Citrus Sinensis ID: 013944

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430---
MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRSIS
cccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccHHHHHHHHcccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHcccccccHHHcHHHHHHEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccEEEcccccccccccEEEEccccccccccHHHHcccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccHHHHccc
**D*KALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGS*****STHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRSI*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRSIS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2W4O, chain A
Confidence level:confident
Coverage over the Query: 161-191,242-356,380-412
View the alignment between query and template
View the model in PyMOL
Template: 1U46, chain A
Confidence level:confident
Coverage over the Query: 160-202,237-393
View the alignment between query and template
View the model in PyMOL
Template: 3COM, chain A
Confidence level:confident
Coverage over the Query: 156-199,241-363
View the alignment between query and template
View the model in PyMOL
Template: 2Y7J, chain A
Confidence level:confident
Coverage over the Query: 150-202,227-364
View the alignment between query and template
View the model in PyMOL
Template: 2IWI, chain A
Confidence level:confident
Coverage over the Query: 159-195,236-430
View the alignment between query and template
View the model in PyMOL
Template: 2VUW, chain A
Confidence level:confident
Coverage over the Query: 159-362
View the alignment between query and template
View the model in PyMOL