~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~v~g~ 181 (394)
T d2pb1a1 103 VQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRD-SYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGI 181 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTT-CCCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEE
T ss_pred chhHHHHHHHHHHHHHHCCcEEEEEeeccCCcccCcCCcCccC-ccccccHHHHHHHHHHHHHHHHHHccCCCCCceEEE
Confidence 8889999999999999999999999999999999999988653 34454 7899999999999999999976 69999
Q ss_pred EeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCC-ChhhhhccCCCCCcEEEEEeecCcCCCCCCCCCh
Q 013777 269 ELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPA-DHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNV 347 (436)
Q Consensus 269 eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~-~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~ 347 (436)
||+|||..+..+.+.+++||++++++||+++|+++|++++++.+. .+..++.......|+||++|+|.+|+......+.
T Consensus 182 el~NEP~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~i~~~~~~~~~~~~~~~~~~~~~~vv~d~H~Y~~f~~~~~~~~~ 261 (394)
T d2pb1a1 182 ELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNI 261 (394)
T ss_dssp ESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCCSEEEEEECCSCSSHHHHTCCH
T ss_pred eecccCCcccccHHHHHHHHHHHHHHHHHhCCCCeEEEcCCCcchhhhhhhccCCCCCceEEEeeecccccCCccccCCH
Confidence 999999875567789999999999999999999999999876543 3345555445678999999999998766666777
Q ss_pred hhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCC---------------------------------CC---CcCHHH
Q 013777 348 QQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN---------------------------------VK---DASKQD 391 (436)
Q Consensus 348 ~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~---------------------------------~~---~~~~~~ 391 (436)
.+++..++.... ... ....|+++|||+.... .. ...++.
T Consensus 262 ~~~i~~~~~~~~----~~~-~~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~~~~~d~~~~~~~~~~~ 336 (394)
T d2pb1a1 262 NDHISVACNWGW----DAK-KESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTD 336 (394)
T ss_dssp HHHHHHHHHHHH----HHH-TCSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCCHHHHHH
T ss_pred HHHHHhhhhhhh----hhh-cccCcceeceecccchhhhhhhcccccccccccccCCCccccccccccChhhcCHHHHHH
Confidence 887777765321 111 2334577777764321 00 012456
Q ss_pred HHHHHHHHHHHHccCCCcEEEEceecCC-CCCChHHHHhCCCccc
Q 013777 392 YQRFANAQLDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 435 (436)
Q Consensus 392 ~~~~~~~q~~~~~~~~~Gw~~W~~k~~~-~~Ws~~~~~~~g~~~~ 435 (436)
+++|+++|+++|+ .+.||+||+||+++ +.|||+.++++|+||.
T Consensus 337 ~r~~~~aQ~~~~e-~~~GW~fWt~K~~~~~~W~~~~~~~~G~iP~ 380 (394)
T d2pb1a1 337 TRRYIEAQLDAFE-YTGGWVFWSWKTENAPEWSFQTLTYNGLFPQ 380 (394)
T ss_dssp HHHHHHHHHHHHH-TTTEEEESCSCCSSCGGGCHHHHHHTTCSCS
T ss_pred HHHHHHHHHHHHh-cCCcEEEeccccCCCCCCCHHHHHHCCCcCC
Confidence 8899999999997 57899999999876 8999999999999984
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.1e-54 Score=434.54 Aligned_cols=311 Identities=30% Similarity=0.547 Sum_probs=250.0
Q ss_pred CCCccccccccc------ccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCC
Q 013777 118 SDPSVFKLNIVS------TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKP 191 (436)
Q Consensus 118 ~~ps~F~~~~~~------~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~ 191 (436)
|+|++|...+.. ...+|+++|+.+|.+++.++|+.||++||||+||+.||++|||+|||||+||.+.. .+.++
T Consensus 28 i~p~~f~~~~~~~~~~~~~~~de~~~~~~~G~~~~~~~~~~h~~~~ite~D~~~i~~~G~N~VRiPi~~~~~~~-~~~~~ 106 (408)
T d1h4pa_ 28 ITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQI-LDDDP 106 (408)
T ss_dssp TSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGTCC-CTTCC
T ss_pred cCchhhhhccccccccccccchHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEEeccHHHhcC-CCCCC
Confidence 566777655432 24589999999999999999999999999999999999999999999999997753 33345
Q ss_pred Cc-cchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCC---CceeE
Q 013777 192 FV-GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANR---PSLAA 267 (436)
Q Consensus 192 ~~-~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~---~~v~g 267 (436)
+. +..+++||++|+||+++||+||||||.+||+|++.+|++.......+.+.++++++++|++||+||+++ +.|+|
T Consensus 107 ~~~~~~~~~ld~~v~~a~~~gl~VilDlH~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~r~~~~~~~~~v~g 186 (408)
T d1h4pa_ 107 YVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIG 186 (408)
T ss_dssp CCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSHHHHHHHHHHHHHHHHHTTSHHHHTTEEE
T ss_pred CcChhHHHHHHHHHHHHHHCCCEEEEEeCCCCCCCcCCCCCCcccccccCCchHHHHHHHHHHHHHHHhcccccccceee
Confidence 44 458999999999999999999999999999999999998764433344889999999999999999997 57999
Q ss_pred EEeecCCCCCCCC-hhHHHHHHHHHHHHHHhhC-CCeEEEEeCCCCCCC-hhhhhccCCCCCcEEEEEeecCcCCCCCCC
Q 013777 268 IELINEPLAPGVA-LDTLKSYYKAGYDAVRKYT-STAYVIMSNRLGPAD-HKELLSFASGLSRVVIDVHYYNLFSNNFNG 344 (436)
Q Consensus 268 ~eL~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~-p~~~Viv~~~~~~~~-~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~ 344 (436)
|||+|||..+..+ .+.+..||++++++||+.. ++.+|+++++|.+.. +..++.......++++|+|+|.+|+.....
T Consensus 187 ~el~NEP~~~~~~~~~~~~~~~~~~~~~iR~~~~~~~~iv~~d~~~~~~~w~~~~~~~~~~~~vv~D~H~Y~~f~~~~~~ 266 (408)
T d1h4pa_ 187 IELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLE 266 (408)
T ss_dssp EESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSEEEEEEECSCSSHHHHT
T ss_pred eecccCccccccchHHHHHHHHHHHHHHHHhccccCceEEEecCCCChhhhhhhcccCCCCceeEeeccceeeecCCccc
Confidence 9999999864333 3468889999999999865 556778888876533 355665545678999999999998765556
Q ss_pred CChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC---------------------------------------
Q 013777 345 LNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK--------------------------------------- 385 (436)
Q Consensus 345 ~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~--------------------------------------- 385 (436)
.+.++++..+|..... .. ....|+++|||++....+
T Consensus 267 ~s~~~~i~~~~~~~~~----~~-~~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~~~~~~~~~~g~c~~~~~~~~~ 341 (408)
T d1h4pa_ 267 RSIDEHIKVACEWGTG----VL-NESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYW 341 (408)
T ss_dssp CCHHHHHHHHHHHHHH----HT-TCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGC
T ss_pred CChhhhhhhhhhhhhh----hh-cccCCcccccccccccchhhhcccccccceeecccccCCcCccccccccccCChhhC
Confidence 7888888887754322 22 234569999998642210
Q ss_pred -CcCHHHHHHHHHHHHHHHccCCCcEEEEceecCC-CCCChHHHHhCCCccc
Q 013777 386 -DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 435 (436)
Q Consensus 386 -~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~-~~Ws~~~~~~~g~~~~ 435 (436)
...++.+++|+++|+++|+ .+.||+||+||+++ ++|||+.++++|+||.
T Consensus 342 ~~~~~~~~r~~~eaQ~~~ye-~~~GW~fWt~K~e~~~~W~~~~~~~~g~iP~ 392 (408)
T d1h4pa_ 342 SDERKENTRRYVEAQLDAFE-MRGGWIIWCYKTESSLEWDAQRLMFNGLFPQ 392 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TTTEEEESCSCCSSCSTTCHHHHHHTTSSCS
T ss_pred CHHHHHHHHHHHHHHHHHHh-cCCCEEEeeeeCCCCCCCCHHHHHHCCCcCC
Confidence 0123467899999999998 57899999999987 8999999999999985
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=6.4e-42 Score=338.36 Aligned_cols=255 Identities=20% Similarity=0.356 Sum_probs=192.4
Q ss_pred HHHHhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCC
Q 013777 149 VLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 228 (436)
Q Consensus 149 ~~~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~ 228 (436)
..++||++++||+||+.|+++|||+|||||+|+.+....++..++++.|++||++|++|+++||+||||+|..|+.+.+.
T Consensus 20 ~~~~h~~~~~te~d~~~i~~~G~n~vRlpi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~H~~p~~~~~~ 99 (340)
T d1ceoa_ 20 FSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQD 99 (340)
T ss_dssp CCHHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC-----
T ss_pred cchhhhcccccHHHHHHHHHcCCCEEEeecCHHHhccCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccc
Confidence 45689999999999999999999999999999987665555677888999999999999999999999999999977554
Q ss_pred CCCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 229 EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 229 ~~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
.+. ...|. +...++++++|+.||+||+++|.|++|||+|||..+ +.+.|.+++++++++||+++|+++|+++
T Consensus 100 ~~~-----~~~~~~~~~~~~~~~~~~~la~ry~~~p~v~~~el~NEP~~~--~~~~~~~~~~~~~~aIR~~dp~~~I~v~ 172 (340)
T d1ceoa_ 100 FKT-----STLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIG 172 (340)
T ss_dssp --------CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEE
T ss_pred ccc-----ccccccHHHHHHHHHHHHHHHHhcCCCCcEEEEeeeeecCCC--CHHHHHHHHHHHHHHHHhcCCCcEEEeC
Confidence 332 22344 678899999999999999999999999999999853 5688999999999999999999999998
Q ss_pred CC-CCCCChhhhhcc-CCCCCcEEEEEeecCcCCCCCCCCC---------------------------------------
Q 013777 308 NR-LGPADHKELLSF-ASGLSRVVIDVHYYNLFSNNFNGLN--------------------------------------- 346 (436)
Q Consensus 308 ~~-~~~~~~~~~~~~-~~~~~nvv~~~H~Y~~~~~~~~~~~--------------------------------------- 346 (436)
+. |.+ ...+..+ ...++|+||++|+|.|+. |+++.
T Consensus 173 g~~~~~--~~~~~~~~~~~d~nv~~~~H~Y~p~~--fth~~~~w~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 248 (340)
T d1ceoa_ 173 GNNYNS--PDELKNLADIDDDYIVYNFHFYNPFF--FTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMEL 248 (340)
T ss_dssp CHHHHC--GGGGGGSCCCCCSSEEEEEEECCSHH--HHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGG
T ss_pred CCCcCC--chhhhcCCCCCCCCEEEEEeccCccc--cccccccccccccccccccCCCcccccccccccccccccccccc
Confidence 52 321 2223222 246789999999998752 11000
Q ss_pred --hhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 347 --VQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 347 --~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
.......+..... .+..+.+.++.||+|||||+... ++.+...+|++++++++++.++||+||+||..
T Consensus 249 ~~~~~~~~~~~~~~~-~~~~~~~~~g~Pv~igEFG~~~~---~~~~~~~~~~~~~~~~~~~~~igw~~W~~~~~ 318 (340)
T d1ceoa_ 249 NNLKLNKELLRKDLK-PAIEFREKKKCKLYCGEFGVIAI---ADLESRIKWHEDYISLLEEYDIGGAVWNYKKM 318 (340)
T ss_dssp TTCEESHHHHHHHHH-HHHHHHHHHCCEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred ccccccHHHHHHHHH-HHHHHHHHcCCCEEEEccCCcCC---CCHHHHHHHHHHHHHHHHHcCCcEEEeCCCCC
Confidence 0001123322222 22333444565699999997532 34566678999999999999999999999874
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=2.9e-40 Score=326.76 Aligned_cols=309 Identities=17% Similarity=0.249 Sum_probs=209.1
Q ss_pred CCceEEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCE
Q 013777 94 NGMFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINA 173 (436)
Q Consensus 94 nG~~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~ 173 (436)
.+.||+++|+.+|+++|.. |.+.|+|....| .+....+.+|... .|+||+.||++|||+
T Consensus 2 ~~g~l~~~G~~~~d~~G~~----------~~l~GvN~~g~~----------~~~~~~~~~~~~~-~~~~~~~i~~~G~N~ 60 (358)
T d1ecea_ 2 GGGYWHTSGREILDANNVP----------VRIAGINWFGFE----------TCNYVVHGLWSRD-YRSMLDQIKSLGYNT 60 (358)
T ss_dssp CCSCCEEETTEEECTTSCE----------ECCEEEECCCBT----------TTTCSCTTTTTSC-HHHHHHHHHHTTCCE
T ss_pred CCCeEEeeCCEEECCCCCE----------EEEEEEccCccc----------ccccccccCCccH-HHHHHHHHHHcCCCE
Confidence 4689999999999998873 445555533333 3333333444443 389999999999999
Q ss_pred EEecCccccccCCCCC----------CCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-h
Q 013777 174 VRIPVGWWIANDPTPP----------KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-D 242 (436)
Q Consensus 174 VRipv~~~~~~~~~~~----------~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~-~ 242 (436)
|||||+||.+.+..++ ..+...++++||++|++|+++||+||||||..+++++... .+. +
T Consensus 61 VRlpv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~~~~~---------~~~~~ 131 (358)
T d1ecea_ 61 IRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSAL---------WYTSS 131 (358)
T ss_dssp EEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCSS---------SCCSS
T ss_pred EEecCcHHHccCCCCCCCccccccChhhhchhHHHHHHHHHHHHHHCCCceeeecccccccCCCcc---------ccCCh
Confidence 9999999977543211 1123468999999999999999999999998765432111 111 4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----CChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCC-C----
Q 013777 243 SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG-P---- 312 (436)
Q Consensus 243 ~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~-~---- 312 (436)
...++++++|+.||+||+++|.|++|||+|||..+. .....+.+++++++++||+.+|+++|++++... .
T Consensus 132 ~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~ 211 (358)
T d1ecea_ 132 VSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSY 211 (358)
T ss_dssp SCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEEC
T ss_pred HHHHHHHHHHHHHHHhhcCccceEeeeeccccccCCcCCccchhhhHHHHHHHHHHHHHhhCCCcEEEEeccccCccccc
Confidence 567899999999999999999999999999998642 235678999999999999999999999974110 0
Q ss_pred ---CChhhhh--c-cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCC
Q 013777 313 ---ADHKELL--S-FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD 386 (436)
Q Consensus 313 ---~~~~~~~--~-~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~ 386 (436)
....... . .....+++||++|+|.++..........+....++......+..+...++.||+|||||+....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~igEfG~~~~~-- 289 (358)
T d1ecea_ 212 WWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQS-- 289 (358)
T ss_dssp STTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHTTSSCEEEEECCCCCCS--
T ss_pred cccccccchhhCCccCCccCceEEEeeecCCCcCCccccccchhhhhHHHHHHHHHHHHHHhcCCeEEEecCCCCCCC--
Confidence 0111111 1 1134578999999998754221111111111122222223334444555666999999986642
Q ss_pred cCHH----HHHHHHHHHHHHHccCCCcEEEEceecCC--------CCCChHHHHhCCCccc
Q 013777 387 ASKQ----DYQRFANAQLDVYGRATFGWAYWAHKCEA--------NHWSLKWMIENGYIKL 435 (436)
Q Consensus 387 ~~~~----~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~--------~~Ws~~~~~~~g~~~~ 435 (436)
.+.. .+++|+..+. .+.+.++||+||+||.++ ..|+.....+.|+|+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~-~~~~~~~gw~~W~~k~~~~~~~G~~~~dw~~~~~~~~~~i~~ 349 (358)
T d1ecea_ 290 TTDQTWLKTLVQYLRPTA-QYGADSFQWTFWSWNPDSGDTGGILKDDWQTVDTVKDGYLAP 349 (358)
T ss_dssp HHHHHHHHHHHHHTCCHH-HHTTSSCEEEESCSCSCCTTTCCSBCTTSSSBCHHHHHHHGG
T ss_pred CChHHHHHHHHHHHHHHH-HhcccCceEEEEcCCCCCCCCcceecCCCCCCChhhhhhccc
Confidence 2222 2344444333 445688999999999864 3688888888888765
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=100.00 E-value=1e-38 Score=311.00 Aligned_cols=265 Identities=17% Similarity=0.179 Sum_probs=187.4
Q ss_pred ccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHH
Q 013777 122 VFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLD 201 (436)
Q Consensus 122 ~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld 201 (436)
+|.+.|+|..+.||... .....+..|+ +|+|++||+.|+++|||+|||||+|+.+.+..+...+++..+++||
T Consensus 3 ~~~~~Gvn~~G~e~~~~------~~~g~~~~~~-~~~t~~di~~l~~~G~N~VRlPv~~~~~~~~~~~~~~~~~~~~~l~ 75 (305)
T d1h1na_ 3 VFQWFGSNESGAEFGSQ------NLPGVEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLI 75 (305)
T ss_dssp SSSEEEEEECCTTCSTT------SSSCCBTTTB-CCCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHH
T ss_pred ceeEEEEEccccccCCC------CCCCccCCCc-ccCCHHHHHHHHHCCCCEEEeeeeHHHhccCCCCCccCHHHHHHHH
Confidence 56677887777775322 2222334456 6899999999999999999999999877654444567788999999
Q ss_pred HHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCCh
Q 013777 202 NAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVAL 281 (436)
Q Consensus 202 ~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~ 281 (436)
++|++|.++||+||||+|......+. . ....+++.++|++||+||+++|.| +|||+|||+ ..+.
T Consensus 76 ~~v~~a~~~gl~vIlD~H~~~~~~~~----------~---~~~~~~~~~~W~~ia~~~~~~~~v-~~el~NEP~--~~~~ 139 (305)
T d1h1na_ 76 ATVNAITQKGAYAVVDPHNYGRYYNS----------I---ISSPSDFETFWKTVASQFASNPLV-IFDTDNEYH--DMDQ 139 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTEETTE----------E---CCCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCC--SSCH
T ss_pred HHHHHHHhcCCeEEEecccCCccccc----------c---cccHHHHHHHHHHHHHHhCCCCee-EEEeccCCC--CccH
Confidence 99999999999999999986432110 0 134578899999999999999987 599999998 4567
Q ss_pred hHHHHHHHHHHHHHHhhC-CCeEEEEeC-CCCCC-Ch----hhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHH
Q 013777 282 DTLKSYYKAGYDAVRKYT-STAYVIMSN-RLGPA-DH----KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYV 354 (436)
Q Consensus 282 ~~~~~~~~~~~~aIR~~~-p~~~Viv~~-~~~~~-~~----~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i 354 (436)
+.|..++++++++||+++ ++++|+++. .|... .+ ..+..+....+|+||++|.|.+++.. +...+......
T Consensus 140 ~~w~~~~~~~~~~IR~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~~--g~~~~~~~~~~ 217 (305)
T d1h1na_ 140 TLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTNVNDNMKSLTDPSDKIIYEMHQYLDSDGS--GTSATCVSSTI 217 (305)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGBSTTHHHHSGGGGGCCCTTCCEEEEEEEECSTTSS--SCCSCCSCTTH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECCCcccccccccccCcccccCCCCCCCEEEEEEeCCCCCCC--Cccccccccch
Confidence 899999999999999998 567777774 33221 11 12223335568999999999876532 11111100011
Q ss_pred HHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCC---CcEEEEceec
Q 013777 355 NNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRAT---FGWAYWAHKC 417 (436)
Q Consensus 355 ~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~---~Gw~~W~~k~ 417 (436)
...+......+.+.++.|++|||||... .+....+++.+++.+++++ +||+||+.++
T Consensus 218 ~~~~~~~~~~~~~~~g~p~~igEfG~~~------~~~~~~~~~~~~~~~~~~~~~~~gw~~W~~g~ 277 (305)
T d1h1na_ 218 GQERITSATQWLRANGKKGIIGEFAGGA------DNVCETAITGMLDYMAQNTDVWTGAIWWAAGP 277 (305)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEECCS------SHHHHHHHHHHHHHHHTCTTTEEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCCCC------CCcHHHHHHHHHHHHHHcCCcceEEEEecCCC
Confidence 1122223334455667679999999643 1345567888888888877 7888888765
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.8e-37 Score=302.72 Aligned_cols=257 Identities=20% Similarity=0.294 Sum_probs=193.3
Q ss_pred HHHhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 150 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 150 ~~~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
++.|++++++|+||+.|+++|||+|||||.|+.+.+..++..+.++.|++||++|++|.++||+||||+|..||.+++..
T Consensus 13 ~~~~~~~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~vildlH~~pg~~~~~~ 92 (325)
T d1vjza_ 13 FSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSVNKE 92 (325)
T ss_dssp SSTTCCCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEESCTT
T ss_pred hhhcccCCCCHHHHHHHHHcCCCEEEecccHHHccCCCCCCccCHHHHHHHHHHHHHHHHcCCcEEEeeccccccccCcc
Confidence 45678889999999999999999999999999887655555667789999999999999999999999999999887666
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC---CCChhHHHHHHHHHHHHHHhhCCCeEE
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTAYV 304 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~~V 304 (436)
++. ....|. +..+++++.+|+.||++|++++ .|++|||+|||... ....+.+.+++++++++||+++|+++|
T Consensus 93 ~~~---~~~~~~~~~~~~~~~~~w~~~a~~~~~~~~~i~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~ir~~~p~~~v 169 (325)
T d1vjza_ 93 VEE---KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLI 169 (325)
T ss_dssp SCC---SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred ccc---ccccccchhhHHHHHHHHHHHHHHhcccceeEEeeeccccCCCCccccchhhhhhhHHHHHHHHHhccCCCcEE
Confidence 543 334455 6788899999999999999875 57999999999853 245678999999999999999999999
Q ss_pred EEeCCCCCCChhhhhccCCCCCcEEEEEeecCcCCCC-----------CCCCC--------hhhhHHHHHHhhhhhHHHh
Q 013777 305 IMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNN-----------FNGLN--------VQQNIDYVNNQRASDLGAV 365 (436)
Q Consensus 305 iv~~~~~~~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~-----------~~~~~--------~~~~i~~i~~~~~~~~~~~ 365 (436)
++++.. +...........++++++|.|.++... +.... .......+..... .+...
T Consensus 170 ~v~g~~----~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (325)
T d1vjza_ 170 IIDGLG----YGNIPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYL-TWIKL 244 (325)
T ss_dssp EEECHH----HHTBCCTTCCCSSEEEEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHH-HHHGG
T ss_pred EecCCc----cccccCCcccccceeeeecccccccccccccccccccccccCCCCccccccccccHHHHHHHHH-HHHHH
Confidence 998421 111112224567899999999865310 00000 0011112111111 11222
Q ss_pred hhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 366 TTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 366 ~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
.+. +.||+|||||+.. .++.+...+|++++++++++.++||+||+||..
T Consensus 245 ~~~-g~Pv~~gEfG~~~---~~~~~~~~~~~~~~l~~~~~~g~g~~~W~~~~~ 293 (325)
T d1vjza_ 245 RQK-GIEVFCGEMGAYN---KTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGP 293 (325)
T ss_dssp GGG-TCEEEEEEECCCT---TSCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred Hhc-CCCEEEeeccCcC---CCCcHHHHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 233 4469999999743 345677789999999999999999999999964
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=100.00 E-value=4.7e-36 Score=289.60 Aligned_cols=256 Identities=14% Similarity=0.209 Sum_probs=186.5
Q ss_pred EEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEec
Q 013777 98 IQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 177 (436)
Q Consensus 98 lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRip 177 (436)
|+++|+.||+++|+. |.+.|++. | ..|....+++||+.||++|+|+||||
T Consensus 3 l~v~G~~ivd~nG~~----------~~l~Gvn~-----------~---------~~~~~~~~~~d~~~~~~~G~N~VRl~ 52 (297)
T d1wkya2 3 FYVSGTTLYDANGNP----------FVMRGINH-----------G---------HAWYKDQATTAIEGIANTGANTVRIV 52 (297)
T ss_dssp CEEETTEEECTTSCB----------CCCEEEEE-----------C---------GGGCGGGHHHHHHHHHTTTCSEEEEE
T ss_pred eEEECCEEECCCCCE----------EEEEEecc-----------C---------cccCchHHHHHHHHHHHCCCcEEEEe
Confidence 578999999988873 44556552 1 12444566899999999999999999
Q ss_pred CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHH
Q 013777 178 VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 257 (436)
Q Consensus 178 v~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ 257 (436)
+.+ +..+.++.+++||++|++|.++||+||||+|..++.++ ....+.++++|+.+++
T Consensus 53 ~~~--------~~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~~~~~~---------------~~~~~~~~~~w~~~a~ 109 (297)
T d1wkya2 53 LSD--------GGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDS---------------IASLNRAVDYWIEMRS 109 (297)
T ss_dssp ECC--------SSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCC---------------HHHHHHHHHHHHHTGG
T ss_pred ccC--------CCccCccHHHHHHHHHHHHHHCCCceEeeccccccccc---------------cccHHHHHHHHHHHHH
Confidence 864 24566778999999999999999999999998765321 3677889999999999
Q ss_pred HhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhc------cCCCCCcEEEE
Q 013777 258 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS------FASGLSRVVID 331 (436)
Q Consensus 258 ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~------~~~~~~nvv~~ 331 (436)
||+++|.|++|||+|||.. ....+.+..++++++++||+++|+++|++++.........+.. ...+..+++|+
T Consensus 110 ~~~~~p~v~~~~l~NEp~~-~~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~y~ 188 (297)
T d1wkya2 110 ALIGKEDTVIINIANEWFG-SWDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRNTMFS 188 (297)
T ss_dssp GTTTCTTTEEEECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHHHHHHHHHHHTCTTCCEEEE
T ss_pred HhcCCCCEEEEeccccccc-cchhhhhhhhhhhhHHHHHhcCCCceEEEecCCcccccchhhhccccccCCCcccceeEe
Confidence 9999999999999999985 4556789999999999999999999999985332223222111 13567899999
Q ss_pred EeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEE
Q 013777 332 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWA 411 (436)
Q Consensus 332 ~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~ 411 (436)
+|.|..+.. .... ... .+...... +.|++|||||+......... +++++.++++++||+
T Consensus 189 ~H~Y~~~~~-----~~~~-~~~-------~~~~~~~~-g~Pv~vgEfG~~~~~~~~~~-------~~~~~~~~~~~~gw~ 247 (297)
T d1wkya2 189 IHMYEYAGG-----NASQ-VRT-------NIDRVLNQ-DLALVIGEFGHRHTNGDVDE-------STIMSYSEQRGVGWL 247 (297)
T ss_dssp EEESTTTSS-----SHHH-HHH-------HHHHHHTT-TCCEEEEEECSEETTEECCH-------HHHHHHHHHTTCEEE
T ss_pred eccccCCCC-----Chhh-HHH-------HHHHHhhc-CCCEEEEeecccCCCCcHHH-------HHHHHHHHHcCCeEE
Confidence 999976432 1111 111 11222233 44599999998653222222 234455667899999
Q ss_pred EEceecCCCCCChHHHH
Q 013777 412 YWAHKCEANHWSLKWMI 428 (436)
Q Consensus 412 ~W~~k~~~~~Ws~~~~~ 428 (436)
+|+||...+.|++..+.
T Consensus 248 ~W~~~~~~~~~~~~~~~ 264 (297)
T d1wkya2 248 AWSWKGNGPEWEYLDLS 264 (297)
T ss_dssp ESCSSCCCGGGGGGCSB
T ss_pred EEEEECCCCCccccccc
Confidence 99999876666655433
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=100.00 E-value=5.7e-36 Score=290.40 Aligned_cols=267 Identities=17% Similarity=0.240 Sum_probs=188.1
Q ss_pred eEEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHH-hCCCCEEE
Q 013777 97 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAVR 175 (436)
Q Consensus 97 ~lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia-~~G~N~VR 175 (436)
+|+++|+.||+++|.. |.+.|++.. |. .++..+++++||+.|+ ++|+|+||
T Consensus 8 ~l~v~g~~ivd~nG~~----------v~lrGvn~~----------~~--------~~~~~~~~~~~~~~l~~~~G~N~VR 59 (300)
T d7a3ha_ 8 QLSISNGELVNERGEQ----------VQLKGMSSH----------GL--------QWYGQFVNYESMKWLRDDWGINVFR 59 (300)
T ss_dssp SCEEETTEEECTTSCB----------CCCEEEEES----------CH--------HHHGGGCSHHHHHHHHHHTCCCEEE
T ss_pred eEEEeCCEEECCCCCE----------EEEEEEeCC----------Cc--------ccccccCCHHHHHHHHHHcCCCEEE
Confidence 7899999999988873 445555432 21 2455678899999986 69999999
Q ss_pred ecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Q 013777 176 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFL 255 (436)
Q Consensus 176 ipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~l 255 (436)
+|+..... ....++..+++||++|++|.++||+||||+|..++... ..+.+++.++|+.|
T Consensus 60 ~~~~~~~~-----~~~~~~~~~~~ld~~v~~a~~~Gl~Vild~h~~~~~~~---------------~~~~~~~~~~w~~i 119 (300)
T d7a3ha_ 60 AAMYTSSG-----GYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP---------------NIYKEEAKDFFDEM 119 (300)
T ss_dssp EEEESSTT-----STTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHHHHH
T ss_pred EeeEcCcc-----CcccCHHHHHHHHHHHHHHHHCCCEEEEeeeecCCCCC---------------hhhHHHHHHHHHHH
Confidence 99854311 11234568999999999999999999999998765311 14578899999999
Q ss_pred HHHhCCCCceeEEEeecCCCCCCC-ChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhccCCCCCcEEEEEee
Q 013777 256 AARYANRPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHY 334 (436)
Q Consensus 256 A~ry~~~~~v~g~eL~NEP~~~~~-~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~~~~~~~nvv~~~H~ 334 (436)
|+|||++|.|+ |||+|||..... ..+.|+.++++++++||+++|+++|++++.....+.......+..++|+||++|.
T Consensus 120 a~ryk~~p~V~-~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~niv~~~H~ 198 (300)
T d7a3ha_ 120 SELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYAFHF 198 (300)
T ss_dssp HHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBHHHHHTSCCSCTTEEEEEEE
T ss_pred HHHhCCCCcce-eeeecccCCCCCCchhHHHHHHHHHHHHHHhcCCCCceeecCCCcccccchhhcCCCCCCCEEEEECC
Confidence 99999999986 999999986443 3468999999999999999999999987422112222222233567899999999
Q ss_pred cCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCC-CCcCHHHHHHHHHHHHHHHccCCCcEEEE
Q 013777 335 YNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV-KDASKQDYQRFANAQLDVYGRATFGWAYW 413 (436)
Q Consensus 335 Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~-~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W 413 (436)
|.++.. +...+. +..... .+.|+||||||+.... .... ...++++.++.++++++||++|
T Consensus 199 Y~~~~~-------~~~~~~--------~~~~~~-~~~Pv~~gEfG~~~~~~~~~~---~~~~~~~~~~~~~~~~igw~~W 259 (300)
T d7a3ha_ 199 YAGTHG-------QNLRDQ--------VDYALD-QGAAIFVSEWGTSAATGDGGV---FLDEAQVWIDFMDERNLSWANW 259 (300)
T ss_dssp ETTSCC-------HHHHHH--------HHHHHH-TTCCEEEEEEESSCTTSCSCC---CHHHHHHHHHHHHHTTCCEEEE
T ss_pred ccCcCc-------ccHHHH--------HHHHHh-cCCCEEEeecCCccCCCCCCc---CHHHHHHHHHHHHHcCCeEEEE
Confidence 987431 111111 111222 3456999999986421 1111 1234445566778899999999
Q ss_pred ceecCC-------------CCCChHHHHhCC
Q 013777 414 AHKCEA-------------NHWSLKWMIENG 431 (436)
Q Consensus 414 ~~k~~~-------------~~Ws~~~~~~~g 431 (436)
+|+... +.|+...+.+.|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~w~~~~l~~~G 290 (300)
T d7a3ha_ 260 SLTHKDESSAALMPGANPTGGWTEAELSPSG 290 (300)
T ss_dssp EESCCSSTTCSBCTTCCTTCCCCGGGBCHHH
T ss_pred eCcCCCCCcceeecCCCcCCCCCcccccHHH
Confidence 997432 467766655544
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=3.6e-36 Score=298.73 Aligned_cols=268 Identities=16% Similarity=0.186 Sum_probs=178.4
Q ss_pred CceEEEeeCe-EEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHh-CCCC
Q 013777 95 GMFIQAISET-RLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSS-NGIN 172 (436)
Q Consensus 95 G~~lq~~~~~-~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~-~G~N 172 (436)
-.+|+++|+. +|+++|+. |.+.|++.. |. ..+..++++++++.|++ +|+|
T Consensus 16 ~~~l~~~G~~~l~d~~G~~----------v~lrGv~~~----------~~--------~w~~~~~~~~~~~~l~~~~G~N 67 (357)
T d1g01a_ 16 LQLVELNGQLTLAGEDGTP----------VQLRGMSTH----------GL--------QWFGEIVNENAFVALSNDWGSN 67 (357)
T ss_dssp CEEEEETTEEEEECTTSCB----------CCCEEEEES----------CH--------HHHGGGCSHHHHHHHHTTSCCS
T ss_pred CCeEEEcCeEEEECCCCCE----------EEEEEEecC----------cc--------hhcccccCHHHHHHHHHhcCCC
Confidence 3778888875 66777763 445555422 21 23567889999999985 8999
Q ss_pred EEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Q 013777 173 AVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 252 (436)
Q Consensus 173 ~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~ 252 (436)
+||||+.+.. .+..+.+..+++||++|++|.++|||||||+|..++... . ....++++++|
T Consensus 68 ~VRlp~~~~~-----~~~~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~----~----------~~~~~~~~~~W 128 (357)
T d1g01a_ 68 MIRLAMYIGE-----NGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDP----R----------ADVYSGAYDFF 128 (357)
T ss_dssp EEEEEEESSS-----SSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCT----T----------SGGGTTHHHHH
T ss_pred EEEEeeeecC-----CCCccCHHHHHHHHHHHHHHHHCCCEEEEeecccCCCCC----C----------hhhhhhhHHHH
Confidence 9999996531 122345678999999999999999999999998765321 0 13445678999
Q ss_pred HHHHHHhCCCCc--eeEEEeecCCCCCCC----------ChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhhhc
Q 013777 253 DFLAARYANRPS--LAAIELINEPLAPGV----------ALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS 320 (436)
Q Consensus 253 ~~lA~ry~~~~~--v~g~eL~NEP~~~~~----------~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~~~ 320 (436)
+.||+||+++|+ +++|||+|||+.... ....|+.++++++++||+.+++++|+.+..|. ........
T Consensus 129 ~~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~iiv~~~~w~-~~~~~~~~ 207 (357)
T d1g01a_ 129 EEIADHYKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWS-QRPDLSAD 207 (357)
T ss_dssp HHHHHHHTTCTTGGGEEEECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHH-TCHHHHHH
T ss_pred HHHHHHHhcCcchHHHHHHHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhcCCceEEEecCCcc-ccchhccc
Confidence 999999999884 678999999986421 13578999999999999998776554443343 23233333
Q ss_pred cCCCCCcEEEEEeecCcCCCCCCC---CC-hhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHH
Q 013777 321 FASGLSRVVIDVHYYNLFSNNFNG---LN-VQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFA 396 (436)
Q Consensus 321 ~~~~~~nvv~~~H~Y~~~~~~~~~---~~-~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~ 396 (436)
....++|+||++|+|.++...... .. .....+. ....+...... +.|+||||||+....... .....+.
T Consensus 208 ~~~~~~nvvys~H~Y~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-g~Pv~vgEfG~~~~~~~~--~~~~~~~ 280 (357)
T d1g01a_ 208 NPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSN----VMANVRYALDN-GVAVFATEWGTSQANGDG--GPYFDEA 280 (357)
T ss_dssp SCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGGGCCC----HHHHHHHHHHT-TCCEEEEEEESSBTTTBS--CCCHHHH
T ss_pred ccCCCCCEEEEEEEecCccCCccCCCCcccchHHHHH----HHHHHHHHHHc-CCCEEEEecCCcCCCCCC--CcCHHHH
Confidence 334678999999999875432110 00 0110011 11122223333 445999999975431111 1112344
Q ss_pred HHHHHHHccCCCcEEEEceec
Q 013777 397 NAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 397 ~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
+..++.++++++||++|+|+.
T Consensus 281 ~~~~~~~~~~~isw~~W~~~~ 301 (357)
T d1g01a_ 281 DVWLNFLNKHNISWANWSLTN 301 (357)
T ss_dssp HHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHHHHHcCCceEEEeCcC
Confidence 455677888999999999986
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=2.3e-35 Score=285.28 Aligned_cols=223 Identities=17% Similarity=0.212 Sum_probs=163.6
Q ss_pred hcCCHHHHHHHH-hCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATR 234 (436)
Q Consensus 156 ~~ite~d~~~ia-~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~ 234 (436)
.++++++++.|+ ++|+|+||||++++.. .+..++...+..+++||++|++|+++|||||||+|....
T Consensus 37 ~~~~~~~~~~l~~~~g~N~VR~~~~~~~~-~~~~~~~~~~~~l~~ld~~v~~a~~~gi~vild~h~~~~----------- 104 (293)
T d1tvna1 37 KFYTAETVAKAKTEFNATLIRAAIGHGTS-TGGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEA----------- 104 (293)
T ss_dssp GGCSHHHHHHHHHHHCCSEEEEEEECCTT-STTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG-----------
T ss_pred cccCHHHHHHHHHhCCCcEEEEecccccc-cccccccCcHHHHHHHHHHHHHHHHcCCEEEecCccCCC-----------
Confidence 457899999997 5899999999987644 333344556678999999999999999999999997532
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCC
Q 013777 235 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPAD 314 (436)
Q Consensus 235 ~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~ 314 (436)
..+.+++.++|+.||+|||++|.|+ |||+|||+.. .....|++++++++++||+++|+++|++++.....+
T Consensus 105 -------~~~~~~~~~~w~~~a~r~k~~~~V~-~el~NEP~~~-~~~~~~~~~~~~~~~~Ir~~dp~~~I~v~g~~~~~~ 175 (293)
T d1tvna1 105 -------HTDQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQI-SWVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQD 175 (293)
T ss_dssp -------GGCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSC-CTTTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTC
T ss_pred -------cccHHHHHHHHHHHHHHhCCCCeEE-EEEecccCCC-CcHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccccc
Confidence 1457889999999999999999997 9999999863 345789999999999999999999999985221223
Q ss_pred hhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCC-CCcCHHHHH
Q 013777 315 HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV-KDASKQDYQ 393 (436)
Q Consensus 315 ~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~-~~~~~~~~~ 393 (436)
.......+..+.|+||++|+|.++.. +...+. +..... .+.|++|||||+.... .... ..
T Consensus 176 ~~~~~~~~~~~~~~v~s~H~Y~~~~~-------~~~~~~--------~~~~~~-~g~Pv~vgEfG~~~~~~~~~~---~~ 236 (293)
T d1tvna1 176 VDVASQNPIDRANIAYTLHFYAGTHG-------QSYRNK--------AQTALD-NGIALFATEWGTVNADGNGGV---NI 236 (293)
T ss_dssp HHHHHHSCCCSSSEEEEEEEETTTCC-------HHHHHH--------HHHHHH-TTCCEEEEEEESSCTTSCSCC---CH
T ss_pred cchhhcCCccCCCceEEEEeeccccc-------hHHHHH--------HHHHHh-cCCCeEeeccCCcccCCCCCC---CH
Confidence 33333344567899999999987531 111111 112222 3556999999975321 1111 12
Q ss_pred HHHHHHHHHHccCCCcEEEEceecC
Q 013777 394 RFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 394 ~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
.++++.++.+++.++||++|+|+..
T Consensus 237 ~~~~~~~~~~~~~~igw~~W~~~d~ 261 (293)
T d1tvna1 237 NETDAWMAFFKTNNISHANWALNDK 261 (293)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCS
T ss_pred HHHHHHHHHHHHhCCeEEEEEeecC
Confidence 3344445667778899999999854
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=1.6e-34 Score=289.36 Aligned_cols=254 Identities=17% Similarity=0.218 Sum_probs=178.9
Q ss_pred HHhhhh-cCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 151 QDHWDS-YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 151 ~~h~~~-~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+.-|.+ .+|+++|+.||++|||+|||||.|+.+.++. +..+++..|++||++|++|.++|||||||+|+.++.+++..
T Consensus 54 e~~Wgnp~~t~~~i~~ik~~Gfn~vRiPv~w~~~~~~~-~~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~ 132 (380)
T d1edga_ 54 ETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGS-DYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYF 132 (380)
T ss_dssp HHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEETT-TTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBC
T ss_pred CCccCCccccHHHHHHHHHcCCCEEEEcccHHHhcCCC-CCccCHHHHHHHHHHHHHHHHcCCEEEEecccCCCCCcccC
Confidence 456764 4899999999999999999999998766543 23456779999999999999999999999999988766543
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC---------------hhHHHHHHHHHHH
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA---------------LDTLKSYYKAGYD 293 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~---------------~~~~~~~~~~~~~ 293 (436)
.++ |. +...+++.++|++||+||+++|.+++|||+|||+..... ...+.++++.+++
T Consensus 133 ~~~-------~~~~~~~~~~~~~W~qiA~~fkd~~~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 205 (380)
T d1edga_ 133 PSS-------QYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVN 205 (380)
T ss_dssp SSG-------GGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred Ccc-------cCcHHHHHHHHHHHHHHHHhhcCCCceEEEeecccccccCCccccccccccccHHHHHHHHHHHHHHHHH
Confidence 322 33 567889999999999999999999999999999853211 1357899999999
Q ss_pred HHHhhC---CCeEEEEeCCCCCCCh--hhhhc----cCCCCCcEEEEEeecCcCCCC----------CCCCChhhhHHHH
Q 013777 294 AVRKYT---STAYVIMSNRLGPADH--KELLS----FASGLSRVVIDVHYYNLFSNN----------FNGLNVQQNIDYV 354 (436)
Q Consensus 294 aIR~~~---p~~~Viv~~~~~~~~~--~~~~~----~~~~~~nvv~~~H~Y~~~~~~----------~~~~~~~~~i~~i 354 (436)
+||+++ ++++|++++...+.+. ...+. ....++++++++|+|.||... ............+
T Consensus 206 ~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~d~~~~~~~li~s~H~Y~p~~f~~~~~~~~~~~~~~~~~~~~~~~i 285 (380)
T d1edga_ 206 TVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEV 285 (380)
T ss_dssp HHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTCHHHHHHH
T ss_pred HHHHhccCCCceEEEeCCCccCCccccchhhcccccccCCCCCEEEEEeecCccccccccCCcCCCCccccCccccHHHH
Confidence 999986 5567888753222111 11111 123467999999999886310 0011111111222
Q ss_pred HHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEcee
Q 013777 355 NNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 416 (436)
Q Consensus 355 ~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k 416 (436)
...+. .+......++.||+|||||+... ...+...+|++.+++..++.+++|+||...
T Consensus 286 ~~~~~-~~~~~~~~~giPviiGEfG~~~~---~~~~~r~~~~~~~~~~a~~~gi~~~~Wdn~ 343 (380)
T d1edga_ 286 TWFMD-NIYNKYTSRGIPVIIGECGAVDK---NNLKTRVEYMSYYVAQAKARGILCILWDNN 343 (380)
T ss_dssp HHHHH-HHHHHTGGGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHH-HHHHHHHhcCceEEEecccCcCC---CChHHHHHHHHHHHHHHHHcCCcEEEECCC
Confidence 22222 22222234455699999998653 234455677788888888889999999754
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=100.00 E-value=3.9e-34 Score=276.40 Aligned_cols=226 Identities=19% Similarity=0.220 Sum_probs=163.7
Q ss_pred hcCCHHHHHHHH-hCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCC
Q 013777 156 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATR 234 (436)
Q Consensus 156 ~~ite~d~~~ia-~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~ 234 (436)
.++++++++.|+ ++|+|+||+|+.+..... .....+..+++||++|++|.++|||||||+|..++
T Consensus 37 ~~~~~~~~~~l~~~~G~N~vR~~~~~~~~~~---~~~~~~~~~~~ld~vv~~a~~~Giyvild~h~~~~----------- 102 (291)
T d1egza_ 37 KFYTADTVASLKKDWKSSIVRAAMGVQESGG---YLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA----------- 102 (291)
T ss_dssp GGCSHHHHHHHHHTTCCCEEEEEEECSSTTS---TTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG-----------
T ss_pred cccCHHHHHHHHHhcCCCEEEEeccccccCC---cccCcHHHHHHHHHHHHHHHHCCCeEeeeeccCCC-----------
Confidence 467899999998 589999999997542111 11122458999999999999999999999998643
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCC
Q 013777 235 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPAD 314 (436)
Q Consensus 235 ~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~ 314 (436)
....+++.++|+.||+|||++|.|+ |||+|||.. ....+.++.++++++++||+++|+++|++++.....+
T Consensus 103 -------~~~~~~~~~~w~~la~ryk~~p~v~-~el~NEP~~-~~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~ 173 (291)
T d1egza_ 103 -------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQ-VSWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQN 173 (291)
T ss_dssp -------GGGHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCS-CCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTC
T ss_pred -------cccHHHHHHHHHHHHHHhCCCccee-eeeccCcCC-CcchhhHHHHHHHHHHHHHhcCCCcEEEEecCCcccc
Confidence 2567889999999999999999986 999999985 3356789999999999999999999999874321223
Q ss_pred hhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCC-CCcCHHHHH
Q 013777 315 HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV-KDASKQDYQ 393 (436)
Q Consensus 315 ~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~-~~~~~~~~~ 393 (436)
.......+...+|+||++|+|.++.. +...+. +.... ..+.|+||||||..... .... ..
T Consensus 174 ~~~~~~~~~~~~n~vys~H~Y~~~~~-------~~~~~~--------~~~~~-~~~~Pv~vgEfG~~~~~~~~~~---~~ 234 (291)
T d1egza_ 174 VDEASRDPINAKNIAYTLHFYAGTHG-------ESLRNK--------ARQAL-NNGIALFVTEWGTVNADGNGGV---NQ 234 (291)
T ss_dssp HHHHHTSCCCSSSEEEEEEEETTTCC-------HHHHHH--------HHHHH-HTTCCEEEEEEESSCTTSCSCC---CH
T ss_pred cchhhhcccCCCcEEEEecccCCCCc-------hhHHHH--------HHHHH-HcCCCeEecccCCcccCCCCCc---CH
Confidence 33333333567899999999987532 111111 11112 23556999999975321 1111 13
Q ss_pred HHHHHHHHHHccCCCcEEEEceecCCCCCC
Q 013777 394 RFANAQLDVYGRATFGWAYWAHKCEANHWS 423 (436)
Q Consensus 394 ~~~~~q~~~~~~~~~Gw~~W~~k~~~~~Ws 423 (436)
.+++..++.++++++||++|+|+..+..|+
T Consensus 235 ~~~~~~~~~~~~~~i~w~~W~~~~~~~~~~ 264 (291)
T d1egza_ 235 TETDAWVTFMRDNNISNANWALNDKNEGAS 264 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSSTTC
T ss_pred HHHHHHHHHHHHcCCeEEEEeeeCCCCCee
Confidence 345566778888999999999997555555
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=100.00 E-value=8.3e-34 Score=274.53 Aligned_cols=259 Identities=14% Similarity=0.188 Sum_probs=182.0
Q ss_pred EEEeeCeEEEcCCCCCCCCCCCCcccccccccccccchhhhhccCcChhhHHHHHhhhhcCCHHHHHHHHhCCCCEEEec
Q 013777 98 IQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 177 (436)
Q Consensus 98 lq~~~~~~v~a~~~~~~W~~~~ps~F~~~~~~~~~~e~~~~~~~G~~~a~~~~~~h~~~~ite~d~~~ia~~G~N~VRip 177 (436)
|+++|+.||+++|+. |.+.|++.....+ . -.+++|+.||++|+|+||||
T Consensus 4 l~v~g~~i~d~nG~~----------~~lrGvn~~~~~~--------------------~-~~~~~~~~i~~~G~N~VRl~ 52 (302)
T d1bqca_ 4 LHVKNGRLYEANGQE----------FIIRGVSHPHNWY--------------------P-QHTQAFADIKSHGANTVRVV 52 (302)
T ss_dssp SEEETTEEECTTSCB----------CCCEEEEECTTTC--------------------T-TCTTHHHHHHHTTCSEEEEE
T ss_pred EEEeCCEEECCCCCE----------EEEEEeecCcccc--------------------c-chHHHHHHHHhcCCCEEEEe
Confidence 568899999888873 4455655211111 0 02578999999999999999
Q ss_pred CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHH
Q 013777 178 VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 257 (436)
Q Consensus 178 v~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ 257 (436)
+.+. ..+....++.+|++|++|.++||+||||+|..++.+.+.. +...+++.++|+.||+
T Consensus 53 ~~~~--------~~~~~~~~~~~~~~v~~a~~~Gi~vildlh~~~~~~~~~~------------~~~~~~~~~~w~~ia~ 112 (302)
T d1bqca_ 53 LSNG--------VRWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSG------------ASTLDQAVDYWIELKS 112 (302)
T ss_dssp ECCS--------SSSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTSTT------------CCCHHHHHHHHHHTHH
T ss_pred cccc--------cccCcchHHHHHHHHHHHHHCCCEEEEEecccccccCCCc------------hHHHHHHHHHHHHHHH
Confidence 9653 2445568899999999999999999999998876543221 2457889999999999
Q ss_pred HhCCCCceeEEEeecCCCCCC-CChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhh-------hccCCCCCcEE
Q 013777 258 RYANRPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKEL-------LSFASGLSRVV 329 (436)
Q Consensus 258 ry~~~~~v~g~eL~NEP~~~~-~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~-------~~~~~~~~nvv 329 (436)
||+++|.|++|||+|||.... .....+..++++++++||+.+|+++|+++......++... ........|++
T Consensus 113 ~~~~~p~vv~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~d~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 192 (302)
T d1bqca_ 113 VLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNTV 192 (302)
T ss_dssp HHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCHHHHHHHHHHHTCTTCCEE
T ss_pred HhcCCCCEEEEeccccccCCCCcchhhhHHHHHHHHHHHHHcCCCcEEEEcCccccccchhhhccchhccccCCcccceE
Confidence 999999999999999997532 2245789999999999999999999999854333332211 11235678999
Q ss_pred EEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCc
Q 013777 330 IDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFG 409 (436)
Q Consensus 330 ~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~G 409 (436)
|++|.|.++.. .+.+ .. .+...... +.|++|||||+........ .+++++.++++++|
T Consensus 193 y~~H~Y~~~~~-------~~~~---~~----~~~~~~~~-~~Pv~vgEfG~~~~~~~~~-------~~~~~~~~~~~~~g 250 (302)
T d1bqca_ 193 FSIHMYGVYSQ-------ASTI---TS----YLEHFVNA-GLPLIIGEFGHDHSDGNPD-------EDTIMAEAERLKLG 250 (302)
T ss_dssp EEEEESGGGCS-------HHHH---HH----HHHHHHHH-TCCEEEEEECCTTSTTCCC-------HHHHHHHHHHHTCE
T ss_pred EEeeecCCCCC-------HHHH---HH----HHHHhhhc-CCcEEEEecCCcCCCCcHH-------HHHHHHHHHHcCCe
Confidence 99999988642 1111 11 11222233 4459999999764322222 23334444557899
Q ss_pred EEEEceecCCCCCChHHHHh
Q 013777 410 WAYWAHKCEANHWSLKWMIE 429 (436)
Q Consensus 410 w~~W~~k~~~~~Ws~~~~~~ 429 (436)
|++|+|+.....|++..+..
T Consensus 251 ~~~W~~~~~~~~~~~~~~~~ 270 (302)
T d1bqca_ 251 YIGWSWSGNGGGVEYLDMVY 270 (302)
T ss_dssp EEESCSSCCCTTTGGGCSBG
T ss_pred EEEEEecCCCCCcchhhccC
Confidence 99999998776666654433
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=99.93 E-value=1.1e-25 Score=219.58 Aligned_cols=244 Identities=18% Similarity=0.195 Sum_probs=156.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCC-------------CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTP-------------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN 226 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~-------------~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qn 226 (436)
+++|+.|+++|+|+|||++......++.+ ...+.+..++.||+++++|+++||+||||||..++...
T Consensus 39 ~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~~~~~~~ 118 (344)
T d1qnra_ 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYG 118 (344)
T ss_dssp HHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTS
T ss_pred HHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcccccCccccCHHHHHHHHHHHHHHHHcCCeeEeeccCCccccc
Confidence 79999999999999999875433322211 11244568999999999999999999999998766432
Q ss_pred CCC--CCCC-CCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCe
Q 013777 227 GNE--HSAT-RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTA 302 (436)
Q Consensus 227 g~~--~sg~-~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 302 (436)
+.. ..+. ......|. +..++.+.++|+.+++||+++|+|++|+|.|||.....+...+..++++++++||+.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~d~~~ 198 (344)
T d1qnra_ 119 GINAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNH 198 (344)
T ss_dssp HHHHHHHHHCSCTTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCSSS
T ss_pred cccccccccccccccccCCHHHHHHHHHHHHHHHHHhCCCCceeeeccCCccCCCCCchhhhhHHHHHHHHHHHhhCCCC
Confidence 110 0000 00111222 5678889999999999999999999999999998766777889999999999999999999
Q ss_pred EEEEeCC-CCCCCh-----------hhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCC
Q 013777 303 YVIMSNR-LGPADH-----------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG 370 (436)
Q Consensus 303 ~Viv~~~-~~~~~~-----------~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 370 (436)
+|+++.. +..... ..+..........++++|.|..... .........+.. .....+..+
T Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~~~~H~Y~~~~~----~~~~~~~~~~~~-----~~~~~~~~~ 269 (344)
T d1qnra_ 199 LVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWG----TNYTWGNGWIQT-----HAAACLAAG 269 (344)
T ss_dssp EEECCCCCCCCTTSCCCGGGSSSSSCCHHHHHTCTTCCSEEEEECHHHHT----CCSTHHHHHHHH-----HHHHHHHTT
T ss_pred EEEEccccccccccccccccccccccchhhcccCCCceEEEEeecCcccc----cchhHHHHHHHH-----HHHHHhhcC
Confidence 9988632 211100 0011111123345899999953110 111111111111 111223345
Q ss_pred CeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 371 PLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 371 p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
+|++|||||+.... ......+... .......+||++|+|...
T Consensus 270 kPv~v~EfG~~~~~----~~~~~~~~~~--~~~~~~~~G~~~W~~~~~ 311 (344)
T d1qnra_ 270 KPCVFEEYGAQQNP----CTNEAPWQTT--SLTTRGMGGDMFWQWGDT 311 (344)
T ss_dssp SCEEEEEECCSSCH----HHHHHHHHHH--HHTSTTEEEEEESCEECB
T ss_pred CCEEEEecCcCCCC----CccHHHHHHH--HHhccCcceEEEEEcCcc
Confidence 56999999975421 1122222222 122346779999999764
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=99.93 E-value=1.8e-25 Score=219.15 Aligned_cols=257 Identities=14% Similarity=0.120 Sum_probs=159.4
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCC--CCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC-------C
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPT--PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE-------H 230 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~--~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~-------~ 230 (436)
+++|+.||++|+|+|||++..+....+. .++.+++..|+.||++|++|+++||+||+|+|...+...+.. .
T Consensus 42 ~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~ 121 (370)
T d1rh9a1 42 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQ 121 (370)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEECCccCccCcccCCCCCcccHHHHHHHHHHHHHHHHcCCEEEEecccccccccCCccccccccc
Confidence 7889999999999999987544322222 224566779999999999999999999999997654321100 0
Q ss_pred CC--CCCCCCCCC-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCC-CCChhHHHHHHHHHHHHHHhh
Q 013777 231 SA--TRDGFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKY 298 (436)
Q Consensus 231 sg--~~~~~~~w~-~~~~~~~~~~~~~lA~r--------y~~~~~v~g~eL~NEP~~~-~~~~~~~~~~~~~~~~aIR~~ 298 (436)
.+ .......|. +...+.+.+.++.+++| |+++|.|++++++|||... ..+.+.+++++++++++||+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~ 201 (370)
T d1rh9a1 122 RGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSI 201 (370)
T ss_dssp TTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccCCHHHHHHHHHHHHHHHHhhhhhhHhhhcCCceeeeeccccccccCCccchHHHHHHHHHHHHHHHhh
Confidence 00 000111233 56678889999999987 5899999999999999753 345678999999999999999
Q ss_pred CCCeEEEEeCC-CCCCChhhhhc-----------cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhh
Q 013777 299 TSTAYVIMSNR-LGPADHKELLS-----------FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 366 (436)
Q Consensus 299 ~p~~~Viv~~~-~~~~~~~~~~~-----------~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 366 (436)
+|+++|+++.. +.......... ........++++|.|..... ........... ............
T Consensus 202 dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~h~Y~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~ 278 (370)
T d1rh9a1 202 DSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWL--PGLTQEAQDKW-ASQWIQVHIDDS 278 (370)
T ss_dssp CCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTSTTCCCEEEECCHHHHS--TTSCHHHHHHH-HHHHHHHHHHHH
T ss_pred CCCCeEEEeccccccccccccCCCcccccccccccccCCcceEEEeccccCccc--cCCcchhhhhH-HHHHHHHHHHHH
Confidence 99999988632 11111000000 00112335789999953211 11122211111 111112222223
Q ss_pred hcCCCeEEeecccccCCCCCcCHHHHHHH----HHHHHHHHcc--CCCcEEEEceecCC
Q 013777 367 TSNGPLTFVGEWTCEWNVKDASKQDYQRF----ANAQLDVYGR--ATFGWAYWAHKCEA 419 (436)
Q Consensus 367 ~~~~p~v~vGEwg~~~~~~~~~~~~~~~~----~~~q~~~~~~--~~~Gw~~W~~k~~~ 419 (436)
+..+.|++|||||......+.+......+ +....+.... ...||+||+|+++.
T Consensus 279 ~~~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 337 (370)
T d1rh9a1 279 KMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQG 337 (370)
T ss_dssp HHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCTT
T ss_pred HhCCCeEEEeeccCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEeeecCCC
Confidence 33355699999998765444444333333 3222222222 34699999999875
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=99.91 E-value=9.2e-25 Score=211.14 Aligned_cols=236 Identities=13% Similarity=0.084 Sum_probs=152.4
Q ss_pred CHHHHHHHHhCCCCEEEecCccccccCCC-----CCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCC
Q 013777 159 TDEDFKFLSSNGINAVRIPVGWWIANDPT-----PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 233 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRipv~~~~~~~~~-----~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~ 233 (436)
+++||+.||++|+|+||||+.++....+. .+..+....++.+|+++++|.++||+||||+|..++.+++..+.
T Consensus 44 ~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~vi~d~~~~~~~~~~~~~~-- 121 (350)
T d2c0ha1 44 FESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRL-- 121 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHHHH--
T ss_pred HHHHHHHHHHcCCCEEEECcccCccCCcccccCCCCCccChhhhHHHHHHHHHHHHCCCEEEEEeccccccCCCCccc--
Confidence 38999999999999999998775433221 11124457899999999999999999999999987654332110
Q ss_pred CCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC---------------------------CCChhHHH
Q 013777 234 RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP---------------------------GVALDTLK 285 (436)
Q Consensus 234 ~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~---------------------------~~~~~~~~ 285 (436)
....|. +...+.+.++|+.||+||+++|+|++|+|+|||... ......+.
T Consensus 122 --~~~~~~~~~~~~~~~~~~~~~a~r~~~~psv~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (350)
T d2c0ha1 122 --NGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIG 199 (350)
T ss_dssp --HHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHH
T ss_pred --CcccCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEEEecccccccCccccccccccccchhcccccccccccccHHHHH
Confidence 001112 445677889999999999999999999999999731 01245688
Q ss_pred HHHHHHHHHHHhhCCCeEEEEeC-CCC-C------CCh---hhhh--ccCCCCCcEEEEEeecCcCCCCCCCCChhhhHH
Q 013777 286 SYYKAGYDAVRKYTSTAYVIMSN-RLG-P------ADH---KELL--SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNID 352 (436)
Q Consensus 286 ~~~~~~~~aIR~~~p~~~Viv~~-~~~-~------~~~---~~~~--~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~ 352 (436)
.++..++.+||+.+|+++|.++. ... . ... ..+. .........+++.|.|..............
T Consensus 200 ~~~~~~~~~i~~~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~y~~~~~~~~~~~~~~--- 276 (350)
T d2c0ha1 200 RFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESPFKH--- 276 (350)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTBCCTTCTTSS---
T ss_pred HHHHHHHHHHHHhCCCceEEecccccCcCcccccccccccccccchhhcccccccceeccccCCCCCcchhhhhHHH---
Confidence 99999999999999999988762 110 0 000 0111 111234456899999976443211111100
Q ss_pred HHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecC
Q 013777 353 YVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 418 (436)
Q Consensus 353 ~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~ 418 (436)
.. .....++|++|||||+.... ....+ .+++. ++.....|+++|+|...
T Consensus 277 --------~~--~~~~~~kPv~igEfg~~~~~-~~~~~---~~~~~---~~~~~~~G~~~W~~~d~ 325 (350)
T d2c0ha1 277 --------SF--SNFRLKKPMVIGEFNQEHGA-GMSSE---SMFEW---AYTKGYSGAWTWSRTDV 325 (350)
T ss_dssp --------CG--GGGCCSSCEEEEECCGGGST-TCCHH---HHHHH---HHHTTCSEEEESCSSSS
T ss_pred --------HH--HhccCCCcEEEEecCCCCCC-CccHH---HHHHH---HHHhCCeEEEEEeeecC
Confidence 00 11223556999999975432 22222 22222 23334569999999763
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=99.88 E-value=1.8e-21 Score=194.42 Aligned_cols=238 Identities=16% Similarity=0.235 Sum_probs=154.3
Q ss_pred CCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 013777 158 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 235 (436)
Q Consensus 158 ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~ 235 (436)
.+++.|+.|+++|||+||||| |+..... ...++.. ..|+++++++++|+++||+||||||..+.... .+...
T Consensus 39 ~~~d~~~~lk~~G~n~VRl~v-w~~~~~~-~~~~~~~g~~~l~~~~~~~~~a~~~Gl~v~ldlH~sd~wad----p~~q~ 112 (387)
T d1ur4a_ 39 KKQDIFKTLKEAGVNYVRVRI-WNDPYDA-NGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWAD----PAKQK 112 (387)
T ss_dssp CBCCHHHHHHHTTCCEEEEEE-CSCCBCT-TCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCS----SSCCC
T ss_pred CcccHHHHHHHcCCCEEEeec-ccCCccc-ccCcCCCccccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcC----CCCCC
Confidence 456789999999999999999 5433221 2234433 36999999999999999999999997655332 22222
Q ss_pred CCCCCC----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC---CCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 236 GFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 236 ~~~~w~----~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
....|. ....+...++.+.+++++++.+ .+..|||.|||... ..+.+.+.+++++++++||+.+|+..|+++
T Consensus 113 ~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~ 192 (387)
T d1ur4a_ 113 APKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALH 192 (387)
T ss_dssp CCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CchhhhccchhHHHHHHHHHHHHHHHHHhhcCCCccEEEEecCCCcCccCcCCHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 334454 3344455556666666666655 46679999999853 236788999999999999999999999887
Q ss_pred C-CCCCCC-hhhhhcc--CCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCC
Q 013777 308 N-RLGPAD-HKELLSF--ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 383 (436)
Q Consensus 308 ~-~~~~~~-~~~~~~~--~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~ 383 (436)
. +..... ...+++. ....+..++.+|+|..|.. +... +.. .+..+.+..+++++|+|++..+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~w~~-----~~~~----~~~----~l~~l~~~~~k~v~v~E~~~~~t 259 (387)
T d1ur4a_ 193 FTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHG-----TLKN----LTS----VLTSVADTYGKKVMVAETSYTYT 259 (387)
T ss_dssp ECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSC-----CHHH----HHH----HHHHHHHHHCCEEEEEEECCCSC
T ss_pred ccCccchHHHHHHHHHHHhcCCCcccccceeecccCc-----cHHH----HHH----HHHHHHHHhCCceEEEEeccccc
Confidence 3 222222 1223322 1355789999999977532 2222 111 12223233356799999885432
Q ss_pred C------------------CCcCHHHHHHHHHHHHHHHcc---CCCcEEEEc
Q 013777 384 V------------------KDASKQDYQRFANAQLDVYGR---ATFGWAYWA 414 (436)
Q Consensus 384 ~------------------~~~~~~~~~~~~~~q~~~~~~---~~~Gw~~W~ 414 (436)
. ...+.+...+|++...++-.. .++|++||.
T Consensus 260 ~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~~~~G~G~~YWe 311 (387)
T d1ur4a_ 260 AEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWE 311 (387)
T ss_dssp SCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred CCCccccCccCCCccccccCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 1 012445555666555554332 478999994
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=99.87 E-value=3e-21 Score=190.47 Aligned_cols=259 Identities=10% Similarity=0.078 Sum_probs=159.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccC--------CCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC--
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIAND--------PTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE-- 229 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~--------~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~-- 229 (436)
+++|+.||++|+|+|||++.+..... +..++.+++..|+.||+++++|+++||+||||+|..+....+..
T Consensus 44 ~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~ 123 (410)
T d1uuqa_ 44 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQY 123 (410)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHHH
T ss_pred HHHHHHHHHCCCcEEEeCCcccccccccccCCCcccccccccHHHHHHHHHHHHHHHHcCCeeEEeccccccccCCcccc
Confidence 78999999999999999876432211 11234577789999999999999999999999998765332110
Q ss_pred ---CCCCCCCC--------------CCC-C-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCCCC---
Q 013777 230 ---HSATRDGF--------------QEW-G-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPGV--- 279 (436)
Q Consensus 230 ---~sg~~~~~--------------~~w-~-~~~~~~~~~~~~~lA~r--------y~~~~~v~g~eL~NEP~~~~~--- 279 (436)
..+..... ..| . +...+.+.+.++.+++| |+++|.|++++|.|||.....
T Consensus 124 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~~ 203 (410)
T d1uuqa_ 124 MAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTT 203 (410)
T ss_dssp HHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTCC
T ss_pred cccccCCCcCccccccccccccccccccccCHHHHHHHHHHHHHHHHhhhhhhhHhhcCChhHhhhhhccccCCccCccc
Confidence 00000000 011 1 44567788899999987 789999999999999986422
Q ss_pred --ChhHHHHHHHHHHHHHHhhCCCeEEEEeCC-CCC--CChhhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHH--
Q 013777 280 --ALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGP--ADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNID-- 352 (436)
Q Consensus 280 --~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~-~~~--~~~~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~-- 352 (436)
..+.+..+++.++++||+.+|+++|+++.. ... .....+..........++++|+|..+..............
T Consensus 204 ~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~~ 283 (410)
T d1uuqa_ 204 AEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSA 283 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHHH
T ss_pred ccchhhhhHHHHHHHhhhhhcCCCceEeecccccccccccccchhhhccCCccceEEeecCcccccccccccccccccch
Confidence 245788999999999999999999987631 110 1111222211233456889999964322222211111111
Q ss_pred --HHHHhhhhhHHHhhhcCCCeEEeecccccCCCCC----cC----HHHHHHHHHHHHHHHcc--CCCcEEEEceecCC
Q 013777 353 --YVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD----AS----KQDYQRFANAQLDVYGR--ATFGWAYWAHKCEA 419 (436)
Q Consensus 353 --~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~----~~----~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~~ 419 (436)
.... .......+.+..+.|++|+|||....... .. .+.++.+++.+...+.. ..+|+++|+|+..+
T Consensus 284 ~~~~~~-~~~~~~~~~~~~~kPv~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 361 (410)
T d1uuqa_ 284 WEKAQN-YMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYG 361 (410)
T ss_dssp HHHHHH-HHHHHHHHHHHHTCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETC
T ss_pred hhhhHH-HHHHHHHHHhhcCCCeeeeccccccCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecccCCC
Confidence 1111 11112222333355699999997543211 11 12234445555544433 35799999998764
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=6.9e-22 Score=165.31 Aligned_cols=104 Identities=23% Similarity=0.326 Sum_probs=88.8
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecC-CeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEEcC
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNE-TFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKD 82 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~ 82 (436)
.+|||||||+|| .|+|||+.++.||+|+|++..+ +.++||+.+|+||+++. ++.|+|+++++++||+|+|+..+
T Consensus 9 ~ngkyvsa~~G~--~v~An~~~~~~~e~F~le~~~~~~~~~Lr~~~gkyl~~~~---~g~v~a~~~~~~~~e~F~~~~~~ 83 (123)
T d1dfca3 9 ANERNVSTRQGM--DLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTA---TGGVQSTASSKNASCYFDIEWRD 83 (123)
T ss_dssp TTSCEEEC---C--BCEEEECCCSGGGCEEEEECTTTCCEEEEETTTEEEEECT---TSBEEEEESSCCGGGCBEEEEET
T ss_pred cCCCEEEEcCCC--EEEecccccCCcceEEEEECCCCCEEEEEeCCCCEEEEcC---CCcEEEccccCCCceEEEEEEeC
Confidence 589999999976 4999999999999999998664 57999999999999986 34599999999999999999874
Q ss_pred CCCcceEEeccCCceEEEeeCeEEEcCCCC-CCC
Q 013777 83 GDSSRVRLSASNGMFIQAISETRLTADYGS-SSW 115 (436)
Q Consensus 83 ~~~~~v~i~~~nG~~lq~~~~~~v~a~~~~-~~W 115 (436)
++++||+.||+||++.....+.|+... +.|
T Consensus 84 ---g~~alra~nG~yl~a~~~G~l~a~~~~~g~~ 114 (123)
T d1dfca3 84 ---RRITLRASNGKFVTSKKNGQLAASVETAGDS 114 (123)
T ss_dssp ---TEEEEECTTSSBCEECSSSBEESCCSSCCSS
T ss_pred ---CeEEEEeCCCCEEEeCCCCEEEEccCCCCCc
Confidence 479999999999999888888888765 444
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=1.4e-20 Score=159.27 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=84.2
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEec----CCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEE
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVN----ETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIV 79 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~ 79 (436)
.+|||||||.+|. .|+|||++++.||+|+|+++. ++++.||+++|+||+++.. +.|+|++++|++||+|+++
T Consensus 12 ~~gkYltAe~~G~-~v~a~~~~~~~~e~w~le~~~~~~~~~~v~Lrs~~Gkylsa~~~---g~v~a~~~~~~~~E~F~~~ 87 (133)
T d1dfca1 12 CGNKYLTAEAFGF-KVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKD---GNVTCEREVPGPDCRFLIV 87 (133)
T ss_dssp TTSCBCEECSSSS-CEECCCSSCCTTTCEECC--------CCBCCBCTTSCEEEECTT---SCEEEEESSCCGGGCEECC
T ss_pred cCCcEEEEECCCC-EEEeeCCCCCCCcEEEEEEecCCCCCCEEEEEecCCCEEeeccC---cceEEcCCCCCCCcEEEEE
Confidence 4899999999885 589999999999999999764 4679999999999999973 3599999999999999999
Q ss_pred EcCCCCcceEEec-cCCceEEEeeCeEEEcCCC
Q 013777 80 RKDGDSSRVRLSA-SNGMFIQAISETRLTADYG 111 (436)
Q Consensus 80 ~~~~~~~~v~i~~-~nG~~lq~~~~~~v~a~~~ 111 (436)
.++|+ ++.|++ .||+||.+++..+ .|...
T Consensus 88 ~~~dG--~~~l~s~~nG~yl~~~~~~l-~a~~~ 117 (133)
T d1dfca1 88 AHDDG--RWSLQSEAHRRYFGGTEDRL-SCFAQ 117 (133)
T ss_dssp BCSSS--CBCCEETTTCCEEEEETTEE-EEEES
T ss_pred ECCCC--EEEEEEcCCCcEEEecCCce-EEeCC
Confidence 98765 578898 7999999987764 44443
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=99.77 E-value=1.4e-17 Score=162.43 Aligned_cols=232 Identities=16% Similarity=0.185 Sum_probs=154.4
Q ss_pred CHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013777 159 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~ 238 (436)
+++-++.||++|||+|||+| | .+|.+. ...++.++++++.|+++||+|+||+|..+.. ...+....+.
T Consensus 29 ~~d~~~~lk~~G~n~VRlrv--W--~~p~~g----~~~~~~~~~~~~~a~~~Gm~vll~~hysd~W----adp~~q~~P~ 96 (334)
T d1foba_ 29 TQALETILADAGINSIRQRV--W--VNPSDG----SYDLDYNLELAKRVKAAGMSLYLDLHLSDTW----ADPSDQTTPS 96 (334)
T ss_dssp BCCHHHHHHHHTCCEEEEEE--C--SCCTTC----TTCHHHHHHHHHHHHHTTCEEEEEECCSSSC----CBTTBCBCCT
T ss_pred cccHHHHHHHcCCCEEEeee--e--eCCCCC----cCcHHHHHHHHHHHHHCCCEEEEEecCCCcc----cCCCcCCCcc
Confidence 35568889999999999998 4 355432 2379999999999999999999999976542 1222223344
Q ss_pred CCC----hhHHHHHHHHHHHHHHHhCCCCc-eeEEEeecCCCCC-------CCChhHHHHHHHHHHHHHHhhCCC--eEE
Q 013777 239 EWG----DSNVADTVAVIDFLAARYANRPS-LAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKYTST--AYV 304 (436)
Q Consensus 239 ~w~----~~~~~~~~~~~~~lA~ry~~~~~-v~g~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~--~~V 304 (436)
.|. +...+.+.++++.++++|++... +..+++.|||... ..+.+.+.++.+.++++||+++|. ..|
T Consensus 97 aw~~~~~~~~~~~~~~~t~~v~~~~k~~~~~~~~vqIgNE~n~g~~w~~g~~~~~~~~a~ll~a~~~aVr~~~~~~~~~i 176 (334)
T d1foba_ 97 GWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKI 176 (334)
T ss_dssp TSCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEE
T ss_pred cccccccccHHHHHHHHHHHHHHHHHhcCCCceEEEcccccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcccccce
Confidence 565 45677888999999999998754 5679999998742 235578999999999999999854 445
Q ss_pred EEeCCCCCCCh-------hhhhccC--CCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEe
Q 013777 305 IMSNRLGPADH-------KELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 375 (436)
Q Consensus 305 iv~~~~~~~~~-------~~~~~~~--~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~v 375 (436)
+++...+ .+. ..+.... ...+-.|+.+|+|+.|... .+ ++.+.. .+..+....+++++|
T Consensus 177 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~Dvig~syYp~w~~~---~~----l~~l~~----~l~~l~~~y~k~v~I 244 (334)
T d1foba_ 177 MIHLDDG-WSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSAS---AT----LASLKT----SLANLQSTYDKPVVV 244 (334)
T ss_dssp EEEESCT-TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTT---CC----HHHHHH----HHHHHHHHHCCCEEE
T ss_pred eeecccC-CChhhhHHHHHHHHhcCCCCCCCcCeEEEecCCCCCCc---cc----HHHHHH----HHHHHHHHhCCceEE
Confidence 5553222 121 1122111 1224479999999776421 12 222222 223333333556999
Q ss_pred ecccccCCCC-------------CcCHHHHHHHHHHHHHHHcc--CCCcEEEEc
Q 013777 376 GEWTCEWNVK-------------DASKQDYQRFANAQLDVYGR--ATFGWAYWA 414 (436)
Q Consensus 376 GEwg~~~~~~-------------~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~ 414 (436)
.|++..+... ..+.+...+|+.++..+..+ .+.|.+||.
T Consensus 245 ~Et~~~~t~~~~~~~~~~~~~~~p~s~~gQa~yl~~~~~~~~~~~~G~G~~YWe 298 (334)
T d1foba_ 245 VETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWE 298 (334)
T ss_dssp EECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred EEecccccCCcccccccccccCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEeC
Confidence 9998654311 14566778888877766532 578999996
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=99.75 E-value=3.9e-17 Score=158.07 Aligned_cols=232 Identities=15% Similarity=0.141 Sum_probs=149.3
Q ss_pred CHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 013777 159 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 238 (436)
Q Consensus 159 te~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~ 238 (436)
+++.|+.||++|||+||||+ | .+|.++ ...|++++++++.|+++||+||||+|..++.... +......
T Consensus 29 ~~~~~~~lk~~G~n~VRi~v-W---~~p~~g----~~~~~~~~~~v~~a~~~gl~vil~~h~~~~wa~~----~~~~~p~ 96 (332)
T d1hjsa_ 29 AQPLENILAANGVNTVRQRV-W---VNPADG----NYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADP----AHQTMPA 96 (332)
T ss_dssp BCCHHHHHHHTTCCEEEEEE-C---SSCTTC----TTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBT----TBCBCCT
T ss_pred cccHHHHHHHcCCCEEEeee-e---ecCCCC----ccCHHHHHHHHHHHHHCCCEEEEEecCCccccCc----cccCCCc
Confidence 46788999999999999998 4 355432 2369999999999999999999999988764321 1122233
Q ss_pred CCC---hhHHHHHHHHHHHHHHHhCCCCce-eEEEeecCCCCC-------CCChhHHHHHHHHHHHHHHhhCC--CeEEE
Q 013777 239 EWG---DSNVADTVAVIDFLAARYANRPSL-AAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKYTS--TAYVI 305 (436)
Q Consensus 239 ~w~---~~~~~~~~~~~~~lA~ry~~~~~v-~g~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p--~~~Vi 305 (436)
.|. +...+...++|+.++++|++.... ..+++.|||... ....+.+.++++.++++||+.++ ...|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~~~~k~~~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~l~~~a~~av~~~~~~~~~~v~ 176 (332)
T d1hjsa_ 97 GWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIM 176 (332)
T ss_dssp TCCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHhcCCchhHhhhccccCCcccCccCCcchHHHHHHHHHHHHHHHHhhccCCCccee
Confidence 444 345667889999999999987754 446788887631 13456788999999999999764 44444
Q ss_pred EeCCCCCCCh-------hhhhccC--CCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEee
Q 013777 306 MSNRLGPADH-------KELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 376 (436)
Q Consensus 306 v~~~~~~~~~-------~~~~~~~--~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vG 376 (436)
+....+ .+. ..++... ...+-.++++|+|..++. ..+.....+.+ ..+.+..+.++++.
T Consensus 177 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~ig~~~Y~~~~~---~~~~~~~~~~~--------~~~~~~~g~~v~i~ 244 (332)
T d1hjsa_ 177 IHLDNG-WDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSS---SATLSALKSSL--------DNMAKTWNKEIAVV 244 (332)
T ss_dssp EEESCT-TCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCT---TCCHHHHHHHH--------HHHHHHHCCEEEEE
T ss_pred ecccCc-CchhhhhhHHHHHHhcCcccCCccceEeeeecCCCCC---CCCHHHHHHHH--------HHHHHHhCCceEEE
Confidence 442111 222 1122211 122457999999976432 12222222221 12222235679999
Q ss_pred cccccCCC-------------CCcCHHHHHHHHHHHHHHHcc--CCCcEEEEc
Q 013777 377 EWTCEWNV-------------KDASKQDYQRFANAQLDVYGR--ATFGWAYWA 414 (436)
Q Consensus 377 Ewg~~~~~-------------~~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~ 414 (436)
|++..+.. ...+.+...+|+...+.+..+ .++|.+||.
T Consensus 245 E~~~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~~~~~~~~~~~~~~g~G~~yW~ 297 (332)
T d1hjsa_ 245 ETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWE 297 (332)
T ss_dssp ECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred EeccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 99864321 123566677888877766544 468999994
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.71 E-value=2.6e-17 Score=135.81 Aligned_cols=102 Identities=9% Similarity=0.183 Sum_probs=87.0
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEEcCC
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDG 83 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~~ 83 (436)
.+||||.||.+ .|.++|..++.||.|+|.+. +++++||+++|+|||+++ ++.|+|++++|+.||+|+|++.+
T Consensus 9 ~~gkyL~a~~~---~v~~~~~~~~~~~~F~ve~~-~g~iaLks~~GkYlsa~~---~g~l~~~~~~~~~~E~F~ie~~~- 80 (118)
T d1hcda_ 9 HHGHFLSAEGE---AVKTHHGHHDHHTHFHVENH-GGKVALKTHCGKYLSIGD---HKQVYLSHHLHGDHSLFHLEHHG- 80 (118)
T ss_dssp STTCEEEEETT---EEEEECSCSSCCCCCEEEEE-TTEEEEESSSSCEEEEEE---TTEEEEECCCSSSSSSBEEEEET-
T ss_pred CCCcEEeecCC---ceEeeCCCCCCCceEEEEcC-CCEEEEEeCCCCEEEecC---CCcEEEeccCCCCceEEEEEECC-
Confidence 58999999966 37899999999999999876 689999999999999997 34699999999999999999864
Q ss_pred CCcceEEeccCCceEEEeeCeE--EEcCCCC-CCC
Q 013777 84 DSSRVRLSASNGMFIQAISETR--LTADYGS-SSW 115 (436)
Q Consensus 84 ~~~~v~i~~~nG~~lq~~~~~~--v~a~~~~-~~W 115 (436)
.+|.|++.||+||+++.... .+++... ++|
T Consensus 81 --g~valrs~nGkylsa~~~g~v~~n~~~~~~~~W 113 (118)
T d1hcda_ 81 --GKVSIKGHHHHYISADHHGHVSTKEHHDHDTTF 113 (118)
T ss_dssp --TEEEEECSTTCEEEECGGGCEEEESSCSSTTCB
T ss_pred --CEEEEEeCCCCEEEEcCCCceeeEcCCCCCCCc
Confidence 47999999999999975544 4555554 567
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=99.57 E-value=9.8e-15 Score=140.74 Aligned_cols=253 Identities=12% Similarity=0.106 Sum_probs=145.0
Q ss_pred HHHHHH-HhCCCCEEEecCccccccCCC----CCCCCccc-hHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCC
Q 013777 161 EDFKFL-SSNGINAVRIPVGWWIANDPT----PPKPFVGG-SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATR 234 (436)
Q Consensus 161 ~d~~~i-a~~G~N~VRipv~~~~~~~~~----~~~~~~~~-~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~ 234 (436)
++++.+ +++|++.||++-.|....... ..++-... .+..+|++|+.|+++||++++.|...|+...........
T Consensus 24 ~~l~~~~~~lG~~~vR~~~~~~~~~~~~~~~~~~~~~~~~yd~~~~D~~~~~~~~~g~~~~~~l~~~p~~~~~~~~~~~~ 103 (346)
T d1uhva2 24 ETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFTYIDRIFDSFLEIGIRPFVEIGFMPKKLASGTQTVFY 103 (346)
T ss_dssp HHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEECCHHHHHHHHHHHHHTCEECEEECCCCTTTBSSCCEETT
T ss_pred HHHHHHHHhcCCCEEEccCcccccCccccccccCccCCcccChHhHHHHHHHHHHcCCCeEEEEeccCccccCCCCCccc
Confidence 445544 679999999974331110000 00000001 368899999999999999999999877643211110000
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHhCC-----CCceeEEEeecCCCCC----CCChhHHHHHHHHHHHHHHhhCCCeEEE
Q 013777 235 DGFQEWGDSNVADTVAVIDFLAARYAN-----RPSLAAIELINEPLAP----GVALDTLKSYYKAGYDAVRKYTSTAYVI 305 (436)
Q Consensus 235 ~~~~~w~~~~~~~~~~~~~~lA~ry~~-----~~~v~g~eL~NEP~~~----~~~~~~~~~~~~~~~~aIR~~~p~~~Vi 305 (436)
.......+...+.+.++++.+++||++ .+.+..||+.|||... ..+.+.+.+++++++++||+.+|+..|+
T Consensus 104 ~~~~~~~p~~~~~w~~~v~~~~~~y~~~~~~~~~~~~~~evwNEp~~~~~~~~~~~~~y~~~~~~~~~aik~~~P~~~v~ 183 (346)
T d1uhva2 104 WEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKDADEKEYFKLYKVTAKAIKEVNENLKVG 183 (346)
T ss_dssp TTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEESSCTTSTTTSGGGCHHHHHHHHHHHHHHHHHHCTTSCEE
T ss_pred ccccCCChhhHHHHHHHHHHHHHHHHhhcCcccccccccccccCcccccCCCCCCHHHHHHHHHHHHHHHhccCCCceEe
Confidence 000001156778999999999999976 3457789999999853 2356789999999999999999998887
Q ss_pred EeCCCCCCC--hhhhhccC--CCCCcEEEEEeecCcCCCCCCC-------CChhhhHHHHHHhhhhhHHHhhhc--CCCe
Q 013777 306 MSNRLGPAD--HKELLSFA--SGLSRVVIDVHYYNLFSNNFNG-------LNVQQNIDYVNNQRASDLGAVTTS--NGPL 372 (436)
Q Consensus 306 v~~~~~~~~--~~~~~~~~--~~~~nvv~~~H~Y~~~~~~~~~-------~~~~~~i~~i~~~~~~~~~~~~~~--~~p~ 372 (436)
..+...... ...++... ....-.++++|.|......... ...+.....+. .... .+... .+.|
T Consensus 184 ~~~~~~~~~~~~~~~l~~~~~~~~~~D~i~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~p 259 (346)
T d1uhva2 184 GPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSKQGEYTPHLIYQEIMPSEYMLNEFK-TVRE---IIKNSHFPNLP 259 (346)
T ss_dssp EEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBCCCCCCSSCCCCCBCCHHHHHHHHH-HHHH---HHHTSSCTTCC
T ss_pred eccccCCccccHHHHHHHHHhcCCcccceeeecCCCCCCcCCccchhhhhhhhhhHHHHHH-HHHH---HHHhcCCCCcc
Confidence 653222111 12222211 2334568999999753221111 11111111211 1111 11222 2346
Q ss_pred EEeecccccCCCCCc--CHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 373 TFVGEWTCEWNVKDA--SKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 373 v~vGEwg~~~~~~~~--~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
++++|||........ .......|+...+........+..+|++..
T Consensus 260 i~~tE~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~d 306 (346)
T d1uhva2 260 FHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSD 306 (346)
T ss_dssp EEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred ceeccccCCCCCCCCcccHHHHHHHHHHHHHHhcccccEEEEEEeec
Confidence 999999975432211 122334455444443334566888898865
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.56 E-value=1.2e-15 Score=125.74 Aligned_cols=73 Identities=11% Similarity=0.084 Sum_probs=62.9
Q ss_pred CCcccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEE
Q 013777 1 MSTKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQI 78 (436)
Q Consensus 1 ~s~~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~ 78 (436)
|| .+||||||+++| .|+|||+.+++||+|++.+- +++++||+.||+||++++. |...+.+++++++.||+|.|
T Consensus 46 ks-~~GkYlsa~~~g--~l~~~~~~~~~~E~F~ie~~-~g~valrs~nGkylsa~~~-g~v~~n~~~~~~~~WE~f~i 118 (118)
T d1hcda_ 46 KT-HCGKYLSIGDHK--QVYLSHHLHGDHSLFHLEHH-GGKVSIKGHHHHYISADHH-GHVSTKEHHDHDTTFEEIII 118 (118)
T ss_dssp ES-SSSCEEEEEETT--EEEEECCCSSSSSSBEEEEE-TTEEEEECSTTCEEEECGG-GCEEEESSCSSTTCBEEECC
T ss_pred Ee-CCCCEEEecCCC--cEEEeccCCCCceEEEEEEC-CCEEEEEeCCCCEEEEcCC-CceeeEcCCCCCCCceeEEC
Confidence 45 589999999877 69999999999999999975 6899999999999999973 34456677888899999976
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=4.6e-13 Score=127.06 Aligned_cols=213 Identities=17% Similarity=0.222 Sum_probs=132.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+.. .+. . +.+.+.|.++||.|+.|+...... ...
T Consensus 39 ~~d~~~~k~~G~N~iR~~~------~~~--~----------~~~~~~cD~~Gilv~~e~~~~~~~------------~~~ 88 (304)
T d1bhga3 39 VKDFNLLRWLGANAFRTSH------YPY--A----------EEVMQMCDRYGIVVIDECPGVGLA------------LPQ 88 (304)
T ss_dssp HHHHHHHHHHTCCEEECTT------SCC--S----------STHHHHHSTTCCEEEECCSCCCTT------------SSG
T ss_pred HHHHHHHHHcCCCEEEecC------CCC--h----------HHHHHHHHhcCCeeeecccccccc------------ccc
Confidence 6899999999999999832 111 1 135778999999999998754211 011
Q ss_pred C-ChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCCCChhhh
Q 013777 240 W-GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKEL 318 (436)
Q Consensus 240 w-~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~~~~~~ 318 (436)
. .+...+.+.+.++.++++++++|+|++|++.|||.. .......+.+.+++.||+.||+++|......... ....
T Consensus 89 ~~~~~~~~~~~~~~~~~i~~~rnhPsI~~w~~~NE~~~---~~~~~~~~~~~~~~~ik~~Dptrpv~~~~~~~~~-~~~~ 164 (304)
T d1bhga3 89 FFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPAS---HLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYA-ADKG 164 (304)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEESCCT---TSHHHHHHHHHHHHHHHTTCCSSCEEEEBCCCTT-TCSS
T ss_pred ccchHHHHHHHHHHHHHHHHhcCCCcHHHhccCCCCCc---ccchhhhhhHHHHHHHHhhCCCCceeeecccccc-cccc
Confidence 1 146778889999999999999999999999999974 3455678899999999999999998887543211 1111
Q ss_pred hccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC-------CcCHHH
Q 013777 319 LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-------DASKQD 391 (436)
Q Consensus 319 ~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~-------~~~~~~ 391 (436)
.....+++.|.|..+...+. ... ............+.+....|+++.|+|...... ..+.+.
T Consensus 165 -----~~~~d~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~p~~~~e~g~~~~~~~~~~~~~~~~e~~ 233 (304)
T d1bhga3 165 -----APYVDVICLNSYYSWYHDYG--HLE----LIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEY 233 (304)
T ss_dssp -----GGGCSSEEEECCTTSSSSTT--CHH----HHHHHHHHHHHHHHHHSCSCEEEEECCCCCCTTCCCSSCCSSCHHH
T ss_pred -----cccccccccccccccccccc--chh----hhhhhhhHHHHHhhccCCCCeEEecchhhcccccCCCcccccCHHH
Confidence 11224577777755322111 111 111111122222333345569999999753211 112222
Q ss_pred HHHHHHH---HHHHHcc-CCCcEEEEceec
Q 013777 392 YQRFANA---QLDVYGR-ATFGWAYWAHKC 417 (436)
Q Consensus 392 ~~~~~~~---q~~~~~~-~~~Gw~~W~~k~ 417 (436)
...+++. +++.... ..+|-++|++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~G~~~w~~~D 263 (304)
T d1bhga3 234 QKSLLEQYHLGLDQKRRKYVVGELIWNFAD 263 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEESBC
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeeeEe
Confidence 2233222 2222222 357888999875
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=2.3e-14 Score=116.35 Aligned_cols=92 Identities=18% Similarity=0.310 Sum_probs=74.7
Q ss_pred cEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEEEcCCCCc
Q 013777 7 KYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIVRKDGDSS 86 (436)
Q Consensus 7 ~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~~~~~~~~ 86 (436)
-|||+..+++ .|.|||+ .||+|+|.. ++++|+||++||+|+++++. +.|++.+++ +|.|+|...++ +
T Consensus 11 Gfv~~~~~~~-~l~~Nr~---~~e~F~l~~-~~g~y~lr~~~gkyw~~~~d---G~l~~~~~~---~~~F~le~~~~--~ 77 (111)
T d1dfca4 11 GFIGCRKVTG-TLDANRS---SYDVFQLEF-NDGAYNIKDSTGKYWTVGSD---SAVTSSGDT---PVDFFFEFCDY--N 77 (111)
T ss_dssp EEEEECSSSC-BEEEEES---SCCCBEEEE-ETTEEEEECTTSCBCEECSS---CBEESCCSS---CCCBEEEEEET--T
T ss_pred ceEEecCCCC-eEEEcCC---CCcEEEEEE-cCCEEEEEcCCCCEEEEcCC---CcEEeCCCC---CCCEEEEEeCC--C
Confidence 4788888765 5999995 699999965 67899999999999999873 447776654 48899888763 4
Q ss_pred ceEEeccCCceEEEeeCeEEEcCCCC
Q 013777 87 RVRLSASNGMFIQAISETRLTADYGS 112 (436)
Q Consensus 87 ~v~i~~~nG~~lq~~~~~~v~a~~~~ 112 (436)
++.|++ ||+||+++....+.|+...
T Consensus 78 ~~~~~a-nGkYL~~~~~G~L~A~~~~ 102 (111)
T d1dfca4 78 KVAIKV-GGRYLKGDHAGVLKASAET 102 (111)
T ss_dssp EEEEEE-TTEEEEECGGGBEEEEESS
T ss_pred EEEEcc-CCeEEEeCCCCeEEeCCCC
Confidence 688886 9999999988888887754
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=2.7e-14 Score=120.11 Aligned_cols=69 Identities=16% Similarity=0.328 Sum_probs=63.6
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEe-CCceEEeecCCCCceEEEEecCCCCCceEEE
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAGYSETFQI 78 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~ 78 (436)
.+||||||+.+| .|+|||+++++||+|++....+++++||+. ||+||++++ + .|+|++++++++|.|.|
T Consensus 58 ~~Gkylsa~~~g--~v~a~~~~~~~~E~F~~~~~~dG~~~l~s~~nG~yl~~~~---~-~l~a~~~~~~~~e~f~v 127 (133)
T d1dfca1 58 HLGRYLAADKDG--NVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTE---D-RLSCFAQTVSPAEKWSV 127 (133)
T ss_dssp TTSCEEEECTTS--CEEEEESSCCGGGCEECCBCSSSCBCCEETTTCCEEEEET---T-EEEEEESSCCGGGCBEE
T ss_pred cCCCEEeeccCc--ceEEcCCCCCCCcEEEEEECCCCEEEEEEcCCCcEEEecC---C-ceEEeCCCCCCCeeEEE
Confidence 589999999887 599999999999999999999999999995 999999985 2 39999999999999986
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=1.3e-13 Score=114.26 Aligned_cols=70 Identities=24% Similarity=0.256 Sum_probs=63.4
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEEEE
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQIV 79 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~ 79 (436)
.+|||||++..| .|+|+|+++++||+|+|..- +++++||+.||+||++++ ++.|.|++++||.||.|.|.
T Consensus 51 ~~gkyl~~~~~g--~v~a~~~~~~~~e~F~~~~~-~g~~alra~nG~yl~a~~---~G~l~a~~~~~g~~e~f~i~ 120 (123)
T d1dfca3 51 HTGKYWTLTATG--GVQSTASSKNASCYFDIEWR-DRRITLRASNGKFVTSKK---NGQLAASVETAGDSELFLMK 120 (123)
T ss_dssp TTTEEEEECTTS--BEEEEESSCCGGGCBEEEEE-TTEEEEECTTSSBCEECS---SSBEESCCSSCCSSSEEEEE
T ss_pred CCCCEEEEcCCC--cEEEccccCCCceEEEEEEe-CCeEEEEeCCCCEEEeCC---CCEEEEccCCCCCceEEEEE
Confidence 689999998766 69999999999999999875 689999999999999987 34699999999999999975
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=99.37 E-value=1e-11 Score=124.34 Aligned_cols=144 Identities=21% Similarity=0.263 Sum_probs=105.8
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+ .|...+++++..++..+++|+.|.++||.+||+||+..--+.
T Consensus 51 d~y~~y--~eDi~ll~~lG~~~yRfsi~WsRI-~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hfd~P~~----- 122 (426)
T d1ug6a_ 51 DHYRRY--EEDIALMQSLGVRAYRFSVAWPRI-LPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA----- 122 (426)
T ss_dssp CHHHHH--HHHHHHHHHHTCCEEEEECCHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chhhhh--HHHHHHHHHcCCCEEEccCCHHHc-ccCCCCCcChHHHHHHHHHHHHHHHcCCeEEEEecccccchh-----
Confidence 567666 999999999999999999998655 455446778889999999999999999999999998632110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCC-Chh-------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-ALD-------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~-~~~-------~~~~~~~~ 290 (436)
......|. +...+.+.++.+.++++|++.... |-.+|||.. ++. +.. .+..-...
T Consensus 123 --l~~~gGw~~~~~~~~F~~Ya~~v~~~fgd~V~~--w~TiNEP~~~~~~gy~~G~~ppg~~~~~~~~~~~~~~~~Aha~ 198 (426)
T d1ug6a_ 123 --LEERGGWRSRETAFAFAEYAEAVARALADRVPF--FATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGL 198 (426)
T ss_dssp --HHTTTGGGSHHHHHHHHHHHHHHHHHHTTTCCE--EEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hhccCccCCHHHHHHHHHHHHHHHHHhCcccce--EEEecCCeeEeeeccccCccccCCcchHHHHHHHHHHHHHHHH
Confidence 01122465 788999999999999999987654 568999962 111 111 12223455
Q ss_pred HHHHHHhhCCCeEEEEe
Q 013777 291 GYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv~ 307 (436)
+++++|+..+..+.++.
T Consensus 199 a~~~~~~~~~~~~~~~~ 215 (426)
T d1ug6a_ 199 AVEALRAAGARRVGIVL 215 (426)
T ss_dssp HHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHhCCCceeEEe
Confidence 77888888776554443
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=99.31 E-value=3e-11 Score=121.59 Aligned_cols=143 Identities=17% Similarity=0.283 Sum_probs=106.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+ .|.+.+++++..++..+++|+.|+++||.+||+||+..--+.
T Consensus 55 d~y~~y--~eDi~l~~~lG~~~yRfSi~WsRI-~P~g~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~dlP~~----- 126 (447)
T d1e4ia_ 55 DSYHRY--EEDIRLMKELGIRTYRFSVSWPRI-FPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA----- 126 (447)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chhHhh--HHHHHHHHHhCCCEEEccCCHHHc-ccCCCCCcCHHHHHHHHHHHHHHHHhCCeEEEEeeccccchh-----
Confidence 567666 999999999999999999998655 555446778889999999999999999999999998632110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCC-Chh-------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-ALD-------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~-~~~-------~~~~~~~~ 290 (436)
......|. +...+.+.++.+.++++|++. |--|-.+|||.. |+. +.. .+......
T Consensus 127 --l~~~gGw~n~~~~~~F~~Ya~~v~~~fgdr--V~~W~TiNEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~AHa~ 202 (447)
T d1e4ia_ 127 --LQDAGGWGNRRTIQAFVQFAETMFREFHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGL 202 (447)
T ss_dssp --HHHTTTTSSTHHHHHHHHHHHHHHHHTBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hhcCCCCCCHHHHHHHHHHHHHHHHHhCCc--cceEEecCCCceeeecccccccccCcccchhhHHHhHHHHHHHHHH
Confidence 00112455 788999999999999999985 445779999973 111 111 12233446
Q ss_pred HHHHHHhhCCCeEEEE
Q 013777 291 GYDAVRKYTSTAYVIM 306 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv 306 (436)
+++++|+..+...|-+
T Consensus 203 a~~~~~~~~~~~~vGi 218 (447)
T d1e4ia_ 203 SVRRFRELGTSGQIGI 218 (447)
T ss_dssp HHHHHHHHTCSSEEEE
T ss_pred HHHHHHHhhhcceeee
Confidence 7788888888765544
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=99.30 E-value=4.2e-11 Score=120.37 Aligned_cols=141 Identities=16% Similarity=0.210 Sum_probs=105.0
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+ .|.+.+.+++..++..+++|+.|+++||++||+||+..-.+.
T Consensus 54 d~y~~y--~eDi~l~~~lG~~~yRfsi~WsRi-~P~g~g~~n~~~~~~Y~~~i~~l~~~GI~P~VTL~Hf~~P~w----- 125 (443)
T d2j78a1 54 DHYNRW--KEDIEIIEKLGVKAYRFSISWPRI-LPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFA----- 125 (443)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chhhhh--HHHHHHHHHcCCCEEEccCCHHHc-eeCCCCCcCHHHHHHHHHHHHHHHHcCCeeeEeecCccchhh-----
Confidence 567666 999999999999999999998755 455446788889999999999999999999999998632110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCC-Ch-------hHHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~-~~-------~~~~~~~~~ 290 (436)
......|. +...+.+.++.+.++++|++.-.. |-.+|||.. ++. +. ..+.....+
T Consensus 126 --l~~~gGw~~~~~v~~F~~Ya~~v~~~~gd~V~~--w~TiNEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~n~l~AHa~ 201 (443)
T d2j78a1 126 --LQLKGGWANREIADWFAEYSRVLFENFGDRVKN--WITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHAR 201 (443)
T ss_dssp --HHTTTGGGSTTHHHHHHHHHHHHHHHHTTTCCE--EEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hhhcCCccChHHHHHHHHHHHHHHHHhCccccc--eEeccCceeEeecccccCcccccccchHHHHHHHHHHHHHHHH
Confidence 00112355 688999999999999999986443 568999974 111 11 112334567
Q ss_pred HHHHHHhhCCCeEE
Q 013777 291 GYDAVRKYTSTAYV 304 (436)
Q Consensus 291 ~~~aIR~~~p~~~V 304 (436)
+++++|+..++..|
T Consensus 202 A~~~~~~~~~~~~v 215 (443)
T d2j78a1 202 AVKVFRETVKDGKI 215 (443)
T ss_dssp HHHHHHHHCTTCEE
T ss_pred HHHHhhhcccCCce
Confidence 78888888876543
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=99.26 E-value=7.6e-11 Score=118.63 Aligned_cols=144 Identities=15% Similarity=0.215 Sum_probs=107.0
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+ .|+..+.+++..++..+++|+.|+++||.++|+||+..--+.
T Consensus 55 d~y~~y--~eDi~l~~~lG~~~yRfSi~WsRi-~P~g~g~~n~~~~~~Y~~~i~~l~~~gi~P~vTL~H~d~P~~----- 126 (449)
T d1qoxa_ 55 DSYHRV--EEDVQLLKDLGVKVYRFSISWPRV-LPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQA----- 126 (449)
T ss_dssp CTTSCH--HHHHHHHHHHTCSEEEEECCHHHH-STTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chhhhh--HHHHHHHHHcCCCEEEccCCHHHc-ccCCCCCcCHHHHHHHHHHHHHHHhcCCeEEEEEecccccch-----
Confidence 577766 999999999999999999998755 555445678889999999999999999999999998642110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCC-Chh-------HHHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGV-ALD-------TLKSYYKA 290 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~-~~~-------~~~~~~~~ 290 (436)
......|. +...+.+.++.+.++++|++. |--|-.+|||.. |+. +.. .+..-...
T Consensus 127 --l~~~gGw~~~~~~~~F~~Ya~~v~~~fgd~--V~~W~T~NEP~~~~~~gy~~g~~~Pg~~~~~~~~~~~~~~~~Aha~ 202 (449)
T d1qoxa_ 127 --LQDQGGWGSRITIDAFAEYAELMFKELGGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGR 202 (449)
T ss_dssp --HHTTTGGGSTHHHHHHHHHHHHHHHHHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hccccCcCCHHHHHHHHHHHHHHHHHhccc--ccceEEecCcceeccccccccccCcccccHHHHHHHHHHHHHHHHH
Confidence 01122455 788999999999999999985 334678999974 111 111 12234556
Q ss_pred HHHHHHhhCCCeEEEEe
Q 013777 291 GYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 291 ~~~aIR~~~p~~~Viv~ 307 (436)
+++++|+..++..|-+.
T Consensus 203 a~~~~~~~~~~~~vgi~ 219 (449)
T d1qoxa_ 203 AVTLFRELGISGEIGIA 219 (449)
T ss_dssp HHHHHHHTTCCSEEEEE
T ss_pred HHHHHHhhCCCceeeee
Confidence 77888988887655543
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=99.23 E-value=4.4e-11 Score=121.00 Aligned_cols=141 Identities=16% Similarity=0.202 Sum_probs=103.4
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+ .|...+++++..++..+++|+.|.++||.++|+||+..--|.
T Consensus 51 d~y~~y--~eDi~l~~~lG~~~yRfSisWsRI-~P~g~g~~n~~gl~~Y~~~id~l~~~GI~P~VTL~H~dlP~~----- 122 (468)
T d1pbga_ 51 DFYHKY--PVDLELAEEYGVNGIRISIAWSRI-FPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEA----- 122 (468)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHH-STTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHH-----
T ss_pred chhhhh--HHHHHHHHHhCCCEEEccCCHHHc-CcCCCCCcCHHHHHHHHHHHHHHHHhCCeeEEEEecccchhh-----
Confidence 567666 999999999999999999998755 455445788889999999999999999999999998632110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC------------CCCC--hh-------HHHHHHH
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA------------PGVA--LD-------TLKSYYK 289 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~------------~~~~--~~-------~~~~~~~ 289 (436)
......|. +...+.++++.+.++++|++. . -|-.+|||.. |... .. .+.....
T Consensus 123 --l~~~GGw~~~~~v~~F~~Ya~~~~~~fgdv--k-~W~T~NEP~~~~~~gy~~G~~~P~~~~~~~~~~~~~hn~l~AHa 197 (468)
T d1pbga_ 123 --LHSNGDFLNRENIEHFIDYAAFCFEEFPEV--N-YWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHA 197 (468)
T ss_dssp --HHHTTGGGSTHHHHHHHHHHHHHHHHCTTC--C-EEEEESCHHHHHHHHHTSCCSTTCCCSCHHHHHHHHHHHHHHHH
T ss_pred --HhhcCccCCHHHHHHHHHHHHHHHHhcCCc--e-EEEEecCccccccccccccccCCccccchhhHHHhhhhHHHHHH
Confidence 00112365 688999999999999999753 2 3779999983 1111 11 1222334
Q ss_pred HHHHHHHhhCCCeEEE
Q 013777 290 AGYDAVRKYTSTAYVI 305 (436)
Q Consensus 290 ~~~~aIR~~~p~~~Vi 305 (436)
++++++|+..++..|-
T Consensus 198 ~a~~~~~~~~~~~~ig 213 (468)
T d1pbga_ 198 RAVKLYKDKGYKGEIG 213 (468)
T ss_dssp HHHHHHHHTTCSSEEE
T ss_pred HHHHHHHhhccccccc
Confidence 6777888888775443
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=99.20 E-value=7.6e-11 Score=119.10 Aligned_cols=112 Identities=19% Similarity=0.275 Sum_probs=90.0
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+ .|...+++++..++..+++|+.|.++||.+||+||+..--+.
T Consensus 54 d~y~~y--~eDi~l~~~lG~~~yRfSi~WsRI-~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~HfdlP~~----- 125 (464)
T d1gnxa_ 54 DHYHRW--REDVALMAELGLGAYRFSLAWPRI-QPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQE----- 125 (464)
T ss_dssp CHHHHH--HHHHHHHHHTTCSEEEEECCHHHH-SGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chhhhh--HHHHHHHHHcCCCEEEccCCHHHc-ccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEecCccHHH-----
Confidence 567666 999999999999999999998655 454346788889999999999999999999999998632110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
......|. +...+.++++.+.++++|++.-.. |-.+|||.
T Consensus 126 --l~~~gGW~n~~~v~~F~~YA~~v~~~fgd~Vk~--W~T~NEP~ 166 (464)
T d1gnxa_ 126 --LENAGGWPERATAERFAEYAAIAADALGDRVKT--WTTLNEPW 166 (464)
T ss_dssp --HHHTTCTTSTHHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred --HhhhCCCCCHHHHHHHHHHHHHHHHHhccccce--eEEccCch
Confidence 01123465 788999999999999999986443 66899996
|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.19 E-value=3.6e-10 Score=114.62 Aligned_cols=147 Identities=16% Similarity=0.256 Sum_probs=102.6
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC---------------------------CCCCccchHHHHHHHH
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP---------------------------PKPFVGGSSKVLDNAF 204 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~---------------------------~~~~~~~~l~~ld~~v 204 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+. |.+ .+++++..++..+++|
T Consensus 58 d~y~~y--~eDi~l~~~lG~~~yRfSI~WsRI~-P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~gl~~Y~~~i 134 (489)
T d1uwsa_ 58 GYWGNY--KTFHDNAQKMGLKIARLNVEWSRIF-PNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIF 134 (489)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHHC-CSCCCCC--CCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred hHHHhH--HHHHHHHHHcCCCEEEecccHHhcC-cCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 367666 8999999999999999999986554 332 1345667999999999
Q ss_pred HHHHHcCCEEEEEcCCCCCCCCCCC----CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC---
Q 013777 205 DWAEKYGVKVIVDLHAAPGSQNGNE----HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--- 276 (436)
Q Consensus 205 ~~a~~~Gi~VilDlH~~pg~qng~~----~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~--- 276 (436)
+.|.++||.+||+||+..--+.-.+ ..+.......|. +...+.++++.+.++++|++.-.. |-.+|||..
T Consensus 135 d~l~~~GIeP~VTL~H~dlP~~L~d~~~~~~~~f~~~GGW~n~~~v~~F~~YA~~v~~~fgdrVk~--WiTiNEP~~~~~ 212 (489)
T d1uwsa_ 135 KDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLVDE--YSTMNEPNVVGG 212 (489)
T ss_dssp HHHHHTTCEEEEESCSSCCBTTTBCHHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTTTCSE--EEEEECHHHHHH
T ss_pred HHHHHcCCccEEEEcCCCCcHHHHhhhhccccccccCCCcCCHHHHHHHHHHHHHHHHHhcCcceE--EEeeCCCcEEee
Confidence 9999999999999998642211000 000001123576 789999999999999999986443 568999962
Q ss_pred -----------CC-CCh-------hHHHHHHHHHHHHHHhhCCCeE
Q 013777 277 -----------PG-VAL-------DTLKSYYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 277 -----------~~-~~~-------~~~~~~~~~~~~aIR~~~p~~~ 303 (436)
+. .+. ..+.....++++++|+..+..+
T Consensus 213 ~gy~g~~~~~pp~~~~~~~~~~~~hn~l~Aha~a~~~~~~~~~~~i 258 (489)
T d1uwsa_ 213 LGYVGVKSGFPPGYLSFELSRRAMYNIIQAHARAYDGIKSVSKKPV 258 (489)
T ss_dssp HHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCE
T ss_pred cccccccCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 01 111 1233345567788888876544
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=99.17 E-value=8.4e-11 Score=112.48 Aligned_cols=121 Identities=21% Similarity=0.296 Sum_probs=87.5
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecC-ccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCC----
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPV-GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN---- 226 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv-~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qn---- 226 (436)
+||+.-.-++||+.||++|+|+||+++ .|- ...|.+ +.+ .++.+|++|+.|+++||+|||.||+....+.
T Consensus 9 ~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~-~iep~~-G~~---~~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~~~~ 83 (393)
T d1kwga2 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWA-LLEPEP-GRL---EWGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDR 83 (393)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEECTTCHH-HHCSBT-TBC---CCHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEecccchh-hcCCCC-Ccc---CHHHHHHHHHHHHHCCCEEEEEcCCCCCchhhhcc
Confidence 355432238999999999999999997 664 445653 455 3689999999999999999999997632110
Q ss_pred -----CCCCCCCCCC-----CCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC
Q 013777 227 -----GNEHSATRDG-----FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 277 (436)
Q Consensus 227 -----g~~~sg~~~~-----~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~ 277 (436)
..+..|.... ...+. +..++.+.++++.++.+|++++.+..+++.|||...
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~ 145 (393)
T d1kwga2 84 YPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCH 145 (393)
T ss_dssp CGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTT
T ss_pred CcccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeeccccccc
Confidence 0011111111 01111 678888999999999999999999999999999863
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=99.13 E-value=3e-10 Score=115.29 Aligned_cols=113 Identities=16% Similarity=0.249 Sum_probs=88.9
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||..| ++|++.|+++|+|+.|+.|.|-.+. |.. ++++++..++..+++|+.|+++||.+||+||+..--+. .
T Consensus 64 d~y~ry--~eDi~l~~~lG~~~yRfSisWsRI~-P~g~~~g~~n~~gl~~Y~~~id~l~~~GI~P~vTL~Hfd~P~~--l 138 (484)
T d1v02a_ 64 DSYHMY--AEDVRLLKEMGMDAYRFSISWPRIL-PKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQA--L 138 (484)
T ss_dssp CHHHHH--HHHHHHHHHTTCSEEEEECCHHHHS-TTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH--H
T ss_pred chhhhh--HHHHHHHHHhCCCEEEccCCHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEecCCcccce--e
Confidence 577776 8999999999999999999997654 432 35788889999999999999999999999998632110 0
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
.+....|. +...+.++++.+.++++|++.-.. |-.+|||.
T Consensus 139 ----~~~~Ggw~n~~~~~~F~~Ya~~v~~~fgd~V~~--W~T~NEP~ 179 (484)
T d1v02a_ 139 ----VDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKN--WLTFNEPE 179 (484)
T ss_dssp ----HHHHCGGGSTHHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred ----eeecCcccCHHHHHHHHHhhHHHHHHhcchhhc--eEEecCcc
Confidence 00112354 688999999999999999986443 56899995
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=99.11 E-value=4e-09 Score=106.60 Aligned_cols=268 Identities=15% Similarity=0.238 Sum_probs=156.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCC------------C-----------------CCccchHHHHHH
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP------------K-----------------PFVGGSSKVLDN 202 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~------------~-----------------~~~~~~l~~ld~ 202 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.++ |.+. + ..++..++..++
T Consensus 57 d~y~~y--~eDi~l~~~lG~~~yRfSi~WsRi~-P~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~gv~~Y~~ 133 (481)
T d1qvba_ 57 GYWNLN--QNDHDLAEKLGVNTIRVGVEWSRIF-PKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVE 133 (481)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHHC-SSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHH
T ss_pred chhhcc--HHHHHHHHHcCCCEEEccCcHHhcC-cCCCCcccccccccccccccccccccchhhhccccCCHHHHHHHHH
Confidence 467766 9999999999999999999987554 3221 1 124568999999
Q ss_pred HHHHHHHcCCEEEEEcCCCCCCCCCCCC-----CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 203 AFDWAEKYGVKVIVDLHAAPGSQNGNEH-----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 203 ~v~~a~~~Gi~VilDlH~~pg~qng~~~-----sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
+|+.|.++||.+||+||+..--|.=.+. .|.......|. +...+.+.++.+.++++|++.-.. |-.+|||..
T Consensus 134 ~i~~l~~~GI~P~VTL~H~dlP~~L~d~~~~~~~g~~~~~GGW~n~~~v~~F~~YA~~v~~~fgdrVk~--WiTiNEP~~ 211 (481)
T d1qvba_ 134 MYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGELPVM--WSTMNEPNV 211 (481)
T ss_dssp HHHHHHTTTCEEEEESCCSCCBTTTBCHHHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTTSCSE--EEEEECHHH
T ss_pred HHHHHHHhCCeeEEEEecCCCcHHHhhhhhcccccccccCCCccCHHHHHHHHHHHHHHHHHhcchhhe--eEecCCCcE
Confidence 9999999999999999986422210000 00000123466 788999999999999999986443 668999952
Q ss_pred --------------CCC-Chh-------HHHHHHHHHHHHHHhhCCCeE-EEEeCCCC-----CCCh-hh--------hh
Q 013777 277 --------------PGV-ALD-------TLKSYYKAGYDAVRKYTSTAY-VIMSNRLG-----PADH-KE--------LL 319 (436)
Q Consensus 277 --------------~~~-~~~-------~~~~~~~~~~~aIR~~~p~~~-Viv~~~~~-----~~~~-~~--------~~ 319 (436)
|+. +.. .+.....+++++||+..+..+ +++...+. +.+. .. +.
T Consensus 212 ~~~~gy~~~~G~~~Pg~~~~~~~~~a~~~~l~AHa~A~~~~~~~~~~~igi~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 291 (481)
T d1qvba_ 212 VYEQGYMFVKGGFPPGYLSLEAADKARRNMIQAHARAYDNIKRFSKKPVGLIYAFQWFELLEGPAEVFDKFKSSKLYYFT 291 (481)
T ss_dssp HHHHHHTCGGGCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEECCEEECSSSCCSHHHHHHHHHTSTTT
T ss_pred EEeeccccccccCCCCccchhhHhHHHHHHHHHHHHHHHHHhhcccCccceEEecccccccCCcHHHHHHHHHHhccccc
Confidence 111 111 123345567788888876542 22332111 1110 00 00
Q ss_pred cc--------------CCCCCcEEEEEeecCcCC----C-------CC---------C-------CCCh---hhhHHHHH
Q 013777 320 SF--------------ASGLSRVVIDVHYYNLFS----N-------NF---------N-------GLNV---QQNIDYVN 355 (436)
Q Consensus 320 ~~--------------~~~~~nvv~~~H~Y~~~~----~-------~~---------~-------~~~~---~~~i~~i~ 355 (436)
+. .....-..+.+-+|...- . .+ . .+.. .+-+..+
T Consensus 292 d~~~~g~~~~~~~~~~~i~~~~DfiGiNyYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl~~~- 370 (481)
T d1qvba_ 292 DIVSKGSSIINVEYRRDLANRLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVYPEGLYLL- 370 (481)
T ss_dssp THHHHSCCSSCCCCCTTTSSCCSEEEEECCCEEEEECCTTCCEECTTSGGGSCTTCBCTTSCBBCTTCCBCCTHHHHHH-
T ss_pred chhhcCCcccCHHHHHHhhccCCccccccccceEEeccCCCccccccccccccCCCcCCCCCCCCccccccCcHHHHHH-
Confidence 00 001123456666664310 0 00 0 0000 1111111
Q ss_pred HhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHHHHHHHHcc--CCCcEEEEceecCCCCCChHHHHhCCC
Q 013777 356 NQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGY 432 (436)
Q Consensus 356 ~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~~~~Ws~~~~~~~g~ 432 (436)
+..+.+..++|++|.|.|..-..+....+.+++++.+.+++.++ .-.|+++|++-. +-.|..-...+-|+
T Consensus 371 ------L~~~~~~Y~~Pi~ITENG~~~~~D~~Ri~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~D-n~EW~~Gy~~RfGL 442 (481)
T d1qvba_ 371 ------LKELYNRYGVDLIVTENGVSDSRDALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTD-NYEWAQGFRQKFGL 442 (481)
T ss_dssp ------HHHHHHHHCCEEEEEECCCCCTTCSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBC-CCCGGGTTSSCCCS
T ss_pred ------HHHHHHhcCCCEEEECCCCCcccChHHHHHHHHHHHHHHHHHHCCCCEEEEeeccchh-hhChhhcccccCce
Confidence 22222222567999999986443333456678888888777764 467999999977 44555433344454
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=99.10 E-value=6.5e-11 Score=115.45 Aligned_cols=143 Identities=18% Similarity=0.156 Sum_probs=97.8
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+++|+.||++|||+||+++.| ...+|.+ +.|+-..+..|+++|+.|+++||+|||.+...... .+..+ +.+.
T Consensus 39 ~~~l~~mk~~G~n~vr~~~~W-~~~ep~~-g~~df~~~~~l~~~l~~a~~~Gl~vil~~g~~~~~---~w~~~---~~p~ 110 (354)
T d1tg7a5 39 IDIFEKVKALGFNCVSFYVDW-ALLEGNP-GHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINA---EVSGG---GFPG 110 (354)
T ss_dssp HHHHHHHHTTTCCEEEEECCH-HHHCSBT-TBCCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCT---TBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEecch-hccCCCC-CcccccchhhHHHHHHHHHHcCCEEEEcCCCCcCc---ccccC---CCCc
Confidence 789999999999999999984 4556654 46766678889999999999999999987532211 01000 1111
Q ss_pred CC-----------hhHHHHHHHHHHHHHHH-----hCCCCceeEEEeecCCCCCC--CChhHHHHHHHHHHHHHHhhCCC
Q 013777 240 WG-----------DSNVADTVAVIDFLAAR-----YANRPSLAAIELINEPLAPG--VALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 240 w~-----------~~~~~~~~~~~~~lA~r-----y~~~~~v~g~eL~NEP~~~~--~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
|. +...+...+.++.|+++ |+++|.|++|+|-||..... ......+.+.+.+.+..|+.+..
T Consensus 111 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (354)
T d1tg7a5 111 WLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIV 190 (354)
T ss_dssp GGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCcccCCCHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeccccCccccccccchHHHHHHHHHhhhhccCcc
Confidence 11 34555566666666654 68999999999999986421 12223456777777778888877
Q ss_pred eEEEEeCCC
Q 013777 302 AYVIMSNRL 310 (436)
Q Consensus 302 ~~Viv~~~~ 310 (436)
.+++..+.+
T Consensus 191 ~p~~~~~~~ 199 (354)
T d1tg7a5 191 VPFISNDAW 199 (354)
T ss_dssp SCBBCCBSS
T ss_pred cceEeccch
Confidence 666555443
|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.05 E-value=3.5e-10 Score=112.79 Aligned_cols=111 Identities=21% Similarity=0.320 Sum_probs=86.4
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 231 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~s 231 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+ .|.+ +++++..++..+++|+.|+++||.+||+||+..--+.
T Consensus 47 d~y~ry--~eDi~ll~~lG~~~yRfSisWsRI-~P~~-g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~d~P~~----- 117 (423)
T d1vffa1 47 NHWELY--RDDIQLMTSLGYNAYRFSIEWSRL-FPEE-NKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLW----- 117 (423)
T ss_dssp CHHHHH--HHHHHHHHHHTCCEEEEECCHHHH-CSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH-----
T ss_pred chHHhh--HHHHHHHHHhCCCEEEecCcHHHe-ecCC-CccChHHHHHHHHHHHHHHhcCCeeEEeecCCcchHH-----
Confidence 467666 899999999999999999998655 4544 5778889999999999999999999999998532110
Q ss_pred CCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 013777 232 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 276 (436)
Q Consensus 232 g~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~ 276 (436)
......|. +...+.+.++.+.+++++ + .|--|-.+|||..
T Consensus 118 --l~~~gGw~~~~~v~~F~~Ya~~~~~~~-d--~Vk~W~T~NEP~~ 158 (423)
T d1vffa1 118 --FMKKGGFLREENLKHWEKYIEKVAELL-E--KVKLVATFNEPMV 158 (423)
T ss_dssp --HHHTTGGGSGGGHHHHHHHHHHHHHHT-T--TCCEEEEEECHHH
T ss_pred --HHhhhhccCHHHHHHHHHHHHHHHHhh-c--ccceeeccCCcce
Confidence 00112354 688899999999888766 3 3545779999974
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=98.98 E-value=1e-08 Score=97.21 Aligned_cols=214 Identities=14% Similarity=0.155 Sum_probs=126.8
Q ss_pred CCEEEecCc-cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEE---EcCCCCCCCCCCCCCCCCCCCCCCC-hhHH
Q 013777 171 INAVRIPVG-WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSATRDGFQEWG-DSNV 245 (436)
Q Consensus 171 ~N~VRipv~-~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vil---DlH~~pg~qng~~~sg~~~~~~~w~-~~~~ 245 (436)
||.+-..-. -|...+|.++ .| .++.+|++|++|+++||+|.- =.|. +.+ .....+. +...
T Consensus 37 fn~~t~~n~~kW~~~ep~~G-~~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~----~~p-------~w~~~~~~~~~~ 101 (302)
T d1nq6a_ 37 FGSVTPENEMKWDAVESSRN-SF---SFSAADRIVSHAQSKGMKVRGHTLVWHS----QLP-------GWVSPLAATDLR 101 (302)
T ss_dssp CSEEEESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEEEST----TCC-------TTTTTSCHHHHH
T ss_pred CCeeeeccCccchhhcCCCC-cC---CcHHHHHHHHHHHHCCCEEEeecccccc----ccc-------ccccccchHHHH
Confidence 888886532 2444566543 33 478899999999999999852 1221 111 1111233 4566
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChhHH-----HHHHHHHHHHHHhhCCCeEEEEeCC-CCCCCh
Q 013777 246 ADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRKYTSTAYVIMSNR-LGPADH 315 (436)
Q Consensus 246 ~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~~~p~~~Viv~~~-~~~~~~ 315 (436)
+.+.++++.+++||++. |..||++|||..... ....+ ..+++.+++++|+++|+..+++.+. ......
T Consensus 102 ~~~~~~i~~v~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~g~~~~~~a~~~ar~~dP~a~l~~nd~~~~~~~~ 179 (302)
T d1nq6a_ 102 SAMNNHITQVMTHYKGK--IHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKLCYNDYNTDGQNA 179 (302)
T ss_dssp HHHHHHHHHHHHHTTTS--CSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCSSSSH
T ss_pred HHHHHHHHHHHHHcCCC--cceEEEeccccccCCCCccCCChhhhhccHHHHHHHHHHHHHhCCCCceeecccccccCch
Confidence 77889999999999985 788999999964321 11112 2478999999999999999988742 111111
Q ss_pred ---------hhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCC
Q 013777 316 ---------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD 386 (436)
Q Consensus 316 ---------~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~ 386 (436)
..+.......+.+.+..|.+.... +++. +.. .+..+.. .+.||+|+|++....
T Consensus 180 ~~~~~~~~i~~l~~~~~~id~iG~q~H~~~~~~------~~~~-~~~-------~l~~~~~-~g~pi~iTE~d~~~~--- 241 (302)
T d1nq6a_ 180 KSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNSP------VPSD-FQA-------NLQRFAD-LGVDVQITELDIEGS--- 241 (302)
T ss_dssp HHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTT-HHH-------HHHHHHT-TTCEEEEEEEEECCC---
T ss_pred hhHHHHHHHHHHHhccCCcceeEEEeccCCCCC------ChHH-HHH-------HHHHHHh-cCCceEEecCCCCCC---
Confidence 111222245677888888775321 1121 111 1222223 366799999986442
Q ss_pred cCHHHHHHHHHHHHHH-HccC-CCcEEEEceecCCCCC
Q 013777 387 ASKQDYQRFANAQLDV-YGRA-TFGWAYWAHKCEANHW 422 (436)
Q Consensus 387 ~~~~~~~~~~~~q~~~-~~~~-~~Gw~~W~~k~~~~~W 422 (436)
.+...++++..+.+ ++.. ..|-++|.+.. +.+|
T Consensus 242 --~~~Qa~~~~~~~~~~~~~p~v~~i~~W~~~D-~~sw 276 (302)
T d1nq6a_ 242 --GSAQAANYTKVVNACLAVTRCTGITVWGVTD-KYSW 276 (302)
T ss_dssp --HHHHHHHHHHHHHHHHTSTTEEEEEESCSCG-GGCT
T ss_pred --cHHHHHHHHHHHHHHHccCCceEEEEeCCcc-CCCc
Confidence 23344454444443 3323 34788998754 3345
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=98.94 E-value=7.1e-09 Score=98.81 Aligned_cols=224 Identities=16% Similarity=0.156 Sum_probs=129.9
Q ss_pred hCCCCEEEecCc-cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-hhHH
Q 013777 168 SNGINAVRIPVG-WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNV 245 (436)
Q Consensus 168 ~~G~N~VRipv~-~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~-~~~~ 245 (436)
..-||.+..--. -|...+|.++ .| .++.+|++|++|+++||.|+- |... +++..++....+. +...
T Consensus 34 ~~~fn~~t~~n~~kW~~iep~~g-~~---~~~~~D~~v~~a~~~gl~v~g--h~lv------w~~~~p~~~~~~~~~~~~ 101 (312)
T d1fh9a_ 34 DSEFNLVVAENAMKWDATEPSQN-SF---SFGAGDRVASYAADTGKELYG--HTLV------WHSQLPDWAKNLNGSAFE 101 (312)
T ss_dssp HHHCSEEEESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEE--EEEE------ESSSCCHHHHTCCHHHHH
T ss_pred HHhCCcccccccCcchhhcCCCC-cC---CcHHHHHHHHHHHHCCCEEEE--eccc------ccccccccccccchHHHH
Confidence 335787765321 2444555442 33 468899999999999999863 3221 1111011111122 4455
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChhHH----HHHHHHHHHHHHhhCCCeEEEEeCCCCCC-C--
Q 013777 246 ADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL----KSYYKAGYDAVRKYTSTAYVIMSNRLGPA-D-- 314 (436)
Q Consensus 246 ~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~----~~~~~----~~~~~~~~~aIR~~~p~~~Viv~~~~~~~-~-- 314 (436)
+.+.++++.+++||++. |..||++|||..... ..... ..|++.+++++|+.+|+..+++.+..... .
T Consensus 102 ~~~~~~i~~v~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~lg~~~i~~a~~~ar~~dP~a~l~~n~~~~~~~~~~ 179 (312)
T d1fh9a_ 102 SAMVNHVTKVADHFEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDYNVEGINAK 179 (312)
T ss_dssp HHHHHHHHHHHHHTTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEEEEEESSCSSSSHH
T ss_pred HHHHHHHHHHHHhcCCC--ceEEEEecccccCCCCCcCCchHHHhhhHHHHHHHHHHHHhhCCCceEEeecCcccccchh
Confidence 66778999999999974 788999999975321 11111 25789999999999999999887421111 1
Q ss_pred hhhh-------hccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCC--
Q 013777 315 HKEL-------LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-- 385 (436)
Q Consensus 315 ~~~~-------~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~-- 385 (436)
...+ .......+.+.+..|.+.... ..+ +.. .+..+... +.||+|+|++......
T Consensus 180 ~~~~~~~i~~l~~~g~~id~ig~q~H~~~~~~-------~~~-~~~-------~l~~~~~~-g~pi~iTE~d~~~~~~~~ 243 (312)
T d1fh9a_ 180 SNSLYDLVKDFKARGVPLDCVGFQSHLIVGQV-------PGD-FRQ-------NLQRFADL-GVDVRITELDIRMRTPSD 243 (312)
T ss_dssp HHHHHHHHHHHHHHTCCCCEEEECCEEETTCC-------CTT-HHH-------HHHHHHTT-TCEEEEEEEEEEEESSCC
T ss_pred HHHHHHHHHHHHhCCCCccceeEeecccccCc-------HHH-HHH-------HHHHHHhc-CCceEEeccccccCCCCC
Confidence 1111 112234677888899875421 111 111 12222223 5569999998643211
Q ss_pred CcCHHHHHHHHHHHHHHHccC--CCcEEEEceecCCCCC
Q 013777 386 DASKQDYQRFANAQLDVYGRA--TFGWAYWAHKCEANHW 422 (436)
Q Consensus 386 ~~~~~~~~~~~~~q~~~~~~~--~~Gw~~W~~k~~~~~W 422 (436)
..+.+...++++..+.++-+. ..|.++|.+.. ..+|
T Consensus 244 ~~~~~~QA~~~~~~~~~~~~~~~v~~v~~W~~~D-~~~W 281 (312)
T d1fh9a_ 244 ATKLATQAADYKKVVQACMQVTRCQGVTVWGITD-KYSW 281 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBT-TTCS
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCccEEEEeCCcc-CCcc
Confidence 112233456666666554433 23788998864 4455
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.90 E-value=7.2e-09 Score=99.02 Aligned_cols=121 Identities=19% Similarity=0.225 Sum_probs=87.5
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+ |.. +. + +.+++.|.++||+|+.++...+..+.. ..+ ......
T Consensus 42 ~~~l~~~k~~G~N~iR~----~~~--~~---~---------~~f~d~~D~~Gi~V~~e~~~~~~w~~~--~~~-~~~~~~ 100 (339)
T d2vzsa5 42 ADKLKYVLNLGLNTVRL----EGH--IE---P---------DEFFDIADDLGVLTMPGWECCDKWEGQ--VNG-EEKGEP 100 (339)
T ss_dssp HHHHHHHHHTTCCEEEE----ESC--CC---C---------HHHHHHHHHHTCEEEEECCSSSGGGTT--TST-TSSSCC
T ss_pred HHHHHHHHHcCCCEEEe----cCC--CC---C---------HHHHHHHHHCCCeEecccccCcccccc--CCc-ccccCC
Confidence 68999999999999998 221 11 1 457788999999999997754432110 011 011122
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
+.+...+.+.+.++.+++|++++|+|++|.+.||+... ..+.+.+.+.+|+.||.++++...
T Consensus 101 ~~p~~~~~~~~~~~~~v~r~rnHPsvi~W~~gNE~~~~-------~~~~~~~~~~~~~~D~~r~~~~~s 162 (339)
T d2vzsa5 101 WVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPD-------RRIEQGYLDAMKAADFLLPVIPAA 162 (339)
T ss_dssp CCTTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCCC-------HHHHHHHHHHHHHTTCCSCEESCS
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEecCcCCCch-------HHHHHHHHHHHHHhCCCceeEecC
Confidence 33567788899999999999999999999999998642 245566678899999998876553
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=98.89 E-value=9.3e-09 Score=96.57 Aligned_cols=115 Identities=17% Similarity=0.144 Sum_probs=85.6
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+.- .| + -+.++++|.++||.||.++-..-.+ . ......
T Consensus 40 ~~di~l~k~~G~N~iR~~~------~p--~----------~~~~~~~~D~~Gilv~~e~~~~~~~-------~-~~~~~~ 93 (292)
T d1jz8a5 40 VQDILLMKQNNFNAVRCSH------YP--N----------HPLWYTLCDRYGLYVVDEANIETHG-------M-VPMNRL 93 (292)
T ss_dssp HHHHHHHHHTTCCEEECTT------SC--C----------CHHHHHHHHHHTCEEEEECSCBCTT-------S-SSTTTT
T ss_pred HHHHHHHHhcCCCEEEecC------CC--C----------hHHHHHHHhhcCCeEEeeeeecccC-------C-cccCCC
Confidence 6899999999999999832 11 1 1357889999999999997432110 0 000011
Q ss_pred C-ChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 240 W-GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 240 w-~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
. .+...+.+.+.++.+.+|++++|+|++|.+.||+... ...+.+.+.||+.+|++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~v~r~~nHPSvi~W~~~NE~~~~--------~~~~~~~~~~~~~d~~r~~~~~~ 155 (292)
T d1jz8a5 94 TDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEG 155 (292)
T ss_dssp TTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred CCCHHHHHHHHHHHHHHHHHccCCCcHHHhcccccCCcc--------hhhHHHHHHHHHHhhcCcccccc
Confidence 1 1567888899999999999999999999999999731 35566778899999999987764
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=98.89 E-value=1.3e-09 Score=109.79 Aligned_cols=112 Identities=15% Similarity=0.191 Sum_probs=89.4
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 230 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~-~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~ 230 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+. |+. .+.+++..++..+++|+.|+++||.+||+||+..--+.
T Consensus 54 d~y~ry--~eDi~l~~~lG~~~yRfSi~WsRI~-P~G~~g~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hfd~P~~---- 126 (462)
T d1wcga1 54 DSYHKY--KEDVAIIKDLNLKFYRFSISWARIA-PSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQY---- 126 (462)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHHS-TTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH----
T ss_pred chhhhh--HHHHHHHHHhCCCEEEeeCcHHHcc-cCCCCCCcCHHHHHHHHHHHHHHHhcCCeeEEEeccccchhh----
Confidence 577777 8999999999999999999987554 442 35677889999999999999999999999998642110
Q ss_pred CCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 231 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 231 sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
......|. +...+.+.++.+.++++|++.-.. |-.+|||.
T Consensus 127 ---l~~~GGW~~~~~v~~F~~Ya~~v~~~fgd~V~~--W~T~NEP~ 167 (462)
T d1wcga1 127 ---LQDLGGWVNPIMSDYFKEYARVLFTYFGDRVKW--WITFNEPI 167 (462)
T ss_dssp ---HHHTTGGGSTTHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred ---hhhcCCcccHHHHHHHHHHHHHHHHhccccchh--eeeecCCc
Confidence 00122455 688999999999999999986443 56899996
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=98.80 E-value=4.7e-08 Score=93.37 Aligned_cols=223 Identities=13% Similarity=0.163 Sum_probs=126.8
Q ss_pred CCCEEEec--CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCC-CCCCCCCCCCCCCCCCCCC-hhHH
Q 013777 170 GINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEHSATRDGFQEWG-DSNV 245 (436)
Q Consensus 170 G~N~VRip--v~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~p-g~qng~~~sg~~~~~~~w~-~~~~ 245 (436)
=||.+=.. +- |...+|.++ .| .++.+|++|++|+++||+|+- |... +++.+.+.. ..... +...
T Consensus 38 ~fn~~t~~n~~k-W~~iEp~~G-~~---~~~~~D~~v~~a~~~gi~v~g--h~l~W~~~~p~~~~-----~~~~~~~~~~ 105 (324)
T d1vbua1 38 EFNILTPENQMK-WDTIHPERD-RY---NFTPAEKHVEFAEENDMIVHG--HTLVWHNQLPGWIT-----GREWTKEELL 105 (324)
T ss_dssp HCSEEEESSTTS-HHHHCCBTT-EE---ECHHHHHHHHHHHHTTCEEEE--EEEECSSSCCHHHH-----TSCCCHHHHH
T ss_pred hcCccccccCCc-hHHhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--ecCcccccCCcccc-----ccccchHHHH
Confidence 48888655 33 444566543 33 478899999999999999863 3211 111111100 00112 4556
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC---hhH----HHHHHHHHHHHHHhhCCCeEEEEeCCCCCC-Ch--
Q 013777 246 ADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA---LDT----LKSYYKAGYDAVRKYTSTAYVIMSNRLGPA-DH-- 315 (436)
Q Consensus 246 ~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~---~~~----~~~~~~~~~~aIR~~~p~~~Viv~~~~~~~-~~-- 315 (436)
+.+.++++.+++||++. |..||++|||...... ... ...+++.+++++|+.+|+..|++.+..... ..
T Consensus 106 ~~~~~~i~~v~~ry~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~a~~~ar~~dP~a~l~~n~~~~~~~~~~~ 183 (324)
T d1vbua1 106 NVLEDHIKTVVSHFKGR--VKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWAKEADPDAILIYNDYSIEEINAKS 183 (324)
T ss_dssp HHHHHHHHHHHHHTTTT--CCEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEEEEESSCSSSSHHH
T ss_pred HHHHHHHHHHHHhcCCC--ceEEEEecccccCCCCccCChHHHHhHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCcHhH
Confidence 77889999999999974 5669999999643211 111 136789999999999999988887422111 11
Q ss_pred hhh-------hccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCC--
Q 013777 316 KEL-------LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD-- 386 (436)
Q Consensus 316 ~~~-------~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~-- 386 (436)
..+ .......+.+.+..|.+.. ..+.+ .+.. .+..+.. .+.||+|+|++.......
T Consensus 184 ~~~~~~v~~l~~~~~~id~iG~q~h~~~~------~~~~~----~~~~----~l~~~~~-~g~pi~iTE~~~~~~~~~~~ 248 (324)
T d1vbua1 184 NFVYNMIKELKEKGVPVDGIGFQMHIDYR------GLNYD----SFRR----NLERFAK-LGLQIYITEMDVRIPLSGSE 248 (324)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETT------CCCHH----HHHH----HHHHHHT-TTCEEEEEEEEEEEESSSCH
T ss_pred HHHHHHHHHHHhCCCCcceeEeeeccCcC------CCCHH----HHHH----HHHHHHh-cCCceeeeeceeccCCCCCC
Confidence 111 1112345566666665532 12222 2221 2223333 356799999986432211
Q ss_pred -cCHHHHHHHHHHHHHHHcc--CCCcEEEEceecCCCCC
Q 013777 387 -ASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHW 422 (436)
Q Consensus 387 -~~~~~~~~~~~~q~~~~~~--~~~Gw~~W~~k~~~~~W 422 (436)
.+.+...+++...+.++-+ ...|-++|.+.. ..+|
T Consensus 249 ~~~~~~QA~~~~~~~~~~~~~p~v~gi~~W~~~D-~~~w 286 (324)
T d1vbua1 249 EYYLKKQAEVCAKIFDICLDNPAVKAIQFWGFTD-KYSW 286 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBT-TSCS
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCeEEEEEecccc-CCcc
Confidence 1223445566555544433 335778998865 3445
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=98.75 E-value=6.1e-09 Score=105.52 Aligned_cols=113 Identities=18% Similarity=0.245 Sum_probs=88.2
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||+.| ++|++.||++|+|+.|+.|.|-.+. |.. .+++++..++..+++|+.|+++||.+||+||+..--+ +
T Consensus 70 d~y~~y--~eDi~l~~~lG~~~yRfSi~WsRI~-P~g~~~g~~n~~gl~~Y~~~i~~l~~~GIeP~vTL~HfdlP~---~ 143 (490)
T d1cbga_ 70 DEYHRY--KEDIGIMKDMNLDAYRFSISWPRVL-PKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQ---A 143 (490)
T ss_dssp CHHHHH--HHHHHHHHHTTCCEEEEECCHHHHS-TTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBH---H
T ss_pred chhhhh--HHHHHHHHHcCCCEEEccCCHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeecCCChH---H
Confidence 577777 9999999999999999999987554 432 3567788999999999999999999999999863211 0
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
- .+....|. ++..+.++++.+.++++|++.-.. |-.+|||.
T Consensus 144 l---~~~~Ggw~n~~~~~~F~~Ya~~v~~~fgd~V~~--W~T~NEP~ 185 (490)
T d1cbga_ 144 L---EDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKH--WITLNEPW 185 (490)
T ss_dssp H---HHHHCGGGSTTHHHHHHHHHHHHHHHHTTTCCE--EEEEECHH
T ss_pred H---hhcccccCCHHHHHHHHHHHHHHHHHhcCccce--EEEccCCc
Confidence 0 00012343 688999999999999999986443 56899995
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=98.73 E-value=3.7e-08 Score=92.85 Aligned_cols=118 Identities=22% Similarity=0.164 Sum_probs=85.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
+.||+.||++|+|+||+.- .| +. ++++++|.+.||.|+.++-..-. +....+.. ....
T Consensus 39 ~~di~l~k~~G~N~iR~~h------~p--~~----------~~~~d~cD~~Gilv~~e~~~~~~---~~~~~~~~-~~~~ 96 (297)
T d1yq2a5 39 REDLALMKRFNVNAIRTSH------YP--PH----------PRLLDLADEMGFWVILECDLETH---GFEAGGWV-ENPS 96 (297)
T ss_dssp HHHHHHHHHTTCCEEEETT------SC--CC----------HHHHHHHHHHTCEEEEECSCBCG---GGTTTTTT-TCGG
T ss_pred HHHHHHHHHCCCCEEEccC------CC--Ch----------HHHHHHHHhcCCEEEEeeccccc---cccccCcc-CCcc
Confidence 6899999999999999832 11 11 36788999999999998643211 00000000 0000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
-.+...+.+.+.++.+..|++++|+|+.|.+.||+.. ....+++.+.+|+.+|++++...
T Consensus 97 ~~~~~~~~~~~~~~emV~r~~NHPSIi~W~~gNE~~~--------~~~~~~~~~~~k~~D~tRp~~~~ 156 (297)
T d1yq2a5 97 DVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGT--------GSNLAAMAAWAHARDSSRPVHYE 156 (297)
T ss_dssp GCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCC--------CHHHHHHHHHHHHHCTTSCEECT
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCceEeecccccCCc--------hHHHHHHHHHHHHhccCCccccc
Confidence 0146678888999999999999999999999999873 23566788999999999998754
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=98.73 E-value=9.7e-08 Score=90.72 Aligned_cols=230 Identities=12% Similarity=0.128 Sum_probs=126.2
Q ss_pred hCCCCEEEecC--ccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-hhH
Q 013777 168 SNGINAVRIPV--GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSN 244 (436)
Q Consensus 168 ~~G~N~VRipv--~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~-~~~ 244 (436)
..-||.+= |- ..|...+|.+ +.| .++.+|++|++|+++||.|..-+-..+. +.+.+.. ...+. +..
T Consensus 35 ~~~fn~~t-~~n~~kW~~iep~~-G~~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~-~~p~w~~-----~~~~~~~~~ 103 (320)
T d1xyza_ 35 QREFSMVV-CENEMKFDALQPRQ-NVF---DFSKGDQLLAFAERNGMQMRGHTLIWHN-QNPSWLT-----NGNWNRDSL 103 (320)
T ss_dssp HHHCSEEE-ESSTTSHHHHCSBT-TBC---CCHHHHHHHHHHHHTTCEEEEEEEECSS-SCCHHHH-----TSCCCHHHH
T ss_pred HHhCCeee-ecccCchHHhCCCC-Ccc---ChHHHHHHHHHHHHCCCEEEeeccccCC-CCCcchh-----ccccchHHH
Confidence 33478774 32 2344556654 344 3688999999999999998642211111 1110100 01122 455
Q ss_pred HHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC---ChhHH-----HHHHHHHHHHHHhhCCCeEEEEeCCCC-CCCh
Q 013777 245 VADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTL-----KSYYKAGYDAVRKYTSTAYVIMSNRLG-PADH 315 (436)
Q Consensus 245 ~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~---~~~~~-----~~~~~~~~~aIR~~~p~~~Viv~~~~~-~~~~ 315 (436)
.+.+.++++.+++||++. |..||+.|||..... ....+ ..++..+++++|+.+|+..+++.+... ....
T Consensus 104 ~~~~~~~i~~v~~ry~g~--i~~WeV~NEp~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~dp~a~l~~n~~~~~~~~~ 181 (320)
T d1xyza_ 104 LAVMKNHITTVMTHYKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLFYNDYNIEDLGP 181 (320)
T ss_dssp HHHHHHHHHHHHHHTTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCSSSSH
T ss_pred HHHHHHHHHHHHHHcCCC--ceeEEeecccccCCCccccCcHHhhhccHHHHHHHHHHHHHhccCcEEEeeccccccccH
Confidence 677889999999999985 778999999975321 11111 257899999999999999888874211 1111
Q ss_pred --hhhhcc-----CCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCC--
Q 013777 316 --KELLSF-----ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD-- 386 (436)
Q Consensus 316 --~~~~~~-----~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~-- 386 (436)
..++.. ....+-..+.+|.|.... ... ..+..+.. .+..+... +.|++|+|++.......
T Consensus 182 ~~~~~~~~~~~~~~~~~~id~iG~q~h~~~~-----~~~-~~~~~~~~----~l~~~~~~-g~pI~iTE~~~~~~~~~~~ 250 (320)
T d1xyza_ 182 KSNAVFNMIKSMKERGVPIDGVGFQCHFING-----MSP-EYLASIDQ----NIKRYAEI-GVIVSFTEIDIRIPQSENP 250 (320)
T ss_dssp HHHHHHHHHHHHHHTTCCCCEEEECCEEESS-----CCH-HHHHHHHH----HHHHHHHT-TCEEEEEEEEEEEETTSCH
T ss_pred HHHHHHHHHHHHHhCcCccceEEecccccCC-----CCc-hHHHHHHH----HHHHHHhc-CCceeeeccccccCCCCCc
Confidence 122111 122223344455443211 111 12222222 22333333 55699999985432111
Q ss_pred -cCHHHHHHHHHHHHHHHccC-C-CcEEEEceecCCCCC
Q 013777 387 -ASKQDYQRFANAQLDVYGRA-T-FGWAYWAHKCEANHW 422 (436)
Q Consensus 387 -~~~~~~~~~~~~q~~~~~~~-~-~Gw~~W~~k~~~~~W 422 (436)
.+.+...++++..+.++.+. . .|.++|.+.. ...|
T Consensus 251 ~~~~~~QA~~~~~~~~~~~~~p~v~gi~~W~~~D-~~~w 288 (320)
T d1xyza_ 251 ATAFQVQANNYKELMKICLANPNCNTFVMWGFTD-KYTW 288 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBT-TSCS
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCeeEEEEeeccc-CCcc
Confidence 12233456666666554433 3 4888998864 3444
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=98.72 E-value=9.9e-09 Score=104.20 Aligned_cols=113 Identities=14% Similarity=0.174 Sum_probs=89.1
Q ss_pred HhhhhcCCHHHHHHHHhCCCCEEEecCccccccCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 013777 152 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 229 (436)
Q Consensus 152 ~h~~~~ite~d~~~ia~~G~N~VRipv~~~~~~~~~~--~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~ 229 (436)
+||+.| ++|++.|+++|+|+.|+.|.|-.+. |.. .+++++..++..+++|+.|.++||.+||+||+..--+.
T Consensus 72 d~y~~y--~eDi~l~~~lG~~~yRfSI~WsRI~-P~g~~~~~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~HfdlP~~--- 145 (499)
T d1e4mm_ 72 DSFSYW--QKDIDVLDELNATGYRFSIAWSRII-PRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQT--- 145 (499)
T ss_dssp CHHHHH--HHHHHHHHHHTCSEEEEECCHHHHC-TTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHH---
T ss_pred chHHHH--HHHHHHHHHhCCCEEEccCCHHHcC-cCCCCCCCCCHHHHHHHHHHHHHHHHcCCcceEEEecCchHHH---
Confidence 577777 9999999999999999999987554 432 34577889999999999999999999999998642110
Q ss_pred CCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 013777 230 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 275 (436)
Q Consensus 230 ~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~ 275 (436)
- .+....|. +...+.++++.+.++++|++.-.. |-.+|||.
T Consensus 146 l---~~~~GGW~~~~~~~~F~~YA~~v~~~fgd~Vk~--W~T~NEP~ 187 (499)
T d1e4mm_ 146 L---QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKY--WLTINQLY 187 (499)
T ss_dssp H---HHHHCGGGSTHHHHHHHHHHHHHHHHHTTTCCE--EEEESCTT
T ss_pred H---HHhcccccCHHHHHHHHHHHHHHHHhhccccce--eEEccCce
Confidence 0 00112465 789999999999999999986443 55899997
|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
Probab=98.69 E-value=2.2e-07 Score=87.79 Aligned_cols=212 Identities=17% Similarity=0.256 Sum_probs=125.8
Q ss_pred CCEEEecCc--cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC------h
Q 013777 171 INAVRIPVG--WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG------D 242 (436)
Q Consensus 171 ~N~VRipv~--~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~------~ 242 (436)
||.+= |-+ -|...+|.++ .| .++.+|++|++|+++||.|.- |... +++. .+.|. +
T Consensus 37 fn~~t-~en~~kW~~iEp~~G-~~---~~~~~D~~v~~a~~~gl~v~g--H~lv------W~~~----~P~w~~~~~~~~ 99 (301)
T d1ta3b_ 37 FGVIT-PENSMKWDALEPSQG-NF---GWSGADYLVDYATQHNKKVRG--HTLV------WHSQ----LPSWVSSIGDAN 99 (301)
T ss_dssp CSEEE-ESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--EEEE------CSSS----CCHHHHTCCCHH
T ss_pred CCeec-ccccCcchhhCCCCC-cC---CcHHHHHHHHHHHHCCCEEEE--eccc------cCcc----CchhhhccccHH
Confidence 77765 332 1445566543 33 468899999999999998765 4221 1111 12221 3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC---Chh--H--HHHHHHHHHHHHHhhCCCeEEEEeC-C-CCCC
Q 013777 243 SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALD--T--LKSYYKAGYDAVRKYTSTAYVIMSN-R-LGPA 313 (436)
Q Consensus 243 ~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~---~~~--~--~~~~~~~~~~aIR~~~p~~~Viv~~-~-~~~~ 313 (436)
...+.+.++++.+++||++. |-.||++|||..... +.. . -..|+..+++++|+.+|+..+++.+ + ....
T Consensus 100 ~~~~~~~~~I~~v~~rY~g~--i~~WDVvNEp~~~~~~~~~~~~~~~~g~~~~~~af~~A~~~dP~a~l~~nd~~~~~~~ 177 (301)
T d1ta3b_ 100 TLRSVMTNHINEVVGRYKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKLYINDYNLDSAS 177 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESCCCCTT
T ss_pred HHHHHHHHHHHHHHHhcCCC--cceEEeecccccCCCCcccchhhhccchHHHHHHHHHHHHhCcCceeeeccccccccc
Confidence 44566789999999999874 778999999964221 111 1 1368999999999999999888874 1 1111
Q ss_pred Ch--hhh-------hccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCC
Q 013777 314 DH--KEL-------LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 384 (436)
Q Consensus 314 ~~--~~~-------~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~ 384 (436)
.. ..+ .......+.+.+..|+.... .+.++ +.. .+..+...+.|++.|+|+....
T Consensus 178 ~~~~~~~~~~v~~l~~~g~~idgIG~Q~H~~~~~------~~~~~-~~~-------~l~~~~~~g~~~i~iTE~dv~~-- 241 (301)
T d1ta3b_ 178 YAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSH------WSSTE-AAG-------ALSSLANTGVSEVAITELDIAG-- 241 (301)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTC------CCGGG-HHH-------HHHHHHTTCCSEEEEEEEEETT--
T ss_pred hHHHHHHHHHHHHHHhCCCCcceeeeeeecCCCC------CCHHH-HHH-------HHHHHHHcCCCcccccccccch--
Confidence 11 111 11123566777888865321 12222 111 2233344556779999997643
Q ss_pred CCcCHHHHHHHHHHHHHHHccCCCcEEEEceecCCCCC
Q 013777 385 KDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHW 422 (436)
Q Consensus 385 ~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~~~W 422 (436)
...+.+++++...+. .....|.++|.+.. +.+|
T Consensus 242 --~qa~~~~~~~~~~~~--~p~v~gi~~Wg~~D-~~~w 274 (301)
T d1ta3b_ 242 --AASSDYLNLLNACLN--EQKCVGITVWGVSD-KDSW 274 (301)
T ss_dssp --CCHHHHHHHHHHHHT--CTTEEEEEESCSBG-GGST
T ss_pred --HHHHHHHHHHHHHHc--ccCceEEEEcCCcc-CCCC
Confidence 234556666554332 22456888998875 3345
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=98.66 E-value=1.9e-07 Score=88.25 Aligned_cols=213 Identities=16% Similarity=0.229 Sum_probs=122.5
Q ss_pred CCCCEEEec--CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-----
Q 013777 169 NGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG----- 241 (436)
Q Consensus 169 ~G~N~VRip--v~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~----- 241 (436)
.-||.+=.- +- |...+|.+ +.| .++.+|++++||+++||.|.--....+. + .+.|.
T Consensus 35 ~~fn~~t~~n~~k-W~~~ep~~-g~~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~-~-----------~p~w~~~~~~ 97 (302)
T d1v0la_ 35 REFNMVTAENEMK-IDATEPQR-GQF---NFSSADRVYNWAVQNGKQVRGHTLAWHS-Q-----------QPGWMQSLSG 97 (302)
T ss_dssp HHCSEEEESSTTS-HHHHCSBT-TBC---CCHHHHHHHHHHHHTTCEEEEEEEECSS-S-----------CCHHHHTCCH
T ss_pred hhCCeeeecccCc-hhhhCCCC-CcC---ChHHHHHHHHHHHHCCCEEEEeccccch-h-----------ccccccccCc
Confidence 347777332 22 33445543 233 4688999999999999998642221111 1 11222
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC---Ch-----hHHHHHHHHHHHHHHhhCCCeEEEEeCCC-CC
Q 013777 242 DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---AL-----DTLKSYYKAGYDAVRKYTSTAYVIMSNRL-GP 312 (436)
Q Consensus 242 ~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~---~~-----~~~~~~~~~~~~aIR~~~p~~~Viv~~~~-~~ 312 (436)
+...+.+.++++.+++||++. |..||++|||..... .. ....++++.+++++|+.+|+..|++.+.. ..
T Consensus 98 ~~~~~~~~~~i~~~~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~i~~a~~~ar~~dP~a~l~~n~~~~~~ 175 (302)
T d1v0la_ 98 SALRQAMIDHINGVMAHYKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKLCYNDYNVEN 175 (302)
T ss_dssp HHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCS
T ss_pred HHHHHHHHHHHHHHHhhcCCC--ceEEEEecccccCCCCccccCcccccchHHHHHHHHHHHHHhCCCCEEeecCccccc
Confidence 355667789999999999974 777999999964221 11 12336889999999999999998887421 11
Q ss_pred CCh---hhhhc-------cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccC
Q 013777 313 ADH---KELLS-------FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEW 382 (436)
Q Consensus 313 ~~~---~~~~~-------~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~ 382 (436)
... ..++. .....+.+-+..|.+... .+.++ +.. .+..+.. .+.|++|+|++...
T Consensus 176 ~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~------p~~~~-~~~-------~l~~~~~-~glpi~iTE~d~~~ 240 (302)
T d1v0la_ 176 WTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGS------PYNSN-FRT-------TLQNFAA-LGVDVAITELDIQG 240 (302)
T ss_dssp TTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTB------CCCTT-HHH-------HHHHHHT-TTCEEEEEEEEETT
T ss_pred CChHHHHHHHHHHHHHHhCCCCccceEEeeccCCCC------CCHHH-HHH-------HHHHHHh-cCCceEEeeccCCC
Confidence 111 11111 112445555666654221 11122 111 1222333 35669999998643
Q ss_pred CCCCcCHHHHHHHHHHHHHHHccCCCcEEEEceecCCCCC
Q 013777 383 NVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHW 422 (436)
Q Consensus 383 ~~~~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~~~W 422 (436)
...+.+.+++...++. ....|-++|.+.. ...|
T Consensus 241 ----~qa~~~~~~~~~~~s~--~~v~gi~~Wg~~D-~~~w 273 (302)
T d1v0la_ 241 ----APASTYANVTNDCLAV--SRCLGITVWGVRD-SDSW 273 (302)
T ss_dssp ----CCHHHHHHHHHHHHTC--TTEEEEEESCSBG-GGST
T ss_pred ----CCHHHHHHHHHHHHhh--hCCeEEEECCCcc-CCCC
Confidence 2345566666554331 2356778897754 3445
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=98.64 E-value=3.4e-07 Score=87.49 Aligned_cols=126 Identities=14% Similarity=0.154 Sum_probs=81.7
Q ss_pred CCCEEEec--CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEE---cC-CCCCCCCCCCCCCCCCCCCCCC-h
Q 013777 170 GINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD---LH-AAPGSQNGNEHSATRDGFQEWG-D 242 (436)
Q Consensus 170 G~N~VRip--v~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilD---lH-~~pg~qng~~~sg~~~~~~~w~-~ 242 (436)
-||.+=.. +- |...+|.+ +.| .++.+|++|++|+++||.|.-= .| ..|. +..... ....+. +
T Consensus 36 ~fn~~t~~n~~k-W~~iep~~-g~~---~~~~~D~~v~~a~~~gi~v~gh~lvw~~~~P~-----W~~~~~-~~~~~~~~ 104 (330)
T d1n82a_ 36 HVNSITAENHMK-FEHLQPEE-GKF---TFQEADRIVDFACSHRMAVRGHTLVWHNQTPD-----WVFQDG-QGHFVSRD 104 (330)
T ss_dssp HCSEEEESSTTS-HHHHCSBT-TBC---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCG-----GGGBCS-SSSBCCHH
T ss_pred hcCccccccCCC-hHhhcCCC-Ccc---ChHHHHHHHHHHHHCCCEEEEeecccCCCCCc-----hhccCC-cCCcCCHH
Confidence 37777654 33 44455544 234 4688999999999999997531 22 2332 111100 011122 3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChhHH-----HHHHHHHHHHHHhhCCCeEEEEeC
Q 013777 243 SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRKYTSTAYVIMSN 308 (436)
Q Consensus 243 ~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~~~p~~~Viv~~ 308 (436)
...+.+.++++.+++||++. |..||++|||..... ....+ ..+++.++.++|+.+|+..+++.+
T Consensus 105 ~~~~~~~~~i~~v~~ry~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~~~af~~ar~~~P~a~l~~n~ 177 (330)
T d1n82a_ 105 VLLERMKCHISTVVRRYKGK--IYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDALLFYND 177 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--CCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCC--ceeEEEeccccccCccccccCChhhhccChHHHHHHHHHHHHhCCcceEeecc
Confidence 45567788999999999975 777999999964211 11112 357899999999999999988874
|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Thermoascus aurantiacus [TaxId: 5087]
Probab=98.63 E-value=1.4e-07 Score=89.44 Aligned_cols=201 Identities=19% Similarity=0.299 Sum_probs=118.0
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC------hhHHHHHHHHHHH
Q 013777 181 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG------DSNVADTVAVIDF 254 (436)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~------~~~~~~~~~~~~~ 254 (436)
|...+|.++ .| .++.+|++++||+++||.|.- |.. .+++. .+.|. +...+...++++.
T Consensus 51 W~~~ep~~G-~~---~~~~~D~~v~~a~~~gi~vrG--H~l------vW~~~----~P~W~~~~~~~~~~~~~~~~~i~~ 114 (303)
T d1i1wa_ 51 WDATEPSQG-NF---NFAGADYLVNWAQQNGKLIRG--HTL------VWHSQ----LPSWVSSITDKNTLTNVMKNHITT 114 (303)
T ss_dssp HHHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEE--EEE------ECSTT----CCHHHHTCCCHHHHHHHHHHHHHH
T ss_pred chhhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--eee------eecCc----CchhhhcccccHHHHHHHHHHHHH
Confidence 334455432 33 468999999999999998742 221 11111 12221 2344566789999
Q ss_pred HHHHhCCCCceeEEEeecCCCCCCCC--hhHH-----HHHHHHHHHHHHhhCCCeEEEEeCC--CCCCCh--hhh-----
Q 013777 255 LAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVIMSNR--LGPADH--KEL----- 318 (436)
Q Consensus 255 lA~ry~~~~~v~g~eL~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~Viv~~~--~~~~~~--~~~----- 318 (436)
+++||++. |..||++|||...... ...+ .+|++.+++.+|+++|+..+++.+- ...... ..+
T Consensus 115 v~~rY~g~--i~~WdVvNE~~~~~~~~r~~~~~~~~g~d~i~~af~~Ar~~dP~a~L~~Ndy~~~~~~~~k~~~~~~~v~ 192 (303)
T d1i1wa_ 115 LMTRYKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSASYPKTQAIVNRVK 192 (303)
T ss_dssp HHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCCSSSHHHHHHHHHHH
T ss_pred HHHHcCCC--CchhhhcccccCCCcccccCchhhcccHHHHHHHHHHHHHhCCCCEEEeecCcccCCcHHHHHHHHHHHH
Confidence 99999874 7789999999753211 1111 2578899999999999999998742 111111 111
Q ss_pred --hccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHH
Q 013777 319 --LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFA 396 (436)
Q Consensus 319 --~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~ 396 (436)
.....+.+.+-+..|.-.. .... +. +.+..+...++++|.|+|+.... ...+.+++++
T Consensus 193 ~l~~~g~~iDgiG~Q~H~~~~--------~~~~----~~----~~~~~~~~~g~~~i~iTElDi~~----~qa~~y~~~~ 252 (303)
T d1i1wa_ 193 KWRAAGVPIDGIGSQTHLSAG--------QGAS----VL----QALPLLASAGTPEVAITELDVAG----ASSTDYVNVV 252 (303)
T ss_dssp HHHHTTCCCCEEEECCEECTT--------THHH----HH----HHHHHHHTTCCSEEEEEEEEETT----CCHHHHHHHH
T ss_pred HHHhCCCCccceEeeeccCCC--------CcHH----HH----HHHHHHHHcCCCceeeccccccc----ccHHHHHHHH
Confidence 1111234455555553211 1221 11 12233445667789999997532 3455667776
Q ss_pred HHHHHHHccCCCcEEEEceecCCCCC
Q 013777 397 NAQLDVYGRATFGWAYWAHKCEANHW 422 (436)
Q Consensus 397 ~~q~~~~~~~~~Gw~~W~~k~~~~~W 422 (436)
+..++. ....|.++|.+.. ...|
T Consensus 253 ~~~~~~--p~v~git~Wg~~D-~~sW 275 (303)
T d1i1wa_ 253 NACLNV--SSCVGITVWGVAD-PDSW 275 (303)
T ss_dssp HHHHHC--TTEEEEEESCSBG-GGST
T ss_pred HHHhcc--CCceEEEEeCCcc-CCCc
Confidence 655431 2457889998875 3445
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=98.61 E-value=1.6e-07 Score=91.09 Aligned_cols=186 Identities=16% Similarity=0.168 Sum_probs=106.7
Q ss_pred CCCCEEEe--cCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCC-CC--CCCCCCCCCCCCCCCCC-h
Q 013777 169 NGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP-GS--QNGNEHSATRDGFQEWG-D 242 (436)
Q Consensus 169 ~G~N~VRi--pv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~p-g~--qng~~~sg~~~~~~~w~-~ 242 (436)
.-||.|=. .+- |...+|.+ +.| .++.+|++|++|+++||+|.- |... .+ +...+.. ..... +
T Consensus 45 ~~fn~~t~eN~mK-W~~iep~~-G~~---nf~~~D~~v~~a~~~gi~v~G--H~lvW~~~~~~~~~~~-----~~~~~~~ 112 (364)
T d1us3a2 45 KHFNHLTAGNIMK-MSYMQPTE-GNF---NFTNADAFVDWATENNMTVHG--HALVWHSDYQVPNFMK-----NWAGSAE 112 (364)
T ss_dssp HHCSEEEESSTTS-HHHHCSBT-TBC---CCHHHHHHHHHHHHTTCEEEE--EEEEECCGGGSCHHHH-----TCCSCHH
T ss_pred HhCCeeeecccCC-hHHhcCCC-Ccc---CcHHHHHHHHHHHHCCCEEEE--eecCCCcccCCccccc-----cCCccHH
Confidence 33566632 122 33445544 234 468899999999999999863 2211 00 1000000 00111 3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC------ChhH-H------HHHHHHHHHHHHhhCCCeEEEEeCC
Q 013777 243 SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV------ALDT-L------KSYYKAGYDAVRKYTSTAYVIMSNR 309 (436)
Q Consensus 243 ~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~------~~~~-~------~~~~~~~~~aIR~~~p~~~Viv~~~ 309 (436)
...+...++++.+++||++...|..||++|||..... .... + ..|+..+++++|+.+|+..+++.+.
T Consensus 113 ~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~ndy 192 (364)
T d1us3a2 113 DFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYNDY 192 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred HHHHHHHHHHHHHHHhhccCCceEEEEEecccccCCCCcccccccchHHHHhCCchHHHHHHHHHHHHhccccceeeccc
Confidence 4456677899999999997778999999999964321 1111 2 2378899999999999998888742
Q ss_pred CC-CCCh---------hhhhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeeccc
Q 013777 310 LG-PADH---------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWT 379 (436)
Q Consensus 310 ~~-~~~~---------~~~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg 379 (436)
.. .... ..+.....+.+.+-+..|.|... .+.+ .+.. .+..+.. .+.+|.|+|++
T Consensus 193 ~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~------p~~~----~i~~----~l~~~~~-~g~~I~iTEld 257 (364)
T d1us3a2 193 NIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNY------PSIA----NISA----AMKKVVD-LGLLVKITELD 257 (364)
T ss_dssp STTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SCHH----HHHH----HHHHHHT-TTCEEEEEEEE
T ss_pred cccccchhhhHHHHHHHHHHhCCCccccceeeeeccCCC------CCHH----HHHH----HHHHHHh-cCCeeEEEeee
Confidence 11 1111 11112223456677888877431 1222 2221 2222333 36679999997
Q ss_pred cc
Q 013777 380 CE 381 (436)
Q Consensus 380 ~~ 381 (436)
..
T Consensus 258 i~ 259 (364)
T d1us3a2 258 VA 259 (364)
T ss_dssp EE
T ss_pred Ee
Confidence 53
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.43 E-value=1.2e-07 Score=75.92 Aligned_cols=65 Identities=14% Similarity=0.106 Sum_probs=54.6
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEE
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQ 77 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~ 77 (436)
.+|||+|++..| .|++.++ ..|.|.|-..+.+.+.+|+ ||+||+++. ++.|.|++++|+.+|.|+
T Consensus 46 ~~gkyw~~~~dG--~l~~~~~---~~~~F~le~~~~~~~~~~a-nGkYL~~~~---~G~L~A~~~~~~~~~lwE 110 (111)
T d1dfca4 46 STGKYWTVGSDS--AVTSSGD---TPVDFFFEFCDYNKVAIKV-GGRYLKGDH---AGVLKASAETVDPASLWE 110 (111)
T ss_dssp TTSCBCEECSSC--BEESCCS---SCCCBEEEEEETTEEEEEE-TTEEEEECG---GGBEEEEESSCCGGGCBB
T ss_pred CCCCEEEEcCCC--cEEeCCC---CCCCEEEEEeCCCEEEEcc-CCeEEEeCC---CCeEEeCCCCCCccceEe
Confidence 589999999876 4666554 3588999888999999997 999999876 457999999999999885
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=98.34 E-value=8.3e-06 Score=78.33 Aligned_cols=163 Identities=14% Similarity=0.129 Sum_probs=95.6
Q ss_pred hHHHHHHHHHHHHHcCCEEE---EEcCCCCCCCCCCCCCCCCCCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEee
Q 013777 196 SSKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELI 271 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~Vi---lDlH~~pg~qng~~~sg~~~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~ 271 (436)
.++..|++|+||+++||.|- |=-|.. .+.+-.....+ .... +.......+.++.++.||++ .|..||++
T Consensus 58 ~~~~~D~~v~~a~~~gi~vrGH~LvW~~~----~P~w~~~~~~~-~~~~~~~l~~~~~~~I~~v~~ry~g--~i~~WDVv 130 (350)
T d1ur1a_ 58 NWKDADAFVAFGTKHNLHMVGHTLVWHSQ----IHDEVFKNADG-SYISKAALQKKMEEHITTLAGRYKG--KLAAWDVV 130 (350)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECSSS----SCGGGTBCTTS-CBCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEE
T ss_pred ChHHHHHHHHHHHHCCCEEEEEEEEEccc----ccccccccCCc-cccCHHHHHHHHHHHHHHHHHhcCC--cceEEEEe
Confidence 36889999999999999873 334431 11111000001 1111 33455667899999999986 47789999
Q ss_pred cCCCCCCCC--hhH----H-HHHHHHHHHHHHhhCCCeEEEEeCCCC-CCC----h----hhhhccCCCCCcEEEEEeec
Q 013777 272 NEPLAPGVA--LDT----L-KSYYKAGYDAVRKYTSTAYVIMSNRLG-PAD----H----KELLSFASGLSRVVIDVHYY 335 (436)
Q Consensus 272 NEP~~~~~~--~~~----~-~~~~~~~~~aIR~~~p~~~Viv~~~~~-~~~----~----~~~~~~~~~~~nvv~~~H~Y 335 (436)
|||...... ... + ..|+.+++++.|+++|+..+++.+-.. ... . ..+..-..+.+.|-+..|..
T Consensus 131 NE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~akL~~Ndyn~~~~~k~~~~~~lv~~l~~~GvpiDgIGlQ~H~~ 210 (350)
T d1ur1a_ 131 NEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMYNDYNIERTGKREATVEMIERLQKRGMPIHGLGIQGHLG 210 (350)
T ss_dssp ECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESSTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEEE
T ss_pred cccccCCCCcccchhhhhcCcHHHHHHHHHHHhhCCCceEeecccccccccccHHHHHHHHHHHhCCCCceEEEEeeecc
Confidence 999753211 111 1 357889999999999999988864211 111 1 11222223467788888976
Q ss_pred CcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccc
Q 013777 336 NLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTC 380 (436)
Q Consensus 336 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~ 380 (436)
... .+.++ +.+ .+..+.. .+.++.++|+..
T Consensus 211 ~~~------~~~~~----i~~----~l~~~~~-lg~~i~iTElDv 240 (350)
T d1ur1a_ 211 IDT------PPIAE----IEK----SIIAFAK-LGLRVHFTSLDV 240 (350)
T ss_dssp SSC------SCHHH----HHH----HHHHHHT-TTCEEEEEEEEE
T ss_pred CCC------CCHHH----HHH----HHHHHHh-cCCceeecccce
Confidence 431 12222 221 1222333 366799999864
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.27 E-value=1.6e-06 Score=82.07 Aligned_cols=120 Identities=20% Similarity=0.178 Sum_probs=82.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++||+.||++|+|+||+.-+ ..+ +. +.++++|.++||.|+.++-... ... .
T Consensus 48 ~~di~l~ke~G~N~IR~~~~----~~~--p~----------~~f~d~cD~~GilV~~e~~~~~---~~~----------~ 98 (348)
T d2je8a5 48 QTLFRDMKEANMNMVRIWGG----GTY--EN----------NLFYDLADENGILVWQDFMFAC---TPY----------P 98 (348)
T ss_dssp HHHHHHHHHTTCCEEEECTT----SCC--CC----------HHHHHHHHHHTCEEEEECSCBS---SCC----------C
T ss_pred HHHHHHHHHcCCCEEecCCC----CCC--CC----------HHHHHHHHHCCCEEEeccchhc---cCC----------C
Confidence 68999999999999998321 111 11 4567899999999999985321 110 0
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC--------CCChhHHHH--------HHHHHHHHHHhhCCCeE
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP--------GVALDTLKS--------YYKAGYDAVRKYTSTAY 303 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~--------~~~~~~~~~--------~~~~~~~aIR~~~p~~~ 303 (436)
..+...+.+.+-++.+.+|++++|+|+.|.+.||+... ......... +-......+++.+|+.+
T Consensus 99 ~~~~~~~~~~~~~~~~I~r~rNHPSIi~W~~gnE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (348)
T d2je8a5 99 SDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRF 178 (348)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEEEeccCccccchhhccchhhhhHHHHHHHHHhhhhhHHHHHHHHHHHhCCCCc
Confidence 11466778888999999999999999999999997521 112222221 22234567788889888
Q ss_pred EEEeC
Q 013777 304 VIMSN 308 (436)
Q Consensus 304 Viv~~ 308 (436)
+...+
T Consensus 179 ~~~~~ 183 (348)
T d2je8a5 179 YVHSS 183 (348)
T ss_dssp EESSB
T ss_pred eecCC
Confidence 87653
|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.25 E-value=1.6e-05 Score=76.20 Aligned_cols=132 Identities=22% Similarity=0.218 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHcCCEEEE-EcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCC
Q 013777 196 SSKVLDNAFDWAEKYGVKVIV-DLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEP 274 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~Vil-DlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP 274 (436)
.++..|++++||+++||.|.- .|-..+..|.+.+.+... +...+...+.++.+++||++. |-.||++|||
T Consensus 58 n~~~~D~~v~~a~~ng~~vrGH~LvW~~~~~~P~w~~~~~-------~~~~~~~~~~I~~v~~ry~g~--i~~WDVvNE~ 128 (346)
T d1w32a_ 58 SFTNSDRLVSWAAQNGQTVHGHALVWHPSYQLPNWASDSN-------ANFRQDFARHIDTVAAHFAGQ--VKSWDVVNEA 128 (346)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECCCGGGCCTTCSTTC-------TTHHHHHHHHHHHHHHHTTTT--CSEEEEEECC
T ss_pred CchHHHHHHHHHHHCCCEEEEEeeecCCcccCcccccCCc-------HHHHHHHHHHHHHHHHhhCCc--ceEEEEEeee
Confidence 468899999999999998843 111111222222221110 245667788999999999974 7789999999
Q ss_pred CCCCCC------------hh-HH-----HHHHHHHHHHHHhhCCCeEEEEeCCCC-CCCh--hhh-------hccCCCCC
Q 013777 275 LAPGVA------------LD-TL-----KSYYKAGYDAVRKYTSTAYVIMSNRLG-PADH--KEL-------LSFASGLS 326 (436)
Q Consensus 275 ~~~~~~------------~~-~~-----~~~~~~~~~aIR~~~p~~~Viv~~~~~-~~~~--~~~-------~~~~~~~~ 326 (436)
...... .. -+ ..|++.+++..|+.+|+..+++.+-.. .... ..+ ..-..+.+
T Consensus 129 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~~aF~~Ar~~dP~a~L~~Ndyn~~~~~~k~~~~~~lv~~L~~~g~pID 208 (346)
T d1w32a_ 129 LFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRARAADPTAELYYNDFNTEENGAKTTALVNLVQRLLNNGVPID 208 (346)
T ss_dssp BCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccccccCccccccccccccchhhhhccChHHHHHHHHHHHHhCCCCEEEeccCCcccCcHHHHHHHHHHHHHHhcCCccc
Confidence 753210 01 12 257899999999999999998875211 1111 111 12223567
Q ss_pred cEEEEEeecC
Q 013777 327 RVVIDVHYYN 336 (436)
Q Consensus 327 nvv~~~H~Y~ 336 (436)
.+-+..|...
T Consensus 209 gIG~Q~H~~~ 218 (346)
T d1w32a_ 209 GVGFQMHVMN 218 (346)
T ss_dssp EEEECCEEES
T ss_pred eEEEEeeccC
Confidence 8889999753
|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glycosyl hydrolase family 5 xylanase, catalytic domain species: Erwinia chrysanthemi [TaxId: 556]
Probab=98.23 E-value=4.7e-05 Score=70.44 Aligned_cols=210 Identities=14% Similarity=0.101 Sum_probs=117.0
Q ss_pred hCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHH
Q 013777 168 SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVAD 247 (436)
Q Consensus 168 ~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~ 247 (436)
.+|++.+|+||+.- . . .+...-.+++.|.++|++|+...-.+|+.... ++...+...-.+...+.
T Consensus 31 g~g~s~~R~~id~~------~-~-----~~~~~i~~~k~A~~~~~ki~~spWSpP~wMK~---n~~~~~gg~L~~~~~~~ 95 (277)
T d1nofa2 31 QIGLSIMRVRIDPD------S-S-----KWNIQLPSARQAVSLGAKIMATPWSPPAYMKS---NNSLINGGRLLPANYSA 95 (277)
T ss_dssp CCCCCEEEEECCSS------G-G-----GGGGGHHHHHHHHHTTCEEEEECSCCCGGGBT---TSSSBSCCBBCGGGHHH
T ss_pred CCcceEEEeeeCCC------c-c-----hhhHhhHHHHHHHHcCCcEEEcCCCCcHHHcC---CCCcccCCccCHHHHHH
Confidence 58999999999421 1 1 12223456667889999999999998874210 11111111112567778
Q ss_pred HHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC------CChhHHHHHHHHHHHHHHhhCCCeEEEEeCCCCC--CChhhh
Q 013777 248 TVAVIDFLAARYANRP-SLAAIELINEPLAPG------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGP--ADHKEL 318 (436)
Q Consensus 248 ~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~~------~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~~~~--~~~~~~ 318 (436)
+.+++...++.|+.+- .|.++.+.|||.... .+.+.+.++++...... . +..|+..+..+. ......
T Consensus 96 ~A~Yl~~~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~~~~~~~~~i~~~~~~~---~-~~ki~~~d~~~~~~~~~~~~ 171 (277)
T d1nofa2 96 YTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGSKF---G-SLKVIVAESLGFNPALTDPV 171 (277)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGGGG---T-TSEEEEEEETTCCGGGTHHH
T ss_pred HHHHHHHHHHHHHHcCCCeeEEeecCCCCCCCCCCCcccCHHHHHHHHHHhhhcc---c-ccceEeehhcCCcHHHhHHH
Confidence 8888888888888754 578899999998632 23466666665543222 2 334544432211 111222
Q ss_pred hc-cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHHHHHHHHH
Q 013777 319 LS-FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFAN 397 (436)
Q Consensus 319 ~~-~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~~~~~~~~ 397 (436)
+. ......-..+.+|.|..-. ... . . .+..+++++++|.+........+.+....+.+
T Consensus 172 l~d~~a~~~v~~ia~H~Y~~~~---~~~--~-----~-----------~~~~~K~lw~TE~~~~~~~~~~~w~~a~~~a~ 230 (277)
T d1nofa2 172 LKDSDASKYVSIIGGHLYGTTP---KPY--P-----L-----------AQNAGKQLWMTEHYVDSKQSANNWTSAIEVGT 230 (277)
T ss_dssp HTCHHHHTTCCEEEEECTTSCC---CCC--H-----H-----------HHHTTCEEEEEEECSCTTSCTTCHHHHHHHHH
T ss_pred hhChHHHHHHHHhhccCCCCCc---ccc--h-----h-----------hhCCCccceeEEeeccCCCCcccHHHHHHHHH
Confidence 21 1011122578999995311 000 0 0 01235679999987533222234444455555
Q ss_pred HHHHHHccCCCcEEEEceec
Q 013777 398 AQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 398 ~q~~~~~~~~~Gw~~W~~k~ 417 (436)
.....+..+.-+|.+|....
T Consensus 231 ~i~~~l~~~~~a~~~W~~~~ 250 (277)
T d1nofa2 231 ELNASMVSNYSAYVWWYIRR 250 (277)
T ss_dssp HHHHHHHTTEEEEEEEESBS
T ss_pred HHHHHHHcCCeeEEEcCCcC
Confidence 55555555667899996543
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=98.14 E-value=6.3e-05 Score=72.53 Aligned_cols=224 Identities=13% Similarity=0.127 Sum_probs=119.3
Q ss_pred CCCEEEecCc--cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCC-CCCCCCCCCCCCCCCCC------C
Q 013777 170 GINAVRIPVG--WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEHSATRDGFQE------W 240 (436)
Q Consensus 170 G~N~VRipv~--~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~p-g~qng~~~sg~~~~~~~------w 240 (436)
-||+|= |-+ -|...+|.++ .| .++..|++|+||+++||.|.- |..- ++|.+.+-.-...+.+. +
T Consensus 43 ~Fn~~t-~eN~mKW~~iep~~G-~~---n~~~aD~~v~~a~~ngi~vrG--H~LvW~~~~P~W~~~~~~~~~~~~~~~~~ 115 (371)
T d1r85a_ 43 HFNSIV-AENVMKPISIQPEEG-KF---NFEQADRIVKFAKANGMDIRF--HTLVWHSQVPQWFFLDKEGKPMVNETDPV 115 (371)
T ss_dssp HCSEEE-ESSTTSHHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--ECSCCSTTCCGGGGBCTTSSBGGGCCCHH
T ss_pred hcCeec-ccccCcchhhcCCCC-cc---CcHHHHHHHHHHHHCCCEEEE--eEEEeeccccccccccccccccccccccc
Confidence 377773 422 1334455432 33 468899999999999999854 3321 12222221100011110 0
Q ss_pred C-----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC--h----hHH-HHHHHHHHHHHHhh-CCCeEEEEe
Q 013777 241 G-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--L----DTL-KSYYKAGYDAVRKY-TSTAYVIMS 307 (436)
Q Consensus 241 ~-----~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~--~----~~~-~~~~~~~~~aIR~~-~p~~~Viv~ 307 (436)
. +...+...++++.++.||++ .|..||++|||...... . +.+ ..|+..++...|+. +|...+++.
T Consensus 116 ~~~~~~e~l~~~~~~~I~~v~~rY~g--~I~~WDVvNE~~~~~~~~r~~~~~~~~g~dyi~~af~~A~~~~~p~~~L~~N 193 (371)
T d1r85a_ 116 KREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMN 193 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ccccCHHHHHHHHHHHHHHHHHHcCC--CceEEEEEeecccCCCCcccCchhhccCcHHHHHHHHHHHHhcCCcceeeec
Confidence 0 12234456789999999987 58889999999753211 1 111 36788999999987 567677775
Q ss_pred CC-C-CCCChhh-------hhccCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecc
Q 013777 308 NR-L-GPADHKE-------LLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW 378 (436)
Q Consensus 308 ~~-~-~~~~~~~-------~~~~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEw 378 (436)
+- . ....... +.....+.+.|-+..|..... .+.+ .+.. .+..+... |.+|.|+|+
T Consensus 194 dy~~~~~~k~~~~~~~v~~l~~~g~pidgIG~Q~H~~~~~------~~~~----~i~~----~l~~~a~~-Gl~i~ITEl 258 (371)
T d1r85a_ 194 DYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGW------PSEA----EIEK----TINMFAAL-GLDNQITEL 258 (371)
T ss_dssp ESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSS------SCHH----HHHH----HHHHHHHT-TCEEEEEEE
T ss_pred cccccccchhHHHHHHHHHHHHCCCCcceeeccccccCCC------CCHH----HHHH----HHHHHHHc-CCceEEeee
Confidence 31 1 1111111 111223466778888975421 1222 2221 22233333 567999999
Q ss_pred cccCCC--C-------CcC---HHHHHHHHHHHHHHHcc---CCCcEEEEceec
Q 013777 379 TCEWNV--K-------DAS---KQDYQRFANAQLDVYGR---ATFGWAYWAHKC 417 (436)
Q Consensus 379 g~~~~~--~-------~~~---~~~~~~~~~~q~~~~~~---~~~Gw~~W~~k~ 417 (436)
-..... . ..+ .....++++..+.++.+ ..-|.++|.+-.
T Consensus 259 DV~~~~~~~~~~~~~~~~~~e~~~~QA~~y~~~~~~~~~~~p~v~git~WG~~D 312 (371)
T d1r85a_ 259 DVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIAD 312 (371)
T ss_dssp EECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSST
T ss_pred EeccCCCccccCcccccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC
Confidence 542110 0 011 12234455555555533 245889997755
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.92 E-value=7.6e-05 Score=71.68 Aligned_cols=159 Identities=15% Similarity=0.159 Sum_probs=94.9
Q ss_pred HHHHHHHHhCCCCEEEecCcc----ccc---cCCC---CCC---CC--c-cchHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGW----WIA---NDPT---PPK---PF--V-GGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~----~~~---~~~~---~~~---~~--~-~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg 223 (436)
.+-++.|++++.-.||.|=+- +.+ ..|. ++. .+ . ...+ -+|+.+++|++.|..++|.+..-.+
T Consensus 37 ~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~~w~~~~~~~~-G~~Ef~~~~~~~gaep~~~vn~g~~ 115 (367)
T d1qw9a2 37 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEI-GLNEFMDWAKMVGAEVNMAVNLGTR 115 (367)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSS-CHHHHHHHHHHHTCEEEEEECCSSC
T ss_pred HHHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCccCCCCCCcCcCCC-CHHHHHHHHHHhCCeEEEEEeCCCc
Confidence 577899999999999998651 222 2221 110 01 0 1122 3799999999999999998865211
Q ss_pred CCCCCCCCCCCCCCCCCChhHHHHHHHHHH--------HHHHHhC-CCC-ceeEEEeecCCCCC----CCChhHHHHHHH
Q 013777 224 SQNGNEHSATRDGFQEWGDSNVADTVAVID--------FLAARYA-NRP-SLAAIELINEPLAP----GVALDTLKSYYK 289 (436)
Q Consensus 224 ~qng~~~sg~~~~~~~w~~~~~~~~~~~~~--------~lA~ry~-~~~-~v~g~eL~NEP~~~----~~~~~~~~~~~~ 289 (436)
. ......++++.. .+-.+.. ..| .|--|||-||+..+ ..+.+.+...++
T Consensus 116 ~-----------------~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~g~~~~g~~~~~~Y~~~~~ 178 (367)
T d1qw9a2 116 G-----------------IDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIAC 178 (367)
T ss_dssp C-----------------HHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHHH
T ss_pred c-----------------HHHHHHHHHHHccCCCCHHHHHHHHcCCCCCCCceEEEeccccccccccCCCCHHHHHHHHH
Confidence 0 122223333321 2222221 123 57789999998743 245678889999
Q ss_pred HHHHHHHhhCCCeEEEEeCCCCC--CChhhh----hccCCCCCcEEEEEeecCc
Q 013777 290 AGYDAVRKYTSTAYVIMSNRLGP--ADHKEL----LSFASGLSRVVIDVHYYNL 337 (436)
Q Consensus 290 ~~~~aIR~~~p~~~Viv~~~~~~--~~~~~~----~~~~~~~~nvv~~~H~Y~~ 337 (436)
+.++++|+.+|+..|+.+++-.. ....++ ++. ....-..+++|+|..
T Consensus 179 ~f~~amk~~dP~i~lia~g~~~~~~~~~~~w~~~vl~~-~~~~iD~is~H~Y~~ 231 (367)
T d1qw9a2 179 EAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDH-TYDHVDYISLHQYYG 231 (367)
T ss_dssp HHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHH-HGGGCSEEEEEEEEC
T ss_pred HHHHHHhhcCCCeeEEEEeCCCCCCcccchHHHHHHhh-ccccCCcccccCCCC
Confidence 99999999999987776642111 111112 221 122235788998864
|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glucosylceramidase, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.68 E-value=0.0013 Score=62.50 Aligned_cols=234 Identities=16% Similarity=0.148 Sum_probs=121.6
Q ss_pred hCCCCEEEecCcccccc------CCCCCC----CCc--cchHHHHHHHHHHHHH---cCCEEEEEcCCCCCCC--CCCCC
Q 013777 168 SNGINAVRIPVGWWIAN------DPTPPK----PFV--GGSSKVLDNAFDWAEK---YGVKVIVDLHAAPGSQ--NGNEH 230 (436)
Q Consensus 168 ~~G~N~VRipv~~~~~~------~~~~~~----~~~--~~~l~~ld~~v~~a~~---~Gi~VilDlH~~pg~q--ng~~~ 230 (436)
-+|++.+|+||+=-.+. ...+.. .+. ...-+.+..++..|++ .+|+|+...-.+|+.. |+...
T Consensus 36 Glgls~~R~~IG~~d~~~~~yt~~d~~~d~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~i~aspWSpP~wMk~n~~~~ 115 (354)
T d2nt0a2 36 GIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVN 115 (354)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCSSS
T ss_pred CceeEEEEEeecCCCCCCCCCcccCCCCCccccCCCcchhhhhhHHHHHHHHHHhcCCCeEEEEcCCCCchhhhcCCccc
Confidence 59999999999621110 011111 111 1111222335555554 4789999998888742 21111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC----------CCChhHHHHHHHH-HHHHHHhh
Q 013777 231 SATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP----------GVALDTLKSYYKA-GYDAVRKY 298 (436)
Q Consensus 231 sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~-~v~g~eL~NEP~~~----------~~~~~~~~~~~~~-~~~aIR~~ 298 (436)
.+.. ....-.+...+.+.+++..++++|+.+- .|-++.+.|||... ..+++...++..+ +..++++.
T Consensus 116 ~~~~-~~~~l~~~~~~~yA~Yl~~~v~~y~~~Gi~i~~isp~NEP~~~~~~~~~~~~~~~t~~~~~~fi~~~L~~~l~~~ 194 (354)
T d2nt0a2 116 GKGS-LKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANS 194 (354)
T ss_dssp SSCB-BSSCTTSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHHTS
T ss_pred CCCC-cCCccchhHHHHHHHHHHHHHHHHHHcCCCceEeccCcCcCcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 1100 0000114567788888888888898764 57789999999631 1346778888865 67788877
Q ss_pred CCCe-EEEE-eCCC-CCCCh-hhhhc-cCCCCCcEEEEEeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeE
Q 013777 299 TSTA-YVIM-SNRL-GPADH-KELLS-FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT 373 (436)
Q Consensus 299 ~p~~-~Viv-~~~~-~~~~~-~~~~~-~~~~~~nvv~~~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v 373 (436)
+... .++. .... ..... ...+. ......-.++.+|.|.... ......+..+. .+..++++
T Consensus 195 g~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~v~~ia~H~Y~~~~-----~~~~~~~~~~~----------~~~p~k~~ 259 (354)
T d2nt0a2 195 THHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFL-----APAKATLGETH----------RLFPNTML 259 (354)
T ss_dssp TTTTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTCCEEEEEEETTSC-----CCHHHHHHHHH----------HHCTTSEE
T ss_pred CCCceEEEeeCCcccchHHHHHHHhcCHhHHHhcCeEEEecCCCCC-----CchhHHHHHHH----------HhCCCceE
Confidence 6543 3333 2211 11111 11111 1011122479999995311 11111111111 12346679
Q ss_pred EeecccccCCC-C----CcCHHHHHHHHHHHHHHHccCCCcEEEEceec
Q 013777 374 FVGEWTCEWNV-K----DASKQDYQRFANAQLDVYGRATFGWAYWAHKC 417 (436)
Q Consensus 374 ~vGEwg~~~~~-~----~~~~~~~~~~~~~q~~~~~~~~~Gw~~W~~k~ 417 (436)
+.+|.++.... . ......-..+.+..+.-+.....+|.+|.+-.
T Consensus 260 w~TE~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~a~~~W~l~~ 308 (354)
T d2nt0a2 260 FASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLAL 308 (354)
T ss_dssp EEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEEESEE
T ss_pred EeeeeccCCCCCCcccccCcHHHHHHHHHHHHHHHHhhhhhheehhhhc
Confidence 99998753211 0 12233334455555555555667999997643
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=97.22 E-value=0.00013 Score=70.20 Aligned_cols=60 Identities=18% Similarity=0.346 Sum_probs=50.8
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~pg 223 (436)
++|++.||++|+|.|+|+|- |...++..|+.| .+..+|++++.++++||+ |||..|...|
T Consensus 32 ~~~L~~LK~aGV~gV~vdVw-WGivE~~~Pg~Y---dws~yd~l~~mv~~~GLKi~vvmsfH~cGg 93 (417)
T d1vema2 32 ENDLRWAKQNGFYAITVDFW-WGDMEKNGDQQF---DFSYAQRFAQSVKNAGMKMIPIISTHQCGG 93 (417)
T ss_dssp HHHHHHHHHTTEEEEEEEEE-HHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBSS
T ss_pred HHHHHHHHHcCCCEEEEeee-eeeeecCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 89999999999999999995 777777655666 578999999999999987 5888887433
|
| >d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase H N-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=96.83 E-value=0.0069 Score=55.19 Aligned_cols=200 Identities=13% Similarity=0.104 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC
Q 013777 198 KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 277 (436)
Q Consensus 198 ~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~ 277 (436)
..+...++.+...|..++|.++-..++ ......| .+-+...++.+.|++ + +.| |+ +.+.+|++..
T Consensus 42 ~~~~~~~~~~~~~g~~~~it~~P~~~~-----~~~ia~G------~yD~~i~~~a~~l~~-~-g~p-v~-~R~~hE~ng~ 106 (273)
T d2v3ga1 42 SWVRPYADAVYNNGSILMITWEPWEYN-----TVDIKNG------KADAYITRMAQDMKA-Y-GKE-IW-LRPLHEANGD 106 (273)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCC-----HHHHHTT------TTHHHHHHHHHHHHH-H-CSC-EE-EEESCCTTSS
T ss_pred hhHHHHHHHHHhCCCeEEEEeCCCCCC-----HHHHhCc------chHHHHHHHHHHHHh-c-CCC-EE-EEecccCCCC
Confidence 556667778889999999988732110 0000001 111223333344433 2 345 33 8899998853
Q ss_pred -----------CCChhHHHHHHHHHHHHHHhhCCCeEEEEeCC--CCCCChhhhhccCCCCCcE-EEEEeecCcCCCC-C
Q 013777 278 -----------GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR--LGPADHKELLSFASGLSRV-VIDVHYYNLFSNN-F 342 (436)
Q Consensus 278 -----------~~~~~~~~~~~~~~~~aIR~~~p~~~Viv~~~--~~~~~~~~~~~~~~~~~nv-v~~~H~Y~~~~~~-~ 342 (436)
..+++.+++.++.+++++|+.+.+.++++=+. ........+..+..+++-| ++.++.|...... +
T Consensus 107 W~~W~~~~~~~~~~p~~y~~a~r~v~~~~r~~g~~nv~~vw~p~~~~~~~~~~~~~yYPGDdyVD~vG~d~Y~~~~~~~~ 186 (273)
T d2v3ga1 107 WYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYPGDNYVDYTSIDGYNWGTTQSW 186 (273)
T ss_dssp SSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCCCGGGCSBEEEEEEECTTCCTT
T ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCChhhHHhhCCCCCEEEEEEEeccCCCCcccc
Confidence 12568899999999999999877666655321 1111222333333344443 7888888643221 1
Q ss_pred CC--CChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccCCCCCcCHH-HHHHHHHHHHHHHccCCCcEEEEceecCC
Q 013777 343 NG--LNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQ-DYQRFANAQLDVYGRATFGWAYWAHKCEA 419 (436)
Q Consensus 343 ~~--~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~~~~~~~~~-~~~~~~~~q~~~~~~~~~Gw~~W~~k~~~ 419 (436)
.. .+..+.+.. .+..+ +..++|++|+|||.... +..+. -++++++.....+. ...+..|+.... .
T Consensus 187 ~~~~~~~~~~~~~-------~~~~~-~~~~KPi~i~E~G~~~~--~~~~~~W~~~~~~~~~~~~p-~v~~~vwfn~~~-~ 254 (273)
T d2v3ga1 187 GSQWQSFDQVFSR-------AYQAL-ASINKPIIIAEFASAEI--GGNKARWITEAYNSIRTSYN-KVIAAVWFHENK-E 254 (273)
T ss_dssp TCCCCCHHHHHHH-------HHHHH-TTSSSCEEEEEEEECST--TSCHHHHHHHHHHHHHHHCT-TEEEEEEECCBS-S
T ss_pred hhhhhhHHHHHHH-------HHHHH-HhCCCCEEEEeecCCCC--CCchhHHHHHHHHHHHhhCC-cEEEEEEecCCC-C
Confidence 11 112221111 12222 33467799999997543 22332 23333333222232 233444554433 3
Q ss_pred CCCCh
Q 013777 420 NHWSL 424 (436)
Q Consensus 420 ~~Ws~ 424 (436)
.+|.+
T Consensus 255 ~Dwr~ 259 (273)
T d2v3ga1 255 TDWRI 259 (273)
T ss_dssp SBCCT
T ss_pred CCCcc
Confidence 55665
|
| >d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Probab=96.56 E-value=0.014 Score=53.90 Aligned_cols=105 Identities=15% Similarity=0.158 Sum_probs=67.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++.++.|+++|++.||| + +.+ .++++.++..||+|+|.+-... ...
T Consensus 16 ~~Vv~llks~~i~~VRl------Y-~~d-------------~~vL~A~~~~gi~v~lGv~n~~--------------l~~ 61 (306)
T d1ghsa_ 16 SDVVQLYRSKGINGMRI------Y-FAD-------------GQALSALRNSGIGLILDIGNDQ--------------LAN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE------S-SCC-------------HHHHHHTTTSCCEEEEECCGGG--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE------e-CCC-------------HHHHHHHHhcCCEEEEEeccch--------------hhh
Confidence 45567788999999998 1 221 1356677889999999763210 000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
+ ..+.+...+.++.....|.....|-++-+-||-... ....+...++.+.+++++.+-.
T Consensus 62 ~-~~~~~~a~~~v~~~i~~~~~~~~I~~I~VGNEvl~~--~~~~l~~a~~~i~~al~~~gl~ 120 (306)
T d1ghsa_ 62 I-AASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGG--ATQSILPAMRNLNAALSAAGLG 120 (306)
T ss_dssp H-HHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCCGG--GGGGHHHHHHHHHHHHHHHTCT
T ss_pred h-ccCHHHHHHHHHHHHHhhCCCceEEEEEecceeccC--CcchhHHHHHHHHHHHHHCCCC
Confidence 0 122344444444444566666678889999997632 3457788888888888887643
|
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=96.55 E-value=0.017 Score=53.55 Aligned_cols=107 Identities=20% Similarity=0.185 Sum_probs=66.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++.++.|+++|++.||| . +++ + ++++.++..||+|+|-+-... ...
T Consensus 16 ~~vv~lLk~~~i~~IRl------Y-~~d---~----------~vL~A~~~tgi~v~lGv~n~~--------------l~~ 61 (312)
T d2cyga1 16 SEVVSLYKSNNIARMRL------Y-DPN---Q----------AALQALRNSNIQVLLDVPRSD--------------VQS 61 (312)
T ss_dssp HHHHHHHHHTTCCEEEE------S-SCC---H----------HHHHHHTTSCCEEEEEECHHH--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE------e-CCC---H----------HHHHHHHhcCCEEEEeeccch--------------hhh
Confidence 45677889999999998 1 221 1 356677889999999873210 000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
| ..+.+...+.++.....|.....|-++-+-||+.............++....++++.+-.
T Consensus 62 ~-~~~~~~a~~wv~~~v~~~~~~~~I~~IaVGNE~l~~~~~~~~~lpa~~~~~~aL~~~g~~ 122 (312)
T d2cyga1 62 L-ASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQ 122 (312)
T ss_dssp H-HHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCT
T ss_pred c-cCCHHHHHHHHHHHHhccCCCceEEEEEecCEEeeCCcCchhhcccHHHHHHHHHHCCCC
Confidence 0 011123334444444567666778888999998754333344456677788888887644
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.50 E-value=0.0041 Score=59.71 Aligned_cols=139 Identities=14% Similarity=0.181 Sum_probs=76.7
Q ss_pred HHHHHHHhCCCCEEEe-cCccccccC--CCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEcC---CCCCCCCCCC
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIAND--PTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDLH---AAPGSQNGNE 229 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~~--~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDlH---~~pg~qng~~ 229 (436)
+-++.|+++|+|+|-| ||.-..... +..+..| + =+..+.|+++|+.|.++||+||||+= ..+.+.. +.
T Consensus 38 ~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G~~~d~~~lv~~aH~~gi~VilD~V~NH~~~~~~~-~~ 116 (420)
T d2bhua3 38 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNY-LS 116 (420)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCC-HH
T ss_pred HhHHHHHHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHhccccccccccccccCCCCcc-cc
Confidence 3489999999999997 542110000 0000011 1 15789999999999999999999984 3322100 00
Q ss_pred CCCC---------C-CCCCCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhh
Q 013777 230 HSAT---------R-DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKY 298 (436)
Q Consensus 230 ~sg~---------~-~~~~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~ 298 (436)
.... . .....|. +..++..++.++...+.|+ |-||=+=--+.. ..+....+.+++.++|++.
T Consensus 117 ~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~G----VDGfR~D~~~~l---~~~~~~~~~~~~~~~~~~~ 189 (420)
T d2bhua3 117 SYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYH----FDGLRLDATPYM---TDDSETHILTELAQEIHEL 189 (420)
T ss_dssp HHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHC----CSEEEETTGGGC---CCCSSSCHHHHHHHHHHTT
T ss_pred ccccccccccccccccccccccChHHHHHHHHHhheeeeccc----ccEEEEeeeeee---ccccccccHHHHHHHHHhh
Confidence 0000 0 0001122 5667777777777776552 223322111110 0011123566778899999
Q ss_pred CCCeEEEEe
Q 013777 299 TSTAYVIMS 307 (436)
Q Consensus 299 ~p~~~Viv~ 307 (436)
+|+.+++.+
T Consensus 190 ~p~~~~i~E 198 (420)
T d2bhua3 190 GGTHLLLAE 198 (420)
T ss_dssp CSCCEEEEE
T ss_pred cCCceeeec
Confidence 999888765
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.42 E-value=0.018 Score=54.04 Aligned_cols=136 Identities=13% Similarity=0.207 Sum_probs=75.6
Q ss_pred HHHHHHHhCCCCEEEe-cCccccccCCCCCCCC-----ccchHHHHHHHHHHHHHcCCEEEEEc---CCCCCC-------
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIANDPTPPKPF-----VGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGS------- 224 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~~~~~~~~~-----~~~~l~~ld~~v~~a~~~Gi~VilDl---H~~pg~------- 224 (436)
+.++.|+++|+|+|-| |+.-.....+..+..| .-+..+.|+++|+.|.++||+||||+ |..+.+
T Consensus 57 ~kldyl~~LGv~~i~L~Pi~~~~~~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~ 136 (382)
T d1j0ha3 57 DHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVW 136 (382)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHH
T ss_pred HhHHHHHHcCCCEEEeCCCCcCCcccCCCcccccccCCCCCCHHHHHHHHHHhhhccceEEEEeeecccccccccchhhh
Confidence 4478999999999997 6521000000000000 01578999999999999999999998 333210
Q ss_pred -------CC--------CCCCC--CCCCCC--------CCCC-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC
Q 013777 225 -------QN--------GNEHS--ATRDGF--------QEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG 278 (436)
Q Consensus 225 -------qn--------g~~~s--g~~~~~--------~~w~-~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~ 278 (436)
.+ ..... ...... ..+. +..++..++.++...+.|+ |-||-+=.=++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~g----iDGfR~Da~~~--- 209 (382)
T d1j0ha3 137 KNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFD----IDGWRLDVANE--- 209 (382)
T ss_dssp HHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHC----CCEEEETTGGG---
T ss_pred ccCCccccCCccccccccccccccccccccccCCCCcccccChHHHHHHHHHHHHhHhhhcc----ccEEEecchhh---
Confidence 00 00000 000000 0111 4445666677777776663 33444332222
Q ss_pred CChhHHHHHHHHHHHHHHhhCCCeEEEEe
Q 013777 279 VALDTLKSYYKAGYDAVRKYTSTAYVIMS 307 (436)
Q Consensus 279 ~~~~~~~~~~~~~~~aIR~~~p~~~Viv~ 307 (436)
....+.++...++++..|+..++.+
T Consensus 210 ----~~~~~~~~~~~~~~~~~p~~~~i~e 234 (382)
T d1j0ha3 210 ----IDHEFWREFRQEVKALKPDVYILGE 234 (382)
T ss_dssp ----SCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ----cchhhhhhhhhhhhccCCCcccccc
Confidence 1245667777889999998876654
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=96.25 E-value=0.045 Score=51.04 Aligned_cols=58 Identities=22% Similarity=0.290 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCCEEEecCccccc----cCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA----NDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~----~~~~~~~~~~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|-|+=-+... ..+......+ -+..+.|+++|+.|.++||+||+|+
T Consensus 55 ~kLdylk~LGv~~i~l~Pi~~~~~~~gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~ 118 (382)
T d1ea9c3 55 DHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDA 118 (382)
T ss_dssp HTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEEC
T ss_pred HhhHHHHhCCCCEEEeCCCccCCCCCCCCcccccccccccCCHHHHHHHHHHHHhhcceEEEee
Confidence 34789999999999983212100 0010000011 1578999999999999999999999
|
| >d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
Probab=96.10 E-value=0.062 Score=49.34 Aligned_cols=104 Identities=18% Similarity=0.169 Sum_probs=66.8
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 239 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH~~pg~qng~~~sg~~~~~~~ 239 (436)
++.++.|+++|++.||| + +++ + ++++.++..||+|+|.+-... ...
T Consensus 16 ~~Vv~lLk~~~i~~IRl------Y-~~d---~----------~vL~A~~~~gi~v~lGv~n~~--------------l~~ 61 (306)
T d1aq0a_ 16 STVVSMFKSNGIKSMRL------Y-APN---Q----------AALQAVGGTGINVVVGAPNDV--------------LSN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE------S-SCC---H----------HHHHHHTTSCCEEEEEECGGG--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE------e-CCC---H----------HHHHHHHhcCCEEEEeccchh--------------hhh
Confidence 45577889999999998 2 221 1 366778899999999874210 000
Q ss_pred CChhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHHHHHHHHHHHHHhhCCC
Q 013777 240 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 301 (436)
Q Consensus 240 w~~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 301 (436)
+ ....++..+.++...+.| ....|-++-+-||.... ....+...++.+..++++.+-+
T Consensus 62 ~-~~~~~~~~~~v~~~v~~~-~~~~I~~i~VGNE~~~~--~~~~l~~a~~ni~~al~~~gl~ 119 (306)
T d1aq0a_ 62 L-AASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAGG--ATRNLVPAMKNVHGALVAAGLG 119 (306)
T ss_dssp H-HHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCCGG--GGGGHHHHHHHHHHHHHHTTCT
T ss_pred c-cCCHHHHHHHHHHhcccc-CCceEEEEEeccEeecC--CccchhhHHHHHHHHHHHCCCC
Confidence 0 123344445555555444 44578888899998742 3355667788888888877643
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=96.06 E-value=0.002 Score=60.42 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=40.1
Q ss_pred HHHHHHHHhCCCCEEEe-cCccccccC--CCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWIAND--PTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~~~~--~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
++-++.|+++|+|+|-| ||.-..... ...+..| + =+..+.|.++|+.|.++||+||||+=
T Consensus 44 ~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~V 111 (396)
T d1m7xa3 44 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWV 111 (396)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCcCcCcCCCcCcccCCHHHHHHHHHHHhhhhhhhhhccc
Confidence 44569999999999999 431000000 0000001 1 15789999999999999999999983
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=96.05 E-value=0.0043 Score=57.77 Aligned_cols=64 Identities=25% Similarity=0.349 Sum_probs=42.2
Q ss_pred hhhhcCCHHHHHHHHhCCCCEEEe-cCc---------cccc--cCCCCCC---CCc--cchHHHHHHHHHHHHHcCCEEE
Q 013777 153 HWDSYITDEDFKFLSSNGINAVRI-PVG---------WWIA--NDPTPPK---PFV--GGSSKVLDNAFDWAEKYGVKVI 215 (436)
Q Consensus 153 h~~~~ite~d~~~ia~~G~N~VRi-pv~---------~~~~--~~~~~~~---~~~--~~~l~~ld~~v~~a~~~Gi~Vi 215 (436)
+|+. | .+-++.||++|+++|-| |+. |+.. ..+..+. ..+ -+..+.|.++|+.|.++||+||
T Consensus 21 ~~~~-i-~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~~efk~lV~~~H~~GI~Vi 98 (390)
T d1ud2a2 21 HWNR-L-HDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVY 98 (390)
T ss_dssp HHHH-H-HHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred CHHH-H-HHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCCCCCCHHHHHHHHHHHHhcCCceE
Confidence 4543 3 34489999999999999 442 1100 0000000 011 1468999999999999999999
Q ss_pred EEc
Q 013777 216 VDL 218 (436)
Q Consensus 216 lDl 218 (436)
||+
T Consensus 99 lDv 101 (390)
T d1ud2a2 99 GDV 101 (390)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=96.04 E-value=0.016 Score=46.58 Aligned_cols=97 Identities=14% Similarity=0.102 Sum_probs=64.4
Q ss_pred CCcccccEEEE-ecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEe-CCceEEeecCCCCceEEEEecCCCCCceEEE
Q 013777 1 MSTKFQKYIAA-ESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAGYSETFQI 78 (436)
Q Consensus 1 ~s~~~~~~~~a-~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~ 78 (436)
|+...||||.. +++|+..+..--..-+.=.++++... ++.|.||.. .|+++.+++.. |..++.-.+.....+.|.|
T Consensus 6 ~N~~sGk~L~v~~~~~~~~~~~~~~~~~~~qqW~~~~~-~g~y~i~n~~sg~~l~~~~~s-g~~~~~~~~~~~~~qqW~l 83 (131)
T d1upsa2 6 RNRQTGKFLYIEENNDKVSYGDITLKNEKNAKWSKEYR-DGYTLLKNNETGEYLNIENQT-GYIEHGKVPKTWWSAQWSE 83 (131)
T ss_dssp EETTTCCEEECCTTCSSCEEECCCTTTTGGGCEEEEEE-TTEEEEEETTTCCEEECTTCC-SBCEEECCCTTCGGGCEEE
T ss_pred EEccCCcEEEEeCCCCcEEEeccccCCCcccEEEEEeC-CCEEEEEECCCCcEEEccCCC-CceEEEccCCCChhHeEEE
Confidence 34568999994 44555544332222233345677776 688999988 79999998743 4446666677778899999
Q ss_pred EEcCCCCcceEEec--cCCceEEEee
Q 013777 79 VRKDGDSSRVRLSA--SNGMFIQAIS 102 (436)
Q Consensus 79 ~~~~~~~~~v~i~~--~nG~~lq~~~ 102 (436)
+..+ + .++|+. ..|.+|++.+
T Consensus 84 ~~~g-g--~~~i~n~~~s~~~L~v~~ 106 (131)
T d1upsa2 84 VPVD-G--YTRFVNRWKPNMSIHTES 106 (131)
T ss_dssp EEET-T--EEEEEESSSTTCEEECTT
T ss_pred EecC-C--cEEEEEeccCCeEEEEec
Confidence 9865 2 244554 3488888764
|
| >d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.023 Score=44.27 Aligned_cols=90 Identities=12% Similarity=0.257 Sum_probs=68.5
Q ss_pred CCcccccEEEE-ec-CCCceEEEcCCCCCCcc-eEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEecCCCCCceEE
Q 013777 1 MSTKFQKYIAA-ES-GGGTIVVANRTSASGWE-TFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVSNTAGYSETFQ 77 (436)
Q Consensus 1 ~s~~~~~~~~a-~~-~g~~~~~anr~~~~~we-~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~ 77 (436)
+|+...+|+-. ++ ++ .|.++++..=+=| .|+|.. -++.|.|+++|++|+.-++ .|+ +.|.+..-|+
T Consensus 5 ~Sv~rkrYahls~~~~~--ei~vD~~vPWG~d~litL~f-~~grY~L~t~~~ryL~~~G-----~Lv---~~~~~~t~Ft 73 (119)
T d1dfca2 5 YSVTRKRYAHLSARPAD--EIAVDRDVPWGVDSLITLAF-QDQRYSVQTADHRFLRHDG-----RLV---ARPEPATGYT 73 (119)
T ss_dssp EETTTCCEEEECSTTSS--SEEEEESSCCTTTTCEEEEE-CSSSEEEEETTSCEECTTS-----CEE---SSCCGGGCEE
T ss_pred EcccceeEEEeCCCCCC--eEEEcCCCCcccCcEEEEEE-cCCEEEEEeCCCCeECCCC-----cCc---ccCCCCcEEE
Confidence 48899999965 33 43 7899998864334 466666 4789999999999999642 365 4577778899
Q ss_pred EEEcCCCCcceEEeccCCceEEEeeCe
Q 013777 78 IVRKDGDSSRVRLSASNGMFIQAISET 104 (436)
Q Consensus 78 ~~~~~~~~~~v~i~~~nG~~lq~~~~~ 104 (436)
+.-.+ +.|.+|+.+|+||...|..
T Consensus 74 le~~~---G~vA~rD~~G~yL~p~G~~ 97 (119)
T d1dfca2 74 LEFRS---GKVAFRDCEGRYLAPSGPS 97 (119)
T ss_dssp EEECS---SEEEEEESSSCBEEECSSS
T ss_pred EEEeC---CeEEEEcCCCCEEeccCCC
Confidence 88876 3599999999999988753
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=95.96 E-value=0.024 Score=53.07 Aligned_cols=58 Identities=19% Similarity=0.289 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEe-cCccccccCCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIANDPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|-| |+.-........+..| + -+..+.++++|+.|.++||+||+|+
T Consensus 57 ~kLdyl~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~ 120 (382)
T d1wzla3 57 DRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDA 120 (382)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HhhHHHHHCCCCEEEECCcCCCCcccCCccccccccccCCCCHHHHHHHHHHHHhcccceEeee
Confidence 4478999999999998 6521100001111001 1 1578999999999999999999995
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=95.91 E-value=0.0093 Score=55.50 Aligned_cols=59 Identities=25% Similarity=0.304 Sum_probs=41.9
Q ss_pred HHHHHHHHhCCCCEEEecCccccccC-----------CCCCCCCc----cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIAND-----------PTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~-----------~~~~~~~~----~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+.++.||++|+++|=|+-.+..... +..+..|. =+..+.|+++|+.|.++||+||||+
T Consensus 40 ~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy~vd~~~Gt~~df~~LV~~aH~~GI~VIlD~ 113 (357)
T d1gcya2 40 RQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDV 113 (357)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhcccCccCCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 45689999999999999653321110 00011111 1578999999999999999999998
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=95.72 E-value=0.0096 Score=54.77 Aligned_cols=59 Identities=17% Similarity=0.168 Sum_probs=40.4
Q ss_pred HHHHHHHhCCCCEEEecCccccc----cCCCCC---CCCccchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIA----NDPTPP---KPFVGGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~----~~~~~~---~~~~~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+-++.|+++|+|+|-|+=-+... .++... .|-.-|.++.|+++|+.|.++||+||||+-
T Consensus 25 ~kLdyl~~lGv~~i~L~Pi~~~~~~~gY~~~d~~~id~~~~G~~~~f~~lv~~~H~~gi~VilD~V 90 (347)
T d1ht6a2 25 GKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIV 90 (347)
T ss_dssp TTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhHHHHHHcCCCEEEECCCCcCCCCCCCCccCcCcCCcccCCCHHHHHHHHHHHhhcceEEeeecc
Confidence 34899999999999993211110 011110 110126789999999999999999999994
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.71 E-value=0.0087 Score=56.80 Aligned_cols=60 Identities=22% Similarity=0.171 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccC---------CCCCCC------Cc--cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIAND---------PTPPKP------FV--GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~---------~~~~~~------~~--~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
++.++.|+++|+|+|-|+=-+..... .....+ .+ =+..+.|+++|+.|.++||+||||+=
T Consensus 27 ~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~df~~LV~~aH~~GIkVIlDvV 103 (393)
T d1hvxa2 27 ANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (393)
T ss_dssp HHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56789999999999999432211100 000000 11 14688999999999999999999973
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=95.57 E-value=0.0069 Score=56.70 Aligned_cols=60 Identities=20% Similarity=0.358 Sum_probs=42.3
Q ss_pred CCHHHHHHHHhCCCCEEEecCcc--------ccccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 158 ITDEDFKFLSSNGINAVRIPVGW--------WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 158 ite~d~~~ia~~G~N~VRipv~~--------~~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
|.++-.+.|+++|+++|=||=.. |...++... ..++ |..+.|+++|+.|.++||+||||+
T Consensus 16 i~~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~dy-~vd~~~Gt~~dfk~LV~~aH~~GI~VilDv 85 (354)
T d1g94a2 16 VAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSY-ELQSRGGNRAQFIDMVNRCSAAGVDIYVDT 85 (354)
T ss_dssp HHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCcc-eeCCCCCCHHHHHHHHHHHhccCceeEEEe
Confidence 33445567999999999995432 222233221 1111 578999999999999999999998
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=95.51 E-value=0.086 Score=49.78 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=39.2
Q ss_pred HHHHHHHhCCCCEEEe-cCc--------cccccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVG--------WWIANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~--------~~~~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|-| ||. +| ..++.. ..|- =+..+.|+++|+.|.++||+||||+
T Consensus 57 ~kLdyl~~LGv~~I~l~Pi~~~~~~~~~~~-GY~~~d~~~vd~~-~Gt~~df~~lv~~~H~~Gi~VilD~ 124 (422)
T d1h3ga3 57 DHLDYIAGLGFTQLWPTPLVENDAAAYSYH-GYAATDHYRIDPR-YGSNEDFVRLSTEARKRGMGLIQDV 124 (422)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCSSCGGG-CCSCSEEEEECTT-TCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhHHHHHHCCCCEEEeCCcccCCCCCCCCC-CCCccccCCcccc-cCCHHHHHHHHHHHHHhCccccccC
Confidence 3488999999999997 441 11 000100 0110 1578999999999999999999999
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=95.42 E-value=0.073 Score=49.85 Aligned_cols=58 Identities=26% Similarity=0.396 Sum_probs=40.3
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc-----ccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI-----ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~-----~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+|+|-| ||.-.. ..++......++ +..+.|+++|+.|.++||+||||+
T Consensus 33 ~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dlk~lv~~~h~~gi~VilD~ 98 (400)
T d1eh9a3 33 RKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDV 98 (400)
T ss_dssp HTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCcccCCHHHHHHHHHHHHhcCCceeeec
Confidence 4489999999999999 442000 011111101111 578999999999999999999999
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=95.36 E-value=0.0099 Score=57.71 Aligned_cols=56 Identities=25% Similarity=0.476 Sum_probs=39.9
Q ss_pred HHHHHHhCCCCEEEe-cCc---------------------cccccCCCCCCC-C-----ccchHHHHHHHHHHHHHcCCE
Q 013777 162 DFKFLSSNGINAVRI-PVG---------------------WWIANDPTPPKP-F-----VGGSSKVLDNAFDWAEKYGVK 213 (436)
Q Consensus 162 d~~~ia~~G~N~VRi-pv~---------------------~~~~~~~~~~~~-~-----~~~~l~~ld~~v~~a~~~Gi~ 213 (436)
-++.|+++|+|+|=| ||. ||.. +....+| | ..+.++.|+++|+.|.++||+
T Consensus 48 kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~~y~GY~~~-d~~~vdp~y~~~~~~~Gt~~d~~~LV~~aH~~GIr 126 (475)
T d1bf2a3 48 KASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTE-NYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIK 126 (475)
T ss_dssp THHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBS-CSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCE
T ss_pred hhHHHHHcCCCEEEeCCCCcCCCcccccccccccCcCCCCCCcc-cCCCcCcccccCCCCCCCHHHHHHHHHHHHhcCcE
Confidence 378999999999999 442 2211 1111111 1 126789999999999999999
Q ss_pred EEEEc
Q 013777 214 VIVDL 218 (436)
Q Consensus 214 VilDl 218 (436)
||+|+
T Consensus 127 VilD~ 131 (475)
T d1bf2a3 127 VYMDV 131 (475)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99998
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=95.32 E-value=0.011 Score=55.44 Aligned_cols=60 Identities=27% Similarity=0.272 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccc-------cCCC---CCC------CCcc--chHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIA-------NDPT---PPK------PFVG--GSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~-------~~~~---~~~------~~~~--~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
.+.++.|+++|+|+|=|+=-+... .++. ... ..++ +..+.|+++|+.|.++||+||||+-
T Consensus 31 ~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d~~~LV~~aH~~GikVIlD~V 108 (361)
T d1mxga2 31 RSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVV 108 (361)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCEEEeCcCeeCCCCCCCCCCCcccccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEee
Confidence 566899999999999984222110 0100 000 0111 4689999999999999999999984
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=95.28 E-value=0.012 Score=55.86 Aligned_cols=58 Identities=26% Similarity=0.248 Sum_probs=40.0
Q ss_pred HHHHHHHhCCCCEEEecCccccccC-C--------CCCCC------Ccc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGWWIAND-P--------TPPKP------FVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~~~~~~-~--------~~~~~------~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.++.|+++|+++|-|+=-+..... . ..... .++ |..+.|.++|+.|.++||+||+|+
T Consensus 25 ~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~df~~Lv~~~H~~Gi~VilD~ 99 (393)
T d1e43a2 25 NDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (393)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCcCccCCCCCCCCCCcccCcccccccccCccCCCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 5589999999999999322211100 0 00000 111 468999999999999999999999
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=95.24 E-value=0.012 Score=55.53 Aligned_cols=58 Identities=26% Similarity=0.338 Sum_probs=39.7
Q ss_pred HHHHHHhCCCCEEEe-cCccccccCCCCCCCC---cc--chHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 162 DFKFLSSNGINAVRI-PVGWWIANDPTPPKPF---VG--GSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 162 d~~~ia~~G~N~VRi-pv~~~~~~~~~~~~~~---~~--~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
-++.|+++|+|+|-| |+.-........+..| ++ +..+.|+++|+.|.++||+||+|+=
T Consensus 28 kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h~~gi~VilD~V 91 (391)
T d1lwha2 28 AVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (391)
T ss_dssp THHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hhHHHHHcCCCEEEECCCCCCCCCCCCCccCCCCcCcccCCHHHHHHHHHHHHhcCCEEeeccc
Confidence 378999999999998 5521000001111111 11 5789999999999999999999983
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=95.18 E-value=0.0061 Score=58.15 Aligned_cols=57 Identities=25% Similarity=0.324 Sum_probs=38.8
Q ss_pred HHHH--HHHhCCCCEEEe-cCcccc----------------ccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFK--FLSSNGINAVRI-PVGWWI----------------ANDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~--~ia~~G~N~VRi-pv~~~~----------------~~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++ .|+++|+|+|-| |+.-.. ..++.. .+|- =+..+.|+++|+.|.++||+||||+
T Consensus 59 ~kLd~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~-~Gt~~dfk~LV~~aH~~Gi~VilD~ 137 (406)
T d3bmva4 59 NKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPY-FGSFTDFQNLINTAHAHNIKVIIDF 137 (406)
T ss_dssp HHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTT-TCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhcCHHHHHHcCCCEEEECCcccccccccCCCCCCCChhhcCcccccccccCcc-cccHHHHHHHHHHHHhccccceeee
Confidence 3465 799999999999 552100 000000 0110 1578999999999999999999999
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=95.13 E-value=0.014 Score=56.48 Aligned_cols=55 Identities=22% Similarity=0.339 Sum_probs=38.3
Q ss_pred HHHHHhCCCCEEEe-cCccccccC--CCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 163 FKFLSSNGINAVRI-PVGWWIAND--PTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 163 ~~~ia~~G~N~VRi-pv~~~~~~~--~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
++.|+++|+|+|-| ||. ..-.. ...+..| + =+..+.|+++|+.|.++||+||||+
T Consensus 37 LdYLk~LGv~~I~l~Pi~-~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (479)
T d1uoka2 37 LDYLKELGIDVIWLSPVY-ESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (479)
T ss_dssp HHHHHHHTCCEEEECCCE-ECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHcCCCEEEECCCc-CCCCCCCCcCccccCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 78999999999998 441 10000 0000011 1 1578999999999999999999998
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=95.09 E-value=0.015 Score=56.33 Aligned_cols=57 Identities=23% Similarity=0.347 Sum_probs=39.2
Q ss_pred HHHHHHHhCCCCEEEe-cCcccccc--CCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIAN--DPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~--~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|-| ||. ..-. ....+..| + =|..+.|+++|+.|.++||+||||+
T Consensus 35 ~kLdyLk~LGv~~I~L~Pi~-~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (478)
T d1m53a2 35 EKLDYLKSLGIDAIWINPHY-DSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 99 (478)
T ss_dssp HTHHHHHHHTCCEEEECCCE-ECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCC-CCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 3488999999999998 331 1000 00000001 1 1578999999999999999999999
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=95.00 E-value=0.016 Score=54.88 Aligned_cols=57 Identities=19% Similarity=0.301 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCCEEEe-cCccccccCCC-CC---CCC--------c--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIANDPT-PP---KPF--------V--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~~~~-~~---~~~--------~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|-| || +....... +. ..| + -+..+.|+++|+.|.++||+||||+
T Consensus 47 ~kLdyL~~LGv~~I~L~Pi-~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~ 118 (381)
T d2aaaa2 47 DHLDYIEGMGFTAIWISPI-TEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (381)
T ss_dssp HTHHHHHTTTCCEEEECCC-EEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCC-ccCCccCCCCCCCCcccccccccccccccCCHHHHHHHHHHHhhhhhcccccc
Confidence 4589999999999998 44 21110000 00 011 0 2578999999999999999999998
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=94.99 E-value=0.017 Score=54.66 Aligned_cols=60 Identities=28% Similarity=0.330 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCC----CCC-----------Ccc--chHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTP----PKP-----------FVG--GSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~----~~~-----------~~~--~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
++.++.|+++|+|+|=|+=-+........ ... .++ +..+.|+++|+.|.++||+||||+-
T Consensus 24 ~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df~~Lv~~aH~~GIkVilDvV 100 (394)
T d2d3na2 24 NSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDVV 100 (394)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 56789999999999998422211100000 001 111 4689999999999999999999993
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=94.98 E-value=0.0094 Score=56.84 Aligned_cols=57 Identities=25% Similarity=0.336 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCCEEEe-cCccccccCC-----CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIANDP-----TPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~~~-----~~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|=| ||. ...... .....|. =+..+.|+++|+.|.++||+||||+
T Consensus 56 ~kLdyl~~LGv~~I~L~Pi~-~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~ 128 (407)
T d1qhoa4 56 QKLPYLKQLGVTTIWLSPVL-DNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (407)
T ss_dssp HTHHHHHHHTCCEEEECCCE-EECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCccc-cCCcccCCCCCCCCCceeeeecCCCCCCCCCHHHHHHHHHHhhhcccceeecc
Confidence 4488999999999999 331 100000 0000111 1578999999999999999999998
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=94.94 E-value=0.018 Score=54.35 Aligned_cols=59 Identities=17% Similarity=0.280 Sum_probs=40.4
Q ss_pred HHHHHHHhCCCCEEEe-cCccccccC---CCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIAND---PTPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~~---~~~~~~~~----------~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+-++.|+++|+|+|=| |+....-.. ..+..+|. -+..+.|+++|+.|.++||+||||+-
T Consensus 47 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 119 (381)
T d2guya2 47 DKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVV 119 (381)
T ss_dssp HTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCcccccccccccCCCCHHHHHHHHHHHHhhccceeeecc
Confidence 4489999999999998 442110000 00111111 25789999999999999999999984
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=94.55 E-value=0.013 Score=58.24 Aligned_cols=62 Identities=19% Similarity=0.190 Sum_probs=41.7
Q ss_pred HHHHHHHhCCCCEEEe-cCcccccc--CCCC-----------CCCC------c-cchHHHHHHHHHHHHHcCCEEEEEc-
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWIAN--DPTP-----------PKPF------V-GGSSKVLDNAFDWAEKYGVKVIVDL- 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~~~--~~~~-----------~~~~------~-~~~l~~ld~~v~~a~~~Gi~VilDl- 218 (436)
+-++.|+++|+|+|=| ||.-..-. .+.. .+|. . -+..+.|+++|+.|.++||+||||+
T Consensus 124 ~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI~VIlDvV 203 (572)
T d1gjwa2 124 LLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDFI 203 (572)
T ss_dssp HTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhhHHHHHcCCCEEEeCCcccCccccCCCCCCCCCCccCCCCCCcccccccccCCCCHHHHHHHHHHHHhcCcEEEEEee
Confidence 3488999999999998 44210000 0000 0110 0 1568999999999999999999999
Q ss_pred --CCCC
Q 013777 219 --HAAP 222 (436)
Q Consensus 219 --H~~p 222 (436)
|...
T Consensus 204 ~NHts~ 209 (572)
T d1gjwa2 204 PRTAAR 209 (572)
T ss_dssp TTEEET
T ss_pred eccccc
Confidence 6543
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.55 E-value=0.018 Score=54.64 Aligned_cols=57 Identities=21% Similarity=0.414 Sum_probs=40.1
Q ss_pred HHHHHHHhCCCCEEEecCcc------------ccccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRIPVGW------------WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRipv~~------------~~~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-.+.|+++|+++|=||=.. |...+|.... .++ |..+.|+++|+.|.++||+||||+
T Consensus 27 e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~-v~~~~Gt~~dfk~Lv~~aH~~GI~VIlDv 97 (403)
T d1hx0a2 27 ECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYK-LCTRSGNENEFRDMVTRCNNVGVRIYVDA 97 (403)
T ss_dssp HHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSC-SCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCCCc-cCCCCCCHHHHHHHHHHHHhcCCEEEEEE
Confidence 33456999999999996422 2222221111 111 578999999999999999999999
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=94.08 E-value=0.028 Score=52.42 Aligned_cols=57 Identities=28% Similarity=0.511 Sum_probs=39.8
Q ss_pred HHHHHHHHhCCCCEEEe-cCccccc---------------cCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRI-PVGWWIA---------------NDPTP---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRi-pv~~~~~---------------~~~~~---~~~~~~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+.++.|+++|+|+|=| |+. ... .++.. .++. =+..+.|+++|+.|+++||+||||+
T Consensus 20 ~~~ldyl~~lGv~aIwl~Pi~-~~~~~~~~~~~~~~~y~gY~~~dy~~vd~~-~Gt~~df~~LV~~aH~~Gi~VilD~ 95 (344)
T d1ua7a2 20 KHNMKDIHDAGYTAIQTSPIN-QVKEGNQGDKSMSNWYWLYQPTSYQIGNRY-LGTEQEFKEMCAAAEEYGIKVIVDA 95 (344)
T ss_dssp HHTHHHHHHTTCSEEEECCCE-EECCTGGGCCBGGGGGGGGCEEEEEEEETT-TEEHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHhHHHHHHcCCCEEEeCCCe-eCCCcCCCCCCCCCCccccccccCCCCCCC-CCCHHHHHHHHHHhcccceeEeecc
Confidence 35578999999999997 442 110 01100 0010 1578999999999999999999999
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=93.34 E-value=0.052 Score=53.19 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHH-HHcCCEEEEEc
Q 013777 196 SSKVLDNAFDWA-EKYGVKVIVDL 218 (436)
Q Consensus 196 ~l~~ld~~v~~a-~~~Gi~VilDl 218 (436)
.++.++++|+.| +++||+||||+
T Consensus 178 ~l~Efk~lV~a~~H~rGIkVIlD~ 201 (563)
T d2fhfa5 178 RIKEFRTMIQAIKQDLGMNVIMDV 201 (563)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred HHHHHHHHHHHHhhccCceeeecC
Confidence 478899999876 78899999998
|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=92.98 E-value=0.066 Score=51.30 Aligned_cols=60 Identities=22% Similarity=0.522 Sum_probs=49.1
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~pg 223 (436)
+..++.||++|+.-|=++| ||-..+...|..| .+....++++.+++.||+ ||+..|...|
T Consensus 31 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 92 (490)
T d1wdpa1 31 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQY---DWRAYRSLLQLVQECGLTLQAIMSFHQCGG 92 (490)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCcc---ChHHHHHHHHHHHHcCCeEEEEEeecccCC
Confidence 6889999999999999999 6766666556666 477888899999999997 5678887644
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=92.98 E-value=0.031 Score=52.51 Aligned_cols=57 Identities=19% Similarity=0.299 Sum_probs=39.2
Q ss_pred HHHH-HHHhCCCCEEEecCccc----------cccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFK-FLSSNGINAVRIPVGWW----------IANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~-~ia~~G~N~VRipv~~~----------~~~~~~~~~~~~--~~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+.+. .|+++|+++|=||=... ...++... ..+ =|..+.|+++|+.|.++||+||||+
T Consensus 26 ~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY-~id~~~Gt~~df~~LV~~aH~~GI~VilDv 95 (378)
T d1jaea2 26 DECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDESAFTDMTRRCNDAGVRIYVDA 95 (378)
T ss_dssp HHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCcccccCCCCCCCCccccCCccc-eeCCCCCCHHHHHHHHHHHHhcCceeeeee
Confidence 4445 59999999999843221 11122111 011 1578999999999999999999998
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=92.69 E-value=0.058 Score=50.53 Aligned_cols=55 Identities=20% Similarity=0.274 Sum_probs=36.4
Q ss_pred HHHhCCCCEEEe-cCccccccCCCCCCCC---c--cchHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 165 FLSSNGINAVRI-PVGWWIANDPTPPKPF---V--GGSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 165 ~ia~~G~N~VRi-pv~~~~~~~~~~~~~~---~--~~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
.||++|+|+|-| |+.--....+..+..| + =+..+.|+++|+.|.++||+||+|+=
T Consensus 43 ~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G~~~dlk~lv~~~H~~Gi~VilD~V 103 (409)
T d1wzaa2 43 TIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (409)
T ss_dssp CCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHhhcCccEEEECCCCCCCCCCCcCcccCCCcCcccCCHHHHHHHHHHHHhcCCEEEEecc
Confidence 358999999999 5521000000111111 1 15789999999999999999999994
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=92.57 E-value=0.093 Score=52.20 Aligned_cols=58 Identities=12% Similarity=0.218 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCEEEe-cCcccc------ccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 161 EDFKFLSSNGINAVRI-PVGWWI------ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~~~------~~~~~~~~~~~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
+-++.|+++|+|+|-| ||.-.. ...+......++ |.++.|+++|+.|.++||+||||+
T Consensus 117 ~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lGt~edl~~Lv~~aH~rGI~VilD~ 183 (554)
T d1g5aa2 117 DKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (554)
T ss_dssp TTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3478999999999998 542100 000100000111 578999999999999999999999
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=92.46 E-value=0.079 Score=50.84 Aligned_cols=60 Identities=25% Similarity=0.592 Sum_probs=48.7
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~pg 223 (436)
+..++.||++|+.-|=++| ||-..+...|..| .+....++++.+++.||+ ||+..|..-|
T Consensus 37 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 98 (498)
T d1fa2a_ 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQY---DWSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCcc---CcHHHHHHHHHHHHcCCeeEEEEeecccCC
Confidence 6789999999999999999 6766666555666 477888899999999997 5678886543
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=92.12 E-value=0.081 Score=50.79 Aligned_cols=60 Identities=25% Similarity=0.564 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~--VilDlH~~pg 223 (436)
+..++.||++|+.-|=++| ||-..+...|..| .+...+++++.+++.||+ ||+..|..-|
T Consensus 30 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 91 (500)
T d1b1ya_ 30 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAY---DWSAYKQLFELVQKAGLKLQAIMSFHQCGG 91 (500)
T ss_dssp HHHHHHHHHTTCCEEEEEE-ETTTGGGGSTTCC---CCHHHHHHHHHHHHHTCEEEEEEECSCBSS
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEeecccCC
Confidence 6889999999999999999 6666665555566 478888999999999997 5678886533
|
| >d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.18 E-value=0.21 Score=38.55 Aligned_cols=67 Identities=16% Similarity=0.234 Sum_probs=48.3
Q ss_pred ccccEEEEecCCCceEEEcCCCCCCcceEEEEEecCCeEEEEEeCCceEEeecCCCCceEEEEe-cCCCCCceEEEEE
Q 013777 4 KFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNETFYNFRVNNKQFIGLENQGQGNGLVAVS-NTAGYSETFQIVR 80 (436)
Q Consensus 4 ~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~-~~~~~~e~f~~~~ 80 (436)
.+||||.. -| .|| +..+... .|.|-.-. +.++||-.+|+|++..+ +.+.|.+.+ +.+|.-|-|.|.+
T Consensus 51 ~~~ryL~~--~G--~Lv-~~~~~~t--~Ftle~~~-G~vA~rD~~G~yL~p~G--~~g~Lk~gk~~~~gkdElF~Le~ 118 (119)
T d1dfca2 51 ADHRFLRH--DG--RLV-ARPEPAT--GYTLEFRS-GKVAFRDCEGRYLAPSG--PSGTLKAGKATKVGKDELFALEQ 118 (119)
T ss_dssp TTSCEECT--TS--CEE-SSCCGGG--CEEEEECS-SEEEEEESSSCBEEECS--SSCCEEECSCSSCCSTTCEEEEE
T ss_pred CCCCeECC--CC--cCc-ccCCCCc--EEEEEEeC-CeEEEEcCCCCEEeccC--CCceEEcCCCCCCCceeEEEeec
Confidence 57899984 22 444 4444443 35555554 66999999999999985 366799986 4599999999876
|
| >d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=89.33 E-value=2.4 Score=33.00 Aligned_cols=100 Identities=12% Similarity=0.181 Sum_probs=64.7
Q ss_pred CcccccEEEEecCCCceEEEcCCCCCCcceEEEEEecC-CeEEEEEe-CCceEEeecCCCCceEEEEecCCCCCceEEEE
Q 013777 2 STKFQKYIAAESGGGTIVVANRTSASGWETFRLWRVNE-TFYNFRVN-NKQFIGLENQGQGNGLVAVSNTAGYSETFQIV 79 (436)
Q Consensus 2 s~~~~~~~~a~~~g~~~~~anr~~~~~we~f~~~~~~~-~~~~~~~~-~~~~~~~~~~g~~~~~~a~~~~~~~~e~f~~~ 79 (436)
++-.+|+|+....| +.|+.-.-.-+.-..|+|....+ +.|.++.. .++.+.+.+ +.|..|+--...-++...|.|.
T Consensus 9 ~~n~~k~l~~~~n~-~~v~~w~~~~~~nQ~W~~~~~~~~~~y~i~~~~~~~~l~~~~-~~g~~v~~~~~~~~~~Q~W~i~ 86 (138)
T d1qxma2 9 QLNSDRFLSKNLNS-QIIVLWQWFDSSRQKWIIEYNETKSAYTLKCQENNRYLTWIQ-NSNNYVETYQSTDSLIQYWNIN 86 (138)
T ss_dssp TTCTTCEEEECTTS-SBEEEECCCCCGGGCEEEEEETTTTEEEEEETTTTEEEEECC-STTCBEEEECCCSSGGGCEEEE
T ss_pred eeCCCEEEEEccCC-ceEEEECCCCCcccCEEEEECCCcCEEEEEeCCCCCEEcccc-CCCcEEEEEcCCCChhcEEEEe
Confidence 35678999986544 45555555566788999998875 66899988 566666654 3344455555555567788888
Q ss_pred EcCCCCcceEEec-c-CCceEEEeeC
Q 013777 80 RKDGDSSRVRLSA-S-NGMFIQAISE 103 (436)
Q Consensus 80 ~~~~~~~~v~i~~-~-nG~~lq~~~~ 103 (436)
+.+......+|+. . .++-|.+.+.
T Consensus 87 ~~~~~~g~y~i~~~~~s~~~Ldv~~~ 112 (138)
T d1qxma2 87 YLDNDASKYILYNLQDTNRVLDVYNS 112 (138)
T ss_dssp EETTEEEEEEEEETTCTTEEEEEGGG
T ss_pred ccccCCCcEEEEEecCCCccEEECCC
Confidence 7654334455654 2 4667766543
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=88.54 E-value=8.7 Score=34.89 Aligned_cols=135 Identities=19% Similarity=0.188 Sum_probs=77.5
Q ss_pred HHHHHHHHhCCCCEEEecCcc---ccccCCCCC-----CCC------ccc--hHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 013777 160 DEDFKFLSSNGINAVRIPVGW---WIANDPTPP-----KPF------VGG--SSKVLDNAFDWAEKYGVKVIVDLHAAPG 223 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~---~~~~~~~~~-----~~~------~~~--~l~~ld~~v~~a~~~Gi~VilDlH~~pg 223 (436)
.+.++.|+...+|.+-+.+.- |.+.-+.-| +.+ ..+ ..+.+.++++.|+++||.||..+-. ||
T Consensus 21 ~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~yT~~di~~iv~ya~~rgI~viPEid~-Pg 99 (356)
T d1jaka1 21 KRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVPEIDM-PG 99 (356)
T ss_dssp HHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEEECCC-SS
T ss_pred HHHHHHHHHcCCeEEEEEEecCCCcceeecCCchhhhccCccccCCCCCCccCHHHHHHHHHHHHHcCCeEeecCCC-cc
Confidence 455777899999999887742 212111100 000 011 4788999999999999999998743 33
Q ss_pred CCCC---------------CCCCCCCCCCCCCC---hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChhHHH
Q 013777 224 SQNG---------------NEHSATRDGFQEWG---DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLK 285 (436)
Q Consensus 224 ~qng---------------~~~sg~~~~~~~w~---~~~~~~~~~~~~~lA~ry~~~~~v~g~eL~NEP~~~~~~~~~~~ 285 (436)
.... ...++...+..... +...+-..++++.++.-|.+.---+| .-|.. ....+.+.
T Consensus 100 H~~~~~~~~pel~~~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lfp~~~~HiG---gDE~~--~~~~~~~~ 174 (356)
T d1jaka1 100 HTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPGRYLHIG---GDEAH--STPKADFV 174 (356)
T ss_dssp SCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTCCSSEEECC---CCCCT--TSCHHHHH
T ss_pred hhHHHHHhCccccccCCCCccccccCCCCcccccCchHHHHHHHHHHHHHHHhccccEEEec---ccccc--cchHHHHH
Confidence 2100 00000000000011 34445555777788777754322233 24443 23467788
Q ss_pred HHHHHHHHHHHhhCC
Q 013777 286 SYYKAGYDAVRKYTS 300 (436)
Q Consensus 286 ~~~~~~~~aIR~~~p 300 (436)
.|.+++.+.|++.+.
T Consensus 175 ~f~~~~~~~v~~~gk 189 (356)
T d1jaka1 175 AFMKRVQPIVAKYGK 189 (356)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999998764
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=87.45 E-value=10 Score=34.60 Aligned_cols=174 Identities=11% Similarity=0.051 Sum_probs=96.1
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEcCCCC-CCCCCCCCCCCCCCCCCCC------hhHHHHHH---HHHHHHHHHhCCCC--
Q 013777 196 SSKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEHSATRDGFQEWG------DSNVADTV---AVIDFLAARYANRP-- 263 (436)
Q Consensus 196 ~l~~ld~~v~~a~~~Gi~VilDlH~~p-g~qng~~~sg~~~~~~~w~------~~~~~~~~---~~~~~lA~ry~~~~-- 263 (436)
..+.+.+.+.++.+.|--|.+..|... .....+.. ...... ....+.+. +-+..+|...++..
T Consensus 86 ~~~~~~~~~~~~~~~Ggivt~~wH~~nP~~g~~~~~-----~~~~~~~~vlpg~~~~~~~~~~l~~ia~~a~~Lk~~~~~ 160 (366)
T d2bvya2 86 NIALFADYIRKADAIGGVNTVSAHVENFVTGGSFYD-----TSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDGT 160 (366)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEECCCCCTTTSCCTTC-----CTTCHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSC
T ss_pred hHHHHHHHHHHhhccCCEEEEEEecCCCCCCCcccC-----CchhHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhccCC
Confidence 566677777778888999999999642 11111110 000000 12234444 44445555666532
Q ss_pred -ceeEEEeecCCCCC-------CCChhHHHHHHHHHHHHHHhh-CCCeEEEEeCCCC--CCChhhhhccCCCCC-cEEEE
Q 013777 264 -SLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKY-TSTAYVIMSNRLG--PADHKELLSFASGLS-RVVID 331 (436)
Q Consensus 264 -~v~g~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~-~p~~~Viv~~~~~--~~~~~~~~~~~~~~~-nvv~~ 331 (436)
.-+-|-++.|.... ..+++.++++++.+++.+|+. +-+.+|.+=+.-. ......++....+++ =.|+.
T Consensus 161 ~VPVl~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YPGDdyVDivG 240 (366)
T d2bvya2 161 LIPIVFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLG 240 (366)
T ss_dssp BCCEEEECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEEC
T ss_pred CccEEEeechhcCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCcceEEEeecCCCCCcccchhhhhCCCCCeEEEEE
Confidence 11338899998753 136788999999999999975 4566666533211 122233444333333 35777
Q ss_pred EeecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeecccccC
Q 013777 332 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEW 382 (436)
Q Consensus 332 ~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~~ 382 (436)
+-.|..... ......+... ...+..+.+..++|+.++|+|...
T Consensus 241 ~D~Y~~~~~-------~~~~~~~~~~-l~~~~~~a~~~~Kp~altE~G~~~ 283 (366)
T d2bvya2 241 LDTYDSTGS-------DAFLAGLVAD-LRMIAEIADEKGKVSAFTEFGVSG 283 (366)
T ss_dssp CEEEESSCC-------HHHHHHHHHH-HHHHHHHHHHHTCEECBCEEEETT
T ss_pred EeccCCCCC-------cchHHHHHHH-HHHHHHHHHhcCCcEEEeceeccC
Confidence 777854321 1112222211 123344444556779999999753
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=86.99 E-value=3.1 Score=32.72 Aligned_cols=100 Identities=11% Similarity=0.189 Sum_probs=64.7
Q ss_pred CcccccEEEEecC---CCceEEE---cCCCCCCcceEEEEEec--CCeEEEEEe-CCceEEeecCC--CCceEEEE---e
Q 013777 2 STKFQKYIAAESG---GGTIVVA---NRTSASGWETFRLWRVN--ETFYNFRVN-NKQFIGLENQG--QGNGLVAV---S 67 (436)
Q Consensus 2 s~~~~~~~~a~~~---g~~~~~a---nr~~~~~we~f~~~~~~--~~~~~~~~~-~~~~~~~~~~g--~~~~~~a~---~ 67 (436)
++..|++|-...+ -|++|+. |-+.......|++..++ .+.|.||.. .++++.+.++. .+..|+.- .
T Consensus 11 n~~s~~~ldv~~~~~~~G~~v~~w~~~~~~~~~nQ~W~~~~~~~~~~~y~i~n~~s~~~l~~~~~~~~~g~~v~~~~~~~ 90 (154)
T d2ihoa1 11 NAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTA 90 (154)
T ss_dssp ESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEEEEECCCT
T ss_pred ECCCCCEEEeCCCCCCCCCEEEEEecCCCCCCcceEEEEEecCCcCceEEEEEcCCCeEEeccCCcCCCCcEEEEEeecc
Confidence 4556777765443 3467765 33333457888888777 478999987 68888876421 12345432 2
Q ss_pred cCCCCCceEEEEEcCCCCcceEEecc-CCceEEEee
Q 013777 68 NTAGYSETFQIVRKDGDSSRVRLSAS-NGMFIQAIS 102 (436)
Q Consensus 68 ~~~~~~e~f~~~~~~~~~~~v~i~~~-nG~~lq~~~ 102 (436)
.+.+++..|.|++.+++. ..+|+.. +|..|.+.+
T Consensus 91 ~~~~~~Q~W~~~~~~~g~-~y~i~n~~sg~~Ldv~~ 125 (154)
T d2ihoa1 91 FTTNPHQLWTIKKSSDGT-SYKIQNYGSKTFVDLVN 125 (154)
T ss_dssp TCCCGGGCEEEEECTTSS-SEEEEETTTCCEEEEGG
T ss_pred cCCCcccEEEEccCCCcc-eEEEEEcCCCcEEEcCC
Confidence 345788999999987653 4566654 588887754
|
| >d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
Probab=86.79 E-value=0.37 Score=45.29 Aligned_cols=58 Identities=14% Similarity=0.173 Sum_probs=37.2
Q ss_pred HHHHHHHh-CCCCEEEe-cCccccccCCCCCCCC---cc--chHHHHHHHHHHHHHcC----CEEEEEc
Q 013777 161 EDFKFLSS-NGINAVRI-PVGWWIANDPTPPKPF---VG--GSSKVLDNAFDWAEKYG----VKVIVDL 218 (436)
Q Consensus 161 ~d~~~ia~-~G~N~VRi-pv~~~~~~~~~~~~~~---~~--~~l~~ld~~v~~a~~~G----i~VilDl 218 (436)
+-++.|++ +|+|+|-| ||.--....+..+..| ++ +..+.++++|+.|.++| |+||||+
T Consensus 73 ~kLdYl~~~LGv~~I~L~Pi~~~~~~~GY~~~d~~~id~~~Gt~~d~~~lv~~~H~~g~~~~I~VilD~ 141 (432)
T d1ji1a3 73 QKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDG 141 (432)
T ss_dssp HTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEE
T ss_pred HHhhHHHhhcCCCEEEeCCCCcCCCCCCcccccccccCcccCCHHHHHHHHHHHHHhhhhcceeEeccc
Confidence 44789985 99999998 4410000000000000 11 46889999999999886 7899997
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=86.54 E-value=0.49 Score=47.63 Aligned_cols=57 Identities=14% Similarity=0.286 Sum_probs=40.2
Q ss_pred HHHHHHHHhCCCCEEEecCccccccCCCCCCCC--------cc--chHHHHHHHHHHHHHcCCEEEEEc
Q 013777 160 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 218 (436)
Q Consensus 160 e~d~~~ia~~G~N~VRipv~~~~~~~~~~~~~~--------~~--~~l~~ld~~v~~a~~~Gi~VilDl 218 (436)
.+.+..|+++|+++|=|+=-+.. . +....-| ++ |..+.++++|+.|+++||+||||+
T Consensus 20 ~~~LpYL~~LGVs~IyLsPi~~a-~-~gS~HGYDv~D~~~Vdp~lGt~edf~~LV~aaH~~Gm~VIlDi 86 (653)
T d1iv8a2 20 IDNLWYFKDLGVSHLYLSPVLMA-S-PGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDI 86 (653)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEE-C-TTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHCCCCEEEECccCCC-C-CCCCCCccccCccccchhcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 46688999999999998422211 0 1000001 11 578999999999999999999996
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=83.70 E-value=16 Score=33.44 Aligned_cols=174 Identities=13% Similarity=0.112 Sum_probs=91.1
Q ss_pred HHHHHHHHHHcCCEEEEEcCCC-CCCCC--CCCCCCCC-CCC---CCC--ChhHHHHHHHHHHHHHH---HhCCCC---c
Q 013777 200 LDNAFDWAEKYGVKVIVDLHAA-PGSQN--GNEHSATR-DGF---QEW--GDSNVADTVAVIDFLAA---RYANRP---S 264 (436)
Q Consensus 200 ld~~v~~a~~~Gi~VilDlH~~-pg~qn--g~~~sg~~-~~~---~~w--~~~~~~~~~~~~~~lA~---ry~~~~---~ 264 (436)
.+.+++++ +.|--|.|..|.. |.... ++...|.. +.. ..- .....+.+...++.||+ ..++.. .
T Consensus 84 ~~~~~~~~-~~GgIvt~~WH~~~P~~~~~~~~~~~~~~~d~~~~v~~~lpg~~~~~~~~~~ld~ia~~~~~L~~~~~~~v 162 (381)
T d1odza_ 84 VAQVKKAY-ARGGIITVSSHFDNPKTDTQKGVWPVGTSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEWANNLKDEQGRLI 162 (381)
T ss_dssp HHHHHHHH-HTTCEEEEECCCCCTTTGGGCSSTTTTSTTCCSCCSTTTSTTSTTHHHHHHHHHHHHHHHHTCBCTTSCBC
T ss_pred HHHHHHHH-HCCCeEEEEEeeCCCCCCCCCccccCCcccchhhhHhhcCCCCchhHHHHHHHHHHHHHHHHhhhccCCCc
Confidence 44455554 5788899999975 32211 11111110 000 000 01233455555555554 555532 1
Q ss_pred eeEEEeecCCCCC-------CCChhHHHHHHHHHHHHHHhh-CCCeEEEEeCCCCC--CChhhhhccCCCCC-cEEEEEe
Q 013777 265 LAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKY-TSTAYVIMSNRLGP--ADHKELLSFASGLS-RVVIDVH 333 (436)
Q Consensus 265 v~g~eL~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~-~p~~~Viv~~~~~~--~~~~~~~~~~~~~~-nvv~~~H 333 (436)
-+-|-++.|.... ..+++.++++++.+++++|+. +-+.+|.+=+.... .....+.....+++ =.|+.+-
T Consensus 163 PVl~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~~~~~~~~~~~~~~YPGDdyVDivG~D 242 (381)
T d1odza_ 163 PVIFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYPGDEWVDVLGFD 242 (381)
T ss_dssp CEEEECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCCCTTTCSEECCE
T ss_pred cEEEeeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCccccccccCCCCCeEEEEEee
Confidence 1338899998753 235788999999999999976 45666665432111 12233444333333 4577777
Q ss_pred ecCcCCCCCCCCChhhhHHHHHHhhhhhHHHhhhcCCCeEEeeccccc
Q 013777 334 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE 381 (436)
Q Consensus 334 ~Y~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~p~v~vGEwg~~ 381 (436)
.|.+... ... ....+.. ....+..+.+..++|+.++|+|..
T Consensus 243 ~Y~~~~~-----~~~-~~~~~~~-~l~~~~~~A~~~gKp~altE~G~~ 283 (381)
T d1odza_ 243 TYGPVAD-----NAD-WFRNVVA-NAALVARMAEARGKIPVISGIGIR 283 (381)
T ss_dssp EEECSSS-----CHH-HHHHHHH-HHHHHHHHHHHHTCEECBCEEEEC
T ss_pred ccCCCCC-----chh-HHHHHHH-HHHHHHHHHHhcCCceeeeecccc
Confidence 7854321 111 1222221 122344455556778999999963
|
| >d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Sucrose phosphorylase species: Bifidobacterium adolescentis [TaxId: 1680]
Probab=80.68 E-value=0.76 Score=41.79 Aligned_cols=54 Identities=15% Similarity=0.061 Sum_probs=32.0
Q ss_pred HHHHHHHhCCCCEEEe-cCcc-cccc-CCCCCCCC---cc--chHHHHHHHHHHHHHcCCEEEEEcC
Q 013777 161 EDFKFLSSNGINAVRI-PVGW-WIAN-DPTPPKPF---VG--GSSKVLDNAFDWAEKYGVKVIVDLH 219 (436)
Q Consensus 161 ~d~~~ia~~G~N~VRi-pv~~-~~~~-~~~~~~~~---~~--~~l~~ld~~v~~a~~~Gi~VilDlH 219 (436)
+-++.|+++|+|+|=| ||.- .... ....+..| ++ +.++.|+++ ++||+||||+-
T Consensus 24 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~d~GY~~~Dy~~vdp~~Gt~~d~k~L-----~rGi~VIlDvV 85 (434)
T d1r7aa2 24 DILRTRFDGVYDGVHILPFFTPFDGADAGFDPIDHTKVDERLGSWDDVAEL-----SKTHNIMVDAI 85 (434)
T ss_dssp HHHHHHSTTTCCEEEECCCEECSSSSSTTSSCSEEEEECTTTCCHHHHHHH-----HTTSEEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCCCcCcccccccCcccCCHHHHHHH-----HhCCeeeEEec
Confidence 5589999999999999 4420 0000 00000001 11 356666665 46999999994
|