Citrus Sinensis ID: 013944

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430---
Protein Sequence
MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRSIS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHcccccccHHHcHHHHHHEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccEEEcccccccccccEEEEccccccccccHHHHccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHccHHHHHHHHHHHHHcccEEEEEcHHcccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHcccccEEEEEHHHHEEEEcccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcEEEEEcccccEEEEEEEcccccccHHHHHHcccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccHHHcccHHHccccEEEEcc
Coil and Loop (DISEMBL)
MADLKALEAYANYFYHMLKIwskplpevynpqdvadyfncrphivgLRLLEVGSCFLSAVIRIRTSRIRKFLRSDlekdfdgnisqynFGMILKETVLNLGPTfikvgqslstrpdiigSDISKALSElhdqippfprSIAMKIIeeelgspvesffSFISEEpvaaasfgqvyrgstldgSIVAVkvqrpnlrhvvvRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEaanasefqeshspfpfihvpKVFRYLSRKRVLTMEwmvgesptdlislstgssvdgssthldrqKLDAKWRLLDLVNKGVEATLVQLLETGilhadphpgnlrytssgqigflDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTemdvvrpgtnTLRVTMDLEDAlgevefkdgipdvkfsrvrsis
Flexible Loop (DISEMBL)
MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFlrsdlekdfdgnISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVavkvqrpnlrhvvvrdiyilRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASefqeshspfpfihvPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDAlgevefkdgipdvkfsrvrsis
Low Complexity Region (SEG)
MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLIslstgssvdgsstHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRSIS
Disordered region (IsUnstruct)
*****ALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLI******************KLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIP***********
Disordered Region (DISOPRED)
**D*KALEAYANYFYHM*****KPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSD**************GMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRSI*
Disordered Region (DISEMBL)
MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISL************LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRSIS
Disordered Region (DISPRO)
MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGS*****STHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRSIS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRSIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	433	2.2.26 [Sep-21-2011]
Q55680	681	Uncharacterized protein s	N/A	no	0.822	0.522	0.360	9e-65
P73121	566	Uncharacterized protein s	N/A	no	0.829	0.634	0.364	3e-60
Q8RWG1	682	Uncharacterized aarF doma	no	no	0.736	0.467	0.373	5e-58
Q9MA15	711	Uncharacterized aarF doma	no	no	0.819	0.499	0.323	6e-55
Q94BU1	692	Uncharacterized aarF doma	no	no	0.889	0.556	0.337	9e-53
Q55884	567	Uncharacterized protein s	N/A	no	0.669	0.511	0.334	5e-41
Q9K0N0	503	Probable ubiquinone biosy	yes	no	0.736	0.634	0.321	5e-39
P73627	585	Uncharacterized protein s	N/A	no	0.662	0.490	0.325	9e-39
Q9JVQ5	503	Probable ubiquinone biosy	yes	no	0.734	0.632	0.314	1e-37
Q02EV2	533	Probable ubiquinone biosy	yes	no	0.734	0.596	0.328	3e-37

>sp|Q55680|Y005_SYNY3 Uncharacterized protein sll0005 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0005 PE=3 SV=1

 Score =  248 bits (632), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 140/388 (36%), Positives = 220/388 (56%), Gaps = 32/388 (8%)

Query: 29  YNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQYN 88
           Y+P  + +++  RP  V  RL+ +    L  ++ I   ++R           D  +S+  
Sbjct: 53  YHPDLIMEFYRKRPLQVLGRLINILFPLLRFILGIWWEKLR---------GKDPTVSRAK 103

Query: 89  FGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEE 148
             + L+E + NLGPT+IKVGQ+LSTRPD++       L+ L DQ+P FP  +A + IEEE
Sbjct: 104 -AIQLRELLTNLGPTYIKVGQALSTRPDLVPPVFLDELTTLQDQLPSFPNEVAYRFIEEE 162

Query: 149 LGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILR-IG 207
           LG+P E  ++ +S EP+AAAS GQVY+G    G  VAVKVQRP+L   +  DIYI+R + 
Sbjct: 163 LGAPAEEIYAELSPEPIAAASLGQVYKGKLKTGEAVAVKVQRPDLVRRITLDIYIMRSLS 222

Query: 208 LGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYL 267
           L   + + + +SDL    DEL   +  E++Y  EA N  +F + +   P I+VP ++   
Sbjct: 223 LWARRSVKRLRSDLVAITDELASRVFEEMNYYQEAINGEKFAQLYGSLPEIYVPSIYWQY 282

Query: 268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQ 327
           + +RVLTMEW+ G   T++ ++               Q +DA      LV  GV+ +L Q
Sbjct: 283 TGRRVLTMEWVEGIKLTNIKAIQA-------------QGIDAT----HLVEVGVQCSLRQ 325

Query: 328 LLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVH 387
           LLE G  HADPHPGNL   + G++ +LDFG++  ++   ++ ++ ++VH+VN D+ SL  
Sbjct: 326 LLEHGFFHADPHPGNLLAMADGRLAYLDFGMMSTIQPYQRYGLIEAVVHLVNRDFDSLAK 385

Query: 388 SLTEMDVVRPGTNTLRVTMDLEDALGEV 415
              ++D ++P T+   +      ALG+V
Sbjct: 386 DYVKLDFLKPDTDLKPII----PALGQV 409

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|P73121|Y1919_SYNY3 Uncharacterized protein slr1919 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1919 PE=3 SV=1

 Score =  233 bits (593), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/406 (36%), Positives = 210/406 (51%), Gaps = 47/406 (11%)

Query: 23  KPLP--------EVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRS 74
           KPLP          YN Q +A+Y+  RP  V  R LEV   F              FL  
Sbjct: 5   KPLPPQSELDNIRRYNAQAIANYYRRRPWKVLWRALEVVWSF------------GFFLTC 52

Query: 75  DLEKDFDGNISQYNFGMI--LKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQ 132
            L   + G +  Y       L+E +  LGPTFIKVGQ+LSTRPD++  D  + L +L DQ
Sbjct: 53  LLWDQWTGQVEYYKRQRAEDLRELLTKLGPTFIKVGQALSTRPDLVRRDFLEELIKLQDQ 112

Query: 133 IPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPN 192
           +PPF   +A +++EE+LG  V+  +  IS  PVAAAS GQVYR     G  VAVKVQRPN
Sbjct: 113 LPPFDNDLAFQLMEEQLGMKVDEAYREISAHPVAAASLGQVYRAMLFSGEEVAVKVQRPN 172

Query: 193 LRHVVVRDIYILRIGLGLLQKIAK-----RKSDLRLYADELGKGLVGELDYTLEAANASE 247
           LR  +  D+Y++R+G    QK  +        DL L  DE G  L  E+DY  E  NA +
Sbjct: 173 LRPRLSLDLYLMRLG---AQKFGRFLPLNLGHDLTLIVDEFGIKLFEEIDYLNEGRNAEK 229

Query: 248 FQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKL 307
           F E+      + VP ++   S ++VLT+EW+ G   TD   +   + +D S         
Sbjct: 230 FAENFHGDAEVKVPCIYWQYSNQKVLTLEWIQGFKLTDTDKIR-AAGLDPS--------- 279

Query: 308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ 367
                  D++  GV + L QLLE G  HADPHPGNL  T  G++ ++DFG++ ++E   +
Sbjct: 280 -------DIIRIGVTSGLRQLLEHGFFHADPHPGNLFATLDGRMAYIDFGMMDQLEPGTK 332

Query: 368 FAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALG 413
             + +SIV ++N D+ +L      +  + P T+   +   LE+  G
Sbjct: 333 ETIASSIVQLINKDYLALTEDFIALGFLAPNTDITPIIPALENVFG 378

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q8RWG1|Y4139_ARATH Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1

 Score =  225 bits (574), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 185/340 (54%), Gaps = 21/340 (6%)

Query: 93  LKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSP 152
           L+  + NLGP+FIK GQ L+ RPDII  D    L  L D +PPFP  +A  IIEEELG P
Sbjct: 170 LRNLLCNLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNEVAFNIIEEELGQP 229

Query: 153 VESFFSFISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLL 211
           +E+ FS IS + +AAAS GQVYR +    G  VA+KVQRP +  ++ RD+++ R     L
Sbjct: 230 LENIFSKISSQTIAAASLGQVYRATLRATGEDVAIKVQRPQIEPIIYRDLFLFRTLASFL 289

Query: 212 QKIAKRK--SDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR 269
              + +K   +  L  DE G+ L+ ELDYTLEA N  +F E+    P + +P V++ L  
Sbjct: 290 NGFSLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPGVYKNLCG 349

Query: 270 KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLL 329
            RVL MEW+ G   TD  ++                  DA   L   +  GV A L QLL
Sbjct: 350 PRVLVMEWIDGIRCTDPQAIK-----------------DAGIDLNGFLTVGVSAALRQLL 392

Query: 330 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL 389
           E G+ H DPHPGN+     G+I ++DFG +  + ++++  ++ ++VH VN D+  + +  
Sbjct: 393 EFGLFHGDPHPGNIFAMQDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEMANDF 452

Query: 390 TEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRV 429
           T +  +   T+   +   LE A+ +     G+ D  F  V
Sbjct: 453 TRLGFLAKDTDVSPIVPALE-AIWQNSAGKGLADFNFRSV 491

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q9MA15|Y1796_ARATH Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=1 SV=1

 Score =  215 bits (547), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 125/386 (32%), Positives = 203/386 (52%), Gaps = 31/386 (8%)

Query: 28  VYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQY 87
           +Y+P+ +A     +P     R LE+        +++   + +  L  +++K         
Sbjct: 95  IYSPELIARKHGSQPFKALRRSLEILGALGGFALKLGIDQKQGNLEKNMKKR-------- 146

Query: 88  NFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEE 147
              + L+     LGPTF+K+GQ LSTRPD+   D  + L+EL D +P FP + A   IE 
Sbjct: 147 --AIELRRIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIER 204

Query: 148 ELGSPVESFFSFISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRI 206
           EL   +E+ FS +S EP+AAAS GQVY+      G +VAVKVQRP +   +  D Y++R 
Sbjct: 205 ELDLSLETIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIR- 263

Query: 207 GLGLL--QKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVF 264
           G+G L  + +    +D+    DE    +  EL+Y  EA NA  F++ ++    + VP +F
Sbjct: 264 GVGKLINKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIF 323

Query: 265 RYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEAT 324
              + ++VLTMEW+ G    + +++ +                    ++LDLVN G++ +
Sbjct: 324 WDYTSRKVLTMEWVEGTKLNEQLAIESQG-----------------LKVLDLVNTGIQCS 366

Query: 325 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQS 384
           L QLLE G  HADPHPGNL  T  G++ FLDFG++     + +FA++  +VH+VN D+++
Sbjct: 367 LRQLLEYGFFHADPHPGNLLATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYEA 426

Query: 385 LVHSLTEMDVVRPGTNTLRVTMDLED 410
           +      +  + P  +   +   L D
Sbjct: 427 MARDYYALKFLSPDVDVTPIIPALRD 452

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q94BU1|Y1181_ARATH Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana GN=At1g71810 PE=1 SV=1

 Score =  207 bits (528), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 146/433 (33%), Positives = 219/433 (50%), Gaps = 48/433 (11%)

Query: 3   DLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIR 62
           D+ +  + + Y + +    +  L E YN   +   +  +P I+  RL ++G+ F S    
Sbjct: 44  DVDSFTSKSGYLFSLSADEADSLSE-YNFPRIDGMYKKKPLILLRRLAQIGTTF-SYWFG 101

Query: 63  IRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDI 122
           +R +      RSD  + F    ++      L++ ++ LGP ++K+ Q++S+RPD+I    
Sbjct: 102 LRLAD-EALERSD--QMFKVRAAE------LRKLLVELGPAYVKIAQAVSSRPDLIPPIY 152

Query: 123 SKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGST-LDG 181
              LS L DQI PF   +A  +IE+ELG P++  FS IS EPVAAAS GQVY+      G
Sbjct: 153 LDELSLLQDQITPFSTEVAFNMIEDELGLPIDELFSEISPEPVAAASLGQVYQARLRRSG 212

Query: 182 SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE 241
            +VAVKVQRP +R  +  D  ILR   GL++K  +  SDL    DE    L  E+DY  E
Sbjct: 213 KVVAVKVQRPGVRAAIALDTLILRYIAGLIKKAGRFNSDLEAVVDEWATSLFKEMDYLNE 272

Query: 242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTH 301
           A N  +F++ +     + VPK++   S  +VL MEW+ G                     
Sbjct: 273 AQNGIKFRKLYGGIKDVLVPKMYTEYSTSKVLVMEWVEG--------------------- 311

Query: 302 LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR 361
              QKL+ +   L LV  GV  +  QLLE G  HADPHPGN   T  GQ+ +LDFG++  
Sbjct: 312 ---QKLN-EVNDLYLVEVGVYCSFNQLLEYGFYHADPHPGNFLRTYDGQLAYLDFGMMGD 367

Query: 362 MERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGI 421
              + +   + + +H+VN D+++L      + ++ P      VT  L D      F+D I
Sbjct: 368 FRPELRDGFMEACLHLVNRDFKALAKDFVTLGLLPPTAEKSAVTKALTDV-----FQDAI 422

Query: 422 PDVKFSR-VRSIS 433
                SR VR+IS
Sbjct: 423 -----SRGVRNIS 430

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0095 PE=3 SV=1

 Score =  169 bits (427), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 166/323 (51%), Gaps = 33/323 (10%)

Query: 86  QYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKII 145
           +Y     L + +L LGPTFIK+GQSLSTR DII ++  +A ++L D++PPF    A+ +I
Sbjct: 54  RYRRAQWLVQQLLYLGPTFIKIGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQAIAVI 113

Query: 146 EEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILR 205
           E+EL   ++  F      P+A+AS GQV+R     G  V VKVQRP L  ++  D  +L 
Sbjct: 114 EQELHGAIDEIFQQFEVTPLASASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLDFELLH 173

Query: 206 IGLGLLQKIAKR----------KSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPF 255
             L    ++AKR          K ++     E    L  E+DY  E  NA  F+++ + +
Sbjct: 174 QTL----RLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFADY 229

Query: 256 PFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD 315
           P + VP+++   + + VLT+E++             G  VD      DRQ L+     LD
Sbjct: 230 PRVRVPEIYWQYTTRMVLTLEYL------------PGIKVD------DRQALETAGINLD 271

Query: 316 LV-NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASI 374
           LV   G+ A L QLL  G   +DPHPGN+   S G + F DFG +  ++   +  M+ + 
Sbjct: 272 LVIQTGICAYLKQLLVDGFFQSDPHPGNMAVDSQGDLIFYDFGTMAEVKIIAKDQMVQTF 331

Query: 375 VHIVNGDWQSLVHSLTEMDVVRP 397
             ++  D   ++ +L  M +V P
Sbjct: 332 FAVLRKDTNQVLEALIYMGLVEP 354

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q9K0N0|UBIB_NEIMB Probable ubiquinone biosynthesis protein UbiB OS=Neisseria meningitidis serogroup B (strain MC58) GN=ubiB PE=3 SV=1

 Score =  162 bits (410), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 164/339 (48%), Gaps = 20/339 (5%)

Query: 93  LKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSP 152
           L+  + +LGP FIK GQ LSTRPD+I  D +  L++L D++PPF   ++ + IE+ LG  
Sbjct: 54  LRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQS 113

Query: 153 VESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQ 212
           +E  ++    EP+A+AS  QV++     G  VAVKV RPNL  V+ +D+ ++R G G ++
Sbjct: 114 IEKLYAEFETEPIASASIAQVHKARLHSGEQVAVKVLRPNLLPVIEQDLSLMRFGAGWVE 173

Query: 213 KIAKRKSDL--RLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRK 270
           ++      L  R    E  K L  ELD   EAANAS+   +      + VPKVF      
Sbjct: 174 RLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYDYCTS 233

Query: 271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE 330
            VLT+EWM G   +D+  L      DG   H              L + GVE    Q+  
Sbjct: 234 DVLTIEWMDGTPVSDIAKLKA----DGIDLH-------------KLADYGVEIFFTQVFR 276

Query: 331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLT 390
            G  HAD HPGN+   +  +   LDFG++  +    +  +  + +   N D++ +  +  
Sbjct: 277 DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAHI 336

Query: 391 EMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRV 429
           E   V   T    +   +  A+ E  F   I  + F  V
Sbjct: 337 ESGWVPADTRAEELEAAVR-AVCEPVFNKPISQISFGLV 374

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Neisseria meningitidis serogroup B (strain MC58) (taxid: 122586)

>sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1

 Score =  161 bits (407), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 162/307 (52%), Gaps = 20/307 (6%)

Query: 93  LKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSP 152
           ++E +L+LGPTFIKVGQ  STR D+  ++  + LS+L D++P F    A  IIEEELG P
Sbjct: 88  IRENLLSLGPTFIKVGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEELGKP 147

Query: 153 VESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQ 212
           +   +      P+AAAS GQV++     G  V VKVQRP L+ +   D+ IL+      Q
Sbjct: 148 IAKLYRSFDPVPLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKKIAQYFQ 207

Query: 213 KIAK--RKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRK 270
              K  R  D     +E  K L  E DY  E  +A  F+ +     ++ VP+V+   +  
Sbjct: 208 NHPKWGRGRDWNGIYEECCKILWQETDYLREGRSADTFRRNFRGEDWVKVPRVYWRYTST 267

Query: 271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE 330
           ++LT+E++ G      I +S   +++ +   L+R+         +L   G  A L QLL 
Sbjct: 268 QILTLEYLPG------IKISHYDALEAAG--LERK---------ELAQLGARAYLFQLLN 310

Query: 331 TGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL 389
            G  HADPHPGNL  +  +G++ F DFG++  +    +  ++ ++  +   + + +V+SL
Sbjct: 311 HGFFHADPHPGNLAVSPEAGELIFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSL 370

Query: 390 TEMDVVR 396
             +  ++
Sbjct: 371 VALGALK 377

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q9JVQ5|UBIB_NEIMA Probable ubiquinone biosynthesis protein UbiB OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=ubiB PE=3 SV=1

 Score =  157 bits (398), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 164/340 (48%), Gaps = 22/340 (6%)

Query: 93  LKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSP 152
           L+  + +LGP FIK GQ LSTRPD+I  D +  L++L D++PPF   ++ + IE+ LG  
Sbjct: 54  LRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQS 113

Query: 153 VESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQ 212
           +E  ++    EP+A+AS  QV++     G  VAVKV RPNL  ++ +D+ ++R G   ++
Sbjct: 114 IEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQDLSLMRFGAAWVE 173

Query: 213 KI---AKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR 269
           ++    +R   L + A E  K L  ELD   EAANA +   +      + VPKVF     
Sbjct: 174 RLFSDGRRLKPLEVVA-EFDKYLHDELDLMREAANAGQLGRNFHNSNMLIVPKVFYDYCT 232

Query: 270 KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLL 329
             VLT+EWM G    D+  L      DG   H              L + GVE    Q+ 
Sbjct: 233 SDVLTIEWMDGTPVADIAKLKA----DGIDLH-------------KLADYGVEIFFTQVF 275

Query: 330 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL 389
             G  HAD HPGN+   +  +   LDFG++  +    +  +  + +   N D++ +  + 
Sbjct: 276 RDGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAH 335

Query: 390 TEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRV 429
            E   V   T    +   +  A+ E  F   I  + F  V
Sbjct: 336 IESGWVPADTRAEELEAAVR-AVCEPVFNKPISQISFGLV 374

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) (taxid: 122587)

>sp|Q02EV2|UBIB_PSEAB Probable ubiquinone biosynthesis protein UbiB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ubiB PE=3 SV=1

 Score =  156 bits (395), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 32/350 (9%)

Query: 90  GMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEEL 149
           G  L+  + +LGP FIK GQ LSTR D++  DI+  L+ L D++PPFP  +A+K IEE+L
Sbjct: 57  GARLRLALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQL 116

Query: 150 GSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLG 209
           G+ +E  F+    EP+A+AS  QV+      G  V VKV RPNL  V+  DI  L I   
Sbjct: 117 GAKIEQVFARFEREPLASASVAQVHAARLKSGEEVVVKVIRPNLEPVIRSDIAWLFILAR 176

Query: 210 LLQKI---AKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY 266
           L +++   A+R   + + +D   K +V ELD   EAANAS+ + +    P ++VP+V+  
Sbjct: 177 LAERVSSEARRLHPVEVVSD-YEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQVYWD 235

Query: 267 LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLV 326
             R +VL ME + G   TDL +L               Q+ D K     L  +GVE    
Sbjct: 236 WCRPKVLVMERIYGIPVTDLETLRD-------------QRTDFK----ALAERGVEIFFT 278

Query: 327 QLLETGILHADPHPGNL----RYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDW 382
           Q+      HAD HPGN+    R   S Q   +D G++  +  + Q  +  +++     D+
Sbjct: 279 QVFRDSFFHADMHPGNIFVSTRAPWSPQYIAVDCGIVGSLTDEDQDYLARNLIAFFKRDY 338

Query: 383 QSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVE---FKDGIPDVKFSRV 429
           + +     +   V   T       D E A+  V    F+  + D+ F +V
Sbjct: 339 RKVAQLHIDSGWVPAETK----VNDFEAAIRTVCEPIFEKPLKDISFGQV 384

Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis.

Pseudomonas aeruginosa (strain UCBPP-PA14) (taxid: 208963)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	433
255585088	791	Ubiquinone biosynthesis protein coq-8, p	0.995	0.544	0.798	0.0
225449082	824	PREDICTED: uncharacterized protein sll00	0.990	0.520	0.806	0.0
449449282	831	PREDICTED: uncharacterized protein sll00	0.979	0.510	0.785	0.0
357443325	824	aarF domain-containing protein kinase, p	0.981	0.515	0.785	0.0
449487184	831	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.979	0.510	0.785	0.0
356576215	823	PREDICTED: uncharacterized protein sll00	0.990	0.521	0.764	0.0
147800946	825	hypothetical protein VITISV_032583 [Viti	0.990	0.52	0.783	0.0
356535650	825	PREDICTED: uncharacterized protein sll00	0.990	0.52	0.757	0.0
297823809	786	hypothetical protein ARALYDRAFT_903159 [	0.974	0.536	0.719	0.0
18404975	814	aarF domain-containing kinase [Arabidops	0.974	0.518	0.703	1e-176

>gi|255585088|ref|XP_002533250.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] gi|223526930|gb|EEF29135.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/431 (79%), Positives = 399/431 (92%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           MADLKALEAYA+YFY++ K+WSKPLPEVY+PQDVADYF+CRPH+V LRLLEV S F SA 
Sbjct: 73  MADLKALEAYASYFYYLSKLWSKPLPEVYDPQDVADYFSCRPHVVALRLLEVFSAFASAT 132

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
           IRIR S +RKFL+ + ++D +GNISQYNFG++LKET+LNLGPTFIKVGQSLSTRPDIIG+
Sbjct: 133 IRIRASGMRKFLQPNSDRDVNGNISQYNFGVVLKETMLNLGPTFIKVGQSLSTRPDIIGT 192

Query: 121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
           +ISKALSELHDQIPPFPR++AMKI+EEELGSPVESFFS ISEEPVAAASFGQVYR +TLD
Sbjct: 193 EISKALSELHDQIPPFPRTMAMKIVEEELGSPVESFFSCISEEPVAAASFGQVYRANTLD 252

Query: 181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
           G  VA+KVQRPNLRHVVVRDIYILR+GLGL+QKIAKRK+DLRLYADELGKGLVGELDY+L
Sbjct: 253 GCNVALKVQRPNLRHVVVRDIYILRLGLGLVQKIAKRKNDLRLYADELGKGLVGELDYSL 312

Query: 241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST 300
           EAANAS+FQ+ HS F F+HVPK++ +L+RKRVLTMEW+VGESPTDL+S+S G++VD    
Sbjct: 313 EAANASKFQDIHSSFKFMHVPKIYHHLTRKRVLTMEWVVGESPTDLLSISAGNAVDHGYA 372

Query: 301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
           + +RQK +AK RLLDLV+KGVEA+LVQLLETG+LHADPHPGNLRYTSSGQ+GFLDFGLLC
Sbjct: 373 YSERQKTEAKRRLLDLVSKGVEASLVQLLETGLLHADPHPGNLRYTSSGQLGFLDFGLLC 432

Query: 361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
           +ME+KHQFAMLASIVHIVNGDW+SLV +L EMD+VRPGTN  RVTM+LE++LGEVEF+DG
Sbjct: 433 QMEKKHQFAMLASIVHIVNGDWESLVRALIEMDIVRPGTNLRRVTMELENSLGEVEFRDG 492

Query: 421 IPDVKFSRVRS 431
           IPDVKFSRV S
Sbjct: 493 IPDVKFSRVLS 503

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449082|ref|XP_002274556.1| PREDICTED: uncharacterized protein sll0005 [Vitis vinifera] gi|296086035|emb|CBI31476.3| unnamed protein product [Vitis vinifera]

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/429 (80%), Positives = 382/429 (89%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           MADLKALE YA+YFYH+ K+WSKPLPEVY+P +VADYFN RPHIV LRLLEV S F  A 
Sbjct: 107 MADLKALETYASYFYHLSKLWSKPLPEVYDPLEVADYFNRRPHIVALRLLEVFSSFAFAA 166

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
           IRIRTS I  F  S++++D +GNIS YNFGM+LKET+LNLGPTFIKVGQS+STRPDIIG 
Sbjct: 167 IRIRTSGITMFYGSNMDRDINGNISPYNFGMVLKETMLNLGPTFIKVGQSISTRPDIIGP 226

Query: 121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
           +ISKALS LHDQIPPFPR +AMKIIEEELGSPVE+FF +ISEEPVAAASFGQVY G TLD
Sbjct: 227 EISKALSGLHDQIPPFPRDVAMKIIEEELGSPVEAFFRYISEEPVAAASFGQVYWGITLD 286

Query: 181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
           GS VAVKVQRPNL HVVVRDIYILRIGLGL+QKIAKRKSD RLYADELGKGL GELDYTL
Sbjct: 287 GSNVAVKVQRPNLHHVVVRDIYILRIGLGLVQKIAKRKSDPRLYADELGKGLSGELDYTL 346

Query: 241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST 300
           EAANASEF E+HS F FI VPKV R+LSRKRVLTMEWMVGE+P+DLIS S G+S+   S 
Sbjct: 347 EAANASEFLETHSSFSFIRVPKVLRHLSRKRVLTMEWMVGENPSDLISASAGNSIAHVSG 406

Query: 301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
           + +RQ+ DAK +LLDLVNKGVEA+LVQLL+TG+LHADPHPGNLRY  SGQIGFLDFGLLC
Sbjct: 407 YSERQQTDAKRQLLDLVNKGVEASLVQLLDTGLLHADPHPGNLRYMPSGQIGFLDFGLLC 466

Query: 361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
           RME+KHQFAMLASIVHIVNGDW SLVH+LTEMD++R GTN  RVTMDLEDALGEVEFKDG
Sbjct: 467 RMEKKHQFAMLASIVHIVNGDWPSLVHALTEMDIIRAGTNIQRVTMDLEDALGEVEFKDG 526

Query: 421 IPDVKFSRV 429
           IPDVKFS+V
Sbjct: 527 IPDVKFSKV 535

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449282|ref|XP_004142394.1| PREDICTED: uncharacterized protein sll0005-like [Cucumis sativus]

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/429 (78%), Positives = 382/429 (89%), Gaps = 5/429 (1%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           MADLKALEAYA Y+Y + KIW+KPLPEVY+P+ VA+YF CRPHIVGLRLLEV S F SA 
Sbjct: 116 MADLKALEAYAVYYYSLSKIWTKPLPEVYDPESVAEYFGCRPHIVGLRLLEVFSSFASAA 175

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
           IRIR SR++KF  + L +D D   S+ NFG++LKET+LNLGPTFIKVGQSLSTRPDIIGS
Sbjct: 176 IRIRMSRVQKFPGTSLHEDSDE--SKSNFGLVLKETLLNLGPTFIKVGQSLSTRPDIIGS 233

Query: 121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
           +ISKALSELHDQIPPFPR+IAMKII+EELGSPVESFFS+ISE+PVAAASFGQVYRG TLD
Sbjct: 234 EISKALSELHDQIPPFPRTIAMKIIQEELGSPVESFFSYISEDPVAAASFGQVYRGRTLD 293

Query: 181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
           G  VAVKVQRPN+ HVVVRD+YILR+GLG LQKIAKRK+DLRLYADELGKGL+GELDY L
Sbjct: 294 GISVAVKVQRPNMLHVVVRDVYILRLGLGFLQKIAKRKNDLRLYADELGKGLLGELDYNL 353

Query: 241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST 300
           EA NA+EF E+HS FPFIHVPKVFR+LSRKRVLTMEW+ G+SPT+L+++S+G     SST
Sbjct: 354 EARNATEFMETHSRFPFIHVPKVFRHLSRKRVLTMEWISGDSPTELLTISSGKP---SST 410

Query: 301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
           + +RQK+DA+ RLLDLVNKGVEATLVQLL+TG+LHADPHPGNLRY  SGQIGFLDFGLLC
Sbjct: 411 YSERQKVDARRRLLDLVNKGVEATLVQLLDTGLLHADPHPGNLRYIPSGQIGFLDFGLLC 470

Query: 361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
           RME KHQ AMLASIVH+VNG+W SLV +L EMDVVRPGTN  RVT+DLE ALGEVEFK G
Sbjct: 471 RMEEKHQVAMLASIVHLVNGEWASLVEALAEMDVVRPGTNMRRVTLDLEYALGEVEFKAG 530

Query: 421 IPDVKFSRV 429
           IPDVKFS+V
Sbjct: 531 IPDVKFSKV 539

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443325|ref|XP_003591940.1| aarF domain-containing protein kinase, putative [Medicago truncatula] gi|355480988|gb|AES62191.1| aarF domain-containing protein kinase, putative [Medicago truncatula]

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/429 (78%), Positives = 380/429 (88%), Gaps = 4/429 (0%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           M DLKALEAYA+YFYH+ KIWSKPLPE Y+PQDVA YF+ RPH+V LR+LEV S F SA 
Sbjct: 111 MYDLKALEAYASYFYHLSKIWSKPLPETYDPQDVAHYFSARPHVVALRMLEVFSSFASAG 170

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
           + IRTS +RKFL  + E   D   S+YNFG++LKET+LNLGPTFIKVGQSLSTRPDIIG 
Sbjct: 171 VSIRTSGLRKFLPINAEGGMDDKTSEYNFGLVLKETMLNLGPTFIKVGQSLSTRPDIIGV 230

Query: 121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
           ++SKALSELHDQIPPFPR++AMKI+EEELG+P+ESFFS+ISEEPVAAASFGQVY   T D
Sbjct: 231 EMSKALSELHDQIPPFPRTVAMKILEEELGAPLESFFSYISEEPVAAASFGQVYFARTTD 290

Query: 181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
           G  VAVKVQRPNLRHVVVRDIYILR+GLGLLQKIAKRKSDLRLYADELG+G VGELDYTL
Sbjct: 291 GVNVAVKVQRPNLRHVVVRDIYILRLGLGLLQKIAKRKSDLRLYADELGRGFVGELDYTL 350

Query: 241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST 300
           EAANA +F+E HS F F+ VPK+F +LSRKRVLTMEWMVGESPTDLIS+STG+S + S  
Sbjct: 351 EAANALKFREVHSSFSFMRVPKIFLHLSRKRVLTMEWMVGESPTDLISVSTGNSTEYS-- 408

Query: 301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
             DRQK+DAK RLLDLVNKGVEATLVQLLETG++HADPHPGNLR TSSG+IGFLDFGLLC
Sbjct: 409 --DRQKVDAKRRLLDLVNKGVEATLVQLLETGLIHADPHPGNLRCTSSGEIGFLDFGLLC 466

Query: 361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
           +ME++HQFAMLASIVHIVNGDW SLV++L +MD+VRPGTN   VTM+LE ALGEVEFKDG
Sbjct: 467 QMEKRHQFAMLASIVHIVNGDWASLVNALIDMDMVRPGTNIRLVTMELEQALGEVEFKDG 526

Query: 421 IPDVKFSRV 429
           IPDVKFSRV
Sbjct: 527 IPDVKFSRV 535

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487184|ref|XP_004157521.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein sll0005-like [Cucumis sativus]

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/429 (78%), Positives = 381/429 (88%), Gaps = 5/429 (1%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           MADLKALEAYA Y+Y + KIW+KPLPEVY+P+ VA+YF CRPHIVGLRLLEV S F SA 
Sbjct: 116 MADLKALEAYAVYYYSLSKIWTKPLPEVYDPESVAEYFGCRPHIVGLRLLEVFSSFASAA 175

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
           IRIR SR++KF  + L +D D   S+ NFG++LKET+LNLGPTFIKVGQSLSTRPDIIGS
Sbjct: 176 IRIRMSRVQKFPGTSLHEDSDE--SKSNFGLVLKETLLNLGPTFIKVGQSLSTRPDIIGS 233

Query: 121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
           +ISKALSELHDQIPPFPR+IAMKII+EELGSPVESFFS+ISE+PVAAASFGQVYRG TLD
Sbjct: 234 EISKALSELHDQIPPFPRTIAMKIIQEELGSPVESFFSYISEDPVAAASFGQVYRGRTLD 293

Query: 181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
           G  VAVKVQRPN+ HVVVRD+YILR+GLG LQKIAKRK DLRLYADELGKGL+GELDY L
Sbjct: 294 GISVAVKVQRPNMLHVVVRDVYILRLGLGFLQKIAKRKXDLRLYADELGKGLLGELDYNL 353

Query: 241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST 300
           EA NA+EF E+HS FPFIHVPKVFR+LSRKRVLTMEW+ G+SPT+L+++S+G     SST
Sbjct: 354 EARNATEFMETHSRFPFIHVPKVFRHLSRKRVLTMEWISGDSPTELLTISSGKP---SST 410

Query: 301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
           + +RQK+DA+ RLLDLVNKGVEATLVQLL+TG+LHADPHPGNLRY  SGQIGFLDFGLLC
Sbjct: 411 YSERQKVDARRRLLDLVNKGVEATLVQLLDTGLLHADPHPGNLRYIPSGQIGFLDFGLLC 470

Query: 361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
           RME KHQ AMLASIVH+VNG+W SLV +L EMDVVRPGTN  RVT+DLE ALGEVEFK G
Sbjct: 471 RMEEKHQVAMLASIVHLVNGEWASLVEALAEMDVVRPGTNMRRVTLDLEYALGEVEFKAG 530

Query: 421 IPDVKFSRV 429
           IPDVKFS+V
Sbjct: 531 IPDVKFSKV 539

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576215|ref|XP_003556229.1| PREDICTED: uncharacterized protein sll0005-like [Glycine max]

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/429 (76%), Positives = 379/429 (88%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           M DL+ALEAYA+YFY++ K+WS+PLP+ Y+PQ+V+ YF+ RPH+V LR+LEV   F +A+
Sbjct: 108 MYDLEALEAYASYFYYLSKLWSRPLPQAYDPQEVSQYFSVRPHVVTLRVLEVLFSFATAM 167

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
           I IRTS  RKFLR   E+D D   SQYNFGM+LKET+LNLGPTFIKVGQSLSTRPDIIG 
Sbjct: 168 ISIRTSGFRKFLRLIPEEDVDDASSQYNFGMVLKETLLNLGPTFIKVGQSLSTRPDIIGV 227

Query: 121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
           ++SKALSELHDQIPPFPR++AMKI+EEE G P+ESFFS+ISEEP+AAASFGQVY   T D
Sbjct: 228 EMSKALSELHDQIPPFPRTVAMKIMEEEFGCPLESFFSYISEEPMAAASFGQVYFARTTD 287

Query: 181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
           G+ VAVKVQRPNL HVVVRDIYILR+GLGLLQKIAKRKSD RLYADELGKG VGELDYTL
Sbjct: 288 GNNVAVKVQRPNLHHVVVRDIYILRLGLGLLQKIAKRKSDPRLYADELGKGFVGELDYTL 347

Query: 241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST 300
           EAANAS+F E HS F F++VPKVF +L+RKRVLTMEWMVGESPTDL+S++ G+SV   S 
Sbjct: 348 EAANASKFLEVHSSFTFMNVPKVFPHLTRKRVLTMEWMVGESPTDLLSVTAGNSVGNVSG 407

Query: 301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
           + +RQKLDAK RLLDLV+KGVE+TLVQLLETG+LHADPHPGNLRYTSSGQIGFLDFGLLC
Sbjct: 408 YSERQKLDAKRRLLDLVSKGVESTLVQLLETGLLHADPHPGNLRYTSSGQIGFLDFGLLC 467

Query: 361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
           +ME++HQFAMLASI+HIVNGDW SLV +L +MDVVRPGTN   VT++LE ALGEVEFK+G
Sbjct: 468 QMEKRHQFAMLASIIHIVNGDWASLVRALVDMDVVRPGTNIRLVTLELEQALGEVEFKEG 527

Query: 421 IPDVKFSRV 429
           IPDVKFSRV
Sbjct: 528 IPDVKFSRV 536

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800946|emb|CAN75565.1| hypothetical protein VITISV_032583 [Vitis vinifera]

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/430 (78%), Positives = 370/430 (86%), Gaps = 1/430 (0%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           MADLKALE YA+YFYH+ K+WSKPLPEVY+P +VADYFN RPHIV LRLLEV S F  A 
Sbjct: 107 MADLKALETYASYFYHLSKLWSKPLPEVYDPLEVADYFNRRPHIVALRLLEVFSSFAFAA 166

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFI-KVGQSLSTRPDIIG 119
           IRIRTS I  F  S++++D +GNIS YNFGM       +  P     VGQS+STRPDIIG
Sbjct: 167 IRIRTSGITMFYGSNMDRDINGNISPYNFGMSQDYKYASYMPLLADAVGQSISTRPDIIG 226

Query: 120 SDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTL 179
            +ISKALS LHDQIPPFPR +AMKIIEEELGSPVE+FF +ISEEPVAAASFGQVYRG TL
Sbjct: 227 PEISKALSGLHDQIPPFPRDVAMKIIEEELGSPVEAFFRYISEEPVAAASFGQVYRGITL 286

Query: 180 DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT 239
           DGS VAVKVQRPNL HVVVRDIYILRIGLGL+QKIAKRKSD RLYADELGKGL GELDYT
Sbjct: 287 DGSNVAVKVQRPNLHHVVVRDIYILRIGLGLVQKIAKRKSDPRLYADELGKGLSGELDYT 346

Query: 240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSS 299
           LEAANASEF E+HS F FI VPKV R+LSRKRVLTMEWMVGE+P+DLIS S G+S+   S
Sbjct: 347 LEAANASEFLETHSSFSFIRVPKVLRHLSRKRVLTMEWMVGENPSDLISASAGNSIAHVS 406

Query: 300 THLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLL 359
            + +RQ+ DAK RLLDLVNKGVEA+LVQLL+TG+LHADPHPGNLRY  SGQIGFLDFGLL
Sbjct: 407 GYSERQQTDAKRRLLDLVNKGVEASLVQLLDTGLLHADPHPGNLRYMPSGQIGFLDFGLL 466

Query: 360 CRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKD 419
           CRME+KHQFAMLASIVHIVNGDW SLVH+LTEMDV+R GTN  RVTMDLEDALGEVEFKD
Sbjct: 467 CRMEKKHQFAMLASIVHIVNGDWPSLVHALTEMDVIRAGTNIQRVTMDLEDALGEVEFKD 526

Query: 420 GIPDVKFSRV 429
           GIPDVKFS+V
Sbjct: 527 GIPDVKFSKV 536

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535650|ref|XP_003536357.1| PREDICTED: uncharacterized protein sll0005-like [Glycine max]

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/429 (75%), Positives = 374/429 (87%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           M DLKA EAYA+YFY+  K+W++PLP+ Y+PQ VA YF+ RPH+V LR+LEV   F +A+
Sbjct: 110 MYDLKAFEAYASYFYYFSKLWTRPLPQDYDPQQVAQYFSVRPHLVTLRVLEVLFSFATAM 169

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
           I IRTS   KFLR   E+D D   SQYNFGM+LKET+LNLGPTFIKVGQSLSTRPDIIG 
Sbjct: 170 ISIRTSGFSKFLRLIPEEDVDDTSSQYNFGMVLKETLLNLGPTFIKVGQSLSTRPDIIGV 229

Query: 121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
           ++SKALSELHDQIPPFPR++AMKI+EEE G P+ESFFS+ISEEP+AAASFGQVY   T D
Sbjct: 230 EMSKALSELHDQIPPFPRTVAMKIMEEEFGCPLESFFSYISEEPIAAASFGQVYFARTTD 289

Query: 181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
           G+ VAVKVQRPNL HVVVRDIYILR+GLGLLQKIAKRKSD RLYADELGKG VGELDYTL
Sbjct: 290 GNNVAVKVQRPNLHHVVVRDIYILRLGLGLLQKIAKRKSDPRLYADELGKGFVGELDYTL 349

Query: 241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST 300
           EAANAS+F E HS F F++VPKVF +L+RKRVLTMEWMVGESPTDL+S++ G+SV   S 
Sbjct: 350 EAANASKFLEVHSSFTFMNVPKVFPHLTRKRVLTMEWMVGESPTDLLSVTAGNSVGNVSE 409

Query: 301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
           + +RQKLDAK RLLDLV+KG+E+TLVQLLETG+LHADPHPGNLRYTSSGQIGFLDFGLLC
Sbjct: 410 YSERQKLDAKRRLLDLVSKGIESTLVQLLETGLLHADPHPGNLRYTSSGQIGFLDFGLLC 469

Query: 361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
           +ME++HQ AMLASI+HIVNGDW SLV +L +MDVVRPGTN   VT++LE ALGEVEFK+G
Sbjct: 470 QMEKRHQLAMLASIIHIVNGDWASLVRALVDMDVVRPGTNIRLVTLELEQALGEVEFKEG 529

Query: 421 IPDVKFSRV 429
           IPDVKFSRV
Sbjct: 530 IPDVKFSRV 538

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823809|ref|XP_002879787.1| hypothetical protein ARALYDRAFT_903159 [Arabidopsis lyrata subsp. lyrata] gi|297325626|gb|EFH56046.1| hypothetical protein ARALYDRAFT_903159 [Arabidopsis lyrata subsp. lyrata]

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/431 (71%), Positives = 369/431 (85%), Gaps = 9/431 (2%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           MAD+KALEAYA YFY + K+WS+PLPEVY+ Q VADYFNCRPH+V  RLLEV S F+ A 
Sbjct: 81  MADVKALEAYAAYFYCLSKMWSRPLPEVYDSQAVADYFNCRPHVVAFRLLEVFSAFMVAA 140

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
           IR+RTS       SD  K  +   S+ NFGM+LKET+L+LGPTFIKVGQSLSTRPDIIG+
Sbjct: 141 IRLRTSA------SDKSKSLEA--SEQNFGMVLKETMLHLGPTFIKVGQSLSTRPDIIGT 192

Query: 121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
           +ISKALSELHD+IPPFP   A+KIIEEELG PVESFFS  S+E VAAASFGQVYRG TLD
Sbjct: 193 EISKALSELHDRIPPFPWPEAVKIIEEELGGPVESFFSQFSQETVAAASFGQVYRGRTLD 252

Query: 181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
           GS VAVKVQRP+LRH V+RDIYILR+GLG+L+K+AKR++D+R+YADELG GL GELD+TL
Sbjct: 253 GSDVAVKVQRPDLRHAVLRDIYILRLGLGVLRKVAKRENDIRVYADELGMGLAGELDFTL 312

Query: 241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST 300
           EAANA EFQE+HS F +I VPKV+++L+RKRVLTMEWMVGESPTDL+++S+G S   + +
Sbjct: 313 EAANALEFQEAHSRFSYIRVPKVYKHLTRKRVLTMEWMVGESPTDLLAISSGYSDHDNES 372

Query: 301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
           H ++QK++A+ RLLDLVNKGVEATLVQLL+TGILHADPHPGNLRYT+S QIGFLDFGL+C
Sbjct: 373 H-EKQKIEARRRLLDLVNKGVEATLVQLLDTGILHADPHPGNLRYTTSRQIGFLDFGLVC 431

Query: 361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
           RM+RKHQ AMLASIVHIVNGDW  LV SLT+MDV+ PG NT R T+DLE ALGEV+  +G
Sbjct: 432 RMQRKHQLAMLASIVHIVNGDWAFLVESLTDMDVITPGVNTRRFTLDLEYALGEVKLING 491

Query: 421 IPDVKFSRVRS 431
           IPD++F++V S
Sbjct: 492 IPDIEFTKVLS 502

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18404975|ref|NP_565900.1| aarF domain-containing kinase [Arabidopsis thaliana] gi|20197257|gb|AAC28988.2| putative ABC transporter; alternative splicing isoform gene prediction data combined with cDNA alignment data to generate this model [Arabidopsis thaliana] gi|330254550|gb|AEC09644.1| aarF domain-containing kinase [Arabidopsis thaliana]

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 303/431 (70%), Positives = 364/431 (84%), Gaps = 9/431 (2%)

Query: 1   MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
           MAD+KALE YA YFY + K+WS+PLPEVY+ Q VADYFNCRPH+V  RLLEV S F  A 
Sbjct: 118 MADVKALETYAGYFYSLSKMWSRPLPEVYDSQAVADYFNCRPHVVAFRLLEVFSAFTIAA 177

Query: 61  IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
           IR+RTS   K       K  +   S+  FGM+LKET+L+LGPTFIKVGQSLSTRPDIIG+
Sbjct: 178 IRLRTSASVK------GKSLEA--SEQIFGMVLKETMLHLGPTFIKVGQSLSTRPDIIGT 229

Query: 121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
           +ISKALSELHD+IPPFP   A+KI+E ELG PVESFFS  S+E VAAASFGQVYRG TLD
Sbjct: 230 EISKALSELHDRIPPFPWPEAVKILEGELGGPVESFFSQFSQETVAAASFGQVYRGRTLD 289

Query: 181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
           G+ VAVKVQRP+LRH V+RDIYILR+GLG+L+K+AKR++D+R+YADELG GL GELD+TL
Sbjct: 290 GADVAVKVQRPDLRHAVLRDIYILRLGLGVLRKVAKRENDIRVYADELGMGLAGELDFTL 349

Query: 241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST 300
           EAANASEFQE+H+ F +I VPKV+++L+RKRVLTMEWMVGESPTDL+++S+G S   + +
Sbjct: 350 EAANASEFQEAHARFSYIRVPKVYQHLTRKRVLTMEWMVGESPTDLLAISSGYSDHDNES 409

Query: 301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
           H ++QK++A+ RLLDLVNKGVEATLVQLL+TGILHADPHPGNLRYT+S QIGFLDFGL+C
Sbjct: 410 H-EKQKIEARRRLLDLVNKGVEATLVQLLDTGILHADPHPGNLRYTTSRQIGFLDFGLVC 468

Query: 361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
           RM+RKHQ AMLASIVHIVNGDW  LV SL +MDV+ PG NT R T+DLE ALGEV+  +G
Sbjct: 469 RMQRKHQLAMLASIVHIVNGDWACLVESLIDMDVITPGVNTRRFTLDLEYALGEVKLING 528

Query: 421 IPDVKFSRVRS 431
           IPD++F++V S
Sbjct: 529 IPDIEFTKVLS 539

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	433
TAIR|locus:2056123	814	ATATH8 "AT2G39190" [Arabidopsi	0.974	0.518	0.698	8.9e-157
TAIR|locus:2019838	711	AT1G79600 [Arabidopsis thalian	0.817	0.497	0.343	1.3e-53
TAIR|locus:2093711	793	AT3G24190 [Arabidopsis thalian	0.565	0.308	0.393	4.1e-53
TAIR|locus:2128116	682	ACDO1 "ABC1-like kinase relate	0.736	0.467	0.373	6.3e-53
TAIR|locus:2013041	692	AT1G71810 [Arabidopsis thalian	0.618	0.387	0.353	1.5e-51
TAIR|locus:2177719	761	ATH13 "AT5G64940" [Arabidopsis	0.662	0.377	0.369	2.5e-42
TIGR_CMR|SPO_0144	509	SPO_0144 "2-polyprenylphenol 6	0.729	0.620	0.328	1.3e-34
UNIPROTKB|Q3ACS7	541	CHY_1218 "ABC1 family protein"	0.648	0.519	0.323	2.3e-34
TIGR_CMR|CHY_1218	541	CHY_1218 "ABC1 family protein"	0.648	0.519	0.323	2.3e-34
TIGR_CMR|APH_0984	483	APH_0984 "2-polyprenylphenol 6	0.450	0.403	0.382	4.6e-33

TAIR|locus:2056123 ATATH8 "AT2G39190" [Arabidopsis thaliana (taxid:3702)]

 Score = 1528 (542.9 bits), Expect = 8.9e-157, P = 8.9e-157
 Identities = 301/431 (69%), Positives = 356/431 (82%)

Query:     1 MADLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAV 60
             MAD+KALE YA YFY + K+WS+PLPEVY+ Q VADYFNCRPH+V  RLLEV S F  A 
Sbjct:   118 MADVKALETYAGYFYSLSKMWSRPLPEVYDSQAVADYFNCRPHVVAFRLLEVFSAFTIAA 177

Query:    61 IRIRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS 120
             IR+RTS   K     LE       S+  FGM+LKET+L+LGPTFIKVGQSLSTRPDIIG+
Sbjct:   178 IRLRTSASVK--GKSLEA------SEQIFGMVLKETMLHLGPTFIKVGQSLSTRPDIIGT 229

Query:   121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD 180
             +ISKALSELHD+IPPFP   A+KI+E ELG PVESFFS  S+E VAAASFGQVYRG TLD
Sbjct:   230 EISKALSELHDRIPPFPWPEAVKILEGELGGPVESFFSQFSQETVAAASFGQVYRGRTLD 289

Query:   181 GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
             G+ VAVKVQRP+LRH V+RDIYILR+GLG+L+K+AKR++D+R+YADELG GL GELD+TL
Sbjct:   290 GADVAVKVQRPDLRHAVLRDIYILRLGLGVLRKVAKRENDIRVYADELGMGLAGELDFTL 349

Query:   241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLIXXXXXXXXXXXXX 300
             EAANASEFQE+H+ F +I VPKV+++L+RKRVLTMEWMVGESPTDL+             
Sbjct:   350 EAANASEFQEAHARFSYIRVPKVYQHLTRKRVLTMEWMVGESPTDLLAISSGYSDHDNES 409

Query:   301 HLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC 360
             H ++QK++A+ RLLDLVNKGVEATLVQLL+TGILHADPHPGNLRYT+S QIGFLDFGL+C
Sbjct:   410 H-EKQKIEARRRLLDLVNKGVEATLVQLLDTGILHADPHPGNLRYTTSRQIGFLDFGLVC 468

Query:   361 RMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDG 420
             RM+RKHQ AMLASIVHIVNGDW  LV SL +MDV+ PG NT R T+DLE ALGEV+  +G
Sbjct:   469 RMQRKHQLAMLASIVHIVNGDWACLVESLIDMDVITPGVNTRRFTLDLEYALGEVKLING 528

Query:   421 IPDVKFSRVRS 431
             IPD++F++V S
Sbjct:   529 IPDIEFTKVLS 539

GO:0005215 "transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019838 AT1G79600 [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
 Identities = 133/387 (34%), Positives = 205/387 (52%)

Query:    28 VYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGNISQY 87
             +Y+P+ +A     +P     R LE+        +++   +     + +LEK+      + 
Sbjct:    95 IYSPELIARKHGSQPFKALRRSLEILGALGGFALKLGIDQ----KQGNLEKNMKKRAIE- 149

Query:    88 NFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEE 147
                  L+     LGPTF+K+GQ LSTRPD+   D  + L+EL D +P FP + A   IE 
Sbjct:   150 -----LRRIFTRLGPTFVKLGQGLSTRPDLCPPDYLEELAELQDALPTFPDAEAFACIER 204

Query:   148 ELGSPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRI 206
             EL   +E+ FS +S EP+AAAS GQVY+      G +VAVKVQRP +   +  D Y++R 
Sbjct:   205 ELDLSLETIFSSVSPEPIAAASLGQVYKAQLRYSGQVVAVKVQRPGIEEAIGLDFYLIR- 263

Query:   207 GLG-LLQKIAKR-KSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVF 264
             G+G L+ K      +D+    DE    +  EL+Y  EA NA  F++ ++    + VP +F
Sbjct:   264 GVGKLINKYVDFITTDVLTLIDEFACRVYQELNYVQEAQNARRFKKLYADKADVLVPDIF 323

Query:   265 -RYLSRKRVLTMEWMVGESPTDLIXXXXXXXXXXXXXHLDRQKLDAKWRLLDLVNKGVEA 323
               Y SRK VLTMEW+ G    + +              ++ Q L    ++LDLVN G++ 
Sbjct:   324 WDYTSRK-VLTMEWVEGTKLNEQLA-------------IESQGL----KVLDLVNTGIQC 365

Query:   324 TLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQ 383
             +L QLLE G  HADPHPGNL  T  G++ FLDFG++     + +FA++  +VH+VN D++
Sbjct:   366 SLRQLLEYGFFHADPHPGNLLATPDGKLAFLDFGMMSETPEEARFAIIGHVVHLVNRDYE 425

Query:   384 SLVHSLTEMDVVRPGTNTLRVTMDLED 410
             ++      +  + P  +   +   L D
Sbjct:   426 AMARDYYALKFLSPDVDVTPIIPALRD 452

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2093711 AT3G24190 [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 4.1e-53, Sum P(2) = 4.1e-53
 Identities = 105/267 (39%), Positives = 149/267 (55%)

Query:    22 SKPLPEVYNPQDVADYFNCRPHIVGLR---LLEVGSCFLSAVIRIRTSRIRKFLRSDLEK 78
             S+ LP VY+P+ ++ Y+  RP  V  R   LL V   FLS   RI    I K ++     
Sbjct:   134 SEFLPLVYDPETISAYWGKRPRAVASRVIQLLSVAGGFLS---RIAGDVINKKVK----- 185

Query:    79 DFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPR 138
               +  +++    + L+E V +LGP +IK+GQ+LS RPDI+       L +L D++P +P 
Sbjct:   186 --ENEVAR---AIELREIVTSLGPAYIKLGQALSIRPDILSPAAMTELQKLCDKVPSYPD 240

Query:   139 SIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD-GSIVAVKVQRPNLRHVV 197
              +AM +IEEELG P    +S +S  P+AAAS GQVY+G   + G +VAVKVQRP +   V
Sbjct:   241 DVAMALIEEELGKPWYDVYSELSPSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETV 300

Query:   198 VRDIYILRIGLGL-LQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQES-HSPF 255
               D++++R  LGL L+K  +   D+    DE       ELDY  E  N + F E      
Sbjct:   301 TVDLFVIR-NLGLFLRKFPQVSVDVVGLVDEWAARFFEELDYVNEGENGTYFAEMMKKDL 359

Query:   256 PFIHVPKVF-RYLSRKRVLTMEWMVGE 281
             P + VPK + +Y SRK VLT  W+ GE
Sbjct:   360 PQVVVPKTYQKYTSRK-VLTTSWIDGE 385

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009813 "flavonoid biosynthetic process" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2128116 ACDO1 "ABC1-like kinase related to chlorophyll degradation and oxidative stress 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 127/340 (37%), Positives = 184/340 (54%)

Query:    93 LKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSP 152
             L+  + NLGP+FIK GQ L+ RPDII  D    L  L D +PPFP  +A  IIEEELG P
Sbjct:   170 LRNLLCNLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPPFPNEVAFNIIEEELGQP 229

Query:   153 VESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLL 211
             +E+ FS IS + +AAAS GQVYR +    G  VA+KVQRP +  ++ RD+++ R     L
Sbjct:   230 LENIFSKISSQTIAAASLGQVYRATLRATGEDVAIKVQRPQIEPIIYRDLFLFRTLASFL 289

Query:   212 QKIAKRK--SDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR 269
                + +K   +  L  DE G+ L+ ELDYTLEA N  +F E+    P + +P V++ L  
Sbjct:   290 NGFSLQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPGVYKNLCG 349

Query:   270 KRVLTMEWMVGESPTDLIXXXXXXXXXXXXXHLDRQKLDAKWRLLDLVNKGVEATLVQLL 329
              RVL MEW+ G   TD                  +   DA   L   +  GV A L QLL
Sbjct:   350 PRVLVMEWIDGIRCTD-----------------PQAIKDAGIDLNGFLTVGVSAALRQLL 392

Query:   330 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL 389
             E G+ H DPHPGN+     G+I ++DFG +  + ++++  ++ ++VH VN D+  + +  
Sbjct:   393 EFGLFHGDPHPGNIFAMQDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEMANDF 452

Query:   390 TEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRV 429
             T +  +   T+   +   LE A+ +     G+ D  F  V
Sbjct:   453 TRLGFLAKDTDVSPIVPALE-AIWQNSAGKGLADFNFRSV 491

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0080183 "response to photooxidative stress" evidence=IMP

TAIR|locus:2013041 AT1G71810 [Arabidopsis thaliana (taxid:3702)]

 Score = 394 (143.8 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
 Identities = 99/280 (35%), Positives = 152/280 (54%)

Query:     3 DLKALEAYANYFYHMLKIWSKPLPEVYNPQDVADYFNCRPHIVGLRLLEVGSCFLSAVIR 62
             D+ +  + + Y + +    +  L E YN   +   +  +P I+  RL ++G+ F S    
Sbjct:    44 DVDSFTSKSGYLFSLSADEADSLSE-YNFPRIDGMYKKKPLILLRRLAQIGTTF-SYWFG 101

Query:    63 IRTSRIRKFLRSDLEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDI 122
             +R +      RSD  + F    ++      L++ ++ LGP ++K+ Q++S+RPD+I    
Sbjct:   102 LRLAD-EALERSD--QMFKVRAAE------LRKLLVELGPAYVKIAQAVSSRPDLIPPIY 152

Query:   123 SKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTL-DG 181
                LS L DQI PF   +A  +IE+ELG P++  FS IS EPVAAAS GQVY+      G
Sbjct:   153 LDELSLLQDQITPFSTEVAFNMIEDELGLPIDELFSEISPEPVAAASLGQVYQARLRRSG 212

Query:   182 SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE 241
              +VAVKVQRP +R  +  D  ILR   GL++K  +  SDL    DE    L  E+DY  E
Sbjct:   213 KVVAVKVQRPGVRAAIALDTLILRYIAGLIKKAGRFNSDLEAVVDEWATSLFKEMDYLNE 272

Query:   242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE 281
             A N  +F++ +     + VPK++   S  +VL MEW+ G+
Sbjct:   273 AQNGIKFRKLYGGIKDVLVPKMYTEYSTSKVLVMEWVEGQ 312

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2177719 ATH13 "AT5G64940" [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 115/311 (36%), Positives = 166/311 (53%)

Query:    93 LKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSP 152
             LKE +L LGPTFIK+GQ  STR DI+  +    LSEL DQ+PPFP + A+ I+EEELG  
Sbjct:   222 LKENILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSATALSIVEEELGGS 281

Query:   153 VESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQ 212
             VE  F     EP+AAAS GQV+R + L G  V +KVQRP L+ +   D+  LR+    LQ
Sbjct:   282 VEDIFDRFDYEPIAAASLGQVHR-ARLKGQEVVLKVQRPGLKDLFDIDLKNLRVIAEYLQ 340

Query:   213 KIAKR----KSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLS 268
             K+  +    K D     DE    L  E+DYT EAAN+  F  +     ++ VP ++   +
Sbjct:   341 KVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANSELFANNFKDLEYVKVPSIYWEYT 400

Query:   269 RKRVLTMEWMVGESPTDLIXXXXXXXXXXXXXHLDRQKLDAKWRLLDLVNKGVEATLVQL 328
               +VLTME++ G     +               LD+  +D K RL       VE+ L Q+
Sbjct:   401 TPQVLTMEYVPGIKINKIQA-------------LDQLGVDRK-RL---GRYAVESYLEQI 443

Query:   329 LETGILHADPHPGNLRY--TSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLV 386
             L  G  HADPHPGN+     + G++ F DFG++  +    +  +L +   +   D   ++
Sbjct:   444 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKDPDKVL 503

Query:   387 HSLTEMDVVRP 397
              ++ +M V+ P
Sbjct:   504 QAMVQMGVLVP 514

GO:0005215 "transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006810 "transport" evidence=ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

TIGR_CMR|SPO_0144 SPO_0144 "2-polyprenylphenol 6-hydroxylase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 111/338 (32%), Positives = 162/338 (47%)

Query:    97 VLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESF 156
             ++ +GP +IK GQ LSTRPD++G D++  L  L DQ+PPFPR++AM+ +E+ELG P+   
Sbjct:    65 LMAMGPAYIKFGQVLSTRPDVVGQDLADQLRVLQDQLPPFPRAVAMREVEKELGRPLPEM 124

Query:   157 FSFISEEPVAAASFGQVYRGSTLD-GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIA 215
             FS  SE P+AAAS  QV+R    D G  VAVKV RP +     +D+        ++   A
Sbjct:   125 FSEFSE-PIAAASIAQVHRARLADSGEDVAVKVLRPGIERAFRKDVDAFYFAARIVDLFA 183

Query:   216 KRKSDLR-LYADELGKGLV-GELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVL 273
                  LR +   E   G+V GELD  LE+A ASEF ++        +P V   LS +RV+
Sbjct:   184 PGARRLRPMEVIEHFDGVVRGELDLRLESAAASEFADNTKEDAGFRLPPVRWSLSARRVM 243

Query:   274 TMEWMVGESPTDLIXXXXXXXXXXXXXHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGI 333
             T+ W  G    D               H +R+ L    R+L L        L+  L  G 
Sbjct:   244 TLGWADGVPLGD-------NAALDAAGH-NRRDLGE--RVLRLF-------LLHALRDGF 286

Query:   334 LHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD 393
              HAD H GNL+  + G I   DFG++  ++   +      +   +  D++ +     E  
Sbjct:   287 FHADMHQGNLKVAADGDIIAYDFGIMGHIDEYTRRVYAEILFGFIRRDYKRVAEVHFEAG 346

Query:   394 VVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVRS 431
              V P T  +        A+GE  F      +   R+ S
Sbjct:   347 YV-PATQDVDEFARALRAVGEPIFGMDATHISMGRLLS 383

GO:0006744 "ubiquinone biosynthetic process" evidence=ISS

GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=ISS

UNIPROTKB|Q3ACS7 CHY_1218 "ABC1 family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 373 (136.4 bits), Expect = 2.3e-34, P = 2.3e-34
 Identities = 98/303 (32%), Positives = 154/303 (50%)

Query:    93 LKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSP 152
             L+E +  LGPTFIK+GQ LST+ D++       L +L D++ P P  +    IE+ LGSP
Sbjct:    54 LREMLEKLGPTFIKLGQVLSTQRDLLPKPFQAELEKLQDRVTPVPFEVIASYIEKNLGSP 113

Query:   153 VESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYIL-RIGLGLL 211
             +   F    E P+A+AS GQVYR    +G  V VKV+RP +  ++  D+ IL +I   + 
Sbjct:   114 LHDIFIEFDENPIASASIGQVYRAKLKNGKNVVVKVKRPGVDELIKTDLQILYQIASFIQ 173

Query:   212 QKI--AKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR 269
              K    K    LR++ +EL   L  ELDYT EA N   F+++   +  + +P+VF   + 
Sbjct:   174 NKTNWGKINKPLRMW-EELKSSLERELDYTGEARNIENFRQNIK-YKKLIIPEVFWNFTN 231

Query:   270 KRVLTMEWMVGESPTDLIXXXXXXXXXXXXXHLDRQKLDAKWRLLDLVNKGVEATLVQLL 329
             + +L +E + G   ++                L    +D      DLV    E  ++Q+L
Sbjct:   232 ENILVLEAVYGIKVSERF-------------QLIEMGIDLDQLARDLV----EIFILQIL 274

Query:   330 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL 389
             E G  HADPHPGN+  T  G I   DFG++  +    +  ++  ++ +V  D+  +   L
Sbjct:   275 EDGYFHADPHPGNIAITPLGDIILYDFGMVGFLNPWLREILITLLISVVRKDFARISELL 334

Query:   390 TEM 392
              E+
Sbjct:   335 IEL 337

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CHY_1218 CHY_1218 "ABC1 family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 373 (136.4 bits), Expect = 2.3e-34, P = 2.3e-34
 Identities = 98/303 (32%), Positives = 154/303 (50%)

Query:    93 LKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSP 152
             L+E +  LGPTFIK+GQ LST+ D++       L +L D++ P P  +    IE+ LGSP
Sbjct:    54 LREMLEKLGPTFIKLGQVLSTQRDLLPKPFQAELEKLQDRVTPVPFEVIASYIEKNLGSP 113

Query:   153 VESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYIL-RIGLGLL 211
             +   F    E P+A+AS GQVYR    +G  V VKV+RP +  ++  D+ IL +I   + 
Sbjct:   114 LHDIFIEFDENPIASASIGQVYRAKLKNGKNVVVKVKRPGVDELIKTDLQILYQIASFIQ 173

Query:   212 QKI--AKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR 269
              K    K    LR++ +EL   L  ELDYT EA N   F+++   +  + +P+VF   + 
Sbjct:   174 NKTNWGKINKPLRMW-EELKSSLERELDYTGEARNIENFRQNIK-YKKLIIPEVFWNFTN 231

Query:   270 KRVLTMEWMVGESPTDLIXXXXXXXXXXXXXHLDRQKLDAKWRLLDLVNKGVEATLVQLL 329
             + +L +E + G   ++                L    +D      DLV    E  ++Q+L
Sbjct:   232 ENILVLEAVYGIKVSERF-------------QLIEMGIDLDQLARDLV----EIFILQIL 274

Query:   330 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL 389
             E G  HADPHPGN+  T  G I   DFG++  +    +  ++  ++ +V  D+  +   L
Sbjct:   275 EDGYFHADPHPGNIAITPLGDIILYDFGMVGFLNPWLREILITLLISVVRKDFARISELL 334

Query:   390 TEM 392
              E+
Sbjct:   335 IEL 337

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|APH_0984 APH_0984 "2-polyprenylphenol 6-hydroxylase" [Anaplasma phagocytophilum HZ (taxid:212042)]

 Score = 300 (110.7 bits), Expect = 4.6e-33, Sum P(2) = 4.6e-33
 Identities = 80/209 (38%), Positives = 120/209 (57%)

Query:    80 FDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRS 139
             F     + N+G  +   + +LGPTFIK GQ L++R DI+G +++  L  L D++ PFP S
Sbjct:    30 FSNRKHKKNYGERVHLCLRSLGPTFIKFGQFLASRADIVGEEVAGNLLTLCDKLTPFPYS 89

Query:   140 IAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVR 199
               + IIE +    ++  F    EEPVAAAS  QV+R  TLDG + AVKV RP +      
Sbjct:    90 QVVSIIESQFHKKMDEIFLEFDEEPVAAASIAQVHRARTLDGELKAVKVLRPGIEASFRA 149

Query:   200 DIYILR------IGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQES-H 252
             DI ++R        LG+L +  K    + +++D + K L  ELD   EAA+A E +E+  
Sbjct:   150 DIALMRKIADISSALGILSRF-KLPQLVEMFSD-ICK-L--ELDLRFEAASADELRENLR 204

Query:   253 SPFPFIHVPKV-FRYLSRKRVLTMEWMVG 280
             +     +VPKV +++ SR RVLT++W+ G
Sbjct:   205 AESSDFYVPKVDWKHTSR-RVLTLQWVEG 232

GO:0006744 "ubiquinone biosynthetic process" evidence=ISS

GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	433
COG0661	517	COG0661, AarF, Predicted unusual protein kinase [G	1e-86
TIGR01982	437	TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase	1e-71
PRK04750	537	PRK04750, ubiB, putative ubiquinone biosynthesis p	3e-43
pfam03109	117	pfam03109, ABC1, ABC1 family	5e-42
COG2334	331	COG2334, COG2334, Putative homoserine kinase type	0.003

>gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only]

 Score =  273 bits (700), Expect = 1e-86
 Identities = 129/363 (35%), Positives = 192/363 (52%), Gaps = 22/363 (6%)

Query: 41  RPHIVGLRLLEVGSCFLSAVIRIRTSRIRKFLRSDLEKDFDGN-ISQYNFGMILKETVLN 99
            P I+ +RL  +    L  +   R + + + L    +     +   +      L+  +  
Sbjct: 10  LPRIIRVRLRYLLG-RLLRLTG-RLALLLRLLSWLGKSKLASSEELREKRAERLRLALEE 67

Query: 100 LGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSF 159
           LGPTFIK+GQ LSTRPD++  + ++ L++L D++PPFP   A +IIEEELG P+E  FS 
Sbjct: 68  LGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSE 127

Query: 160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKS 219
              EP+A+AS  QV+R     G  VAVKVQRP +R  +  D+ +LR    L++++     
Sbjct: 128 FEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGR 187

Query: 220 DLRLY--ADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEW 277
            L L    DE  K L  ELDY  EAANA  F+E+    P ++VPKV+   + +RVLTMEW
Sbjct: 188 RLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEW 247

Query: 278 MVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHAD 337
           + G   +D+ +             L    +D K    +L    V A L QLL  G  HAD
Sbjct: 248 IDGIKISDIAA-------------LKSAGIDRK----ELAELLVRAFLRQLLRDGFFHAD 290

Query: 338 PHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP 397
           PHPGN+   S G+I  LDFG++ R++ K +  +   ++  +N D+  +     E+  V P
Sbjct: 291 PHPGNILVRSDGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPP 350

Query: 398 GTN 400
            T+
Sbjct: 351 DTD 353

Length = 517

>gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase

 Score =  231 bits (591), Expect = 1e-71
 Identities = 120/344 (34%), Positives = 178/344 (51%), Gaps = 24/344 (6%)

Query: 90  GMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEEL 149
           G  L+  +  LGPTFIK GQ+LSTR D++ +DI++ LS L D++PPF   +A K+IE  L
Sbjct: 50  GERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAAL 109

Query: 150 GSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLG 209
           G P+E  F+   E+P+AAAS  QV+R   +DG  VAVKV RP +   +  DI +L     
Sbjct: 110 GGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLAR 169

Query: 210 LLQKIAKRKSDLR--LYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYL 267
           ++++++     LR      E  K L  ELD   EAANASE  E+    P ++VP+V+   
Sbjct: 170 IVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDR 229

Query: 268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR-LLDLVNKGVEATLV 326
           + +RVLTMEW+ G      I LS            D   LD        L      + L 
Sbjct: 230 TSERVLTMEWIDG------IPLS------------DIAALDEAGLDRKALAENLARSFLN 271

Query: 327 QLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVH-IVNGDWQSL 385
           Q+L  G  HAD HPGN+     G+I  LDFG++ R+  + +   LA I++  +N D++ +
Sbjct: 272 QVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSEEDRRY-LAEILYGFLNRDYRRV 330

Query: 386 VHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRV 429
                +   V   T+       +  A+GE  F   + ++   R+
Sbjct: 331 AEVHFDAGYVPSDTDMAEFEQAIR-AIGEPIFGQPLKEISVGRL 373

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437

>gnl|CDD|235310 PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed

 Score =  158 bits (403), Expect = 3e-43
 Identities = 94/274 (34%), Positives = 132/274 (48%), Gaps = 42/274 (15%)

Query: 100 LGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSF 159
           LGP F+K GQ LSTR D+   DI+  L+ L D++PPF  ++A  IIE+ LG PVE +F  
Sbjct: 62  LGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDD 121

Query: 160 ISEEPVAAASFGQVYRGSTLD-GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKI---A 215
              +P+A+AS  QV+     D G  V VKV RP++  V+  D+ ++      ++++    
Sbjct: 122 FDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDG 181

Query: 216 KRKSDLRL--YADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVL 273
           +R   L+      E  K L  ELD   EAANAS+ + +      ++VP+V+     + V+
Sbjct: 182 RR---LKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVM 238

Query: 274 TMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGI 333
            ME M G  P         S V      L     D K     L  +GVE    Q+   G 
Sbjct: 239 VMERMYG-IPV--------SDVA----ALRAAGTDMK----LLAERGVEVFFTQVFRDGF 281

Query: 334 LHADPHPGNL----------RYTSSGQIGFLDFG 357
            HAD HPGN+          RY     I  LDFG
Sbjct: 282 FHADMHPGNIFVSYDPPENPRY-----IA-LDFG 309

Length = 537

>gnl|CDD|111949 pfam03109, ABC1, ABC1 family

 Score =  143 bits (364), Expect = 5e-42
 Identities = 53/118 (44%), Positives = 74/118 (62%), Gaps = 1/118 (0%)

Query: 147 EELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRI 206
           EELG+PVE  F+   EEP+AAAS  QV+R    DG  VAVKVQRP ++  +  D+ +L+ 
Sbjct: 1   EELGAPVEEVFAEFDEEPIAAASIAQVHRAVLKDGEEVAVKVQRPGVKKRIRSDLKLLKF 60

Query: 207 GLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVF 264
              +L+K      DL    DE  K L  ELD+  EAANA +F+E+ +  P+++VPKV+
Sbjct: 61  LAKILKKFFPGF-DLDWLVDEFRKSLPQELDFLREAANAEKFRENFADLPWVYVPKVY 117

This family includes ABC1 from yeast and AarF from E. coli. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex and E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins. Length = 117

>gnl|CDD|225213 COG2334, COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 301 HLDRQKLDAKWR-LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQI-GFLDFG 357
            ++ + L A     LD +   + A L  L    I+H D HP N+ +     + GF+DF 
Sbjct: 167 LVEPEDLRAALLAALDRLLARLPAHLPAL-GDQIIHGDLHPDNVLFDDDTDVSGFIDFD 224

Length = 331

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	433
COG0661	517	AarF Predicted unusual protein kinase [General fun	100.0
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	100.0
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	100.0
KOG1235	538	consensus Predicted unusual protein kinase [Genera	100.0
KOG1236	565	consensus Predicted unusual protein kinase [Genera	100.0
KOG1234	363	consensus ABC (ATP binding cassette) 1 protein [Ge	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.94
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	99.94
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.9
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.89
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.89
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.88
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.87
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.87
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.86
KOG0605	550	consensus NDR and related serine/threonine kinases	99.86
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.86
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.85
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.85
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.85
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.84
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.84
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.84
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.84
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.84
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.84
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.83
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.83
KOG0578	550	consensus p21-activated serine/threonine protein k	99.83
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.83
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.82
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.82
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.82
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.81
smart00090	237	RIO RIO-like kinase.	99.81
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.81
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.81
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.8
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.8
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.8
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.79
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.79
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.79
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.79
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.78
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.78
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.78
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.78
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.78
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.78
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.78
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.78
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.78
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.78
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.77
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.77
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.77
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.77
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.77
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.77
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.77
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.77
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.77
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.76
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.76
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.76
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.76
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.76
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.76
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.76
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.76
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.76
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.75
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.75
KOG0198	313	consensus MEKK and related serine/threonine protei	99.75
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.75
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.75
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.75
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.75
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.75
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.75
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.75
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.75
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.75
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.74
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.74
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.74
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.74
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.74
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.74
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.74
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.73
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.73
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.73
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.73
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.73
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.73
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.73
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.73
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.73
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.73
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.73
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.72
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.72
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.72
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.72
PTZ00283	496	serine/threonine protein kinase; Provisional	99.72
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.71
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.71
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.71
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.71
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.71
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.71
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.71
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.71
PRK09188	365	serine/threonine protein kinase; Provisional	99.71
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.71
PTZ00267	478	NIMA-related protein kinase; Provisional	99.7
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.7
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.7
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.7
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.7
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.7
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.7
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.69
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.69
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.69
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.69
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.69
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.69
KOG0610	459	consensus Putative serine/threonine protein kinase	99.69
PHA03212	391	serine/threonine kinase US3; Provisional	99.69
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.68
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.68
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.68
PRK14879	211	serine/threonine protein kinase; Provisional	99.68
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.68
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.68
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.68
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.68
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.68
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.68
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.68
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.68
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.68
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.68
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.68
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.68
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.68
PTZ00036	440	glycogen synthase kinase; Provisional	99.68
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.68
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.67
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.67
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.67
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.67
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.67
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.67
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.67
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.67
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.67
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.67
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.67
KOG0586	596	consensus Serine/threonine protein kinase [General	99.67
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.67
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.67
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.67
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.67
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.67
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.67
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.67
PTZ00284	467	protein kinase; Provisional	99.67
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.67
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.66
PHA02988	283	hypothetical protein; Provisional	99.66
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.66
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.66
KOG0589	426	consensus Serine/threonine protein kinase [General	99.66
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.66
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.66
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.66
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.66
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.66
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.66
PHA02882	294	putative serine/threonine kinase; Provisional	99.66
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.66
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.66
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.66
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.66
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.66
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.66
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.66
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.66
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.66
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.66
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.65
PHA03207	392	serine/threonine kinase US3; Provisional	99.65
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.65
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.65
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.65
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.65
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.65
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.65
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.64
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.64
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.64
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.64
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.64
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.64
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.64
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.64
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.64
PHA03209	357	serine/threonine kinase US3; Provisional	99.64
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.64
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.64
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.64
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.64
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.64
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.64
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.64
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.64
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.64
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.64
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.63
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.63
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.63
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.63
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.63
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.63
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.63
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.63
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.63
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.63
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.63
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.63
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.63
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.63
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.63
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.63
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.63
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.63
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.62
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.62
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.62
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.62
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.62
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.62
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.62
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.62
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.62
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.62
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.62
PHA03211	461	serine/threonine kinase US3; Provisional	99.62
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.62
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.62
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.62
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.62
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.62
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.62
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.62
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.62
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.62
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.62
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.62
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.62
KOG3653	534	consensus Transforming growth factor beta/activin	99.61
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.61
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.61
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.61
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.61
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.61
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.61
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.61
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.61
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.61
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.61
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.61
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.61
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.61
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.61
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.61
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.61
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.61
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.61
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.61
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.61
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.61
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.61
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.61
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.6
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.6
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.6
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.6
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.6
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.6
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.6
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.6
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.6
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.6
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.6
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.6
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.6
KOG1152	772	consensus Signal transduction serine/threonine kin	99.6
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.6
PRK12274	218	serine/threonine protein kinase; Provisional	99.6
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.6
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.6
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.6
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.59
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.59
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.59
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.59
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.59
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.59
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.59
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.59
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.59
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.58
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.58
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.58
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.58
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.58
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.58
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.58
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.58
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.58
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.58
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.58
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.58
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.58
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.58
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.57
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.57
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.57
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.57
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.57
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.57
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.57
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.57
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.57
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.57
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.57
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.57
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.57
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.57
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.57
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.56
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.56
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.56
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.56
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.56
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.56
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.56
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.56
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.56
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.56
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.56
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.55
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.55
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.55
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.55
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.55
PLN00009	294	cyclin-dependent kinase A; Provisional	99.55
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.55
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.55
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.54
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.54
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.54
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.54
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.54
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.54
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.54
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.53
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.53
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.53
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.53
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.53
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.52
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.52
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.52
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.52
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.52
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.52
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.52
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.52
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.51
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.51
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.51
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.51
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.51
PHA03210	501	serine/threonine kinase US3; Provisional	99.51
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.51
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.51
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.51
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.51
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.5
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.5
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.5
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.5
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.49
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.49
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.48
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.47
PRK10345	210	hypothetical protein; Provisional	99.47
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.47
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.46
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.45
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.45
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.44
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.43
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.43
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.43
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.42
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.42
KOG0584	632	consensus Serine/threonine protein kinase [General	99.42
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.41
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.4
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.39
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.39
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.39
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.38
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.38
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.38
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.38
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.37
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.35
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.32
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	99.32
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.31
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.26
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.26
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.24
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	99.16
KOG3087	229	consensus Serine/threonine protein kinase [General	99.1
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.06
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.96
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.95
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.87
PLN00181	793	protein SPA1-RELATED; Provisional	98.83
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.7
PF01636	239	APH: Phosphotransferase enzyme family This family	98.59
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.58
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.57
PRK10593	297	hypothetical protein; Provisional	98.54
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.48
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.48
PRK05231	319	homoserine kinase; Provisional	98.44
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.43
PRK09902	216	hypothetical protein; Provisional	98.37
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.35
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.34
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.32
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	98.29
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.28
KOG2270	520	consensus Serine/threonine protein kinase involved	98.18
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.15
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.07
PLN02876	822	acyl-CoA dehydrogenase	98.05
PRK06148	1013	hypothetical protein; Provisional	98.03
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.03
PLN02756	418	S-methyl-5-thioribose kinase	98.02
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.01
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	98.0
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	97.98
PRK12396	409	5-methylribose kinase; Reviewed	97.93
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.9
COG2334	331	Putative homoserine kinase type II (protein kinase	97.81
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.8
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.79
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.78
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.64
PRK06149	972	hypothetical protein; Provisional	97.54
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.52
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.45
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	97.38
PLN02236	344	choline kinase	97.38
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	97.31
PRK11768	325	serine/threonine protein kinase; Provisional	97.3
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.3
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.17
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	96.99
KOG0590	601	consensus Checkpoint kinase and related serine/thr	96.97
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.93
KOG1243	690	consensus Protein kinase [General function predict	96.85
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.64
PRK10271	188	thiK thiamine kinase; Provisional	96.25
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.13
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	95.77
PTZ00384	383	choline kinase; Provisional	95.75
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	95.52
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	95.5
KOG1266	458	consensus Protein kinase [Signal transduction mech	95.46
PTZ00296	442	choline kinase; Provisional	95.45
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	94.92
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	93.99
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	93.96
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	93.18
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.08
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	92.96
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	91.29

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=100.00  E-value=2.6e-73  Score=580.86  Aligned_cols=328  Identities=38%  Similarity=0.602  Sum_probs=306.4

Q ss_pred             cchHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccc
Q 013944           86 QYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPV  165 (433)
Q Consensus        86 ~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~dllp~~~~~~L~~lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pi  165 (433)
                      ..+.+++|+++|++|||+|||+||+||||||++|++|+++|++|||++||+|++++++++++++|.+++++|++|+++||
T Consensus        54 ~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~Pi  133 (517)
T COG0661          54 REKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEPI  133 (517)
T ss_pred             hHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCCch
Confidence            44568999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHh--hcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          166 AAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK--RKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       166 gsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~--~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      |+||+||||+|++++|++||||||||++++.+..|+.+|+.++.+++++.+  +..++..+++|+.+++..|+||++||+
T Consensus       134 AsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~  213 (517)
T COG0661         134 ASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAA  213 (517)
T ss_pred             hhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHH
Confidence            999999999999999999999999999999999999999999999999865  457999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEA  323 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~  323 (433)
                      |+++|+++|++.+.++||+|||++|+++||||||++|.++++......             ++.+    ...++..++.+
T Consensus       214 n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-------------~g~d----~k~ia~~~~~~  276 (517)
T COG0661         214 NAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-------------AGID----RKELAELLVRA  276 (517)
T ss_pred             HHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-------------cCCC----HHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999865432             1111    11356667788


Q ss_pred             HHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCCCCChHH
Q 013944          324 TLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLR  403 (433)
Q Consensus       324 ~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~~d~~~  403 (433)
                      +++|++.+||||+|||||||+++++|++.++|||++++++++.+..+.+.+.++.++|+..+++.+.++|.+++..|...
T Consensus       277 f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~~  356 (517)
T COG0661         277 FLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRDP  356 (517)
T ss_pred             HHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhchhccCCCCCcccccccc
Q 013944          404 VTMDLEDALGEVEFKDGIPDVKFSRVRS  431 (433)
Q Consensus       404 ~~~~l~~~l~~~~~~~~~~~~~~~~~l~  431 (433)
                      +..+++.++... ++.++.++++++++.
T Consensus       357 ~~~~i~~~~~~~-~~~~~~~~~~~~~~~  383 (517)
T COG0661         357 LAAAIRAVLEPI-YGKPLEEISFGEILD  383 (517)
T ss_pred             HHHHHHHHHHhh-hCCChhhccHHHHHH
Confidence            999998777554 789999999988763

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=100.00  E-value=7.1e-68  Score=544.69  Aligned_cols=366  Identities=29%  Similarity=0.410  Sum_probs=315.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhh--hhhhhc-c--cccccccccccchHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCH
Q 013944           46 GLRLLEVGSCFLSAVIRIRTSRI--RKFLRS-D--LEKDFDGNISQYNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGS  120 (433)
Q Consensus        46 ~~R~~~~~~~~~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~~~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~dllp~  120 (433)
                      +.|+.+|+..+...++.......  ...+.. .  ..... ........|+++|.+|++|||+|||+||+||||+|++|+
T Consensus         4 ~~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~   82 (537)
T PRK04750          4 LFRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMP-NRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPP   82 (537)
T ss_pred             hHHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhh-cccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCH
Confidence            57888888877777655332211  111100 0  00000 011223568999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecC-CCEEEEEEcCCCchhhHHH
Q 013944          121 DISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD-GSIVAVKVQRPNLRHVVVR  199 (433)
Q Consensus       121 ~~~~~L~~lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~-G~~VAVKv~~p~~~~~~~~  199 (433)
                      +|+++|++|||++||+|++++++++++++|.+++++|.+|+.+|+|+||+||||+|++++ |++|||||++|++.+.+..
T Consensus        83 ~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~  162 (537)
T PRK04750         83 DIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDA  162 (537)
T ss_pred             HHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999977 9999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHh--hcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeec
Q 013944          200 DIYILRIGLGLLQKIAK--RKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEW  277 (433)
Q Consensus       200 Dl~~l~~~~~~~~~~~~--~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~  277 (433)
                      |+.+|+.++.+++++.+  ...++..+++|+.+.+.+|+||..|++|+.+|+++|.+.+.++||++||++|++++|||||
T Consensus       163 Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~  242 (537)
T PRK04750        163 DLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMER  242 (537)
T ss_pred             HHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEee
Confidence            99999999999998754  3457889999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC----cEEE
Q 013944          278 MVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----QIGF  353 (433)
Q Consensus       278 i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g----~l~l  353 (433)
                      ++|++++++.....             .+.+    ...+...++..++.|++.+||||+|||||||+++++|    ++++
T Consensus       243 i~G~~l~d~~~l~~-------------~g~d----~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~l  305 (537)
T PRK04750        243 MYGIPVSDVAALRA-------------AGTD----MKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIA  305 (537)
T ss_pred             ecCccHHhHHHHHh-------------cCCC----HHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEE
Confidence            99999988643211             0011    1134556677889999999999999999999999988    9999


Q ss_pred             EecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhhchhccCCCCCccccccc
Q 013944          354 LDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVKFSRVR  430 (433)
Q Consensus       354 ~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~~d~~~~~~~l~~~l~~~~~~~~~~~~~~~~~l  430 (433)
                      +|||+++.++++.+..+...+.++.++|+..+++.+.++|.+++++|.+.|..++..++. .+++.|+++++|++++
T Consensus       306 lDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~-~~~~~~l~~i~~~~~l  381 (537)
T PRK04750        306 LDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCE-PIFDKPLAEISFGHVL  381 (537)
T ss_pred             EecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH-HHhCCCcccccHHHHH
Confidence            999999999999999999999999999999999999999999999999999999976664 4678999999998875

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=100.00  E-value=1.7e-65  Score=521.63  Aligned_cols=326  Identities=34%  Similarity=0.514  Sum_probs=297.1

Q ss_pred             chHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCcccc
Q 013944           87 YNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVA  166 (433)
Q Consensus        87 ~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~dllp~~~~~~L~~lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pig  166 (433)
                      ...|++++++|++|||+|||+||++|||+|++|++|+++|++|||++||+|++++++++++++|.+++++|.+|+++|+|
T Consensus        47 ~~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~pla  126 (437)
T TIGR01982        47 MSRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLA  126 (437)
T ss_pred             ccHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCccee
Confidence            46689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHh--hcCCHHHHHHHHHHHhHhhhchHHHHHH
Q 013944          167 AASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK--RKSDLRLYADELGKGLVGELDYTLEAAN  244 (433)
Q Consensus       167 sgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~--~~~~~~~~~~e~~~~l~~Eld~~~Ea~n  244 (433)
                      +||+||||+|++++|+.||||+++|++.+.+..|+.+++.++.++.+..+  ...++..+++|+...+.+|+||.+|++|
T Consensus       127 saSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n  206 (437)
T TIGR01982       127 AASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAAN  206 (437)
T ss_pred             eeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHH
Confidence            99999999999999999999999999999999999999999998888754  3357889999999999999999999999


Q ss_pred             HHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHH
Q 013944          245 ASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEAT  324 (433)
Q Consensus       245 ~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~  324 (433)
                      +.+|++.+++.+.+.+|++|+++|++++|||||++|++|.++......             ..+.    ..++...+..+
T Consensus       207 ~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-------------~~~~----~~ia~~~~~~~  269 (437)
T TIGR01982       207 ASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-------------GLDR----KALAENLARSF  269 (437)
T ss_pred             HHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-------------CCCH----HHHHHHHHHHH
Confidence            999999999999999999999999999999999999999987653210             0000    12333344567


Q ss_pred             HHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCCCCChHHH
Q 013944          325 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRV  404 (433)
Q Consensus       325 l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~~d~~~~  404 (433)
                      +.++|..|++|+|||||||+++++|+++++|||+++.++++.+..+.+++.++.++|+..+++.+.++|+.+++.|...+
T Consensus       270 l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~  349 (437)
T TIGR01982       270 LNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEF  349 (437)
T ss_pred             HHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhchhccCCCCCccccccc
Q 013944          405 TMDLEDALGEVEFKDGIPDVKFSRVR  430 (433)
Q Consensus       405 ~~~l~~~l~~~~~~~~~~~~~~~~~l  430 (433)
                      ..++..++..+ .+.++.++++++++
T Consensus       350 ~~~~~~~~~~~-~~~~~~~~~~~~~~  374 (437)
T TIGR01982       350 EQAIRAIGEPI-FGQPLKEISVGRLL  374 (437)
T ss_pred             HHHHHHHHHHH-hCCChhhCCHHHHH
Confidence            99998887654 56788888887654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=100.00  E-value=2.6e-64  Score=512.20  Aligned_cols=303  Identities=41%  Similarity=0.567  Sum_probs=277.4

Q ss_pred             hHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccccc
Q 013944           88 NFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAA  167 (433)
Q Consensus        88 ~~~~~l~~~l~~lg~~~iK~gQ~ls~r~dllp~~~~~~L~~lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigs  167 (433)
                      ..+++|+++++.|||+|||+||.+|||+|++|+||.++|+.|||++||+|++++.+++++|+|.+++++|++|+++|||+
T Consensus        92 ~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaa  171 (538)
T KOG1235|consen   92 SAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAA  171 (538)
T ss_pred             HHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhh
Confidence            34589999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHH
Q 013944          168 ASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASE  247 (433)
Q Consensus       168 gS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~  247 (433)
                      ||+||||+|++++|+.||||||||++++.+..|+.+++.++.+++++.+.. ++.+++||+++++.+|+||.+||+|+++
T Consensus       172 ASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~-~~~~lvdE~~~~L~~ELDF~~EA~Nae~  250 (538)
T KOG1235|consen  172 ASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDF-DLVWLVDEIAKSLPQELDFTKEAKNAER  250 (538)
T ss_pred             cchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCC-chhhHHHHHHhhhHhhcchHHHHHhHHH
Confidence            999999999999999999999999999999999999999999999986544 5999999999999999999999999999


Q ss_pred             HHHhcCCCC---CeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHH
Q 013944          248 FQESHSPFP---FIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEAT  324 (433)
Q Consensus       248 ~~~~~~~~~---~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~  324 (433)
                      |+++|++.+   .+.||+|||++|+++|||||||+|.+++|.....+             .+++..    +++...+.++
T Consensus       251 ~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~-------------~gi~~~----~i~~~l~~~~  313 (538)
T KOG1235|consen  251 FRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK-------------RGISPH----DILNKLVEAY  313 (538)
T ss_pred             HHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH-------------cCCCHH----HHHHHHHHHH
Confidence            999999998   79999999999999999999999999999876542             112111    4566777889


Q ss_pred             HHHHHHCCccccCCCCCceEEcc----CCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCCCCC
Q 013944          325 LVQLLETGILHADPHPGNLRYTS----SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTN  400 (433)
Q Consensus       325 l~~lh~~givH~DlhpgNilv~~----~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~~d  400 (433)
                      +.||+..||||+|||||||++++    ++++++.|||+++.++...|..+..++.++...|...+......+|... +.+
T Consensus       314 ~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~-d~~  392 (538)
T KOG1235|consen  314 LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL-DDL  392 (538)
T ss_pred             HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc-chh
Confidence            99999999999999999999984    5789999999999999999999999999999988888888888888876 666


Q ss_pred             hHHHHHHHH
Q 013944          401 TLRVTMDLE  409 (433)
Q Consensus       401 ~~~~~~~l~  409 (433)
                      ...|..++.
T Consensus       393 ~~~fa~~l~  401 (538)
T KOG1235|consen  393 YPLFATALT  401 (538)
T ss_pred             hhhhHHHHh
Confidence            666666654

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=100.00  E-value=1.7e-45  Score=353.95  Aligned_cols=329  Identities=24%  Similarity=0.338  Sum_probs=292.4

Q ss_pred             chHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCC-ChhhhccccCCccc
Q 013944           87 YNFGMILKETVLNLGPTFIKVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGS-PVESFFSFISEEPV  165 (433)
Q Consensus        87 ~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~dllp~~~~~~L~~lqd~~p~~~~~~~~~~l~~elg~-~~~~~f~~~~~~pi  165 (433)
                      .-|-+.|+.+++..||+|||+|||.|||+|++++.+|.+|++||.+++|+++.-.++.+.+++|. .++++|.+|++.||
T Consensus       118 ~lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PI  197 (565)
T KOG1236|consen  118 TLWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPI  197 (565)
T ss_pred             HHHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCccc
Confidence            45678899999999999999999999999999999999999999999999999999999999997 89999999999999


Q ss_pred             cccccceeEEEEec-------C---------CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhh-cCCHHHHHHHH
Q 013944          166 AAASFGQVYRGSTL-------D---------GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKR-KSDLRLYADEL  228 (433)
Q Consensus       166 gsgS~gqVy~a~l~-------~---------G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~-~~~~~~~~~e~  228 (433)
                      |+|+++|||+|+++       +         .+.||||+.+|+++.++..|+.+|+..+.+.+.++.. ..++...++.|
T Consensus       198 GsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF  277 (565)
T KOG1236|consen  198 GSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQF  277 (565)
T ss_pred             ccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHH
Confidence            99999999999752       1         2689999999999999999999999999888876543 34566778999


Q ss_pred             HHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhH
Q 013944          229 GKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLD  308 (433)
Q Consensus       229 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~  308 (433)
                      .-.+..++|.++||.|+.+|..+|+....+.+|+++..+.++.+|+-+|.+|.++..+++..+++         +    .
T Consensus       278 ~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~p---------e----~  344 (565)
T KOG1236|consen  278 SVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQP---------E----A  344 (565)
T ss_pred             HHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhcccCh---------H----H
Confidence            99999999999999999999999999999999999999999999999999999999888754321         1    1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC----------------------------------------
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS----------------------------------------  348 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~----------------------------------------  348 (433)
                      ..+   .+...++.+.++++..++|+|+|+|||||++..+                                        
T Consensus       345 l~k---kva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~  421 (565)
T KOG1236|consen  345 LVK---KVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDL  421 (565)
T ss_pred             HHH---HHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccc
Confidence            222   2344556778899999999999999999998532                                        


Q ss_pred             ---CcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHhhchhccCCCCCcc
Q 013944          349 ---GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDALGEVEFKDGIPDVK  425 (433)
Q Consensus       349 ---g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~~d~~~~~~~l~~~l~~~~~~~~~~~~~  425 (433)
                         .+++++|-|++..+++..+.++..++.++...|-+.++..+.+..-.....|.+.|...++.++.+.-....++.++
T Consensus       422 ~~~P~lvflDtGiv~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~st~sl~tl~  501 (565)
T KOG1236|consen  422 EYEPTLVFLDTGIVTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARSTKSLRTLN  501 (565)
T ss_pred             cCCCeEEEecchhhhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhhhcccCcCc
Confidence               35899999999999999999999999999999999999999998887888999999999999998776567788888


Q ss_pred             cccccc
Q 013944          426 FSRVRS  431 (433)
Q Consensus       426 ~~~~l~  431 (433)
                      ++++|.
T Consensus       502 i~~ll~  507 (565)
T KOG1236|consen  502 IGDLLS  507 (565)
T ss_pred             HHHHHH
Confidence            887763

>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]

Probab=100.00  E-value=1e-32  Score=252.98  Aligned_cols=267  Identities=25%  Similarity=0.288  Sum_probs=235.3

Q ss_pred             HhcCC-CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEc
Q 013944          111 LSTRP-DIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQ  189 (433)
Q Consensus       111 ls~r~-dllp~~~~~~L~~lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~  189 (433)
                      ||... -++|+...+.+++.+..+..+|..++.+++..++|.+|.+-|++|++.|.+++|+||||+|++++|.+||||+|
T Consensus         2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ   81 (363)
T KOG1234|consen    2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ   81 (363)
T ss_pred             cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence            34443 38999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCC
Q 013944          190 RPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR  269 (433)
Q Consensus       190 ~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~  269 (433)
                      +|++.+.+..|+..+..++++-..+ +.+.-+...++..++.+..|+||..||....+|+..+++++.++||.|+.++||
T Consensus        82 YPGva~sI~SD~~nl~~lLn~s~ll-PkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~Elct  160 (363)
T KOG1234|consen   82 YPGVARSIDSDANNLSRLLNFSGLL-PKGLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVDELCT  160 (363)
T ss_pred             CCchhhhccCcHHHHHHHHhhcccc-cccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHHhhcc
Confidence            9999999999999888766654433 445567788888899999999999999999999999999999999999999999


Q ss_pred             ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC-
Q 013944          270 KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-  348 (433)
Q Consensus       270 ~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~-  348 (433)
                      .++++||++.|.++.....            .++..+..+..       +.+..+|+.++...|+..||.-+|++.+.. 
T Consensus       161 ~rvlt~el~~G~pid~~~~------------~sQ~~rn~i~~-------~~l~lcLrEif~f~fMQTDPNWsNFly~~~t  221 (363)
T KOG1234|consen  161 VRVLTLELGQGLPIDKTAK------------LSQETRNYIGY-------KLLELCLREIFEFRFMQTDPNWSNFLYNGRT  221 (363)
T ss_pred             chhhhhhhhcCccchhhhc------------ccHHHHHHHHH-------HHHHHHHHHHHHHhhhcCCCCHHHhccCCCc
Confidence            9999999999988865432            23333333322       334457899999999999999999999754 


Q ss_pred             CcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCC
Q 013944          349 GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       349 g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~  397 (433)
                      .++.|+|||.++.+..+.-..+++++.+...+|.+.+.+--.++|+++.
T Consensus       222 k~i~LlDFGAsr~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg  270 (363)
T KOG1234|consen  222 KKIELLDFGASREYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLTG  270 (363)
T ss_pred             ceEEEEeccccccccHHHHHHHHHHHHHHHhcchHHHHHHHHHhccccc
Confidence            6799999999999999999999999999999999999999999999874

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.94  E-value=5.7e-27  Score=225.47  Aligned_cols=193  Identities=20%  Similarity=0.242  Sum_probs=137.9

Q ss_pred             hccccCCccccccccceeEEEEe-cCCCEEEEEEcCCC-----chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 013944          156 FFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPN-----LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELG  229 (433)
Q Consensus       156 ~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~-----~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~  229 (433)
                      +-+|.....||+||||.||+|++ ++|..||||.+...     ..+....|+.+|+.                       
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLke-----------------------   65 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKE-----------------------   65 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHh-----------------------
Confidence            34455566699999999999996 58899999976533     23333444444441                       


Q ss_pred             HHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          230 KGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       230 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                            +    .|.|++++.+......             ..+||||||+||+|++++...+.++               
T Consensus        66 ------l----~H~nIV~l~d~~~~~~-------------~i~lVMEyC~gGDLs~yi~~~~~l~---------------  107 (429)
T KOG0595|consen   66 ------L----KHPNIVRLLDCIEDDD-------------FIYLVMEYCNGGDLSDYIRRRGRLP---------------  107 (429)
T ss_pred             ------c----CCcceeeEEEEEecCC-------------eEEEEEEeCCCCCHHHHHHHcCCCC---------------
Confidence                  1    2556666665554444             4499999999999999998765443               


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC------CcEEEEecccccccCHHHHHHHHHHHHHHHhcCHH
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS------GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQ  383 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~------g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~  383 (433)
                       +...+.+..|++++++.||+++|+|||+||.|||++..      -.+||+|||+++.+.+..   +.    ..+.+..-
T Consensus       108 -e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~---~a----~tlcGSpl  179 (429)
T KOG0595|consen  108 -EATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS---MA----ETLCGSPL  179 (429)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh---HH----HHhhCCcc
Confidence             12335677889999999999999999999999999864      469999999999998643   22    23444455


Q ss_pred             HHHHHHHhcCCCCCCCChHHHHHHHHHHh-hchhc
Q 013944          384 SLVHSLTEMDVVRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       384 ~~~~~l~~~g~~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      .|+..+...+-+..+.|+|+++..+.+.+ |...|
T Consensus       180 YMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf  214 (429)
T KOG0595|consen  180 YMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPF  214 (429)
T ss_pred             ccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCc
Confidence            66666666666677777777777776555 44443

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=99.94  E-value=3e-27  Score=197.99  Aligned_cols=118  Identities=41%  Similarity=0.603  Sum_probs=112.7

Q ss_pred             HHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhh-cCCHHHHH
Q 013944          147 EELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKR-KSDLRLYA  225 (433)
Q Consensus       147 ~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~-~~~~~~~~  225 (433)
                      ++||.+++++|++|+++|||+||+||||+|++++|++|||||+||++.+.+..|+.+|+.++.++.++... ..++..++
T Consensus         1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~   80 (119)
T PF03109_consen    1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIV   80 (119)
T ss_pred             CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHH
Confidence            47899999999999999999999999999999999999999999999999999999999999999887654 57999999


Q ss_pred             HHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceee
Q 013944          226 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVF  264 (433)
Q Consensus       226 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~  264 (433)
                      +|+.+.+.+|+||++|++|+.+|++++++.+.++||++|
T Consensus        81 ~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy  119 (119)
T PF03109_consen   81 DEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY  119 (119)
T ss_pred             HHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence            999999999999999999999999999999999999987

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.90  E-value=1.5e-23  Score=194.84  Aligned_cols=174  Identities=18%  Similarity=0.224  Sum_probs=123.6

Q ss_pred             ccccccccceeEEEEec-CCCEEEEEEcCCC-----chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          163 EPVAAASFGQVYRGSTL-DGSIVAVKVQRPN-----LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~-----~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+|+||||.|++++.+ +|+.||||.....     +.+...+++++|+       .                       
T Consensus         8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLK-------q-----------------------   57 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLK-------Q-----------------------   57 (396)
T ss_pred             hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHH-------h-----------------------
Confidence            46999999999999964 8999999976533     3333344444444       2                       


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                         ..+.|++.+.+.|+....+             +||.|||+-.-|.++.....|.+                ..+..-
T Consensus        58 ---LkH~NLVnLiEVFrrkrkl-------------hLVFE~~dhTvL~eLe~~p~G~~----------------~~~vk~  105 (396)
T KOG0593|consen   58 ---LKHENLVNLIEVFRRKRKL-------------HLVFEYCDHTVLHELERYPNGVP----------------SELVKK  105 (396)
T ss_pred             ---cccchHHHHHHHHHhccee-------------EEEeeecchHHHHHHHhccCCCC----------------HHHHHH
Confidence               2455888887777655544             99999999887777766555543                112233


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVR  396 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~  396 (433)
                      +..++..++.++|+++++|||+||+|||++.+|.+||||||+++.+.... ..+.+.    +...|+...+.+..---..
T Consensus       106 ~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg-d~YTDY----VATRWYRaPELLvGDtqYG  180 (396)
T KOG0593|consen  106 YLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG-DNYTDY----VATRWYRAPELLVGDTQYG  180 (396)
T ss_pred             HHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCc-chhhhh----hhhhhccChhhhcccCcCC
Confidence            55667789999999999999999999999999999999999999998311 123332    2335666666666544445


Q ss_pred             CCCChHH
Q 013944          397 PGTNTLR  403 (433)
Q Consensus       397 ~~~d~~~  403 (433)
                      +.+|+|+
T Consensus       181 ~pVDiWA  187 (396)
T KOG0593|consen  181 KPVDIWA  187 (396)
T ss_pred             Ccccchh
Confidence            6677773

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.89  E-value=4e-23  Score=188.92  Aligned_cols=186  Identities=21%  Similarity=0.237  Sum_probs=133.1

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCC-----chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPN-----LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~-----~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      |...+.+|+|.||.||+|+ .++|+.||||.++.+     +..+..+|++.|+                           
T Consensus         4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lq---------------------------   56 (318)
T KOG0659|consen    4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQ---------------------------   56 (318)
T ss_pred             hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHH---------------------------
Confidence            4456789999999999999 579999999987653     3334455555555                           


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                            ..+++|+..+.+.|.+...+             .||.||++ .+|..+++.+.-       .+++.+       
T Consensus        57 ------el~h~nIi~LiD~F~~~~~l-------------~lVfEfm~-tdLe~vIkd~~i-------~l~pa~-------  102 (318)
T KOG0659|consen   57 ------ELKHPNIIELIDVFPHKSNL-------------SLVFEFMP-TDLEVVIKDKNI-------ILSPAD-------  102 (318)
T ss_pred             ------HccCcchhhhhhhccCCCce-------------EEEEEecc-ccHHHHhccccc-------ccCHHH-------
Confidence                  33577999999988766665             89999998 577777764321       111111       


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhc
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~  392 (433)
                       .+....++..++.|+|++.|+|||+||.|+|++++|.+|+.|||+++.+....+..--     -+...|+...+.|...
T Consensus       103 -iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~-----~V~TRWYRAPELLfGs  176 (318)
T KOG0659|consen  103 -IKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH-----QVVTRWYRAPELLFGS  176 (318)
T ss_pred             -HHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccccc-----ceeeeeccChHHhccc
Confidence             1234455678999999999999999999999999999999999999998765443211     1334567777777666


Q ss_pred             CCCCCCCChHHHHHHHHHH
Q 013944          393 DVVRPGTNTLRVTMDLEDA  411 (433)
Q Consensus       393 g~~~~~~d~~~~~~~l~~~  411 (433)
                      -....++|+|+++=.+.++
T Consensus       177 r~Yg~~VDmWavGCI~AEL  195 (318)
T KOG0659|consen  177 RQYGTGVDMWAVGCIFAEL  195 (318)
T ss_pred             hhcCCcchhhhHHHHHHHH
Confidence            6666777777544333333

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.89  E-value=1e-23  Score=201.32  Aligned_cols=170  Identities=26%  Similarity=0.293  Sum_probs=117.6

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCC----chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPN----LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~----~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..||+|+-|.||++++ .+|+.+|+|+++-+    +..++.+|+++++.                               
T Consensus        85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~-------------------------------  133 (364)
T KOG0581|consen   85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRS-------------------------------  133 (364)
T ss_pred             hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhh-------------------------------
Confidence            4799999999999997 48999999998544    34444555544441                               


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                        -...+++.|++.|-+...            ...++||||+||+|.+++...+..+                +..+..+
T Consensus       134 --~~spyIV~~ygaF~~~~~------------~isI~mEYMDgGSLd~~~k~~g~i~----------------E~~L~~i  183 (364)
T KOG0581|consen  134 --CQSPYIVGFYGAFYSNGE------------EISICMEYMDGGSLDDILKRVGRIP----------------EPVLGKI  183 (364)
T ss_pred             --CCCCCeeeEeEEEEeCCc------------eEEeehhhcCCCCHHHHHhhcCCCC----------------HHHHHHH
Confidence              022234444443322221            3589999999999999987543222                2234457


Q ss_pred             HHHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHH-----------HHhcCHHHH
Q 013944          318 NKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVH-----------IVNGDWQSL  385 (433)
Q Consensus       318 ~~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~-----------~~~~d~~~~  385 (433)
                      +.+|..+|.|||+ .+|+|||+||.|||++..|++||+|||.++.+.......+..+..+           ....|.|++
T Consensus       184 a~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSL  263 (364)
T KOG0581|consen  184 ARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSL  263 (364)
T ss_pred             HHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecc
Confidence            7888999999996 9999999999999999999999999999998877633333322111           334566666


Q ss_pred             HHHHHhcC
Q 013944          386 VHSLTEMD  393 (433)
Q Consensus       386 ~~~l~~~g  393 (433)
                      +=.+.++.
T Consensus       264 GLsllE~a  271 (364)
T KOG0581|consen  264 GLSLLELA  271 (364)
T ss_pred             cHHHHHHh
Confidence            66555543

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1.5e-23  Score=206.30  Aligned_cols=184  Identities=23%  Similarity=0.275  Sum_probs=127.1

Q ss_pred             hhhccccCCccccccccceeEEEE-ecCCCEEEEEEcCC-----CchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHH
Q 013944          154 ESFFSFISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRP-----NLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADE  227 (433)
Q Consensus       154 ~~~f~~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p-----~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e  227 (433)
                      .+.|+.  .+.||+|.|||||+|+ +.+|+.||+|..+-     +......++|.|||.                     
T Consensus       116 ~~~fek--i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~---------------------  172 (560)
T KOG0600|consen  116 ADSFEK--IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRR---------------------  172 (560)
T ss_pred             hHHHHH--HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHh---------------------
Confidence            444443  3479999999999999 57999999997654     444566777777772                     


Q ss_pred             HHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhh
Q 013944          228 LGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKL  307 (433)
Q Consensus       228 ~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~  307 (433)
                                  ..|+|+.++.+...           ...++..|||.|||+ -+|.-++....       ..+++.   
T Consensus       173 ------------l~HpNIikL~eivt-----------~~~~~siYlVFeYMd-hDL~GLl~~p~-------vkft~~---  218 (560)
T KOG0600|consen  173 ------------LDHPNIIKLEEIVT-----------SKLSGSIYLVFEYMD-HDLSGLLSSPG-------VKFTEP---  218 (560)
T ss_pred             ------------cCCCcccceeeEEE-----------ecCCceEEEEEeccc-chhhhhhcCCC-------cccChH---
Confidence                        24556655543321           124567799999998 45665554211       112222   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHH
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVH  387 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~  387 (433)
                           -+.++++|+..+|.|+|..||+|||+|..|||++.+|.+||.|||+++.++.+....+..-++    .=|+...+
T Consensus       219 -----qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVv----TLWYRpPE  289 (560)
T KOG0600|consen  219 -----QIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVV----TLWYRPPE  289 (560)
T ss_pred             -----HHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceE----EeeccChH
Confidence                 235688889999999999999999999999999999999999999999887766544333221    12445555


Q ss_pred             HHHhcCCCCCCCChHH
Q 013944          388 SLTEMDVVRPGTNTLR  403 (433)
Q Consensus       388 ~l~~~g~~~~~~d~~~  403 (433)
                      .|+..--+...+|+|.
T Consensus       290 LLLG~t~Yg~aVDlWS  305 (560)
T KOG0600|consen  290 LLLGATSYGTAVDLWS  305 (560)
T ss_pred             HhcCCcccccceeehh
Confidence            5554444555666663

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=1.3e-22  Score=204.17  Aligned_cols=191  Identities=23%  Similarity=0.271  Sum_probs=152.6

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEc------CCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQ------RPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~------~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      |--.+-||+|+|+.||+++. .+|+.||+||.      +++.++.+..|+++.+                          
T Consensus        20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr--------------------------   73 (592)
T KOG0575|consen   20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHR--------------------------   73 (592)
T ss_pred             eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHH--------------------------
Confidence            45567899999999999995 89999999985      4566777777777666                          


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                             ...|+|+++|...|++..+|             |||.|.|+.++|..+++..+.++        |.+      
T Consensus        74 -------~L~HpnIV~f~~~FEDs~nV-------------YivLELC~~~sL~el~Krrk~lt--------EpE------  119 (592)
T KOG0575|consen   74 -------SLKHPNIVQFYHFFEDSNNV-------------YIVLELCHRGSLMELLKRRKPLT--------EPE------  119 (592)
T ss_pred             -------hcCCCcEEeeeeEeecCCce-------------EEEEEecCCccHHHHHHhcCCCC--------cHH------
Confidence                   33677999999889888877             99999999999999998554433        111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH-HH------------HHHHHHHHHHH
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK-HQ------------FAMLASIVHIV  378 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~-~~------------~~~~~~~~~~~  378 (433)
                        ...+.+||..|+.|||+.||+|||||-||++++.+.+|||.|||++..+..+ .|            +.++.--.|..
T Consensus       120 --ary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsf  197 (592)
T KOG0575|consen  120 --ARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSF  197 (592)
T ss_pred             --HHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCC
Confidence              2357788999999999999999999999999999999999999999999743 22            22222233466


Q ss_pred             hcCHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q 013944          379 NGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDA  411 (433)
Q Consensus       379 ~~d~~~~~~~l~~~g~~~~~~d~~~~~~~l~~~  411 (433)
                      .-|.|+++..+|.+=+..|+.+...+...+.++
T Consensus       198 EvDiWSlGcvmYtLL~G~PPFetk~vkety~~I  230 (592)
T KOG0575|consen  198 EVDIWSLGCVMYTLLVGRPPFETKTVKETYNKI  230 (592)
T ss_pred             chhhhhhhhHHHhhhhCCCCcccchHHHHHHHH
Confidence            779999999999998888888877766655554

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.1e-22  Score=198.88  Aligned_cols=191  Identities=17%  Similarity=0.213  Sum_probs=137.9

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |.-.+.||.|+||.||+|+ ..+|+.||||.++.....  -.|.-.||. ...+.+                        
T Consensus        12 Y~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~ee~~nLRE-vksL~k------------------------   64 (538)
T KOG0661|consen   12 YTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--WEECMNLRE-VKSLRK------------------------   64 (538)
T ss_pred             HHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--HHHHHHHHH-HHHHHh------------------------
Confidence            3345679999999999999 468999999987644322  112222221 111222                        


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                       .++|.|+.++.+.+.+...            ..++|||||+ ..|.++++.++.+       +++..        +.-+
T Consensus        65 -ln~hpniikL~Evi~d~~~------------~L~fVfE~Md-~NLYqLmK~R~r~-------fse~~--------irni  115 (538)
T KOG0661|consen   65 -LNPHPNIIKLKEVIRDNDR------------ILYFVFEFMD-CNLYQLMKDRNRL-------FSESD--------IRNI  115 (538)
T ss_pred             -cCCCCcchhhHHHhhccCc------------eEeeeHHhhh-hhHHHHHhhcCCc-------CCHHH--------HHHH
Confidence             2356688888777766552            2389999998 7899888755321       22221        2346


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~  397 (433)
                      ..||..+|.++|.+||||||+||+|||+.....|||+|||+++.+....-  +.+    -+...|+.+.+.|++-|+...
T Consensus       116 m~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP--YTe----YVSTRWYRAPEvLLrs~~Ys~  189 (538)
T KOG0661|consen  116 MYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP--YTE----YVSTRWYRAPEVLLRSGYYSS  189 (538)
T ss_pred             HHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCC--cch----hhhcccccchHHhhhccccCC
Confidence            67889999999999999999999999999889999999999999865432  222    244579999999999999999


Q ss_pred             CCChHHHHHHHHHH
Q 013944          398 GTNTLRVTMDLEDA  411 (433)
Q Consensus       398 ~~d~~~~~~~l~~~  411 (433)
                      .+|+|+++-.+.++
T Consensus       190 pvD~wA~GcI~aEl  203 (538)
T KOG0661|consen  190 PVDMWAVGCIMAEL  203 (538)
T ss_pred             chHHHHHHHHHHHH
Confidence            99999776655544

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.86  E-value=3.2e-22  Score=198.49  Aligned_cols=215  Identities=17%  Similarity=0.222  Sum_probs=151.4

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      .-.+-||.|||++|++|+. .+++.+||||+...   -      |++                           ...++|
T Consensus        76 ~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~---~------Iik---------------------------e~KvkY  119 (604)
T KOG0592|consen   76 KFGKILGEGSYSTVVLAREKATGKEYAIKVLDKR---Y------IIK---------------------------EKKVKY  119 (604)
T ss_pred             chhheeccccceeEEEeeecCCCceeeHhhhhHH---H------HHh---------------------------hcccch
Confidence            3456799999999999994 68999999997421   1      111                           011222


Q ss_pred             H-HHHHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          239 T-LEAANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       239 ~-~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      . .|-..+.++.    +++  .|.+.|..+.  ...|.|+||+++|.|-+++..-+.++                ....+
T Consensus       120 V~~Ek~~l~~L~----~hP--givkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfd----------------e~caR  177 (604)
T KOG0592|consen  120 VTREKEALTQLS----GHP--GIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFD----------------ETCAR  177 (604)
T ss_pred             hhHHHHHHHHhh----CCC--CeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcch----------------HHHHH
Confidence            2 1222222221    223  3445555443  56799999999999999998654433                12234


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHH-------HHHHHHHHhcCHHHHHHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAM-------LASIVHIVNGDWQSLVHS  388 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~-------~~~~~~~~~~d~~~~~~~  388 (433)
                      ..+.+|..+++|||.+||||||+||+|||++.||+++|.|||.++.+++.....-       ...-....-+....+...
T Consensus       178 ~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPE  257 (604)
T KOG0592|consen  178 FYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPE  257 (604)
T ss_pred             HHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHH
Confidence            5677788999999999999999999999999999999999999999987654300       000001223445567788


Q ss_pred             HHhcCCCCCCCChHHHHHHHHHHh-hchhccCCCCCccccccccC
Q 013944          389 LTEMDVVRPGTNTLRVTMDLEDAL-GEVEFKDGIPDVKFSRVRSI  432 (433)
Q Consensus       389 l~~~g~~~~~~d~~~~~~~l~~~l-~~~~~~~~~~~~~~~~~l~~  432 (433)
                      ++.-+...+..|+|.|+=.++++| |.+.|.....-..|.+|+.|
T Consensus       258 lL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l  302 (604)
T KOG0592|consen  258 LLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL  302 (604)
T ss_pred             HhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh
Confidence            888888999999998888887776 77888777777777777655

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.86  E-value=2.5e-21  Score=192.18  Aligned_cols=211  Identities=16%  Similarity=0.211  Sum_probs=136.8

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...++||.|+||+||.|+- .+|..+|+|+++.....                                          -
T Consensus       144 e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~------------------------------------------~  181 (550)
T KOG0605|consen  144 ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEML------------------------------------------K  181 (550)
T ss_pred             hhheeeccccceeEEEEEEccCCcEEeeecccHHHHH------------------------------------------h
Confidence            3467999999999999995 58999999998742110                                          0


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      +.+..|+..-++.+.....-.|.+.|..+.  ...||||||++||++..++.....++        +        ....+
T Consensus       182 ~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~--------e--------~~arf  245 (550)
T KOG0605|consen  182 KNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLT--------E--------DWARF  245 (550)
T ss_pred             hhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCc--------h--------HHHHH
Confidence            223333333344443334445566666654  46699999999999999887654333        1        11123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHH------------------------
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLA------------------------  372 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~------------------------  372 (433)
                      .......++..+|..|++||||||+|+|++.+|.+||+|||++.-+....+.....                        
T Consensus       246 YiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (550)
T KOG0605|consen  246 YIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPR  325 (550)
T ss_pred             HHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCcccccccccc
Confidence            44445668999999999999999999999999999999999997665443322200                        


Q ss_pred             ----------H-------HHHHHhcCHHHHH-HHHHhcCCCCCCCChHHHHHHHHHHh-hchhccCCCCCcccccc
Q 013944          373 ----------S-------IVHIVNGDWQSLV-HSLTEMDVVRPGTNTLRVTMDLEDAL-GEVEFKDGIPDVKFSRV  429 (433)
Q Consensus       373 ----------~-------~~~~~~~d~~~~~-~~l~~~g~~~~~~d~~~~~~~l~~~l-~~~~~~~~~~~~~~~~~  429 (433)
                                .       +....-|..+.+| +.+..-| .....|.|+++..+++.| |.++|...-+.-.+.+|
T Consensus       326 ~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI  400 (550)
T KOG0605|consen  326 STMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKI  400 (550)
T ss_pred             chhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence                      0       0011122222333 2333444 355689999988876654 77777655444444333

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.86  E-value=8e-21  Score=173.02  Aligned_cols=185  Identities=17%  Similarity=0.200  Sum_probs=116.2

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      ..+||+|++|+||+|+..+|+.||||+.+++... ...+...+.....+....  ...+...++.++         +..|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~E   69 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLS-FKDRDKYIEGDPRFRSRY--SKSNPRKLVFAW---------AEKE   69 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcce-EeeHHHHhcCCccccccc--ccCCHHHHHHHH---------HHHH
Confidence            3589999999999999778999999999987432 111111111000000000  001111111111         2468


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      ++|+.++..     +++.+|.++..  ...+|||||++|+++..........        ++.       .. ..+..++
T Consensus        70 ~~~l~~l~~-----~~i~~p~~~~~--~~~~lVmE~~~g~~~~~~~l~~~~~--------~~~-------~~-~~i~~~l  126 (190)
T cd05145          70 FRNLKRLYE-----AGVPVPEPILL--KKNVLVMEFIGDDGSPAPRLKDVPL--------EEE-------EA-EELYEQV  126 (190)
T ss_pred             HHHHHHHHh-----CCCCCceEEEe--cCCEEEEEEecCCCchhhhhhhccC--------CHH-------HH-HHHHHHH
Confidence            889888864     34567777753  3469999999998554321111111        111       11 1244567


Q ss_pred             HHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 013944          322 EATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL  389 (433)
Q Consensus       322 ~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l  389 (433)
                      +.++.++|. .|++|+|+||+||+++ +++++|+|||+++.++...-.       +++.+|+..+...+
T Consensus       127 ~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~~~~~-------~~~~~~~~~~~~~~  187 (190)
T cd05145         127 VEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDHPNAL-------EFLRRDIRNINRFF  187 (190)
T ss_pred             HHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecCCCCHH-------HHHHHHHHHHHHHh
Confidence            789999999 9999999999999998 899999999999998765322       34456666665443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.85  E-value=5.8e-21  Score=177.17  Aligned_cols=145  Identities=21%  Similarity=0.258  Sum_probs=103.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ...+|.||||.||..+. .+|.-+|+|++...       ++--|+.+                                 
T Consensus        49 ~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~-------~vVklKQv---------------------------------   88 (355)
T KOG0616|consen   49 LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ-------KVVKLKQV---------------------------------   88 (355)
T ss_pred             eeeeccCccceEEEEEEccCCceeehhhcCHH-------HHHHHHHH---------------------------------
Confidence            46899999999999996 47899999998632       11111100                                 


Q ss_pred             HH-HHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          241 EA-ANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       241 Ea-~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      || .|-.+.....   .+..+-+.+..+  .+..+|||||++||.|..+++..+..+        +        ...++.
T Consensus        89 eH~~nEk~vL~~v---~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~--------e--------~~arFY  149 (355)
T KOG0616|consen   89 EHTHNEKRVLKAV---SHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFS--------E--------PHARFY  149 (355)
T ss_pred             HHHhhHHHHHhhc---cCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCC--------c--------hhHHHH
Confidence            00 0111121111   112222333222  366799999999999999998765544        1        133567


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +.+|..+++|||..++++||+||+|||++.+|.++++|||+++.++..
T Consensus       150 AAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r  197 (355)
T KOG0616|consen  150 AAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR  197 (355)
T ss_pred             HHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence            788999999999999999999999999999999999999999998765

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.85  E-value=1e-20  Score=172.28  Aligned_cols=168  Identities=18%  Similarity=0.198  Sum_probs=106.4

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHh--hcCCHHHHHHHHHHHhHhhhchHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK--RKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~--~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..||+|++|+||+|...+|++||||+++++.......| ..+...    .++..  ...+...++.++.         ..
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~---------~~   68 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGE----FRFRHGYCKSNPRKMVRTWA---------EK   68 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCC----chhhccccCCCHHHHHHHHH---------HH
Confidence            57999999999999977999999999998643221111 000000    00000  0112222222222         46


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |++++.++...     .+..|.++.  ....+|||||++|+.+........+.+        ..       .+ ..+..+
T Consensus        69 E~~~l~~l~~~-----~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~~~~~~--------~~-------~~-~~i~~q  125 (190)
T cd05147          69 EMRNLKRLVTA-----GIPCPEPIL--LKSHVLVMEFIGDDGWAAPRLKDAPLS--------ES-------KA-RELYLQ  125 (190)
T ss_pred             HHHHHHHHHHC-----CCCCCcEEE--ecCCEEEEEEeCCCCCcchhhhcCCCC--------HH-------HH-HHHHHH
Confidence            88898888642     334455543  344599999999976654422111111        11       11 224556


Q ss_pred             HHHHHHHH-HHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHH
Q 013944          321 VEATLVQL-LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF  368 (433)
Q Consensus       321 i~~~l~~l-h~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~  368 (433)
                      +..++.++ |..|++|+||||+||+++ +++++|+|||++.........
T Consensus       126 i~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~~~~~~  173 (190)
T cd05147         126 VIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEHDHPHAL  173 (190)
T ss_pred             HHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccCCCcCHH
Confidence            77899999 699999999999999998 589999999999876554433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.85  E-value=2.6e-21  Score=197.54  Aligned_cols=202  Identities=24%  Similarity=0.360  Sum_probs=146.8

Q ss_pred             ccccCCccccccccceeEEEE-ecCCCEEEEEEcCC----CchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          157 FSFISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRP----NLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       157 f~~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p----~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      +.+.-.+.+|.|+||.||+|+ ..+|+.||||+.++    ...+...+++++|+.       +                 
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkK-------L-----------------   68 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKK-------L-----------------   68 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHH-------c-----------------
Confidence            445667789999999999999 56999999998876    334556666666663       1                 


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                               .++|+++..+.-.....       ...+...+++||||.||+|...+...     ++...+++.+-+    
T Consensus        69 ---------nh~NIVk~f~iee~~~~-------~~~~~~~vlvmEyC~gGsL~~~L~~P-----EN~~GLpE~e~l----  123 (732)
T KOG4250|consen   69 ---------NHPNIVKLFDIEETKFL-------GLVTRLPVLVMEYCSGGSLRKVLNSP-----ENAYGLPESEFL----  123 (732)
T ss_pred             ---------CchhhhhhcccCCcccc-------CcccccceEEEeecCCCcHHHHhcCc-----ccccCCCHHHHH----
Confidence                     36788776543222111       01245669999999999999998642     333334443322    


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc--cCCc--EEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHH
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT--SSGQ--IGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVH  387 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~--~~g~--l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~  387 (433)
                          .+...+..|+++||++||+|||+||+||++-  .+|+  -||+|||.++.+++..   .+.    .+-|.-..++.
T Consensus       124 ----~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---~~~----S~vGT~~YLhP  192 (732)
T KOG4250|consen  124 ----DLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---LFT----SLVGTEEYLHP  192 (732)
T ss_pred             ----HHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---eee----eecCchhhcCh
Confidence                2334467899999999999999999999985  3454  5899999999998865   222    23455678888


Q ss_pred             HHHh-cCCCCCCCChHHHHHHHHHHh-hchhcc
Q 013944          388 SLTE-MDVVRPGTNTLRVTMDLEDAL-GEVEFK  418 (433)
Q Consensus       388 ~l~~-~g~~~~~~d~~~~~~~l~~~l-~~~~~~  418 (433)
                      ++++ .+..+..+|.|+|+..++... |+.+|.
T Consensus       193 el~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~  225 (732)
T KOG4250|consen  193 ELYERQKKYTATVDLWSFGVTLYECATGELPFI  225 (732)
T ss_pred             HHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence            9998 599999999999998887665 777764

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=8.5e-22  Score=196.60  Aligned_cols=193  Identities=21%  Similarity=0.276  Sum_probs=126.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCC--------chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPN--------LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELG  229 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~--------~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~  229 (433)
                      |.-.+.||+|+||.|+.|+. .+|+.||||+....        ..+.+.+                              
T Consensus        19 y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~r------------------------------   68 (370)
T KOG0583|consen   19 YELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKR------------------------------   68 (370)
T ss_pred             eeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHH------------------------------
Confidence            45567899999999999984 68999999986543        1111111                              


Q ss_pred             HHhHhhhchHHHHHHHHHHHHhcCCCCC-eEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhH
Q 013944          230 KGLVGELDYTLEAANASEFQESHSPFPF-IHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLD  308 (433)
Q Consensus       230 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~  308 (433)
                                 |..++.++    ..+++ +.+-.++ ...+..++||||+.||.|.+++.....+.        |     
T Consensus        69 -----------Ei~~~~~~----~~HpnI~~l~ev~-~t~~~~~ivmEy~~gGdL~~~i~~~g~l~--------E-----  119 (370)
T KOG0583|consen   69 -----------EISILRRL----RSHPNIIRLLEVF-ATPTKIYIVMEYCSGGDLFDYIVNKGRLK--------E-----  119 (370)
T ss_pred             -----------HHHHHHHh----ccCCCEeEEEEEE-ecCCeEEEEEEecCCccHHHHHHHcCCCC--------h-----
Confidence                       22222222    22222 2223333 23455899999999999999998743332        1     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC-CcEEEEecccccccC-HHHHHHHHHHHHHHHhcCHHHHH
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRME-RKHQFAMLASIVHIVNGDWQSLV  386 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l~-~~~~~~~~~~~~~~~~~d~~~~~  386 (433)
                         .....+.+|++.++.|+|+.|++|||+||+|++++.+ +.+||+|||++.... +.   .......+.   ..+...
T Consensus       120 ---~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~---~~l~t~cGs---p~Y~aP  190 (370)
T KOG0583|consen  120 ---DEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGED---GLLKTFCGS---PAYAAP  190 (370)
T ss_pred             ---HHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCC---CcccCCCCC---cccCCH
Confidence               1223467889999999999999999999999999999 999999999999874 22   122211111   122233


Q ss_pred             HHHHhcC-CCCCCCChHHHHHHHHHHh-hchhccC
Q 013944          387 HSLTEMD-VVRPGTNTLRVTMDLEDAL-GEVEFKD  419 (433)
Q Consensus       387 ~~l~~~g-~~~~~~d~~~~~~~l~~~l-~~~~~~~  419 (433)
                      +.+..-+ +-....|+|+++-.|+-++ |.+.|.+
T Consensus       191 Evl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d  225 (370)
T KOG0583|consen  191 EVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD  225 (370)
T ss_pred             HHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence            3333445 5556777777777776665 5555553

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=7.4e-22  Score=187.89  Aligned_cols=192  Identities=17%  Similarity=0.217  Sum_probs=131.3

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      ...+|||.|++|.|..|+. .+|+.||||.+..-..     +...+++++++.       +                   
T Consensus        25 ~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~-------~-------------------   78 (359)
T KOG0660|consen   25 VLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRH-------L-------------------   78 (359)
T ss_pred             cccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHH-------h-------------------
Confidence            3468999999999999995 6899999997652221     122223333321       1                   


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                             .|.|+..+.+.+       .|.... --...++|+|+++ .+|...++....++                ...
T Consensus        79 -------~HeNIi~l~di~-------~p~~~~-~f~DvYiV~elMe-tDL~~iik~~~~L~----------------d~H  126 (359)
T KOG0660|consen   79 -------RHENIIGLLDIF-------RPPSRD-KFNDVYLVFELME-TDLHQIIKSQQDLT----------------DDH  126 (359)
T ss_pred             -------cCCCcceEEeec-------cccccc-ccceeEEehhHHh-hHHHHHHHcCcccc----------------HHH
Confidence                   133443333222       221111 1145599999994 78888887543222                233


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g  393 (433)
                      ..++..|+..+|+|+|+.|++|||+||+|++++.+..+|++|||+++..++......   +...+...|+...+.+....
T Consensus       127 ~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~---mTeYVaTRWYRAPElll~~~  203 (359)
T KOG0660|consen  127 AQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGF---MTEYVATRWYRAPELLLNSS  203 (359)
T ss_pred             HHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccc---hhcceeeeeecCHHHHhccc
Confidence            456778899999999999999999999999999999999999999999975422222   22344567899999998888


Q ss_pred             CCCCCCChHHHHHHHHHHh
Q 013944          394 VVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       394 ~~~~~~d~~~~~~~l~~~l  412 (433)
                      -.+..+|+|+++=.+.++|
T Consensus       204 ~Yt~aiDiWSvGCI~AEmL  222 (359)
T KOG0660|consen  204 EYTKAIDIWSVGCILAEML  222 (359)
T ss_pred             cccchhhhhhhhHHHHHHH
Confidence            8899999996554444444

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=3.4e-22  Score=192.57  Aligned_cols=187  Identities=17%  Similarity=0.220  Sum_probs=116.0

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCCchhhHHHHH---HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDI---YILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~~~~~Dl---~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      |+-.+.+|+|.||.|-+|. .++|+.||||+.+...-..-.+..   .-.+.++.+++++                    
T Consensus       174 yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL--------------------  233 (475)
T KOG0615|consen  174 YIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL--------------------  233 (475)
T ss_pred             eEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc--------------------
Confidence            4556789999999999998 469999999997643211000000   0011111111111                    


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                            .|.|++++.+.|.             -....||||||++||.|.+.+..++.+.                +...
T Consensus       234 ------~HP~IV~~~d~f~-------------~~ds~YmVlE~v~GGeLfd~vv~nk~l~----------------ed~~  278 (475)
T KOG0615|consen  234 ------SHPNIVRIKDFFE-------------VPDSSYMVLEYVEGGELFDKVVANKYLR----------------EDLG  278 (475)
T ss_pred             ------CCCCEEEEeeeee-------------cCCceEEEEEEecCccHHHHHHhccccc----------------cchh
Confidence                  2223333222221             2233499999999999999887654432                1122


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccC---CcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHh
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE  391 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~---g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~  391 (433)
                      +.+.+|++.++.|||+.||.|||+||+|||+..+   -.+||.|||+++.....   .+++++++...   +-+.+.+..
T Consensus       279 K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~---sfm~TlCGTps---YvAPEVl~~  352 (475)
T KOG0615|consen  279 KLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG---SFMKTLCGTPS---YVAPEVLAS  352 (475)
T ss_pred             HHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccc---eehhhhcCCcc---ccChhheec
Confidence            4677889999999999999999999999999766   67999999999988643   34444443221   122233333


Q ss_pred             cCC--CCCCCChHHHHH
Q 013944          392 MDV--VRPGTNTLRVTM  406 (433)
Q Consensus       392 ~g~--~~~~~d~~~~~~  406 (433)
                      -|+  .+..+|+|+++-
T Consensus       353 kg~~~~~~kVDiWSlGc  369 (475)
T KOG0615|consen  353 KGVEYYPSKVDIWSLGC  369 (475)
T ss_pred             CCeecccchheeeeccc
Confidence            343  123567775443

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.84  E-value=2.7e-21  Score=191.61  Aligned_cols=193  Identities=23%  Similarity=0.309  Sum_probs=128.6

Q ss_pred             cccccccceeEEEEecCCCE-EEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGSTLDGSI-VAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l~~G~~-VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .+|+|+||+||+|.+ .|+. ||||+..+.-...-.  .+-++.++.++.++                          .|
T Consensus        48 ~iG~G~~g~V~~~~~-~g~~~vavK~~~~~~~~~~~--~~~f~~E~~il~~l--------------------------~H   98 (362)
T KOG0192|consen   48 VLGSGSFGTVYKGKW-RGTDVVAVKIISDPDFDDES--RKAFRREASLLSRL--------------------------RH   98 (362)
T ss_pred             hcccCCceeEEEEEe-CCceeEEEEEecchhcChHH--HHHHHHHHHHHHhC--------------------------CC
Confidence            499999999999998 5666 999998764322110  11122222222111                          22


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVE  322 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~  322 (433)
                      .|+.+|.+.+.+.+            ...+|||||++||+|.+++.....            ..+++...+  -++..|+
T Consensus        99 pNIV~f~G~~~~~~------------~~~~iVtEy~~~GsL~~~l~~~~~------------~~l~~~~~l--~~aldiA  152 (362)
T KOG0192|consen   99 PNIVQFYGACTSPP------------GSLCIVTEYMPGGSLSVLLHKKRK------------RKLPLKVRL--RIALDIA  152 (362)
T ss_pred             CCeeeEEEEEcCCC------------CceEEEEEeCCCCcHHHHHhhccc------------CCCCHHHHH--HHHHHHH
Confidence            23333333322221            135899999999999999976310            111222222  2455678


Q ss_pred             HHHHHHHHCC-ccccCCCCCceEEccCC-cEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHh--cCCCCCC
Q 013944          323 ATLVQLLETG-ILHADPHPGNLRYTSSG-QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE--MDVVRPG  398 (433)
Q Consensus       323 ~~l~~lh~~g-ivH~DlhpgNilv~~~g-~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~--~g~~~~~  398 (433)
                      .++.|||+.+ ++|+||||.|+|++.++ .+||+|||+++......      .......+.+..++..+++  -......
T Consensus       153 rGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~------~~~~~~~GT~~wMAPEv~~~~~~~~~~K  226 (362)
T KOG0192|consen  153 RGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK------TSMTSVAGTYRWMAPEVLRGEKSPYTEK  226 (362)
T ss_pred             HHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc------ccccCCCCCccccChhhhcCCCCcCCcc
Confidence            8999999999 99999999999999998 99999999998776532      0011145667788888887  5577889


Q ss_pred             CChHHHHHHHHHHh-hchhc
Q 013944          399 TNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       399 ~d~~~~~~~l~~~l-~~~~~  417 (433)
                      .|+.+|+.-+-+++ ++.+|
T Consensus       227 ~DvySFgIvlWEl~t~~~Pf  246 (362)
T KOG0192|consen  227 SDVYSFGIVLWELLTGEIPF  246 (362)
T ss_pred             chhhhHHHHHHHHHHCCCCC
Confidence            99999998888877 33444

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.84  E-value=3.9e-21  Score=183.21  Aligned_cols=192  Identities=22%  Similarity=0.271  Sum_probs=121.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCC-----chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPN-----LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~-----~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      -+.+|+|+||.||+|+. .+|+.||+|.++-.     +.....+++.+++.                             
T Consensus        16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~-----------------------------   66 (323)
T KOG0594|consen   16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKR-----------------------------   66 (323)
T ss_pred             HHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHH-----------------------------
Confidence            34599999999999994 68999999987643     33344455544442                             


Q ss_pred             hchHHHHHH-HHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          236 LDYTLEAAN-ASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       236 ld~~~Ea~n-~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                          ..++| ++++.+.+.....       ....+..+||+||++ .+|.+++......+          ++.+.  ..+
T Consensus        67 ----L~~~~~iv~L~dv~~~~~~-------~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~----------~g~~~--~~i  122 (323)
T KOG0594|consen   67 ----LSHANHIVRLHDVIHTSNN-------HRGIGKLYLVFEFLD-RDLKKYMDSLPKKP----------QGLPP--RLI  122 (323)
T ss_pred             ----hCCCcceEEEEeeeeeccc-------ccccceEEEEEEeec-ccHHHHHHhccccc----------cCCCH--HHH
Confidence                12222 3333222221111       011136689999998 68888887543211          11111  344


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      ..+..|+..++.+||++||+|||+||.||+++++|.+||+|||+++.+.-..+. +..-    +-.=|+...+.|..--.
T Consensus       123 k~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~-yt~e----vvTlWYRaPEvLlGs~~  197 (323)
T KOG0594|consen  123 KSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT-YTPE----VVTLWYRAPEVLLGSTS  197 (323)
T ss_pred             HHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc-cccc----EEEeeccCHHHhcCCCc
Confidence            567888999999999999999999999999999999999999999966522221 1110    11113455555655545


Q ss_pred             CCCCCChHHHHHHHHHH
Q 013944          395 VRPGTNTLRVTMDLEDA  411 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~  411 (433)
                      +...+|+|+++-.+.++
T Consensus       198 Ys~~vDiWs~GcIfaEm  214 (323)
T KOG0594|consen  198 YSTSVDIWSLGCIFAEM  214 (323)
T ss_pred             CCCCcchHhHHHHHHHH
Confidence            67777777555444333

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.84  E-value=1.5e-20  Score=179.66  Aligned_cols=193  Identities=20%  Similarity=0.189  Sum_probs=122.4

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+||||+|+.++. .+|+.+|+|+++...-         ++                                 ..
T Consensus        30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~i---------v~---------------------------------~~   67 (357)
T KOG0598|consen   30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKI---------VE---------------------------------KK   67 (357)
T ss_pred             eeeeeccCCceEEEEEEcccCceeehhhhhhhHh---------hh---------------------------------hh
Confidence            56899999999999995 5899999999864210         00                                 11


Q ss_pred             HHHHHHHHHHhcCCC-CCeEeceeecccC-CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPF-PFIHVPKVFRYLS-RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~-~~v~vP~v~~~~~-~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |.+++..-+..+... ..+.|.-.|.-.+ ++.+||+||+.||.|.-.+......+                +....+..
T Consensus        68 e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~----------------E~~arfYl  131 (357)
T KOG0598|consen   68 EVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFS----------------EDRARFYL  131 (357)
T ss_pred             hHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcc----------------hhHHHHHH
Confidence            222222222222221 2233444443333 56799999999999998887544332                11234555


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH-HH-HHHHHH-----------HHHHHhcCHHHH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK-HQ-FAMLAS-----------IVHIVNGDWQSL  385 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~-~~-~~~~~~-----------~~~~~~~d~~~~  385 (433)
                      ..+..+|.|||+.||+|||+||+|||++.+|.++|+|||+++..-.. .. ..++.+           -.+--.-|||++
T Consensus       132 aEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsL  211 (357)
T KOG0598|consen  132 AEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSL  211 (357)
T ss_pred             HHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhH
Confidence            56788999999999999999999999999999999999999854322 11 111111           111234477777


Q ss_pred             HHHHHhcCCCCCCCChHHHHHHHHHHh
Q 013944          386 VHSLTEMDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       386 ~~~l~~~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      +..+++|-...++...+......+.++
T Consensus       212 GillYeML~G~pPF~~~~~~~~~~~I~  238 (357)
T KOG0598|consen  212 GILLYEMLTGKPPFYAEDVKKMYDKIL  238 (357)
T ss_pred             HHHHHHHhhCCCCCcCccHHHHHHHHh
Confidence            777777766555544444343344443

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.83  E-value=3.8e-21  Score=180.94  Aligned_cols=184  Identities=20%  Similarity=0.215  Sum_probs=122.8

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchh-----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      ...+.|++|+||.||||+. ++++.||+|..+.+-+.     ...+++.+|.                            
T Consensus        79 e~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl----------------------------  130 (419)
T KOG0663|consen   79 EKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILL----------------------------  130 (419)
T ss_pred             HHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHH----------------------------
Confidence            3456899999999999995 68999999998875422     1222222222                            


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                                       .+.+.+-|.|-+|+-.. -...+||||||+ .+|..++..-+       ..+.+.        
T Consensus       131 -----------------~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E-hDLksl~d~m~-------q~F~~~--------  177 (419)
T KOG0663|consen  131 -----------------KARHPNIVEVKEVVVGSNMDKIYIVMEYVE-HDLKSLMETMK-------QPFLPG--------  177 (419)
T ss_pred             -----------------hcCCCCeeeeEEEEeccccceeeeeHHHHH-hhHHHHHHhcc-------CCCchH--------
Confidence                             11122223444444322 255799999998 56777665322       111111        


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhc
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~  392 (433)
                      -.+++..|+..+++|||...|+||||||+|+|++.+|.++++|||+++.+..... .+.    .++-.=|+...+.|...
T Consensus       178 evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k-~~T----~lVVTLWYRaPELLLG~  252 (419)
T KOG0663|consen  178 EVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK-PYT----PLVVTLWYRAPELLLGA  252 (419)
T ss_pred             HHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcc-cCc----ceEEEeeecCHHHhcCC
Confidence            1246777889999999999999999999999999999999999999999875421 111    12223366677777776


Q ss_pred             CCCCCCCChHHHHHHHH
Q 013944          393 DVVRPGTNTLRVTMDLE  409 (433)
Q Consensus       393 g~~~~~~d~~~~~~~l~  409 (433)
                      -.....+|+|+++=.+.
T Consensus       253 ~tyst~iDMWSvGCI~a  269 (419)
T KOG0663|consen  253 KTYSTAVDMWSVGCIFA  269 (419)
T ss_pred             cccCcchhhhhHHHHHH
Confidence            67777778885443333

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=2.5e-21  Score=178.39  Aligned_cols=185  Identities=22%  Similarity=0.248  Sum_probs=129.4

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      |...+.||.||||.||++. +.+|..||.|-+.-+.-     +.+..++.+|+                           
T Consensus        21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLk---------------------------   73 (375)
T KOG0591|consen   21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLK---------------------------   73 (375)
T ss_pred             HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHH---------------------------
Confidence            3446689999999999999 67999999996554332     22233333333                           


Q ss_pred             HhhhchHHHHHHHHHHHH-hcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          233 VGELDYTLEAANASEFQE-SHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~-~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                            ...|.|++++.. .|...+.+            ..||||+|++|+|+.+++.-+.           ..+.-..+
T Consensus        74 ------QL~HpNIVqYy~~~f~~~~ev------------lnivmE~c~~GDLsqmIk~~K~-----------qkr~ipE~  124 (375)
T KOG0591|consen   74 ------QLNHPNIVQYYAHSFIEDNEV------------LNIVMELCDAGDLSQMIKHFKK-----------QKRLIPEK  124 (375)
T ss_pred             ------hcCCchHHHHHHHhhhccchh------------hHHHHHhhcccCHHHHHHHHHh-----------ccccCchH
Confidence                  235668888776 34333221            2799999999999999875321           11111122


Q ss_pred             HHHHHHHHHHHHHHHHHHH--CC--ccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHH-----------
Q 013944          312 RLLDLVNKGVEATLVQLLE--TG--ILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVH-----------  376 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~--~g--ivH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~-----------  376 (433)
                      .++. +..+++.+|..+|.  .+  ++|||+||+||+++.+|.+||.|||+++.++.+..  +..++++           
T Consensus       125 ~Vwk-~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t--fA~S~VGTPyYMSPE~i~  201 (375)
T KOG0591|consen  125 TVWK-YFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT--FAHSLVGTPYYMSPERIH  201 (375)
T ss_pred             HHHH-HHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH--HHHhhcCCCcccCHHHHh
Confidence            3343 33467889999998  55  99999999999999999999999999999987654  2222222           


Q ss_pred             ----HHhcCHHHHHHHHHhcCCCCCCCChH
Q 013944          377 ----IVNGDWQSLVHSLTEMDVVRPGTNTL  402 (433)
Q Consensus       377 ----~~~~d~~~~~~~l~~~g~~~~~~d~~  402 (433)
                          ....|.|+++..+++|..+.++.--+
T Consensus       202 ~~~Y~~kSDiWslGCllyEMcaL~~PF~g~  231 (375)
T KOG0591|consen  202 ESGYNFKSDIWSLGCLLYEMCALQSPFYGD  231 (375)
T ss_pred             cCCCCcchhHHHHHHHHHHHHhcCCCcccc
Confidence                34678999999999998887765444

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=2.4e-20  Score=186.43  Aligned_cols=189  Identities=19%  Similarity=0.279  Sum_probs=142.6

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcC---CCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQR---PNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~---p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      |-..+.||+|+-|.||.|+ ..+++.||||...   ..-++.+..++.+|+                             
T Consensus       275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~-----------------------------  325 (550)
T KOG0578|consen  275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMR-----------------------------  325 (550)
T ss_pred             hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHH-----------------------------
Confidence            4456689999999999998 5689999999753   233455666666666                             


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                          ..+|.|++.|.+.+--             ..+.|.||||++|++|+|++....         +.|.        -+
T Consensus       326 ----~~~H~NiVnfl~Sylv-------------~deLWVVMEym~ggsLTDvVt~~~---------~~E~--------qI  371 (550)
T KOG0578|consen  326 ----DLHHPNIVNFLDSYLV-------------GDELWVVMEYMEGGSLTDVVTKTR---------MTEG--------QI  371 (550)
T ss_pred             ----hccchHHHHHHHHhcc-------------cceeEEEEeecCCCchhhhhhccc---------ccHH--------HH
Confidence                4478899999886632             245599999999999999986431         1121        12


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      ..+.+.++.||.+||..||+|||+|..|||++.+|++||+|||++.++++++..      ...+-+..++|+...+..-.
T Consensus       372 A~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K------R~TmVGTPYWMAPEVvtrk~  445 (550)
T KOG0578|consen  372 AAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK------RSTMVGTPYWMAPEVVTRKP  445 (550)
T ss_pred             HHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCc------cccccCCCCccchhhhhhcc
Confidence            346777889999999999999999999999999999999999999999876521      12334567777777777766


Q ss_pred             CCCCCChHHHHHHHHHHh-hchh
Q 013944          395 VRPGTNTLRVTMDLEDAL-GEVE  416 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l-~~~~  416 (433)
                      ..+.+|+|.++...-+++ |+..
T Consensus       446 YG~KVDIWSLGIMaIEMveGEPP  468 (550)
T KOG0578|consen  446 YGPKVDIWSLGIMAIEMVEGEPP  468 (550)
T ss_pred             cCccccchhhhhHHHHHhcCCCC
Confidence            778899998886544444 6653

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.83  E-value=2.1e-20  Score=186.05  Aligned_cols=199  Identities=22%  Similarity=0.271  Sum_probs=146.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |.-.+.||.||||.||||+. .+++.||+|.....-  .-..|++.++.+.+++..+                       
T Consensus         4 yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g--r~~k~l~~l~~ev~i~r~l-----------------------   58 (808)
T KOG0597|consen    4 YHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG--RNEKELKNLRQEVRILRSL-----------------------   58 (808)
T ss_pred             hhHHHHhcCCccceeeecccccceeEEEEEEehhcC--CchHHHHHHHHHHHHHHhc-----------------------
Confidence            44456899999999999995 488999999865422  2245677777666666555                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .|.|+..|.+.|+...++             ++|+||+.| +|..++.....++        |.+.        .-+
T Consensus        59 ---kHpniv~m~esfEt~~~~-------------~vVte~a~g-~L~~il~~d~~lp--------Ee~v--------~~~  105 (808)
T KOG0597|consen   59 ---KHPNIVEMLESFETSAHL-------------WVVTEYAVG-DLFTILEQDGKLP--------EEQV--------RAI  105 (808)
T ss_pred             ---CCcchhhHHHhhcccceE-------------EEEehhhhh-hHHHHHHhccCCC--------HHHH--------HHH
Confidence               566999999888766555             999999998 9999887654433        3222        224


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH-------------HHHHHHHHHHHhcCHHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ-------------FAMLASIVHIVNGDWQS  384 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~-------------~~~~~~~~~~~~~d~~~  384 (433)
                      ...+..+|.|||+.+|+|||+||.||++...|.+|++|||+++.++....             ..+.+--.+-...|.|+
T Consensus       106 a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWs  185 (808)
T KOG0597|consen  106 AYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWS  185 (808)
T ss_pred             HHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHH
Confidence            55667899999999999999999999999999999999999998765321             22222222244568888


Q ss_pred             HHHHHHhcCCCCCCCChHHHHHHHHHHhhch
Q 013944          385 LVHSLTEMDVVRPGTNTLRVTMDLEDALGEV  415 (433)
Q Consensus       385 ~~~~l~~~g~~~~~~d~~~~~~~l~~~l~~~  415 (433)
                      ++..+|++-...|..=...+..-...++.+.
T Consensus       186 lGcilYE~~~G~PPF~a~si~~Lv~~I~~d~  216 (808)
T KOG0597|consen  186 LGCILYELYVGQPPFYARSITQLVKSILKDP  216 (808)
T ss_pred             HHHHHHHHhcCCCCchHHHHHHHHHHHhcCC
Confidence            8888888888777776666666666555544

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2e-20  Score=186.33  Aligned_cols=186  Identities=23%  Similarity=0.284  Sum_probs=134.2

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchh---hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRH---VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~---~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.||.|+||.||+|.+.+|+.||||...+....   .+..++.++.                                
T Consensus        79 ~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls--------------------------------  126 (361)
T KOG1187|consen   79 ESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILS--------------------------------  126 (361)
T ss_pred             hhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHh--------------------------------
Confidence            34689999999999999999999999987765432   2333333333                                


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCC-ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSR-KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                       ...|+|+.++.+.|.+.             + .++||+||++.|+|.+.+......            .++|..++.  
T Consensus       127 -~l~H~Nlv~LlGyC~e~-------------~~~~~LVYEym~nGsL~d~L~~~~~~------------~L~W~~R~k--  178 (361)
T KOG1187|consen  127 -RLRHPNLVKLLGYCLEG-------------GEHRLLVYEYMPNGSLEDHLHGKKGE------------PLDWETRLK--  178 (361)
T ss_pred             -cCCCcCcccEEEEEecC-------------CceEEEEEEccCCCCHHHHhCCCCCC------------CCCHHHHHH--
Confidence             11344555554443222             3 379999999999999998754321            234555543  


Q ss_pred             HHHHHHHHHHHHHHCC---ccccCCCCCceEEccCCcEEEEecccccccCH-HHHHHHHHHHHHHHhcCHHHHHHHHHhc
Q 013944          317 VNKGVEATLVQLLETG---ILHADPHPGNLRYTSSGQIGFLDFGLLCRMER-KHQFAMLASIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~g---ivH~DlhpgNilv~~~g~l~l~DFGl~~~l~~-~~~~~~~~~~~~~~~~d~~~~~~~l~~~  392 (433)
                      ++.+++.+|.|||...   ++|||+||.|||++.+.+.|++|||+++..+. ....  ...   . .+....++......
T Consensus       179 Ia~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~--~~~---~-~gt~gY~~PEy~~~  252 (361)
T KOG1187|consen  179 IALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSV--STT---V-MGTFGYLAPEYAST  252 (361)
T ss_pred             HHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccce--eee---c-CCCCccCChhhhcc
Confidence            6778899999999854   99999999999999999999999999966654 2211  000   0 45666777888888


Q ss_pred             CCCCCCCChHHHHHHHHHHh
Q 013944          393 DVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       393 g~~~~~~d~~~~~~~l~~~l  412 (433)
                      |.++.+.|+.+|+.-+-+++
T Consensus       253 g~lt~KsDVySFGVvllEli  272 (361)
T KOG1187|consen  253 GKLTEKSDVYSFGVVLLELI  272 (361)
T ss_pred             CCcCcccccccchHHHHHHH
Confidence            98999999998888775555

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.82  E-value=8.9e-22  Score=187.68  Aligned_cols=150  Identities=24%  Similarity=0.251  Sum_probs=105.6

Q ss_pred             cccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          158 SFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       158 ~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      .+...+.+|+||||.||+|.+ .++++||||..-++-+-. .+|+.+|+                               
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-nrEl~im~-------------------------------   72 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-NRELQIMR-------------------------------   72 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-cHHHHHHH-------------------------------
Confidence            345667899999999999996 578999999766654422 45666666                               


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhc----cCCCCCCCCchhhhhhhHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLS----TGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                        ...|.|++++.-.|.....-  -++      -..|||||++ .+|.++++.-    ...+                ..
T Consensus        73 --~l~HpNIV~L~~~f~~~~~~--d~~------~lnlVleymP-~tL~~~~r~~~~~~~~mp----------------~~  125 (364)
T KOG0658|consen   73 --KLDHPNIVRLLYFFSSSTES--DEV------YLNLVLEYMP-ETLYRVIRHYTRANQRMP----------------LL  125 (364)
T ss_pred             --hcCCcCeeeEEEEEEecCCC--chh------HHHHHHHhch-HHHHHHHHHHhhcCCCCc----------------ee
Confidence              22455665544332211100  011      1268999998 6788777631    1111                01


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC-CcEEEEecccccccCHHH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l~~~~  366 (433)
                      -++++..|+..++.|||..||+|||+||.|+|++++ |.+||+|||.++.+.+..
T Consensus       126 ~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e  180 (364)
T KOG0658|consen  126 EIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE  180 (364)
T ss_pred             eeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence            125678889999999999999999999999999987 999999999999986543

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.82  E-value=3.5e-20  Score=186.21  Aligned_cols=192  Identities=19%  Similarity=0.268  Sum_probs=132.2

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..++||+||||.||||++..  +||||++.-.-...  .-++.++.++..+++                          .
T Consensus       396 l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~--~qlqaFKnEVa~lkk--------------------------T  445 (678)
T KOG0193|consen  396 LGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTP--EQLQAFKNEVAVLKK--------------------------T  445 (678)
T ss_pred             ccceeccccccceeeccccc--ceEEEEEecCCCCH--HHHHHHHHHHHHHhh--------------------------c
Confidence            45689999999999999843  69999876432211  123334433333322                          2


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .|.|+.-|.+.+.+.+.              .+|+.||+|.+|..+++..             +.+.+..+.+  .++++
T Consensus       446 RH~NIlLFMG~~~~p~~--------------AIiTqwCeGsSLY~hlHv~-------------etkfdm~~~i--dIAqQ  496 (678)
T KOG0193|consen  446 RHENILLFMGACMNPPL--------------AIITQWCEGSSLYTHLHVQ-------------ETKFDMNTTI--DIAQQ  496 (678)
T ss_pred             chhhheeeehhhcCCce--------------eeeehhccCchhhhhccch-------------hhhhhHHHHH--HHHHH
Confidence            45578778777654432              6899999999999998743             2344444332  37889


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC---HHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC---
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME---RKHQFAMLASIVHIVNGDWQSLVHSLTEMDV---  394 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~---~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~---  394 (433)
                      ++.++.|||.++|+|+|||..||++.++++|+|.|||+++.-.   .+++..       ...+-.-.|+..++.|+-   
T Consensus       497 iaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~-------qp~gsilwmAPEvIRmqd~nP  569 (678)
T KOG0193|consen  497 IAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLE-------QPHGSLLWMAPEVIRMQDDNP  569 (678)
T ss_pred             HHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccC-------CCccchhhhcHHHHhhcccCC
Confidence            9999999999999999999999999999999999999986432   121110       011112245555555543   


Q ss_pred             CCCCCChHHHHHHHHHHh-hchhcc
Q 013944          395 VRPGTNTLRVTMDLEDAL-GEVEFK  418 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l-~~~~~~  418 (433)
                      ..+..|+++|+.-+++++ +++.+.
T Consensus       570 fS~qSDVYaFGiV~YELltg~lPys  594 (678)
T KOG0193|consen  570 FSFQSDVYAFGIVWYELLTGELPYS  594 (678)
T ss_pred             CCcccchhhhhHHHHHHHhCcCCcC
Confidence            456789999999999998 455444

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.81  E-value=2.7e-20  Score=182.17  Aligned_cols=212  Identities=17%  Similarity=0.153  Sum_probs=124.5

Q ss_pred             cccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          158 SFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       158 ~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      .|.....||+|+||.|-+|+. .+|+.||||++...-...   -.       .+...-......+..+            
T Consensus        98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~---~~-------~~~~~~a~~~~~~ekv------------  155 (576)
T KOG0585|consen   98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRR---QY-------GFPRQPAMKLMPIEKV------------  155 (576)
T ss_pred             heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhh---hc-------ccccccccccCcHHHH------------
Confidence            345567899999999999994 689999999975321100   00       0000000000111111            


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                        +.|-.-+.+    +.+.+-|..-+|+.+ .++..|||+|||..|.+...-...       . .+.+.        ...
T Consensus       156 --~~EIailKk----l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~-------~-els~~--------~Ar  213 (576)
T KOG0585|consen  156 --RREIAILKK----LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDK-------P-ELSEQ--------QAR  213 (576)
T ss_pred             --HHHHHHHHh----cCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCc-------c-cccHH--------HHH
Confidence              112222222    222223334444443 357789999999998876432110       0 01111        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH----HHHHHHHHHHHHHhcCHHHHHHHHHh
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK----HQFAMLASIVHIVNGDWQSLVHSLTE  391 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~----~~~~~~~~~~~~~~~d~~~~~~~l~~  391 (433)
                      .+.+.+..+|.|||.+||+|||+||.|+|++.+|++||.|||.+-.....    .-..+..     ..+...-++..+..
T Consensus       214 ~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~-----tvGTPAF~APE~c~  288 (576)
T KOG0585|consen  214 KYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSR-----TVGTPAFFAPELCS  288 (576)
T ss_pred             HHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhh-----cCCCccccchHhhc
Confidence            35566778999999999999999999999999999999999998866221    1111111     22333444454444


Q ss_pred             cC----CCCCCCChHHHHHHHHHHh-hchhcc
Q 013944          392 MD----VVRPGTNTLRVTMDLEDAL-GEVEFK  418 (433)
Q Consensus       392 ~g----~~~~~~d~~~~~~~l~~~l-~~~~~~  418 (433)
                      .|    +.....|+|+++-.|+++| |++.|.
T Consensus       289 ~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~  320 (576)
T KOG0585|consen  289 GGNSFSYSGFALDIWALGVTLYCLLFGQLPFF  320 (576)
T ss_pred             CCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence            32    2344678888888888876 776654

>smart00090 RIO RIO-like kinase

Probab=99.81  E-value=4.6e-19  Score=166.82  Aligned_cols=191  Identities=18%  Similarity=0.173  Sum_probs=127.2

Q ss_pred             CccccccccceeEEEE--ecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          162 EEPVAAASFGQVYRGS--TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~--l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .++||+|++|+||+|+  ..+|+.||||+.+++.......+.  +..   ....+.-...+....         .+..+.
T Consensus        33 ~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~---------~~~~~~   98 (237)
T smart00090       33 GGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--YVD---GDFRFKYRKINPRKL---------VRLWAE   98 (237)
T ss_pred             CCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--hcc---cchhhccCCCCHHHH---------HHHHHH
Confidence            4689999999999998  579999999999875432110000  000   000000000011110         011246


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .|++++.++...     .+.+|+++..  +..+|||||++|.++..........        ..       ... ..+..
T Consensus        99 ~E~~~L~~L~~~-----~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~~~~~--------~~-------~~~-~~i~~  155 (237)
T smart00090       99 KEFRNLQRLYEA-----GVPVPKPIAW--RRNVLVMEFIGGDGLPAPRLKDVEP--------EE-------EEE-FELYD  155 (237)
T ss_pred             HHHHHHHHHHhc-----CCCCCeeeEe--cCceEEEEEecCCcccccccccCCc--------ch-------HHH-HHHHH
Confidence            788898888642     4667887753  3569999999998876653211110        00       011 12456


Q ss_pred             HHHHHHHHHHHCC-ccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCC
Q 013944          320 GVEATLVQLLETG-ILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       320 ~i~~~l~~lh~~g-ivH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~  397 (433)
                      ++..++.++|..| ++|+|+||+||+++ +++++++|||.+.........       ++..+|+..+...+.+.|....
T Consensus       156 qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~  226 (237)
T smart00090      156 DILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELDHPMAL-------EFLERDIRNIIRFFRRKGVDEL  226 (237)
T ss_pred             HHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccCCcchH-------HHHHHHHHHHHHHHHHcCCCcC
Confidence            7888999999999 99999999999998 899999999999987765533       4578899999999999988543

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.81  E-value=8.2e-20  Score=175.52  Aligned_cols=182  Identities=21%  Similarity=0.231  Sum_probs=127.4

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.+|+|.||.|-+|+. +.|+.||||.++.+.-+. ..|+--+|+++.++..+                          
T Consensus        58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-eqDlvhIRREIeIMSsL--------------------------  110 (668)
T KOG0611|consen   58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-EQDLVHIRREIEIMSSL--------------------------  110 (668)
T ss_pred             HHHhcCCcccceeehhhccCCcEeehhhhhhhhccc-HHHHHHHHHHHHHHhhc--------------------------
Confidence            45799999999999994 799999999887543211 33444455444444433                          


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .+.|+..+++.|.+.             .+.+|||||..||.|.|++...+.++        +++        ..-+.++
T Consensus       111 NHPhII~IyEVFENk-------------dKIvivMEYaS~GeLYDYiSer~~Ls--------ErE--------aRhfFRQ  161 (668)
T KOG0611|consen  111 NHPHIIQIYEVFENK-------------DKIVIVMEYASGGELYDYISERGSLS--------ERE--------ARHFFRQ  161 (668)
T ss_pred             CCCceeehhhhhcCC-------------ceEEEEEEecCCccHHHHHHHhcccc--------HHH--------HHHHHHH
Confidence            333555555555443             44599999999999999998765443        222        1236678


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHH--------HHhc--------CHHH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVH--------IVNG--------DWQS  384 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~--------~~~~--------d~~~  384 (433)
                      |..++.|+|.++++|||||-.|||++.++.++|.|||++..+.++   .++.++++        ++|+        |.|+
T Consensus       162 IvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~---kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWs  238 (668)
T KOG0611|consen  162 IVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK---KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWS  238 (668)
T ss_pred             HHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc---cHHHHhcCCcccCCccccCCCCCCCCccchhh
Confidence            889999999999999999999999999999999999999887664   34444443        2332        5566


Q ss_pred             HHHHHHhcCCCCCCCChH
Q 013944          385 LVHSLTEMDVVRPGTNTL  402 (433)
Q Consensus       385 ~~~~l~~~g~~~~~~d~~  402 (433)
                      ++-.|+.+-+.+-..|-.
T Consensus       239 LGvLLYtLVyGtMPFDG~  256 (668)
T KOG0611|consen  239 LGVLLYTLVYGTMPFDGR  256 (668)
T ss_pred             HHHHHHHHhhcccccCCc
Confidence            666666654444334433

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.81  E-value=4.9e-20  Score=183.42  Aligned_cols=181  Identities=20%  Similarity=0.230  Sum_probs=145.0

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+-+|+|+-|-|++|++ .++.||||..+    +.-..||+-||.                                 ..
T Consensus       129 LeWlGSGaQGAVF~Grl-~netVAVKKV~----elkETdIKHLRk---------------------------------Lk  170 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRL-HNETVAVKKVR----ELKETDIKHLRK---------------------------------LK  170 (904)
T ss_pred             hhhhccCcccceeeeec-cCceehhHHHh----hhhhhhHHHHHh---------------------------------cc
Confidence            45799999999999998 67899999654    455678888873                                 36


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      |.||+.|.+.|...+-+             +|+||||..|.|..+++..+...                ..++---.++|
T Consensus       171 H~NII~FkGVCtqsPcy-------------CIiMEfCa~GqL~~VLka~~~it----------------p~llv~Wsk~I  221 (904)
T KOG4721|consen  171 HPNIITFKGVCTQSPCY-------------CIIMEFCAQGQLYEVLKAGRPIT----------------PSLLVDWSKGI  221 (904)
T ss_pred             CcceeeEeeeecCCcee-------------EEeeeccccccHHHHHhccCccC----------------HHHHHHHHHHh
Confidence            77999999888776654             89999999999999997654322                11222245678


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCCCCCh
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNT  401 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~~d~  401 (433)
                      +.+++|||.+.|+|||||.-||||+.+..|||+|||.++.+.+..  ..+     ...+.+..|+..++.---..+++|+
T Consensus       222 A~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S--TkM-----SFaGTVaWMAPEvIrnePcsEKVDI  294 (904)
T KOG4721|consen  222 AGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS--TKM-----SFAGTVAWMAPEVIRNEPCSEKVDI  294 (904)
T ss_pred             hhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhh--hhh-----hhhhhHhhhCHHHhhcCCcccccce
Confidence            899999999999999999999999999999999999998887641  111     2345677899999998899999999


Q ss_pred             HHHHHHHHHHh-hchh
Q 013944          402 LRVTMDLEDAL-GEVE  416 (433)
Q Consensus       402 ~~~~~~l~~~l-~~~~  416 (433)
                      |.|..-|-++| ++..
T Consensus       295 wSfGVVLWEmLT~EiP  310 (904)
T KOG4721|consen  295 WSFGVVLWEMLTGEIP  310 (904)
T ss_pred             ehhHHHHHHHHhcCCC
Confidence            99999887777 5543

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=3.1e-19  Score=173.02  Aligned_cols=148  Identities=17%  Similarity=0.155  Sum_probs=100.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+......... .....+..+..++..+                         
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~~E~~~l~~l-------------------------   58 (291)
T cd05612           5 RIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRL-KQEQHVHNEKRVLKEV-------------------------   58 (291)
T ss_pred             eeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhh-HHHHHHHHHHHHHHhC-------------------------
Confidence            356899999999999996 4799999998753211000 0111111111111111                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       .+.|+.++.+.+.+.             ...++||||++|++|.+++......+        +..        ...+..
T Consensus        59 -~hp~iv~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~~--------~~~~~~  108 (291)
T cd05612          59 -SHPFIIRLFWTEHDQ-------------RFLYMLMEYVPGGELFSYLRNSGRFS--------NST--------GLFYAS  108 (291)
T ss_pred             -CCCcHhhhHhhhccC-------------CeEEEEEeCCCCCCHHHHHHHcCCCC--------HHH--------HHHHHH
Confidence             234555555444333             23489999999999999886543222        111        123456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..++.+||+.|++|+|++|.||+++.+|.++|+|||++..+..
T Consensus       109 qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612         109 EIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             HHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            788899999999999999999999999999999999999886643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.80  E-value=6e-20  Score=183.84  Aligned_cols=144  Identities=20%  Similarity=0.254  Sum_probs=97.6

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+...... .....                            .+      ..
T Consensus         6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~----------------------------~~------~~   50 (363)
T cd05628           6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE-KEQVG----------------------------HI------RA   50 (363)
T ss_pred             eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH-hhHHH----------------------------HH------HH
Confidence            46899999999999985 579999999986321000 00000                            00      11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +   .+..+++.+..+  ....+|||||++|++|.+++......+        +.        ....+.
T Consensus        51 E~~il~~----~---~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~--------~~--------~~~~~~  107 (363)
T cd05628          51 ERDILVE----A---DSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLT--------EE--------ETQFYI  107 (363)
T ss_pred             HHHHHHh----C---CCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCC--------HH--------HHHHHH
Confidence            2211111    1   122344444333  245699999999999999886543322        11        112355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.+||+.|++|||+||.||+++.+|.++|+|||+++.+.
T Consensus       108 ~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~  152 (363)
T cd05628         108 AETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK  152 (363)
T ss_pred             HHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence            667889999999999999999999999999999999999988654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.80  E-value=1.8e-19  Score=183.23  Aligned_cols=181  Identities=20%  Similarity=0.324  Sum_probs=120.4

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCCchh--hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRH--VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~--~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      |...+.||+|+||||-+|. .++|+.||||+++....-  +...++.+|.                              
T Consensus       188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~------------------------------  237 (586)
T KOG0667|consen  188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILE------------------------------  237 (586)
T ss_pred             EEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHH------------------------------
Confidence            3446789999999999999 468999999999865432  2222222222                              


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                                 .+.+ .......++...+..  +-...|||.|.++ .+|.++++..+-..            +.  -.+
T Consensus       238 -----------~ln~-~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~G------------ls--l~~  290 (586)
T KOG0667|consen  238 -----------LLNK-HDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFRG------------LS--LPL  290 (586)
T ss_pred             -----------HHhc-cCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCCC------------CC--HHH
Confidence                       1111 112223344444443  3356699999885 79999998654211            11  123


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC--CcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHh
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS--GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE  391 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~--g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~  391 (433)
                      .+-+.+++..+|..||+.|||||||||+|||+..-  .+||++|||.+....+..- .       -++..++...+.++.
T Consensus       291 ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy-t-------YiQSRfYRAPEVILG  362 (586)
T KOG0667|consen  291 VRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY-T-------YIQSRFYRAPEVILG  362 (586)
T ss_pred             HHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce-e-------eeeccccccchhhcc
Confidence            34577889999999999999999999999999643  4799999999988776421 1       223456666666666


Q ss_pred             cCCCCCCCChHHHH
Q 013944          392 MDVVRPGTNTLRVT  405 (433)
Q Consensus       392 ~g~~~~~~d~~~~~  405 (433)
                      +.+ ...+|+|+|+
T Consensus       363 lpY-~~~IDmWSLG  375 (586)
T KOG0667|consen  363 LPY-DTAIDMWSLG  375 (586)
T ss_pred             CCC-CCccceeehh
Confidence            665 4567777443

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.79  E-value=1e-19  Score=179.77  Aligned_cols=147  Identities=17%  Similarity=0.218  Sum_probs=99.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|.||+|+. .+|+.||||+.+.....    +.....                               ++
T Consensus        21 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~-------------------------------~~   65 (329)
T PTZ00263         21 EMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KMKQVQ-------------------------------HV   65 (329)
T ss_pred             EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhhHH-------------------------------HH
Confidence            3457899999999999996 47899999987632100    000000                               01


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.+    +. ++  .+++++..  .....+++|||++|++|.+.+......+        +        .....
T Consensus        66 ~~E~~~l~~----l~-hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~--------~~~~~  122 (329)
T PTZ00263         66 AQEKSILME----LS-HP--FIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFP--------N--------DVAKF  122 (329)
T ss_pred             HHHHHHHHh----CC-CC--CCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCC--------H--------HHHHH
Confidence            122222222    11 11  23333322  2356799999999999998886543221        1        11223


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..+|.+||+.|++|+|+||.||+++.+|.++|+|||++..+..
T Consensus       123 ~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263        123 YHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            556788899999999999999999999999999999999999987754

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.79  E-value=6.8e-20  Score=184.71  Aligned_cols=143  Identities=17%  Similarity=0.208  Sum_probs=95.9

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+. .+|+.||||+.+...... ...+..                                  +..
T Consensus         6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~----------------------------------~~~   50 (381)
T cd05626           6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN-RNQVAH----------------------------------VKA   50 (381)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHHHH----------------------------------HHH
Confidence            45799999999999985 588999999886321000 000101                                  111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |..-+.+    +. ++  .+++.+..  .....++||||++|++|.+++......+        +        .....+.
T Consensus        51 E~~il~~----l~-h~--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~--------e--------~~~~~~~  107 (381)
T cd05626          51 ERDILAE----AD-NE--WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFP--------E--------VLARFYI  107 (381)
T ss_pred             HHHHHHh----cC-CC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCC--------H--------HHHHHHH
Confidence            2221111    11 12  23333332  2356799999999999999886433221        1        1123355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .++..++.+||..|++|+|+||.||+++.+|+++|+|||++..+
T Consensus       108 ~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626         108 AELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             HHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            67888999999999999999999999999999999999997644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=7.4e-20  Score=180.85  Aligned_cols=146  Identities=22%  Similarity=0.235  Sum_probs=97.8

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|+||+|+.. +|+.||||+.+........ +..                                  .+.
T Consensus         5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-~~~----------------------------------~~~   49 (333)
T cd05600           5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLN-EVR----------------------------------HVL   49 (333)
T ss_pred             EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhh-HHH----------------------------------HHH
Confidence            3568999999999999964 7899999998642211000 000                                  011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+..    +.   +-.+++++..  .....+|||||++|++|.+++......+        +.        ....+
T Consensus        50 ~e~~~l~~----~~---h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~--------~~--------~~~~~  106 (333)
T cd05600          50 TERDILTT----TK---SEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLS--------ED--------HARFY  106 (333)
T ss_pred             HHHHHHHh----CC---CCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCC--------HH--------HHHHH
Confidence            12221111    11   1122333322  2356799999999999999986433221        11        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|+||.||+++.+|.++|+|||++.....
T Consensus       107 ~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~  153 (333)
T cd05600         107 MAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT  153 (333)
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence            56788899999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.79  E-value=3.7e-19  Score=175.09  Aligned_cols=142  Identities=20%  Similarity=0.234  Sum_probs=93.2

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||+||+|+. .+|+.||||+.++..... ..+....                                  ..|.
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~----------------------------------~~e~   46 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ-DDDVECT----------------------------------MTEK   46 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh-ccHHHHH----------------------------------HHHH
Confidence            589999999999996 478999999886432100 0000000                                  0011


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ..+..    ..+++  .+++++..  .....++||||++|++|.+++......+        +.        ....+..+
T Consensus        47 ~~l~~----~~~h~--~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~--------~~--------~~~~~~~q  104 (320)
T cd05590          47 RILSL----ARNHP--FLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD--------EA--------RARFYAAE  104 (320)
T ss_pred             HHHHh----ccCCC--chhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCC--------HH--------HHHHHHHH
Confidence            11100    11111  12222222  2345699999999999998876543222        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++.+||+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       105 l~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~  146 (320)
T cd05590         105 ITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  146 (320)
T ss_pred             HHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence            888999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.1e-19  Score=181.87  Aligned_cols=144  Identities=20%  Similarity=0.216  Sum_probs=97.1

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+...... ......+                                  ..
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~----------------------------------~~   50 (364)
T cd05599           6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLE-KEQVAHV----------------------------------RA   50 (364)
T ss_pred             EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHH----------------------------------HH
Confidence            46899999999999996 579999999986321000 0000000                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |..-+..    +.   +-.+++++..  .....++||||++|++|.+++.....++        +.        ....+.
T Consensus        51 E~~il~~----l~---h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~--------~~--------~~~~~~  107 (364)
T cd05599          51 ERDILAE----AD---NPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFT--------EE--------ETRFYI  107 (364)
T ss_pred             HHHHHHh----CC---CCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCC--------HH--------HHHHHH
Confidence            2111111    11   2223333333  2356799999999999999886543222        11        112355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       108 ~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  152 (364)
T cd05599         108 AETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK  152 (364)
T ss_pred             HHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence            678889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.78  E-value=9.3e-20  Score=183.22  Aligned_cols=143  Identities=17%  Similarity=0.201  Sum_probs=95.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+...... .....                            .      +.
T Consensus         5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~-~~~~~----------------------------~------~~   49 (376)
T cd05598           5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM-RNQAA----------------------------H------VK   49 (376)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh-hhhHH----------------------------H------HH
Confidence            356899999999999995 579999999875321000 00000                            0      11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|..-+.+    +.   +-.+++.+..  .....++||||++|++|.+++......+        +        .....+
T Consensus        50 ~E~~il~~----l~---h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~--------~--------~~~~~~  106 (376)
T cd05598          50 AERDILAE----AD---NEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFE--------E--------DLARFY  106 (376)
T ss_pred             HHHHHHHh----CC---CCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCC--------H--------HHHHHH
Confidence            12221111    11   1223333332  2356799999999999999886433221        1        112234


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      ..++..++.+||..|++|+|+||+||+++.+|.++|+|||++..
T Consensus       107 ~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~  150 (376)
T cd05598         107 IAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG  150 (376)
T ss_pred             HHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcc
Confidence            56788899999999999999999999999999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=3.3e-19  Score=181.76  Aligned_cols=192  Identities=19%  Similarity=0.202  Sum_probs=120.6

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ...+|.||||.|+.|.++ +++.+|||+++.+.--+ ..|+..+..+.+++..                           
T Consensus       373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~~~~EkrI~~l---------------------------  424 (694)
T KOG0694|consen  373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVESLMCEKRIFEL---------------------------  424 (694)
T ss_pred             EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHHHHHHHHHHHH---------------------------
Confidence            457999999999999974 78999999998753211 1223333322222211                           


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                              .   ..+|.  +-..+..+  .++.+.||||+.||++..+.+.. .        +++.        -..+++
T Consensus       425 --------a---~~HPF--L~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~-~--------F~e~--------rarfya  474 (694)
T KOG0694|consen  425 --------A---NRHPF--LVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTD-V--------FSEP--------RARFYA  474 (694)
T ss_pred             --------h---ccCCe--EeecccccccCCeEEEEEEecCCCcEEEEEecc-c--------ccHH--------HHHHHH
Confidence                    1   12222  22233332  35669999999999966554421 1        1111        124566


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC-HHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME-RKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~-~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~  397 (433)
                      ..|..+|++||++||++||+|-+|||++.+|.++|+||||++.-- ...+.       +..-+..+.++.....-+.+..
T Consensus       475 Aev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~T-------sTfCGTpey~aPEil~e~~Yt~  547 (694)
T KOG0694|consen  475 AEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRT-------STFCGTPEFLAPEVLTEQSYTR  547 (694)
T ss_pred             HHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCcc-------ccccCChhhcChhhhccCcccc
Confidence            678899999999999999999999999999999999999998754 22211       1223344445554444444555


Q ss_pred             CCChHHHHHHHHHHh-hchhcc
Q 013944          398 GTNTLRVTMDLEDAL-GEVEFK  418 (433)
Q Consensus       398 ~~d~~~~~~~l~~~l-~~~~~~  418 (433)
                      .+|.|.|+-.|+++| |+..|.
T Consensus       548 aVDWW~lGVLlyeML~Gq~PF~  569 (694)
T KOG0694|consen  548 AVDWWGLGVLLYEMLVGESPFP  569 (694)
T ss_pred             hhhHHHHHHHHHHHHcCCCCCC
Confidence            666666665555443 555543

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.78  E-value=3.9e-19  Score=174.57  Aligned_cols=142  Identities=18%  Similarity=0.199  Sum_probs=93.8

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||.||+|+. .+|+.||||+.+...... ..+.....                                  .|.
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~----------------------------------~e~   46 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDVECTM----------------------------------VER   46 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHHHH----------------------------------HHH
Confidence            589999999999996 478999999987432110 00110000                                  011


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .-    .....+++  .+++.+..  .....++||||++|++|.+++......+        +..        ...+..+
T Consensus        47 ~~----l~~~~~hp--~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~--------~~~--------~~~~~~q  104 (316)
T cd05592          47 RV----LALAWEHP--FLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFD--------EAR--------ARFYAAE  104 (316)
T ss_pred             HH----HHhccCCC--CccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCC--------HHH--------HHHHHHH
Confidence            00    00111122  22333322  2345689999999999988876433222        111        1235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++.+||+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       105 i~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~  146 (316)
T cd05592         105 IICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKEN  146 (316)
T ss_pred             HHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence            888999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.78  E-value=2.7e-19  Score=176.24  Aligned_cols=142  Identities=18%  Similarity=0.182  Sum_probs=93.8

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||.||+|+. .+|+.||+|+........-.....+                                   ..|.
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~-----------------------------------~~e~   46 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHI-----------------------------------MSER   46 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHH-----------------------------------HHHH
Confidence            589999999999996 4788999999763211100000000                                   1111


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ..   +...+. ++  .+++++..  .....++||||++|++|.+++......+        +.        ....+..+
T Consensus        47 ~~---~l~~~~-h~--~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~--------~~~~~~~q  104 (325)
T cd05602          47 NV---LLKNVK-HP--FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL--------EP--------RARFYAAE  104 (325)
T ss_pred             HH---HHHhCC-CC--CCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCC--------HH--------HHHHHHHH
Confidence            10   111121 12  22333322  2356699999999999998886433221        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..+|.+||+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       105 i~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~  146 (325)
T cd05602         105 IASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN  146 (325)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence            889999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.78  E-value=2.5e-19  Score=176.49  Aligned_cols=142  Identities=20%  Similarity=0.224  Sum_probs=93.8

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||+||+|+. .+|+.||||+.+............+                                   ..|.
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~-----------------------------------~~e~   46 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHI-----------------------------------MAER   46 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHH-----------------------------------HHHH
Confidence            589999999999995 5899999999864321100000000                                   0111


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .   .+...+.+ +  .+++++..  .....++||||++|++|.+.+......+        +.        ....+..+
T Consensus        47 ~---~~l~~~~h-p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------~~~~~~~q  104 (325)
T cd05604          47 N---VLLKNVKH-P--FLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFP--------EP--------RARFYAAE  104 (325)
T ss_pred             H---HHHHhCCC-C--CCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCC--------HH--------HHHHHHHH
Confidence            1   11111211 2  22333322  2456799999999999988775432221        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++.+||+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       105 i~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~  146 (325)
T cd05604         105 IASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (325)
T ss_pred             HHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence            888999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.6e-19  Score=181.55  Aligned_cols=144  Identities=18%  Similarity=0.215  Sum_probs=96.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+........ ...+..                                  +.
T Consensus         5 ~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~----------------------------------~~   49 (377)
T cd05629           5 TVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFK-KDQLAH----------------------------------VK   49 (377)
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHH-hHHHHH----------------------------------HH
Confidence            356899999999999985 589999999875311000 000000                                  11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +.   +-.+++++..+  ....+|||||++|++|.+++......+        +        .....+
T Consensus        50 ~E~~il~~----l~---hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~--------~--------~~~~~~  106 (377)
T cd05629          50 AERDVLAE----SD---SPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFS--------E--------DVTRFY  106 (377)
T ss_pred             HHHHHHHh----CC---CCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCC--------H--------HHHHHH
Confidence            22222211    11   12233444332  345799999999999999886433221        1        112235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++..+|.+||+.|++|+|+||.||+++.+|.++++|||+++.+
T Consensus       107 ~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~  151 (377)
T cd05629         107 MAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGF  151 (377)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccc
Confidence            567888999999999999999999999999999999999998644

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.78  E-value=3.5e-19  Score=175.14  Aligned_cols=141  Identities=19%  Similarity=0.191  Sum_probs=92.3

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||.|+||+||+|+. .+|+.||+|+........-.....+++                                   |.
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~-----------------------------------e~   46 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMA-----------------------------------ER   46 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHH-----------------------------------HH
Confidence            589999999999996 478999999875321110000000000                                   11


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .   .+...+.+   -.+++++..  .....++||||++|++|.+.+......+        +.        ....+..+
T Consensus        47 ~---~~l~~~~h---~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------~~~~~~~q  104 (321)
T cd05603          47 N---VLLKNLKH---PFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFL--------EP--------RARFYAAE  104 (321)
T ss_pred             H---HHHHhCCC---CCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCC--------HH--------HHHHHHHH
Confidence            0   01111111   122233322  2345699999999999987775432221        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      +..+|.+||..|++|+|+||+||+++.+|.++|+|||++..
T Consensus       105 i~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~  145 (321)
T cd05603         105 VASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKE  145 (321)
T ss_pred             HHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCcc
Confidence            88999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.78  E-value=4.9e-19  Score=174.38  Aligned_cols=143  Identities=18%  Similarity=0.220  Sum_probs=93.5

Q ss_pred             ccccccccceeEEEEe----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          163 EPVAAASFGQVYRGST----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +.||+|+||.||+|+.    .+|+.||||+.+......-..+...                                  +
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~----------------------------------~   47 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAH----------------------------------T   47 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHH----------------------------------H
Confidence            4699999999999985    3688999998763211100001101                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+..+    . ++  .+.+++..  .....++||||++|++|.+.+......+        +.        ....
T Consensus        48 ~~E~~il~~l----~-hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~--------~~~~  104 (323)
T cd05584          48 KAERNILEAV----K-HP--FIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFM--------ED--------TACF  104 (323)
T ss_pred             HHHHHHHHhC----C-CC--chhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCC--------HH--------HHHH
Confidence            1222222211    1 11  22222222  2345699999999999998876433221        11        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++..++.+||+.|++|+|+||+||+++.+|.++|+|||+++..
T Consensus       105 ~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (323)
T cd05584         105 YLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKES  150 (323)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence            4557888999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.78  E-value=2.2e-19  Score=176.87  Aligned_cols=141  Identities=17%  Similarity=0.160  Sum_probs=94.5

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||.||+|+. .+|+.||||+.+...... ..+...                                  +..|.
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~----------------------------------~~~e~   46 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-KDEVAH----------------------------------TLTES   46 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hHHHHH----------------------------------HHHHH
Confidence            589999999999995 589999999986421100 000000                                  01122


Q ss_pred             HHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ..+.+    +. ++  .+.+++.  ......++||||++|++|.+.+......+        +.        ....+..+
T Consensus        47 ~~l~~----l~-hp--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------~~~~~~~q  103 (323)
T cd05571          47 RVLQN----TR-HP--FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS--------ED--------RARFYGAE  103 (323)
T ss_pred             HHHHh----CC-CC--CCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HH--------HHHHHHHH
Confidence            22211    11 12  2222222  23356799999999999988876433221        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..+|.+||+.|++|+|+||.||+++.+|.++|+|||+++..
T Consensus       104 i~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~  145 (323)
T cd05571         104 IVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             HHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence            888999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.77  E-value=3.7e-19  Score=175.21  Aligned_cols=142  Identities=18%  Similarity=0.189  Sum_probs=94.1

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|++|+||+|+. .+|+.||||+..+..... ..+..                                  ++..|.
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~----------------------------------~~~~e~   46 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-KKEQK----------------------------------HIMAER   46 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHH----------------------------------HHHHHH
Confidence            589999999999996 589999999876421100 00000                                  001111


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ..   +...+.   +-.+++++..  .....++||||++|++|.+++......+        +.        ....+..+
T Consensus        47 ~~---~~~~l~---hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------~~--------~~~~~~~q  104 (323)
T cd05575          47 NV---LLKNVK---HPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFP--------EP--------RARFYAAE  104 (323)
T ss_pred             HH---HHhhCC---CCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCC--------HH--------HHHHHHHH
Confidence            11   111121   1223333322  2356799999999999988876433221        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++.+||..|++|+|+||+||+++.+|.++|+|||++...
T Consensus       105 i~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~  146 (323)
T cd05575         105 IASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (323)
T ss_pred             HHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence            888999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.77  E-value=3.4e-19  Score=175.59  Aligned_cols=141  Identities=17%  Similarity=0.168  Sum_probs=93.9

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||.||+|+. .+|+.||+|+.+...... ..++..                                  +..|.
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~----------------------------------~~~E~   46 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEVAH----------------------------------TVTES   46 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHHHH----------------------------------HHHHH
Confidence            589999999999995 589999999986432110 001000                                  11122


Q ss_pred             HHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      +.+.+    +.+ +  .+++++.  ......++||||++|++|.+++......+        +.        ....+..+
T Consensus        47 ~~l~~----l~h-p--~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~--------~~--------~~~~~~~q  103 (323)
T cd05595          47 RVLQN----TRH-P--FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE--------RARFYGAE  103 (323)
T ss_pred             HHHHh----CCC-C--CCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HH--------HHHHHHHH
Confidence            22211    111 1  1222222  22356699999999999988776433221        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ++.++.+||..|++|+|+||.||+++.+|.++|+|||++...
T Consensus       104 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  145 (323)
T cd05595         104 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence            888999999999999999999999999999999999987753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.77  E-value=5e-19  Score=174.77  Aligned_cols=141  Identities=18%  Similarity=0.182  Sum_probs=94.6

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||+||+|+. .+|+.||||+.++..... ..+..                                  .+..|.
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~----------------------------------~~~~E~   46 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-KDEVA----------------------------------HTLTES   46 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH----------------------------------HHHHHH
Confidence            589999999999995 589999999986432110 00000                                  011222


Q ss_pred             HHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      +.+..    +. ++  .+++++.  ......++||||++|++|.+.+......+        +.+        ...+..+
T Consensus        47 ~~l~~----l~-hp--~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~--------~~~--------~~~~~~q  103 (328)
T cd05593          47 RVLKN----TR-HP--FLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFS--------EDR--------TRFYGAE  103 (328)
T ss_pred             HHHHh----CC-CC--CCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCC--------HHH--------HHHHHHH
Confidence            22211    11 12  2222222  23356799999999999988775432221        111        1235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++.+||+.|++|+|+||.||+++.+|.++|+|||+++..
T Consensus       104 i~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~  145 (328)
T cd05593         104 IVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (328)
T ss_pred             HHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence            888999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.77  E-value=9.1e-20  Score=182.29  Aligned_cols=144  Identities=22%  Similarity=0.257  Sum_probs=97.6

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+. .+|+.||||+.+...... ......                                  +..
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~----------------------------------~~~   50 (360)
T cd05627           6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE-KEQVAH----------------------------------IRA   50 (360)
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh-hhhHHH----------------------------------HHH
Confidence            46899999999999996 479999999986321000 000000                                  111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+..    +.   +-.+++.+..+  ....+|||||++|++|.+++......+        +.        ....+.
T Consensus        51 e~~~l~~----l~---~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~--------~~--------~~~~~~  107 (360)
T cd05627          51 ERDILVE----AD---GAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLS--------EE--------ATQFYI  107 (360)
T ss_pred             HHHHHHh----CC---CCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCC--------HH--------HHHHHH
Confidence            2222211    11   12234444332  355699999999999999886543222        11        122355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       108 ~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~  152 (360)
T cd05627         108 AETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK  152 (360)
T ss_pred             HHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence            677889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.77  E-value=7.4e-19  Score=174.54  Aligned_cols=146  Identities=16%  Similarity=0.143  Sum_probs=96.4

Q ss_pred             CCccccccccceeEEEEec-C-CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGSTL-D-GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~-G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+.||+|+||.||+|+.+ + +..||||+........ ......                                  +
T Consensus        34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~-~~~~~~----------------------------------~   78 (340)
T PTZ00426         34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIK-QKQVDH----------------------------------V   78 (340)
T ss_pred             EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhh-hhhHHH----------------------------------H
Confidence            3568999999999999853 3 3689999875211000 000000                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+..+    . ++  .+++.+..  .....++||||++|++|.+++......+        +.        ....
T Consensus        79 ~~E~~~l~~l----~-hp--~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~--------~~--------~~~~  135 (340)
T PTZ00426         79 FSERKILNYI----N-HP--FCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFP--------ND--------VGCF  135 (340)
T ss_pred             HHHHHHHHhC----C-CC--CCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HH--------HHHH
Confidence            1222222221    1 11  22333322  2245699999999999999886543222        11        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..++.+||..|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       136 ~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~  183 (340)
T PTZ00426        136 YAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT  183 (340)
T ss_pred             HHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence            566788899999999999999999999999999999999999987653

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=5.1e-19  Score=175.73  Aligned_cols=149  Identities=21%  Similarity=0.274  Sum_probs=98.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|+||+|+. .+|+.||||+.+...... ..+...++.+..++..+                         
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~e~~~l~~~-------------------------   58 (350)
T cd05573           5 VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK-RNQIAHVRAERDILADA-------------------------   58 (350)
T ss_pred             EEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh-ccHHHHHHHHHHHHHhc-------------------------
Confidence            346799999999999996 479999999986321100 00111111111111110                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       .+.|+.++...+.+             ....++||||++|++|.+++......+        +.        ....+..
T Consensus        59 -~~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~--------~~~~i~~  108 (350)
T cd05573          59 -DSPWIVKLYYSFQD-------------EEHLYLVMEYMPGGDLMNLLIRKDVFP--------EE--------TARFYIA  108 (350)
T ss_pred             -CCCCccchhhheec-------------CCeEEEEEcCCCCCCHHHHHHHcCCCC--------HH--------HHHHHHH
Confidence             12233333333322             234599999999999999886542222        11        1123556


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ++..+|.+||..|++|+|+||.||+++.+|.++|+|||++..+...
T Consensus       109 qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573         109 ELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             HHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            7888999999999999999999999999999999999998876543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.77  E-value=1.7e-19  Score=179.67  Aligned_cols=142  Identities=19%  Similarity=0.232  Sum_probs=102.1

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLR--HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~--~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      +.||+|-||.||.|.+....+||||.++++..  +.+.+++++|+.                                 .
T Consensus       212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~---------------------------------L  258 (468)
T KOG0197|consen  212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKK---------------------------------L  258 (468)
T ss_pred             HHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHh---------------------------------C
Confidence            46999999999999996667999999998632  333334444431                                 1


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .|.|++++...+...             .+.+|||||++.|+|.+++....+..            +.. .+++ .++.+
T Consensus       259 ~H~~lV~l~gV~~~~-------------~piyIVtE~m~~GsLl~yLr~~~~~~------------l~~-~~Ll-~~a~q  311 (468)
T KOG0197|consen  259 RHEKLVKLYGVCTKQ-------------EPIYIVTEYMPKGSLLDYLRTREGGL------------LNL-PQLL-DFAAQ  311 (468)
T ss_pred             cccCeEEEEEEEecC-------------CceEEEEEecccCcHHHHhhhcCCCc------------cch-HHHH-HHHHH
Confidence            223333333222211             23599999999999999998632211            111 1233 25678


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      |+.|+.||.++++|||||-+.||||+.++.+||+|||+++.+.+
T Consensus       312 IaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d  355 (468)
T KOG0197|consen  312 IAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGD  355 (468)
T ss_pred             HHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCC
Confidence            99999999999999999999999999999999999999995544

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=8.4e-19  Score=171.78  Aligned_cols=140  Identities=18%  Similarity=0.173  Sum_probs=93.1

Q ss_pred             ccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          165 VAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       165 igsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      ||+|+||.||+|+. .+|+.||+|+.+...... ..+...                                  +..|..
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~----------------------------------~~~E~~   45 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSEVTH----------------------------------TLAERT   45 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHH----------------------------------HHHHHH
Confidence            68999999999996 478999999875321000 000000                                  111222


Q ss_pred             HHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      .+.++     ++++  +++.+..  .....++||||++|++|.+++......+        +.        ....+..++
T Consensus        46 ~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------~~--------~~~~~~~qi  102 (312)
T cd05585          46 VLAQV-----NCPF--IVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFD--------LS--------RARFYTAEL  102 (312)
T ss_pred             HHHhC-----CCCc--EeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCC--------HH--------HHHHHHHHH
Confidence            22221     1222  2222222  2356799999999999998886433222        11        112345678


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++.+||+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       103 ~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~  143 (312)
T cd05585         103 LCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLN  143 (312)
T ss_pred             HHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccC
Confidence            88999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.77  E-value=1.9e-18  Score=170.19  Aligned_cols=144  Identities=19%  Similarity=0.218  Sum_probs=95.3

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+. .+|+.||||+.+...... ..+....                                  ..
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~----------------------------------~~   49 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDVECT----------------------------------MV   49 (323)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHH----------------------------------HH
Confidence            35799999999999995 579999999876421100 0011000                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.    ...+.+.  +++++..  .....++||||++|++|.+++......+        +.+        ...+.
T Consensus        50 e~~~l~----~~~~~~~--i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~--------~~~--------~~~i~  107 (323)
T cd05615          50 EKRVLA----LQDKPPF--LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFK--------EPQ--------AVFYA  107 (323)
T ss_pred             HHHHHH----hccCCCc--hhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCC--------HHH--------HHHHH
Confidence            221111    1111221  2222222  2345699999999999998876433222        111        12355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .++..++.+||+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       108 ~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~  151 (323)
T cd05615         108 AEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH  151 (323)
T ss_pred             HHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence            67888999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=5e-19  Score=172.30  Aligned_cols=191  Identities=17%  Similarity=0.178  Sum_probs=125.4

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |--.+.||.|.-++||+|+ .+.++.||||+..   -+....|+..++.                               
T Consensus        28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~in---LEkc~~~ld~l~k-------------------------------   73 (516)
T KOG0582|consen   28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIIN---LEKCNNDLDALRK-------------------------------   73 (516)
T ss_pred             eeEEEEEeccceeEeeeeeecccCCEEEEEEee---hhhhhhhHHHHHH-------------------------------
Confidence            3345679999899999999 4788999999985   2233344444443                               


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                         |..++..+     ++|+  |-+.+..+  ....|+||-|+.||++.+++...-.-.              ..+..+.
T Consensus        74 ---E~~~msl~-----~HPN--Iv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~G--------------l~E~~Ia  129 (516)
T KOG0582|consen   74 ---EVQTMSLI-----DHPN--IVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDG--------------LEEASIA  129 (516)
T ss_pred             ---HHHHhhhc-----CCCC--cceEEEEEEecceeEEeehhhcCCcHHHHHHHHcccc--------------ccHHHHH
Confidence               33333222     1121  22222222  356799999999999999987542110              1122344


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHH-HHhcCC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHS-LTEMDV  394 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~-l~~~g~  394 (433)
                      .+.+++..+|.|||.+|.+|||+|+||||++.+|.|+|.|||.+..+-....+...++ ..++..-+|-..+. +....-
T Consensus       130 ~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf-~tfvgtp~wmAPEvl~q~~~G  208 (516)
T KOG0582|consen  130 TILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRF-NTFVGTPCWMAPEVLMQQLHG  208 (516)
T ss_pred             HHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEee-ccccCcccccChHHhhhcccC
Confidence            5777888999999999999999999999999999999999999888755443333332 23333444445555 333334


Q ss_pred             CCCCCChHHHHHHH
Q 013944          395 VRPGTNTLRVTMDL  408 (433)
Q Consensus       395 ~~~~~d~~~~~~~l  408 (433)
                      +.-+.|+|.|+...
T Consensus       209 YdfKaDIwSfGITA  222 (516)
T KOG0582|consen  209 YDFKADIWSFGITA  222 (516)
T ss_pred             ccchhhhhhhhHHH
Confidence            46677888777533

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.76  E-value=3.1e-19  Score=165.86  Aligned_cols=162  Identities=19%  Similarity=0.289  Sum_probs=113.8

Q ss_pred             HHHHHHHHHhCCChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCc-hhhHHHHHHHHHHHHHHHHHHHhh
Q 013944          140 IAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL-RHVVVRDIYILRIGLGLLQKIAKR  217 (433)
Q Consensus       140 ~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~-~~~~~~Dl~~l~~~~~~~~~~~~~  217 (433)
                      +..+.-+..|.++++++|+-.  +.+|.||||.||+|.. .+|+.||||....+. .+.+..++.+|.            
T Consensus        18 ~~~KLd~~sL~K~PEEVFDi~--~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQ------------   83 (502)
T KOG0574|consen   18 DGFKLDSSALNKPPEEVFDIV--GKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQ------------   83 (502)
T ss_pred             cccccChhhhcCChHHHHHHH--HHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHH------------
Confidence            444555677888999998754  4799999999999986 489999999765321 122222333332            


Q ss_pred             cCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCC
Q 013944          218 KSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSV  295 (433)
Q Consensus       218 ~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~  295 (433)
                                       ++                   ..-+|.+.|..|  .+..++|||||..|+++|.++.++..  
T Consensus        84 -----------------QC-------------------~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~--  125 (502)
T KOG0574|consen   84 -----------------QC-------------------KSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKP--  125 (502)
T ss_pred             -----------------Hc-------------------CCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCC--
Confidence                             11                   111233333332  25669999999999999999865321  


Q ss_pred             CCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH
Q 013944          296 DGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       296 ~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~  366 (433)
                           +++.       .+ ..+.+....+|+|||...-+|||+|.||||++.+|..+|.|||.++++++..
T Consensus       126 -----L~E~-------EI-s~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM  183 (502)
T KOG0574|consen  126 -----LSEQ-------EI-SAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM  183 (502)
T ss_pred             -----ccHH-------HH-HHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence                 1121       11 1233445679999999999999999999999999999999999999998754

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.76  E-value=9.9e-18  Score=165.00  Aligned_cols=144  Identities=18%  Similarity=0.206  Sum_probs=96.0

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+...... ..+...                                  +..
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~----------------------------------~~~   49 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDVEC----------------------------------TMV   49 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHH----------------------------------HHH
Confidence            46799999999999986 478999999986432110 000000                                  011


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.    ...+++.  ++.++..  .....++||||++|++|.+.+......+        +..        ...+.
T Consensus        50 e~~~l~----~~~~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~--------~~~--------~~~~~  107 (323)
T cd05616          50 EKRVLA----LSGKPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFK--------EPH--------AVFYA  107 (323)
T ss_pred             HHHHHH----hccCCCe--EeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCC--------HHH--------HHHHH
Confidence            211111    1122222  3333322  2355689999999999988876433222        111        12355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .++..++.+||..|++|+|+||+||+++.+|.++|+|||++...
T Consensus       108 ~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~  151 (323)
T cd05616         108 AEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  151 (323)
T ss_pred             HHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence            67888999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.76  E-value=3.3e-18  Score=172.40  Aligned_cols=143  Identities=17%  Similarity=0.230  Sum_probs=95.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+. .+|+.||||+.+..... .......                                  +..
T Consensus         6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-~~~~~~~----------------------------------~~~   50 (382)
T cd05625           6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL-LRNQVAH----------------------------------VKA   50 (382)
T ss_pred             EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh-hHHHHHH----------------------------------HHH
Confidence            46799999999999995 57899999987632100 0000000                                  111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +.   +-.+++++..+  ....+|||||++|++|.+++......+        +        .....+.
T Consensus        51 E~~il~~----~~---h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~--------e--------~~~~~~~  107 (382)
T cd05625          51 ERDILAE----AD---NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFP--------E--------DLARFYI  107 (382)
T ss_pred             HHHHHHh----CC---CCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCC--------H--------HHHHHHH
Confidence            2222111    11   12233444332  345699999999999998876432211        1        1123355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .++..++.++|..||+|+|+||+|||++.+|.++|+|||++..+
T Consensus       108 ~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625         108 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             HHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            67888999999999999999999999999999999999997543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.76  E-value=1.8e-18  Score=169.92  Aligned_cols=141  Identities=18%  Similarity=0.197  Sum_probs=94.2

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||.||+|+. .+|+.||||+.++.... ...+....                                  ..|.
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~----------------------------------~~e~   46 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-IDDDVECT----------------------------------MVEK   46 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hcchHHHH----------------------------------HHHH
Confidence            589999999999996 47899999998743211 00011111                                  1111


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ..+..   .. +++  .+++++..  .....++||||++|++|.+++......+        +.        ....+..+
T Consensus        47 ~~l~~---~~-~~~--~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~--------~~--------~~~~~~~q  104 (316)
T cd05620          47 RVLAL---AW-ENP--FLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFD--------LY--------RATFYAAE  104 (316)
T ss_pred             HHHHh---cc-CCC--CccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCC--------HH--------HHHHHHHH
Confidence            11111   11 122  23333332  2356699999999999988876432221        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      +..++.+||+.|++|+|+||+||+++.+|.++|+|||++..
T Consensus       105 i~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~  145 (316)
T cd05620         105 IVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKE  145 (316)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence            88899999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.76  E-value=1.4e-17  Score=152.63  Aligned_cols=164  Identities=20%  Similarity=0.227  Sum_probs=108.7

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchh--hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRH--VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~--~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...++||+|++|+||+|..++|+.||||+.+++...  ....+.+.+..          .  ......      -..+..
T Consensus        18 ~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~------~~~~~~   79 (198)
T cd05144          18 SLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGD----------R--KHASWL------YLSRLA   79 (198)
T ss_pred             hcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhc----------c--ccchhH------HHhHHH
Confidence            345789999999999999889999999998764311  00000000000          0  000000      011122


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +..|...+..+...     .+.+|.++..  ...++||||++|++|.+.....              .   .     ..+
T Consensus        80 ~~~E~~~l~~l~~~-----~i~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~~--------------~---~-----~~~  130 (198)
T cd05144          80 AQKEFAALKALYEE-----GFPVPKPIDW--NRHAVVMEYIDGVELYRVRVLE--------------D---P-----EEV  130 (198)
T ss_pred             HHHHHHHHHHHHHc-----CCCCCceeec--CCceEEEEEeCCcchhhccccc--------------c---H-----HHH
Confidence            34566666665432     2456766653  4569999999999887653200              0   0     113


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAM  370 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~  370 (433)
                      ..++..++.++|..|++|+|+||+||+++.+++++++|||++..+..+.+..+
T Consensus       131 ~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~~~~~~~  183 (198)
T cd05144         131 LDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDHPNAEEL  183 (198)
T ss_pred             HHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCCCccHHHH
Confidence            34566788999999999999999999999999999999999999988877765

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.76  E-value=9.8e-18  Score=164.91  Aligned_cols=142  Identities=18%  Similarity=0.189  Sum_probs=93.9

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||+||+|+. .+|+.||||+.+...... ..+....                                  ..|.
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~----------------------------------~~e~   46 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDDVDCT----------------------------------MTEK   46 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhHHHHH----------------------------------HHHH
Confidence            589999999999996 478999999986432110 0000000                                  1111


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      +-+    ....+++  .+++++..  .....++||||++|++|.+.+......+        +.        ....+..+
T Consensus        47 ~il----~~~~~hp--~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~--------~~--------~~~~~~~q  104 (321)
T cd05591          47 RIL----ALAAKHP--FLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFD--------EP--------RSRFYAAE  104 (321)
T ss_pred             HHH----HhccCCC--CccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCC--------HH--------HHHHHHHH
Confidence            111    1111222  23333332  2345699999999999988876443221        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++.+||+.|++|+|+||.||+++.+|.++|+|||++...
T Consensus       105 i~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~  146 (321)
T cd05591         105 VTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEG  146 (321)
T ss_pred             HHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence            888999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.76  E-value=5e-18  Score=167.62  Aligned_cols=146  Identities=17%  Similarity=0.192  Sum_probs=96.4

Q ss_pred             CccccccccceeEEEEe----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGST----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|+||.||+++.    .+|+.||+|+.+.............                                  
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~----------------------------------   50 (332)
T cd05614           5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEH----------------------------------   50 (332)
T ss_pred             EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHH----------------------------------
Confidence            46799999999999985    3689999998753211100000000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+.+++.  ++.++.  ......+++|||++|++|.+++......+        +.        ...
T Consensus        51 ~~~e~~~l~----~l~~~~~--i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------~~--------~~~  108 (332)
T cd05614          51 TRTERNVLE----HVRQSPF--LVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFS--------ED--------EVR  108 (332)
T ss_pred             HHHHHHHHH----hccCCCC--cccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HH--------HHH
Confidence            011222221    2222232  222322  22355689999999999998876443222        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..+++.+|.+||+.|++|+|+||.||+++.+|.++|+|||++..+.
T Consensus       109 ~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~  156 (332)
T cd05614         109 FYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL  156 (332)
T ss_pred             HHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence            355678889999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.76  E-value=5.6e-18  Score=166.82  Aligned_cols=143  Identities=17%  Similarity=0.188  Sum_probs=95.8

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+...... ..+...                                  +..
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~~----------------------------------~~~   49 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDVEC----------------------------------TMV   49 (324)
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHH----------------------------------HHH
Confidence            46799999999999996 478899999986432110 001100                                  111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |.+.+..    ..+.+  .++..+..  .....++||||++|++|.+++......+        +..        ...+.
T Consensus        50 e~~~l~~----~~~~~--~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~--------~~~--------~~~~~  107 (324)
T cd05587          50 EKRVLAL----PGKPP--FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFK--------EPH--------AVFYA  107 (324)
T ss_pred             HHHHHHh----cCCCC--ceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCC--------HHH--------HHHHH
Confidence            2222211    11222  23333322  2356799999999999988876432221        111        12355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      .+++.++.+||..|++|+|+||+||+++.+|.++|+|||++..
T Consensus       108 ~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~  150 (324)
T cd05587         108 AEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKE  150 (324)
T ss_pred             HHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCccee
Confidence            6788899999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.75  E-value=8.3e-18  Score=155.94  Aligned_cols=148  Identities=16%  Similarity=0.226  Sum_probs=103.3

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +-..+.+|.|.||.||.+.. ++..+|||+.+|.....-.   ...+                          +...=-|
T Consensus        33 y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~---~~~~--------------------------f~~g~~~   82 (232)
T PRK10359         33 IKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTER---FLKS--------------------------FVKGDYY   82 (232)
T ss_pred             eEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHH---HHHh--------------------------hhhhHHH
Confidence            33457899999999999765 6779999999987543210   0000                          0000113


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceee---c-----ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVF---R-----YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~---~-----~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                      ..|++++.++..     +.+..|..+   .     .+++..+|+|||++|.+|.++...            ++       
T Consensus        83 e~Ea~~l~rL~~-----~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~------------~~-------  138 (232)
T PRK10359         83 ENLIVQTDRVRS-----EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI------------SE-------  138 (232)
T ss_pred             HHHHHHHHHHHH-----CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc------------cH-------
Confidence            568888888743     233334333   1     135678999999999999876321            01       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~  366 (433)
                       .    ...++..++.++|+.|++|+||||+|++++++| ++++|||.++....+.
T Consensus       139 -~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~  188 (232)
T PRK10359        139 -D----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK  188 (232)
T ss_pred             -H----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh
Confidence             0    122466789999999999999999999999999 9999999998876543

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.75  E-value=1.4e-18  Score=171.56  Aligned_cols=143  Identities=18%  Similarity=0.198  Sum_probs=94.5

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      +.||+|+||+||+|+. .+|+.||+|+.+...... ..+...+.                                  .|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~----------------------------------~E   45 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND-DEDIDWVQ----------------------------------TE   45 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc-hhHHHHHH----------------------------------HH
Confidence            3689999999999996 578999999986432111 00111111                                  11


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ..-+.    ...+++  .+++++..  ..+..++||||++|++|.+.+......+        +.        ....+..
T Consensus        46 ~~~l~----~~~~hp--~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~--------~~--------~~~~i~~  103 (329)
T cd05618          46 KHVFE----QASNHP--FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--------EE--------HARFYSA  103 (329)
T ss_pred             HHHHH----hcCCCC--cCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCC--------HH--------HHHHHHH
Confidence            11111    111122  22223322  2356799999999999988775433222        11        1123556


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +++.++.++|+.|++|+|+||.||+++.+|.++|+|||++...
T Consensus       104 qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~  146 (329)
T cd05618         104 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  146 (329)
T ss_pred             HHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence            7888999999999999999999999999999999999998753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.75  E-value=1.8e-18  Score=167.09  Aligned_cols=179  Identities=25%  Similarity=0.356  Sum_probs=115.8

Q ss_pred             cccCCccccccccceeEEEEe-cCCCEEEEEEcCCCc---hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          158 SFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL---RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       158 ~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~---~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      .+.-.+-||.|+||.||.+.. ++|+..|||...-..   .+.+..++.+|+       ++                   
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~-------~l-------------------   71 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILS-------RL-------------------   71 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHH-------hC-------------------
Confidence            344567899999999999996 469999999754321   112233333332       21                   


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                             .+.|++++.+.......           ....+.|||++||+|.+++...++ .      +++        .+
T Consensus        72 -------~~p~IV~~~G~~~~~~~-----------~~~~i~mEy~~~GsL~~~~~~~g~-~------l~E--------~~  118 (313)
T KOG0198|consen   72 -------NHPNIVQYYGSSSSREN-----------DEYNIFMEYAPGGSLSDLIKRYGG-K------LPE--------PL  118 (313)
T ss_pred             -------CCCCEEeeCCccccccC-----------eeeEeeeeccCCCcHHHHHHHcCC-C------CCH--------HH
Confidence                   02233332221111000           145899999999999999986543 1      111        23


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc-CCcEEEEecccccccCH--HH---HHHHH--------HHHH-H-H
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMER--KH---QFAML--------ASIV-H-I  377 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l~~--~~---~~~~~--------~~~~-~-~  377 (433)
                      .....+++..+|.|||++||+|||+||.|||+++ +|.+||+|||+++....  ..   ...+.        +.+. + .
T Consensus       119 v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~  198 (313)
T KOG0198|consen  119 VRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEV  198 (313)
T ss_pred             HHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCc
Confidence            3457788899999999999999999999999999 79999999999887763  11   00000        1111 1 1


Q ss_pred             H--hcCHHHHHHHHHhcCCC
Q 013944          378 V--NGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       378 ~--~~d~~~~~~~l~~~g~~  395 (433)
                      .  ..|.|+++..+++|...
T Consensus       199 ~~~~sDiWSlGCtVvEM~Tg  218 (313)
T KOG0198|consen  199 ARRESDIWSLGCTVVEMLTG  218 (313)
T ss_pred             CCccchhhhcCCEEEeccCC
Confidence            2  45777777777777664

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.75  E-value=3.8e-19  Score=180.24  Aligned_cols=183  Identities=16%  Similarity=0.145  Sum_probs=132.6

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCC------chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPN------LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~------~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      |-..+.+|.||-|.|-.|+. .+|+.+|||++...      ....|.++|-+|+                          
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMk--------------------------   67 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMK--------------------------   67 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHH--------------------------
Confidence            34467899999999999995 79999999987643      2456788888888                          


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                             ..||.|..++.+.+.+.             +..|||.||++||.|.+++..+++++        +++..    
T Consensus        68 -------Li~HpnVl~LydVwe~~-------------~~lylvlEyv~gGELFdylv~kG~l~--------e~eaa----  115 (786)
T KOG0588|consen   68 -------LIEHPNVLRLYDVWENK-------------QHLYLVLEYVPGGELFDYLVRKGPLP--------EREAA----  115 (786)
T ss_pred             -------HhcCCCeeeeeeeeccC-------------ceEEEEEEecCCchhHHHHHhhCCCC--------CHHHH----
Confidence                   34666766666555444             44499999999999999998776554        22111    


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHH------------H---
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIV------------H---  376 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~------------~---  376 (433)
                          -...||..++.|+|..+|+|||+||.|+|++.+++|||+||||+..-.+..   ++++-+            +   
T Consensus       116 ----~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk---lLeTSCGSPHYA~PEIV~G~pY  188 (786)
T KOG0588|consen  116 ----HFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK---LLETSCGSPHYAAPEIVSGRPY  188 (786)
T ss_pred             ----HHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCc---cccccCCCcccCCchhhcCCCC
Confidence                144567789999999999999999999999999999999999997543321   222211            1   


Q ss_pred             -HHhcCHHHHHHHHHhcCCCCCCCChHHHHH
Q 013944          377 -IVNGDWQSLVHSLTEMDVVRPGTNTLRVTM  406 (433)
Q Consensus       377 -~~~~d~~~~~~~l~~~g~~~~~~d~~~~~~  406 (433)
                       -...|+|+++-.|+.+=+..=..|-+.++.
T Consensus       189 dG~~sDVWSCGVILfALLtG~LPFdDdNir~  219 (786)
T KOG0588|consen  189 DGRPSDVWSCGVILFALLTGKLPFDDDNIRV  219 (786)
T ss_pred             CCCccccchhHHHHHHHHhCCCCCCCccHHH
Confidence             335688888888888644433344444333

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.75  E-value=3.3e-18  Score=164.95  Aligned_cols=142  Identities=20%  Similarity=0.270  Sum_probs=97.1

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|++|.||+|+.+ +|+.||||+.+....     +.+..++.+++                             
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~-----------------------------   55 (287)
T cd07848           5 VLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLR-----------------------------   55 (287)
T ss_pred             EEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHH-----------------------------
Confidence            3567999999999999964 789999998764321     11122222222                             


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                          ...+.|+.++.+.+...             ...++||||++|+.+..+.....+.+        +..        .
T Consensus        56 ----~l~h~~iv~~~~~~~~~-------------~~~~lv~e~~~~~~l~~~~~~~~~~~--------~~~--------~  102 (287)
T cd07848          56 ----TLKQENIVELKEAFRRR-------------GKLYLVFEYVEKNMLELLEEMPNGVP--------PEK--------V  102 (287)
T ss_pred             ----hCCCccccchhhhEecC-------------CEEEEEEecCCCCHHHHHHhcCCCCC--------HHH--------H
Confidence                11234555555444332             34499999999987765543221111        111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+..++..++.+||..|++|+|+||+||+++.++.++|+|||++..+..
T Consensus       103 ~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  152 (287)
T cd07848         103 RSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE  152 (287)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence            23556788899999999999999999999999999999999999887643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.75  E-value=1e-17  Score=161.87  Aligned_cols=148  Identities=15%  Similarity=0.115  Sum_probs=97.4

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|.. .+|+.||||+...........+                                   ..+.+
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~-----------------------------------~~~~~   49 (285)
T cd05631           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGE-----------------------------------AMALN   49 (285)
T ss_pred             EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhH-----------------------------------HHHHH
Confidence            46799999999999995 6899999998764321110000                                   01122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+.++    .+..-+.....+ ......+++|||++|++|.+.+.......      +++..        ...+..+
T Consensus        50 E~~il~~l----~~~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~~~~~~~~~------~~~~~--------~~~~~~q  110 (285)
T cd05631          50 EKRILEKV----NSRFVVSLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPG------FDEQR--------AIFYAAE  110 (285)
T ss_pred             HHHHHHhc----CCCcEEEEEEEE-ccCCeEEEEEEecCCCcHHHHHHhhCCCC------CCHHH--------HHHHHHH
Confidence            33333222    221112222222 22356799999999999987765322111      11111        1235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++.++.+||+.|++|+|+||.||+++.++.++|+|||++..+.
T Consensus       111 i~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05631         111 LCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIP  153 (285)
T ss_pred             HHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence            8889999999999999999999999999999999999988764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.75  E-value=3.3e-19  Score=175.91  Aligned_cols=147  Identities=20%  Similarity=0.261  Sum_probs=97.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+...... ......+                                  .
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~----------------------------------~   49 (330)
T cd05601           5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA-QETVSFF----------------------------------E   49 (330)
T ss_pred             EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHH----------------------------------H
Confidence            356899999999999995 589999999986421100 0001111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.    .. +++  .+++++..  .....++||||++|++|.+++....+.       +++.        ....+
T Consensus        50 ~e~~i~~----~~-~~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------l~~~--------~~~~~  107 (330)
T cd05601          50 EERDILS----IS-NSP--WIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQ-------FDED--------MAQFY  107 (330)
T ss_pred             HHHHHHH----hC-CCC--CCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCC-------CCHH--------HHHHH
Confidence            1111111    11 111  22333322  235579999999999999988653110       1111        12235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..+|.++|+.|++|+|+||.||+++.+|.++|+|||++..+..
T Consensus       108 ~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601         108 LAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA  154 (330)
T ss_pred             HHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence            56788899999999999999999999999999999999999987643

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.75  E-value=6.8e-18  Score=166.91  Aligned_cols=191  Identities=22%  Similarity=0.239  Sum_probs=125.5

Q ss_pred             ChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 013944          152 PVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGK  230 (433)
Q Consensus       152 ~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~  230 (433)
                      ++..+|+-|.++.+|+|.||.||-|.. ++|+.||||++..---.. ..+ ..||                         
T Consensus       559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~-kqe-sqlR-------------------------  611 (888)
T KOG4236|consen  559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT-KQE-SQLR-------------------------  611 (888)
T ss_pred             hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCC-chH-HHHH-------------------------
Confidence            467788888899999999999999995 699999999875311000 000 1122                         


Q ss_pred             HhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          231 GLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       231 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                               +|.+-++.    . +++.+.--...-+...+.+.|||-+.|--|.-.+...++               ...
T Consensus       612 ---------~EVaILq~----l-~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkg---------------RL~  662 (888)
T KOG4236|consen  612 ---------NEVAILQN----L-HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKG---------------RLP  662 (888)
T ss_pred             ---------HHHHHHHh----c-CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcc---------------cch
Confidence                     22222211    1 234444444444556777999999998777666654332               122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC---CcEEEEecccccccCHHHHHHHHHHHHHHHhcCHH-HHH
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQ-SLV  386 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~---g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~-~~~  386 (433)
                      +++.+++..+|..+|+|||..||+|+|+||+|||+.+.   .++||+|||+++.+.++.-+   +.++    +... -..
T Consensus       663 er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR---rsVV----GTPAYLaP  735 (888)
T KOG4236|consen  663 ERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR---RSVV----GTPAYLAP  735 (888)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh---hhhc----CCccccCH
Confidence            34556778889999999999999999999999999643   58999999999999875422   2211    2222 233


Q ss_pred             HHHHhcCCCCCCCChHHHHH
Q 013944          387 HSLTEMDVVRPGTNTLRVTM  406 (433)
Q Consensus       387 ~~l~~~g~~~~~~d~~~~~~  406 (433)
                      +.|.+-|+ ....|+|++.-
T Consensus       736 EVLrnkGy-NrSLDMWSVGV  754 (888)
T KOG4236|consen  736 EVLRNKGY-NRSLDMWSVGV  754 (888)
T ss_pred             HHHhhccc-cccccceeeeE
Confidence            44555554 44556665443

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.75  E-value=1e-18  Score=174.28  Aligned_cols=140  Identities=21%  Similarity=0.272  Sum_probs=93.0

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+. .+|+.||||+...........+   +..++.++..+                          
T Consensus        79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~---~~~E~~~l~~l--------------------------  129 (353)
T PLN00034         79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQ---ICREIEILRDV--------------------------  129 (353)
T ss_pred             hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHH---HHHHHHHHHhC--------------------------
Confidence            45799999999999995 5799999999865432211111   11111111111                          


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .+.|+.++.+.+             ......+++|||++|++|.+....            .+.        ....+..+
T Consensus       130 ~h~~iv~~~~~~-------------~~~~~~~lv~e~~~~~~L~~~~~~------------~~~--------~~~~i~~q  176 (353)
T PLN00034        130 NHPNVVKCHDMF-------------DHNGEIQVLLEFMDGGSLEGTHIA------------DEQ--------FLADVARQ  176 (353)
T ss_pred             CCCCcceeeeEe-------------ccCCeEEEEEecCCCCcccccccC------------CHH--------HHHHHHHH
Confidence            122333322222             223456899999999998653211            011        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..+|.+||+.|++|+|+||.||+++.++.++|+|||++..+.
T Consensus       177 i~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~  219 (353)
T PLN00034        177 ILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA  219 (353)
T ss_pred             HHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence            8889999999999999999999999999999999999987654

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1.5e-18  Score=171.65  Aligned_cols=145  Identities=17%  Similarity=0.186  Sum_probs=95.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+. .+|+.||||+.+..... -..+...+                                  ..
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~----------------------------------~~   50 (331)
T cd05597           6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEML-KRAETACF----------------------------------RE   50 (331)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhhHHHH----------------------------------HH
Confidence            46799999999999996 57999999997531000 00001111                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+..    .   .+-.++.++..+  ....++||||++|++|.+++......       .++.        ....+.
T Consensus        51 e~~~l~~----~---~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~-------~~~~--------~~~~~~  108 (331)
T cd05597          51 ERDVLVN----G---DRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-------LPED--------MARFYL  108 (331)
T ss_pred             HHHHHHh----C---CCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCC-------CCHH--------HHHHHH
Confidence            1111111    1   111233333322  34569999999999999988642210       1111        122355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.+||+.|++|+|+||.||+++.+|.++|+|||++..+.
T Consensus       109 ~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  153 (331)
T cd05597         109 AEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL  153 (331)
T ss_pred             HHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence            678889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=8.6e-19  Score=175.26  Aligned_cols=191  Identities=20%  Similarity=0.302  Sum_probs=125.6

Q ss_pred             CCChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 013944          150 GSPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADEL  228 (433)
Q Consensus       150 g~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~  228 (433)
                      ..+++.+|.  |...||.||||-||.|+. ++.+.||||.+.-.-.+....--.|++ +++++..+              
T Consensus        21 k~DPEklf~--dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlK-EVrFL~~l--------------   83 (948)
T KOG0577|consen   21 KDDPEKLFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILK-EVRFLRQL--------------   83 (948)
T ss_pred             cCCHHHHHH--HHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHH-HHHHHHhc--------------
Confidence            456677764  456799999999999995 688999999775433333222222222 11222222              


Q ss_pred             HHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhH
Q 013944          229 GKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLD  308 (433)
Q Consensus       229 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~  308 (433)
                                  -+.|++.+++.+-.             .+..|||||||-| +-+|++...+..       +   +..+
T Consensus        84 ------------~HPntieYkgCyLr-------------e~TaWLVMEYClG-SAsDlleVhkKp-------l---qEvE  127 (948)
T KOG0577|consen   84 ------------RHPNTIEYKGCYLR-------------EHTAWLVMEYCLG-SASDLLEVHKKP-------L---QEVE  127 (948)
T ss_pred             ------------cCCCcccccceeec-------------cchHHHHHHHHhc-cHHHHHHHHhcc-------c---hHHH
Confidence                        22244333332211             1345999999985 667776654311       0   1111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHH
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHS  388 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~  388 (433)
                           +..+..+...+|.|||+++.+|||+|.||||++..|.|||.|||.+....+...         ++-.-||-+.+.
T Consensus       128 -----IAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAns---------FvGTPywMAPEV  193 (948)
T KOG0577|consen  128 -----IAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANS---------FVGTPYWMAPEV  193 (948)
T ss_pred             -----HHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhc---------ccCCccccchhH
Confidence                 124667788899999999999999999999999999999999999998887542         222345555666


Q ss_pred             HHhc--CCCCCCCChHHHHHH
Q 013944          389 LTEM--DVVRPGTNTLRVTMD  407 (433)
Q Consensus       389 l~~~--g~~~~~~d~~~~~~~  407 (433)
                      ++.|  |-+...+|+|+++..
T Consensus       194 ILAMDEGqYdgkvDvWSLGIT  214 (948)
T KOG0577|consen  194 ILAMDEGQYDGKVDVWSLGIT  214 (948)
T ss_pred             heeccccccCCccceeeccch
Confidence            6666  566788899987743

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.75  E-value=4.9e-19  Score=160.04  Aligned_cols=157  Identities=20%  Similarity=0.245  Sum_probs=114.7

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc--
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD--  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld--  237 (433)
                      ..+|+|.|-||+||.|+. +++-.||+||.-..   +      ++.                    ..+..++.+|+.  
T Consensus        26 igr~LgkgkFG~vYlarekks~~IvalKVlfKs---q------i~~--------------------~~v~~qlrREiEIq   76 (281)
T KOG0580|consen   26 IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---Q------ILK--------------------TQVEHQLRREIEIQ   76 (281)
T ss_pred             ccccccCCccccEeEeeeccCCcEEEEeeeeHH---H------HHH--------------------hcchhhhhheeEee
Confidence            367999999999999995 68899999997521   1      000                    112233444433  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      ....+.|+.+....|-+...+             ||++||..++.+...+...+....+      +..        ....
T Consensus        77 s~L~hpnilrlY~~fhd~~ri-------------yLilEya~~gel~k~L~~~~~~~f~------e~~--------~a~Y  129 (281)
T KOG0580|consen   77 SHLRHPNILRLYGYFHDSKRI-------------YLILEYAPRGELYKDLQEGRMKRFD------EQR--------AATY  129 (281)
T ss_pred             cccCCccHHhhhhheecccee-------------EEEEEecCCchHHHHHHhccccccc------ccc--------hhHH
Confidence            456677999999888666555             9999999999999888743322111      111        1225


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLAS  373 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~  373 (433)
                      ..+++.++.|+|..+++|||+||.|+|++.+|.++++|||-+..-+...|..++..
T Consensus       130 i~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt  185 (281)
T KOG0580|consen  130 IKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGT  185 (281)
T ss_pred             HHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecc
Confidence            56778899999999999999999999999999999999999887765555555443

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.74  E-value=1.3e-17  Score=164.57  Aligned_cols=141  Identities=20%  Similarity=0.231  Sum_probs=95.5

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||+||+|+. .+|+.||||+.+...... ..+...+                                  ..|.
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~----------------------------------~~e~   46 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DEDIDWV----------------------------------QTEK   46 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHH----------------------------------HHHH
Confidence            689999999999996 578999999987432110 0011111                                  1122


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .-+.    ...+++.  ++.++..  .....++||||++|++|.+.+...+..+        +.        ....+..+
T Consensus        47 ~~~~----~~~~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~--------~~--------~~~~~~~q  104 (327)
T cd05617          47 HVFE----QASSNPF--LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLP--------EE--------HARFYAAE  104 (327)
T ss_pred             HHHH----hhcCCCC--EeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HH--------HHHHHHHH
Confidence            1111    1222222  3333332  2356799999999999988775433222        11        11235667


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      ++.++.+||+.|++|+|+||+||+++.+|.++|+|||++..
T Consensus       105 i~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~  145 (327)
T cd05617         105 ICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKE  145 (327)
T ss_pred             HHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEecccccee
Confidence            88899999999999999999999999999999999998875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.74  E-value=6.6e-18  Score=166.42  Aligned_cols=141  Identities=17%  Similarity=0.166  Sum_probs=94.3

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||+||+|+. .+|+.||+|+.+...... ..+..                                  .+..|.
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~-~~~~~----------------------------------~~~~e~   46 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDEVA----------------------------------HTLTEN   46 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH----------------------------------HHHHHH
Confidence            589999999999985 589999999986422110 00000                                  011122


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      +.+..    +. ++  .+++++..  .....++||||++|++|.+++......+        +.        ....+..+
T Consensus        47 ~~l~~----~~-hp--~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~--------~~--------~~~~~~~q  103 (325)
T cd05594          47 RVLQN----SR-HP--FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS--------ED--------RARFYGAE  103 (325)
T ss_pred             HHHHh----CC-CC--CCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCC--------HH--------HHHHHHHH
Confidence            22211    11 22  23333322  3356799999999999988776433221        11        11235567


Q ss_pred             HHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ++.++.+||+ .|++|+|+||.||+++.+|.++|+|||++...
T Consensus       104 i~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~  146 (325)
T cd05594         104 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG  146 (325)
T ss_pred             HHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence            8889999997 79999999999999999999999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.74  E-value=1.5e-18  Score=171.65  Aligned_cols=147  Identities=16%  Similarity=0.158  Sum_probs=96.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+++. .+|+.||||+....... -..+...+                                  .
T Consensus         5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~----------------------------------~   49 (331)
T cd05624           5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML-KRAETACF----------------------------------R   49 (331)
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-hhHHHHHH----------------------------------H
Confidence            346899999999999996 47899999987531000 00001111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|..-+    ... ++++  ++.++.  ......++||||++|++|.+++....+.       .++.        ....+
T Consensus        50 ~e~~~l----~~~-~~~~--i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~-------l~~~--------~~~~~  107 (331)
T cd05624          50 EERNVL----VNG-DCQW--ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDR-------LPED--------MARFY  107 (331)
T ss_pred             HHHHHH----HhC-CCCC--EeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCC-------CCHH--------HHHHH
Confidence            111111    111 1222  222222  2235669999999999999998653210       1111        12235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.+|.++|+.|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       108 ~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  154 (331)
T cd05624         108 IAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ  154 (331)
T ss_pred             HHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence            56788899999999999999999999999999999999999876643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.74  E-value=2e-17  Score=163.40  Aligned_cols=141  Identities=18%  Similarity=0.224  Sum_probs=94.8

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||.||+|+. .+|+.||||+.+...... ..++..+.                                  .|.
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~-~~~~~~~~----------------------------------~e~   46 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND-DEDIDWVQ----------------------------------TEK   46 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHH----------------------------------HHH
Confidence            589999999999996 578999999986432110 00111111                                  111


Q ss_pred             HHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .-+    ....+++  .+++++..+  ....++||||++|++|.+++...+.++        +.        ....+..+
T Consensus        47 ~il----~~~~~hp--~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~--------~~--------~~~~~~~q  104 (329)
T cd05588          47 HVF----ETASNHP--FLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLP--------EE--------HARFYSAE  104 (329)
T ss_pred             HHH----HhccCCC--CCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCC--------HH--------HHHHHHHH
Confidence            111    1111222  233333332  356699999999999988775433222        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      +..++.+||+.|++|+|+||+||+++.+|.++|+|||++..
T Consensus       105 i~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~  145 (329)
T cd05588         105 ISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE  145 (329)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccc
Confidence            88899999999999999999999999999999999999865

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.74  E-value=2.3e-17  Score=163.18  Aligned_cols=47  Identities=19%  Similarity=0.222  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..+++.++.|||+.|++|+|+||+||+++.++.++|+|||+++.+.
T Consensus       179 ~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~  225 (338)
T cd05102         179 YSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIY  225 (338)
T ss_pred             HHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccc
Confidence            45678899999999999999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.74  E-value=1.1e-18  Score=175.31  Aligned_cols=146  Identities=19%  Similarity=0.227  Sum_probs=97.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||+|+........ ..+...+                                  
T Consensus        46 ~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~----------------------------------   90 (370)
T cd05621          46 DVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSDSAFF----------------------------------   90 (370)
T ss_pred             eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHHH----------------------------------
Confidence            3456799999999999996 478999999875211000 0000011                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+    ..+. ++  .+.+++..  .....++||||++|++|.+++.... .        ++.        ....
T Consensus        91 ~~e~~i~----~~~~-hp--~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~-~--------~~~--------~~~~  146 (370)
T cd05621          91 WEERDIM----AFAN-SP--WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-V--------PEK--------WAKF  146 (370)
T ss_pred             HHHHHHH----HhCC-CC--CEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcC-C--------CHH--------HHHH
Confidence            1121111    1111 22  23333332  2356799999999999999885321 1        111        1223


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..++.+||+.|++|||+||+||+++.+|.++|+|||++..+..
T Consensus       147 ~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~  194 (370)
T cd05621         147 YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE  194 (370)
T ss_pred             HHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence            556788899999999999999999999999999999999999887643

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.74  E-value=3.2e-18  Score=168.62  Aligned_cols=145  Identities=18%  Similarity=0.133  Sum_probs=93.3

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+. .+|+.||||+.++..... ..+...+..                                  
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~l~~----------------------------------   48 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEVESLMC----------------------------------   48 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHH----------------------------------
Confidence            45799999999999985 579999999986431100 001111111                                  


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |.+-+..    .....+..+.+++.  ......++||||++|++|...+... .+        ++...        ..+.
T Consensus        49 e~~~~~~----~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~-~l--------~~~~~--------~~~~  107 (324)
T cd05589          49 EKRIFET----ANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTD-VF--------SEPRA--------VFYA  107 (324)
T ss_pred             HHHHHHh----ccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhcC-CC--------CHHHH--------HHHH
Confidence            1111100    11111112222222  2234569999999999998776421 11        11111        2245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .++..++.+||+.|++|+|+||.||+++++|.++|+|||++...
T Consensus       108 ~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589         108 ACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             HHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            66788999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.73  E-value=3.7e-17  Score=147.93  Aligned_cols=177  Identities=21%  Similarity=0.224  Sum_probs=110.1

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      ++||+|++|+||+|+..+|++||||+.+++.......+..++.   ......  ...++....         ......|.
T Consensus         3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~---------~~~~~~e~   68 (187)
T cd05119           3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTG---DYRFGR--KKSNWRYLS---------RLWAEKEF   68 (187)
T ss_pred             cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHH---HHHhcc--CCcchhhhh---------hHHHHHHH
Confidence            5799999999999997789999999998765432222211100   000000  011111111         11124566


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchh-hhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDL-ISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      +++.++...     .+.+|+++..  ...+++|||++|+.+... +...           ...      ... ..+..++
T Consensus        69 ~~l~~l~~~-----~~~~~~~~~~--~~~~lv~e~~~g~~~~~~~l~~~-----------~~~------~~~-~~~~~~~  123 (187)
T cd05119          69 RNLKRLYEA-----GVPVPKPIDL--NRHVLVMEFIGGDGIPAPRLKDV-----------RLL------EDP-EELYDQI  123 (187)
T ss_pred             HHHHHHHHc-----CCCCCceEec--CCCEEEEEEeCCCCccChhhhhh-----------hhc------ccH-HHHHHHH
Confidence            666666543     2457777653  456999999999543211 1100           000      011 1244567


Q ss_pred             HHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHh
Q 013944          322 EATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVN  379 (433)
Q Consensus       322 ~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~  379 (433)
                      ..++.++|. .|++|+|+||+||+++ ++.++++|||.+..........++.--...++
T Consensus       124 ~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~~~~~~~~~~~~~~~~  181 (187)
T cd05119         124 LELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEIDHPNAEEFLRRDVENIN  181 (187)
T ss_pred             HHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccccCcchHHHHHHHHHHHH
Confidence            788999999 9999999999999999 99999999999998887666655543333333

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.73  E-value=3.7e-18  Score=164.51  Aligned_cols=146  Identities=16%  Similarity=0.162  Sum_probs=94.0

Q ss_pred             ccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          165 VAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       165 igsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      ||+|+||+||++.. .+|+.||||+........ .....                                  .+..|.+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~----------------------------------~~~~E~~   45 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK-RKGYE----------------------------------GAMVEKR   45 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh-hHHHH----------------------------------HHHHHHH
Confidence            68999999999985 589999999875321110 00000                                  0122332


Q ss_pred             HHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      .+.++     ++++  +.+++.  ......++||||++|++|.+.+.......    ..+++..        ...+..++
T Consensus        46 il~~l-----~~~~--i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~----~~l~~~~--------~~~~~~qi  106 (280)
T cd05608          46 ILAKV-----HSRF--IVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEEN----PGFPEPR--------ACFYTAQI  106 (280)
T ss_pred             HHHhC-----CCCc--EeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccC----CCCCHHH--------HHHHHHHH
Confidence            22222     1222  222222  22355799999999999988764321100    0111111        12355678


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++.++|+.|++|+|++|.||+++.++.++|+|||++..+..
T Consensus       107 ~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  149 (280)
T cd05608         107 ISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD  149 (280)
T ss_pred             HHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence            8899999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.73  E-value=4.5e-18  Score=168.10  Aligned_cols=144  Identities=22%  Similarity=0.248  Sum_probs=97.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|+||+|+. .+|..||+|+.+..........                                     +.
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~-------------------------------------~~   51 (331)
T cd06649           9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQ-------------------------------------II   51 (331)
T ss_pred             EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHH-------------------------------------HH
Confidence            346799999999999996 4789999999876533211100                                     01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|.+.+.++    .+   -.+.+++..  .....++||||++|++|.+++......+        +.        ....+
T Consensus        52 ~E~~~l~~l----~h---~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------~~~~~  108 (331)
T cd06649          52 RELQVLHEC----NS---PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIP--------EE--------ILGKV  108 (331)
T ss_pred             HHHHHHHHC----CC---CCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCC--------HH--------HHHHH
Confidence            122222211    11   122333322  2356799999999999999886543221        11        11234


Q ss_pred             HHHHHHHHHHHHHC-CccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~-givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.++|.. +++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       109 ~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  156 (331)
T cd06649         109 SIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (331)
T ss_pred             HHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence            56678899999985 699999999999999999999999999876643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.73  E-value=4.4e-18  Score=167.18  Aligned_cols=141  Identities=18%  Similarity=0.228  Sum_probs=93.3

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||.||+|+. .+|+.||||+.++..... ..+....                                  ..|.
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~----------------------------------~~e~   46 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVECT----------------------------------MVEK   46 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHHHH----------------------------------HHHH
Confidence            589999999999996 478999999987532110 0000000                                  1111


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ..+.    ...++++  +++.+..  .....++||||++|++|.+++......+        +..        ...+..+
T Consensus        47 ~~l~----~~~~hp~--iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~--------~~~--------~~~~~~q  104 (316)
T cd05619          47 RVLS----LAWEHPF--LTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFD--------LPR--------ATFYAAE  104 (316)
T ss_pred             HHHH----hccCCCc--CcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HHH--------HHHHHHH
Confidence            1111    1111222  2233322  2345689999999999998886432221        111        1235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      +..++.+||+.|++|+|+||.||+++.++.++|+|||++..
T Consensus       105 i~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~  145 (316)
T cd05619         105 IICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKE  145 (316)
T ss_pred             HHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceE
Confidence            88899999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.73  E-value=2.7e-17  Score=160.18  Aligned_cols=158  Identities=17%  Similarity=0.175  Sum_probs=99.1

Q ss_pred             cCCccccccccceeEEEEec-----------------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHH
Q 013944          160 ISEEPVAAASFGQVYRGSTL-----------------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLR  222 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-----------------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~  222 (433)
                      ...+.||+|+||.||+|+..                 ++..||||+.++........+                      
T Consensus         8 ~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~----------------------   65 (304)
T cd05096           8 LFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARND----------------------   65 (304)
T ss_pred             eeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHH----------------------
Confidence            34568999999999999753                 234799999887643321111                      


Q ss_pred             HHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCC-
Q 013944          223 LYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSS-  299 (433)
Q Consensus       223 ~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~-  299 (433)
                                     |..|...+.++    . +++  +.+++.  ......+++|||++|++|.+++............ 
T Consensus        66 ---------------~~~E~~~l~~l----~-h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  123 (304)
T cd05096          66 ---------------FLKEVKILSRL----K-DPN--IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGN  123 (304)
T ss_pred             ---------------HHHHHHHHhhc----C-CCC--eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccc
Confidence                           12233322222    1 122  223322  2235679999999999999988643211100000 


Q ss_pred             ----chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          300 ----THLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       300 ----~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                          .......+.+.  ....+..+++.++.+||+.|++|+|+||+||+++.++.++|+|||+++.+.
T Consensus       124 ~~~~~~~~~~~~~~~--~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~  189 (304)
T cd05096         124 DAVPPAHCLPAISYS--SLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLY  189 (304)
T ss_pred             cccccccccccccHH--HHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecc
Confidence                00000011111  112356678899999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.73  E-value=1.4e-17  Score=165.17  Aligned_cols=153  Identities=20%  Similarity=0.264  Sum_probs=100.1

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...++||+|+||+||+|+. .+|+.||||+..........  ...+..++.+++.+                       
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~~~E~~~l~~l-----------------------   71 (343)
T cd07878          17 YQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIH--ARRTYRELRLLKHM-----------------------   71 (343)
T ss_pred             hhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHH--HHHHHHHHHHHHhc-----------------------
Confidence            34457899999999999985 58899999987653221110  00011111112111                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .+.|+.++.+.+......       ......+++||++ |++|.+++... ..        ++.        ....+
T Consensus        72 ---~h~~iv~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~l~~~~~~~-~l--------~~~--------~~~~i  123 (343)
T cd07878          72 ---KHENVIGLLDVFTPATSI-------ENFNEVYLVTNLM-GADLNNIVKCQ-KL--------SDE--------HVQFL  123 (343)
T ss_pred             ---CCCchhhhhhhhcccccc-------cccCcEEEEeecC-CCCHHHHHhcC-CC--------CHH--------HHHHH
Confidence               244666655544322111       1223458999987 67887776421 11        111        12345


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.+|.+||+.|++|+|+||+||+++.++.++|+|||++.....
T Consensus       124 ~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~  170 (343)
T cd07878         124 IYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD  170 (343)
T ss_pred             HHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence            67788999999999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.73  E-value=8.8e-18  Score=165.06  Aligned_cols=141  Identities=21%  Similarity=0.221  Sum_probs=93.3

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||.||+|+. .+|+.||||+.+...... ..+....                                  ..|.
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~----------------------------------~~e~   46 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-DDDVECT----------------------------------MTEK   46 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHHH----------------------------------HHHH
Confidence            589999999999996 478999999986432110 0011000                                  1111


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ..+..    ..+++  .+++++..  .....++||||++|++|.+.+......+        +.+        ...+..+
T Consensus        47 ~il~~----~~~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~--------~~~--------~~~~~~q  104 (318)
T cd05570          47 RVLAL----AGKHP--FLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFD--------EPR--------ARFYAAE  104 (318)
T ss_pred             HHHHh----ccCCC--CccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCC--------HHH--------HHHHHHH
Confidence            11111    11122  23333332  2345699999999999988876433222        111        1234567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      +..++.+||+.|++|+|++|.||+++.+|.++|+|||+++.
T Consensus       105 i~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~  145 (318)
T cd05570         105 IVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKE  145 (318)
T ss_pred             HHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCee
Confidence            88899999999999999999999999999999999998865

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=6e-18  Score=155.47  Aligned_cols=198  Identities=19%  Similarity=0.225  Sum_probs=127.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .+.|||-|.||.||..+. ++|+.||.|.. |++.+...+--..++.. .++..+                         
T Consensus        57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~-pnvfq~L~s~krvFre~-kmLcfF-------------------------  109 (449)
T KOG0664|consen   57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKM-PNVFQNLASCKRVFREI-KMLSSF-------------------------  109 (449)
T ss_pred             CCCcccccceeEEEeccCCCCccchhHhhc-chHHHHHHHHHHHHHHH-HHHHhh-------------------------
Confidence            457999999999999885 69999999976 34444333222222211 111111                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       .+.|.....+.+... ++       ++=.+.|.++|.+. .+|...+.....++.+++                +.+..
T Consensus       110 -kHdNVLSaLDILQPp-h~-------dfFqEiYV~TELmQ-SDLHKIIVSPQ~Ls~DHv----------------KVFlY  163 (449)
T KOG0664|consen  110 -RHDNVLSLLDILQPA-NP-------SFFQELYVLTELMQ-SDLHKIIVSPQALTPDHV----------------KVFVY  163 (449)
T ss_pred             -ccccHHHHHHhcCCC-Cc-------hHHHHHHHHHHHHH-hhhhheeccCCCCCcchh----------------hhhHH
Confidence             111222222222110 00       01112244555554 345554443333332222                34566


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCCCC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGT  399 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~~  399 (433)
                      +|..+|+|||+.||+|||+||||++++++..+||+|||+++..+.+++..+...++.    .|+...+.|....-....+
T Consensus       164 QILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVT----QYYRAPEiLMGaRhYs~Av  239 (449)
T KOG0664|consen  164 QILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVT----QYYRAPELLMGARRYTGAV  239 (449)
T ss_pred             HHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHH----HHhccHHHhhcchhhcCcc
Confidence            788899999999999999999999999999999999999999998888777765433    4667777776666678889


Q ss_pred             ChHHHHHHHHHHhhch
Q 013944          400 NTLRVTMDLEDALGEV  415 (433)
Q Consensus       400 d~~~~~~~l~~~l~~~  415 (433)
                      |+|+++-.+.++|++.
T Consensus       240 DiWSVGCIFaELLgRr  255 (449)
T KOG0664|consen  240 DIWSVGCIFAELLQRK  255 (449)
T ss_pred             ceehhhHHHHHHHhhh
Confidence            9998887777777644

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=1.8e-17  Score=167.02  Aligned_cols=145  Identities=20%  Similarity=0.299  Sum_probs=102.2

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...++||-|.||.|..++- .+...+|+|.++.       .|+ ++|                     .-....+.|-|.
T Consensus       632 vkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrK-------aDV-l~r---------------------nQvaHVKAERDI  682 (1034)
T KOG0608|consen  632 VKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRK-------ADV-LMR---------------------NQVAHVKAERDI  682 (1034)
T ss_pred             EEEeeecccccceeEEEeecchhhHHHHhhhHH-------HHH-Hhh---------------------hhhhhhhhhhhh
Confidence            3457899999999999984 3556678887652       121 111                     111233444444


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..||.|             -.|.+.|..+.  ...|.||+|++||++..++-..+-                ..+.+.++
T Consensus       683 LAEADn-------------~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgI----------------FeE~LARF  733 (1034)
T KOG0608|consen  683 LAEADN-------------EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI----------------FEEDLARF  733 (1034)
T ss_pred             HhhcCC-------------cceEEEEEEeccCCceEEEEeccCCccHHHHHHHhcc----------------CHHHHHHH
Confidence            555443             34556666654  456999999999999887753221                12334556


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ....+.++++++|..||+|||+||+||||+.||.|||.|||++.-+
T Consensus       734 YIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  734 YIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             HHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccc
Confidence            6667889999999999999999999999999999999999998743

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.73  E-value=2.3e-18  Score=172.99  Aligned_cols=146  Identities=21%  Similarity=0.264  Sum_probs=96.8

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||+|+....... -..+...                                  +
T Consensus        46 ~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~~~----------------------------------~   90 (371)
T cd05622          46 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDSAF----------------------------------F   90 (371)
T ss_pred             EEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHHHHH----------------------------------H
Confidence            3456899999999999996 47899999987531000 0000000                                  0


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.    .+. ++  .+++++..+  ....++||||++|++|.+++.... .+        +.        ....
T Consensus        91 ~~e~~i~~----~~~-hp--~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~-~~--------~~--------~~~~  146 (371)
T cd05622          91 WEERDIMA----FAN-SP--WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VP--------EK--------WARF  146 (371)
T ss_pred             HHHHHHHH----hCC-CC--CCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcC-CC--------HH--------HHHH
Confidence            11211111    111 12  223333322  345799999999999999875321 11        11        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       147 ~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~  194 (371)
T cd05622         147 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK  194 (371)
T ss_pred             HHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence            556788899999999999999999999999999999999999887653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=6e-18  Score=164.66  Aligned_cols=195  Identities=18%  Similarity=0.216  Sum_probs=131.3

Q ss_pred             ChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchh----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHH
Q 013944          152 PVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH----VVVRDIYILRIGLGLLQKIAKRKSDLRLYAD  226 (433)
Q Consensus       152 ~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~  226 (433)
                      +++..|..  .+.||.||||.||+|.. ++++.||+|+..-+..+    .+..|+.++.                     
T Consensus        10 ~~~~~~~~--~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls---------------------   66 (467)
T KOG0201|consen   10 DPELLYTK--LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLS---------------------   66 (467)
T ss_pred             Cccccccc--chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHH---------------------
Confidence            34444443  36899999999999995 68999999998643222    1222222221                     


Q ss_pred             HHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhh
Q 013944          227 ELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQK  306 (433)
Q Consensus       227 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~  306 (433)
                                  ..+..|+.+++..+-             ..+..+++||||.||++.+.++....++..          
T Consensus        67 ------------~~~~~~it~yygsyl-------------~g~~LwiiMey~~gGsv~~lL~~~~~~~E~----------  111 (467)
T KOG0201|consen   67 ------------QCDSPNITEYYGSYL-------------KGTKLWIIMEYCGGGSVLDLLKSGNILDEF----------  111 (467)
T ss_pred             ------------hcCcchHHhhhhhee-------------ecccHHHHHHHhcCcchhhhhccCCCCccc----------
Confidence                        112345555544331             235568999999999999998754332211          


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHH
Q 013944          307 LDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLV  386 (433)
Q Consensus       307 ~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~  386 (433)
                            -..++.+.+..++.|+|.++.+|+|+|+.||++..+|.++++|||.+.+++....+.  .    ...+....|+
T Consensus       112 ------~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr--~----tfvGTPfwMA  179 (467)
T KOG0201|consen  112 ------EIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR--K----TFVGTPFWMA  179 (467)
T ss_pred             ------eeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc--c----cccccccccc
Confidence                  112355667789999999999999999999999999999999999999998765442  1    1223455566


Q ss_pred             HHHHhcCCCCCCCChHHHHHHHHHHh-hchh
Q 013944          387 HSLTEMDVVRPGTNTLRVTMDLEDAL-GEVE  416 (433)
Q Consensus       387 ~~l~~~g~~~~~~d~~~~~~~l~~~l-~~~~  416 (433)
                      ...+...-.....|+|.++....++. |++.
T Consensus       180 PEVI~~~~Y~~KADIWSLGITaiEla~GePP  210 (467)
T KOG0201|consen  180 PEVIKQSGYDTKADIWSLGITAIELAKGEPP  210 (467)
T ss_pred             hhhhccccccchhhhhhhhHHHHHHhcCCCC
Confidence            66655434567788888876555544 5554

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.72  E-value=1.2e-17  Score=165.17  Aligned_cols=144  Identities=23%  Similarity=0.286  Sum_probs=96.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||+|+.+.........+                                     +.
T Consensus         9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~-------------------------------------~~   51 (333)
T cd06650           9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQ-------------------------------------II   51 (333)
T ss_pred             eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHH-------------------------------------HH
Confidence            356799999999999996 4789999998775433211100                                     11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|.+.+.++    . ++  ++++++..  .....++||||++|++|.+++......+        +        .....+
T Consensus        52 ~E~~~l~~l----~-h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~--------~~~~~~  108 (333)
T cd06650          52 RELQVLHEC----N-SP--YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--------E--------QILGKV  108 (333)
T ss_pred             HHHHHHHHC----C-CC--cccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCC--------H--------HHHHHH
Confidence            122222221    1 11  12222221  2346699999999999999886433221        1        111234


Q ss_pred             HHHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||. .+++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       109 ~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~  156 (333)
T cd06650         109 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  156 (333)
T ss_pred             HHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence            5567889999997 4799999999999999999999999999876643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.72  E-value=7.3e-18  Score=169.64  Aligned_cols=48  Identities=21%  Similarity=0.240  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..+++.++.+||+.|++|+|+||.||+++.++.++|+|||++..+..
T Consensus       219 ~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~  266 (375)
T cd05104         219 FSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRN  266 (375)
T ss_pred             HHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence            556788999999999999999999999999999999999999876643

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.72  E-value=2.7e-18  Score=166.14  Aligned_cols=144  Identities=17%  Similarity=0.229  Sum_probs=94.2

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||+|+.+.........                                     .
T Consensus         7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------------------~   49 (288)
T cd07871           7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPC-------------------------------------T   49 (288)
T ss_pred             ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcch-------------------------------------h
Confidence            34456899999999999996 478999999876432110000                                     0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|.+.+.+    +. ++  .+.+++..+  ....++||||++| +|.+++......       .+..        ...
T Consensus        50 ~~~E~~~l~~----l~-h~--niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~-------~~~~--------~~~  106 (288)
T cd07871          50 AIREVSLLKN----LK-HA--NIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNL-------MSMH--------NVK  106 (288)
T ss_pred             HHHHHHHHHh----CC-CC--CEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCC-------CCHH--------HHH
Confidence            0112222211    11 12  223333322  2446899999986 787776533211       0111        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       107 ~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~  153 (288)
T cd07871         107 IFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAK  153 (288)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeec
Confidence            35667888999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.72  E-value=4.9e-18  Score=166.76  Aligned_cols=142  Identities=22%  Similarity=0.260  Sum_probs=94.9

Q ss_pred             ccccccccceeEEEEe----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          163 EPVAAASFGQVYRGST----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +.||+|+||.||+++.    .+|+.||||+.+.....  ..+..                                  .+
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~----------------------------------~~   45 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK--VRDRV----------------------------------RT   45 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh--hhhHH----------------------------------HH
Confidence            4689999999999874    36899999988632111  00000                                  01


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.++    .   +-.+++++..  .....++||||++|++|.+++......+        +.        ....
T Consensus        46 ~~E~~~l~~l----~---h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~--------~~~~  102 (318)
T cd05582          46 KMERDILAEV----N---HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT--------EE--------DVKF  102 (318)
T ss_pred             HHHHHHHHhC----C---CCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCC--------HH--------HHHH
Confidence            1232222221    1   1223333332  2355699999999999988875432221        11        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.+||+.|++|+|+||.||+++.+|.++|+|||++....
T Consensus       103 ~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  149 (318)
T cd05582         103 YLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI  149 (318)
T ss_pred             HHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence            55678889999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.72  E-value=2.3e-17  Score=171.84  Aligned_cols=81  Identities=16%  Similarity=0.192  Sum_probs=62.4

Q ss_pred             eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc
Q 013944          271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ  350 (433)
Q Consensus       271 ~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~  350 (433)
                      .++||||++|++|.+++.......    ..+++.        ....+..+++.+|.|+|..|++|+|+||+||+++.++.
T Consensus       114 i~lV~Ey~~~gsL~~~l~~~~~~~----~~l~e~--------~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~  181 (496)
T PTZ00283        114 IALVLDYANAGDLRQEIKSRAKTN----RTFREH--------EAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGL  181 (496)
T ss_pred             EEEEEeCCCCCcHHHHHHHhhccC----CCCCHH--------HHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCC
Confidence            479999999999999886432110    011111        11235567888999999999999999999999999999


Q ss_pred             EEEEecccccccC
Q 013944          351 IGFLDFGLLCRME  363 (433)
Q Consensus       351 l~l~DFGl~~~l~  363 (433)
                      ++|+|||+++.+.
T Consensus       182 vkL~DFGls~~~~  194 (496)
T PTZ00283        182 VKLGDFGFSKMYA  194 (496)
T ss_pred             EEEEecccCeecc
Confidence            9999999987654

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.71  E-value=5.5e-18  Score=160.15  Aligned_cols=142  Identities=21%  Similarity=0.244  Sum_probs=95.4

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      +.||+|++|+||+|+. .+|+.||+|..+.........+                                     +.+|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~-------------------------------------~~~e   43 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAK-------------------------------------FLQE   43 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHH-------------------------------------HHHH
Confidence            3689999999999996 4899999998765433211110                                     1112


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ..-+.+    +. ++  .+++++.  ......++||||++|++|.+++......       .++..        ...+..
T Consensus        44 ~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-------~~~~~--------~~~~~~  101 (252)
T cd05084          44 ARILKQ----YS-HP--NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPR-------LKVKE--------LIQMVE  101 (252)
T ss_pred             HHHHHh----CC-CC--CcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCC-------CCHHH--------HHHHHH
Confidence            221111    11 12  2222222  2235569999999999999988643210       11111        122456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++..++.++|..|++|+|++|+||+++.++.++++|||++....
T Consensus       102 qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  145 (252)
T cd05084         102 NAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEE  145 (252)
T ss_pred             HHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccc
Confidence            78889999999999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.71  E-value=4.7e-18  Score=170.73  Aligned_cols=146  Identities=18%  Similarity=0.201  Sum_probs=96.2

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|.||+|+. .+|+.||||+.+...... ..+...                                  +
T Consensus        46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~----------------------------------~   90 (370)
T cd05596          46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RSDSAF----------------------------------F   90 (370)
T ss_pred             EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHH----------------------------------H
Confidence            3456899999999999996 478999999875311000 000000                                  0


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.    ... ++  .+++++..  .....++||||++|++|.+++.... .        ++.        ....
T Consensus        91 ~~e~~il~----~~~-h~--~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~-l--------~~~--------~~~~  146 (370)
T cd05596          91 WEERDIMA----HAN-SE--WIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYD-I--------PEK--------WARF  146 (370)
T ss_pred             HHHHHHHH----hCC-CC--CcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcC-C--------CHH--------HHHH
Confidence            11211111    111 12  22333322  2345799999999999999875321 1        111        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..+++.++.+||+.|++|+|+||.||+++.+|.++|+|||++..+..
T Consensus       147 ~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~  194 (370)
T cd05596         147 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA  194 (370)
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence            455788899999999999999999999999999999999999876643

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.71  E-value=4.9e-18  Score=165.43  Aligned_cols=146  Identities=21%  Similarity=0.274  Sum_probs=92.8

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+.+........  .                                   .
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~--~-----------------------------------~   49 (303)
T cd07869           7 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTP--F-----------------------------------T   49 (303)
T ss_pred             ceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccc--h-----------------------------------h
Confidence            33457899999999999996 48999999987632211000  0                                   0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +.+|...+.    .+.+.+-+.+..++ ......++||||++| ++.+++....+.       .++.        ....+
T Consensus        50 ~~~E~~~l~----~l~h~niv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~-------~~~~--------~~~~~  108 (303)
T cd07869          50 AIREASLLK----GLKHANIVLLHDII-HTKETLTLVFEYVHT-DLCQYMDKHPGG-------LHPE--------NVKLF  108 (303)
T ss_pred             HHHHHHHHh----hCCCCCcCeEEEEE-ecCCeEEEEEECCCc-CHHHHHHhCCCC-------CCHH--------HHHHH
Confidence            011222111    12221112222222 223566999999975 566555432110       1111        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       109 ~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  153 (303)
T cd07869         109 LFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAK  153 (303)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence            567888999999999999999999999999999999999998654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.71  E-value=6.8e-17  Score=156.02  Aligned_cols=80  Identities=25%  Similarity=0.230  Sum_probs=61.1

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      +..++||||++| +|.+++.......      .++..        ...+..+++.++.+||..|++|+|+||+||+++.+
T Consensus        82 ~~~~lv~e~~~~-~l~~~~~~~~~~~------~~~~~--------~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~  146 (290)
T cd07862          82 TKLTLVFEHVDQ-DLTTYLDKVPEPG------VPTET--------IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS  146 (290)
T ss_pred             CcEEEEEccCCC-CHHHHHHhCCCCC------CCHHH--------HHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC
Confidence            457999999985 7877775422111      11111        12356678899999999999999999999999999


Q ss_pred             CcEEEEecccccccC
Q 013944          349 GQIGFLDFGLLCRME  363 (433)
Q Consensus       349 g~l~l~DFGl~~~l~  363 (433)
                      |.++|+|||++....
T Consensus       147 ~~~kl~Dfg~~~~~~  161 (290)
T cd07862         147 GQIKLADFGLARIYS  161 (290)
T ss_pred             CCEEEccccceEecc
Confidence            999999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=4.9e-17  Score=173.23  Aligned_cols=194  Identities=18%  Similarity=0.170  Sum_probs=120.9

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhH-HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVV-VRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~-~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .+.||.|+||.|+..+. .+++.+|+|++..-  +.+ ..|-.+++.+-.++..                         .
T Consensus        80 lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~--eMlKr~~tA~F~EERDimv~-------------------------~  132 (1317)
T KOG0612|consen   80 LKVIGRGAFGEVALVRHKSTEKVYAMKILNKW--EMLKRAETACFREERDIMVF-------------------------G  132 (1317)
T ss_pred             HHHhcccccceeEEEEeeccccchhHHHhhHH--HHhhchhHHHHHHHhHHHHc-------------------------C
Confidence            46899999999999996 47889999987530  111 1122222211111100                         0


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       ..+=+..+.=.|.+..++             ||||||++||+|-.++.....++                ..+..++..
T Consensus       133 -ns~Wiv~LhyAFQD~~~L-------------YlVMdY~pGGDlltLlSk~~~~p----------------E~~ArFY~a  182 (1317)
T KOG0612|consen  133 -NSEWIVQLHYAFQDERYL-------------YLVMDYMPGGDLLTLLSKFDRLP----------------EDWARFYTA  182 (1317)
T ss_pred             -CcHHHHHHHHHhcCccce-------------EEEEecccCchHHHHHhhcCCCh----------------HHHHHHHHH
Confidence             011122333346666665             99999999999998886543221                223455666


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH--------------HHHHHHHHH-----HHhc
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ--------------FAMLASIVH-----IVNG  380 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~--------------~~~~~~~~~-----~~~~  380 (433)
                      .+..++..+|+.|+||||+||+|||++..|.|+|+|||.+-.+..+..              +.++...-.     -..=
T Consensus       183 EiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ec  262 (1317)
T KOG0612|consen  183 EIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGREC  262 (1317)
T ss_pred             HHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCcc
Confidence            677899999999999999999999999999999999998877653221              112221110     1122


Q ss_pred             CHHHHHHHHHhcCCCCCCCChHHHHHHHHHHh
Q 013944          381 DWQSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       381 d~~~~~~~l~~~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      |||+++-.+|+|=+...+.=.+++......++
T Consensus       263 DwWSlGV~~YEMlyG~TPFYadslveTY~KIm  294 (1317)
T KOG0612|consen  263 DWWSLGVFMYEMLYGETPFYADSLVETYGKIM  294 (1317)
T ss_pred             chhhhHHHHHHHHcCCCcchHHHHHHHHHHHh
Confidence            67777777777755554444444444444444

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.71  E-value=2.4e-17  Score=156.96  Aligned_cols=146  Identities=18%  Similarity=0.256  Sum_probs=97.8

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhH--HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVV--VRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~--~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...+.||+|+||+||+|...+|+.||||..+.......  ......                                  
T Consensus         3 ~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~----------------------------------   48 (265)
T cd06631           3 TKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEK----------------------------------   48 (265)
T ss_pred             cccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHH----------------------------------
Confidence            34567999999999999877899999998764322110  001111                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.++    .+ +  .+++.+..  .....+++|||++|++|.+++......+        +.        ...
T Consensus        49 ~~~e~~~l~~l----~~-~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------~~~  105 (265)
T cd06631          49 LQEEVDLLKSL----KH-V--NIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLP--------EP--------VFC  105 (265)
T ss_pred             HHHHHHHHHhc----CC-C--CEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCC--------HH--------HHH
Confidence            12222222222    11 2  22333322  2356799999999999999886432211        11        111


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..++..++.++|..|++|+|++|.||++++++.++++|||++..+
T Consensus       106 ~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631         106 KYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            24466778999999999999999999999999999999999988764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.71  E-value=4.5e-17  Score=161.00  Aligned_cols=146  Identities=14%  Similarity=0.139  Sum_probs=95.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+++. .+++.||+|+....... -......                                  +.
T Consensus         5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~----------------------------------~~   49 (332)
T cd05623           5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-KRAETAC----------------------------------FR   49 (332)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-HhhHHHH----------------------------------HH
Confidence            356899999999999996 46889999987421000 0000000                                  11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+    ... +++  .++.++..  .....++||||++|++|.+++......       .++.        ....+
T Consensus        50 ~e~~~l----~~~-~~~--~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~-------l~~~--------~~~~~  107 (332)
T cd05623          50 EERDVL----VNG-DNQ--WITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-------LPED--------MARFY  107 (332)
T ss_pred             HHHHHH----hhC-CCC--CEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCC-------CCHH--------HHHHH
Confidence            121111    111 122  23333332  235679999999999999998643211       1111        12235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++..++.++|+.|++|+|+||.||+++.++.++|+|||++..+.
T Consensus       108 ~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~  153 (332)
T cd05623         108 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM  153 (332)
T ss_pred             HHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence            5678889999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=2.4e-17  Score=159.22  Aligned_cols=146  Identities=17%  Similarity=0.126  Sum_probs=96.4

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|+||+|.. .+|+.||||+...........                                   +..+.+
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-----------------------------------~~~~~~   49 (285)
T cd05605           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG-----------------------------------EAMALN   49 (285)
T ss_pred             EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhh-----------------------------------HHHHHH
Confidence            35799999999999995 579999999876432111000                                   001122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.++    .+ ++  ++..+..  .....++||||++|++|.+.+.......      +++.        ....+.
T Consensus        50 E~~~l~~l----~h-~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~--------~~~~~~  108 (285)
T cd05605          50 EKQILEKV----NS-RF--VVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPG------FDEE--------RAVFYA  108 (285)
T ss_pred             HHHHHHhc----CC-CC--EeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCC------CCHH--------HHHHHH
Confidence            33222222    11 21  2222222  2245799999999999988775322110      1111        112355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.++|+.|++|+|++|.||+++.++.++|+|||++..+.
T Consensus       109 ~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605         109 AEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             HHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            678889999999999999999999999999999999999987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.71  E-value=8e-17  Score=159.83  Aligned_cols=143  Identities=20%  Similarity=0.215  Sum_probs=95.6

Q ss_pred             ccCCccccccccceeEEEEec--CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGSTL--DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~--~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.||+|+||+||+|+.+  +|+.||||+..+..... ..+.  .                              .-
T Consensus        20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~~~--~------------------------------~~   66 (365)
T PRK09188         20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SKPL--A------------------------------RH   66 (365)
T ss_pred             ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-ccHH--H------------------------------HH
Confidence            445678999999999999863  67888999865332100 0000  0                              00


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .+.+|.+.+.++.    + ++ .+|.++..  ...+|||||++|++|.....    .           ..    .   . 
T Consensus        67 ~~~~E~~iL~~L~----h-~~-iv~~l~~~--~~~~LVmE~~~G~~L~~~~~----~-----------~~----~---~-  115 (365)
T PRK09188         67 LAAREIRALKTVR----G-IG-VVPQLLAT--GKDGLVRGWTEGVPLHLARP----H-----------GD----P---A-  115 (365)
T ss_pred             HHHHHHHHHHhcc----C-CC-CCcEEEEc--CCcEEEEEccCCCCHHHhCc----c-----------ch----H---H-
Confidence            1233444444432    1 22 24555542  56799999999998863210    0           00    0   1 


Q ss_pred             HHHHHHHHHHHHHHCCccccCC-CCCceEEccCCcEEEEecccccccCHH
Q 013944          317 VNKGVEATLVQLLETGILHADP-HPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~Dl-hpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +..++..++.++|+.|++|||+ ||+||+++.+++++|+|||+++.+...
T Consensus       116 ~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~  165 (365)
T PRK09188        116 WFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR  165 (365)
T ss_pred             HHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence            2345678999999999999999 899999999999999999999987653

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.71  E-value=1.5e-17  Score=164.15  Aligned_cols=144  Identities=17%  Similarity=0.187  Sum_probs=92.5

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+. .+|+.||||+.+......  .+..                                  .+..
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~----------------------------------~~~~   48 (338)
T cd07859           5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV--SDAT----------------------------------RILR   48 (338)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccc--hhHH----------------------------------HHHH
Confidence            46799999999999995 589999999876322110  0000                                  0112


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      |...+.++    .+.+-+.+..++...    ....++||||++ ++|.+++......+        +.        ....
T Consensus        49 E~~~l~~l----~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~--------~~--------~~~~  107 (338)
T cd07859          49 EIKLLRLL----RHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDDLT--------PE--------HHQF  107 (338)
T ss_pred             HHHHHHhC----CCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcccCC--------HH--------HHHH
Confidence            22222221    111111121221111    123599999996 57877765432221        11        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++..+|.+||+.|++|+|+||.||+++.+|.++|+|||++...
T Consensus       108 i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859         108 FLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            5667889999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.70  E-value=7.7e-18  Score=174.82  Aligned_cols=149  Identities=16%  Similarity=0.147  Sum_probs=98.6

Q ss_pred             ccCCccccccccceeEEEEe-cC-CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LD-GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~-G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.+|.|++|.||+|.. .+ ++.||+|.........    ....                                
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~----~~~~--------------------------------  112 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQ----AAYA--------------------------------  112 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHH----HHHH--------------------------------
Confidence            44567899999999999984 34 7889999764322111    1111                                


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                        +.|...+.    .+   .+..+++++..+  ....+|||||++|++|.+.+.......    ..+++.        ..
T Consensus       113 --~~E~~~l~----~l---~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~----~~l~~~--------~~  171 (478)
T PTZ00267        113 --RSELHCLA----AC---DHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEH----LPFQEY--------EV  171 (478)
T ss_pred             --HHHHHHHH----hC---CCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhcc----CCCCHH--------HH
Confidence              12222221    12   222344444432  366799999999999998775321000    001111        11


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+..+++.+|.++|..|++|+|+||.||+++++|.++|+|||++..+..
T Consensus       172 ~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        172 GLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             HHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence            23556788899999999999999999999999999999999999987654

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.70  E-value=8.2e-18  Score=168.18  Aligned_cols=184  Identities=21%  Similarity=0.243  Sum_probs=123.7

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCch------hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLR------HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~------~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      .+.+|.|.||+||+|+.+ +|+.+|+|++.....      +.+..++.+|+                             
T Consensus        40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~-----------------------------   90 (382)
T KOG0032|consen   40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQ-----------------------------   90 (382)
T ss_pred             hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHH-----------------------------
Confidence            368999999999999964 699999998764332      12233333322                             


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                                  ++..   +.+-+.++.++. .....++|||+|+|+.|.+.+... .        +++..        .
T Consensus        91 ------------~l~~---hpniv~l~~~~e-~~~~~~lvmEL~~GGeLfd~i~~~-~--------~sE~d--------a  137 (382)
T KOG0032|consen   91 ------------QLSG---HPNIVQLKDAFE-DPDSVYLVMELCEGGELFDRIVKK-H--------YSERD--------A  137 (382)
T ss_pred             ------------hccC---CCCEEEEEEEEE-cCCeEEEEEEecCCchHHHHHHHc-c--------CCHHH--------H
Confidence                        2111   223344555553 345679999999999999988643 1        22222        2


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccC----CcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLT  390 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~----g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~  390 (433)
                      ..+.+++..++.|+|..|++|+|+||+|+|+...    +.++++|||++....+..+.       +.+.+....++....
T Consensus       138 ~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~-------~~~~Gtp~y~APEvl  210 (382)
T KOG0032|consen  138 AGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERL-------HTIVGTPEYVAPEVL  210 (382)
T ss_pred             HHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceE-------eeecCCccccCchhh
Confidence            3466778899999999999999999999999643    58999999999988772221       112233344445555


Q ss_pred             hcCCCCCCCChHHHHHHHHHHhhc
Q 013944          391 EMDVVRPGTNTLRVTMDLEDALGE  414 (433)
Q Consensus       391 ~~g~~~~~~d~~~~~~~l~~~l~~  414 (433)
                      ....+.+.+|+|+++..++-+|+.
T Consensus       211 ~~~~y~~~~DiWS~Gvi~yiLL~G  234 (382)
T KOG0032|consen  211 GGRPYGDEVDVWSIGVILYILLSG  234 (382)
T ss_pred             cCCCCCcccchhHHHHHHHHHhhC
Confidence            544556677888777777766643

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.70  E-value=5.7e-17  Score=153.18  Aligned_cols=150  Identities=21%  Similarity=0.292  Sum_probs=96.2

Q ss_pred             cCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhH-HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVV-VRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~-~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...+.||+|++|+||+|+.. +|+.|++|+......... ......+...+.++..+                       
T Consensus         3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----------------------   59 (258)
T cd06632           3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-----------------------   59 (258)
T ss_pred             cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-----------------------
Confidence            34578999999999999975 899999998754321100 00000111111111110                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .+.|+.++.+.+             ......+++|||++|++|.+++......+        +..        ...+
T Consensus        60 ---~h~~i~~~~~~~-------------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~~--------~~~~  107 (258)
T cd06632          60 ---QHPNIVQYLGTE-------------REEDNLYIFLELVPGGSLAKLLKKYGSFP--------EPV--------IRLY  107 (258)
T ss_pred             ---CCCCchheeeeE-------------ecCCeEEEEEEecCCCcHHHHHHhcCCCC--------HHH--------HHHH
Confidence               112222222211             12245699999999999999886432111        111        1124


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.++|..|++|+|++|+||+++.++.++|+|||++.....
T Consensus       108 ~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632         108 TRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            45677899999999999999999999999999999999998876543

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.70  E-value=3.1e-17  Score=158.66  Aligned_cols=146  Identities=20%  Similarity=0.202  Sum_probs=97.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      -.+.||+|++|.||+|.. .+|+.||+|+.++...... .....                                  +.
T Consensus         5 ~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~----------------------------------~~   49 (290)
T cd05580           5 FIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKL-KQVEH----------------------------------VL   49 (290)
T ss_pred             EEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh-hHHHH----------------------------------HH
Confidence            346899999999999996 4789999998763211000 00000                                  11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    . ++  .+++++..  .....+++|||++|++|.+++.....++        +.        ....+
T Consensus        50 ~e~~~l~~l----~-h~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~--------~~--------~~~~~  106 (290)
T cd05580          50 NEKRILQSI----R-HP--FLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFP--------EP--------VARFY  106 (290)
T ss_pred             HHHHHHHhC----C-CC--CccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCC--------HH--------HHHHH
Confidence            222222221    1 11  22233322  2345689999999999999886543222        11        11234


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.++.++|+.|++|+|++|.||+++.+|.++|+|||++.....
T Consensus       107 ~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  153 (290)
T cd05580         107 AAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG  153 (290)
T ss_pred             HHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence            56788899999999999999999999999999999999999887644

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.70  E-value=2.5e-17  Score=161.32  Aligned_cols=152  Identities=20%  Similarity=0.295  Sum_probs=94.6

Q ss_pred             ccccCCccccccccceeEEEEec---CCCEEEEEEcCCC-chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          157 FSFISEEPVAAASFGQVYRGSTL---DGSIVAVKVQRPN-LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       157 f~~~~~~pigsgS~gqVy~a~l~---~G~~VAVKv~~p~-~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      |++ +...||+|+||.||+|+.+   +++.||+|+.... ......+++.+++       .+                  
T Consensus         2 ~~~-~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~-------~l------------------   55 (317)
T cd07868           2 FEY-EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLR-------EL------------------   55 (317)
T ss_pred             ccc-cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHH-------hc------------------
Confidence            443 3568999999999999854   5689999987642 2222222332222       11                  


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCC-CCCCchhhhhhhHHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSV-DGSSTHLDRQKLDAK  310 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~  310 (433)
                              .+.|+.++.+            .+.. .....+++|||+++ +|.+++........ .....++        
T Consensus        56 --------~h~niv~~~~------------~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~--------  106 (317)
T cd07868          56 --------KHPNVISLQK------------VFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP--------  106 (317)
T ss_pred             --------CCCCCcceee------------eEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCC--------
Confidence                    1223322222            2211 12345899999875 67776653221100 0000111        


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEE----ccCCcEEEEecccccccC
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY----TSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv----~~~g~l~l~DFGl~~~l~  363 (433)
                      ......+..++..++.+||+.|++|+|+||.||++    +.++.++|+|||+++.+.
T Consensus       107 ~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07868         107 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence            12233467788899999999999999999999999    456799999999998664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.70  E-value=7.3e-17  Score=154.21  Aligned_cols=156  Identities=19%  Similarity=0.282  Sum_probs=101.6

Q ss_pred             ccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          157 FSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       157 f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      |.|+..++||+|++|+||+|.. .+|+.||||..+.........+.. ..                     +..+.    
T Consensus         1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~-~~---------------------~~~~~----   54 (272)
T cd06629           1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSR-QK---------------------DMVKA----   54 (272)
T ss_pred             CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchH-HH---------------------HHHHH----
Confidence            5678889999999999999985 479999999875322111000000 00                     00000    


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                        +..|...+..    +.+ +  .+++++..  .....++||||++|++|.+++......+        +.        .
T Consensus        55 --~~~e~~~l~~----l~h-~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~--------~  109 (272)
T cd06629          55 --LRSEIETLKD----LDH-L--NIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFE--------EQ--------L  109 (272)
T ss_pred             --HHHHHHHHHh----cCC-C--CcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCC--------HH--------H
Confidence              1122222221    211 2  23333322  2356799999999999999886432211        11        1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ...+..+++.++.++|+.|++|+|++|+||+++.++.++++|||++....
T Consensus       110 ~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~  159 (272)
T cd06629         110 VRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD  159 (272)
T ss_pred             HHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence            22356678889999999999999999999999999999999999987653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.70  E-value=2.9e-17  Score=158.78  Aligned_cols=148  Identities=15%  Similarity=0.120  Sum_probs=95.8

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|.. .+|+.||||...+.........-.                                   +..
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~-----------------------------------~~~   49 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESM-----------------------------------ALN   49 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHH-----------------------------------HHH
Confidence            45799999999999995 589999999876432111000000                                   011


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+.+    +.+...+.+...+ ......++||||++|++|.+++.......      +++..        ...+..+
T Consensus        50 E~~il~~----l~~~~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~l~~~~~~~------l~~~~--------~~~~~~q  110 (285)
T cd05630          50 EKQILEK----VNSRFVVSLAYAY-ETKDALCLVLTLMNGGDLKFHIYHMGEAG------FEEGR--------AVFYAAE  110 (285)
T ss_pred             HHHHHHh----CCCCCeeeeeEEE-ecCCEEEEEEEecCCCcHHHHHHHhcccC------CCHHH--------HHHHHHH
Confidence            2222211    2111112121111 12356799999999999998875432111      11111        1234567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++.++.++|+.|++|+|++|+||+++.++.++++|||++....
T Consensus       111 i~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05630         111 ICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVP  153 (285)
T ss_pred             HHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence            8889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=8.5e-17  Score=152.69  Aligned_cols=143  Identities=24%  Similarity=0.301  Sum_probs=94.1

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      ++||+|++|.||+|+. .+|+.||||+.+........ ..   +                               ++..|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~-~~---~-------------------------------~~~~e   46 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKN-QV---T-------------------------------NVKAE   46 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHH-HH---H-------------------------------HHHHH
Confidence            4799999999999985 57899999987632111000 00   0                               00011


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ...+   ....   .+..+++++..+  ....+++|||++|++|.+++......+        +..        ...+..
T Consensus        47 ~~~~---~~~~---~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~i~~  104 (260)
T cd05611          47 RAIM---MIQG---ESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLP--------EDW--------AKQYIA  104 (260)
T ss_pred             HHHH---hhcC---CCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCC--------HHH--------HHHHHH
Confidence            1000   0011   112233333322  245699999999999999886433221        111        123456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ++..+|.++|..|++|+|++|.||+++.++.++|+|||++...
T Consensus       105 qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  147 (260)
T cd05611         105 EVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG  147 (260)
T ss_pred             HHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence            7888999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.69  E-value=2.6e-17  Score=165.55  Aligned_cols=47  Identities=21%  Similarity=0.232  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.+||+.|++|+|+||.||+++.++.++|+|||++..+.
T Consensus       217 i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~  263 (374)
T cd05106         217 FSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIM  263 (374)
T ss_pred             HHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeecc
Confidence            55678899999999999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.69  E-value=4.6e-17  Score=163.45  Aligned_cols=150  Identities=23%  Similarity=0.242  Sum_probs=94.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+.........  ...-+..++.++..                          
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~~E~~~l~~--------------------------   55 (372)
T cd07853           4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLV--SCKRVFRELKMLCF--------------------------   55 (372)
T ss_pred             ccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchH--HHHHHHHHHHHHHh--------------------------
Confidence            356899999999999995 5899999998753221110  00001111111111                          


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ..+.|+.++.+.+.....        ......++||||+.+ +|.+.+.....++        +.        ....+..
T Consensus        56 l~h~niv~~~~~~~~~~~--------~~~~~~~lv~e~~~~-~l~~~~~~~~~l~--------~~--------~~~~~~~  110 (372)
T cd07853          56 FKHDNVLSALDILQPPHI--------DPFEEIYVVTELMQS-DLHKIIVSPQPLS--------SD--------HVKVFLY  110 (372)
T ss_pred             CCCCCcCCHhheecCCCc--------cccceEEEEeecccc-CHHHHHhcCCCCC--------HH--------HHHHHHH
Confidence            123344444443322110        011245899999974 6666554322111        11        1223566


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++..+|.+||+.|++|+|+||.||+++.++.++|+|||++....
T Consensus       111 qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~  154 (372)
T cd07853         111 QILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEE  154 (372)
T ss_pred             HHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence            78889999999999999999999999999999999999987553

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=4.5e-17  Score=154.63  Aligned_cols=148  Identities=18%  Similarity=0.199  Sum_probs=99.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhh-HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHV-VVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~-~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...+.||+|++|+||+|.. .+|++||+|+.+...... ....+..                                  
T Consensus         5 ~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~----------------------------------   50 (263)
T cd06625           5 RRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNA----------------------------------   50 (263)
T ss_pred             cccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHH----------------------------------
Confidence            3467899999999999985 579999999876432211 0101111                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.++    . ++++  .+++.  ......+++|||++|++|.+.+......+        +.        ...
T Consensus        51 ~~~e~~~l~~l----~-~~~i--~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~--------~~--------~~~  107 (263)
T cd06625          51 LECEIQLLKNL----Q-HERI--VQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALT--------ET--------VTR  107 (263)
T ss_pred             HHHHHHHHHhC----C-CCCe--eeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCC--------HH--------HHH
Confidence            12233222221    1 2222  22222  23356799999999999998876432221        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||+.|++|+|++|+||+++.+++++|+|||++..+..
T Consensus       108 ~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~  156 (263)
T cd06625         108 KYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT  156 (263)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence            2456678899999999999999999999999999999999999876643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.69  E-value=1.6e-16  Score=149.82  Aligned_cols=141  Identities=19%  Similarity=0.266  Sum_probs=96.8

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      +.||+|++|.||+|...+++.||+|+.+.........                                     ++.+|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~-------------------------------------~~~~e~   43 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKI-------------------------------------KFLSEA   43 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHH-------------------------------------HHHHHH
Confidence            3689999999999998889999999987654332111                                     112233


Q ss_pred             HHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ..+.++    . +++  +++++.  ......++||||++|++|.+++....+.       ..+.       .+. .+..+
T Consensus        44 ~~l~~l----~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-------~~~~-------~~~-~~~~~  101 (250)
T cd05085          44 RILKQY----D-HPN--IVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDE-------LKTK-------QLV-KFALD  101 (250)
T ss_pred             HHHHhC----C-CCC--cCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCC-------CCHH-------HHH-HHHHH
Confidence            333222    1 222  222222  2335679999999999999987543211       1111       111 23456


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++.++|..|++|+|++|+||+++.++.++++|||++...
T Consensus       102 i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~  143 (250)
T cd05085         102 AAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQE  143 (250)
T ss_pred             HHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceec
Confidence            778999999999999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.69  E-value=2.6e-16  Score=151.32  Aligned_cols=143  Identities=17%  Similarity=0.181  Sum_probs=93.1

Q ss_pred             ccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          165 VAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       165 igsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      ||+|+||+||+++. .+|+.||+|+...........+-                                   ....|..
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~-----------------------------------~~~~E~~   45 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEK-----------------------------------MALLEKE   45 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhH-----------------------------------HHHHHHH
Confidence            68999999999996 47999999987532111000000                                   0011222


Q ss_pred             HHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      .+.+    +. +++  +.+++..  .....+++|||++|++|.+.+......+            .....  ...+..++
T Consensus        46 il~~----l~-hp~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~------------~~~~~--~~~~~~qi  104 (277)
T cd05607          46 ILEK----VN-SPF--IVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERG------------LEMER--VIHYSAQI  104 (277)
T ss_pred             HHHh----cC-CCc--EEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccC------------CCHHH--HHHHHHHH
Confidence            2211    21 222  2233322  2356799999999999988775432111            11111  11245678


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++.++|+.|++|+|++|.||+++.++.++|+|||++..+.
T Consensus       105 ~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~  146 (277)
T cd05607         105 TCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELK  146 (277)
T ss_pred             HHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecC
Confidence            889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.69  E-value=1.9e-16  Score=153.30  Aligned_cols=145  Identities=21%  Similarity=0.217  Sum_probs=103.8

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.+|.|.+|.||.++++ ++...|+||+......   ..-++.                                    
T Consensus        82 lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~---~rkKl~------------------------------------  122 (459)
T KOG0610|consen   82 LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLA---SRKKLK------------------------------------  122 (459)
T ss_pred             HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHh---hhhHHH------------------------------------
Confidence            357999999999999975 5689999998632211   100011                                    


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCce--EEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKR--VLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~--~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                         ....-++.++..++-.+|..|..+.+..  +||||||+||+|..+.+...+.-      ++        ....++.+
T Consensus       123 ---Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~------fs--------e~~aRFYa  185 (459)
T KOG0610|consen  123 ---RAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKR------FS--------ESAARFYA  185 (459)
T ss_pred             ---HHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCc------cc--------hhhHHHHH
Confidence               1111122333345566788888876544  89999999999998876543211      11        12234566


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..+..+|+|||-.||+.|||||+||||..+|.|-|.||-++...
T Consensus       186 AEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  186 AEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRC  229 (459)
T ss_pred             HHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence            67888999999999999999999999999999999999987654

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.69  E-value=2.7e-17  Score=166.40  Aligned_cols=136  Identities=16%  Similarity=0.158  Sum_probs=92.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+...   ..+.+++.+++       .+                       
T Consensus        94 y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~-------~l-----------------------  140 (391)
T PHA03212         94 FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILR-------AI-----------------------  140 (391)
T ss_pred             cEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHH-------hC-----------------------
Confidence            44457899999999999995 6899999996431   12222222222       11                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                         .+.|               |.+++..  .....++|||++. ++|.+++......+        ..      . + .
T Consensus       141 ---~Hpn---------------Iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~l~--------~~------~-~-~  185 (391)
T PHA03212        141 ---NHPS---------------IIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKRNIA--------IC------D-I-L  185 (391)
T ss_pred             ---CCCC---------------CCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcCCCC--------HH------H-H-H
Confidence               1112               2222222  2345689999996 56776665432221        11      1 1 2


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..+++.+|.|+|+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       186 ~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        186 AIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence            35567888999999999999999999999999999999999998653

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.68  E-value=7e-17  Score=154.88  Aligned_cols=155  Identities=17%  Similarity=0.213  Sum_probs=96.1

Q ss_pred             CccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||.|++|.||+|+..      +++.||||+.+.........                                    
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------------------   53 (280)
T cd05049          10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARK------------------------------------   53 (280)
T ss_pred             HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHH------------------------------------
Confidence            467999999999999863      35789999876543321111                                    


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                       ++..|...+.++    .+ ++  +.+.+.  ......+++|||++|++|.+++.......................  .
T Consensus        54 -~~~~e~~~l~~l----~~-~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~--~  123 (280)
T cd05049          54 -DFEREAELLTNF----QH-EN--IVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS--Q  123 (280)
T ss_pred             -HHHHHHHHHHhc----CC-CC--chheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHH--H
Confidence             112222222222    11 11  112221  123567999999999999999875421100000000001111111  1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ...+..++..++.++|..|++|+|++|+||+++.++.++|+|||++..+
T Consensus       124 ~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~  172 (280)
T cd05049         124 LLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDV  172 (280)
T ss_pred             HHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceec
Confidence            1234566788999999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.68  E-value=1.3e-16  Score=153.01  Aligned_cols=144  Identities=19%  Similarity=0.287  Sum_probs=97.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|.. .+|+.||+|+.+........   ..+..++.++..+                          
T Consensus         9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~---~~~~~e~~~l~~l--------------------------   59 (277)
T cd06642           9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEI---EDIQQEITVLSQC--------------------------   59 (277)
T ss_pred             HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHH---HHHHHHHHHHHcC--------------------------
Confidence            45799999999999985 47889999987643322111   1111111111111                          


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .+.|+.++.+.+...             ...++||||++|++|.+++....         +.+.        ....+..+
T Consensus        60 ~h~~i~~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~~~~~~---------~~~~--------~~~~~~~~  109 (277)
T cd06642          60 DSPYITRYYGSYLKG-------------TKLWIIMEYLGGGSALDLLKPGP---------LEET--------YIATILRE  109 (277)
T ss_pred             CCCccHhhhcccccC-------------CceEEEEEccCCCcHHHHhhcCC---------CCHH--------HHHHHHHH
Confidence            233555554443322             34599999999999988875311         1111        11234567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++.++|..|++|+|++|+||+++.++.++++|||++..+..
T Consensus       110 i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06642         110 ILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             HHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccC
Confidence            78899999999999999999999999999999999999887654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.68  E-value=2.5e-17  Score=178.42  Aligned_cols=155  Identities=21%  Similarity=0.218  Sum_probs=98.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+.+......-...                             .      .+.
T Consensus         6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~-----------------------------~------rfl   50 (932)
T PRK13184          6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLK-----------------------------K------RFL   50 (932)
T ss_pred             EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHH-----------------------------H------HHH
Confidence            456899999999999995 5799999999875432210000                             0      012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|.+.+.++    .+   -.+++++..  .....+++|||++|++|.+++.......  .... ......... .+. -+
T Consensus        51 rEi~ILs~L----~H---PNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~--~l~e-~~~~~lsv~-~iL-~I  118 (932)
T PRK13184         51 REAKIAADL----IH---PGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKE--SLSK-ELAEKTSVG-AFL-SI  118 (932)
T ss_pred             HHHHHHHhC----CC---cCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhcc--ccch-hhhcccCHH-HHH-HH
Confidence            233222221    11   223333322  2356799999999999999886421100  0000 000011111 111 24


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..+++.++.++|+.|++|||+||+||+++.+|.++++|||++...
T Consensus       119 ~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i  163 (932)
T PRK13184        119 FHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFK  163 (932)
T ss_pred             HHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceec
Confidence            567888999999999999999999999999999999999999876

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.68  E-value=4.9e-16  Score=143.34  Aligned_cols=145  Identities=22%  Similarity=0.264  Sum_probs=104.3

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      ++||+|++|.||+|+. +|..|+||+..+.....-..+...                              ....+.+|.
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~------------------------------~~~~~~~E~   50 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERI------------------------------RRERTRREA   50 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHH------------------------------HHHHHHHHH
Confidence            4789999999999987 788999998776443211111100                              011224466


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVE  322 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~  322 (433)
                      +++..+.     .+++.+|.++....+..+++|||++|.+|.+++....               .    .. .-+..++.
T Consensus        51 ~~l~~l~-----~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~---------------~----~~-~~i~~~i~  105 (211)
T PRK14879         51 RIMSRAR-----KAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG---------------M----EE-LELSREIG  105 (211)
T ss_pred             HHHHHHH-----HCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc---------------H----HH-HHHHHHHH
Confidence            6665554     2457788888666778899999999999998875211               0    01 12445567


Q ss_pred             HHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          323 ATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       323 ~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .++.++|..|++|+|+||+||+++ ++.++++|||.++...+
T Consensus       106 ~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~~  146 (211)
T PRK14879        106 RLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSKD  146 (211)
T ss_pred             HHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCCCc
Confidence            789999999999999999999998 88999999999887553

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=6.2e-17  Score=159.78  Aligned_cols=79  Identities=20%  Similarity=0.219  Sum_probs=63.3

Q ss_pred             CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc
Q 013944          268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS  347 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~  347 (433)
                      ....++||||++|++|.+.+......+        +.        ....+..++..++.+||..|++|+|+||.||+++.
T Consensus        68 ~~~~~lv~e~~~~g~L~~~l~~~~~~~--------~~--------~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~  131 (330)
T cd05586          68 DSDLYLVTDYMSGGELFWHLQKEGRFS--------ED--------RAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA  131 (330)
T ss_pred             CCeEEEEEcCCCCChHHHHHHhcCCCC--------HH--------HHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC
Confidence            356799999999999988876433222        11        11235567888999999999999999999999999


Q ss_pred             CCcEEEEeccccccc
Q 013944          348 SGQIGFLDFGLLCRM  362 (433)
Q Consensus       348 ~g~l~l~DFGl~~~l  362 (433)
                      +|.++|+|||++...
T Consensus       132 ~~~~kl~Dfg~a~~~  146 (330)
T cd05586         132 TGHIALCDFGLSKAN  146 (330)
T ss_pred             CCCEEEecCCcCcCC
Confidence            999999999998753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.68  E-value=3.4e-16  Score=150.81  Aligned_cols=145  Identities=16%  Similarity=0.177  Sum_probs=95.6

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|+||.||+|+. .+|+.||||+.++.....-..+...                                   ..|.
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~-----------------------------------~~~~   45 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLA-----------------------------------LNER   45 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHH-----------------------------------HHHH
Confidence            379999999999996 5789999998865422110000000                                   0011


Q ss_pred             HHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                       .+.++   .....+-.++..+..+  ....++||||++|++|.+++.....++        +.        ....+..+
T Consensus        46 -~~~~~---~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~--------~~--------~~~~i~~q  105 (279)
T cd05633          46 -IMLSL---VSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFS--------EK--------EMRFYATE  105 (279)
T ss_pred             -HHHHH---HhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCC--------HH--------HHHHHHHH
Confidence             11111   1111222334444332  356799999999999998876432221        11        11235667


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++.++|..|++|+|+||+||+++.++.++++|||++....
T Consensus       106 i~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~  148 (279)
T cd05633         106 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (279)
T ss_pred             HHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecc
Confidence            8889999999999999999999999999999999999986553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.68  E-value=4.8e-17  Score=141.29  Aligned_cols=192  Identities=18%  Similarity=0.231  Sum_probs=128.5

Q ss_pred             CccccccccceeEEEE-ecCCCEEEEEEcCC-----CchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGS-TLDGSIVAVKVQRP-----NLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p-----~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|.+|.|++|+ ..+++.||+|..|-     ++.....+++.+++                              
T Consensus         7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllk------------------------------   56 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLK------------------------------   56 (292)
T ss_pred             HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHH------------------------------
Confidence            4679999999999999 46889999997663     45556666766666                              


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                         ...++|+.++.+.+.+...+             .||.|||+ ..|..+.....|-               ...++.+
T Consensus        57 ---elkhknivrl~dvlhsdkkl-------------tlvfe~cd-qdlkkyfdslng~---------------~d~~~~r  104 (292)
T KOG0662|consen   57 ---ELKHKNIVRLHDVLHSDKKL-------------TLVFEFCD-QDLKKYFDSLNGD---------------LDPEIVR  104 (292)
T ss_pred             ---HhhhcceeehhhhhccCcee-------------EEeHHHhh-HHHHHHHHhcCCc---------------CCHHHHH
Confidence               34677999998877655544             89999998 5666666543321               0112223


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHH--------------HHHHHHHHHHhcC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF--------------AMLASIVHIVNGD  381 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~--------------~~~~~~~~~~~~d  381 (433)
                      .+..++..++.++|+++++|||+||.|++++.+|++++.|||+++-+.-..+-              -+...-.....-|
T Consensus       105 sfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsid  184 (292)
T KOG0662|consen  105 SFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID  184 (292)
T ss_pred             HHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchH
Confidence            45556778999999999999999999999999999999999998865422210              1111112233346


Q ss_pred             HHHHHHHHHhc---CC-CCCCCChHHHHHHHHHHhhch
Q 013944          382 WQSLVHSLTEM---DV-VRPGTNTLRVTMDLEDALGEV  415 (433)
Q Consensus       382 ~~~~~~~l~~~---g~-~~~~~d~~~~~~~l~~~l~~~  415 (433)
                      .|+.+..+.++   |- +-|+.|+..--.-+-.+||.+
T Consensus       185 mwsagcifaelanagrplfpg~dvddqlkrif~~lg~p  222 (292)
T KOG0662|consen  185 MWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP  222 (292)
T ss_pred             hhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCC
Confidence            77766666554   32 345666643222333455543

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=1.6e-16  Score=150.78  Aligned_cols=144  Identities=19%  Similarity=0.200  Sum_probs=98.7

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|++|.||+|...+++.||||..+++....  .+                                     +..
T Consensus        10 i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~--~~-------------------------------------~~~   50 (261)
T cd05034          10 LERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP--EA-------------------------------------FLQ   50 (261)
T ss_pred             eeeeeccCcceEEEEEEEcCCceEEEEEecCCccCH--HH-------------------------------------HHH
Confidence            356899999999999998788999999887543210  00                                     111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +.   +..+++++..  .....+++|||++|++|.+++....+..      ++..      . . ..+.
T Consensus        51 e~~~l~~----l~---h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~------~~~~------~-~-~~~~  109 (261)
T cd05034          51 EAQIMKK----LR---HDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKK------LRLP------Q-L-VDMA  109 (261)
T ss_pred             HHHHHhh----CC---CCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCC------CCHH------H-H-HHHH
Confidence            2222211    11   1233334332  2256799999999999999886432111      1111      1 1 1245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .++..++.++|+.|++|+|++|+||++++++.++++|||.+..+..
T Consensus       110 ~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~  155 (261)
T cd05034         110 AQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIED  155 (261)
T ss_pred             HHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccc
Confidence            5677899999999999999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=5.7e-17  Score=160.10  Aligned_cols=202  Identities=16%  Similarity=0.174  Sum_probs=140.3

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchh-----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      .++.||+|-|+.|-.|+. -+|+.|||||+...-.+     .+..+.++|+                             
T Consensus        22 LekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMK-----------------------------   72 (864)
T KOG4717|consen   22 LEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMK-----------------------------   72 (864)
T ss_pred             hhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHH-----------------------------
Confidence            467899999999999984 59999999998643222     1122222222                             


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhc-cCCCCCCCCchhhhhhhHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLS-TGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                          .-.|.|++++++.+             +..++.||++|.=+||+|.|++-.. .|++                +.+
T Consensus        73 ----LVQHpNiVRLYEVi-------------DTQTKlyLiLELGD~GDl~DyImKHe~Gl~----------------E~L  119 (864)
T KOG4717|consen   73 ----LVQHPNIVRLYEVI-------------DTQTKLYLILELGDGGDLFDYIMKHEEGLN----------------EDL  119 (864)
T ss_pred             ----HhcCcCeeeeeehh-------------cccceEEEEEEecCCchHHHHHHhhhcccc----------------HHH
Confidence                11334444443332             2347789999999999999998543 2222                223


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEc-cCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhc
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~-~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~  392 (433)
                      ..-...||..++.|+|...++||||||.|+.+- .-|-+||.|||++-.+.+..+.   ....+.+   .+++.+.|+.-
T Consensus       120 a~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL---~TsCGSL---AYSAPEILLGD  193 (864)
T KOG4717|consen  120 AKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL---TTSCGSL---AYSAPEILLGD  193 (864)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchh---hcccchh---hccCchhhhcC
Confidence            344566788899999999999999999999775 5599999999999998876542   2222322   23555667666


Q ss_pred             CCCCCCCChHHHHHHHHHHh-hchhccCCCCCccccccc
Q 013944          393 DVVRPGTNTLRVTMDLEDAL-GEVEFKDGIPDVKFSRVR  430 (433)
Q Consensus       393 g~~~~~~d~~~~~~~l~~~l-~~~~~~~~~~~~~~~~~l  430 (433)
                      .+=.|.+|+|.++-.|++++ |++.|.+-.+.=++..++
T Consensus       194 sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmIm  232 (864)
T KOG4717|consen  194 SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIM  232 (864)
T ss_pred             ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhh
Confidence            67788999999999999988 677776555444444443

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=6.1e-17  Score=153.88  Aligned_cols=142  Identities=21%  Similarity=0.236  Sum_probs=96.7

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||.|++|.||+|...+++.||||..++.....  .+                                     +..|
T Consensus        11 ~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~--~~-------------------------------------~~~e   51 (261)
T cd05068          11 LRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDP--KD-------------------------------------FLAE   51 (261)
T ss_pred             EEEecccCCccEEEEEecCCeEEEEEeeCCCcccH--HH-------------------------------------HHHH
Confidence            46899999999999998778899999887542110  00                                     1112


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ...+.++    . +++  +++++.  ......+++|||++|++|.+++....+..      .+...       + ..+..
T Consensus        52 ~~~l~~l----~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~~-------~-~~~~~  110 (261)
T cd05068          52 AQIMKKL----R-HPK--LIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRA------LKLPQ-------L-IDMAA  110 (261)
T ss_pred             HHHHHHC----C-CCC--ccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCC------CCHHH-------H-HHHHH
Confidence            2222222    1 111  222222  22355699999999999999886432110      11111       1 22455


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++..++.++|+.|++|+|+||+||++++++.++|+|||++..+.
T Consensus       111 ~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068         111 QVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIK  154 (261)
T ss_pred             HHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence            67889999999999999999999999999999999999987664

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.68  E-value=5.1e-17  Score=154.32  Aligned_cols=142  Identities=20%  Similarity=0.265  Sum_probs=96.6

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|++|.||+|...++..||+|...+....     ...                                  +..|
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~-----~~~----------------------------------~~~e   51 (261)
T cd05072          11 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-----VQA----------------------------------FLEE   51 (261)
T ss_pred             eeecCCcCCceEEEEEecCCceEEEEEccCCchh-----HHH----------------------------------HHHH
Confidence            4679999999999999878899999987753221     000                                  1112


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ...+.+    +. +++  +.+++.  ......+++|||++|++|.+++....+..      .+      .. ... .+..
T Consensus        52 ~~~l~~----l~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~------~~-~~~-~~~~  110 (261)
T cd05072          52 ANLMKT----LQ-HDK--LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGK------VL------LP-KLI-DFSA  110 (261)
T ss_pred             HHHHHh----CC-CCC--eeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCC------CC------HH-HHH-HHHH
Confidence            222221    11 222  222222  22355689999999999999886432111      01      11 111 2345


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +++.++.++|..|++|+|++|.||+++.++.++++|||.+..+.
T Consensus       111 ~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  154 (261)
T cd05072         111 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE  154 (261)
T ss_pred             HHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecC
Confidence            67889999999999999999999999999999999999998664

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.68  E-value=2.2e-16  Score=154.00  Aligned_cols=141  Identities=22%  Similarity=0.219  Sum_probs=96.2

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.+|+|++|.||+|+. .+++.|++|......... ..+..                                  ++..
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~~----------------------------------~~~~   50 (305)
T cd05609           6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQIQ----------------------------------QVFV   50 (305)
T ss_pred             eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHHHH----------------------------------HHHH
Confidence            46899999999999996 478999999876432110 00000                                  0112


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.    ..   .+..+++++..+.  ...++||||++|++|.+++......+        +.        ....+.
T Consensus        51 e~~~l~----~~---~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~--------~~--------~~~~~~  107 (305)
T cd05609          51 ERDILT----FA---ENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALP--------VD--------MARMYF  107 (305)
T ss_pred             HHHHHH----hC---CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCC--------HH--------HHHHHH
Confidence            222221    11   1224556665544  34599999999999999986533221        11        111234


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC  360 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~  360 (433)
                      .+++.++.++|+.|++|+|+||+||+++.+|.++++|||+++
T Consensus       108 ~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~  149 (305)
T cd05609         108 AETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSK  149 (305)
T ss_pred             HHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCcc
Confidence            467789999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.68  E-value=1.8e-16  Score=149.64  Aligned_cols=150  Identities=19%  Similarity=0.189  Sum_probs=97.4

Q ss_pred             ccccccccceeEEEEec-C---CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          163 EPVAAASFGQVYRGSTL-D---GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~-~---G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +.||+|++|.||+|... .   +..|+||+.+......   ....+                                  
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~----------------------------------   43 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE---ERKDF----------------------------------   43 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh---HHHHH----------------------------------
Confidence            46899999999999964 3   8899999987654332   11111                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCC-CCCCCchhhhhhhHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSS-VDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      ..|...+.++    . ++  .+++++.  ......+++|||++|++|.+++....... .......++...        .
T Consensus        44 ~~e~~~l~~~----~-~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~--------~  108 (262)
T cd00192          44 LKEARVMKKL----G-HP--NVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDL--------L  108 (262)
T ss_pred             HHHHHHHhhc----C-CC--ChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHH--------H
Confidence            1122222211    1 11  1222221  12456699999999999999987531100 000001111111        2


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||..|++|+|++|+||+++.++.++|+|||.+..+..
T Consensus       109 ~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192         109 SFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             HHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            2556677899999999999999999999999999999999999987754

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.68  E-value=1.5e-15  Score=138.86  Aligned_cols=141  Identities=20%  Similarity=0.233  Sum_probs=101.4

Q ss_pred             ccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHH
Q 013944          165 VAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAAN  244 (433)
Q Consensus       165 igsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n  244 (433)
                      ||+|++|.||+|.+ +|.+|++|+..+.....-..|..+                              ....+..|.++
T Consensus         2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~------------------------------~~~~~~~E~~~   50 (199)
T TIGR03724         2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERI------------------------------RRERTRNEARL   50 (199)
T ss_pred             CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHH------------------------------HHHHHHHHHHH
Confidence            79999999999985 789999998665332110111000                              00112345666


Q ss_pred             HHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHH
Q 013944          245 ASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEAT  324 (433)
Q Consensus       245 ~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~  324 (433)
                      +..+..     .++.+|.++.......+++|||++|++|.+.+....               .        .+..++..+
T Consensus        51 l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~---------------~--------~~~~~i~~~  102 (199)
T TIGR03724        51 LSRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN---------------D--------ELLREIGRL  102 (199)
T ss_pred             HHHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH---------------H--------HHHHHHHHH
Confidence            655543     346788888777777899999999999988764210               0        234556778


Q ss_pred             HHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          325 LVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       325 l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +.++|..|++|+|+||+||+++ +++++++|||+++.....
T Consensus       103 l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~~  142 (199)
T TIGR03724       103 VGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEI  142 (199)
T ss_pred             HHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCCcH
Confidence            9999999999999999999998 899999999998876543

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.68  E-value=4e-17  Score=159.45  Aligned_cols=146  Identities=16%  Similarity=0.229  Sum_probs=93.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+++.||||+.+.........                                     .
T Consensus         8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------------------~   50 (309)
T cd07872           8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPC-------------------------------------T   50 (309)
T ss_pred             eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcch-------------------------------------h
Confidence            44567899999999999996 478999999876432211000                                     0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +..|...+.++    .+..-+.+-..+ ......++||||+++ +|.+++......       .+..        ....+
T Consensus        51 ~~~E~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~-------~~~~--------~~~~~  109 (309)
T cd07872          51 AIREVSLLKDL----KHANIVTLHDIV-HTDKSLTLVFEYLDK-DLKQYMDDCGNI-------MSMH--------NVKIF  109 (309)
T ss_pred             HHHHHHHHHhC----CCCCcceEEEEE-eeCCeEEEEEeCCCC-CHHHHHHhcCCC-------CCHH--------HHHHH
Confidence            01122222111    111111111111 123556999999986 676665432210       0111        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++..++.+||+.|++|+|+||+||+++.++.++|+|||++...
T Consensus       110 ~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  154 (309)
T cd07872         110 LYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAK  154 (309)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceec
Confidence            567888999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.68  E-value=3.6e-17  Score=163.42  Aligned_cols=150  Identities=21%  Similarity=0.225  Sum_probs=89.9

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+..........  ......++.++..+                       
T Consensus        23 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~~~E~~~l~~l-----------------------   77 (359)
T cd07876          23 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH--AKRAYRELVLLKCV-----------------------   77 (359)
T ss_pred             eEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH--HHHHHHHHHHHHhC-----------------------
Confidence            34457899999999999985 57999999987643221100  00000000001000                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .+.|+.++.+.+.....+       ......++||||++|. +.+.+..  ..+        +.        ....+
T Consensus        78 ---~h~niv~~~~~~~~~~~~-------~~~~~~~lv~e~~~~~-l~~~~~~--~~~--------~~--------~~~~~  128 (359)
T cd07876          78 ---NHKNIISLLNVFTPQKSL-------EEFQDVYLVMELMDAN-LCQVIHM--ELD--------HE--------RMSYL  128 (359)
T ss_pred             ---CCCCEeeeeeeeccCCCc-------cccceeEEEEeCCCcC-HHHHHhc--cCC--------HH--------HHHHH
Confidence               112222222111100000       0112458999999874 4443321  111        11        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..+++.+|.+||+.|++|+|+||+||+++.+|.++|+|||+++..
T Consensus       129 ~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         129 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence            567889999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.68  E-value=2.9e-16  Score=148.27  Aligned_cols=146  Identities=18%  Similarity=0.154  Sum_probs=95.1

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|+||+|+. .+|+.|++|.........  .+...                                  +..
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~----------------------------------~~~   48 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR--REREE----------------------------------AID   48 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH--HHHHH----------------------------------HHH
Confidence            46799999999999996 478999999875321110  01111                                  111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +. ++  .+.+.+..  .....+++|||++|++|.+++....+..      +++..       .. .+.
T Consensus        49 e~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~~-------~~-~i~  107 (256)
T cd08529          49 EARVLAK----LD-SS--YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRP------LPEDQ-------VW-RFF  107 (256)
T ss_pred             HHHHHHh----cC-CC--CeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCC------CCHHH-------HH-HHH
Confidence            2211111    11 11  11222211  1245699999999999999886532111      11111       11 244


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+++.++.++|..|++|+|++|.||++++++.++++|||++..+..
T Consensus       108 ~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~  153 (256)
T cd08529         108 IQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD  153 (256)
T ss_pred             HHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence            5678899999999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.68  E-value=3.8e-17  Score=167.88  Aligned_cols=151  Identities=17%  Similarity=0.193  Sum_probs=91.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||....... ....++.+++       .+                       
T Consensus        68 y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-~~~~Ei~il~-------~l-----------------------  116 (440)
T PTZ00036         68 YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ-YKNRELLIMK-------NL-----------------------  116 (440)
T ss_pred             EEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc-hHHHHHHHHH-------hc-----------------------
Confidence            34467899999999999996 5789999997653321 1122332222       11                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                         .+.|+.++.+.+.       ...+....  ...++||||++| ++.+++.......    ..++        .....
T Consensus       117 ---~h~niv~l~~~~~-------~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~----~~l~--------~~~~~  173 (440)
T PTZ00036        117 ---NHINIIFLKDYYY-------TECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNN----HALP--------LFLVK  173 (440)
T ss_pred             ---CCCCCcceeeeEe-------ecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcC----CCCC--------HHHHH
Confidence               1223322221110       00000001  123689999986 5655553211000    0011        11123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCC-cEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g-~l~l~DFGl~~~l~  363 (433)
                      .+..+++.+|.|||+.|++|||+||+||+++.++ .++|+|||+++.+.
T Consensus       174 ~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~  222 (440)
T PTZ00036        174 LYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL  222 (440)
T ss_pred             HHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence            4566788999999999999999999999998665 79999999998664

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.68  E-value=4.3e-16  Score=150.47  Aligned_cols=148  Identities=14%  Similarity=0.093  Sum_probs=96.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||+|+..+.....-. +.                                  ..+..
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~-~~----------------------------------~~~~~   49 (285)
T cd05632           5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRK-GE----------------------------------SMALN   49 (285)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhh-HH----------------------------------HHHHH
Confidence            46799999999999995 58999999987643211000 00                                  00122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+.++    .+...+.+...+ ......+++|||++|++|.+.+.......      +++.        ....+..+
T Consensus        50 E~~il~~l----~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~--------~~~~~~~q  110 (285)
T cd05632          50 EKQILEKV----NSQFVVNLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPG------FEEE--------RALFYAAE  110 (285)
T ss_pred             HHHHHHHc----CCcCceeEEEEE-ecCCEEEEEEEeccCccHHHHHHHhcCCC------CCHH--------HHHHHHHH
Confidence            33333222    122222222222 22356789999999999988775432111      1111        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++.++.++|..|++|+|+||+||+++.++.++++|||++....
T Consensus       111 l~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05632         111 ILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIP  153 (285)
T ss_pred             HHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence            8889999999999999999999999999999999999886653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.67  E-value=7.1e-16  Score=148.42  Aligned_cols=145  Identities=17%  Similarity=0.204  Sum_probs=94.1

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .||+|++|.||+|+. .+|+.||+|+..+........+..                                   +..|.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~-----------------------------------~~~~~   45 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL-----------------------------------ALNER   45 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHH-----------------------------------HHHHH
Confidence            379999999999985 578999999876532111000100                                   01111


Q ss_pred             HHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ....... .. +++  .++..+..+  ....++||||++|++|.+++......+        +..        ...+..+
T Consensus        46 ~~~~~~~-~~-~~~--~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~--------~~~--------~~~~~~q  105 (278)
T cd05606          46 IMLSLVS-TG-DCP--FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS--------EAE--------MRFYAAE  105 (278)
T ss_pred             HHHHHHH-hC-CCC--cEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCC--------HHH--------HHHHHHH
Confidence            1111111 11 122  223333322  245689999999999988875432211        111        1235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++.++.++|+.|++|+|++|.||+++.++.++++|||++..+.
T Consensus       106 l~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~  148 (278)
T cd05606         106 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (278)
T ss_pred             HHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence            7889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.67  E-value=4.4e-16  Score=147.59  Aligned_cols=147  Identities=16%  Similarity=0.180  Sum_probs=99.5

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .++||.|++|.||+|+.. +|+.||+|+........ ......+..+...++.+                          
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~~e~~~l~~l--------------------------   57 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE-KGSVRNVLNERRILQEL--------------------------   57 (258)
T ss_pred             EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc-hhHHHHHHHHHHHHHhC--------------------------
Confidence            568999999999999964 79999999886422110 00111111111112111                          


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .+.|+..+.+.+...             ...+++|||++|++|.+++......+        +..        ...+..+
T Consensus        58 ~h~~i~~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~~--------~~~~~~~  108 (258)
T cd05578          58 NHPFLVNLWYSFQDE-------------ENMYLVVDLLLGGDLRYHLSQKVKFS--------EEQ--------VKFWICE  108 (258)
T ss_pred             CCCChHHHHHhhcCC-------------CeEEEEEeCCCCCCHHHHHHhcCCcC--------HHH--------HHHHHHH
Confidence            233555555444333             33499999999999999886432211        111        1234566


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++.++|..|++|+|++|.||+++.++.++++|||.+.....
T Consensus       109 i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~  152 (258)
T cd05578         109 IVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP  152 (258)
T ss_pred             HHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence            88899999999999999999999999999999999999876644

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.67  E-value=4.1e-17  Score=155.84  Aligned_cols=143  Identities=17%  Similarity=0.175  Sum_probs=95.5

Q ss_pred             CCccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      -.+.||+|+||.||+|+++    .+..||+|+.+.+.......                                     
T Consensus         9 ~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~-------------------------------------   51 (266)
T cd05064           9 IERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRR-------------------------------------   51 (266)
T ss_pred             EeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHH-------------------------------------
Confidence            3467999999999999853    46789999987653221110                                     


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      ++..|...+.+    +.+   -.+++++..  .....++||||++|++|.+++....+.       .++..       + 
T Consensus        52 ~~~~e~~~l~~----l~h---~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------l~~~~-------~-  109 (266)
T cd05064          52 GFLAEALTLGQ----FDH---SNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQ-------LVAGQ-------L-  109 (266)
T ss_pred             HHHHHHHHHhc----CCC---CCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCC-------CCHHH-------H-
Confidence            01122222211    111   122333322  235679999999999999988643210       11111       1 


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..+..+++.++.+||+.|++|+|+||.||+++.++.++++|||.....
T Consensus       110 ~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064         110 MGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             HHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            124556788999999999999999999999999999999999986654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.67  E-value=6e-17  Score=154.22  Aligned_cols=152  Identities=22%  Similarity=0.271  Sum_probs=98.3

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      .-...||+|++|+||+|.. .+++.||+|+........-..+.                       ..++...      +
T Consensus         3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~-----------------------~~~~~~~------~   53 (267)
T cd06628           3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDR-----------------------KRSMLDA------L   53 (267)
T ss_pred             cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHH-----------------------HHHHHHH------H
Confidence            4456899999999999985 47899999987643221100000                       0000011      1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|..-+.+    +.+ +  .+++++..  .....+++|||++|++|.+++......+        +.        ....
T Consensus        54 ~~e~~~l~~----l~h-~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~--------~~~~  110 (267)
T cd06628          54 AREIALLKE----LQH-E--NIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFE--------ET--------LVRN  110 (267)
T ss_pred             HHHHHHHHh----cCC-C--CeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCcc--------HH--------HHHH
Confidence            122222222    222 2  22333322  2356689999999999999886432221        11        1122


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.++|+.|++|+|++|.||++++++.++|+|||++..+.
T Consensus       111 ~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628         111 FVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLE  157 (267)
T ss_pred             HHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence            45678889999999999999999999999999999999999987765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.67  E-value=2.1e-16  Score=150.50  Aligned_cols=149  Identities=21%  Similarity=0.293  Sum_probs=96.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHH--HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVV--RDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~--~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.||+|++|+||+|.. .+|+.||+|+.+........  .....++.++.+++.+                       
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----------------------   60 (268)
T cd06630           4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-----------------------   60 (268)
T ss_pred             ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-----------------------
Confidence            456799999999999985 68999999988643311100  0011111111111111                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .+.|+.++.+.+.+             ....+++|||++|++|.+++......+        +..        ...+
T Consensus        61 ---~h~~iv~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~~  108 (268)
T cd06630          61 ---NHPHIIRMLGATCE-------------DSHFNLFVEWMAGGSVSHLLSKYGAFK--------EAV--------IINY  108 (268)
T ss_pred             ---CCCceehhhceecc-------------CCeEEEEEeccCCCcHHHHHHHhCCCC--------HHH--------HHHH
Confidence               12233333332222             234589999999999999886433221        111        1224


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCC-cEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g-~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|++|+||+++.++ .++|+|||.+..+..
T Consensus       109 ~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~  156 (268)
T cd06630         109 TEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA  156 (268)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence            56788899999999999999999999998776 599999999877653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.67  E-value=1.8e-16  Score=149.99  Aligned_cols=81  Identities=15%  Similarity=0.150  Sum_probs=63.3

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...++||||++|++|.+++......       .+..      .  ...+..+++.++.+||+.|++|+|+||+||+++.+
T Consensus        73 ~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~------~--~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  137 (259)
T cd05037          73 DENIMVEEYVKFGPLDVFLHREKNN-------VSLH------W--KLDVAKQLASALHYLEDKKLVHGNVCGKNILVARY  137 (259)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhhccC-------CCHH------H--HHHHHHHHHHHHHHHhhCCeecccCccceEEEecC
Confidence            4569999999999999988754310       1111      1  12355678889999999999999999999999988


Q ss_pred             C-------cEEEEecccccccCH
Q 013944          349 G-------QIGFLDFGLLCRMER  364 (433)
Q Consensus       349 g-------~l~l~DFGl~~~l~~  364 (433)
                      +       .++++|||++..+..
T Consensus       138 ~~~~~~~~~~kl~Dfg~a~~~~~  160 (259)
T cd05037         138 GLNEGYVPFIKLSDPGIPITVLS  160 (259)
T ss_pred             ccccCCceeEEeCCCCccccccc
Confidence            7       799999999887543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.67  E-value=1.1e-16  Score=155.94  Aligned_cols=93  Identities=15%  Similarity=0.140  Sum_probs=65.6

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCch--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTH--LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT  346 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~  346 (433)
                      ...+++|||+++++|.+++..............  .......+..  ...+..+++.++.+||+.|++|+|+||.||+++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~qi~~al~~LH~~givH~dlkp~Nili~  171 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKD--LVSCTYQVARGMEYLASQKCIHRDLAARNVLVT  171 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHH--HHHHHHHHHHHHHHHHHCCeeecccccceEEEc
Confidence            455899999999999999876432210000000  0011111211  123566788999999999999999999999999


Q ss_pred             cCCcEEEEecccccccC
Q 013944          347 SSGQIGFLDFGLLCRME  363 (433)
Q Consensus       347 ~~g~l~l~DFGl~~~l~  363 (433)
                      .++.++|+|||.++.+.
T Consensus       172 ~~~~~kl~D~g~~~~~~  188 (304)
T cd05101         172 ENNVMKIADFGLARDVN  188 (304)
T ss_pred             CCCcEEECCCccceecc
Confidence            99999999999987664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.67  E-value=9e-17  Score=160.23  Aligned_cols=150  Identities=19%  Similarity=0.201  Sum_probs=93.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|.. .+|+.||||+..........  ......+..+++                          .
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--~~~~~~E~~~l~--------------------------~   72 (355)
T cd07874          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH--AKRAYRELVLMK--------------------------C   72 (355)
T ss_pred             EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHH--HHHHHHHHHHHH--------------------------H
Confidence            457899999999999985 47899999987643221100  000000111111                          1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ..+.|+.++.+.+......       ......++||||+++ ++.+.+...  .        ++.        ....+..
T Consensus        73 l~h~niv~~~~~~~~~~~~-------~~~~~~~lv~e~~~~-~l~~~~~~~--l--------~~~--------~~~~~~~  126 (355)
T cd07874          73 VNHKNIISLLNVFTPQKSL-------EEFQDVYLVMELMDA-NLCQVIQME--L--------DHE--------RMSYLLY  126 (355)
T ss_pred             hCCCchhceeeeeeccccc-------cccceeEEEhhhhcc-cHHHHHhhc--C--------CHH--------HHHHHHH
Confidence            1233444443332211100       111345899999986 444444211  1        111        1123556


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..+|.+||+.|++|+|+||+||+++.+|.++|+|||+++....
T Consensus       127 qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~  171 (355)
T cd07874         127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_pred             HHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence            788899999999999999999999999999999999999986543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.67  E-value=1.1e-16  Score=151.95  Aligned_cols=143  Identities=17%  Similarity=0.160  Sum_probs=96.6

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchh---hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRH---VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~---~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      -.+.||+|++|.||+|+.++++.|++|+.+.....   .+..++.+++       .+                       
T Consensus        10 ~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~-------~l-----------------------   59 (261)
T cd05148          10 LERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALK-------RL-----------------------   59 (261)
T ss_pred             HhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHh-------cC-----------------------
Confidence            35679999999999999878999999997643221   1111111111       11                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .+.|+.++.+.+             ......+++|||++|++|.+++....+..      +...+       + ..+
T Consensus        60 ---~~~~i~~~~~~~-------------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~~-------~-~~~  109 (261)
T cd05148          60 ---RHKHLISLFAVC-------------SVGEPVYIITELMEKGSLLAFLRSPEGQV------LPVAS-------L-IDM  109 (261)
T ss_pred             ---CCcchhheeeeE-------------ecCCCeEEEEeecccCCHHHHHhcCCCCC------CCHHH-------H-HHH
Confidence               112333322222             12244589999999999999986532211      11111       1 124


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++..++.+||+.|++|+|++|.||+++.++.++++|||.+..+.
T Consensus       110 ~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~  155 (261)
T cd05148         110 ACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIK  155 (261)
T ss_pred             HHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcC
Confidence            4567889999999999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.67  E-value=8e-16  Score=146.10  Aligned_cols=143  Identities=20%  Similarity=0.207  Sum_probs=97.7

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||.|++|+||+|...++..||+|..+++....   +                                    ++..|
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~---~------------------------------------~~~~E   51 (260)
T cd05070          11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP---E------------------------------------SFLEE   51 (260)
T ss_pred             hheeccccCceEEEEEecCCceeEEEEecCCCCCH---H------------------------------------HHHHH
Confidence            45799999999999998888899999987643211   0                                    01112


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      ..-+.    .+.+...+.+....  .....+++|||++|++|.+++.......      .+...       . ..+..++
T Consensus        52 ~~~l~----~l~~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~~-------~-~~~~~~l  111 (260)
T cd05070          52 AQIMK----KLRHDKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKDGEGRA------LKLPN-------L-VDMAAQV  111 (260)
T ss_pred             HHHHH----hcCCCceEEEEeEE--CCCCcEEEEEecCCCcHHHHHHhcCCCC------CCHHH-------H-HHHHHHH
Confidence            22111    22222223333322  2355799999999999999886432111      11111       1 2245567


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +.++.+||+.|++|+|++|+||+++.++.++++|||.+..+.
T Consensus       112 ~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~  153 (260)
T cd05070         112 AAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIE  153 (260)
T ss_pred             HHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeecc
Confidence            889999999999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.67  E-value=1.3e-16  Score=154.82  Aligned_cols=139  Identities=22%  Similarity=0.358  Sum_probs=92.9

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchh---hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH---VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~---~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..||+|++|+||+|+. .+|+.||||+.......   .+..++.+++       .+                        
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~-------~l------------------------   74 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMR-------DY------------------------   74 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHH-------hc------------------------
Confidence            4699999999999986 58999999986432211   1111111111       10                        


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                        .+.|+.++.+.+.             .....+++|||++|++|.+++.... .        .+..        ...+.
T Consensus        75 --~h~~iv~~~~~~~-------------~~~~~~lv~e~~~~~~L~~~~~~~~-~--------~~~~--------~~~~~  122 (292)
T cd06657          75 --QHENVVEMYNSYL-------------VGDELWVVMEFLEGGALTDIVTHTR-M--------NEEQ--------IAAVC  122 (292)
T ss_pred             --CCcchhheeeEEE-------------eCCEEEEEEecCCCCcHHHHHhcCC-C--------CHHH--------HHHHH
Confidence              1223333322221             1245699999999999988764321 1        1111        12245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .++..++.++|+.|++|+|++|.||+++.++.++++|||++..+..
T Consensus       123 ~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~  168 (292)
T cd06657         123 LAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  168 (292)
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccc
Confidence            6678899999999999999999999999999999999998876643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.67  E-value=2.6e-17  Score=166.25  Aligned_cols=192  Identities=16%  Similarity=0.198  Sum_probs=134.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchh-----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      |-....||+|.||.|..|+. .+|..||||++......     ...+++++|+                           
T Consensus        58 y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk---------------------------  110 (596)
T KOG0586|consen   58 YVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMK---------------------------  110 (596)
T ss_pred             eeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHH---------------------------
Confidence            44566899999999999995 58999999987653322     2233333333                           


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                            ..+|.|+.++.+.+.             .....+|||||+.|+.+.+++.......        +        .
T Consensus       111 ------~l~HPnIvkl~~v~~-------------t~~~lylV~eya~~ge~~~yl~~~gr~~--------e--------~  155 (596)
T KOG0586|consen  111 ------SLNHPNIVKLFSVIE-------------TEATLYLVMEYASGGELFDYLVKHGRMK--------E--------K  155 (596)
T ss_pred             ------hcCCcceeeeeeeee-------------ecceeEEEEEeccCchhHHHHHhcccch--------h--------h
Confidence                  224445544433332             2344599999999999999998654322        0        1


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhc
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~  392 (433)
                      ..+-...++..+++|+|.++|+|+|||+.|++++.+..++|+|||++..+...   .+...+.+..   .+++.+.+...
T Consensus       156 ~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~---~~lqt~cgsp---pyAaPEl~~g~  229 (596)
T KOG0586|consen  156 EARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG---LMLQTFCGSP---PYAAPELFNGK  229 (596)
T ss_pred             hhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc---ccccccCCCC---CccChHhhcCc
Confidence            11224456778999999999999999999999999999999999999998854   2333333222   33555666677


Q ss_pred             CCCCCCCChHHHHHHHHHHh-hchhcc
Q 013944          393 DVVRPGTNTLRVTMDLEDAL-GEVEFK  418 (433)
Q Consensus       393 g~~~~~~d~~~~~~~l~~~l-~~~~~~  418 (433)
                      ....+.+|+|.++..++.++ |.+.|.
T Consensus       230 ~y~gpe~D~Wslgvvly~LV~GsLPFD  256 (596)
T KOG0586|consen  230 KYDGPEVDIWSLGVVLYALVEGSLPFD  256 (596)
T ss_pred             ccCCcceehhhhhhhheeeeecccccC
Confidence            78888999999988888776 555554

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.67  E-value=1e-16  Score=152.23  Aligned_cols=143  Identities=17%  Similarity=0.192  Sum_probs=96.9

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|++|.||+|..++|+.||+|..+......  .                                     ++..|
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~--~-------------------------------------~~~~E   51 (260)
T cd05067          11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP--E-------------------------------------AFLAE   51 (260)
T ss_pred             eeeeccCccceEEeeecCCCceEEEEEecCCCCcH--H-------------------------------------HHHHH
Confidence            46799999999999998899999999877543211  0                                     01112


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      ..-+.+    +.+..-+.+...+  .....+++|||++|++|.+++....+..      .+..+        ...+..++
T Consensus        52 ~~~l~~----l~h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~------~~~~~--------~~~i~~~i  111 (260)
T cd05067          52 ANLMKQ----LQHPRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPEGIK------LTINK--------LIDMAAQI  111 (260)
T ss_pred             HHHHHh----cCCcCeeeEEEEE--ccCCcEEEEEcCCCCCHHHHHHhcCCCC------CCHHH--------HHHHHHHH
Confidence            221111    1111112222221  1245699999999999999876433211      11111        11245567


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++.+||..|++|+|++|.||+++.++.++++|||++....
T Consensus       112 ~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  153 (260)
T cd05067         112 AEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIE  153 (260)
T ss_pred             HHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence            889999999999999999999999999999999999987665

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.67  E-value=9.5e-17  Score=152.13  Aligned_cols=140  Identities=19%  Similarity=0.215  Sum_probs=94.5

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|+||.||+|+++++..+|+|..+.+....  .                                     +|.+|
T Consensus         9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~--~-------------------------------------~~~~e   49 (256)
T cd05114           9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSE--E-------------------------------------DFIEE   49 (256)
T ss_pred             eeEecCCcCceEEEEEeccCceEEEEecccCCccH--H-------------------------------------HHHHH
Confidence            45799999999999998888899999876432110  0                                     11122


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ..-+.++    . +++  +.+.+.  ......++||||++|++|.+++....+.       .+..        ....+..
T Consensus        50 ~~~l~~l----~-h~~--i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~-------~~~~--------~~~~~~~  107 (256)
T cd05114          50 AKVMMKL----S-HPK--LVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGK-------LSKD--------MLLSMCQ  107 (256)
T ss_pred             HHHHHHC----C-CCC--ceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccC-------CCHH--------HHHHHHH
Confidence            2222221    1 121  222222  2234569999999999999987643210       1111        1122455


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ++..++.++|..|++|+|++|+||+++.++.++++|||.+..+
T Consensus       108 ~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~  150 (256)
T cd05114         108 DVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYV  150 (256)
T ss_pred             HHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCcccc
Confidence            6778999999999999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.67  E-value=1.1e-16  Score=152.42  Aligned_cols=144  Identities=18%  Similarity=0.184  Sum_probs=95.8

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .-.+.||.|++|.||+|+..++..||+|+.++.....     .                                  ++.
T Consensus         9 ~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~-----~----------------------------------~~~   49 (262)
T cd05071           9 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-----E----------------------------------AFL   49 (262)
T ss_pred             eEeeecCCCCCCcEEEEEecCCceEEEEecccCccCH-----H----------------------------------HHH
Confidence            3456799999999999997666789999987532110     0                                  011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      .|...+.++    .+ ++  +.+++.. .....+++|||++|++|.+++....+..      .+...       . ..+.
T Consensus        50 ~E~~~l~~l----~~-~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~~-------~-~~~~  108 (262)
T cd05071          50 QEAQVMKKL----RH-EK--LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY------LRLPQ-------L-VDMA  108 (262)
T ss_pred             HHHHHHHhC----CC-CC--cceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccC------CCHHH-------H-HHHH
Confidence            222222221    11 11  2222221 2245689999999999999886432110      11111       1 1245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.++|+.|++|+|++|+||+++.++.++|+|||.+..+.
T Consensus       109 ~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~  153 (262)
T cd05071         109 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE  153 (262)
T ss_pred             HHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecc
Confidence            567889999999999999999999999999999999999987664

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.67  E-value=9.6e-16  Score=145.07  Aligned_cols=142  Identities=20%  Similarity=0.275  Sum_probs=95.7

Q ss_pred             ccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          165 VAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       165 igsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      ||+|++|+||+|+.. +|+.|++|+........ ......+.....++.++                          .+.
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~e~~~l~~~--------------------------~h~   53 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR-KNQVDQVLTERDILSQA--------------------------QSP   53 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhh-hhHHHHHHHHHHHHHhC--------------------------CCc
Confidence            689999999999975 69999999886532211 11111111111111111                          234


Q ss_pred             HHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEA  323 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~  323 (433)
                      |+.++.+.+...             ...+++|||++|++|.+++......+        +..        ...+..++..
T Consensus        54 ~i~~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~i~~qi~~  104 (265)
T cd05579          54 YVVKLYYSFQGK-------------KNLYLVMEYLPGGDLASLLENVGSLD--------EDV--------ARIYIAEIVL  104 (265)
T ss_pred             chhHHHHheecC-------------cEEEEEEecCCCCcHHHHHHHcCCCC--------HHH--------HHHHHHHHHH
Confidence            555554443322             34489999999999999886432211        111        1234567888


Q ss_pred             HHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          324 TLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       324 ~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +|.++|..|++|+|++|.||++++++.++++|||++...
T Consensus       105 ~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~  143 (265)
T cd05579         105 ALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVG  143 (265)
T ss_pred             HHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence            999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.67  E-value=1.3e-16  Score=155.65  Aligned_cols=92  Identities=17%  Similarity=0.109  Sum_probs=64.2

Q ss_pred             CCceEEEeeccCCCCcchhhhhccCCCCCCCCch--hhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEE
Q 013944          268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTH--LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY  345 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv  345 (433)
                      ....+++|||++|++|.+++........+.....  .....+....  ...+..++..++.+||+.|++|+|++|.||++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili  157 (303)
T cd05088          80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ--LLHFAADVARGMDYLSQKQFIHRDLAARNILV  157 (303)
T ss_pred             CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHH--HHHHHHHHHHHHHHHHhCCccccccchheEEe
Confidence            3567999999999999999875432211100000  0000011111  12355678889999999999999999999999


Q ss_pred             ccCCcEEEEecccccc
Q 013944          346 TSSGQIGFLDFGLLCR  361 (433)
Q Consensus       346 ~~~g~l~l~DFGl~~~  361 (433)
                      +.++.++|+|||++..
T Consensus       158 ~~~~~~kl~dfg~~~~  173 (303)
T cd05088         158 GENYVAKIADFGLSRG  173 (303)
T ss_pred             cCCCcEEeCccccCcc
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.67  E-value=1.2e-16  Score=159.88  Aligned_cols=151  Identities=19%  Similarity=0.214  Sum_probs=91.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+++.||||+..........  ......+..+++.+                       
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--~~~~~~E~~~l~~l-----------------------   80 (364)
T cd07875          26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH--AKRAYRELVLMKCV-----------------------   80 (364)
T ss_pred             eeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchh--HHHHHHHHHHHHhc-----------------------
Confidence            33457899999999999985 57899999987643221100  00000000111110                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .+.|+..+.+.+.....       .......++||||+++ .+.+.+...  .+        ..       . ...+
T Consensus        81 ---~h~~ii~~~~~~~~~~~-------~~~~~~~~lv~e~~~~-~l~~~~~~~--~~--------~~-------~-~~~~  131 (364)
T cd07875          81 ---NHKNIIGLLNVFTPQKS-------LEEFQDVYIVMELMDA-NLCQVIQME--LD--------HE-------R-MSYL  131 (364)
T ss_pred             ---CCCCccccceeeccccc-------ccccCeEEEEEeCCCC-CHHHHHHhc--CC--------HH-------H-HHHH
Confidence               12233222221111100       0111345899999986 555544311  11        11       1 1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++..+|.+||+.|++|+|+||+||+++.++.++|+|||+++...
T Consensus       132 ~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  177 (364)
T ss_pred             HHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence            5678889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.67  E-value=1.5e-16  Score=152.19  Aligned_cols=150  Identities=14%  Similarity=0.143  Sum_probs=100.4

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      .-.++||+|++|+||+|+. .+|+.||+|+.......... ....+..+..++..+.                       
T Consensus         4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~-~~~~~~~e~~~~~~l~-----------------------   59 (280)
T cd05581           4 KFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEK-KVKYVKIEKEVLTRLN-----------------------   59 (280)
T ss_pred             eEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchH-HHHHHHHHHHHHHhcc-----------------------
Confidence            3456899999999999996 48999999997642111000 0011111111111110                       


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                        .+.|+.++.+.+.+.             +..+++|||++|++|.+++......+        ...        ...+.
T Consensus        60 --~~~~i~~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~~--------~~~i~  108 (280)
T cd05581          60 --GHPGIIKLYYTFQDE-------------ENLYFVLEYAPNGELLQYIRKYGSLD--------EKC--------TRFYA  108 (280)
T ss_pred             --cCCCchhHHHHhcCC-------------ceEEEEEcCCCCCcHHHHHHHcCCCC--------HHH--------HHHHH
Confidence              133455554444332             34589999999999999886543221        111        12355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .++..++.+||+.|++|+|++|+||+++.+|+++++|||++..+..
T Consensus       109 ~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581         109 AEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             HHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            6788899999999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PTZ00284 protein kinase; Provisional

Probab=99.67  E-value=4.3e-16  Score=161.34  Aligned_cols=145  Identities=20%  Similarity=0.275  Sum_probs=89.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||.|+||.||+|+. .+|+.||||+.+....  ...+.                                     .
T Consensus       133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~~~-------------------------------------~  173 (467)
T PTZ00284        133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTRDA-------------------------------------K  173 (467)
T ss_pred             EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHHHH-------------------------------------H
Confidence            346899999999999985 5789999999863211  01110                                     0


Q ss_pred             HHHHHHHHHHHh--cCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQES--HSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~--~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+++..  ......+.+...+..-....++|||++ |+.|.+++.....++        +.        ....+
T Consensus       174 ~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~--------~~--------~~~~i  236 (467)
T PTZ00284        174 IEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFS--------HR--------HLAQI  236 (467)
T ss_pred             HHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCC--------HH--------HHHHH
Confidence            111111111110  001111222222322234578999988 667777765432221        11        11235


Q ss_pred             HHHHHHHHHHHHH-CCccccCCCCCceEEccCC----------------cEEEEecccccc
Q 013944          318 NKGVEATLVQLLE-TGILHADPHPGNLRYTSSG----------------QIGFLDFGLLCR  361 (433)
Q Consensus       318 ~~~i~~~l~~lh~-~givH~DlhpgNilv~~~g----------------~l~l~DFGl~~~  361 (433)
                      ..++..+|.|||. .||+|||+||+|||++.++                .++|+|||.+..
T Consensus       237 ~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~  297 (467)
T PTZ00284        237 IFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD  297 (467)
T ss_pred             HHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence            6678889999998 5999999999999998765                499999997654

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.67  E-value=1.8e-16  Score=150.10  Aligned_cols=173  Identities=20%  Similarity=0.128  Sum_probs=107.4

Q ss_pred             ccccccccceeEEEEec--CC--CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          163 EPVAAASFGQVYRGSTL--DG--SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~--~G--~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +.||+|++|.||+|.+.  +|  ..||||+.+++....   ..+.+                                  
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~----------------------------------   43 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSD---IMDDF----------------------------------   43 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHH---HHHHH----------------------------------
Confidence            36899999999999863  33  369999988754421   11111                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ..|...+.++    .+..-+.+......  ...+++|||++|++|.+++......      .++...       . ..+.
T Consensus        44 ~~e~~~l~~l----~h~~iv~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~------~~~~~~-------~-~~~~  103 (257)
T cd05040          44 LKEAAIMHSL----DHENLIRLYGVVLT--HPLMMVTELAPLGSLLDRLRKDALG------HFLIST-------L-CDYA  103 (257)
T ss_pred             HHHHHHHhhc----CCCCccceeEEEcC--CeEEEEEEecCCCcHHHHHHhcccc------cCcHHH-------H-HHHH
Confidence            1122222111    11111222222222  5669999999999999988643210      011111       1 1245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH----------------HHHHHHHHHHHhcCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ----------------FAMLASIVHIVNGDW  382 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~----------------~~~~~~~~~~~~~d~  382 (433)
                      .++..++.++|..|++|+|+||+||+++.++.++++|||++..+.....                .............|.
T Consensus       104 ~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di  183 (257)
T cd05040         104 VQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDV  183 (257)
T ss_pred             HHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhh
Confidence            5678899999999999999999999999999999999999877643211                011111111234688


Q ss_pred             HHHHHHHHhc
Q 013944          383 QSLVHSLTEM  392 (433)
Q Consensus       383 ~~~~~~l~~~  392 (433)
                      ++++..+++|
T Consensus       184 ~slG~~l~el  193 (257)
T cd05040         184 WMFGVTLWEM  193 (257)
T ss_pred             HHHHHHHHHH
Confidence            8888777776

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.66  E-value=3.9e-16  Score=150.45  Aligned_cols=143  Identities=21%  Similarity=0.322  Sum_probs=93.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchh-----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|++|.||+|+. .+|+.||+|+.+.....     ....++.+++                             
T Consensus         4 ~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~-----------------------------   54 (288)
T cd07863           4 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLK-----------------------------   54 (288)
T ss_pred             EeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHH-----------------------------
Confidence            346799999999999996 47999999987643211     1112222111                             


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc-------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhh
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY-------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKL  307 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~  307 (433)
                                  ++. .+. ++  .+.+++..       .....+++|||+++ +|.+++.......      +++.   
T Consensus        55 ------------~l~-~~~-h~--ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~------~~~~---  108 (288)
T cd07863          55 ------------RLE-AFD-HP--NIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPG------LPAE---  108 (288)
T ss_pred             ------------Hhh-hcC-CC--CeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCC------CCHH---
Confidence                        111 011 11  12222221       12345899999986 7777765322110      1111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                           ....+..++..++.++|+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       109 -----~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863         109 -----TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             -----HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence                 112356678889999999999999999999999999999999999987664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PHA02988 hypothetical protein; Provisional

Probab=99.66  E-value=2e-16  Score=152.92  Aligned_cols=145  Identities=12%  Similarity=0.100  Sum_probs=97.0

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .....+++|++|.||+|.. +|+.||||+.+...... ..-+..                                  +.
T Consensus        23 ~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~-~~~~~~----------------------------------~~   66 (283)
T PHA02988         23 YTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGH-KVLIDI----------------------------------TE   66 (283)
T ss_pred             CCCeEEeeCCceEEEEEEE-CCEEEEEEecccccccc-HHHHHH----------------------------------HH
Confidence            3445799999999999987 89999999886532111 000011                                  12


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc------CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL------SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      +|...+.++    .+ +  .+.+++..+      ....+++|||++|++|.+++......+        ....       
T Consensus        67 ~E~~~l~~l----~h-~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~--------~~~~-------  124 (283)
T PHA02988         67 NEIKNLRRI----DS-N--NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLS--------FKTK-------  124 (283)
T ss_pred             HHHHHHHhc----CC-C--CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCC--------hhHH-------
Confidence            233333332    11 1  233333211      235689999999999999986543221        1111       


Q ss_pred             HHHHHHHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                       ..+..+++.++.++|. .+++|+|++|.||+++.+|.++++|||++..+.
T Consensus       125 -~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~  174 (283)
T PHA02988        125 -LDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILS  174 (283)
T ss_pred             -HHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence             1245567789999998 599999999999999999999999999987543

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.66  E-value=6.2e-17  Score=151.36  Aligned_cols=201  Identities=16%  Similarity=0.222  Sum_probs=132.1

Q ss_pred             hhhhccccCCccccccccceeEEEEec---C--CCEEEEEEcCC-----CchhhHHHHHHHHHHHHHHHHHHHhhcCCHH
Q 013944          153 VESFFSFISEEPVAAASFGQVYRGSTL---D--GSIVAVKVQRP-----NLRHVVVRDIYILRIGLGLLQKIAKRKSDLR  222 (433)
Q Consensus       153 ~~~~f~~~~~~pigsgS~gqVy~a~l~---~--G~~VAVKv~~p-----~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~  222 (433)
                      .+..|.|-....||+|.||.||+|+-+   +  ...+|||..+-     |+..+..+|+.++|.                
T Consensus        20 ve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~RE----------------   83 (438)
T KOG0666|consen   20 VEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRE----------------   83 (438)
T ss_pred             HHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHH----------------
Confidence            456677777778999999999999643   2  23688886553     455555666655552                


Q ss_pred             HHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchh
Q 013944          223 LYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHL  302 (433)
Q Consensus       223 ~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~  302 (433)
                                       ..+.|+..+.+.|-.            .....+|+.||.+ -+|...++..+...        
T Consensus        84 -----------------l~h~nvi~Lv~Vfl~------------~d~~v~l~fdYAE-hDL~~II~fHr~~~--------  125 (438)
T KOG0666|consen   84 -----------------LKHPNVISLVKVFLS------------HDKKVWLLFDYAE-HDLWHIIKFHRASK--------  125 (438)
T ss_pred             -----------------hcCCcchhHHHHHhc------------cCceEEEEehhhh-hhHHHHHHHhccch--------
Confidence                             234466665554432            2234489999998 46777776543211        


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC----CcEEEEecccccccCHHHHHHHHHHHHHHH
Q 013944          303 DRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERKHQFAMLASIVHIV  378 (433)
Q Consensus       303 ~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~----g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~  378 (433)
                       .  ....+.+.+.+.-++..++.|||++-++||||||.|||++.+    |++||.|+|+++.+...-+.- .+ .-.++
T Consensus       126 -~--~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl-~s-~d~VV  200 (438)
T KOG0666|consen  126 -A--KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPL-AS-LDPVV  200 (438)
T ss_pred             -h--ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhcccccc-cc-CCceE
Confidence             0  012233445566678889999999999999999999999877    999999999999876533220 00 00111


Q ss_pred             hcCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHh
Q 013944          379 NGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       379 ~~d~~~~~~~l~~~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      -.=|+.+.+.|....-.++.+|+|+++=.+.++|
T Consensus       201 VTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElL  234 (438)
T KOG0666|consen  201 VTIWYRAPELLLGARHYTKAIDVWAIGCIFAELL  234 (438)
T ss_pred             EEEEecChHHhcccccccchhhhHHHHHHHHHHH
Confidence            2236677777777777788888885444443333

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.66  E-value=3.1e-16  Score=148.51  Aligned_cols=145  Identities=19%  Similarity=0.136  Sum_probs=96.5

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|++|.||+|.. .|+.||||..+.....     ..-+                                  ..
T Consensus        10 ~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~~-----~~~~----------------------------------~~   49 (256)
T cd05039          10 LGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDSTA-----AQAF----------------------------------LA   49 (256)
T ss_pred             ceeeeecCCCceEEEEEe-cCcEEEEEEeccchhH-----HHHH----------------------------------HH
Confidence            356899999999999986 5899999988654320     0000                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+.+    +.+..-+.+...+. .....+++|||++|++|.+++.......      .++..        ...+..+
T Consensus        50 e~~~l~~----l~~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~------~~~~~--------~~~~~~q  110 (256)
T cd05039          50 EASVMTT----LRHPNLVQLLGVVL-QGNPLYIVTEYMAKGSLVDYLRSRGRAV------ITLAQ--------QLGFALD  110 (256)
T ss_pred             HHHHHHh----cCCcceeeeEEEEc-CCCCeEEEEEecCCCcHHHHHHhcCCCC------CCHHH--------HHHHHHH
Confidence            2111111    11111111222221 2467799999999999999886432100      11111        1234556


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++.++|..|++|+|++|+||+++.+|.++++|||.+.....
T Consensus       111 i~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~  154 (256)
T cd05039         111 VCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQ  154 (256)
T ss_pred             HHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccc
Confidence            78899999999999999999999999999999999999887643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.66  E-value=5.1e-17  Score=161.32  Aligned_cols=196  Identities=19%  Similarity=0.189  Sum_probs=130.3

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCc-hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL-RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~-~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .+.+|.|+||.++..+. .++..+|+|.++-.- .+... +  ....++.++.++                         
T Consensus         9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r-~--~A~~E~~lis~~-------------------------   60 (426)
T KOG0589|consen    9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER-R--SAIQEMDLLSKL-------------------------   60 (426)
T ss_pred             hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhh-H--HHHHHHHHHHhc-------------------------
Confidence            45799999999998885 478899999765321 11111 1  111111222221                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       .+.|++.+.+.+....            .-.+|||+||+||++.+.+...++.-      ++++.       +.. ...
T Consensus        61 -~hP~iv~y~ds~~~~~------------~~l~Ivm~Y~eGg~l~~~i~~~k~~~------f~E~~-------i~~-~~~  113 (426)
T KOG0589|consen   61 -LHPNIVEYKDSFEEDG------------QLLCIVMEYCEGGDLAQLIKEQKGVL------FPEER-------ILK-WFV  113 (426)
T ss_pred             -cCCCeeeeccchhcCC------------ceEEEEEeecCCCCHHHHHHHHhhcc------ccHHH-------HHH-HHH
Confidence             2334444443332222            22599999999999999987655322      22322       222 334


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHH-------------HHHHHHHHHHhcCHHHHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF-------------AMLASIVHIVNGDWQSLV  386 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~-------------~~~~~~~~~~~~d~~~~~  386 (433)
                      ++..++.|||+.+++|||+|+.||+++.++.|+|.|||+++.+.++...             .++.-+-.-...|.|+++
T Consensus       114 Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLG  193 (426)
T KOG0589|consen  114 QILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLG  193 (426)
T ss_pred             HHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhc
Confidence            5678999999999999999999999999999999999999999887521             122222224467999999


Q ss_pred             HHHHhcCCCCCCCChHHHHHHHHHHh
Q 013944          387 HSLTEMDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       387 ~~l~~~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      ..+++|..+.+..+.......+.+++
T Consensus       194 C~~yEm~~lk~aF~a~~m~~Li~ki~  219 (426)
T KOG0589|consen  194 CCLYEMCTLKPAFKASNMSELILKIN  219 (426)
T ss_pred             chHHHHHhcccccCccchHHHHHHHh
Confidence            99999999888777665555444444

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.66  E-value=8e-16  Score=146.22  Aligned_cols=142  Identities=18%  Similarity=0.172  Sum_probs=96.5

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLR--HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~--~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+.||+|++|+||+|...++..||+|..+++..  +.+                                         
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~-----------------------------------------   48 (260)
T cd05069          10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAF-----------------------------------------   48 (260)
T ss_pred             eeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHH-----------------------------------------
Confidence            3467999999999999987777899998876421  111                                         


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ..|.+.+.    .+.+..-+.+...+  .....+++|||++|++|.+++....+..      .+      ... . ..+.
T Consensus        49 ~~E~~~l~----~l~h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~------~~------~~~-~-~~~~  108 (260)
T cd05069          49 LQEAQIMK----KLRHDKLVPLYAVV--SEEPIYIVTEFMGKGSLLDFLKEGDGKY------LK------LPQ-L-VDMA  108 (260)
T ss_pred             HHHHHHHH----hCCCCCeeeEEEEE--cCCCcEEEEEcCCCCCHHHHHhhCCCCC------CC------HHH-H-HHHH
Confidence            11222211    12222222222222  2345689999999999999886432110      01      111 1 1245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.++|+.|++|+|++|+||++++++.++|+|||.+..+.
T Consensus       109 ~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~  153 (260)
T cd05069         109 AQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIE  153 (260)
T ss_pred             HHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEcc
Confidence            567889999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.66  E-value=3.5e-16  Score=164.01  Aligned_cols=152  Identities=18%  Similarity=0.228  Sum_probs=102.3

Q ss_pred             CCccccccccceeEEEEecCC-CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTLDG-SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G-~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .++-|++|+|++||.|....+ .++|+|.+.-.-    +.+++.++.++.+++.+.+                       
T Consensus        41 V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d----e~~L~~v~~EI~~MK~L~g-----------------------   93 (738)
T KOG1989|consen   41 VEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND----EEALNAVKREIDIMKLLSG-----------------------   93 (738)
T ss_pred             EEEEEccCCcEEEEEEEecCCCceeeeeeeecCC----HHHHHHHHHHHHHHHHhcC-----------------------
Confidence            356799999999999997544 999999876542    2345555555555555432                       


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                        |+|++.|.+.......-       .- .-+..|.||||.|+.|-|++.......      +.+.+       ++. |.
T Consensus        94 --h~nIV~yidss~~~~~~-------~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~------lte~e-------VLk-If  150 (738)
T KOG1989|consen   94 --HKNIVSYIDSSAINRSS-------NNGVWEVLLLMEYCKGGSLVDFMNTRLQTR------LTEDE-------VLK-IF  150 (738)
T ss_pred             --CCceeeEeccccccccC-------CCceeEEEeehhhccCCcHHHHHHHHHhcc------CChHH-------HHH-HH
Confidence              33555544421100000       00 023479999999999999997432110      12222       222 55


Q ss_pred             HHHHHHHHHHHHCC--ccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETG--ILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~g--ivH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++.++.+||...  ++|||||-+|||+..+|..||||||.+...
T Consensus       151 ~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~  196 (738)
T KOG1989|consen  151 YDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK  196 (738)
T ss_pred             HHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence            66888999999987  999999999999999999999999988754

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.66  E-value=1.5e-16  Score=151.83  Aligned_cols=156  Identities=22%  Similarity=0.350  Sum_probs=98.4

Q ss_pred             hhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 013944          153 VESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR--HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELG  229 (433)
Q Consensus       153 ~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~--~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~  229 (433)
                      +...|..  .+.||+|++|+||+|.. .+++.||+|+......  ..+..++.+++       ++               
T Consensus         4 ~~~~y~~--~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~-------~~---------------   59 (272)
T cd06637           4 PAGIFEL--VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK-------KY---------------   59 (272)
T ss_pred             hhhhhhH--HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHH-------Hh---------------
Confidence            4444443  45799999999999996 4789999998753211  11222221111       00               


Q ss_pred             HHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          230 KGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       230 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                                ..+.|+.++.+.+....       ........+++|||++|++|.+++.......      .++.     
T Consensus        60 ----------~~h~~i~~~~~~~~~~~-------~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~------l~~~-----  111 (272)
T cd06637          60 ----------SHHRNIATYYGAFIKKN-------PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT------LKEE-----  111 (272)
T ss_pred             ----------cCCCCeeeEeeEEeecC-------CCCCCcEEEEEEEcCCCCcHHHHHHhccCCC------CCHH-----
Confidence                      01112222211110000       0001234689999999999999886532111      1111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                         ....+..+++.++.+||..|++|+|+||+||+++.++.++|+|||++..+.
T Consensus       112 ---~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~  162 (272)
T cd06637         112 ---WIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  162 (272)
T ss_pred             ---HHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence               122356678889999999999999999999999999999999999987654

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.66  E-value=2.4e-16  Score=149.79  Aligned_cols=143  Identities=18%  Similarity=0.189  Sum_probs=95.3

Q ss_pred             ccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          165 VAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       165 igsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      ||.|++|.||+|+. .+|+.||+|+..+........ ...                                  +.+|..
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~-~~~----------------------------------~~~e~~   45 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQ-QEH----------------------------------IFSEKE   45 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhH-HHH----------------------------------HHHHHH
Confidence            68999999999996 468999999886432111000 000                                  111222


Q ss_pred             HHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      .+    ..+.+ +  .+++++..  .....+++|||++|++|.+++......+        +.        ....+..++
T Consensus        46 ~l----~~l~h-~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~--------~~~~~~~~i  102 (262)
T cd05572          46 IL----EECNH-P--FIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFD--------EY--------TARFYIACV  102 (262)
T ss_pred             HH----HhCCC-C--CEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCC--------HH--------HHHHHHHHH
Confidence            11    11211 1  22222222  2345699999999999999886432211        11        112345568


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++.++|+.|++|+|++|.||+++.++.++|+|||.+..+...
T Consensus       103 ~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~  146 (262)
T cd05572         103 VLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG  146 (262)
T ss_pred             HHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence            88999999999999999999999999999999999999877654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.66  E-value=7.9e-16  Score=146.21  Aligned_cols=147  Identities=27%  Similarity=0.359  Sum_probs=97.7

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|..+ +|+.||+|+...........+  +++ ++.+++.+                          
T Consensus         6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~--~~~-e~~~l~~~--------------------------   56 (265)
T cd06605           6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQ--ILR-ELDILHKC--------------------------   56 (265)
T ss_pred             HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHH--HHH-HHHHHHHC--------------------------
Confidence            457999999999999964 799999998876543211110  000 11111111                          


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .+.|+..+.+.+..             ....+++|||++|++|.+++.....       ..++..       . ..+..+
T Consensus        57 ~~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~-------~~~~~~-------~-~~~~~~  108 (265)
T cd06605          57 NSPYIVGFYGAFYN-------------NGDISICMEYMDGGSLDKILKEVQG-------RIPERI-------L-GKIAVA  108 (265)
T ss_pred             CCCchhhhheeeec-------------CCEEEEEEEecCCCcHHHHHHHccC-------CCCHHH-------H-HHHHHH
Confidence            12344443332221             2455999999999999998865321       011111       1 124556


Q ss_pred             HHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          321 VEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       321 i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +..++.++|+ .|++|+|++|+||+++.+|.++|+|||.+..+...
T Consensus       109 l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~  154 (265)
T cd06605         109 VLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS  154 (265)
T ss_pred             HHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence            7789999999 99999999999999999999999999998776543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.66  E-value=1.3e-16  Score=161.91  Aligned_cols=47  Identities=19%  Similarity=0.216  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..+++.++.+||..|++|+|+||.||+++.++.++++|||++..+.
T Consensus       242 ~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~  288 (400)
T cd05105         242 FTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIM  288 (400)
T ss_pred             HHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecc
Confidence            56678899999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.66  E-value=4.3e-16  Score=151.31  Aligned_cols=154  Identities=17%  Similarity=0.272  Sum_probs=93.0

Q ss_pred             ccCCccccccccceeEEEEec-C---CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          159 FISEEPVAAASFGQVYRGSTL-D---GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~-~---G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      |...+.||+|+||.||+|... +   +..+|+|+...... .+..+...++..                           
T Consensus        14 y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~-~~~~e~~~~~~~---------------------------   65 (294)
T PHA02882         14 WKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE-TIVMETLVYNNI---------------------------   65 (294)
T ss_pred             eEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCC-chhhHHHHHHhh---------------------------
Confidence            445678999999999999964 3   56788887543221 111121111100                           


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCC------ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR------KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLD  308 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~------~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~  308 (433)
                           .+. +.......+....+..+|..+.....      ..+++||++.+ ++.+.+......        ++     
T Consensus        66 -----~~~-~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~-----  125 (294)
T PHA02882         66 -----YDI-DKIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCK--------NK-----  125 (294)
T ss_pred             -----hhH-HHHHHHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccC--------CH-----
Confidence                 000 11111122333345556666653221      33678887653 444444321100        01     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                         .....+..+++.++.++|+.|++|||+||.||++++++.++|+|||+++.+.
T Consensus       126 ---~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~  177 (294)
T PHA02882        126 ---KLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFI  177 (294)
T ss_pred             ---HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeec
Confidence               1122356678899999999999999999999999999999999999998763

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.66  E-value=1.3e-15  Score=144.43  Aligned_cols=144  Identities=19%  Similarity=0.182  Sum_probs=95.6

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|++|.||+|.. .|..||+|..+......                                        ++..
T Consensus        10 ~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~~----------------------------------------~~~~   48 (256)
T cd05082          10 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQ----------------------------------------AFLA   48 (256)
T ss_pred             eeeeecccCCCeEEEEEE-cCCcEEEEEeCCCchHH----------------------------------------HHHH
Confidence            356799999999999976 58899999876432110                                        0112


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+.+    +.+.+-+.....+.......+++|||++|++|.+++.......      .++..       +. .+..+
T Consensus        49 e~~~l~~----l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~~-------~~-~~~~~  110 (256)
T cd05082          49 EASVMTQ----LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV------LGGDC-------LL-KFSLD  110 (256)
T ss_pred             HHHHHHh----CCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCC------CCHHH-------HH-HHHHH
Confidence            2222222    2222222222222223355799999999999999886432211      01111       11 24456


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++.++|..|++|+|++|+||+++.++.++++|||++....
T Consensus       111 i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~  153 (256)
T cd05082         111 VCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  153 (256)
T ss_pred             HHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecc
Confidence            7889999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.66  E-value=1e-16  Score=152.26  Aligned_cols=140  Identities=19%  Similarity=0.176  Sum_probs=95.9

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|++|.||.|+..++..||||..+......   +                                    ++.+|
T Consensus         9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~---~------------------------------------~~~~e   49 (256)
T cd05113           9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---D------------------------------------EFIEE   49 (256)
T ss_pred             eeEecCcccceEEEEEecCCCcEEEEEcCCCcccH---H------------------------------------HHHHH
Confidence            45799999999999987777789999876432110   0                                    01122


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ...+.+    +.   +-.+++++..+  ....+++|||++|++|.+++..... .      .++.+       + ..+..
T Consensus        50 ~~~l~~----l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~-~------~~~~~-------~-~~~~~  107 (256)
T cd05113          50 AKVMMK----LS---HEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGK-R------FQPSQ-------L-LEMCK  107 (256)
T ss_pred             HHHHhc----CC---CCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCC-C------CCHHH-------H-HHHHH
Confidence            222222    11   22334444332  2456999999999999998864321 0      11111       1 12556


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ++..++.++|+.|++|+|++|+||+++.+++++++|||.+..+
T Consensus       108 ~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~  150 (256)
T cd05113         108 DVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYV  150 (256)
T ss_pred             HHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceec
Confidence            7888999999999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.66  E-value=1.8e-16  Score=154.94  Aligned_cols=146  Identities=21%  Similarity=0.231  Sum_probs=97.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|..||+|..+.........+                                     +.
T Consensus         5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~-------------------------------------~~   47 (308)
T cd06615           5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQ-------------------------------------II   47 (308)
T ss_pred             EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHH-------------------------------------HH
Confidence            346799999999999995 5789999998765433211100                                     01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .|...+.+    +.+..-+.+...+. .....+++|||++|++|.+++......+        +        .....+..
T Consensus        48 ~E~~~l~~----l~h~~iv~~~~~~~-~~~~~~lv~ey~~~~~L~~~l~~~~~~~--------~--------~~~~~~~~  106 (308)
T cd06615          48 RELKVLHE----CNSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKAGRIP--------E--------NILGKISI  106 (308)
T ss_pred             HHHHHHHh----CCCCCCCeEEEEEe-eCCEEEEEeeccCCCcHHHHHHhcCCCC--------H--------HHHHHHHH
Confidence            12222211    11111122222221 2356699999999999999986542221        1        11223566


Q ss_pred             HHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..++.++|+ .|++|+|++|+||+++.++.++++|||++..+..
T Consensus       107 ~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (308)
T cd06615         107 AVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  152 (308)
T ss_pred             HHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc
Confidence            78889999997 6999999999999999999999999999876543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.66  E-value=3.2e-17  Score=164.08  Aligned_cols=188  Identities=14%  Similarity=0.171  Sum_probs=125.0

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|-||.||.+....+..||||..||+.......                                     ||..|
T Consensus       543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~-------------------------------------~F~kE  585 (807)
T KOG1094|consen  543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARN-------------------------------------DFLKE  585 (807)
T ss_pred             hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHH-------------------------------------HHHHH
Confidence            56899999999999998777999999999976543222                                     23445


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .+-+.++    ++ |+  |.+++..  ...+.+++|||++.|+|.+++........+.             ..... +..
T Consensus       586 IkiLsqL----kh-PN--IveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t-------------~~~vs-i~t  644 (807)
T KOG1094|consen  586 IKILSRL----KH-PN--IVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAET-------------APGVS-ICT  644 (807)
T ss_pred             HHHHhcc----CC-CC--eeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCccccc-------------chhHH-HHH
Confidence            4444333    11 21  2222222  1245689999999999999997653222000             01112 677


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHH-HHHHHHHhcCHHHHHHHHHhcCCCCCC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAML-ASIVHIVNGDWQSLVHSLTEMDVVRPG  398 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~-~~~~~~~~~d~~~~~~~l~~~g~~~~~  398 (433)
                      +|++++.||-+.+|+|||+-+.|+|++.++++||+||||++.+-...-...- +.+.-     ...++-.-+-+|..+..
T Consensus       645 qiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlp-----iRwmawEsillgkFtta  719 (807)
T KOG1094|consen  645 QIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLP-----IRWMAWESILLGKFTTA  719 (807)
T ss_pred             HHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeee-----eeehhHHHHHhccccch
Confidence            8999999999999999999999999999999999999999965322111000 00000     11233334456777777


Q ss_pred             CChHHHHHHHHHHh
Q 013944          399 TNTLRVTMDLEDAL  412 (433)
Q Consensus       399 ~d~~~~~~~l~~~l  412 (433)
                      .|+|.|+..+.+++
T Consensus       720 SDvWafgvTlwE~~  733 (807)
T KOG1094|consen  720 SDVWAFGVTLWEVF  733 (807)
T ss_pred             hhhhhhHHHHHHHH
Confidence            88888887777665

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.66  E-value=1.6e-16  Score=151.07  Aligned_cols=149  Identities=19%  Similarity=0.167  Sum_probs=94.7

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|... +|+.||+|..++....... ....                                  +.
T Consensus         6 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-~~~~----------------------------------~~   50 (267)
T cd08224           6 IEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAK-ARQD----------------------------------CL   50 (267)
T ss_pred             eeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchh-hHHH----------------------------------HH
Confidence            4568999999999999964 8999999987642110000 0000                                  11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|..-+.    .+.+ +  .+++++..  .....+++|||++|++|.+++.......    ..+++.+       .. .+
T Consensus        51 ~ei~~l~----~~~~-~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~-------~~-~~  111 (267)
T cd08224          51 KEIDLLK----QLDH-P--NVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQK----RLIPERT-------IW-KY  111 (267)
T ss_pred             HHHHHHH----hCCC-C--CeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccC----CCcCHHH-------HH-HH
Confidence            1211111    1111 1  12222221  2345699999999999998875421100    0111111       11 24


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++..++.++|+.|++|+|++|.||+++.+|.++++|||++..+.
T Consensus       112 ~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224         112 FVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             HHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence            4567789999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.66  E-value=1.3e-16  Score=151.41  Aligned_cols=140  Identities=18%  Similarity=0.236  Sum_probs=93.0

Q ss_pred             cccccccceeEEEEe---cCCCEEEEEEcCCCchhh-HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          164 PVAAASFGQVYRGST---LDGSIVAVKVQRPNLRHV-VVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       164 pigsgS~gqVy~a~l---~~G~~VAVKv~~p~~~~~-~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .||+|++|.||+|.+   .++..||+|+.+...... ...+                                     +.
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~-------------------------------------~~   44 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDE-------------------------------------LL   44 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHH-------------------------------------HH
Confidence            589999999999975   367899999986443211 0000                                     01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      .|..-+.+    +. +++  +.+.+.. .....+++|||+++++|.+++......+        +..       . ..+.
T Consensus        45 ~e~~~l~~----l~-h~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~-------~-~~i~  101 (257)
T cd05116          45 REANVMQQ----LD-NPY--IVRMIGICEAESWMLVMELAELGPLNKFLQKNKHVT--------EKN-------I-TELV  101 (257)
T ss_pred             HHHHHHHh----CC-CCC--cceEEEEEcCCCcEEEEecCCCCcHHHHHHhcCCCC--------HHH-------H-HHHH
Confidence            12111111    11 121  2222221 1245589999999999999886432221        111       1 1245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.++|+.|++|+|+||.||++++++.++++|||++..+.
T Consensus       102 ~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~  146 (257)
T cd05116         102 HQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALG  146 (257)
T ss_pred             HHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccC
Confidence            678889999999999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.66  E-value=2.6e-16  Score=149.87  Aligned_cols=144  Identities=16%  Similarity=0.188  Sum_probs=96.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchh--hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH--VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~--~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.||.|++|.||+|.. ++++.||+|+...+...  .+..++.+++       .+                       
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~-------~l-----------------------   59 (263)
T cd05052          10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK-------EI-----------------------   59 (263)
T ss_pred             EeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHH-------hC-----------------------
Confidence            356799999999999996 47899999987654221  1111111111       11                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .+.|+.++.+.+.             .....+++|||++|++|.+++.......      .+..      .  ...+
T Consensus        60 ---~h~~i~~~~~~~~-------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~------l~~~------~--~~~~  109 (263)
T cd05052          60 ---KHPNLVQLLGVCT-------------REPPFYIITEFMTYGNLLDYLRECNRQE------VNAV------V--LLYM  109 (263)
T ss_pred             ---CCCChhheEEEEc-------------CCCCcEEEEEeCCCCcHHHHHHhCCCCC------CCHH------H--HHHH
Confidence               1223333322221             2345589999999999999886432111      1111      1  1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.++|..|++|+|++|.||++++++.++++|||++.....
T Consensus       110 ~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052         110 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             HHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence            66788899999999999999999999999999999999999876643

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.66  E-value=1.8e-16  Score=152.31  Aligned_cols=141  Identities=21%  Similarity=0.258  Sum_probs=93.9

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|++|+||+|+.+ +|+.||+|+......     +.+..                                    
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~------------------------------------   49 (286)
T cd07847           6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALR------------------------------------   49 (286)
T ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHH------------------------------------
Confidence            457999999999999964 799999998753211     11111                                    


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                           |...+.+    +.+..-+.+...+ ......+++|||++|+.+..+.......        ++..        ..
T Consensus        50 -----e~~~l~~----~~h~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~~~~~~--------~~~~--------~~  103 (286)
T cd07847          50 -----EIRMLKQ----LKHPNLVNLIEVF-RRKRKLHLVFEYCDHTVLNELEKNPRGV--------PEHL--------IK  103 (286)
T ss_pred             -----HHHHHHh----CCCCCEeeeeeEE-eeCCEEEEEEeccCccHHHHHHhCCCCC--------CHHH--------HH
Confidence                 2111111    1111112222222 1234568999999998887765432211        1111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..+++.++.+||..|++|+|++|.||+++.+|.++|+|||++..+..
T Consensus       104 ~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07847         104 KIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG  152 (286)
T ss_pred             HHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence            3556678899999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.66  E-value=2.2e-16  Score=150.53  Aligned_cols=144  Identities=22%  Similarity=0.322  Sum_probs=98.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||+|+.+.......    ..+                                 
T Consensus        11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~----~~~---------------------------------   53 (267)
T cd06646          11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF----SLI---------------------------------   53 (267)
T ss_pred             cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchH----HHH---------------------------------
Confidence            34457899999999999995 5889999999865432211    111                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       ..|...+.++    . ++  .+++++..  .....++||||++|++|.+++......+        +..        ..
T Consensus        54 -~~e~~~l~~~----~-h~--~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~--------~~~--------~~  109 (267)
T cd06646          54 -QQEIFMVKEC----K-HC--NIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLS--------ELQ--------IA  109 (267)
T ss_pred             -HHHHHHHHhc----C-CC--CeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCC--------HHH--------HH
Confidence             1122222111    1 11  12222222  2356689999999999999876432221        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..+++.++.++|+.|++|+|++|+||+++.++.++++|||++..+.
T Consensus       110 ~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646         110 YVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeec
Confidence            355678889999999999999999999999999999999999988664

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.66  E-value=1e-16  Score=152.04  Aligned_cols=140  Identities=19%  Similarity=0.179  Sum_probs=96.4

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchh--hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRH--VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~--~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+.||+|++|.||+|..+++..+|+|+.+++...  .+..                                       
T Consensus         8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~---------------------------------------   48 (256)
T cd05059           8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIE---------------------------------------   48 (256)
T ss_pred             hhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHH---------------------------------------
Confidence            45679999999999999877789999987653221  1111                                       


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                        |...+.+    +. ++  .+++.+.  ......+++|||++|++|.+++....+.       .++..       . ..
T Consensus        49 --e~~~l~~----l~-~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~-------~-~~  104 (256)
T cd05059          49 --EAKVMMK----LS-HP--NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGK-------LGTEW-------L-LD  104 (256)
T ss_pred             --HHHHHHh----CC-CC--CEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccC-------CCHHH-------H-HH
Confidence              2111111    11 22  2333332  2335679999999999999988643210       11111       1 12


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.++|+.|++|+|++|+||+++.+|.++++|||+++...
T Consensus       105 i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~  151 (256)
T cd05059         105 MCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVL  151 (256)
T ss_pred             HHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecc
Confidence            44567789999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.65  E-value=4.7e-16  Score=152.49  Aligned_cols=146  Identities=22%  Similarity=0.232  Sum_probs=96.3

Q ss_pred             ccCCccccccccceeEEEEe-cCCC----EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGS----IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~----~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      +...+.||+|+||+||+|++ .+|+    .||||+.++........+                                 
T Consensus         9 f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~---------------------------------   55 (316)
T cd05108           9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE---------------------------------   55 (316)
T ss_pred             ceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHH---------------------------------
Confidence            44567899999999999985 3444    489999875432211111                                 


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                          +..|...+.    .+.+ +  ++.+.+.. .....++++||+++++|.+++......       .+..       .
T Consensus        56 ----~~~e~~~l~----~l~h-~--niv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~-------~~~~-------~  110 (316)
T cd05108          56 ----ILDEAYVMA----SVDN-P--HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-------IGSQ-------Y  110 (316)
T ss_pred             ----HHHHHHHHH----hCCC-C--CCCeEEEEEcCCCceeeeecCCCCCHHHHHHhcccc-------CCHH-------H
Confidence                111222111    1111 1  22233322 234568999999999999988643210       1111       1


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +. .+..+++.+|.|||+.|++|+|+||+||+++.++.++|+|||+++.+.
T Consensus       111 ~~-~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108         111 LL-NWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             HH-HHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccccc
Confidence            11 244578889999999999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.65  E-value=1.5e-16  Score=160.99  Aligned_cols=141  Identities=18%  Similarity=0.175  Sum_probs=93.2

Q ss_pred             ccCCccccccccceeEEEEec---CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          159 FISEEPVAAASFGQVYRGSTL---DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~---~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      |...+.||+|++|.||+|...   +++.||||....+.  ...+++.+++       .+                     
T Consensus        94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--~~~~E~~il~-------~l---------------------  143 (392)
T PHA03207         94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--TPGREIDILK-------TI---------------------  143 (392)
T ss_pred             eEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--cHHHHHHHHH-------hc---------------------
Confidence            334568999999999999753   46889999876432  1222333332       11                     


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                           .+.|+.++.+.+             ......+++||++. ++|.+++.....++        ...        ..
T Consensus       144 -----~h~~iv~~~~~~-------------~~~~~~~lv~e~~~-~~l~~~l~~~~~l~--------~~~--------~~  188 (392)
T PHA03207        144 -----SHRAIINLIHAY-------------RWKSTVCMVMPKYK-CDLFTYVDRSGPLP--------LEQ--------AI  188 (392)
T ss_pred             -----CCCCccceeeeE-------------eeCCEEEEEehhcC-CCHHHHHHhcCCCC--------HHH--------HH
Confidence                 122222222211             12245689999997 46766664322221        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..+++.++.+||..|++|+|+||.||+++.++.++|+|||++..+..
T Consensus       189 ~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~  237 (392)
T PHA03207        189 TIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA  237 (392)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence            3556788899999999999999999999999999999999999876643

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.65  E-value=5.7e-16  Score=151.51  Aligned_cols=150  Identities=19%  Similarity=0.232  Sum_probs=92.3

Q ss_pred             CCccccccccceeEEEEec---CCCEEEEEEcCCCc-hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTL---DGSIVAVKVQRPNL-RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~---~G~~VAVKv~~p~~-~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      +...||+|+||.||+|+.+   ++..||+|..+... ......++.+++                               
T Consensus         5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~-------------------------------   53 (317)
T cd07867           5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLR-------------------------------   53 (317)
T ss_pred             eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHH-------------------------------
Confidence            4467999999999999964   45789999876431 111111221111                               


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCC-CCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVD-GSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~  314 (433)
                                    .+.+.+-+.+..++.. .....+++|||+++ ++.+++......... ....++        ....
T Consensus        54 --------------~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~--------~~~~  110 (317)
T cd07867          54 --------------ELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLP--------RSMV  110 (317)
T ss_pred             --------------hCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCC--------HHHH
Confidence                          1222222222232221 22456899999885 666665432111000 000111        1122


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEE----ccCCcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRY----TSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv----~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+..+++.+|.+||+.|++|+|+||+||++    +.+|.++|+|||+++.+..
T Consensus       111 ~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~  164 (317)
T cd07867         111 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS  164 (317)
T ss_pred             HHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence            3356678899999999999999999999999    4567999999999987643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.65  E-value=2.1e-16  Score=150.58  Aligned_cols=144  Identities=24%  Similarity=0.287  Sum_probs=96.6

Q ss_pred             CCccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+.||+|+||.||+|+++    +...||||+.++........+                                    
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~------------------------------------   51 (266)
T cd05033           8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLD------------------------------------   51 (266)
T ss_pred             eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHH------------------------------------
Confidence            4578999999999999874    246899999876543221111                                    


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                       |..|...+.+    +.+ +  .+.+++..  .....+++|||++|++|.+++....+       .++...       +.
T Consensus        52 -~~~e~~~l~~----l~h-~--~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-------~~~~~~-------~~  109 (266)
T cd05033          52 -FLTEASIMGQ----FDH-P--NIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDG-------KFTVGQ-------LV  109 (266)
T ss_pred             -HHHHHHHHHh----CCC-C--CcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccC-------CCCHHH-------HH
Confidence             1112222211    111 1  22222222  23456999999999999998864321       011111       11


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                       .+..+++.++.+||+.|++|+|++|.||+++.++.++++|||++..+.
T Consensus       110 -~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033         110 -GMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             -HHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence             245567889999999999999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.65  E-value=1.8e-16  Score=151.00  Aligned_cols=143  Identities=20%  Similarity=0.306  Sum_probs=95.6

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|+||+|+. .+|+.||+|+.+.......    ..+.                                  .
T Consensus        14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~~~~----------------------------------~   55 (267)
T cd06645          14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF----AVVQ----------------------------------Q   55 (267)
T ss_pred             HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH----HHHH----------------------------------H
Confidence            46799999999999985 5799999999875432211    1111                                  1


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+    ..+.+..-+.+...+ ......+++|||++|++|.+++......+        +.+        ...+..+
T Consensus        56 e~~~~----~~l~h~~ii~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~~--------~~~~~~~  114 (267)
T cd06645          56 EIIMM----KDCKHSNIVAYFGSY-LRRDKLWICMEFCGGGSLQDIYHVTGPLS--------ESQ--------IAYVSRE  114 (267)
T ss_pred             HHHHH----HhCCCCCeeeEEEEE-EeCCEEEEEEeccCCCcHHHHHHhcCCCC--------HHH--------HHHHHHH
Confidence            11111    111111111111111 12355699999999999999876443222        111        1235566


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++.++.++|..|++|+|++|+||+++.++.++++|||++..+.
T Consensus       115 i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd06645         115 TLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQIT  157 (267)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence            7889999999999999999999999999999999999987653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.65  E-value=2e-16  Score=152.22  Aligned_cols=156  Identities=15%  Similarity=0.231  Sum_probs=96.0

Q ss_pred             CccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|++|.||+|+..      +++.||||+.+.........+   +                               
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~---~-------------------------------   55 (283)
T cd05091          10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREE---F-------------------------------   55 (283)
T ss_pred             HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHH---H-------------------------------
Confidence            457999999999999852      357899999875433211110   0                               


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCC-CCCCCch-hhhhhhHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSS-VDGSSTH-LDRQKLDAKW  311 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~-~~~~~~~-~~~~~~~~~~  311 (433)
                         ..|..    ....+.+ +  .+.+++..  .....++++||+++++|.+++....... ....... ..........
T Consensus        56 ---~~e~~----~~~~l~h-~--~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (283)
T cd05091          56 ---KHEAM----MRSRLQH-P--NIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPAD  125 (283)
T ss_pred             ---HHHHH----HHhcCCC-C--CcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHH
Confidence               11111    1111211 1  22233322  2245689999999999999986432111 0000000 0001111111


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                        ...+..++..++.++|+.|++|+|+||.||+++.++.++|+|||+++.+.
T Consensus       126 --~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (283)
T cd05091         126 --FVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVY  175 (283)
T ss_pred             --HHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccc
Confidence              12345678889999999999999999999999999999999999987664

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.65  E-value=2.9e-16  Score=150.21  Aligned_cols=154  Identities=18%  Similarity=0.172  Sum_probs=93.6

Q ss_pred             ccccccccceeEEEEec-CCC--EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          163 EPVAAASFGQVYRGSTL-DGS--IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~-~G~--~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      +.||+|++|.||+|+.+ +|.  .+++|..+.........                                     ++.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~-------------------------------------~~~   43 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR-------------------------------------DFA   43 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHH-------------------------------------HHH
Confidence            36899999999999974 554  46888876432221110                                     012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCC--CchhhhhhhHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGS--STHLDRQKLDAKWRLLD  315 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~l~~  315 (433)
                      .|...+.++.    ++++  +.+++..  .....+++|||++|++|.+++........+..  ........+.... . .
T Consensus        44 ~E~~~l~~l~----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~  115 (270)
T cd05047          44 GELEVLCKLG----HHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ-L-L  115 (270)
T ss_pred             HHHHHHHhhc----cCCC--eeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHH-H-H
Confidence            2222222221    1222  2233322  23456999999999999999865432111000  0000000111111 1 2


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      .+..++..++.++|+.|++|+|++|.||+++.++.++++|||++..
T Consensus       116 ~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~  161 (270)
T cd05047         116 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG  161 (270)
T ss_pred             HHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccc
Confidence            2456677899999999999999999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.65  E-value=1.7e-16  Score=152.86  Aligned_cols=156  Identities=17%  Similarity=0.185  Sum_probs=97.1

Q ss_pred             CccccccccceeEEEEe-----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          162 EEPVAAASFGQVYRGST-----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      .+.||+|+||+||+|+.     .+++.|++|..+.......   ...                                 
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~---~~~---------------------------------   53 (283)
T cd05090          10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ---WGE---------------------------------   53 (283)
T ss_pred             eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH---HHH---------------------------------
Confidence            36799999999999984     2568899998874322110   000                                 


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCC---chhhhhhhHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSS---THLDRQKLDAKW  311 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~---~~~~~~~~~~~~  311 (433)
                       +.+|...+.+    +.   +-.+++++..  .....+++|||+++++|.+++............   .......+....
T Consensus        54 -~~~E~~~l~~----l~---h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (283)
T cd05090          54 -FQQEASLMAE----LH---HPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGD  125 (283)
T ss_pred             -HHHHHHHHhh----CC---CCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHH
Confidence             1223222222    21   1223333332  235669999999999999998643221100000   000000111111


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                       +. -+..++..++.++|+.|++|+|++|.||+++.++.++++|||+++.+.
T Consensus       126 -~~-~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  175 (283)
T cd05090         126 -FL-HIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIY  175 (283)
T ss_pred             -HH-HHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEecccccccccc
Confidence             11 245567889999999999999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.64  E-value=1.6e-15  Score=142.69  Aligned_cols=144  Identities=20%  Similarity=0.243  Sum_probs=97.3

Q ss_pred             ccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          165 VAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       165 igsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      ||.|++|+||+++. .+|+.||+|+.+....... .....+..+..+++.+                          .+.
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~e~~~l~~l--------------------------~h~   53 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR-KEVEHTLTERNILSRI--------------------------NHP   53 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch-HHHHHHHHHHHHHHHc--------------------------CCC
Confidence            68999999999996 4699999998765432110 0111111111111111                          134


Q ss_pred             HHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEA  323 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~  323 (433)
                      |+..+.+.+....             ..+++|||++|++|.+++......+        +..        ...+..++..
T Consensus        54 ~i~~~~~~~~~~~-------------~~~~v~e~~~~~~L~~~l~~~~~l~--------~~~--------~~~~~~qi~~  104 (250)
T cd05123          54 FIVKLHYAFQTEE-------------KLYLVLEYAPGGELFSHLSKEGRFS--------EER--------ARFYAAEIVL  104 (250)
T ss_pred             cHHHHHHHeecCC-------------eeEEEEecCCCCcHHHHHHhcCCCC--------HHH--------HHHHHHHHHH
Confidence            5555554443332             3499999999999999886543221        111        1224556788


Q ss_pred             HHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          324 TLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       324 ~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++.++|..|++|+|++|.||+++.++.++++|||++.....
T Consensus       105 ~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~  145 (250)
T cd05123         105 ALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSS  145 (250)
T ss_pred             HHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence            99999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.64  E-value=4.4e-16  Score=150.06  Aligned_cols=142  Identities=22%  Similarity=0.267  Sum_probs=93.8

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|+||+|.. .+|+.||+|+...........+   +                                  .+
T Consensus        10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~---~----------------------------------~~   52 (284)
T cd06620          10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQ---I----------------------------------LR   52 (284)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHH---H----------------------------------HH
Confidence            45799999999999995 5799999998765432211111   0                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+..    +. +++  +++.+.  ......+|||||++|++|.+++...+..+        ..        ....+.
T Consensus        53 E~~~l~~----l~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~--------~~~~~~  109 (284)
T cd06620          53 ELQIMHE----CR-SPY--IVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIP--------VE--------ILGKIA  109 (284)
T ss_pred             HHHHHHH----cC-CCC--cceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCC--------HH--------HHHHHH
Confidence            2111111    11 111  112221  12356699999999999998876432211        11        112345


Q ss_pred             HHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.+||. .|++|+|++|.||+++.+++++++|||++..+.
T Consensus       110 ~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~  155 (284)
T cd06620         110 VAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI  155 (284)
T ss_pred             HHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchh
Confidence            567789999996 699999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.64  E-value=9.6e-16  Score=147.67  Aligned_cols=146  Identities=22%  Similarity=0.286  Sum_probs=97.7

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+.. +|+.||+|..+......   +...+..++.++..                          .
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~---~~~~~~~e~~~l~~--------------------------~   56 (286)
T cd06622           6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDES---KFNQIIMELDILHK--------------------------A   56 (286)
T ss_pred             hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHH---HHHHHHHHHHHHHh--------------------------c
Confidence            357999999999999964 89999999876433211   01111111111111                          1


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .+.|+.++.+.+....             ..++||||++|++|.+++......     ...++.        ....+..+
T Consensus        57 ~~~~i~~~~~~~~~~~-------------~~~lv~e~~~~~~l~~~~~~~~~~-----~~~~~~--------~~~~~~~~  110 (286)
T cd06622          57 VSPYIVDFYGAFFIEG-------------AVYMCMEYMDAGSLDKLYAGGVAT-----EGIPED--------VLRRITYA  110 (286)
T ss_pred             CCCcHHhhhhheecCC-------------eEEEEEeecCCCCHHHHHHhcccc-----CCCCHH--------HHHHHHHH
Confidence            2346666666554333             348999999999998887642100     001111        11234566


Q ss_pred             HHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++.+||. .|++|+|++|.||+++.++.++++|||++..+
T Consensus       111 i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  153 (286)
T cd06622         111 VVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             HHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            7789999997 59999999999999999999999999998765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=2.7e-16  Score=153.91  Aligned_cols=147  Identities=18%  Similarity=0.199  Sum_probs=97.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||...+..... ......+                                  .
T Consensus         5 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~----------------------------------~   49 (316)
T cd05574           5 KIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK-RNKVKRV----------------------------------L   49 (316)
T ss_pred             EeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccch-HHHHHHH----------------------------------H
Confidence            346799999999999996 469999999887542211 0011111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+..+    .   +-.+++++..  .....+++|||+.|++|.+++....+..      +++..        ...+
T Consensus        50 ~e~~~l~~l----~---~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------l~~~~--------~~~~  108 (316)
T cd05574          50 TEQEILATL----D---HPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKC------LSEEV--------ARFY  108 (316)
T ss_pred             HHHHHHHhC----C---CCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCc------cCHHH--------HHHH
Confidence            122222111    1   1123333332  2355699999999999999876432111      11111        1224


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++..++.++|..|++|+|+||.||+++.+|.++|+|||++....
T Consensus       109 ~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  154 (316)
T cd05574         109 AAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSD  154 (316)
T ss_pred             HHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence            5678889999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.64  E-value=7.3e-16  Score=148.89  Aligned_cols=147  Identities=16%  Similarity=0.195  Sum_probs=95.6

Q ss_pred             CccccccccceeEEEEe----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGST----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|++|.||+|+.    .+|+.||+|+.+.............                                  
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~----------------------------------   50 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEH----------------------------------   50 (290)
T ss_pred             eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHH----------------------------------
Confidence            45799999999999985    3789999998764321100000000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|.+-+.+    +.+.+  .++.++..  .....++||||++|++|.+++......+        +        ....
T Consensus        51 ~~~e~~~l~~----l~~~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~--------~--------~~~~  108 (290)
T cd05613          51 TRTERQVLEH----IRQSP--FLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFK--------E--------QEVQ  108 (290)
T ss_pred             HHHHHHHHHh----cccCC--ChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCC--------H--------HHHH
Confidence            0111111111    11112  22222222  2245589999999999999886543221        1        1112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..+++.++.+||..|++|+|++|.||+++.+++++|+|||++..+..
T Consensus       109 ~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  157 (290)
T cd05613         109 IYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE  157 (290)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence            3445678899999999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.64  E-value=1.1e-16  Score=155.70  Aligned_cols=178  Identities=17%  Similarity=0.169  Sum_probs=107.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||.|++|.||+|+. .+|+.||+|..+.........+                                     
T Consensus         8 y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-------------------------------------   50 (301)
T cd07873           8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCT-------------------------------------   50 (301)
T ss_pred             eEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhH-------------------------------------
Confidence            44567899999999999986 4789999998764322110000                                     


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.+    +.+ +  .+.+++..  .....++||||++| +|.+++......       .++.        ...
T Consensus        51 ~~~E~~~l~~----l~h-~--nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~-------~~~~--------~~~  107 (301)
T cd07873          51 AIREVSLLKD----LKH-A--NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNS-------INMH--------NVK  107 (301)
T ss_pred             HHHHHHHHHh----cCC-C--CcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCC-------CCHH--------HHH
Confidence            0111111111    111 1  12222222  22456899999985 777766532110       1111        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHH--------HHH--HHHH----HHHhcC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF--------AML--ASIV----HIVNGD  381 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~--------~~~--~~~~----~~~~~d  381 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.++.++++|||++.........        .+.  +.+.    .....|
T Consensus       108 ~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~D  187 (301)
T cd07873         108 LFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQID  187 (301)
T ss_pred             HHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHH
Confidence            35567888999999999999999999999999999999999998754321100        000  0000    122457


Q ss_pred             HHHHHHHHHhcCCCC
Q 013944          382 WQSLVHSLTEMDVVR  396 (433)
Q Consensus       382 ~~~~~~~l~~~g~~~  396 (433)
                      .++++..+++|-...
T Consensus       188 v~slG~~l~el~tg~  202 (301)
T cd07873         188 MWGVGCIFYEMSTGR  202 (301)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            888888887775443

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.64  E-value=1.4e-15  Score=144.59  Aligned_cols=142  Identities=18%  Similarity=0.145  Sum_probs=94.0

Q ss_pred             cccccccceeEEEEec---CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          164 PVAAASFGQVYRGSTL---DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       164 pigsgS~gqVy~a~l~---~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .||+|+||.||+|++.   ++..||||+..+........   .                                  +..
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~---~----------------------------------~~~   44 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRD---E----------------------------------MMR   44 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHH---H----------------------------------HHH
Confidence            3899999999999863   45679999987653322111   1                                  112


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |+.-+.+    +.+.+-+.+..+.  .....++||||++|++|.+++.....       ..++..       .. .+..+
T Consensus        45 E~~~l~~----l~h~~ii~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~-------~~~~~~-------~~-~~~~~  103 (257)
T cd05115          45 EAEIMHQ----LDNPYIVRMIGVC--EAEALMLVMEMASGGPLNKFLSGKKD-------EITVSN-------VV-ELMHQ  103 (257)
T ss_pred             HHHHHHh----cCCCCeEEEEEEE--cCCCeEEEEEeCCCCCHHHHHHhCCC-------CCCHHH-------HH-HHHHH
Confidence            2222222    2222222222222  13456999999999999998864221       011111       11 24556


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++.++|..|++|+|+||+||+++.++.++++|||++..+.
T Consensus       104 i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~  146 (257)
T cd05115         104 VSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALG  146 (257)
T ss_pred             HHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCcccccc
Confidence            7889999999999999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.64  E-value=3.4e-16  Score=149.05  Aligned_cols=150  Identities=19%  Similarity=0.222  Sum_probs=94.2

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCC-chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPN-LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~-~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+.||+|++|+||+|+. .+|+.||||..... ....  ....-+..+..++..                         
T Consensus         6 ~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~--~~~~~~~~e~~~l~~-------------------------   58 (267)
T cd08229           6 IEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDA--KARADCIKEIDLLKQ-------------------------   58 (267)
T ss_pred             hhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhH--HHHHHHHHHHHHHHH-------------------------
Confidence            356899999999999995 58999999976431 1110  000000000111111                         


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                       ..+.|+.++...+..             ....+++|||++|++|.+++.......    ...++..       . ..+.
T Consensus        59 -~~h~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~----~~~~~~~-------~-~~~~  112 (267)
T cd08229          59 -LNHPNVIKYYASFIE-------------DNELNIVLELADAGDLSRMIKHFKKQK----RLIPEKT-------V-WKYF  112 (267)
T ss_pred             -ccCCchhhhhheeEe-------------CCeEEEEEEecCCCCHHHHHHHhhccC----CCCCHHH-------H-HHHH
Confidence             112233333322211             234589999999999999876321100    0011111       1 1245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+++.++.+||+.|++|+|++|.||+++.++.++++|||++..+.
T Consensus       113 ~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229         113 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence            567889999999999999999999999999999999999877653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.64  E-value=1.8e-15  Score=145.40  Aligned_cols=156  Identities=19%  Similarity=0.250  Sum_probs=96.7

Q ss_pred             CCccccccccceeEEEEec-C-----CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL-D-----GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~-----G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      -.+.||.|++|.||+|... .     +..||+|..+.........+                                  
T Consensus         9 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~----------------------------------   54 (283)
T cd05048           9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQE----------------------------------   54 (283)
T ss_pred             hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHH----------------------------------
Confidence            3568999999999999853 2     26799998875432211110                                  


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCc--hhhhhhhHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST--HLDRQKLDAK  310 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~--~~~~~~~~~~  310 (433)
                         |.+|...+.+    +.+ +  .+.+++..  .....+++|||++|++|.+++......+......  ......+...
T Consensus        55 ---~~~ei~~l~~----l~h-~--~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  124 (283)
T cd05048          55 ---FRQEAELMSD----LQH-P--NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCS  124 (283)
T ss_pred             ---HHHHHHHHHh----cCC-c--ccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHH
Confidence               1122222222    111 1  23333322  2345789999999999999987543211000000  0000011111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      . + ..+..++..++.+||..|++|+|+||+||++++++.++|+|||++...
T Consensus       125 ~-~-~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~  174 (283)
T cd05048         125 D-F-LHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDI  174 (283)
T ss_pred             H-H-HHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeec
Confidence            1 1 235567888999999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.64  E-value=3.1e-16  Score=156.72  Aligned_cols=139  Identities=12%  Similarity=0.140  Sum_probs=94.2

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|+||+|+. .+++.||+|+...+..   ..+..+++       .+                       
T Consensus        68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~---~~E~~~l~-------~l-----------------------  114 (357)
T PHA03209         68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT---LIEAMLLQ-------NV-----------------------  114 (357)
T ss_pred             cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcccc---HHHHHHHH-------hC-----------------------
Confidence            44567899999999999996 4678999998654321   12222222       11                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .+.|+.++.+.+..             ....++|||++.| +|.+++......       ++..        ....+
T Consensus       115 ---~h~~iv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~l~~~~~~-------~~~~--------~~~~i  162 (357)
T PHA03209        115 ---NHPSVIRMKDTLVS-------------GAITCMVLPHYSS-DLYTYLTKRSRP-------LPID--------QALII  162 (357)
T ss_pred             ---CCCCCcChhheEEe-------------CCeeEEEEEccCC-cHHHHHHhccCC-------CCHH--------HHHHH
Confidence               23344444433322             2345899999975 677766432110       1111        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..+++.+|.+||..|++|+|+||.||+++.++.++|+|||++...
T Consensus       163 ~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  207 (357)
T PHA03209        163 EKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFP  207 (357)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence            667889999999999999999999999999999999999998743

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.64  E-value=4.8e-16  Score=150.68  Aligned_cols=141  Identities=23%  Similarity=0.286  Sum_probs=95.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchh--------hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH--------VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~--------~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      .+.||+|++|+||+|.. .+|+.||||..+.....        .+..++.+++                           
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~---------------------------   57 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQ---------------------------   57 (298)
T ss_pred             eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHh---------------------------
Confidence            35799999999999996 47999999988754322        0111111111                           


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                            ...+.|+.++.+.+.+             ....++||||+ +++|.+++.....       ..++..       
T Consensus        58 ------~~~h~~i~~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~i~~~~~-------~~~~~~-------  103 (298)
T cd07841          58 ------ELKHPNIIGLLDVFGH-------------KSNINLVFEFM-ETDLEKVIKDKSI-------VLTPAD-------  103 (298)
T ss_pred             ------hcCCCCChhhhheeec-------------CCEEEEEEccc-CCCHHHHHhccCC-------CCCHHH-------
Confidence                  0112333333333322             23459999999 8899988864320       011111       


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      + ..+..++..++.+||..|++|+|++|+||+++.+|.++|+|||++.....
T Consensus       104 ~-~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841         104 I-KSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             H-HHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            1 22556788899999999999999999999999999999999999876643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.64  E-value=2e-16  Score=153.81  Aligned_cols=142  Identities=19%  Similarity=0.265  Sum_probs=95.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||+|..........    ..+                                  .
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~----~~~----------------------------------~   64 (297)
T cd06656          23 RFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK----ELI----------------------------------I   64 (297)
T ss_pred             eeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH----HHH----------------------------------H
Confidence            446799999999999995 5899999998754322110    000                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.    .+ +++  .+.+++..  .....++||||++|++|.+++.... .        ++.+       + ..+
T Consensus        65 ~e~~~l~----~~-~h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~--------~~~~-------~-~~~  120 (297)
T cd06656          65 NEILVMR----EN-KNP--NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-M--------DEGQ-------I-AAV  120 (297)
T ss_pred             HHHHHHH----hC-CCC--CEeeEEEEEecCCEEEEeecccCCCCHHHHHHhCC-C--------CHHH-------H-HHH
Confidence            1211111    11 122  22333322  3456799999999999999875321 1        1111       1 124


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|++|+||+++.+|.++++|||++.....
T Consensus       121 ~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~  167 (297)
T cd06656         121 CRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (297)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence            55677899999999999999999999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.64  E-value=5.7e-16  Score=146.21  Aligned_cols=145  Identities=19%  Similarity=0.192  Sum_probs=96.7

Q ss_pred             CccccccccceeEEEEec-C----CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          162 EEPVAAASFGQVYRGSTL-D----GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~----G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      .+.||.|++|+||+|+.. +    +..||+|+.++.....   ....+                                
T Consensus         4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~--------------------------------   48 (258)
T smart00219        4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ---QIEEF--------------------------------   48 (258)
T ss_pred             cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH---HHHHH--------------------------------
Confidence            357999999999999964 3    4899999987654321   11111                                


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                        ..|...+.+    + +++  .+.+.+..  .....+++|||++|++|.+++.......      +++.        ..
T Consensus        49 --~~e~~~l~~----l-~~~--~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~------~~~~--------~~  105 (258)
T smart00219       49 --LREARIMRK----L-DHP--NIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKE------LSLS--------DL  105 (258)
T ss_pred             --HHHHHHHHh----c-CCC--chheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhcc------CCHH--------HH
Confidence              112221111    1 112  22233322  2256799999999999999886432100      1111        11


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+..++..++.++|+.|++|+|++|+||+++.++.++++|||++.....
T Consensus       106 ~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219      106 LSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence            23556677899999999999999999999999999999999999876653

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=9.8e-16  Score=145.18  Aligned_cols=171  Identities=23%  Similarity=0.276  Sum_probs=109.3

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+++|+|++|.||+|.. .+++.+++|+.......    +...+..                                 
T Consensus         7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~---------------------------------   49 (262)
T cd06613           7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD----DFEIIQQ---------------------------------   49 (262)
T ss_pred             EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh----hHHHHHH---------------------------------
Confidence            356899999999999996 47889999988644222    1111111                                 


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhc-cCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLS-TGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                       |...+.+    +.   +..+.+.+..  .....+++|||++|++|.+++... ..++        +.+        ...
T Consensus        50 -e~~~l~~----~~---h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~--------~~~--------~~~  105 (262)
T cd06613          50 -EISMLKE----CR---HPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLS--------ELQ--------IAY  105 (262)
T ss_pred             -HHHHHHh----CC---CCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCC--------HHH--------HHH
Confidence             1111111    11   1112222221  234568999999999999987643 2211        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHH--H-----------HHHHH---HHHHhc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF--A-----------MLASI---VHIVNG  380 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~--~-----------~~~~~---~~~~~~  380 (433)
                      +..++..++.+||..|++|+|++|.||+++.+|.++++|||++..+......  .           +....   ......
T Consensus       106 ~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~  185 (262)
T cd06613         106 VCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKC  185 (262)
T ss_pred             HHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchh
Confidence            5566788999999999999999999999999999999999998776543210  0           11000   111235


Q ss_pred             CHHHHHHHHHhc
Q 013944          381 DWQSLVHSLTEM  392 (433)
Q Consensus       381 d~~~~~~~l~~~  392 (433)
                      |.++++..+++|
T Consensus       186 Di~slG~~l~~~  197 (262)
T cd06613         186 DIWALGITAIEL  197 (262)
T ss_pred             hhHHHHHHHHHH
Confidence            888888888877

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.64  E-value=2.1e-15  Score=145.59  Aligned_cols=149  Identities=15%  Similarity=0.169  Sum_probs=94.0

Q ss_pred             CccccccccceeEEEEe----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGST----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|++|+||+|+.    .+++.||||+.+......-......+..++.++..+                       
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~-----------------------   61 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV-----------------------   61 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhc-----------------------
Confidence            46799999999999984    367899999876321110000000011111111110                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                        ..+.|+..+...+.             .....++||||++|++|.+.+......+        +.        ....+
T Consensus        62 --~~~~~i~~~~~~~~-------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~--------~~~~~  110 (288)
T cd05583          62 --RRCPFLVTLHYAFQ-------------TDTKLHLILDYVNGGELFTHLYQREHFT--------ES--------EVRVY  110 (288)
T ss_pred             --cCCcchhhhheeee-------------cCCEEEEEEecCCCCcHHHHHhhcCCcC--------HH--------HHHHH
Confidence              01223333332221             2244589999999999988875432111        11        11223


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.++.+||..|++|+|++|.||+++.++.++++|||++..+..
T Consensus       111 ~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  157 (288)
T cd05583         111 IAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA  157 (288)
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence            45678899999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.64  E-value=5e-16  Score=150.86  Aligned_cols=91  Identities=19%  Similarity=0.134  Sum_probs=63.2

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCC--chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSS--THLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT  346 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~  346 (433)
                      ...+++|||+++++|.+++......+.....  .......+...  ....+..++..++.++|+.|++|+|+||.||+++
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~  153 (297)
T cd05089          76 GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQ--QLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG  153 (297)
T ss_pred             CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHH--HHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC
Confidence            4568999999999999998654322111000  00000001111  1123556788899999999999999999999999


Q ss_pred             cCCcEEEEecccccc
Q 013944          347 SSGQIGFLDFGLLCR  361 (433)
Q Consensus       347 ~~g~l~l~DFGl~~~  361 (433)
                      .++.++|+|||++..
T Consensus       154 ~~~~~kl~dfg~~~~  168 (297)
T cd05089         154 ENLASKIADFGLSRG  168 (297)
T ss_pred             CCCeEEECCcCCCcc
Confidence            999999999998754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.64  E-value=2.3e-16  Score=153.28  Aligned_cols=143  Identities=19%  Similarity=0.257  Sum_probs=95.9

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.+|+|++|.||+|+. .+|+.|++|...........    .                                  +
T Consensus        23 ~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~----~----------------------------------~   64 (296)
T cd06654          23 TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE----L----------------------------------I   64 (296)
T ss_pred             eeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHH----H----------------------------------H
Confidence            3346799999999999985 58899999987543221100    0                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+..    +. +++  +.+++..  .....++||||++|++|.+++.... .        .+.+       + ..
T Consensus        65 ~~e~~~l~~----~~-h~~--v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~--------~~~~-------~-~~  120 (296)
T cd06654          65 INEILVMRE----NK-NPN--IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-M--------DEGQ-------I-AA  120 (296)
T ss_pred             HHHHHHHHh----CC-CCC--EeeEEEEEEeCCEEEEeecccCCCCHHHHHHhcC-C--------CHHH-------H-HH
Confidence            112221111    11 222  2233322  2356799999999999999875321 1        1111       1 12


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..++.+||..|++|+|++|.||+++.++.++++|||++.....
T Consensus       121 i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~  168 (296)
T cd06654         121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (296)
T ss_pred             HHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence            456678899999999999999999999999999999999998876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.64  E-value=8.7e-16  Score=147.83  Aligned_cols=176  Identities=19%  Similarity=0.223  Sum_probs=109.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR--HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~--~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.||+|++|.||+|+. .+|+.||+|+.++...  ..+..++.                                   
T Consensus        22 ~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~-----------------------------------   66 (286)
T cd06638          22 IIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYN-----------------------------------   66 (286)
T ss_pred             eeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHH-----------------------------------
Confidence            346899999999999986 5789999998764221  11111111                                   


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc-------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY-------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                            .+.++.    +++  .+++++..       .....+++|||++|++|.+++.......    ...++       
T Consensus        67 ------~l~~l~----~h~--~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~-------  123 (286)
T cd06638          67 ------ILKALS----DHP--NVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRG----ERMEE-------  123 (286)
T ss_pred             ------HHHHHh----cCC--CeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccC----ccccH-------
Confidence                  111111    111  22333221       1234699999999999998875321000    00111       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH-------------HHHHHH----
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ-------------FAMLAS----  373 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~-------------~~~~~~----  373 (433)
                       .....+..++..++.++|..|++|+|++|+||+++.++.++++|||++..+.....             ......    
T Consensus       124 -~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  202 (286)
T cd06638         124 -PIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQL  202 (286)
T ss_pred             -HHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhc
Confidence             11123556678899999999999999999999999999999999999876542110             111100    


Q ss_pred             -HHHHHhcCHHHHHHHHHhcCCC
Q 013944          374 -IVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       374 -~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                       -......|+++++..+++|...
T Consensus       203 ~~~~~~~~Dv~slGvi~~el~~g  225 (286)
T cd06638         203 DSTYDARCDVWSLGITAIELGDG  225 (286)
T ss_pred             cccccchhhhhhHHHHHHHHhcC
Confidence             0012356888888888887543

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.64  E-value=2.3e-16  Score=169.98  Aligned_cols=147  Identities=23%  Similarity=0.337  Sum_probs=98.0

Q ss_pred             ccCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||.|+||.||+|+.. +|+.||||+.+...... ......                                  
T Consensus         6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~-~~~~~~----------------------------------   50 (669)
T cd05610           6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN-KNMVHQ----------------------------------   50 (669)
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC-HHHHHH----------------------------------
Confidence            334578999999999999964 79999999986421100 000000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+. +++  +++++.  ......+|||||++|++|.+++.....++        +.        ...
T Consensus        51 ~~~E~~~l~----~l~-hp~--Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~--------~~--------~~~  107 (669)
T cd05610          51 VQAERDALA----LSK-SPF--IVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFD--------EE--------MAV  107 (669)
T ss_pred             HHHHHHHHH----hcC-CCC--cCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCC--------HH--------HHH
Confidence            011111111    111 121  222222  22356799999999999999886432221        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..+++.+|.|||..||+|+||||.|||++.+|.++|+|||+++...
T Consensus       108 ~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~  155 (669)
T cd05610         108 KYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL  155 (669)
T ss_pred             HHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence            356678889999999999999999999999999999999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.64  E-value=4.3e-16  Score=147.13  Aligned_cols=142  Identities=20%  Similarity=0.265  Sum_probs=96.4

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+.. +++.|++|..+....      ...                                  +.
T Consensus         7 ~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~----------------------------------~~   46 (256)
T cd06612           7 ILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED------LQE----------------------------------II   46 (256)
T ss_pred             hhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH------HHH----------------------------------HH
Confidence            3567999999999999975 589999998764311      001                                  11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++     +++  .+++++..  .....+++|||++|++|.+++......       +++.        ....+
T Consensus        47 ~e~~~~~~l-----~~~--~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~-------l~~~--------~~~~~  104 (256)
T cd06612          47 KEISILKQC-----DSP--YIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKT-------LTEE--------EIAAI  104 (256)
T ss_pred             HHHHHHHhC-----CCC--cEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccC-------CCHH--------HHHHH
Confidence            222222222     112  22233322  225568999999999999988643210       1111        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.++|..|++|+|++|+||+++.++.++|+|||++..+..
T Consensus       105 ~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612         105 LYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence            56677899999999999999999999999999999999999887654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.63  E-value=8.8e-16  Score=155.20  Aligned_cols=187  Identities=19%  Similarity=0.205  Sum_probs=122.3

Q ss_pred             ccccccccceeEEEEec--CC---CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          163 EPVAAASFGQVYRGSTL--DG---SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~--~G---~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +.||+|.||.||+|+++  ++   .+||||..+-....  ..                                 ..-.+
T Consensus       163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~--~~---------------------------------~~~~e  207 (474)
T KOG0194|consen  163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSEL--TK---------------------------------EQIKE  207 (474)
T ss_pred             ceeecccccEEEEEEEEecCCceeeeeEEEeecccccc--cH---------------------------------HHHHH
Confidence            78999999999999974  33   23899987631100  00                                 01112


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      |.+||+-+..+       .+.+|.+.|.  ....+.+||||+|.||+|.+++...++             .+...+++. 
T Consensus       208 ~m~EArvMr~l-------~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-------------~v~~~ek~~-  266 (474)
T KOG0194|consen  208 FMKEARVMRQL-------NHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK-------------SLPTLEKLR-  266 (474)
T ss_pred             HHHHHHHHHhC-------CCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC-------------CCCHHHHHH-
Confidence            45566655443       2333444444  455788999999999999999986542             011222322 


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                       ...+.+.||.|||..+++|||+-..|+|++.++.+||+|||+++.-+...   +...   ...--...++..-.+-|..
T Consensus       267 -~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~---~~~~---~~klPirWLAPEtl~~~~~  339 (474)
T KOG0194|consen  267 -FCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV---MKKF---LKKLPIRWLAPETLNTGIF  339 (474)
T ss_pred             -HHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCccee---eccc---cccCcceecChhhhccCcc
Confidence             34557889999999999999999999999999999999999987654211   1110   0011234555666666777


Q ss_pred             CCCCChHHHHHHHHHHh
Q 013944          396 RPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       396 ~~~~d~~~~~~~l~~~l  412 (433)
                      ++.+|+++|+--+.++.
T Consensus       340 s~kTDV~sfGV~~~Eif  356 (474)
T KOG0194|consen  340 SFKTDVWSFGVLLWEIF  356 (474)
T ss_pred             ccccchhheeeeEEeee
Confidence            77888887665444443

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.63  E-value=6.3e-16  Score=147.19  Aligned_cols=150  Identities=17%  Similarity=0.164  Sum_probs=96.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||..++........                                   +.++.
T Consensus         6 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~-----------------------------------~~~~~   50 (267)
T cd08228           6 IEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKA-----------------------------------RQDCV   50 (267)
T ss_pred             eeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHH-----------------------------------HHHHH
Confidence            456799999999999995 589999999765421100000                                   00111


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +.   +-.+++++..+  ....+++|||++|++|.+++.......    ..+++..        ...+
T Consensus        51 ~e~~~l~~----l~---h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~----~~~~~~~--------~~~~  111 (267)
T cd08228          51 KEIDLLKQ----LN---HPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQK----RLIPERT--------VWKY  111 (267)
T ss_pred             HHHHHHHh----CC---CcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhcc----CCCCHHH--------HHHH
Confidence            12221111    11   12233333222  245689999999999998875321100    0011111        1234


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.++|+.|++|+|++|.||+++.++.++++|||++..+..
T Consensus       112 ~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228         112 FVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             HHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            55678899999999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.63  E-value=6e-15  Score=138.14  Aligned_cols=145  Identities=26%  Similarity=0.360  Sum_probs=99.6

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..++||+|++|.||+|... +|+.|++|+.+......    ...                                  +.
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~----------------------------------~~   45 (253)
T cd05122           4 ILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEK----KEK----------------------------------II   45 (253)
T ss_pred             eeeeeccCCceEEEEEEECCCCcEEEEEEecccchhH----HHH----------------------------------HH
Confidence            4568999999999999964 78999999987654311    000                                  01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +. .+  .+++.+..  .....+++|||++|++|.+++.....       ..++..        ...+
T Consensus        46 ~e~~~l~~----l~-~~--~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~-------~~~~~~--------~~~i  103 (253)
T cd05122          46 NEIQILKK----CK-HP--NIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQ-------TLTESQ--------IAYV  103 (253)
T ss_pred             HHHHHHHh----CC-CC--CEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCC-------CCCHHH--------HHHH
Confidence            12222211    11 12  23333332  23567999999999999998865320       011111        1225


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..++.++|..|++|+|++|+||++++++.++|+|||.+......
T Consensus       104 ~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122         104 CKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             HHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            566778999999999999999999999999999999999998887654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=3.9e-15  Score=142.64  Aligned_cols=145  Identities=23%  Similarity=0.365  Sum_probs=97.6

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|+||+|+. .+|+.||||+.+........   ..                                  +..
T Consensus         6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~---~~----------------------------------~~~   48 (277)
T cd06917           6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDV---SD----------------------------------IQR   48 (277)
T ss_pred             hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhH---HH----------------------------------HHH
Confidence            45799999999999995 68999999988654322110   00                                  112


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.++..  ..++++  .+.+.  .-.+..+++|||++|++|.+++... ..        ++..        ...+.
T Consensus        49 e~~~l~~l~~--~~~~~v--i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~l--------~~~~--------~~~i~  107 (277)
T cd06917          49 EVALLSQLRQ--SQPPNI--TKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG-PI--------AEKY--------ISVII  107 (277)
T ss_pred             HHHHHHHhcc--CCCCCe--eeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc-CC--------CHHH--------HHHHH
Confidence            2222222221  112222  22222  2235679999999999999887532 11        1111        12345


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .++..++.++|..|++|+|++|.||+++.++.++++|||.+..+..
T Consensus       108 ~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06917         108 REVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ  153 (277)
T ss_pred             HHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence            6688899999999999999999999999999999999999877644

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.63  E-value=1.6e-15  Score=146.23  Aligned_cols=147  Identities=18%  Similarity=0.104  Sum_probs=96.2

Q ss_pred             CccccccccceeEEEEe-----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          162 EEPVAAASFGQVYRGST-----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      .+.||+|++|.||+|+.     .++..||+|..++........+                                    
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~------------------------------------   52 (284)
T cd05079           9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD------------------------------------   52 (284)
T ss_pred             ceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHH------------------------------------
Confidence            45699999999999974     3678999999876543221111                                    


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       +..|...+.+    +.+.+-+.+....... ....++||||++|++|.+++......       .+..      ..  .
T Consensus        53 -~~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~-------~~~~------~~--~  112 (284)
T cd05079          53 -LKKEIEILRN----LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNK-------INLK------QQ--L  112 (284)
T ss_pred             -HHHHHHHHHh----CCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCC-------CCHH------HH--H
Confidence             1112222221    2222222222222221 13468999999999999987543110       1111      11  1


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.++|+.|++|+|+||.||+++.++.++|+|||++..+..
T Consensus       113 ~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05079         113 KYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  161 (284)
T ss_pred             HHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence            2455678899999999999999999999999999999999999887643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.63  E-value=8.8e-16  Score=147.69  Aligned_cols=141  Identities=21%  Similarity=0.289  Sum_probs=97.1

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchh-----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRH-----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~-----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|++|+||+|..+ +|+.||+|+.......     .+..++.+++       .                      
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~-------~----------------------   56 (286)
T cd07846           6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLK-------Q----------------------   56 (286)
T ss_pred             eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHH-------h----------------------
Confidence            467999999999999974 6899999986533211     1111221111       1                      


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                          ..+.|+.++.+.+...             ...++||||++|+.+.++.....+.+        ..+       . .
T Consensus        57 ----l~h~~i~~~~~~~~~~-------------~~~~lv~e~~~~~~l~~~~~~~~~~~--------~~~-------~-~  103 (286)
T cd07846          57 ----LRHENLVNLIEVFRRK-------------KRLYLVFEFVDHTVLDDLEKYPNGLD--------ESR-------V-R  103 (286)
T ss_pred             ----cCCcchhhHHHhcccC-------------CeEEEEEecCCccHHHHHHhccCCCC--------HHH-------H-H
Confidence                1234555555555333             23499999999998887664322111        111       1 2


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||+.|++|+|++|+||++++++.++++|||++..+..
T Consensus       104 ~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07846         104 KYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  152 (286)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence            2455678899999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.63  E-value=2.1e-15  Score=142.66  Aligned_cols=147  Identities=18%  Similarity=0.132  Sum_probs=96.3

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||.|++|.||++.. .+|+.||+|..+......   +....                                  ..
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~~~~~----------------------------------~~   47 (255)
T cd08219           5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS---AVEDS----------------------------------RK   47 (255)
T ss_pred             EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH---HHHHH----------------------------------HH
Confidence            46899999999999995 588999999875321111   00000                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+.    .+.+.+-+.+...+ ......+++|||++|++|.+++....+..      +++..        ...+..+
T Consensus        48 e~~~l~----~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~~------~~~~~--------~~~~~~~  108 (255)
T cd08219          48 EAVLLA----KMKHPNIVAFKESF-EADGHLYIVMEYCDGGDLMQKIKLQRGKL------FPEDT--------ILQWFVQ  108 (255)
T ss_pred             HHHHHH----hCCCCCcceEEEEE-EECCEEEEEEeeCCCCcHHHHHHhccCCC------CCHHH--------HHHHHHH
Confidence            222111    12222212222222 23456799999999999988876432211      11111        1224556


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++.++|..|++|+|++|.||++++++.++++|||.+..+..
T Consensus       109 i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  152 (255)
T cd08219         109 MCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS  152 (255)
T ss_pred             HHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecc
Confidence            78899999999999999999999999999999999999876643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.63  E-value=8.2e-16  Score=166.05  Aligned_cols=195  Identities=19%  Similarity=0.219  Sum_probs=129.6

Q ss_pred             CccccccccceeEEEEec--CCC----EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL--DGS----IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~--~G~----~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ...||+|.||.||+|...  +|.    .||||.+++....                                     .++
T Consensus       697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~-------------------------------------~~~  739 (1025)
T KOG1095|consen  697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSE-------------------------------------QEV  739 (1025)
T ss_pred             eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCH-------------------------------------HHH
Confidence            458999999999999964  443    4899988765443                                     234


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      .||.+||..|..|.    +.+-+..--|-.. .+..++++|||+||+|..+++..+..... .      ..+. .+.++.
T Consensus       740 ~~Fl~Ea~~m~~f~----HpNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~-~------~~L~-~~dLl~  806 (1025)
T KOG1095|consen  740 SDFLKEALLMSKFD----HPNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQ-P------SNLS-MRDLLA  806 (1025)
T ss_pred             HHHHHHHHHHhcCC----CcceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCC-C------CCCC-HHHHHH
Confidence            56788888886652    2222222222222 57779999999999999999876433211 0      1111 123333


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHH-HHHHhcCC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLV-HSLTEMDV  394 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~-~~l~~~g~  394 (433)
                       ++.+|+.+++||++++||||||-..|+|++....+||.||||++.+-...-...-.-  +.+  -...|+ +.+.+ |.
T Consensus       807 -~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~--a~l--PvkWm~PEsl~d-~i  880 (1025)
T KOG1095|consen  807 -FALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGE--AML--PVKWMPPESLKD-GI  880 (1025)
T ss_pred             -HHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCc--ccc--ceecCCHHHHhh-cc
Confidence             566789999999999999999999999999999999999999995533221100000  000  022333 34444 66


Q ss_pred             CCCCCChHHHHHHHHHHh
Q 013944          395 VRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l  412 (433)
                      .+.+.|+|+|+--+-+++
T Consensus       881 FtskSDvWsFGVllWEif  898 (1025)
T KOG1095|consen  881 FTSKSDVWSFGVLLWEIF  898 (1025)
T ss_pred             cccccchhhhHHHHHHHH
Confidence            677888888888887776

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.63  E-value=3.6e-15  Score=141.75  Aligned_cols=144  Identities=21%  Similarity=0.244  Sum_probs=97.9

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||.|++|.||+|...++..||+|+.+++....     .-                                  +..
T Consensus        10 ~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~-----~~----------------------------------~~~   50 (260)
T cd05073          10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-----EA----------------------------------FLA   50 (260)
T ss_pred             EEeEecCccceEEEEEEecCCccEEEEecCCChhHH-----HH----------------------------------HHH
Confidence            456899999999999997778889999887542210     00                                  111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+.    .+.+..-+.+......  ...+++|||++|++|.+++....+..            ..... .. .+..+
T Consensus        51 e~~~l~----~l~~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~------------~~~~~-~~-~~~~~  110 (260)
T cd05073          51 EANVMK----TLQHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSK------------QPLPK-LI-DFSAQ  110 (260)
T ss_pred             HHHHHH----hcCCCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccc------------cCHHH-HH-HHHHH
Confidence            222211    1222222333333332  56699999999999999886432111            01111 11 24456


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++.++|+.|++|+|++|.||+++.++.++++|||.+..+.
T Consensus       111 l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  153 (260)
T cd05073         111 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE  153 (260)
T ss_pred             HHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeecc
Confidence            7889999999999999999999999999999999999987664

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.63  E-value=8.2e-16  Score=145.90  Aligned_cols=147  Identities=20%  Similarity=0.319  Sum_probs=97.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.|++|+.+.....  ..+..-+......++.+                         
T Consensus         4 ~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~e~~~~~~l-------------------------   56 (264)
T cd06626           4 RGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIKEIADEMKVLELL-------------------------   56 (264)
T ss_pred             eeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHHHHHHHHHHHHhC-------------------------
Confidence            457899999999999985 47899999997654322  11111111111111111                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       .+.|+.++.+.+             ......++|+||++|++|.+++......+        +.        ....+..
T Consensus        57 -~~~~i~~~~~~~-------------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~--------~~~~i~~  106 (264)
T cd06626          57 -KHPNLVKYYGVE-------------VHREKVYIFMEYCSGGTLEELLEHGRILD--------EH--------VIRVYTL  106 (264)
T ss_pred             -CCCChhheeeeE-------------ecCCEEEEEEecCCCCcHHHHHhhcCCCC--------hH--------HHHHHHH
Confidence             011222211111             12345699999999999999886432221        11        1122456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..++.++|+.|++|+|++|+||+++.++.++|+|||.+..+..
T Consensus       107 ~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~  151 (264)
T cd06626         107 QLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKN  151 (264)
T ss_pred             HHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCC
Confidence            678899999999999999999999999999999999999887654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.63  E-value=3e-15  Score=142.94  Aligned_cols=144  Identities=17%  Similarity=0.157  Sum_probs=94.4

Q ss_pred             cccccccceeEEEEec---CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          164 PVAAASFGQVYRGSTL---DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       164 pigsgS~gqVy~a~l~---~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .||+|+||.||+|+..   ++..+|+|..+.......                                     +.++..
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------------~~~~~~   44 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQE-------------------------------------QMKFLE   44 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHH-------------------------------------HHHHHH
Confidence            5899999999999864   346799998765432110                                     011222


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.++    . ++  .+++++..  ..+..++||||++|++|.+++........   ...        .......+.
T Consensus        45 E~~~l~~l----~-h~--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~---~~~--------~~~~~~~~~  106 (269)
T cd05087          45 EAQPYRSL----Q-HS--NLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAEL---MTP--------DPTTLQRMA  106 (269)
T ss_pred             HHHHHHhC----C-CC--CEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhccc---ccc--------cHHHHHHHH
Confidence            33332222    2 12  23333332  23557999999999999998864321100   000        011112245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+++.++.++|+.|++|+|+||.||+++.++.++++|||++...
T Consensus       107 ~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~  150 (269)
T cd05087         107 CEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNK  150 (269)
T ss_pred             HHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccc
Confidence            67788999999999999999999999999999999999988643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.63  E-value=4.5e-16  Score=147.28  Aligned_cols=140  Identities=20%  Similarity=0.242  Sum_probs=95.6

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|++|+||+|...++..+|+|..+.+....                                       -+|..|
T Consensus         9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~---------------------------------------~~~~~e   49 (256)
T cd05112           9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE---------------------------------------EDFIEE   49 (256)
T ss_pred             EeeecCcccceEEEEEEeCCCeEEEEECCCCCCCH---------------------------------------HHHHHH
Confidence            46799999999999997778899999887543210                                       001122


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .+.+.++    . ++  .+++.+..  .....+++|||++|++|.+++....+.       .++..       + ..+..
T Consensus        50 ~~~l~~l----~-~~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~-------~~~~~-------~-~~~~~  107 (256)
T cd05112          50 AQVMMKL----S-HP--KLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGK-------FSQET-------L-LGMCL  107 (256)
T ss_pred             HHHHHhC----C-CC--CeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccC-------CCHHH-------H-HHHHH
Confidence            2222222    1 12  23333322  235679999999999999887643211       11111       1 12344


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ++..++.++|+.|++|+|++|+||+++.++.++++|||++...
T Consensus       108 ~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~  150 (256)
T cd05112         108 DVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFV  150 (256)
T ss_pred             HHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeec
Confidence            5678999999999999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.63  E-value=2.8e-15  Score=144.20  Aligned_cols=139  Identities=22%  Similarity=0.317  Sum_probs=93.1

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+. .+|+.||+|+...+.......+                                     +.+
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~-------------------------------------~~~   48 (279)
T cd06619           6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQ-------------------------------------IMS   48 (279)
T ss_pred             eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHH-------------------------------------HHH
Confidence            35799999999999985 5889999998764422111100                                     111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +. +++  +.+++..  .....++||||++|++|..+...            ++.        ....+.
T Consensus        49 E~~~l~~----l~-h~~--iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------------~~~--------~~~~~~  101 (279)
T cd06619          49 ELEILYK----CD-SPY--IIGFYGAFFVENRISICTEFMDGGSLDVYRKI------------PEH--------VLGRIA  101 (279)
T ss_pred             HHHHHHh----CC-CCC--eeeEEEEEEECCEEEEEEecCCCCChHHhhcC------------CHH--------HHHHHH
Confidence            2222211    11 122  2222222  23456899999999988654211            111        112356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+++.++.++|+.|++|+|+||.||+++.++.++|+|||++..+..
T Consensus       102 ~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619         102 VAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             HHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence            6788899999999999999999999999999999999999876643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.63  E-value=1.1e-15  Score=148.15  Aligned_cols=140  Identities=22%  Similarity=0.269  Sum_probs=95.2

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      ..||+|++|.||++.. .+|..||||.........    ...+...+..+..                          ..
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~e~~~l~~--------------------------l~   77 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR----RELLFNEVVIMRD--------------------------YH   77 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHH----HHHHHHHHHHHHh--------------------------CC
Confidence            4699999999999985 478999999864322111    1111111111111                          12


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      +.|+..+.+.+...             ...+++|||++|++|.+++.... .        .+..       . ..+..++
T Consensus        78 h~~ii~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~~~~~~-l--------~~~~-------~-~~~~~qi  127 (292)
T cd06658          78 HENVVDMYNSYLVG-------------DELWVVMEFLEGGALTDIVTHTR-M--------NEEQ-------I-ATVCLSV  127 (292)
T ss_pred             CCcHHHHHHheecC-------------CeEEEEEeCCCCCcHHHHHhcCC-C--------CHHH-------H-HHHHHHH
Confidence            34555555544322             34499999999999998774321 1        1111       1 2345668


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++.++|+.|++|+|++|.||+++.++.++|+|||++..+
T Consensus       128 ~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (292)
T cd06658         128 LRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV  168 (292)
T ss_pred             HHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence            88999999999999999999999999999999999988654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.63  E-value=1.4e-15  Score=147.88  Aligned_cols=141  Identities=22%  Similarity=0.290  Sum_probs=95.2

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      ..||.|++|.||+|+. .+|+.||||+........    ...+..+...+..                          ..
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~----~~~~~~e~~~l~~--------------------------l~   76 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR----RELLFNEVVIMRD--------------------------YQ   76 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccch----HHHHHHHHHHHHh--------------------------CC
Confidence            4699999999999985 479999999875432111    0011111111111                          12


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      +.|+.++.+.+..             ....+++|||++|++|.+++.... .        ++.+       + ..+..++
T Consensus        77 hp~i~~~~~~~~~-------------~~~~~iv~e~~~~~~L~~~~~~~~-~--------~~~~-------~-~~~~~qi  126 (297)
T cd06659          77 HQNVVEMYKSYLV-------------GEELWVLMEFLQGGALTDIVSQTR-L--------NEEQ-------I-ATVCESV  126 (297)
T ss_pred             CCchhhhhhheee-------------CCeEEEEEecCCCCCHHHHHhhcC-C--------CHHH-------H-HHHHHHH
Confidence            3455555444322             234599999999999988764311 1        1111       1 2245667


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++.++|+.|++|+|++|+||+++.++.++|+|||++..+.
T Consensus       127 ~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~  168 (297)
T cd06659         127 LQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS  168 (297)
T ss_pred             HHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcc
Confidence            889999999999999999999999999999999999987554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.63  E-value=5.9e-16  Score=148.17  Aligned_cols=136  Identities=17%  Similarity=0.233  Sum_probs=94.0

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .+|+|+||+||+++. .+|+.+|+|+..+......  ++.                                        
T Consensus        23 ~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--e~~----------------------------------------   60 (267)
T PHA03390         23 KLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--EPM----------------------------------------   60 (267)
T ss_pred             eecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--hHH----------------------------------------
Confidence            379999999999995 5789999998764311100  000                                        


Q ss_pred             HHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                        ...   ...+++  .+++++..+  ....++||||++|++|.+++......+        +.        ....+..+
T Consensus        61 --~~~---~~~~h~--~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~--------~~--------~~~~~~~q  117 (267)
T PHA03390         61 --VHQ---LMKDNP--NFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLS--------EA--------EVKKIIRQ  117 (267)
T ss_pred             --HHH---HhhcCC--CEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCC--------HH--------HHHHHHHH
Confidence              000   011122  233344332  356799999999999999886543221        11        11235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCC-cEEEEecccccccCH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g-~l~l~DFGl~~~l~~  364 (433)
                      +..++.++|+.|++|+|++|+||+++.++ .++++|||++..+..
T Consensus       118 i~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~  162 (267)
T PHA03390        118 LVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT  162 (267)
T ss_pred             HHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC
Confidence            88899999999999999999999999988 999999999876653

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.63  E-value=2.3e-16  Score=151.74  Aligned_cols=145  Identities=20%  Similarity=0.214  Sum_probs=92.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+.+......-.  ...                                  +.
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~--~~~----------------------------------~~   47 (285)
T cd07861           4 KIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGV--PST----------------------------------AI   47 (285)
T ss_pred             EeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCc--hHH----------------------------------HH
Confidence            346799999999999996 47999999987643211000  000                                  01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    .   +..+++++..  .....++||||++| +|.+++.......     ..++.        ....+
T Consensus        48 ~e~~~l~~l----~---h~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~-----~~~~~--------~~~~~  106 (285)
T cd07861          48 REISLLKEL----Q---HPNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQ-----YMDAE--------LVKSY  106 (285)
T ss_pred             HHHHHHHhc----C---CCCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCC-----cCCHH--------HHHHH
Confidence            121111111    1   1122333322  23566999999985 7777664321100     01111        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++..+|.++|..|++|+|++|.||+++.+|.++|+|||++...
T Consensus       107 ~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  151 (285)
T cd07861         107 LYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAF  151 (285)
T ss_pred             HHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeec
Confidence            667888999999999999999999999999999999999988654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.63  E-value=2.9e-16  Score=152.27  Aligned_cols=154  Identities=18%  Similarity=0.218  Sum_probs=96.2

Q ss_pred             CCccccccccceeEEEEecC-------------C--CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHH
Q 013944          161 SEEPVAAASFGQVYRGSTLD-------------G--SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYA  225 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~-------------G--~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~  225 (433)
                      -.+.||+|+||.||+|+..+             +  ..||||+.++........+                         
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~-------------------------   63 (295)
T cd05097           9 LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARND-------------------------   63 (295)
T ss_pred             ehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHH-------------------------
Confidence            34679999999999997531             2  3589999887643321111                         


Q ss_pred             HHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhh
Q 013944          226 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLD  303 (433)
Q Consensus       226 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~  303 (433)
                                  |..|.+.+.++    .+   ..+++++..  .....++||||++|++|.+++......+......  .
T Consensus        64 ------------~~~ei~~l~~l----~h---~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~--~  122 (295)
T cd05097          64 ------------FLKEIKIMSRL----KN---PNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHAN--N  122 (295)
T ss_pred             ------------HHHHHHHHHhC----CC---CCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccc--c
Confidence                        12232222222    11   223333322  2356799999999999999886432100000000  0


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          304 RQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       304 ~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ....... .+. .+..+++.++.+||..|++|+|+||+||+++.++.++++|||++..+
T Consensus       123 ~~~~~~~-~~~-~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~  179 (295)
T cd05097         123 IPSVSIA-NLL-YMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNL  179 (295)
T ss_pred             CCcccHH-HHH-HHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEeccccccccc
Confidence            0001111 111 24557888999999999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.62  E-value=1.8e-15  Score=144.42  Aligned_cols=84  Identities=14%  Similarity=0.152  Sum_probs=62.4

Q ss_pred             ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC
Q 013944          270 KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG  349 (433)
Q Consensus       270 ~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g  349 (433)
                      ..+++|||++|++|.+++.......  ....++.        .....+..+++.++.++|+.|++|+|+||+||+++.++
T Consensus        80 ~~~~v~e~~~~~~l~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~  149 (272)
T cd05075          80 SPVVILPFMKHGDLHSFLLYSRLGD--CPQYLPT--------QMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM  149 (272)
T ss_pred             CcEEEEEeCCCCcHHHHHHHhcccC--CcccCCH--------HHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC
Confidence            4689999999999988774321100  0000111        11123556788899999999999999999999999999


Q ss_pred             cEEEEecccccccC
Q 013944          350 QIGFLDFGLLCRME  363 (433)
Q Consensus       350 ~l~l~DFGl~~~l~  363 (433)
                      .++++|||++..+.
T Consensus       150 ~~kl~Dfg~~~~~~  163 (272)
T cd05075         150 NVCVADFGLSKKIY  163 (272)
T ss_pred             CEEECCCCcccccC
Confidence            99999999988764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.62  E-value=3.4e-15  Score=148.33  Aligned_cols=46  Identities=20%  Similarity=0.247  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++..++.++|+.|++|+|+||.||+++.++.++++|||++..+
T Consensus       184 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~  229 (343)
T cd05103         184 YSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI  229 (343)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence            4567888999999999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.62  E-value=3.8e-16  Score=158.41  Aligned_cols=47  Identities=19%  Similarity=0.210  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.+||..|++|+|+||.||+++.++.++++|||+++.+.
T Consensus       244 ~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~  290 (401)
T cd05107         244 FSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIM  290 (401)
T ss_pred             HHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecc
Confidence            45578889999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.62  E-value=2.4e-16  Score=150.38  Aligned_cols=146  Identities=25%  Similarity=0.290  Sum_probs=95.7

Q ss_pred             CCccccccccceeEEEEec-CC---CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTL-DG---SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G---~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+.||+|+||.||+|+.+ +|   ..||+|..++........+                                    
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~------------------------------------   51 (267)
T cd05066           8 IEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRD------------------------------------   51 (267)
T ss_pred             eeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHH------------------------------------
Confidence            3568999999999999863 33   4799998876543211100                                    


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                       +..|...+.+    +.+..-+.+...+ ......+++|||++|++|.+++....+.       .+..+       . ..
T Consensus        52 -~~~e~~~l~~----l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~-------~~~~~-------~-~~  110 (267)
T cd05066          52 -FLSEASIMGQ----FDHPNIIHLEGVV-TKSKPVMIVTEYMENGSLDAFLRKHDGQ-------FTVIQ-------L-VG  110 (267)
T ss_pred             -HHHHHHHHHh----CCCCCcceEEEEE-ecCCccEEEEEcCCCCCHHHHHHhcCCC-------CCHHH-------H-HH
Confidence             1112222211    2222222222222 1235669999999999999988643211       11111       1 12


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.++|+.|++|+|+||+||+++.++.++++|||++..+.
T Consensus       111 i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066         111 MLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             HHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence            45567889999999999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.62  E-value=4.5e-15  Score=143.40  Aligned_cols=152  Identities=16%  Similarity=0.177  Sum_probs=95.8

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|++|.||+|..+      .+..||+|..........  ..                                 
T Consensus        10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~---------------------------------   54 (288)
T cd05061          10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE--RI---------------------------------   54 (288)
T ss_pred             eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHH--HH---------------------------------
Confidence            3568999999999999743      356899998764321110  00                                 


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                        ++.+|...+.+    +. ++  .+++.+..  .....+++|||++|++|.+++............ .+   .... ..
T Consensus        55 --~~~~e~~~l~~----l~-~~--~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~-~~---~~~~-~~  120 (288)
T cd05061          55 --EFLNEASVMKG----FT-CH--HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG-RP---PPTL-QE  120 (288)
T ss_pred             --HHHHHHHHHHh----CC-CC--CeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCC-CC---CCCH-HH
Confidence              11222222222    21 12  23333322  235679999999999999998653221100000 00   0000 11


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      + ..+..+++.++.++|+.|++|+|+||.||+++.++.++++|||+++.+
T Consensus       121 ~-~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~  169 (288)
T cd05061         121 M-IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI  169 (288)
T ss_pred             H-HHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccc
Confidence            1 224567888999999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.62  E-value=3.4e-15  Score=141.32  Aligned_cols=171  Identities=20%  Similarity=0.135  Sum_probs=106.8

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchh-hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRH-VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~-~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|.||++.. +|+.||+|+.+..... .+                                         
T Consensus         9 ~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~~~~-----------------------------------------   46 (254)
T cd05083           9 TLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTAQAF-----------------------------------------   46 (254)
T ss_pred             eeeeeeccCCCCceEeccc-CCCceEEEeecCcchHHHH-----------------------------------------
Confidence            3457899999999999974 7889999987643211 11                                         


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ..|...+.    .+.+..-+.+....  .....+++|||++|++|.+++....+..      .+...       . ..+.
T Consensus        47 ~~e~~~l~----~~~~~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~------~~~~~-------~-~~~~  106 (254)
T cd05083          47 LEETAVMT----KLHHKNLVRLLGVI--LHNGLYIVMELMSKGNLVNFLRTRGRAL------VSVIQ-------L-LQFS  106 (254)
T ss_pred             HHHHHHHH----hCCCCCcCeEEEEE--cCCCcEEEEECCCCCCHHHHHHhcCcCC------CCHHH-------H-HHHH
Confidence            11211111    12222222222222  2245689999999999999986432211      11111       1 1245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH----------HHHHHHHHHHHhcCHHHHHHH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ----------FAMLASIVHIVNGDWQSLVHS  388 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~----------~~~~~~~~~~~~~d~~~~~~~  388 (433)
                      .++..++.++|+.|++|+|++|+||+++.++.++|+|||.+........          ......-......|.++++..
T Consensus       107 ~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~  186 (254)
T cd05083         107 LDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVL  186 (254)
T ss_pred             HHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHH
Confidence            5678899999999999999999999999999999999998875432100          000000011234577888777


Q ss_pred             HHhc
Q 013944          389 LTEM  392 (433)
Q Consensus       389 l~~~  392 (433)
                      ++++
T Consensus       187 l~el  190 (254)
T cd05083         187 LWEV  190 (254)
T ss_pred             HHHH
Confidence            7775

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.62  E-value=2.6e-16  Score=150.07  Aligned_cols=144  Identities=22%  Similarity=0.281  Sum_probs=95.9

Q ss_pred             CCccccccccceeEEEEec-CCC---EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGS---IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~---~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+.||+|++|+||+|+.+ +|.   .||||..+++.......+                                    
T Consensus         9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~------------------------------------   52 (268)
T cd05063           9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQD------------------------------------   52 (268)
T ss_pred             EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHH------------------------------------
Confidence            4578999999999999964 443   799999876543211111                                    


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                       +..|.+-+    ..+.+.   .+.+++..  .....++||||++|++|.+++....+.       .+..+.        
T Consensus        53 -~~~e~~~l----~~l~h~---~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-------~~~~~~--------  109 (268)
T cd05063          53 -FLSEASIM----GQFSHH---NIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGE-------FSSYQL--------  109 (268)
T ss_pred             -HHHHHHHH----hcCCCC---CeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCC-------CCHHHH--------
Confidence             11222211    112222   22233322  224568999999999999988643211       111111        


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+..++..++.++|+.|++|+|+||.||+++.++.++++|||++....
T Consensus       110 ~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063         110 VGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence            1245567889999999999999999999999999999999999987664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.62  E-value=6.2e-15  Score=139.73  Aligned_cols=142  Identities=18%  Similarity=0.162  Sum_probs=94.2

Q ss_pred             cccccccceeEEEEec--C--CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          164 PVAAASFGQVYRGSTL--D--GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       164 pigsgS~gqVy~a~l~--~--G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .||.|++|+||+|+..  +  +..||+|..+.........                                     ++.
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~-------------------------------------~~~   44 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKK-------------------------------------EFL   44 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHH-------------------------------------HHH
Confidence            5899999999999852  2  3789999887543321000                                     011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .|...+.+    +.+..-+.+....  .....+++|||++|++|.+++......+        +..        ...+..
T Consensus        45 ~e~~~l~~----l~h~~iv~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~~~~  102 (257)
T cd05060          45 REASVMAQ----LDHPCIVRLIGVC--KGEPLMLVMELAPLGPLLKYLKKRREIP--------VSD--------LKELAH  102 (257)
T ss_pred             HHHHHHHh----cCCCCeeeEEEEE--cCCceEEEEEeCCCCcHHHHHHhCCCCC--------HHH--------HHHHHH
Confidence            12222211    2221112222221  2356799999999999999986433111        111        123456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..++.+||..|++|+|++|.||+++.++.++|+|||++..+..
T Consensus       103 qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~  147 (257)
T cd05060         103 QVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGA  147 (257)
T ss_pred             HHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeec
Confidence            678899999999999999999999999999999999999886643

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.62  E-value=3e-15  Score=146.10  Aligned_cols=160  Identities=16%  Similarity=0.171  Sum_probs=99.0

Q ss_pred             ccCCccccccccceeEEEEec--------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 013944          159 FISEEPVAAASFGQVYRGSTL--------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGK  230 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~--------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~  230 (433)
                      +.-.++||+|+||.||+|+..        ++..||+|+.++.....   +..-+                          
T Consensus        20 ~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~--------------------------   70 (307)
T cd05098          20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---DLSDL--------------------------   70 (307)
T ss_pred             eEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---HHHHH--------------------------
Confidence            455678999999999999742        23579999988653221   11000                          


Q ss_pred             HhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCch--hhhhh
Q 013944          231 GLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTH--LDRQK  306 (433)
Q Consensus       231 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~--~~~~~  306 (433)
                              ..|...+.+    +..+++  +++++..  .....+++|||+++++|.+++..............  .....
T Consensus        71 --------~~e~~~l~~----l~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~  136 (307)
T cd05098          71 --------ISEMEMMKM----IGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ  136 (307)
T ss_pred             --------HHHHHHHHH----hcCCCC--EeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence                    112222211    111222  2233322  23567999999999999999875432110000000  00011


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          307 LDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       307 ~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..... + .-+..+++.++.++|+.|++|+|+||+||+++.++.++|+|||.+..+.
T Consensus       137 l~~~~-~-~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~  191 (307)
T cd05098         137 LSFKD-L-VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH  191 (307)
T ss_pred             CCHHH-H-HHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccccc
Confidence            11111 1 1245677889999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.62  E-value=4.1e-15  Score=142.84  Aligned_cols=144  Identities=22%  Similarity=0.235  Sum_probs=95.2

Q ss_pred             CCccccccccceeEEEEe-cCCC----EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGS----IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~----~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|++|.||+|+. .+|+    +||||+.+.........+                                   
T Consensus        11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~-----------------------------------   55 (279)
T cd05109          11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKE-----------------------------------   55 (279)
T ss_pred             eeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHH-----------------------------------
Confidence            356899999999999985 4565    589998865433211111                                   


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                        +..|...+..    +. +++  ++..+.. .....+++|||+++++|.+++....+.       .++...        
T Consensus        56 --~~~e~~~l~~----~~-~~~--i~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~-------~~~~~~--------  111 (279)
T cd05109          56 --ILDEAYVMAG----VG-SPY--VCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDR-------IGSQDL--------  111 (279)
T ss_pred             --HHHHHHHHHh----cC-CCC--CceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCC-------CCHHHH--------
Confidence              1112222211    11 122  2222221 234568999999999999888643210       111111        


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+..++..++.++|+.|++|+|+||+||+++.++.++|+|||+++.+.
T Consensus       112 ~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109         112 LNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             HHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence            1245578889999999999999999999999999999999999987664

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.62  E-value=5.2e-15  Score=142.41  Aligned_cols=143  Identities=18%  Similarity=0.131  Sum_probs=95.4

Q ss_pred             CCccccccccceeEEEEe-----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGST-----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||.|+||+||.++.     .+|+.||+|+.+.........                                    
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------------------   51 (283)
T cd05080           8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTS------------------------------------   51 (283)
T ss_pred             eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHH------------------------------------
Confidence            346799999999988653     368899999987543221100                                    


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc---c-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY---L-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~---~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                       .+..|...+.+    +. ++  .+++.+..   . ....+++|||++|++|.+++.... .        ++.+      
T Consensus        52 -~~~~E~~~l~~----l~-h~--~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-l--------~~~~------  108 (283)
T cd05080          52 -GWKKEINILKT----LY-HE--NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK-L--------NLAQ------  108 (283)
T ss_pred             -HHHHHHHHHHh----CC-CC--CEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcC-C--------CHHH------
Confidence             01122222211    22 12  22333322   1 134689999999999999875321 1        1111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                        ...+..+++.++.+||+.|++|+|++|+||++++++.++++|||++..+..
T Consensus       109 --~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080         109 --LLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             --HHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence              123556788899999999999999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.62  E-value=2.5e-16  Score=162.14  Aligned_cols=138  Identities=19%  Similarity=0.195  Sum_probs=92.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |.....||+|++|.||+|+. .+++.||||....   .....++.+++                                
T Consensus       171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~iL~--------------------------------  215 (461)
T PHA03211        171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEARLLR--------------------------------  215 (461)
T ss_pred             eEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHHHHH--------------------------------
Confidence            44466899999999999996 4789999996431   11122222222                                


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                               ++    .+ +  +|.+++.  ......+|+||++. ++|.+++.....       .++      ...  ..
T Consensus       216 ---------~L----~H-p--nIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-------~l~------~~~--~~  263 (461)
T PHA03211        216 ---------RL----SH-P--AVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLR-------PLG------LAQ--VT  263 (461)
T ss_pred             ---------HC----CC-C--CCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCC-------CCC------HHH--HH
Confidence                     11    11 1  1222222  22356799999996 467766643211       011      111  12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..+|.+||..|++|+|+||+||+++.++.++|+|||+++.+.
T Consensus       264 ~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~  311 (461)
T PHA03211        264 AVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFAR  311 (461)
T ss_pred             HHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence            356678889999999999999999999999999999999999987654

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=8.3e-15  Score=137.90  Aligned_cols=146  Identities=21%  Similarity=0.271  Sum_probs=98.3

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..++||+|++|.||+|+. .+|+.|++|........  ..+...+                                  .
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~----------------------------------~   47 (254)
T cd06627           4 LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEALKSI----------------------------------M   47 (254)
T ss_pred             eeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHHHHH----------------------------------H
Confidence            357899999999999986 47899999988754321  0111111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    .+ ++  +++++.  ......+++|||++|++|.+++......+        +.        ....+
T Consensus        48 ~e~~~l~~l----~~-~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~--------~~--------~~~~~  104 (254)
T cd06627          48 QEIDLLKNL----KH-PN--IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFP--------ES--------LVAVY  104 (254)
T ss_pred             HHHHHHHhC----CC-CC--ccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCC--------HH--------HHHHH
Confidence            122222221    11 22  222221  22356799999999999999876432211        11        11224


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..++.++|+.|++|+|++|+||+++.++.++|+|||++......
T Consensus       105 ~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  152 (254)
T cd06627         105 VYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV  152 (254)
T ss_pred             HHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence            566778999999999999999999999999999999999999877543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.62  E-value=4.5e-16  Score=149.37  Aligned_cols=152  Identities=16%  Similarity=0.167  Sum_probs=95.1

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||.|++|+||+|+..      ++..||||+.+.........                                   
T Consensus        10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~-----------------------------------   54 (277)
T cd05062          10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERI-----------------------------------   54 (277)
T ss_pred             eeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHH-----------------------------------
Confidence            3567999999999999752      35789999876432211000                                   


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                        ++..|..-+.    .+. ++  .+++++..  ..+..++||||++|++|.+++..........    +........ .
T Consensus        55 --~~~~e~~~l~----~l~-~~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~----~~~~~~~~~-~  120 (277)
T cd05062          55 --EFLNEASVMK----EFN-CH--HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN----PVQAPPSLK-K  120 (277)
T ss_pred             --HHHHHHHHHH----hCC-CC--CeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCcccccc----ccccCCCHH-H
Confidence              0111222111    121 12  22333322  2356799999999999999886432110000    000000111 1


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      + ..+..+++.++.++|+.|++|+|+||.||+++.++.++++|||++..+
T Consensus       121 ~-~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~  169 (277)
T cd05062         121 M-IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI  169 (277)
T ss_pred             H-HHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCcccc
Confidence            1 124556788999999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.62  E-value=6.1e-16  Score=148.85  Aligned_cols=142  Identities=20%  Similarity=0.279  Sum_probs=94.2

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|++|.||+|+.+ +|+.||||+.+....     +.+..++++++       .                      
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~-------~----------------------   56 (288)
T cd07833           6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLR-------Q----------------------   56 (288)
T ss_pred             EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHH-------h----------------------
Confidence            467999999999999964 789999998764321     11222222221       0                      


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                          .++.|+..+.+.+.             .....+++|||++++.+..+.....+.+        +.        ...
T Consensus        57 ----l~~~~i~~~~~~~~-------------~~~~~~iv~e~~~~~~l~~~~~~~~~~~--------~~--------~~~  103 (288)
T cd07833          57 ----LRHENIVNLKEAFR-------------RKGRLYLVFEYVERTLLELLEASPGGLP--------PD--------AVR  103 (288)
T ss_pred             ----cCCCCeeehhheEE-------------ECCEEEEEEecCCCCHHHHHHhcCCCCC--------HH--------HHH
Confidence                01222222222221             1245699999999877766554322111        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .+..+++.++.+||..|++|+|++|+||+++.++.++|+|||++..+...
T Consensus       104 ~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~  153 (288)
T cd07833         104 SYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRAR  153 (288)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence            24566888999999999999999999999999999999999998876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.62  E-value=8e-16  Score=145.84  Aligned_cols=143  Identities=22%  Similarity=0.267  Sum_probs=98.8

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+.. +|+.|+||+.++........+                                     +..
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~-------------------------------------~~~   48 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQ-------------------------------------LLR   48 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHH-------------------------------------HHH
Confidence            468999999999999964 699999998876543211100                                     112


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.++.     ++  .+++.+..  .....+++|||++|++|.+++......+        +...        ..+.
T Consensus        49 e~~~l~~l~-----~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~~~--------~~~~  105 (264)
T cd06623          49 ELKTLRSCE-----SP--YVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIP--------EPVL--------AYIA  105 (264)
T ss_pred             HHHHHHhcC-----CC--CeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCC--------HHHH--------HHHH
Confidence            222222221     11  23333322  2356799999999999999986532221        1111        1245


Q ss_pred             HHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .++..++.++|. .|++|+|++|+||+++.++.++++|||++..+..
T Consensus       106 ~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~  152 (264)
T cd06623         106 RQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLEN  152 (264)
T ss_pred             HHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            567889999999 9999999999999999999999999999887653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.62  E-value=4.3e-15  Score=140.47  Aligned_cols=149  Identities=18%  Similarity=0.093  Sum_probs=95.2

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      -.+.+|.|++|.||+|+. .+|+.||+|.........  .+....                                  .
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~----------------------------------~   47 (257)
T cd08223           4 FVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR--RERKAA----------------------------------E   47 (257)
T ss_pred             EEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH--HHHHHH----------------------------------H
Confidence            356899999999999995 478999999875321110  000001                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .|...+    ..+.+..-+.+...+.......+++|||++|++|.+++....+.+      .++.+.        ..+..
T Consensus        48 ~e~~~l----~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~------l~~~~~--------~~~~~  109 (257)
T cd08223          48 QEAQLL----SQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKL------LPENQV--------VEWFV  109 (257)
T ss_pred             HHHHHH----HhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCC------CCHHHH--------HHHHH
Confidence            122111    122222222222222222334689999999999998886432211      111111        12445


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++..++.++|+.|++|+|++|.||+++.++.++|+|||++..+.
T Consensus       110 ~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~  153 (257)
T cd08223         110 QIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLE  153 (257)
T ss_pred             HHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEec
Confidence            67789999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.62  E-value=4.9e-16  Score=150.78  Aligned_cols=89  Identities=15%  Similarity=0.154  Sum_probs=64.4

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...+++|||++|++|.+++...........   ..........  ...+..++..++.++|+.|++|+|++|.||+++.+
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~  166 (296)
T cd05095          92 DPLCMITEYMENGDLNQFLSRHEPQEAAEK---ADVVTISYST--LIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN  166 (296)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcCccccccc---ccccccCHHH--HHHHHHHHHHHHHHHHHCCeecccCChheEEEcCC
Confidence            556999999999999998875432211000   0000111111  12356678889999999999999999999999999


Q ss_pred             CcEEEEeccccccc
Q 013944          349 GQIGFLDFGLLCRM  362 (433)
Q Consensus       349 g~l~l~DFGl~~~l  362 (433)
                      +.++++|||++..+
T Consensus       167 ~~~~l~dfg~~~~~  180 (296)
T cd05095         167 YTIKIADFGMSRNL  180 (296)
T ss_pred             CCEEeccCcccccc
Confidence            99999999998765

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.62  E-value=2.7e-15  Score=136.03  Aligned_cols=142  Identities=20%  Similarity=0.346  Sum_probs=100.2

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |-.-++||+||||.+|.|. ..+|++||||+-+..+.....                                       
T Consensus        17 y~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL---------------------------------------   57 (341)
T KOG1163|consen   17 YKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQL---------------------------------------   57 (341)
T ss_pred             eEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcch---------------------------------------
Confidence            3345689999999999998 579999999997765543100                                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       ..|++    +.+.++  ..+.+|.+.+..+  ...+|||+.+ |.+|.++......             .......  -
T Consensus        58 -~yEsk----vY~iL~--~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R-------------~ftmkTv--L  114 (341)
T KOG1163|consen   58 -LYESK----VYRILQ--GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSR-------------RFTMKTV--L  114 (341)
T ss_pred             -hHHHH----HHHHhc--cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhh-------------hhhHHhH--H
Confidence             11222    112222  3456777776654  4569999976 7899998875421             1112221  2


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEcc---CCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~---~g~l~l~DFGl~~~l  362 (433)
                      +++.|+..-++++|..+|+|||+||+|+|..-   -.++-++|||+++.+
T Consensus       115 MLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen  115 MLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY  164 (341)
T ss_pred             HHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence            45667778899999999999999999999853   368999999999876

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.62  E-value=1e-15  Score=152.01  Aligned_cols=165  Identities=19%  Similarity=0.274  Sum_probs=99.9

Q ss_pred             HHHhCCChhhhcc-ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhh-HHHHHHHHHHHHHHHHHHHhhcCCHH
Q 013944          146 EEELGSPVESFFS-FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHV-VVRDIYILRIGLGLLQKIAKRKSDLR  222 (433)
Q Consensus       146 ~~elg~~~~~~f~-~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~-~~~Dl~~l~~~~~~~~~~~~~~~~~~  222 (433)
                      ++|++..+.++.. |...+.||+|++|.||+|.. .+|+.||||+........ ....   +..++.+++.+        
T Consensus         3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~---~~~E~~~l~~l--------   71 (343)
T cd07880           3 RQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKR---AYRELRLLKHM--------   71 (343)
T ss_pred             hhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHH---HHHHHHHHHhc--------
Confidence            3444444433322 33467899999999999985 589999999875432110 0000   00111111111        


Q ss_pred             HHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchh
Q 013944          223 LYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHL  302 (433)
Q Consensus       223 ~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~  302 (433)
                                        ++.|+..+.+.+......       ......++||||+ |++|.+++... ..        +
T Consensus        72 ------------------~h~~iv~~~~~~~~~~~~-------~~~~~~~lv~e~~-~~~l~~~~~~~-~l--------~  116 (343)
T cd07880          72 ------------------KHENVIGLLDVFTPDLSL-------DRFHDFYLVMPFM-GTDLGKLMKHE-KL--------S  116 (343)
T ss_pred             ------------------CCCCccceeeeecCCccc-------cccceEEEEEecC-CCCHHHHHhcC-CC--------C
Confidence                              122333332222111110       1123458999999 67888776421 11        1


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          303 DRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       303 ~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +.        ....+..++..++.++|+.|++|+|++|+||+++.+|.++++|||++.....
T Consensus       117 ~~--------~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~  170 (343)
T cd07880         117 ED--------RIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS  170 (343)
T ss_pred             HH--------HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence            11        1123566788899999999999999999999999999999999999886543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.62  E-value=2.5e-15  Score=144.21  Aligned_cols=143  Identities=23%  Similarity=0.290  Sum_probs=96.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|+||+|+. .+|+.||||+........   ...                                  ++.
T Consensus         8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~---~~~----------------------------------~~~   50 (277)
T cd06640           8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED---EIE----------------------------------DIQ   50 (277)
T ss_pred             hhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH---HHH----------------------------------HHH
Confidence            346799999999999996 478999999875322110   000                                  112


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|..-+.+    +.   +-.+++++..+  ....++||||++|++|.+++... ..        ++.+       + ..+
T Consensus        51 ~e~~~l~~----l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~-~l--------~~~~-------~-~~~  106 (277)
T cd06640          51 QEITVLSQ----CD---SPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG-PF--------DEFQ-------I-ATM  106 (277)
T ss_pred             HHHHHHHh----CC---CCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC-CC--------CHHH-------H-HHH
Confidence            22222211    21   22334444332  35679999999999999987532 11        1111       1 123


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.++|..|++|+|++|+||+++.+++++++|||++..+..
T Consensus       107 ~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06640         107 LKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             HHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence            45677899999999999999999999999999999999999876643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.62  E-value=4.8e-16  Score=150.28  Aligned_cols=158  Identities=19%  Similarity=0.187  Sum_probs=97.0

Q ss_pred             CccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|++|.||+|...      +...||+|+.+......   +...                                
T Consensus        17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~---~~~~--------------------------------   61 (293)
T cd05053          17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK---DLSD--------------------------------   61 (293)
T ss_pred             eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH---HHHH--------------------------------
Confidence            468999999999999863      23689999887543221   1100                                


Q ss_pred             hchHHHHHHHHHHHHhcCCCCC-eEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCC--chhhhhhhHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPF-IHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSS--THLDRQKLDAKWR  312 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~  312 (433)
                        +..|..-+.+    +.++++ +.+...+ ......+++|||+++++|.+++............  .......+.... 
T Consensus        62 --~~~E~~~l~~----l~~h~~i~~~~~~~-~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-  133 (293)
T cd05053          62 --LVSEMEMMKM----IGKHKNIINLLGVC-TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKD-  133 (293)
T ss_pred             --HHHHHHHHHh----hcCCCCeeeEEEEE-cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHH-
Confidence              1112221111    111222 2222222 2235679999999999999998653211100000  000001111111 


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      + ..+..+++.++.+||+.|++|+|++|.||+++.++.++++|||++..+.
T Consensus       134 ~-~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  183 (293)
T cd05053         134 L-VSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIH  183 (293)
T ss_pred             H-HHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccc
Confidence            1 2245678889999999999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.62  E-value=6.3e-16  Score=150.73  Aligned_cols=146  Identities=17%  Similarity=0.152  Sum_probs=95.8

Q ss_pred             CCccccccccceeEEEEe------cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGST------LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l------~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||.|++|+||+|+.      .++..||||+.+........   ..+                              
T Consensus        39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~------------------------------   85 (302)
T cd05055          39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER---EAL------------------------------   85 (302)
T ss_pred             EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH---HHH------------------------------
Confidence            456899999999999974      13568999988754332110   011                              


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                          ..|...+.++    .+++  .+.+.+.  ......+++|||+.|++|.+++.......      .+..+       
T Consensus        86 ----~~E~~~l~~l----~~h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~------l~~~~-------  142 (302)
T cd05055          86 ----MSELKIMSHL----GNHE--NIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESF------LTLED-------  142 (302)
T ss_pred             ----HHHHHHHHhc----cCCC--CcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCC------CCHHH-------
Confidence                1122222221    1111  1222222  22355699999999999999886432110      11111       


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      . ..+..+++.++.++|+.|++|+|++|+||+++.++.++++|||++..+.
T Consensus       143 ~-~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~  192 (302)
T cd05055         143 L-LSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIM  192 (302)
T ss_pred             H-HHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccccc
Confidence            1 2245678889999999999999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.62  E-value=1.1e-15  Score=152.39  Aligned_cols=76  Identities=25%  Similarity=0.365  Sum_probs=58.6

Q ss_pred             ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC
Q 013944          270 KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG  349 (433)
Q Consensus       270 ~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g  349 (433)
                      ..++||||++| +|.+.+...  .+        +.       . ...+..++..++.+||..|++|+|+||+||+++.+|
T Consensus        95 ~~~lv~e~~~~-~l~~~~~~~--l~--------~~-------~-~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~  155 (353)
T cd07850          95 DVYLVMELMDA-NLCQVIQMD--LD--------HE-------R-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC  155 (353)
T ss_pred             cEEEEEeccCC-CHHHHHhhc--CC--------HH-------H-HHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence            45899999975 666655321  11        11       1 123556788899999999999999999999999999


Q ss_pred             cEEEEecccccccCH
Q 013944          350 QIGFLDFGLLCRMER  364 (433)
Q Consensus       350 ~l~l~DFGl~~~l~~  364 (433)
                      .++|+|||++.....
T Consensus       156 ~~kL~Dfg~~~~~~~  170 (353)
T cd07850         156 TLKILDFGLARTAGT  170 (353)
T ss_pred             CEEEccCccceeCCC
Confidence            999999999987654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.61  E-value=1.5e-15  Score=149.17  Aligned_cols=145  Identities=20%  Similarity=0.218  Sum_probs=108.4

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+-+|+|.||.||+|.+ +++.||||+..+.-.+.+..+-.|.+..                               ..+
T Consensus       215 ~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy~lp-------------------------------~m~  262 (534)
T KOG3653|consen  215 LELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIYSLP-------------------------------GMK  262 (534)
T ss_pred             HHHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHHhcc-------------------------------Ccc
Confidence            34699999999999998 6699999999877777666665554410                               347


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      +.|+.+|...-+....         ...+.+||+||-+.|+|.+++...       ...|.+..         . ++..+
T Consensus       263 h~nIl~Fi~~ekr~t~---------~~~eywLVt~fh~kGsL~dyL~~n-------tisw~~~c---------r-ia~Sm  316 (534)
T KOG3653|consen  263 HENILQFIGAEKRGTA---------DRMEYWLVTEFHPKGSLCDYLKAN-------TISWNSLC---------R-IAESM  316 (534)
T ss_pred             chhHHHhhchhccCCc---------cccceeEEeeeccCCcHHHHHHhc-------cccHHHHH---------H-HHHHH
Confidence            7899998654332221         122458999999999999999743       12232221         1 33446


Q ss_pred             HHHHHHHHHC---------CccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          322 EATLVQLLET---------GILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       322 ~~~l~~lh~~---------givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+|.|||+.         +|.|||+|..||||..|++.+|+|||++..+++
T Consensus       317 arGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p  368 (534)
T KOG3653|consen  317 ARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEP  368 (534)
T ss_pred             HHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecC
Confidence            6799999973         699999999999999999999999999998864

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.61  E-value=1.3e-15  Score=147.29  Aligned_cols=155  Identities=19%  Similarity=0.190  Sum_probs=95.9

Q ss_pred             CccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|+||.||+|+..      .+..|++|+.+......   +...                                
T Consensus         5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~--------------------------------   49 (290)
T cd05045           5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSS---ELRD--------------------------------   49 (290)
T ss_pred             cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHH---HHHH--------------------------------
Confidence            467999999999999852      23679999887544321   1111                                


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCC----------Cchhh
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGS----------STHLD  303 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~----------~~~~~  303 (433)
                        +.+|..-+..    +. ++  .+.+.+..  .....+++|||++|++|.+++...........          .....
T Consensus        50 --~~~E~~~l~~----l~-h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (290)
T cd05045          50 --LLSEFNLLKQ----VN-HP--HVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD  120 (290)
T ss_pred             --HHHHHHHHhh----CC-CC--CEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCcc
Confidence              1112221111    11 12  22233322  33567999999999999998864321110000          00000


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          304 RQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       304 ~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ...+....  ...+..+++.++.+||+.|++|+|++|.||+++.++.++|+|||++..+
T Consensus       121 ~~~l~~~~--~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~  177 (290)
T cd05045         121 ERALTMGD--LISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDV  177 (290)
T ss_pred             ccccCHHH--HHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccc
Confidence            01111111  1235667889999999999999999999999999999999999998755

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.61  E-value=5e-15  Score=139.63  Aligned_cols=142  Identities=22%  Similarity=0.255  Sum_probs=94.4

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      +.||.|++|.||+|...+|+.||+|..+........   .-                                  +..|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~---~~----------------------------------~~~e~   43 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLK---RK----------------------------------FLQEA   43 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHH---HH----------------------------------HHHHH
Confidence            368999999999999766999999987643322100   00                                  11122


Q ss_pred             HHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ..+.    .+. +++  +++++.  ......++||||++|++|.+++.....       ..+..       .+. -+..+
T Consensus        44 ~~l~----~l~-~~~--i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~-------~~~~~-------~~~-~~~~~  101 (251)
T cd05041          44 EILK----QYD-HPN--IVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKN-------RLTVK-------KLL-QMSLD  101 (251)
T ss_pred             HHHH----hCC-CCC--eEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCC-------CCCHH-------HHH-HHHHH
Confidence            2111    122 222  222222  234567999999999999998854221       01111       111 13445


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++.++|+.|++|+|++|.||+++.++.++|+|||++....
T Consensus       102 ~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041         102 AAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEE  144 (251)
T ss_pred             HHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence            6778999999999999999999999999999999999987554

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.61  E-value=1.4e-15  Score=146.77  Aligned_cols=156  Identities=21%  Similarity=0.257  Sum_probs=96.4

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ....||.|+||+||+|+..      ++..||+|+.+.+.......+   +                              
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~---~------------------------------   55 (288)
T cd05050           9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD---F------------------------------   55 (288)
T ss_pred             ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHH---H------------------------------
Confidence            4568999999999999853      568899999875432211111   1                              


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCc--------hhhh
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST--------HLDR  304 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~--------~~~~  304 (433)
                          ..|...+.++    . ++  .+.+++..  .....+++|||++|++|.+++.............        ....
T Consensus        56 ----~~ei~~l~~l----~-h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  124 (288)
T cd05050          56 ----QREAALMAEF----D-HP--NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNP  124 (288)
T ss_pred             ----HHHHHHHHhc----C-CC--chheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccc
Confidence                1121111111    1 11  12222221  2245699999999999999987543211111000        0000


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          305 QKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       305 ~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..+.... . ..+..++..++.++|..|++|+|++|.||+++.++.++++|||++..+
T Consensus       125 ~~l~~~~-~-~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  180 (288)
T cd05050         125 LPLSCTE-Q-LCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI  180 (288)
T ss_pred             cccCHHH-H-HHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceec
Confidence            0011111 1 235667888999999999999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.61  E-value=9.4e-15  Score=138.71  Aligned_cols=148  Identities=22%  Similarity=0.267  Sum_probs=98.7

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||.|++|+||+|.. .+|..|++|+........   +...+.                                  
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~----------------------------------   47 (267)
T cd06610           5 LIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVDELR----------------------------------   47 (267)
T ss_pred             eeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHHHHH----------------------------------
Confidence            356899999999999995 478999999876432211   111111                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+..    +.+ +  .+++++.  ......+++|||++|++|.+++......+     ..++.        ....+
T Consensus        48 ~e~~~l~~----l~~-~--~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~-----~~~~~--------~~~~~  107 (267)
T cd06610          48 KEVQAMSQ----CNH-P--NVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRG-----GLDEA--------IIATV  107 (267)
T ss_pred             HHHHHHHh----cCC-C--CEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccC-----CCCHH--------HHHHH
Confidence            12221111    211 2  2233332  23456799999999999999986432100     01111        11234


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..++.+||+.|++|+|++|.||++++++.++|+|||++..+...
T Consensus       108 ~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~  155 (267)
T cd06610         108 LKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG  155 (267)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence            566788999999999999999999999999999999999998776543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.61  E-value=5e-15  Score=142.17  Aligned_cols=143  Identities=17%  Similarity=0.148  Sum_probs=94.1

Q ss_pred             ccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          165 VAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       165 igsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      ||+|+||.||+|.. .+|+.||+|+.......... +                                  +-.+..|..
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~-~----------------------------------~~~~~~e~~   45 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRK-G----------------------------------EQMALNEKK   45 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhh-h----------------------------------hHHHHHHHH
Confidence            68999999999985 57999999987643211000 0                                  001112322


Q ss_pred             HHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      .+.++    . +++  +++.+.  ......+++|||++|++|.+++.......      +++..        ...+..++
T Consensus        46 ~l~~l----~-~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~~--------~~~~~~ql  104 (277)
T cd05577          46 ILEKV----S-SRF--IVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPG------FPEAR--------AIFYAAQI  104 (277)
T ss_pred             HHHhC----C-CCC--EeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCC------CCHHH--------HHHHHHHH
Confidence            22222    1 222  222222  22356799999999999998886543211      11111        12245567


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++.++|..|++|+|++|.||+++.++.++++|||.+..+.
T Consensus       105 ~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~  146 (277)
T cd05577         105 ICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELK  146 (277)
T ss_pred             HHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhc
Confidence            889999999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.61  E-value=3.9e-15  Score=143.24  Aligned_cols=80  Identities=16%  Similarity=0.074  Sum_probs=62.9

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...+++|||+++++|.+++....+.       .++..       . ..+..++..++.++|+.|++|+|++|.||+++.+
T Consensus        81 ~~~~~i~e~~~~gsL~~~l~~~~~~-------~~~~~-------~-~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~  145 (279)
T cd05111          81 ASLQLVTQLSPLGSLLDHVRQHRDS-------LDPQR-------L-LNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD  145 (279)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcccC-------CCHHH-------H-HHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC
Confidence            4458999999999999998643211       11111       1 2245678889999999999999999999999999


Q ss_pred             CcEEEEecccccccC
Q 013944          349 GQIGFLDFGLLCRME  363 (433)
Q Consensus       349 g~l~l~DFGl~~~l~  363 (433)
                      +.++++|||+++.+.
T Consensus       146 ~~~kl~Dfg~~~~~~  160 (279)
T cd05111         146 SIVQIADFGVADLLY  160 (279)
T ss_pred             CcEEEcCCccceecc
Confidence            999999999997654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.61  E-value=7.9e-15  Score=145.43  Aligned_cols=48  Identities=19%  Similarity=0.203  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..++.++|+.|++|+|+||.||+++.++.++|+|||++..+.
T Consensus       177 ~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~  224 (337)
T cd05054         177 SYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIY  224 (337)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcc
Confidence            356678899999999999999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.61  E-value=8.6e-15  Score=139.56  Aligned_cols=83  Identities=13%  Similarity=0.106  Sum_probs=62.4

Q ss_pred             eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc
Q 013944          271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ  350 (433)
Q Consensus       271 ~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~  350 (433)
                      .+++|||+++++|.+++.........  ...+..        ....+..++..++.++|+.|++|+|+||+||+++.++.
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~--~~~~~~--------~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~  151 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLP--EKLPLQ--------TLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMT  151 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCc--ccCCHH--------HHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCe
Confidence            58999999999999887543211100  001111        11235567888999999999999999999999999999


Q ss_pred             EEEEecccccccC
Q 013944          351 IGFLDFGLLCRME  363 (433)
Q Consensus       351 l~l~DFGl~~~l~  363 (433)
                      ++++|||+++.+.
T Consensus       152 ~kl~dfg~~~~~~  164 (273)
T cd05035         152 VCVADFGLSKKIY  164 (273)
T ss_pred             EEECCccceeecc
Confidence            9999999988654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.61  E-value=8.5e-16  Score=146.78  Aligned_cols=145  Identities=21%  Similarity=0.177  Sum_probs=94.5

Q ss_pred             CCccccccccceeEEEEecC----CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTLD----GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~----G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+.||.|++|.||+|+..+    ...|+||..+.........+                                    
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~------------------------------------   53 (270)
T cd05056          10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREK------------------------------------   53 (270)
T ss_pred             eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHH------------------------------------
Confidence            45789999999999998643    24699998765442211100                                    


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       +.+|...+.+    +.+.   .+.+.+.. .....+++|||+++++|.+++......       ++..        ...
T Consensus        54 -~~~e~~~l~~----~~h~---~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~--------~~~  110 (270)
T cd05056          54 -FLQEAYIMRQ----FDHP---HIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYS-------LDLA--------SLI  110 (270)
T ss_pred             -HHHHHHHHHh----CCCC---chhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCC-------CCHH--------HHH
Confidence             1112221111    1111   12222211 124568999999999999998643210       1111        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..+++.++.++|+.|++|+|++|.||+++.++.++++|||++..+..
T Consensus       111 ~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056         111 LYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             HHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence            3556788899999999999999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.61  E-value=7.3e-16  Score=147.13  Aligned_cols=84  Identities=19%  Similarity=0.214  Sum_probs=64.0

Q ss_pred             CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc
Q 013944          268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS  347 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~  347 (433)
                      ....++||||++|++|.+++....+....   .        ........+..++..++.++|+.|++|+|+||.||+++.
T Consensus        67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~---~--------~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~  135 (269)
T cd05042          67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQ---M--------AQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA  135 (269)
T ss_pred             CCceEEEEEeCCCCcHHHHHHhccccccc---c--------ccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC
Confidence            35679999999999999998654321100   0        001111235667888999999999999999999999999


Q ss_pred             CCcEEEEeccccccc
Q 013944          348 SGQIGFLDFGLLCRM  362 (433)
Q Consensus       348 ~g~l~l~DFGl~~~l  362 (433)
                      ++.++++|||++...
T Consensus       136 ~~~~kl~dfg~~~~~  150 (269)
T cd05042         136 DLSVKIGDYGLALEQ  150 (269)
T ss_pred             CCcEEEecccccccc
Confidence            999999999998653

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.61  E-value=9.4e-16  Score=147.08  Aligned_cols=142  Identities=20%  Similarity=0.146  Sum_probs=94.9

Q ss_pred             ccccccccceeEEEEec-----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          163 EPVAAASFGQVYRGSTL-----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~-----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +.||+|++|.||+|++.     +|+.||||+.++......   ...+                                 
T Consensus        10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~---~~~~---------------------------------   53 (284)
T cd05038          10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQH---RSDF---------------------------------   53 (284)
T ss_pred             eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHH---HHHH---------------------------------
Confidence            67999999999999853     478999999876543200   0011                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--c--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--L--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                       ..|...+.+    +.+ +  .+++++..  .  ....+++|||++|++|.+++.....             .+.... .
T Consensus        54 -~~ei~~l~~----l~~-~--~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~-------------~~~~~~-~  111 (284)
T cd05038          54 -EREIEILRT----LDH-E--NIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD-------------QINLKR-L  111 (284)
T ss_pred             -HHHHHHHHh----CCC-C--ChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCcc-------------ccCHHH-H
Confidence             112111111    111 1  12222221  1  2346999999999999998864321             011111 1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                       ..+..++..++.+||+.|++|+|++|.||+++.++.++++|||++..+.
T Consensus       112 -~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038         112 -LLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             -HHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence             1245667889999999999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.61  E-value=3.5e-16  Score=151.12  Aligned_cols=143  Identities=19%  Similarity=0.230  Sum_probs=93.7

Q ss_pred             cCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...++||+|++|.||+|+.+ +|+.||||..+.........                                     .+
T Consensus         8 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~-------------------------------------~~   50 (291)
T cd07844           8 KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPF-------------------------------------TA   50 (291)
T ss_pred             eEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCch-------------------------------------hH
Confidence            34578999999999999964 78999999876543211000                                     00


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.++    . +++  +.+++..  .....++||||++| +|.+++....+.       +.+.        ....
T Consensus        51 ~~E~~~l~~l----~-h~~--i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~-------~~~~--------~~~~  107 (291)
T cd07844          51 IREASLLKDL----K-HAN--IVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGG-------LSMH--------NVRL  107 (291)
T ss_pred             HHHHHHHhhC----C-Ccc--eeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCC-------CCHH--------HHHH
Confidence            1122222111    1 122  2233222  23456999999986 888876533210       1111        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++..++.++|+.|++|+|++|.||+++.+|.++++|||++...
T Consensus       108 ~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844         108 FLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             HHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECcccccccc
Confidence            4556788999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.61  E-value=9.3e-16  Score=146.64  Aligned_cols=81  Identities=17%  Similarity=0.136  Sum_probs=61.3

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...++||||++|++|.+++.......    ...        .......+..+++.++.++|+.|++|+|+||+||+++.+
T Consensus        68 ~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~--------~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~  135 (268)
T cd05086          68 IPYLLVFEYCELGDLKSYLSQEQWHR----RNS--------QLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD  135 (268)
T ss_pred             CccEEEEecCCCCcHHHHHHhhhccc----ccc--------cHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC
Confidence            34599999999999999886432110    000        001112345678889999999999999999999999999


Q ss_pred             CcEEEEecccccc
Q 013944          349 GQIGFLDFGLLCR  361 (433)
Q Consensus       349 g~l~l~DFGl~~~  361 (433)
                      +.++++|||++..
T Consensus       136 ~~~~l~Dfg~~~~  148 (268)
T cd05086         136 LTVKVGDYGIGPS  148 (268)
T ss_pred             ccEEecccccccc
Confidence            9999999998754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.61  E-value=1.9e-15  Score=146.63  Aligned_cols=144  Identities=18%  Similarity=0.281  Sum_probs=93.7

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.+|+|++|.||+|.. .+|..|++|+.........    ..+...+.++..                          
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~----~~~~~e~~~l~~--------------------------   72 (293)
T cd06647          23 RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKK----ELIINEILVMRE--------------------------   72 (293)
T ss_pred             eeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHH----HHHHHHHHHHhh--------------------------
Confidence            456899999999999985 5789999998642211100    000000000000                          


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ..+.|+.++.+.+             ......++||||++|++|.+++.... .+        ..       .+ ..+..
T Consensus        73 l~hp~i~~~~~~~-------------~~~~~~~lv~e~~~~~~L~~~~~~~~-l~--------~~-------~~-~~i~~  122 (293)
T cd06647          73 NKHPNIVNYLDSY-------------LVGDELWVVMEYLAGGSLTDVVTETC-MD--------EG-------QI-AAVCR  122 (293)
T ss_pred             cCCCCeeehhhee-------------eeCCcEEEEEecCCCCcHHHHHhhcC-CC--------HH-------HH-HHHHH
Confidence            0112222222221             12345699999999999998875321 11        11       11 23456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..++.+||+.|++|+|++|+||+++.++.++|+|||++..+..
T Consensus       123 ~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~  167 (293)
T cd06647         123 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (293)
T ss_pred             HHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence            678899999999999999999999999999999999998876644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.61  E-value=8.3e-16  Score=146.63  Aligned_cols=80  Identities=14%  Similarity=0.115  Sum_probs=60.8

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...+++|||+++++|..++....+.       .++..        ...+..+++.++.++|+.|++|+|++|.||+++.+
T Consensus        77 ~~~~lv~e~~~~~~l~~~~~~~~~~-------~~~~~--------~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~  141 (262)
T cd05077          77 VENIMVEEFVEFGPLDLFMHRKSDV-------LTTPW--------KFKVAKQLASALSYLEDKDLVHGNVCTKNILLARE  141 (262)
T ss_pred             CCCEEEEecccCCCHHHHHHhcCCC-------CCHHH--------HHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecC
Confidence            4679999999999998887543211       11111        12356678899999999999999999999999876


Q ss_pred             Cc-------EEEEecccccccC
Q 013944          349 GQ-------IGFLDFGLLCRME  363 (433)
Q Consensus       349 g~-------l~l~DFGl~~~l~  363 (433)
                      +.       ++++|||++..+.
T Consensus       142 ~~~~~~~~~~~l~d~g~~~~~~  163 (262)
T cd05077         142 GIDGECGPFIKLSDPGIPITVL  163 (262)
T ss_pred             CccCCCCceeEeCCCCCCcccc
Confidence            64       8999999886553

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.61  E-value=9e-16  Score=160.20  Aligned_cols=187  Identities=20%  Similarity=0.279  Sum_probs=126.7

Q ss_pred             CccccccccceeEEEE-ecCCCEEEEEEcCCCchh--hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          162 EEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRH--VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~--~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      .+.||.|.+|+||+++ .++|+.+|||++.|....  .++.+..+++.                                
T Consensus        24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~--------------------------------   71 (953)
T KOG0587|consen   24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKK--------------------------------   71 (953)
T ss_pred             EEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHh--------------------------------
Confidence            4579999999999999 579999999999987643  33333333331                                


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ...+.|..+|...+...        -..-....|||||||.||+.+|+.+...+.              ...+.++..+.
T Consensus        72 ~~~hpnv~~fyg~~~k~--------~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~--------------rl~E~~IaYI~  129 (953)
T KOG0587|consen   72 YSHHPNVATFYGAFIKK--------DPGNGDQLWLVMEFCGGGSVTDLVKNTKGN--------------RLKEEWIAYIL  129 (953)
T ss_pred             ccCCCCcceEEEEEEEe--------cCCCCCeEEEEeeccCCccHHHHHhhhccc--------------chhhHHHHHHH
Confidence            11222333332222110        012346779999999999999999764322              12334556677


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHH--HHHH-------HHH---------HHhc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFA--MLAS-------IVH---------IVNG  380 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~--~~~~-------~~~---------~~~~  380 (433)
                      +.++.++.+||...++|||+|-.|||++.+|.||++|||.+.+++....+.  .+.+       +++         -..-
T Consensus       130 re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~  209 (953)
T KOG0587|consen  130 REILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRS  209 (953)
T ss_pred             HHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCccccc
Confidence            888899999999999999999999999999999999999999987643321  1111       111         2345


Q ss_pred             CHHHHHHHHHhcCCCCC-CCChH
Q 013944          381 DWQSLVHSLTEMDVVRP-GTNTL  402 (433)
Q Consensus       381 d~~~~~~~l~~~g~~~~-~~d~~  402 (433)
                      |.|+++-.-++||-..| -.|.-
T Consensus       210 D~WsLGITaIEladG~PPl~DmH  232 (953)
T KOG0587|consen  210 DLWSLGITAIEMAEGAPPLCDMH  232 (953)
T ss_pred             chhhccceeehhcCCCCCccCcc
Confidence            67777777777776543 34544

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.61  E-value=1.8e-15  Score=144.27  Aligned_cols=150  Identities=18%  Similarity=0.202  Sum_probs=97.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhh-HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHV-VVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~-~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.+|+|++|.||+|.. .+|..|++|+.+...... .......+                                
T Consensus         4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~--------------------------------   51 (266)
T cd06651           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSAL--------------------------------   51 (266)
T ss_pred             ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHH--------------------------------
Confidence            34567899999999999986 579999999876432211 00111111                                


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                        ..|...+.+    +.+..-+.+...+... ....+++|||++|++|.+++......+        +..       . .
T Consensus        52 --~~e~~~l~~----l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~--------~~~-------~-~  109 (266)
T cd06651          52 --ECEIQLLKN----LQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALT--------ESV-------T-R  109 (266)
T ss_pred             --HHHHHHHHH----cCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HHH-------H-H
Confidence              222222222    2211112222222211 234589999999999999886432221        111       1 1


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..+++.++.++|+.|++|+|++|.||+++.++.++|+|||++..+
T Consensus       110 ~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651         110 KYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence            24567888999999999999999999999999999999999998755

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.61  E-value=1.1e-15  Score=148.48  Aligned_cols=142  Identities=19%  Similarity=0.271  Sum_probs=93.9

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.|+||..........    ..+                                  .
T Consensus        23 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~----~~~----------------------------------~   64 (296)
T cd06655          23 RYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKK----ELI----------------------------------I   64 (296)
T ss_pred             EEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchH----HHH----------------------------------H
Confidence            346799999999999985 6899999997643211110    000                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|...+..    +. +++  ++.++..  .....++||||++|++|.+++.... .+        +.+       . ..+
T Consensus        65 ~e~~~l~~----l~-h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-l~--------~~~-------~-~~i  120 (296)
T cd06655          65 NEILVMKE----LK-NPN--IVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETC-MD--------EAQ-------I-AAV  120 (296)
T ss_pred             HHHHHHHh----cC-CCc--eeeeeeeEecCceEEEEEEecCCCcHHHHHHhcC-CC--------HHH-------H-HHH
Confidence            11111111    11 121  2222221  2345699999999999998875321 11        111       1 124


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|++|.||+++.+|.++++|||++..+..
T Consensus       121 ~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~  167 (296)
T cd06655         121 CRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP  167 (296)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence            55677899999999999999999999999999999999999876643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.61  E-value=1.1e-15  Score=147.02  Aligned_cols=139  Identities=20%  Similarity=0.299  Sum_probs=93.5

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|++|.||+|+. .+|+.||+|+.+....     ..+..++.+++       .+                     
T Consensus         5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~-------~l---------------------   56 (284)
T cd07839           5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLK-------EL---------------------   56 (284)
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHH-------hc---------------------
Confidence            45799999999999996 5899999998754221     11222222222       11                     


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                           .+.|+.++.+.+.+.             ...+++|||++| +|.+++....+.       .++.        ...
T Consensus        57 -----~h~~i~~~~~~~~~~-------------~~~~lv~e~~~~-~l~~~~~~~~~~-------~~~~--------~~~  102 (284)
T cd07839          57 -----KHKNIVRLYDVLHSD-------------KKLTLVFEYCDQ-DLKKYFDSCNGD-------IDPE--------IVK  102 (284)
T ss_pred             -----CCCCeeeHHHHhccC-------------CceEEEEecCCC-CHHHHHHhcCCC-------CCHH--------HHH
Confidence                 123444444433322             345899999985 676665432110       1111        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..++..++.+||..|++|+|++|+||+++.++.++|+|||++..+
T Consensus       103 ~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~  149 (284)
T cd07839         103 SFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAF  149 (284)
T ss_pred             HHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhcc
Confidence            35667888999999999999999999999999999999999988754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.61  E-value=5.2e-15  Score=156.08  Aligned_cols=93  Identities=19%  Similarity=0.313  Sum_probs=64.2

Q ss_pred             CceEEEeeccCCCCcchhhhhccCC-CCCC-----CCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCc
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGS-SVDG-----SSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGN  342 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~-~~~~-----~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgN  342 (433)
                      ...+|||||+++++|.+++...... .+..     ....+  .........+..+..++..+|.|+|+.||+|||+||.|
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~--~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N  285 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLP--KGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN  285 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhcc--ccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence            4569999999999999988643210 0000     00000  00111122233466778899999999999999999999


Q ss_pred             eEEcc-CCcEEEEecccccccC
Q 013944          343 LRYTS-SGQIGFLDFGLLCRME  363 (433)
Q Consensus       343 ilv~~-~g~l~l~DFGl~~~l~  363 (433)
                      ||++. ++.++|+|||+++.+.
T Consensus       286 ILl~~~~~~~KL~DFGlA~~l~  307 (566)
T PLN03225        286 IIFSEGSGSFKIIDLGAAADLR  307 (566)
T ss_pred             EEEeCCCCcEEEEeCCCccccc
Confidence            99985 5899999999997653

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.61  E-value=6.8e-15  Score=141.56  Aligned_cols=142  Identities=20%  Similarity=0.125  Sum_probs=95.0

Q ss_pred             CccccccccceeEEEEe-----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          162 EEPVAAASFGQVYRGST-----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      .+.||+|+||.||+|..     .+|+.||||..+.......    ..+                                
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~----~~~--------------------------------   52 (284)
T cd05081           9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL----RDF--------------------------------   52 (284)
T ss_pred             eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH----HHH--------------------------------
Confidence            46799999999999974     3688999999765432211    111                                


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc---c-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY---L-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~---~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                        ..|.+-+.+    +.+ ++  +++.+..   . ....++||||++|++|.+++....+.       .+..      . 
T Consensus        53 --~~e~~~l~~----l~h-~~--iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------l~~~------~-  109 (284)
T cd05081          53 --EREIEILKS----LQH-DN--IVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRER-------LDHR------K-  109 (284)
T ss_pred             --HHHHHHHHh----CCC-CC--eeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcC-------CCHH------H-
Confidence              112222211    221 22  2222221   1 13468999999999999988643210       0111      1 


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                       ...+..++..++.+||+.|++|+|+||+||+++.+++++|+|||++..+.
T Consensus       110 -~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  159 (284)
T cd05081         110 -LLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP  159 (284)
T ss_pred             -HHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence             12245677889999999999999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.61  E-value=1.7e-14  Score=130.32  Aligned_cols=141  Identities=23%  Similarity=0.313  Sum_probs=97.7

Q ss_pred             ccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          165 VAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       165 igsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      ||+|++|+||+++.. +|++++||+.++.....   ....                                  +..|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~----------------------------------~~~e~~   43 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS---LLEE----------------------------------LLREIE   43 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh---HHHH----------------------------------HHHHHH
Confidence            689999999999964 49999999988765431   0000                                  112222


Q ss_pred             HHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .+.++    .+   ..+++++....  +..+++|||++|++|.+++.... ..+        ...       . ..+..+
T Consensus        44 ~~~~l----~~---~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~--------~~~-------~-~~~~~~  100 (215)
T cd00180          44 ILKKL----NH---PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLS--------EDE-------I-LRILLQ  100 (215)
T ss_pred             HHHhc----CC---CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCC--------HHH-------H-HHHHHH
Confidence            22222    11   34444444333  57899999999999999876431 111        111       1 124456


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEcc-CCcEEEEecccccccCHH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l~~~  365 (433)
                      +..++.++|..|++|+|++|+||++++ +++++++|||.+......
T Consensus       101 l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180         101 ILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             HHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence            778899999999999999999999999 899999999999877554

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.61  E-value=6.1e-16  Score=159.49  Aligned_cols=178  Identities=20%  Similarity=0.254  Sum_probs=122.6

Q ss_pred             HhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEec-CC---CEEEEEEcCCCchhhHHHHHHHH
Q 013944          129 LHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTL-DG---SIVAVKVQRPNLRHVVVRDIYIL  204 (433)
Q Consensus       129 lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~-~G---~~VAVKv~~p~~~~~~~~Dl~~l  204 (433)
                      ...-+.|+.+++.-+.+ +|+-+.++--+- ..++.||+|.||.|++|+++ .|   ..||||.++.+-.+...      
T Consensus       603 ~k~YiDP~TYEDPnqAv-reFakEId~s~i-~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekqr------  674 (996)
T KOG0196|consen  603 TKTYIDPHTYEDPNQAV-REFAKEIDPSCV-KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQR------  674 (996)
T ss_pred             ceeecCCccccCccHHH-HHhhhhcChhhe-EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHH------
Confidence            34455666665544443 233333222211 23568999999999999985 33   67999999988766433      


Q ss_pred             HHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcc
Q 013944          205 RIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT  284 (433)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~  284 (433)
                                                     .||..||.-+-+|    .+.+-++.--|+ .-+.+.++++|||++++|+
T Consensus       675 -------------------------------rdFL~EAsIMGQF----dHPNIIrLEGVV-Tks~PvMIiTEyMENGsLD  718 (996)
T KOG0196|consen  675 -------------------------------RDFLSEASIMGQF----DHPNIIRLEGVV-TKSKPVMIITEYMENGSLD  718 (996)
T ss_pred             -------------------------------hhhhhhhhhcccC----CCCcEEEEEEEE-ecCceeEEEhhhhhCCcHH
Confidence                                           3456677655443    333333333333 2346678999999999999


Q ss_pred             hhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          285 DLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       285 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+++...|.-             ... ++. -+.++|+++++||-+.|++||||-..||||+.+-..|+.|||+++.+.+
T Consensus       719 sFLR~~DGqf-------------tvi-QLV-gMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvled  783 (996)
T KOG0196|consen  719 SFLRQNDGQF-------------TVI-QLV-GMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  783 (996)
T ss_pred             HHHhhcCCce-------------Eee-hHH-HHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeeccc
Confidence            9998765420             000 122 2567899999999999999999999999999999999999999998854


Q ss_pred             H
Q 013944          365 K  365 (433)
Q Consensus       365 ~  365 (433)
                      +
T Consensus       784 d  784 (996)
T KOG0196|consen  784 D  784 (996)
T ss_pred             C
Confidence            4

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.60  E-value=1.4e-15  Score=143.14  Aligned_cols=146  Identities=21%  Similarity=0.260  Sum_probs=98.5

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|... +|+.|++|+.+.....  ......+.                                  
T Consensus         4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~----------------------------------   47 (260)
T cd06606           4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS--EEELEALE----------------------------------   47 (260)
T ss_pred             eeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc--hHHHHHHH----------------------------------
Confidence            4578999999999999964 7999999988654321  00111111                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      .|...+.+    +. +++  +.+++..  ..  ...+++|||++|++|.+++......+        +..       . .
T Consensus        48 ~e~~~l~~----l~-~~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~~-------~-~  104 (260)
T cd06606          48 REIRILSS----LQ-HPN--IVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLP--------EPV-------I-R  104 (260)
T ss_pred             HHHHHHHH----cC-CCC--EeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCC--------HHH-------H-H
Confidence            12112211    11 122  2222221  22  46799999999999999886543211        111       1 1


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .+..++..++.+||+.|++|+|++|.||++++++.++|+|||.+......
T Consensus       105 ~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606         105 KYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            24556778999999999999999999999999999999999998877654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.60  E-value=5.2e-15  Score=142.14  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=59.7

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...++||||++|++|.+++....+.       .+...      .  ..+..+++.++.++|+.|++|+|+||.||+++.+
T Consensus        89 ~~~~lv~ey~~~g~L~~~l~~~~~~-------~~~~~------~--~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~  153 (274)
T cd05076          89 SENIMVEEFVEHGPLDVCLRKEKGR-------VPVAW------K--ITVAQQLASALSYLEDKNLVHGNVCAKNILLARL  153 (274)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCC-------CCHHH------H--HHHHHHHHHHHHHHHcCCccCCCCCcccEEEecc
Confidence            5679999999999998887643211       11111      1  1356678899999999999999999999999764


Q ss_pred             C-------cEEEEeccccccc
Q 013944          349 G-------QIGFLDFGLLCRM  362 (433)
Q Consensus       349 g-------~l~l~DFGl~~~l  362 (433)
                      |       .++++|||.+...
T Consensus       154 ~~~~~~~~~~kl~d~g~~~~~  174 (274)
T cd05076         154 GLAEGTSPFIKLSDPGVSFTA  174 (274)
T ss_pred             CcccCccceeeecCCcccccc
Confidence            3       4899999987544

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.60  E-value=5.3e-15  Score=140.88  Aligned_cols=146  Identities=19%  Similarity=0.223  Sum_probs=96.2

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhh-HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHV-VVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~-~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+.||+|++|.||+|.. .+|+.||||+.+...... ....+..                                  +
T Consensus         6 ~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~----------------------------------~   51 (265)
T cd06652           6 LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNA----------------------------------L   51 (265)
T ss_pred             EeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHH----------------------------------H
Confidence            356799999999999996 579999999875322110 0001111                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      ..|...+.++    . ++  .+++.+..+    ....+++|||++|++|.+++......+        +...        
T Consensus        52 ~~E~~~l~~l----~-h~--~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~--------~~~~--------  108 (265)
T cd06652          52 ECEIQLLKNL----L-HE--RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALT--------ENVT--------  108 (265)
T ss_pred             HHHHHHHHhc----C-CC--CeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCC--------HHHH--------
Confidence            2233333332    1 12  223333222    234579999999999999876432211        1111        


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+..++..++.++|+.|++|+|++|.||++++++.++|+|||++..+.
T Consensus       109 ~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~  157 (265)
T cd06652         109 RKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ  157 (265)
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence            1245567889999999999999999999999999999999999887553

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.60  E-value=1.8e-15  Score=149.66  Aligned_cols=144  Identities=17%  Similarity=0.235  Sum_probs=94.7

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchh-----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||.|++|.||+|+. .+|+.||+|+.......     .+..++.+++       .+                    
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~-------~l--------------------   61 (334)
T cd07855           9 PIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILR-------HF--------------------   61 (334)
T ss_pred             eeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHH-------hc--------------------
Confidence            356899999999999995 57999999987643211     1111111111       11                    


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                            .+.|+.++.+.+....         ......++||||+.| +|.+++......+        +.        ..
T Consensus        62 ------~h~~iv~~~~~~~~~~---------~~~~~~~lv~e~~~~-~l~~~~~~~~~~~--------~~--------~~  109 (334)
T cd07855          62 ------KHDNIIAIRDILRPPG---------ADFKDVYVVMDLMES-DLHHIIHSDQPLT--------EE--------HI  109 (334)
T ss_pred             ------CCCCccCHHHhccccC---------CCCceEEEEEehhhh-hHHHHhccCCCCC--------HH--------HH
Confidence                  1334444333332111         112345899999975 7877765332221        11        11


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+..+++.++.+||..|++|+|++|+||+++.+|.++|+|||++..+.
T Consensus       110 ~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~  158 (334)
T cd07855         110 RYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS  158 (334)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence            2355678889999999999999999999999999999999999987664

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.60  E-value=1.3e-15  Score=147.38  Aligned_cols=89  Identities=15%  Similarity=0.177  Sum_probs=64.0

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...+++|||++|++|.+++............   .......  .....+..++..++.+||+.|++|+|++|+||+++.+
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~  166 (296)
T cd05051          92 PPLCMIMEYMENGDLNQFLQKHVAETSGLAC---NSKSLSF--STLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN  166 (296)
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccccccccc---cCCCCCH--HHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC
Confidence            5679999999999999988654321100000   0000111  1112355677889999999999999999999999999


Q ss_pred             CcEEEEeccccccc
Q 013944          349 GQIGFLDFGLLCRM  362 (433)
Q Consensus       349 g~l~l~DFGl~~~l  362 (433)
                      +.++++|||++..+
T Consensus       167 ~~~~l~dfg~~~~~  180 (296)
T cd05051         167 YTIKIADFGMSRNL  180 (296)
T ss_pred             CceEEccccceeec
Confidence            99999999998754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.60  E-value=1.2e-14  Score=142.38  Aligned_cols=158  Identities=18%  Similarity=0.163  Sum_probs=97.4

Q ss_pred             CCccccccccceeEEEEec--------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          161 SEEPVAAASFGQVYRGSTL--------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~--------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      ..+.||+|++|.||+|+..        ++..||+|+.+.......   ...+                            
T Consensus        16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~---~~~~----------------------------   64 (314)
T cd05099          16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKD---LADL----------------------------   64 (314)
T ss_pred             eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHH---HHHH----------------------------
Confidence            4678999999999999741        346799999875432211   1001                            


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCch--hhhhhhH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTH--LDRQKLD  308 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~--~~~~~~~  308 (433)
                            ..|..-+.    .+.+++  .+.+++..  .....+++|||++|++|.+++....+.........  .....+.
T Consensus        65 ------~~E~~~l~----~l~~h~--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~  132 (314)
T cd05099          65 ------ISEMELMK----LIGKHK--NIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLS  132 (314)
T ss_pred             ------HHHHHHHH----hccCCC--CeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccC
Confidence                  11211111    111122  22333322  23456999999999999999875432110000000  0001111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ... + ..+..++..++.++|+.|++|+|++|+||+++.+++++|+|||.++.+.
T Consensus       133 ~~~-~-~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~  185 (314)
T cd05099         133 FKD-L-VSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVH  185 (314)
T ss_pred             HHH-H-HHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccccc
Confidence            111 1 1245678889999999999999999999999999999999999997664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.60  E-value=1.1e-15  Score=147.83  Aligned_cols=144  Identities=23%  Similarity=0.346  Sum_probs=95.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR--HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~--~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.+|+|++|.||+|+. .+|+.||+|+..+...  ..+.                                       
T Consensus        26 ~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~---------------------------------------   66 (291)
T cd06639          26 IIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIE---------------------------------------   66 (291)
T ss_pred             EEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHH---------------------------------------
Confidence            446899999999999996 5789999998864311  1111                                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc-------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY-------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                        .|...+.++    .+++  .+++++..       .....++||||++|++|.+++.......    ...++.      
T Consensus        67 --~e~~~l~~l----~~h~--ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~----~~~~~~------  128 (291)
T cd06639          67 --AEYNILQSL----PNHP--NVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICG----QRLDEA------  128 (291)
T ss_pred             --HHHHHHHHh----cCCC--CeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcC----CCCCHH------
Confidence              122222111    1122  22222221       1245799999999999998875321000    001111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                        ....+..++..++.++|..|++|+|++|+||+++.++.++++|||.+..+.
T Consensus       129 --~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         129 --MISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             --HHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence              122355667889999999999999999999999999999999999987654

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=8e-15  Score=139.66  Aligned_cols=150  Identities=19%  Similarity=0.187  Sum_probs=96.7

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchh-hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...+.||+|++|.||+|+. .+|+.||+|+....... ....+...+                                 
T Consensus         5 ~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~---------------------------------   51 (264)
T cd06653           5 RLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNAL---------------------------------   51 (264)
T ss_pred             eeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHH---------------------------------
Confidence            3456899999999999995 57999999986432211 001111111                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                       ..|...+.+    +.+..-+.+...+... ....+++|||++|++|.+++......+        +..       . .-
T Consensus        52 -~~ei~~l~~----l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~--------~~~-------~-~~  110 (264)
T cd06653          52 -ECEIQLLKN----LRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALT--------ENV-------T-RR  110 (264)
T ss_pred             -HHHHHHHHH----cCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCC--------HHH-------H-HH
Confidence             222222222    2221112222222111 234689999999999998876432211        111       1 12


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.++|+.|++|+|++|+||+++.++.++++|||++..+.
T Consensus       111 ~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  157 (264)
T cd06653         111 YTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ  157 (264)
T ss_pred             HHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence            45667889999999999999999999999999999999999987653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.60  E-value=1.7e-15  Score=146.38  Aligned_cols=150  Identities=19%  Similarity=0.186  Sum_probs=96.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||.|++|.||+|.. .+++.||+|+...........+                                     +.
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~-------------------------------------~~   47 (287)
T cd06621           5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQ-------------------------------------IL   47 (287)
T ss_pred             EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHH-------------------------------------HH
Confidence            346899999999999996 4789999998765422211000                                     11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      +|...+.+    +.+..-+.+...+.. .....++||||++|++|.+++.......    ..+++        .....+.
T Consensus        48 ~e~~~l~~----l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~l~~--------~~~~~i~  111 (287)
T cd06621          48 RELEINKS----CKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRG----GRIGE--------KVLGKIA  111 (287)
T ss_pred             HHHHHHHh----CCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcC----CCCCH--------HHHHHHH
Confidence            12222221    221111222222211 1235689999999999988765321100    00111        1122356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+++.++.++|..|++|+|++|+||+++.++.++++|||++..+.
T Consensus       112 ~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621         112 ESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             HHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence            678889999999999999999999999999999999999987654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.60  E-value=2e-15  Score=145.51  Aligned_cols=142  Identities=21%  Similarity=0.346  Sum_probs=97.3

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLR--HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~--~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.+|+|++|+||+|... +++.|++|+.+....  +.+..                                      
T Consensus        23 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~--------------------------------------   64 (286)
T cd06614          23 NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIIN--------------------------------------   64 (286)
T ss_pred             HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHH--------------------------------------
Confidence            3468999999999999974 789999999875432  11111                                      


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                         |...+.    .+.+..-+.+...+ ......+++|||++|++|.+++.... ..+        ...       . ..
T Consensus        65 ---e~~~l~----~l~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~--------~~~-------~-~~  120 (286)
T cd06614          65 ---EILIMK----DCKHPNIVDYYDSY-LVGDELWVVMEYMDGGSLTDIITQNFVRMN--------EPQ-------I-AY  120 (286)
T ss_pred             ---HHHHHH----HCCCCCeeEEEEEE-EECCEEEEEEeccCCCcHHHHHHHhccCCC--------HHH-------H-HH
Confidence               111111    12121112222222 22367799999999999999987543 111        111       1 12


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..++.++|..|++|+|++|+||+++.+|.++|+|||.+..+..
T Consensus       121 i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  168 (286)
T cd06614         121 VCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK  168 (286)
T ss_pred             HHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence            455677899999999999999999999999999999999998876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.60  E-value=8.5e-15  Score=140.64  Aligned_cols=144  Identities=19%  Similarity=0.197  Sum_probs=96.3

Q ss_pred             CccccccccceeEEEEec-CCC----EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          162 EEPVAAASFGQVYRGSTL-DGS----IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~----~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      .+.||+|+||+||+|+.+ +|+    .||+|+..........   .                                  
T Consensus        12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~---~----------------------------------   54 (279)
T cd05057          12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKAN---K----------------------------------   54 (279)
T ss_pred             cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHH---H----------------------------------
Confidence            468999999999999863 443    6899987654321100   0                                  


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .+.+|+..+.++    .+.+-+.+....  .+...+++|||++|++|.+++....+.       .++..       . ..
T Consensus        55 ~~~~e~~~l~~l----~h~~i~~~~~~~--~~~~~~~v~e~~~~g~L~~~l~~~~~~-------~~~~~-------~-~~  113 (279)
T cd05057          55 EILDEAYVMASV----DHPHVVRLLGIC--LSSQVQLITQLMPLGCLLDYVRNHKDN-------IGSQY-------L-LN  113 (279)
T ss_pred             HHHHHHHHHHhC----CCCCcceEEEEE--ecCceEEEEecCCCCcHHHHHHhccCC-------CCHHH-------H-HH
Confidence            012233333322    222212222222  236779999999999999988643210       11111       1 12


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.++|+.|++|+|++|+||+++.++.++|+|||++..+.
T Consensus       114 ~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057         114 WCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             HHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence            44578889999999999999999999999999999999999987664

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.60  E-value=1e-15  Score=147.17  Aligned_cols=142  Identities=23%  Similarity=0.329  Sum_probs=94.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..++||+|++|+||+|+. .+|+.||||..+....     ..+..++++++       .+                    
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~-------~l--------------------   56 (284)
T cd07860           4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK-------EL--------------------   56 (284)
T ss_pred             eeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHH-------hc--------------------
Confidence            356899999999999986 4799999998764321     11222222222       11                    


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                            .+.|+.++.+.+.+             ....++||||+. ++|.+++....+..      +++..        .
T Consensus        57 ------~h~~i~~~~~~~~~-------------~~~~~~v~e~~~-~~l~~~~~~~~~~~------l~~~~--------~  102 (284)
T cd07860          57 ------NHPNIVKLLDVIHT-------------ENKLYLVFEFLH-QDLKKFMDASPLSG------IPLPL--------I  102 (284)
T ss_pred             ------CCCCCcchhhhccc-------------CCcEEEEeeccc-cCHHHHHHhCCCCC------CCHHH--------H
Confidence                  23344444443322             234589999997 47777765432111      11111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+..++..++.++|..|++|+|++|+||+++.++.++++|||++..+.
T Consensus       103 ~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860         103 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  151 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence            2245567889999999999999999999999999999999999887553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=1.7e-15  Score=145.42  Aligned_cols=142  Identities=18%  Similarity=0.290  Sum_probs=96.3

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|+||+|+. .+++.||+|+.+........    .                                  +..
T Consensus        10 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~----~----------------------------------~~~   51 (280)
T cd06611          10 IGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELE----D----------------------------------FMV   51 (280)
T ss_pred             HHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHH----H----------------------------------HHH
Confidence            45799999999999996 47899999998654322110    0                                  112


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.    .+.+ +  .+++++..  .....++||||++|++|.+++......       +++..        ...+.
T Consensus        52 e~~~l~----~l~h-~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-------l~~~~--------~~~~~  109 (280)
T cd06611          52 EIDILS----ECKH-P--NIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERG-------LTEPQ--------IRYVC  109 (280)
T ss_pred             HHHHHH----hCCC-C--ceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCC-------CCHHH--------HHHHH
Confidence            222221    1221 1  22333322  235669999999999999987643210       11111        12355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.++|..|++|+|++|.||+++.++.++++|||++....
T Consensus       110 ~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~  154 (280)
T cd06611         110 RQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNK  154 (280)
T ss_pred             HHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence            677889999999999999999999999999999999999876553

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.60  E-value=6.5e-16  Score=154.66  Aligned_cols=189  Identities=19%  Similarity=0.222  Sum_probs=131.1

Q ss_pred             cccCCccccccccceeEEEEec-CCCEEEEEEcCCC-c-hh---------hHHHHHHHHHHHHHHHHHHHhhcCCHHHHH
Q 013944          158 SFISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPN-L-RH---------VVVRDIYILRIGLGLLQKIAKRKSDLRLYA  225 (433)
Q Consensus       158 ~~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~-~-~~---------~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~  225 (433)
                      +|...+|+|+|+||+|..|..+ +...|+||.+... + .+         .+-.+++||.       .+.          
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla-------~l~----------  624 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILA-------TLN----------  624 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHH-------Hhh----------
Confidence            3455679999999999999974 6688999976532 1 11         1222233332       110          


Q ss_pred             HHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeecc-CCCCcchhhhhccCCCCCCCCchhhh
Q 013944          226 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWM-VGESPTDLISLSTGSSVDGSSTHLDR  304 (433)
Q Consensus       226 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i-~G~~L~~~l~~~~~~~~~~~~~~~~~  304 (433)
                                   .+-|.|+.++.+.|+++.+.             +|+||-- +|.+|.|++..+...+          
T Consensus       625 -------------~~sH~NIlKlLdfFEddd~y-------------yl~te~hg~gIDLFd~IE~kp~m~----------  668 (772)
T KOG1152|consen  625 -------------KHSHENILKLLDFFEDDDYY-------------YLETEVHGEGIDLFDFIEFKPRMD----------  668 (772)
T ss_pred             -------------hcCccchhhhhheeecCCee-------------EEEecCCCCCcchhhhhhccCccc----------
Confidence                         12377999999999988876             8888843 5678888887654433          


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHH
Q 013944          305 QKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQS  384 (433)
Q Consensus       305 ~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~  384 (433)
                            +....++.+||.++.++||+.||+|||+|-.|+.++.+|.++|+|||.+......-    ...+++.+  |+ +
T Consensus       669 ------E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgp----fd~f~gtv--~~-a  735 (772)
T KOG1152|consen  669 ------EPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGP----FDVFVGTV--DY-A  735 (772)
T ss_pred             ------hHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCCC----cceeeeec--cc-c
Confidence                  12235788999999999999999999999999999999999999999887554322    22222222  11 3


Q ss_pred             HHHHHHhcCCCCCCCChHHHHHHHHHHh
Q 013944          385 LVHSLTEMDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       385 ~~~~l~~~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      +.+.|-.-.+...+.|+|.++..|+.++
T Consensus       736 apevl~g~~y~gk~qdiwalgillytiv  763 (772)
T KOG1152|consen  736 APEVLGGEKYLGKPQDIWALGILLYTIV  763 (772)
T ss_pred             chhhhCCCccCCCcchhhhhhheeeEEE
Confidence            3444545556677889997776655444

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.60  E-value=5.3e-16  Score=149.13  Aligned_cols=143  Identities=20%  Similarity=0.240  Sum_probs=94.5

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCch-hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .+.||.|++|.||+|+. .+|+.||||+.+.... .....+                                     +.
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~-------------------------------------~~   47 (286)
T cd07832           5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQ-------------------------------------AL   47 (286)
T ss_pred             EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHH-------------------------------------HH
Confidence            45799999999999996 5799999998764321 110000                                     01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +.+ +  .+++++..  .....++||||+ |++|.+++.....       .+++.+        ...+
T Consensus        48 ~e~~~l~~----~~~-~--~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~-------~~~~~~--------~~~~  104 (286)
T cd07832          48 REIKALQA----CQH-P--YVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEER-------PLPEAQ--------VKSY  104 (286)
T ss_pred             HHHHHHHh----CCC-C--CCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCC-------CCCHHH--------HHHH
Confidence            12111111    111 1  12222221  235569999999 9999988764321       011111        1234


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.++|+.|++|+|+||.||++++++.++++|||++.....
T Consensus       105 ~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~  151 (286)
T cd07832         105 MRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSE  151 (286)
T ss_pred             HHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccC
Confidence            56778899999999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.60  E-value=2.4e-14  Score=130.50  Aligned_cols=159  Identities=17%  Similarity=0.198  Sum_probs=102.8

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.+++++||+||.+.- .|++++.+...-...        .++..+   .+                       -+.+|
T Consensus         7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~--------~~~~~~---~~-----------------------l~~rE   51 (218)
T PRK12274          7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPW--------WLRGVA---WW-----------------------LARRE   51 (218)
T ss_pred             ceeecCCCcceEEEeec-CCceeeecccccchh--------hhhhHH---HH-----------------------HHHHH
Confidence            45799999999997764 777877665432111        001000   00                       02345


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      ++.+.++.      +...+|+++..  ...+++|||++|.+|.+....               ...       . +..++
T Consensus        52 ~~iL~~L~------~~~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~~---------------~~~-------~-~~~qi  100 (218)
T PRK12274         52 ALALRQLD------GLPRTPRLLHW--DGRHLDRSYLAGAAMYQRPPR---------------GDL-------A-YFRAA  100 (218)
T ss_pred             HHHHHhcC------CCCCCCEEEEE--cCEEEEEeeecCccHHhhhhh---------------hhH-------H-HHHHH
Confidence            55555442      22457888753  456999999999988643210               000       1 23345


Q ss_pred             HHHHHHHHHCCccccCC-CCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHh
Q 013944          322 EATLVQLLETGILHADP-HPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE  391 (433)
Q Consensus       322 ~~~l~~lh~~givH~Dl-hpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~  391 (433)
                      ..++.++|+.|++|+|+ ||+||+++++|+++|+|||++....+..+  ...   .+...|...+...+..
T Consensus       101 ~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~--~~r---~L~~rDl~~llk~~~~  166 (218)
T PRK12274        101 RRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR--WMR---LLAREDLRHLLKHKRM  166 (218)
T ss_pred             HHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch--HHH---HHHHHHHHHHHHHHHh
Confidence            67899999999999999 79999999999999999999987665432  111   1234677777776544

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.60  E-value=4e-15  Score=139.76  Aligned_cols=195  Identities=19%  Similarity=0.159  Sum_probs=130.6

Q ss_pred             CCccccccccceeEEEE-ecCCCEEEEEEcCCC---chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPN---LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~---~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+-+|+|.+|.|-.++ +.+|.++|||++...   .+..+-++..++..                              
T Consensus        82 t~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~------------------------------  131 (463)
T KOG0607|consen   82 TSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQ------------------------------  131 (463)
T ss_pred             HHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHH------------------------------
Confidence            34679999999999998 689999999986532   23344444433331                              


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                        .+-++|+..+.+.|++...+             |||||-+.||+|...+...+..+        +.+        ..-
T Consensus       132 --Cqgh~nilqLiefFEdd~~F-------------YLVfEKm~GGplLshI~~~~~F~--------E~E--------As~  180 (463)
T KOG0607|consen  132 --CQGHKNILQLIEFFEDDTRF-------------YLVFEKMRGGPLLSHIQKRKHFN--------ERE--------ASR  180 (463)
T ss_pred             --hcCCccHHHHHHHhcccceE-------------EEEEecccCchHHHHHHHhhhcc--------HHH--------HHH
Confidence              34677999999998877665             99999999999988887654433        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCC---cEEEEecccccccCHH------HHHHHHHHHHHHHhcCHHHHHH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QIGFLDFGLLCRMERK------HQFAMLASIVHIVNGDWQSLVH  387 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g---~l~l~DFGl~~~l~~~------~~~~~~~~~~~~~~~d~~~~~~  387 (433)
                      +.+.|..+|.+||..||-|||+||.|||..+..   -+||+||-+...+...      ....++.- ++...--...+++
T Consensus       181 vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tP-vGSAEfMAPEVVd  259 (463)
T KOG0607|consen  181 VVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTP-VGSAEFMAPEVVD  259 (463)
T ss_pred             HHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCc-ccchhhcchhHHh
Confidence            556688899999999999999999999986543   4899999876654211      11111110 1111111123333


Q ss_pred             HHHh-cCCCCCCCChHHHHHHHHHHhh-chhc
Q 013944          388 SLTE-MDVVRPGTNTLRVTMDLEDALG-EVEF  417 (433)
Q Consensus       388 ~l~~-~g~~~~~~d~~~~~~~l~~~l~-~~~~  417 (433)
                      .+.. .-+....-|.|+++..++-+|+ .+.|
T Consensus       260 ~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPF  291 (463)
T KOG0607|consen  260 VFVDQATFYDKRCDLWSLGVILYIMLSGYPPF  291 (463)
T ss_pred             hhccccccccccccHHHHHHHHHHHHhCCCCc
Confidence            3332 3456677899999998887774 4444

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=1.3e-15  Score=145.77  Aligned_cols=144  Identities=24%  Similarity=0.275  Sum_probs=95.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+. .+|+.||+|+.......   .+...+                                  ..
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~----------------------------------~~   48 (274)
T cd06609           6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE---DEIEDI----------------------------------QQ   48 (274)
T ss_pred             hhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc---hHHHHH----------------------------------HH
Confidence            45799999999999996 47899999987533211   011011                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+..    +. ++++.-+..+.......++|+||++|++|.+++... ..        ++..        ...+..+
T Consensus        49 e~~~l~~----l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~--------~~~~--------~~~~~~q  106 (274)
T cd06609          49 EIQFLSQ----CR-SPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KL--------DETY--------IAFILRE  106 (274)
T ss_pred             HHHHHHH----cC-CCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CC--------CHHH--------HHHHHHH
Confidence            2211111    22 222211111112235679999999999999887642 11        1111        1234566


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++.++|..|++|+|++|.||+++.+|.++++|||+++.+..
T Consensus       107 l~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  150 (274)
T cd06609         107 VLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS  150 (274)
T ss_pred             HHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence            78899999999999999999999999999999999999887754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.60  E-value=5.5e-16  Score=150.01  Aligned_cols=154  Identities=16%  Similarity=0.195  Sum_probs=95.5

Q ss_pred             CccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||.|++|.||+|+..      ++..|++|..+......    ..                                 
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~----~~---------------------------------   52 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA----RK---------------------------------   52 (291)
T ss_pred             eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHH----HH---------------------------------
Confidence            468999999999999742      45679999876432211    00                                 


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCch--hhhhhhHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTH--LDRQKLDAKW  311 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~--~~~~~~~~~~  311 (433)
                       .+.+|...+.+    +.+ +  .+.+++..  .....++||||++|++|.+++..............  ..........
T Consensus        53 -~~~~e~~~l~~----l~h-~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (291)
T cd05094          53 -DFQREAELLTN----LQH-E--HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ  124 (291)
T ss_pred             -HHHHHHHHHhc----CCC-C--CcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHH
Confidence             01223222222    111 2  22333322  23567999999999999999875432100000000  0000011111


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                        ...+..++..++.++|..|++|+|++|.||+++.++.++++|||++...
T Consensus       125 --~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~  173 (291)
T cd05094         125 --MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV  173 (291)
T ss_pred             --HHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCccccc
Confidence              1225567888999999999999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.59  E-value=1.7e-15  Score=144.94  Aligned_cols=150  Identities=11%  Similarity=0.123  Sum_probs=95.2

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.+|.|+||.||+|+.+      +.+.|++|+......+....+                                  
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~----------------------------------   54 (275)
T cd05046           9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSE----------------------------------   54 (275)
T ss_pred             eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHH----------------------------------
Confidence            3457999999999999863      346799998754322111000                                  


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCC-CCCCchhhhhhhHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSV-DGSSTHLDRQKLDAKW  311 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~  311 (433)
                         +..|.+.+.++    .+   ..+++++..+  ....++||||++|++|.+++........ .....++...      
T Consensus        55 ---~~~E~~~l~~l----~h---~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~------  118 (275)
T cd05046          55 ---FRRELDMFRKL----SH---KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQ------  118 (275)
T ss_pred             ---HHHHHHHHHhc----CC---cceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHH------
Confidence               12232222222    11   1223333222  2456999999999999999875431100 0000111111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                        ...+..+++.++.+||+.|++|+|++|.||+++.++.+++.|||++...
T Consensus       119 --~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~  167 (275)
T cd05046         119 --KVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDV  167 (275)
T ss_pred             --HHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccccccc
Confidence              1235567888999999999999999999999999999999999997643

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.59  E-value=1.3e-14  Score=139.55  Aligned_cols=143  Identities=22%  Similarity=0.348  Sum_probs=94.9

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.+|+|++|+||+|+. .+|+.||+|+........     ..+                                  ..
T Consensus        21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~-----~~~----------------------------------~~   61 (282)
T cd06636          21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEE-----EEI----------------------------------KL   61 (282)
T ss_pred             heeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHH-----HHH----------------------------------HH
Confidence            46899999999999996 578999999875321110     001                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      |...+.++    .++++  +.+.+..        .....+++|||+++++|.+++....+..      .++        .
T Consensus        62 e~~~l~~~----~~h~~--i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~------~~~--------~  121 (282)
T cd06636          62 EINMLKKY----SHHRN--IATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNA------LKE--------D  121 (282)
T ss_pred             HHHHHHHh----cCCCc--EEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCC------CCH--------H
Confidence            11111111    11121  1222211        1245689999999999999886533211      111        1


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ....+..++..++.++|..|++|+|++|.||+++.++.++|+|||++..+.
T Consensus       122 ~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~  172 (282)
T cd06636         122 WIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  172 (282)
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence            112355678889999999999999999999999999999999999987653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.59  E-value=2.4e-15  Score=148.71  Aligned_cols=93  Identities=17%  Similarity=0.152  Sum_probs=64.9

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCC--CchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGS--STHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT  346 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~  346 (433)
                      ...+++|||++|++|.+++....+...+..  ........+.+...  ..+..+++.++.+||..|++|+|++|.||+++
T Consensus        91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~qi~~al~~LH~~givH~dlkp~Nill~  168 (334)
T cd05100          91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDL--VSCAYQVARGMEYLASQKCIHRDLAARNVLVT  168 (334)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHH--HHHHHHHHHHHHHHHHCCeeccccccceEEEc
Confidence            456999999999999999875432110000  00000111222211  12556788899999999999999999999999


Q ss_pred             cCCcEEEEecccccccC
Q 013944          347 SSGQIGFLDFGLLCRME  363 (433)
Q Consensus       347 ~~g~l~l~DFGl~~~l~  363 (433)
                      .++.++|+|||+++.+.
T Consensus       169 ~~~~~kL~Dfg~~~~~~  185 (334)
T cd05100         169 EDNVMKIADFGLARDVH  185 (334)
T ss_pred             CCCcEEECCcccceecc
Confidence            99999999999987653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.59  E-value=1.2e-15  Score=144.40  Aligned_cols=148  Identities=18%  Similarity=0.186  Sum_probs=94.5

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.+|+|++|.||+|.. .+|+.||+|+........  .+...+.                                  .
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~----------------------------------~   48 (265)
T cd08217           5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTE--KEKQQLV----------------------------------S   48 (265)
T ss_pred             eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCH--HHHHHHH----------------------------------H
Confidence            46799999999999985 588999999875422111  0000011                                  1


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      |...+.+    +.+   -.+++++..    .....+++|||++|++|.+++.......    ...++..       . ..
T Consensus        49 e~~~l~~----l~~---~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~----~~l~~~~-------~-~~  109 (265)
T cd08217          49 EVNILRE----LKH---PNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKER----KYIEEEF-------I-WR  109 (265)
T ss_pred             HHHHHHh----cCC---CccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcc----cCCCHHH-------H-HH
Confidence            1111111    111   112222221    1234589999999999999886431100    0011111       1 12


Q ss_pred             HHHHHHHHHHHHH-----HCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLL-----ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh-----~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..++.++|     ..+++|+|+||+||+++.++.++++|||++..+..
T Consensus       110 ~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~  162 (265)
T cd08217         110 ILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH  162 (265)
T ss_pred             HHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccC
Confidence            4556788999999     89999999999999999999999999999887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.59  E-value=1.4e-15  Score=145.69  Aligned_cols=153  Identities=16%  Similarity=0.176  Sum_probs=96.4

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|++|.||+|..+      ++..||+|....+......                                    
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~------------------------------------   53 (277)
T cd05032          10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRER------------------------------------   53 (277)
T ss_pred             EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHH------------------------------------
Confidence            3568999999999999863      2478999997654321100                                    


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                       ..+..|...+..    +.+ +  .+.+++..  .....+++|||+++++|.+++......... ..   ......... 
T Consensus        54 -~~~~~e~~~l~~----~~~-~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~-~~---~~~~~~~~~-  120 (277)
T cd05032          54 -IEFLNEASVMKE----FNC-H--HVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAEN-NP---GLGPPTLQK-  120 (277)
T ss_pred             -HHHHHHHHHHHh----CCC-C--ceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhh-cc---CCCCCCHHH-
Confidence             011122222211    211 1  22233322  235679999999999999998643211100 00   000011111 


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      . ..+..+++.++.++|+.|++|+|++|+||+++.+|.++|+|||+++.+.
T Consensus       121 ~-~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~  170 (277)
T cd05032         121 F-IQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIY  170 (277)
T ss_pred             H-HHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhc
Confidence            1 1245578889999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.59  E-value=1.7e-15  Score=143.31  Aligned_cols=177  Identities=19%  Similarity=0.117  Sum_probs=109.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCc-hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL-RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~-~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+.||.|++|+||.++. .+|+.|++|...... ......                                     ++
T Consensus         4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~-------------------------------------~~   46 (256)
T cd08221           4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERR-------------------------------------DA   46 (256)
T ss_pred             EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHH-------------------------------------HH
Confidence            356899999999999984 579999999764221 111000                                     01


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ..|...+.+    +.+..-+.+...+. .....+++|||++|++|.+++....+..      +++.+        ...+.
T Consensus        47 ~~e~~~l~~----~~h~~i~~~~~~~~-~~~~~~~~~e~~~~~~L~~~~~~~~~~~------~~~~~--------~~~~~  107 (256)
T cd08221          47 LNEIVILSL----LQHPNIIAYYNHFM-DDNTLLIEMEYANGGTLYDKIVRQKGQL------FEEEM--------VLWYL  107 (256)
T ss_pred             HHHHHHHHh----CCCCCeeEEEeEEe-cCCeEEEEEEecCCCcHHHHHHhccccC------CCHHH--------HHHHH
Confidence            122222222    22222222222222 2356799999999999999886532111      11111        12245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH-------------HHHHHHHHHHHhcCHHHH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ-------------FAMLASIVHIVNGDWQSL  385 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~-------------~~~~~~~~~~~~~d~~~~  385 (433)
                      .++..++.++|+.|++|+|++|+||+++.++.++++|||.+........             .............|++++
T Consensus       108 ~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~sl  187 (256)
T cd08221         108 FQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWAL  187 (256)
T ss_pred             HHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHH
Confidence            5677899999999999999999999999999999999999876643321             000000001223578888


Q ss_pred             HHHHHhcC
Q 013944          386 VHSLTEMD  393 (433)
Q Consensus       386 ~~~l~~~g  393 (433)
                      +..+++|-
T Consensus       188 G~i~~~l~  195 (256)
T cd08221         188 GCVLYELL  195 (256)
T ss_pred             HHHHHHHH
Confidence            87777764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.59  E-value=1.9e-14  Score=138.09  Aligned_cols=148  Identities=23%  Similarity=0.348  Sum_probs=98.1

Q ss_pred             hhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          154 ESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       154 ~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      ++.|.  ..+.||+|++|.||+|.. .+|+.||||+...........                                 
T Consensus         3 ~~~~~--~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~---------------------------------   47 (277)
T cd06641           3 EELFT--KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE---------------------------------   47 (277)
T ss_pred             HHhhh--hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHH---------------------------------
Confidence            34444  345699999999999985 578999999875332111000                                 


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                          ++.+|...+.++    .+ +  .+.+++..  .....++||||++|++|.+++.... .        +...     
T Consensus        48 ----~~~~e~~~l~~l----~h-~--~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~-~--------~~~~-----  102 (277)
T cd06641          48 ----DIQQEITVLSQC----DS-P--YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-L--------DETQ-----  102 (277)
T ss_pred             ----HHHHHHHHHHhc----CC-C--CEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcCC-C--------CHHH-----
Confidence                112232222222    11 2  22233322  2356799999999999998875321 1        1111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                         ...+..+++.++.++|+.|++|+|++|+||+++.+|.++++|||++..+..
T Consensus       103 ---~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06641         103 ---IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  153 (277)
T ss_pred             ---HHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceeccc
Confidence               123456678899999999999999999999999999999999999876644

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.59  E-value=2.9e-15  Score=141.07  Aligned_cols=150  Identities=21%  Similarity=0.171  Sum_probs=95.1

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||.|++|.||+|.. .+|+.|++|+........  .+..-+.                                  .
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~----------------------------------~   48 (258)
T cd08215           5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE--KEREDAL----------------------------------N   48 (258)
T ss_pred             EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh--HHHHHHH----------------------------------H
Confidence            46799999999999996 479999999876432210  0100011                                  1


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |.+.+..    +.+..-+.+...+ ......+++|||++|++|.+.+.......    ..+++..       + ..+..+
T Consensus        49 e~~~l~~----l~~~~~~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~-------~-~~i~~~  111 (258)
T cd08215          49 EVKILKK----LNHPNIIKYYESF-EEKGKLCIVMEYADGGDLSQKIKKQKKEG----KPFPEEQ-------I-LDWFVQ  111 (258)
T ss_pred             HHHHHHh----cCCCChhheEEEE-ecCCEEEEEEEecCCCcHHHHHHHhhccC----CCcCHHH-------H-HHHHHH
Confidence            1111111    1111111111111 12256699999999999999886532000    0011111       1 124456


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++.+||+.|++|+|++|.||++++++.++++|||++.....
T Consensus       112 i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~  155 (258)
T cd08215         112 LCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS  155 (258)
T ss_pred             HHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence            78899999999999999999999999999999999999876544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.59  E-value=2.8e-16  Score=164.24  Aligned_cols=202  Identities=14%  Similarity=0.166  Sum_probs=123.5

Q ss_pred             CccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.+|.|.||.||+|+..      +-+.||||.++.....+...|+   ++++.++..+                     
T Consensus       491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF---~REaeLla~l---------------------  546 (774)
T KOG1026|consen  491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDF---RREAELLAEL---------------------  546 (774)
T ss_pred             hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHH---HHHHHHHHhc---------------------
Confidence            347999999999999852      3467999998865554333331   1222222111                     


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                           .|+|+++|.+.+..             ..+.+||.|||..|+|.+++....+.....+..-+.+..+...+.+  
T Consensus       547 -----~H~nIVrLlGVC~~-------------~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L--  606 (774)
T KOG1026|consen  547 -----QHPNIVRLLGVCRE-------------GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFL--  606 (774)
T ss_pred             -----cCCCeEEEEEEEcc-------------CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHH--
Confidence                 22233333333322             2455999999999999999987654332211110101112222222  


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHH-HHHHHHHhcCHHHHHHHHHhcCC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAML-ASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~-~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      .++.||++|+.||-++.|+||||-..|+||..+-.|||.|||+++.+=..+-+.+. ..++.     ...|+..-+.-|-
T Consensus       607 ~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lP-----IRWMppEsIly~k  681 (774)
T KOG1026|consen  607 HIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLP-----IRWMPPESILYGK  681 (774)
T ss_pred             HHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceee-----eecCCHHHhhcCc
Confidence            37788999999999999999999999999999999999999999876433211111 00000     1233444444555


Q ss_pred             CCCCCChHHHHHHHHHHh
Q 013944          395 VRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l  412 (433)
                      .+.+.|+|+++--|=++.
T Consensus       682 FTteSDVWs~GVvLWEIF  699 (774)
T KOG1026|consen  682 FTTESDVWSFGVVLWEIF  699 (774)
T ss_pred             ccchhhhhhhhhhhhhhh
Confidence            566667776666555554

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=4.3e-15  Score=151.36  Aligned_cols=144  Identities=24%  Similarity=0.275  Sum_probs=108.9

Q ss_pred             cccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .+|+|.||.||-|+. .+....|||-+...    -.++.+-|..++.+-+                          ...|
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek----dsr~~QPLhEEIaLH~--------------------------~LrH  631 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK----DSREVQPLHEEIALHS--------------------------TLRH  631 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccc----cchhhccHHHHHHHHH--------------------------HHhh
Confidence            799999999999995 46678999976422    1222222222211111                          4578


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVE  322 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~  322 (433)
                      +|++++.+.+..+.++             -+.||-++||+|++++....|+--++             +.-+.+..++|.
T Consensus       632 kNIVrYLGs~senGf~-------------kIFMEqVPGGSLSsLLrskWGPlKDN-------------Estm~fYtkQIL  685 (1226)
T KOG4279|consen  632 KNIVRYLGSVSENGFF-------------KIFMEQVPGGSLSSLLRSKWGPLKDN-------------ESTMNFYTKQIL  685 (1226)
T ss_pred             HhHHHHhhccCCCCeE-------------EEEeecCCCCcHHHHHHhccCCCccc-------------hhHHHHHHHHHH
Confidence            8999999988777766             67899999999999998765532111             122357889999


Q ss_pred             HHHHHHHHCCccccCCCCCceEEc-cCCcEEEEecccccccC
Q 013944          323 ATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRME  363 (433)
Q Consensus       323 ~~l~~lh~~givH~DlhpgNilv~-~~g~l~l~DFGl~~~l~  363 (433)
                      .+|+|||+..|+|||+|-+|+||+ -.|.+||.|||.++++.
T Consensus       686 eGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA  727 (1226)
T KOG4279|consen  686 EGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA  727 (1226)
T ss_pred             HHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc
Confidence            999999999999999999999996 57999999999998874

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.58  E-value=5e-15  Score=142.21  Aligned_cols=146  Identities=20%  Similarity=0.248  Sum_probs=93.2

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+.......  +...+.                                   
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~-----------------------------------   48 (283)
T cd06617           6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE--QKRLLM-----------------------------------   48 (283)
T ss_pred             EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH--HHHHHH-----------------------------------
Confidence            45799999999999996 4799999998875533211  111111                                   


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |.....+   .. ++++  +++++..  .....+++|||++| +|.+++.......    ..+++.        ....+.
T Consensus        49 e~~~~~~---~~-~~~~--iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~----~~~~~~--------~~~~~~  109 (283)
T cd06617          49 DLDISMR---SV-DCPY--TVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKG----LTIPED--------ILGKIA  109 (283)
T ss_pred             HHHHHHH---Hc-CCCC--eeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCC----CCCCHH--------HHHHHH
Confidence            1111111   11 1122  2222221  23567999999984 6777665321110    011111        112345


Q ss_pred             HHHHHHHHHHHHC-CccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~-givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+++.++.++|+. +++|+|+||+||+++.++.++|+|||++..+.
T Consensus       110 ~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617         110 VSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             HHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            6788899999997 99999999999999999999999999987654

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.58  E-value=8e-15  Score=145.18  Aligned_cols=153  Identities=18%  Similarity=0.212  Sum_probs=97.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...++||+|++|.||+|+. .+|+.||||..++.......  ..-....+.++..+                       
T Consensus         7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~--~~~~~~E~~~l~~l-----------------------   61 (337)
T cd07858           7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRID--AKRTLREIKLLRHL-----------------------   61 (337)
T ss_pred             eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccch--hHHHHHHHHHHHhc-----------------------
Confidence            33456899999999999995 58999999987653221100  00000111111111                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         .+.|+.++.+.+.....        ......+++|||+. ++|.+++......+        +..        ...+
T Consensus        62 ---~h~ni~~~~~~~~~~~~--------~~~~~~~lv~e~~~-~~L~~~~~~~~~l~--------~~~--------~~~i  113 (337)
T cd07858          62 ---DHENVIAIKDIMPPPHR--------EAFNDVYIVYELMD-TDLHQIIRSSQTLS--------DDH--------CQYF  113 (337)
T ss_pred             ---CCCCccchHHheecccc--------cccCcEEEEEeCCC-CCHHHHHhcCCCCC--------HHH--------HHHH
Confidence               23355554443321110        01123599999997 57777765332211        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||..|++|+|++|.||+++.++.++|+|||++.....
T Consensus       114 ~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858         114 LYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE  160 (337)
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence            56788899999999999999999999999999999999999886643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.58  E-value=1.9e-15  Score=142.69  Aligned_cols=147  Identities=16%  Similarity=0.141  Sum_probs=93.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||.|++|.||+|.. .+++.||||+........  .....+                                  .
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~----------------------------------~   47 (256)
T cd08220           4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK--DERLAA----------------------------------Q   47 (256)
T ss_pred             EEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc--HHHHHH----------------------------------H
Confidence            356899999999999985 578999999875431110  001111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    . ++  .+++++..  .....++||||++|++|.+++....+..      .++..       + ..+
T Consensus        48 ~e~~~l~~~----~-~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~~-------~-~~~  106 (256)
T cd08220          48 NECQVLKLL----S-HP--NIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSL------LDEDT-------I-LHF  106 (256)
T ss_pred             HHHHHHhhC----C-CC--chhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccC------CCHHH-------H-HHH
Confidence            122211111    1 11  11222211  2345699999999999999986532211      11111       1 124


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccC-CcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.++|+.|++|+|++|+||+++.+ +.++++|||++..+..
T Consensus       107 ~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220         107 FVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence            4567789999999999999999999999865 4689999999886643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.58  E-value=2.3e-15  Score=145.48  Aligned_cols=92  Identities=14%  Similarity=0.144  Sum_probs=64.4

Q ss_pred             CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc
Q 013944          268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS  347 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~  347 (433)
                      ....+++|||++|++|.+++......... .........+....  ...+..++..++.++|..|++|+|++|.||+++.
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~-~~~~~~~~~l~~~~--~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~  155 (288)
T cd05093          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVL-MAEGNRPAELTQSQ--MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE  155 (288)
T ss_pred             CCccEEEEEcCCCCCHHHHHHHcCCcccc-ccccCCCCCCCHHH--HHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence            35679999999999999988643321100 00000000011111  1235567888999999999999999999999999


Q ss_pred             CCcEEEEeccccccc
Q 013944          348 SGQIGFLDFGLLCRM  362 (433)
Q Consensus       348 ~g~l~l~DFGl~~~l  362 (433)
                      ++.++++|||++..+
T Consensus       156 ~~~~kl~dfg~~~~~  170 (288)
T cd05093         156 NLLVKIGDFGMSRDV  170 (288)
T ss_pred             CCcEEeccCCccccc
Confidence            999999999998755

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.58  E-value=1.3e-15  Score=144.63  Aligned_cols=81  Identities=15%  Similarity=0.074  Sum_probs=61.4

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...++||||++|++|.+++......       .+...        ...+..+++.++.++|+.|++|+|+||.||+++.+
T Consensus        72 ~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~~~--------~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~  136 (258)
T cd05078          72 DESIMVQEYVKFGSLDTYLKKNKNL-------INISW--------KLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIRE  136 (258)
T ss_pred             CCcEEEEecCCCCcHHHHHhcCCCC-------CCHHH--------HHHHHHHHHHHHHHHHHCCeecCCCccceEEEecc
Confidence            4568999999999999988643210       01111        12245678889999999999999999999999877


Q ss_pred             Cc--------EEEEecccccccCH
Q 013944          349 GQ--------IGFLDFGLLCRMER  364 (433)
Q Consensus       349 g~--------l~l~DFGl~~~l~~  364 (433)
                      +.        ++++|||.+.....
T Consensus       137 ~~~~~~~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078         137 EDRKTGNPPFIKLSDPGISITVLP  160 (258)
T ss_pred             cccccCCCceEEecccccccccCC
Confidence            64        69999998875543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.58  E-value=1.7e-14  Score=138.51  Aligned_cols=149  Identities=20%  Similarity=0.222  Sum_probs=95.5

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||.|++|.||+|...      .+..|++|..+........                                    
T Consensus        10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~------------------------------------   53 (277)
T cd05036          10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDE------------------------------------   53 (277)
T ss_pred             eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHH------------------------------------
Confidence            3468999999999999964      4678999987654322111                                    


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                       .++..|...+.+    +. ++  .+.+++.  ......+++|||++|++|.+++....... .....+.      ....
T Consensus        54 -~~~~~e~~~l~~----l~-~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~-~~~~~~~------~~~~  118 (277)
T cd05036          54 -SDFLMEALIMSK----FN-HQ--NIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRP-ERPSSLT------MKDL  118 (277)
T ss_pred             -HHHHHHHHHHHh----CC-CC--CEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCC-CCCCCCC------HHHH
Confidence             112223222222    21 12  2233332  12345699999999999999986543211 0001111      1111


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC---cEEEEeccccccc
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QIGFLDFGLLCRM  362 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g---~l~l~DFGl~~~l  362 (433)
                        ..+..++..++.+||..|++|+|++|+||+++.++   .++++|||++..+
T Consensus       119 --~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~  169 (277)
T cd05036         119 --LFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDI  169 (277)
T ss_pred             --HHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCcccccc
Confidence              12455678899999999999999999999998765   5999999998765

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.58  E-value=1.6e-15  Score=149.58  Aligned_cols=143  Identities=13%  Similarity=0.096  Sum_probs=92.2

Q ss_pred             cccccc--ccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          163 EPVAAA--SFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       163 ~pigsg--S~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      +.||.|  +++.||+++. .+|+.||||..+......  .....+.                                  
T Consensus         4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~----------------------------------   47 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN--EMVTFLQ----------------------------------   47 (327)
T ss_pred             hhccccccceEEEEEEeecccCcEEEEEEechhhccH--HHHHHHH----------------------------------
Confidence            358888  7899999986 589999999876432110  0000111                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|..-    ...+. +++  +.+++.  ......++||||++|++|.+++.......      .++.       .+ ..+
T Consensus        48 ~e~~~----l~~l~-hpn--iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~------l~~~-------~~-~~i  106 (327)
T cd08227          48 GELHV----SKLFN-HPN--IVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG------MSEL-------AI-AYI  106 (327)
T ss_pred             HHHHH----HHhcC-CCC--eeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCC------CCHH-------HH-HHH
Confidence            11111    11121 222  222222  22356799999999999999886432110      1111       11 235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++..+|.+||+.|++|+|+||.||+++.++.+++.|||....+
T Consensus       107 ~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~  151 (327)
T cd08227         107 LQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM  151 (327)
T ss_pred             HHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcc
Confidence            567888999999999999999999999999999999999865443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.58  E-value=5.9e-14  Score=137.73  Aligned_cols=163  Identities=21%  Similarity=0.274  Sum_probs=102.7

Q ss_pred             HHHHHhCCChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHH
Q 013944          144 IIEEELGSPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLR  222 (433)
Q Consensus       144 ~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~  222 (433)
                      +...-++.++...|.  ..+.||+|++|+||+|+. .+|+.||+|+.......... ...                    
T Consensus        14 ~~~~~~~~~~~~~f~--~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~-~~~--------------------   70 (317)
T cd06635          14 IAELFFKEDPEKLFT--DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE-KWQ--------------------   70 (317)
T ss_pred             HHHHhcCCCchhhhh--hhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchH-HHH--------------------
Confidence            344556777777765  456799999999999995 57899999987543211100 000                    


Q ss_pred             HHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchh
Q 013944          223 LYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHL  302 (433)
Q Consensus       223 ~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~  302 (433)
                                    ++..|.+.+.+    +.+..-+.+...+ ......++||||+.| ++.+.+......       ++
T Consensus        71 --------------~~~~e~~~l~~----l~h~~iv~~~~~~-~~~~~~~lv~e~~~g-~l~~~~~~~~~~-------l~  123 (317)
T cd06635          71 --------------DIIKEVKFLQR----IKHPNSIEYKGCY-LREHTAWLVMEYCLG-SASDLLEVHKKP-------LQ  123 (317)
T ss_pred             --------------HHHHHHHHHHh----CCCCCEEEEEEEE-eeCCeEEEEEeCCCC-CHHHHHHHhcCC-------CC
Confidence                          01222222222    2222212222221 123567999999986 666665432110       11


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          303 DRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       303 ~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +.+       + ..+..+++.++.++|..|++|+|++|+||+++.++.++++|||++.....
T Consensus       124 ~~~-------~-~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (317)
T cd06635         124 EVE-------I-AAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP  177 (317)
T ss_pred             HHH-------H-HHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence            111       1 12455678899999999999999999999999999999999998775543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.58  E-value=1.5e-14  Score=137.34  Aligned_cols=110  Identities=19%  Similarity=0.164  Sum_probs=75.5

Q ss_pred             CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc
Q 013944          268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS  347 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~  347 (433)
                      .+..+++|||+.+++|.+++.......       .      .. .+. .+..++..++.++|+.|++|+|++|.||++++
T Consensus        69 ~~~~~lv~e~~~~~~L~~~~~~~~~~~-------~------~~-~~~-~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~  133 (262)
T cd05058          69 EGSPLVVLPYMKHGDLRNFIRSETHNP-------T------VK-DLI-GFGLQVAKGMEYLASKKFVHRDLAARNCMLDE  133 (262)
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcCCCC-------C------HH-HHH-HHHHHHHHHHHHHHhCCccccccCcceEEEcC
Confidence            345689999999999999886432110       0      11 111 23457888999999999999999999999999


Q ss_pred             CCcEEEEecccccccCHHHH-----------------HHHHHHHHHHHhcCHHHHHHHHHhc
Q 013944          348 SGQIGFLDFGLLCRMERKHQ-----------------FAMLASIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       348 ~g~l~l~DFGl~~~l~~~~~-----------------~~~~~~~~~~~~~d~~~~~~~l~~~  392 (433)
                      ++.++++|||++..+.....                 .............|.|+++..+++|
T Consensus       134 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  195 (262)
T cd05058         134 SFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL  195 (262)
T ss_pred             CCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHH
Confidence            99999999999875432110                 0111111113356888888888776

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.58  E-value=5.3e-15  Score=142.26  Aligned_cols=144  Identities=21%  Similarity=0.310  Sum_probs=94.3

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|.. .+|..+++|.........    ...+                                  ..
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~----------------------------------~~   51 (282)
T cd06643          10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE----LEDY----------------------------------MV   51 (282)
T ss_pred             HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHH----HHHH----------------------------------HH
Confidence            35799999999999996 468899999876443221    1111                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+..    +.+..-+.+...+ ......++||||++|++|.+++.....       .+++..        ...+..+
T Consensus        52 e~~~l~~----l~h~~ii~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~~~~~-------~l~~~~--------~~~~~~q  111 (282)
T cd06643          52 EIDILAS----CDHPNIVKLLDAF-YYENNLWILIEFCAGGAVDAVMLELER-------PLTEPQ--------IRVVCKQ  111 (282)
T ss_pred             HHHHHHH----CCCCCeeeEEEEE-eeCCEEEEEEEecCCCcHHHHHHhcCC-------CCCHHH--------HHHHHHH
Confidence            2221111    2111112221111 123567999999999999887653211       011111        1235567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++.+|.+||+.|++|+|++|.||+++.+++++++|||++....
T Consensus       112 i~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  154 (282)
T cd06643         112 TLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT  154 (282)
T ss_pred             HHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccc
Confidence            8889999999999999999999999999999999999986553

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.58  E-value=5e-15  Score=143.20  Aligned_cols=81  Identities=15%  Similarity=0.212  Sum_probs=59.3

Q ss_pred             eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc-CC
Q 013944          271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SG  349 (433)
Q Consensus       271 ~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~-~g  349 (433)
                      .+++|||++| ++.+++........   ..+++..        ...+..+++.+|.+||..|++|+|++|+||+++. ++
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~---~~~~~~~--------~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~  148 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPG---RPLPAKT--------IKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG  148 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCC---CCCCHHH--------HHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCC
Confidence            5899999997 78777654321100   0111111        1234567888999999999999999999999998 89


Q ss_pred             cEEEEecccccccC
Q 013944          350 QIGFLDFGLLCRME  363 (433)
Q Consensus       350 ~l~l~DFGl~~~l~  363 (433)
                      .++++|||++..+.
T Consensus       149 ~~kl~dfg~~~~~~  162 (295)
T cd07837         149 LLKIADLGLGRAFS  162 (295)
T ss_pred             eEEEeecccceecC
Confidence            99999999987653

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.58  E-value=1.6e-15  Score=144.71  Aligned_cols=144  Identities=26%  Similarity=0.305  Sum_probs=95.0

Q ss_pred             CCccccccccceeEEEEec-CC---CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTL-DG---SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G---~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+.||+|++|.||+|+.+ +|   ..||||+...........+                                    
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~------------------------------------   51 (269)
T cd05065           8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRD------------------------------------   51 (269)
T ss_pred             EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHH------------------------------------
Confidence            3567999999999999964 34   3699999875432211111                                    


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                       |..|...+..    +.+ +  .+.+.+.  ......++||||++|++|.+++....+.       ++..+       + 
T Consensus        52 -~~~e~~~l~~----l~h-~--ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~-------~-  108 (269)
T cd05065          52 -FLSEASIMGQ----FDH-P--NIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQ-------FTVIQ-------L-  108 (269)
T ss_pred             -HHHHHHHHHh----CCC-c--CcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCC-------CCHHH-------H-
Confidence             1122222211    111 1  1222222  2235569999999999999988643211       11111       1 


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+..+++.++.++|+.|++|+|+||.||+++.++.++++|||.+..+.
T Consensus       109 ~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065         109 VGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             HHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence            1245677889999999999999999999999999999999999886553

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.58  E-value=4.5e-15  Score=147.36  Aligned_cols=145  Identities=19%  Similarity=0.273  Sum_probs=92.7

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCch-h----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-H----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-~----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      ...++||+|++|.||+|+. .+|+.||||+.+.... +    .+..++.+++       .                    
T Consensus        18 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~-------~--------------------   70 (342)
T cd07879          18 TSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLK-------H--------------------   70 (342)
T ss_pred             EEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHH-------h--------------------
Confidence            3467999999999999995 5799999998764321 1    1112222211       1                    


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                            ..+.|+.++.+.+......       ......++||||+.+ ++.++..  ...        ++.        .
T Consensus        71 ------l~h~niv~~~~~~~~~~~~-------~~~~~~~lv~e~~~~-~l~~~~~--~~~--------~~~--------~  118 (342)
T cd07879          71 ------MQHENVIGLLDVFTSAVSG-------DEFQDFYLVMPYMQT-DLQKIMG--HPL--------SED--------K  118 (342)
T ss_pred             ------cCCCCccchhheecccccC-------CCCceEEEEeccccc-CHHHHHc--CCC--------CHH--------H
Confidence                  1233444444333211110       112345899999974 5544431  111        111        1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ...+..++..++.++|..|++|+|++|+||+++.+|.++++|||++....
T Consensus       119 ~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~  168 (342)
T cd07879         119 VQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD  168 (342)
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence            12355677889999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.57  E-value=8.2e-15  Score=138.43  Aligned_cols=149  Identities=19%  Similarity=0.242  Sum_probs=96.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+++|+|++|.||+|.. .+|..||+|.........  .+...+..++.+++.+                         
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~E~~~l~~~-------------------------   56 (257)
T cd08225           4 IIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--KEKEASKKEVILLAKM-------------------------   56 (257)
T ss_pred             EEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--hhhHHHHHHHHHHHhC-------------------------
Confidence            356899999999999996 478999999875321100  0111111111111111                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       .+.|+.++.+.+..             ....++++||++|++|.+++....+..      .++..        ...+..
T Consensus        57 -~h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~~--------~~~~~~  108 (257)
T cd08225          57 -KHPNIVTFFASFQE-------------NGRLFIVMEYCDGGDLMKRINRQRGVL------FSEDQ--------ILSWFV  108 (257)
T ss_pred             -CCCChhhhhheecc-------------CCeEEEEEecCCCCcHHHHHHhccCCC------CCHHH--------HHHHHH
Confidence             12344444443322             234599999999999999886432211      11111        112345


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCc-EEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQ-IGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~-l~l~DFGl~~~l~~  364 (433)
                      ++..++.++|..|++|+|++|.||++++++. ++++|||.+..+..
T Consensus       109 ~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225         109 QISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             HHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence            6778999999999999999999999988864 69999999876643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.57  E-value=5.8e-15  Score=142.57  Aligned_cols=141  Identities=20%  Similarity=0.291  Sum_probs=93.7

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|.. .+|+.|++|+.+-.....   .-.+                                   .
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~~~~-----------------------------------~   64 (285)
T cd06648          23 NFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR---RELL-----------------------------------F   64 (285)
T ss_pred             cceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH---HHHH-----------------------------------H
Confidence            346899999999999985 588999999764211110   0000                                   1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|..-+..    +. +++  +.+++.  ......++++||++|++|.+++... ..+        ..       .+ ..+
T Consensus        65 ~e~~~l~~----~~-h~~--vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~--------~~-------~~-~~~  120 (285)
T cd06648          65 NEVVIMRD----YQ-HPN--IVEMYSSYLVGDELWVVMEFLEGGALTDIVTHT-RMN--------EE-------QI-ATV  120 (285)
T ss_pred             HHHHHHHH----cC-CCC--hheEEEEEEcCCeEEEEEeccCCCCHHHHHHhC-CCC--------HH-------HH-HHH
Confidence            11111111    11 122  222222  2345679999999999999987641 111        11       11 124


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++..++.++|+.|++|+|++|.||+++.++.++++|||++....
T Consensus       121 ~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~  166 (285)
T cd06648         121 CLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVS  166 (285)
T ss_pred             HHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhc
Confidence            5667889999999999999999999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.57  E-value=2.2e-15  Score=143.58  Aligned_cols=87  Identities=21%  Similarity=0.164  Sum_probs=63.0

Q ss_pred             CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc
Q 013944          268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS  347 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~  347 (433)
                      ....+++|||++|++|.+++.........       ........ + ..+..+++.++.++|+.|++|+|++|.||++++
T Consensus        71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~-------~~~~~~~~-~-~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~  141 (269)
T cd05044          71 NEPQYIIMELMEGGDLLSYLRDARVERFG-------PPLLTLKE-L-LDICLDVAKGCVYLEQMHFIHRDLAARNCLVSE  141 (269)
T ss_pred             CCCeEEEEeccCCCcHHHHHHHhhhcccC-------CccccHHH-H-HHHHHHHHHHHHHHHhCCcccCCCChheEEEec
Confidence            35579999999999999988643211000       00011111 1 124556788999999999999999999999998


Q ss_pred             CC-----cEEEEecccccccC
Q 013944          348 SG-----QIGFLDFGLLCRME  363 (433)
Q Consensus       348 ~g-----~l~l~DFGl~~~l~  363 (433)
                      ++     .++++|||++..+.
T Consensus       142 ~~~~~~~~~~l~dfg~~~~~~  162 (269)
T cd05044         142 KGYDADRVVKIGDFGLARDIY  162 (269)
T ss_pred             CCCCCCcceEECCcccccccc
Confidence            87     89999999987653

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.57  E-value=4.1e-15  Score=141.89  Aligned_cols=143  Identities=20%  Similarity=0.188  Sum_probs=94.2

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ...||+|++|.||+|+. .+++.|++|.........    ...+                                  ..
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~----~~~~----------------------------------~~   54 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY----VQPL----------------------------------HE   54 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHH----HHHH----------------------------------HH
Confidence            35799999999999995 578899999876543221    1111                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.++    . ++  .+.+++..  .....+++|||++|++|.+++......-     ...+        .....+.
T Consensus        55 e~~~l~~l----~-h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-----~~~~--------~~~~~~~  114 (268)
T cd06624          55 EIALHSYL----K-HR--NIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPL-----KDNE--------QTIIFYT  114 (268)
T ss_pred             HHHHHHhc----C-CC--CeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccC-----CCcH--------HHHHHHH
Confidence            22222221    1 11  12222221  2245699999999999999886431100     0000        1112345


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEcc-CCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l  362 (433)
                      .++..++.+||..|++|+|++|.||+++. ++.++|+|||++..+
T Consensus       115 ~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624         115 KQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             HHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence            67889999999999999999999999976 679999999988755

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=4.9e-15  Score=141.16  Aligned_cols=153  Identities=21%  Similarity=0.268  Sum_probs=97.0

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchh--hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH--VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~--~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ...++||+|++|.||+|.. .+++.|++|+.......  .+..++.+++       ++                      
T Consensus         9 ~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~-------~~----------------------   59 (275)
T cd06608           9 ELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILR-------KY----------------------   59 (275)
T ss_pred             eheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHH-------Hh----------------------
Confidence            3457899999999999996 47899999998754321  1122222111       00                      


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                         .++.|+.++.+.+.....       .......+++|||++|++|.+++.......    ..+.+        .....
T Consensus        60 ---~~h~~i~~~~~~~~~~~~-------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~----~~~~~--------~~~~~  117 (275)
T cd06608          60 ---SNHPNIATFYGAFIKKNP-------PGNDDQLWLVMELCGGGSVTDLVKGLRKKG----KRLKE--------EWIAY  117 (275)
T ss_pred             ---cCCCChheEEEEEEecCC-------CCcceEEEEEEEcCCCCcHHHHHHHHhhcC----CCCCH--------HHHHH
Confidence               011222222211110000       011234589999999999998876422000    00111        11223


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.+||+.|++|+|++|.||+++.++.++++|||++....
T Consensus       118 ~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~  164 (275)
T cd06608         118 ILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLD  164 (275)
T ss_pred             HHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecc
Confidence            56678889999999999999999999999999999999999987654

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.57  E-value=3.6e-15  Score=143.25  Aligned_cols=144  Identities=19%  Similarity=0.245  Sum_probs=94.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||.|++|+||+|+. .+|+.||||+.+........   ..                                  +.
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~---~~----------------------------------~~   46 (284)
T cd07836           4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTP---ST----------------------------------AI   46 (284)
T ss_pred             EeeeeccCCceEEEEEEECCCCeEEEEEEecccccccch---HH----------------------------------HH
Confidence            356899999999999996 47999999988654321100   00                                  01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    . ++  .+++++..  .....++||||++| +|.+++......     ..+++.+        ...+
T Consensus        47 ~E~~~l~~l----~-h~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~-----~~~~~~~--------~~~~  105 (284)
T cd07836          47 REISLMKEL----K-HE--NIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVR-----GALDPNT--------VKSF  105 (284)
T ss_pred             HHHHHHHhh----c-CC--CEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCC-----CCcCHHH--------HHHH
Confidence            122222222    1 12  23333332  23556999999996 777776532210     0011111        1224


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++..++.++|..|++|+|++|.||++++++.++++|||++..+
T Consensus       106 ~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~  150 (284)
T cd07836         106 TYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAF  150 (284)
T ss_pred             HHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhh
Confidence            566788999999999999999999999999999999999998754

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.57  E-value=8.9e-15  Score=145.43  Aligned_cols=151  Identities=20%  Similarity=0.268  Sum_probs=92.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..++||+|++|.||+|.. .+|+.||||+...........  ..+..++.++..+                         
T Consensus        21 ~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~--~~~~~Ei~~l~~l-------------------------   73 (345)
T cd07877          21 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA--KRTYRELRLLKHM-------------------------   73 (345)
T ss_pred             EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHH--HHHHHHHHHHHHc-------------------------
Confidence            457899999999999985 689999999886543211100  0011111111111                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       .+.|+.++.+.+.....       .......+++++++ |++|.+++... ..+        +..        ...+..
T Consensus        74 -~h~~iv~~~~~~~~~~~-------~~~~~~~~lv~~~~-~~~L~~~~~~~-~l~--------~~~--------~~~i~~  127 (345)
T cd07877          74 -KHENVIGLLDVFTPARS-------LEEFNDVYLVTHLM-GADLNNIVKCQ-KLT--------DDH--------VQFLIY  127 (345)
T ss_pred             -CCCcccceeeeeeeccc-------ccccccEEEEehhc-ccCHHHHHhcC-CCC--------HHH--------HHHHHH
Confidence             12233222221111000       01113357888887 67887766432 111        111        122456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..++.++|+.|++|+|++|+||+++.+|.++++|||++.....
T Consensus       128 qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~  172 (345)
T cd07877         128 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  172 (345)
T ss_pred             HHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence            778899999999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.57  E-value=8.6e-15  Score=140.33  Aligned_cols=142  Identities=23%  Similarity=0.317  Sum_probs=95.4

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchh-----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|++|.||+|.. .+|+.+++|..+.....     .+..++.+++       .+                     
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~-------~l---------------------   55 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLK-------EL---------------------   55 (283)
T ss_pred             ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHH-------Hh---------------------
Confidence            35799999999999986 58999999987654322     1111111111       11                     


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                           .+.|+.++.+.+...             ...+++|||+++ ++.+.+.....       .+++..        ..
T Consensus        56 -----~~~~i~~~~~~~~~~-------------~~~~~v~e~~~~-~l~~~l~~~~~-------~~~~~~--------~~  101 (283)
T cd05118          56 -----NHPNIIKLLDVFRHK-------------GDLYLVFEFMDT-DLYKLIKDRQR-------GLPESL--------IK  101 (283)
T ss_pred             -----cCCCcchHHHhhccC-------------CCEEEEEeccCC-CHHHHHHhhcc-------cCCHHH--------HH
Confidence                 123444444433222             445899999986 77776654211       011111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .+..++..++.+||..|++|+|+||.||+++.++.++++|||.+..+...
T Consensus       102 ~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~  151 (283)
T cd05118         102 SYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSP  151 (283)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence            35566788999999999999999999999999999999999998777553

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.57  E-value=1.2e-14  Score=137.46  Aligned_cols=142  Identities=23%  Similarity=0.330  Sum_probs=96.9

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+. .+|+.||+|+............ ..                                   ..
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~-~~-----------------------------------~~   47 (260)
T PF00069_consen    4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE-EN-----------------------------------IR   47 (260)
T ss_dssp             EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH-HH-----------------------------------HH
T ss_pred             eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccc-hh-----------------------------------hh
Confidence            46799999999999996 4678999999876533221100 00                                   11


Q ss_pred             HHHHHHHHHHhcCCCCCe-EeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFI-HVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |...+.++    . ++++ .+-.++ ......+++|||++|++|.+++......+        ..        ....+..
T Consensus        48 e~~~~~~l----~-~~~i~~~~~~~-~~~~~~~~v~~~~~~~~L~~~l~~~~~~~--------~~--------~~~~~~~  105 (260)
T PF00069_consen   48 EIKILRRL----R-HPNIVQILDVF-QDDNYLYIVMEYCPGGSLQDYLQKNKPLS--------EE--------EILKIAY  105 (260)
T ss_dssp             HHHHHHHH----T-BTTBCHEEEEE-EESSEEEEEEEEETTEBHHHHHHHHSSBB--------HH--------HHHHHHH
T ss_pred             hhhccccc----c-ccccccccccc-ccccccccccccccccccccccccccccc--------cc--------ccccccc
Confidence            33333333    1 2222 122222 22567789999999999999887332221        11        1123556


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      ++..+|.+||+.|++|+|++|.||+++.++.++|+|||.+..
T Consensus       106 qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~  147 (260)
T PF00069_consen  106 QILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVK  147 (260)
T ss_dssp             HHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc
Confidence            778899999999999999999999999999999999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.57  E-value=2.5e-14  Score=137.33  Aligned_cols=153  Identities=14%  Similarity=0.128  Sum_probs=97.3

Q ss_pred             CCccccccccceeEEEEecC-----CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGSTLD-----GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~-----G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|+||.||+|...+     +..|++|+.+.......   ...+                               
T Consensus        10 ~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~---~~~~-------------------------------   55 (280)
T cd05043          10 LSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQ---VTLL-------------------------------   55 (280)
T ss_pred             EeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHH---HHHH-------------------------------
Confidence            45679999999999999754     78899998875432211   1111                               


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                         ..|...+.+    +.+.+-+.+...........++++||+++++|.+++.............+++      ..  ..
T Consensus        56 ---~~e~~~l~~----l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~------~~--~~  120 (280)
T cd05043          56 ---LQESCLLYG----LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALST------QQ--LV  120 (280)
T ss_pred             ---HHHHHHHHh----CCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCH------HH--HH
Confidence               122222211    1111111111111122356799999999999999886532110000001111      11  12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..++..++.+||+.|++|+|++|.||+++.++.++++|||+++.+
T Consensus       121 ~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~  167 (280)
T cd05043         121 HMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDL  167 (280)
T ss_pred             HHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccc
Confidence            35567888999999999999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.57  E-value=2.8e-15  Score=148.37  Aligned_cols=148  Identities=18%  Similarity=0.208  Sum_probs=92.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+..+........+  . ..+..++..+                         
T Consensus         9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~--~-~~E~~~l~~l-------------------------   60 (336)
T cd07849           9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQR--T-LREIKILRRF-------------------------   60 (336)
T ss_pred             EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHH--H-HHHHHHHHhC-------------------------
Confidence            356899999999999985 5899999998865322111000  0 0011111111                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       .+.|+.++.+.+.....        ......+++|||+++ ++.+.+... .        +++.        ....+..
T Consensus        61 -~h~niv~~~~~~~~~~~--------~~~~~~~lv~e~~~~-~l~~~~~~~-~--------l~~~--------~~~~i~~  113 (336)
T cd07849          61 -KHENIIGILDIIRPPSF--------ESFNDVYIVQELMET-DLYKLIKTQ-H--------LSND--------HIQYFLY  113 (336)
T ss_pred             -CCCCcCchhheeecccc--------cccceEEEEehhccc-CHHHHHhcC-C--------CCHH--------HHHHHHH
Confidence             12334333332211100        011345899999985 666555321 1        1111        1123556


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++..++.+||+.|++|+|+||.||+++.++.++++|||++....
T Consensus       114 ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  157 (336)
T cd07849         114 QILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD  157 (336)
T ss_pred             HHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence            77889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.57  E-value=2.2e-15  Score=146.82  Aligned_cols=144  Identities=20%  Similarity=0.229  Sum_probs=93.7

Q ss_pred             CCccccccccceeEEEEe-cCCC----EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGS----IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~----~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|++|+||+|+. .+|+    .||+|+..+........+                                   
T Consensus        11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~-----------------------------------   55 (303)
T cd05110          11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-----------------------------------   55 (303)
T ss_pred             eccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHH-----------------------------------
Confidence            346799999999999985 4564    579998775433211100                                   


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                        +..|...+.+    +.+ ++  +.+.+.. .....+++|||+++++|.+++.....       .+++..       . 
T Consensus        56 --~~~e~~~~~~----l~h-~n--iv~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~-------~~~~~~-------~-  111 (303)
T cd05110          56 --FMDEALIMAS----MDH-PH--LVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKD-------NIGSQL-------L-  111 (303)
T ss_pred             --HHHHHHHHHh----CCC-CC--cccEEEEEcCCCceeeehhcCCCCHHHHHHhccc-------CCCHHH-------H-
Confidence              1112221111    111 11  1222221 22345799999999999998764321       011111       1 


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+..+++.++.++|..|++|+|+||+||+++.++.++|+|||++..+.
T Consensus       112 ~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110         112 LNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE  160 (303)
T ss_pred             HHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccccc
Confidence            1245678889999999999999999999999999999999999998664

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.57  E-value=9.2e-15  Score=138.26  Aligned_cols=146  Identities=19%  Similarity=0.187  Sum_probs=96.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCC-chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPN-LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~-~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+.+|+|++|.||+++. .+|+.||+|..... ....   +...                                  +
T Consensus         4 ~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~---~~~~----------------------------------~   46 (256)
T cd08218           4 KVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPK---EREE----------------------------------S   46 (256)
T ss_pred             EEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChH---HHHH----------------------------------H
Confidence            356899999999999995 57899999986421 1110   0000                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .+|..-+.    .+.+ +  .+++++..  .....++||||++|++|.+.+....+..      .++.+.       . -
T Consensus        47 ~~e~~~l~----~l~~-~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~------~~~~~~-------~-~  105 (256)
T cd08218          47 RKEVAVLS----NMKH-P--NIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVL------FPEDQI-------L-D  105 (256)
T ss_pred             HHHHHHHH----hCCC-C--CeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCC------CCHHHH-------H-H
Confidence            11211111    1221 2  23333332  2356799999999999998876432211      111111       1 1


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..++.++|+.|++|+|++|.||+++.++.++++|||++..+..
T Consensus       106 ~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218         106 WFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             HHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence            345678899999999999999999999999999999999999887644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.57  E-value=5.9e-15  Score=148.72  Aligned_cols=187  Identities=18%  Similarity=0.200  Sum_probs=136.9

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchh--hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRH--VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~--~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+|-|.||.||.|+|+ -.-.||||.++.+..+  .+..+..+|+                                 
T Consensus       272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMK---------------------------------  318 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK---------------------------------  318 (1157)
T ss_pred             eeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHH---------------------------------
Confidence            468999999999999985 5678999998865432  2233333333                                 


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ...|.|++++.+.|...+.+             ||++|||..|.|.|++......              ....-++-.++
T Consensus       319 eikHpNLVqLLGVCT~EpPF-------------YIiTEfM~yGNLLdYLRecnr~--------------ev~avvLlyMA  371 (1157)
T KOG4278|consen  319 EIKHPNLVQLLGVCTHEPPF-------------YIITEFMCYGNLLDYLRECNRS--------------EVPAVVLLYMA  371 (1157)
T ss_pred             hhcCccHHHHhhhhccCCCe-------------EEEEecccCccHHHHHHHhchh--------------hcchhHHHHHH
Confidence            23577999999999887776             8999999999999999754321              11122334567


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHH-----------HHH---HHHHhcCHHH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAML-----------ASI---VHIVNGDWQS  384 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~-----------~~~---~~~~~~d~~~  384 (433)
                      .||..++.||...+|+||||-..|+||..+.-+|+.|||+++.+..++-.+-.           +.+   .-.+..|+|+
T Consensus       372 tQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWA  451 (1157)
T KOG4278|consen  372 TQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWA  451 (1157)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHH
Confidence            88999999999999999999999999999999999999999988765421110           001   0145779999


Q ss_pred             HHHHHHhcC---CC-CCCCChHHHHHHH
Q 013944          385 LVHSLTEMD---VV-RPGTNTLRVTMDL  408 (433)
Q Consensus       385 ~~~~l~~~g---~~-~~~~d~~~~~~~l  408 (433)
                      ++-.|.++.   +. -|++|...+...|
T Consensus       452 FGVLLWEIATYGMsPYPGidlSqVY~LL  479 (1157)
T KOG4278|consen  452 FGVLLWEIATYGMSPYPGIDLSQVYGLL  479 (1157)
T ss_pred             HHHHHHHHHhcCCCCCCCccHHHHHHHH
Confidence            998888753   32 2678877555433

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.57  E-value=3.3e-15  Score=142.34  Aligned_cols=144  Identities=22%  Similarity=0.307  Sum_probs=94.5

Q ss_pred             ccccccccceeEEEEec-----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          163 EPVAAASFGQVYRGSTL-----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~-----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +.||.|+||.||+|+++     .+..|+||+..+.......   .                                  +
T Consensus         5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~---~----------------------------------~   47 (259)
T PF07714_consen    5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEE---E----------------------------------E   47 (259)
T ss_dssp             EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHH---H----------------------------------H
T ss_pred             eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccc---e----------------------------------e
Confidence            46999999999999975     3578999999764332111   0                                  1


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      |..|.+.+.++    .+.+-+.+-.+.. .....++||||+++++|.+++.......      ++..+.        ..+
T Consensus        48 ~~~e~~~l~~l----~h~ni~~~~g~~~-~~~~~~lv~e~~~~g~L~~~L~~~~~~~------~~~~~~--------~~i  108 (259)
T PF07714_consen   48 FLNEIQILRKL----RHPNIVKLYGFCI-ENEPLFLVMEYCPGGSLDDYLKSKNKEP------LSEQQR--------LSI  108 (259)
T ss_dssp             HHHHHHHHHTH----SBTTBE-EEEEEE-SSSSEEEEEE--TTEBHHHHHHHTCTTT------SBHHHH--------HHH
T ss_pred             eeecccccccc----ccccccccccccc-cccccccccccccccccccccccccccc------cccccc--------ccc
Confidence            12233222222    1222122222221 3456799999999999999998651111      111111        124


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..+++.+|.|||+.+++|+|++|.||+++.++.+||+|||++...
T Consensus       109 ~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen  109 AIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPI  153 (259)
T ss_dssp             HHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            567889999999999999999999999999999999999998876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.56  E-value=2.6e-15  Score=146.54  Aligned_cols=145  Identities=19%  Similarity=0.255  Sum_probs=91.2

Q ss_pred             CccccccccceeEEEEec---CCCEEEEEEcCCCc------hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          162 EEPVAAASFGQVYRGSTL---DGSIVAVKVQRPNL------RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~---~G~~VAVKv~~p~~------~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      .+.||+|++|.||+|+..   +|+.||||+..+..      .+....++.+++                           
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~---------------------------   57 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLR---------------------------   57 (316)
T ss_pred             EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHH---------------------------
Confidence            356999999999999963   58999999987643      111111111111                           


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                                    +    +.+..-+.+...+..- ....++||||+++ ++.+.+........   ..+++        
T Consensus        58 --------------~----l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~---~~~~~--------  107 (316)
T cd07842          58 --------------E----LKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKR---VSIPP--------  107 (316)
T ss_pred             --------------h----cCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCC---cCcCH--------
Confidence                          1    1111111222222111 1446999999986 55555532211100   01111        


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc----CCcEEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS----SGQIGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~----~g~l~l~DFGl~~~l~  363 (433)
                      .....+..++..++.+||+.|++|+|++|.||+++.    +|.++++|||++..+.
T Consensus       108 ~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~  163 (316)
T cd07842         108 SMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFN  163 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccC
Confidence            122235567888999999999999999999999998    8999999999988654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.56  E-value=8.4e-15  Score=137.56  Aligned_cols=132  Identities=15%  Similarity=0.095  Sum_probs=89.1

Q ss_pred             cccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHH
Q 013944          168 ASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANAS  246 (433)
Q Consensus       168 gS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~  246 (433)
                      |++|.||+++. .+|+.||+|+.+.....  ..+...+.                                 ..-++|+.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~--~~~~~~~~---------------------------------~~~~~~i~   48 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY--SRERLTII---------------------------------PHCVPNMV   48 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhh--hhHHHHHH---------------------------------hcCCCcee
Confidence            88999999995 58999999988653211  00000000                                 00122444


Q ss_pred             HHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 013944          247 EFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLV  326 (433)
Q Consensus       247 ~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~  326 (433)
                      ++.+.+.+.             ...+++|||++|++|.+++......+        +..        ...+..++..++.
T Consensus        49 ~~~~~~~~~-------------~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~~--------~~~~~~ql~~~l~   99 (237)
T cd05576          49 CLHKYIVSE-------------DSVFLVLQHAEGGKLWSHISKFLNIP--------EEC--------VKRWAAEMVVALD   99 (237)
T ss_pred             ehhhheecC-------------CeEEEEEecCCCCCHHHHHHHhcCCC--------HHH--------HHHHHHHHHHHHH
Confidence            443333222             34599999999999998876432221        111        1224556778999


Q ss_pred             HHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          327 QLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       327 ~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++|+.|++|+|+||.||+++.++.++++|||.+..+.
T Consensus       100 ~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~  136 (237)
T cd05576         100 ALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE  136 (237)
T ss_pred             HHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccc
Confidence            9999999999999999999999999999999876543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.56  E-value=3.6e-15  Score=162.49  Aligned_cols=150  Identities=15%  Similarity=0.126  Sum_probs=93.2

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||.|+||.||+|+. .+++.||+|++.......  .+...+                                 
T Consensus        15 YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e--~~~~~~---------------------------------   59 (1021)
T PTZ00266         15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE--REKSQL---------------------------------   59 (1021)
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH--HHHHHH---------------------------------
Confidence            34456899999999999996 578899999876432110  000011                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                       ..|...+.+    +.+.   .|.+++..+    ....+|||||++|++|.+++.......    ..+++.        .
T Consensus        60 -~~EI~IL~~----L~HP---NIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~----g~L~E~--------~  119 (1021)
T PTZ00266         60 -VIEVNVMRE----LKHK---NIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMF----GKIEEH--------A  119 (1021)
T ss_pred             -HHHHHHHHH----cCCC---CcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhcc----CCCCHH--------H
Confidence             112222211    1111   222333221    234689999999999999886421100    001111        1


Q ss_pred             HHHHHHHHHHHHHHHHHC-------CccccCCCCCceEEccC-----------------CcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLET-------GILHADPHPGNLRYTSS-----------------GQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~-------givH~DlhpgNilv~~~-----------------g~l~l~DFGl~~~l~  363 (433)
                      +..+..+|+.+|.+||..       +|+|+||||.|||++.+                 +.++|+|||++..+.
T Consensus       120 Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~  193 (1021)
T PTZ00266        120 IVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG  193 (1021)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence            123566788899999984       49999999999999642                 358999999987654

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.56  E-value=1.3e-14  Score=141.65  Aligned_cols=149  Identities=21%  Similarity=0.193  Sum_probs=95.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||.|++|.||+|+. .+|+.||+|+.+...... ....                                   .
T Consensus         9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~-----------------------------------~   52 (309)
T cd07845           9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPI-----------------------------------S   52 (309)
T ss_pred             eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcc-----------------------------------h
Confidence            33456799999999999996 579999999876432110 0000                                   0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      +..|...+.+    +.+..-+.+..++... ....++||||+++ +|.+++.....       .+++.        ....
T Consensus        53 ~~~E~~~l~~----l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-------~l~~~--------~~~~  112 (309)
T cd07845          53 SLREITLLLN----LRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPT-------PFSES--------QVKC  112 (309)
T ss_pred             hhHHHHHHHh----CCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhccc-------CCCHH--------HHHH
Confidence            0112222211    2222222222232221 2456999999985 67777653211       01111        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.++|..|++|+|++|+||+++.++.++|+|||++..+.
T Consensus       113 ~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845         113 LMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            56678889999999999999999999999999999999999988764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.56  E-value=2.1e-14  Score=135.45  Aligned_cols=181  Identities=17%  Similarity=0.135  Sum_probs=108.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||.|++|.||+++. .+|+.+++|.........  .+..-+...+.+++.+                         
T Consensus         4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~e~~~l~~l-------------------------   56 (256)
T cd08530           4 VLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ--KEREDAVNEIRILASV-------------------------   56 (256)
T ss_pred             EeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH--HHHHHHHHHHHHHHhC-------------------------
Confidence            356799999999999985 588999999876432111  0000000011111111                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       .+.|+.++.+.+..             ....++||||++|++|.+++.......    ....+        .....+..
T Consensus        57 -~~~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~----~~~~~--------~~~~~~~~  110 (256)
T cd08530          57 -NHPNIISYKEAFLD-------------GNKLCIVMEYAPFGDLSKAISKRKKKR----KLIPE--------QEIWRIFI  110 (256)
T ss_pred             -CCCCchhhhhhhcc-------------CCEEEEEehhcCCCCHHHHHHHHHhhc----CCCCH--------HHHHHHHH
Confidence             12233333333221             245699999999999999876421100    00011        11122455


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHH-----------HHHHHHHHHhcCHHHHHHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFA-----------MLASIVHIVNGDWQSLVHS  388 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~-----------~~~~~~~~~~~d~~~~~~~  388 (433)
                      ++..++.++|+.|++|+|++|.||+++.++.++++|||++..........           ...........|.++++..
T Consensus       111 ~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~  190 (256)
T cd08530         111 QLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCL  190 (256)
T ss_pred             HHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHH
Confidence            67889999999999999999999999999999999999887654321100           0000001124677777777


Q ss_pred             HHhcCC
Q 013944          389 LTEMDV  394 (433)
Q Consensus       389 l~~~g~  394 (433)
                      ++++-.
T Consensus       191 ~~~l~~  196 (256)
T cd08530         191 LYEMAT  196 (256)
T ss_pred             HHHHHh
Confidence            777633

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.56  E-value=5.9e-15  Score=143.21  Aligned_cols=152  Identities=22%  Similarity=0.275  Sum_probs=92.9

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchh-----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRH-----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~-----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.+|+|++|+||+|+.+ +|+.||||+.+.....     .+..++.+++       .+                    
T Consensus        11 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~-------~l--------------------   63 (302)
T cd07864          11 IIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILR-------QL--------------------   63 (302)
T ss_pred             eeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHH-------hC--------------------
Confidence            3568999999999999964 7899999988643221     1111111111       11                    


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                            .+.|+.++.+.+.....   +..+....+..+++|||++| .+.+.+.....       .++..+        .
T Consensus        64 ------~h~~i~~~~~~~~~~~~---~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-------~~~~~~--------~  118 (302)
T cd07864          64 ------NHRNIVNLKEIVTDKQD---ALDFKKDKGAFYLVFEYMDH-DLMGLLESGLV-------HFSEDH--------I  118 (302)
T ss_pred             ------CCCCeeeeeheecCcch---hhhccccCCcEEEEEcccCc-cHHHHHhcCCC-------CCCHHH--------H
Confidence                  12222222222211110   00000112356899999987 55555442210       011111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+..++..++.+||..|++|+|++|+||+++.++.++|+|||.+..+..
T Consensus       119 ~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  168 (302)
T cd07864         119 KSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNS  168 (302)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccC
Confidence            23456678899999999999999999999999999999999999886643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.56  E-value=8.4e-14  Score=146.55  Aligned_cols=145  Identities=18%  Similarity=0.219  Sum_probs=99.9

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|++|.||+|.+ .+..+++|+..+.....-..+-.                              ...-.+.
T Consensus       336 ~~~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~~~~~~~------------------------------~~~~~~~  384 (535)
T PRK09605        336 IPDHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRHPELDER------------------------------LRTERTR  384 (535)
T ss_pred             CccceeccCCcEEEEEEee-cCccceeEEEecccccchhHHHH------------------------------HHHHHHH
Confidence            4567899999999999986 45556666543321110000000                              0001134


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .|++.+.++.     .+.+..|.++.......++||||++|++|.+++...                        ..+..
T Consensus       385 ~E~~~l~~l~-----~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~~~------------------------~~~~~  435 (535)
T PRK09605        385 AEARLLSEAR-----RAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLEGN------------------------PELVR  435 (535)
T ss_pred             HHHHHHHhhc-----ccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHHHH------------------------HHHHH
Confidence            5666665553     244566777766566789999999999998776310                        12445


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ++..++.++|+.|++|+|+||+||++ .+++++++|||+++..+..
T Consensus       436 ~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~~~~  480 (535)
T PRK09605        436 KVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSDLI  480 (535)
T ss_pred             HHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccCCch
Confidence            67789999999999999999999999 6889999999999887654

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.56  E-value=1.3e-14  Score=139.23  Aligned_cols=147  Identities=20%  Similarity=0.319  Sum_probs=96.0

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+.. +|+.|+||.........  .+....+ .+..+.++                         .
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~-e~~~l~~~-------------------------~   55 (283)
T cd07830           4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW--EECMNLR-EVKSLRKL-------------------------N   55 (283)
T ss_pred             heeeccCCceEEEEEEECCCCcEEEEEEehhhccch--hHHHHHH-HHHHHHhc-------------------------c
Confidence            457999999999999964 68999999875432210  0000001 00011110                         1


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ++.|+..+.+.+...             ...++||||+ +++|.+.+....+..      +++..        ...+..+
T Consensus        56 ~h~~i~~~~~~~~~~-------------~~~~lv~e~~-~~~l~~~~~~~~~~~------~~~~~--------~~~~~~~  107 (283)
T cd07830          56 EHPNIVKLKEVFREN-------------DELYFVFEYM-EGNLYQLMKDRKGKP------FSESV--------IRSIIYQ  107 (283)
T ss_pred             CCCCchhHHHHhhcC-------------CcEEEEEecC-CCCHHHHHHhccccc------CCHHH--------HHHHHHH
Confidence            234555555555432             3449999999 678887775432110      11111        1224556


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++.+||+.|++|+|++|+||++++++.++|+|||.+.....
T Consensus       108 l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830         108 ILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             HHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence            78899999999999999999999999999999999999886654

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.56  E-value=1.5e-14  Score=143.61  Aligned_cols=151  Identities=20%  Similarity=0.301  Sum_probs=97.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+||+|++|+||+|+. .+|+.||||+.........  ...-+...+.++..+                         
T Consensus        19 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~E~~~l~~l-------------------------   71 (343)
T cd07851          19 NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAI--HAKRTYRELRLLKHM-------------------------   71 (343)
T ss_pred             EEEEeccCCceEEEEEEECCCCcEEEEEecccccchhh--HHHHHHHHHHHHHhc-------------------------
Confidence            457899999999999996 4789999998764321110  000011111122111                         


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                       ++.|+..+.+.+......       ......++||||+ |++|.+++... ..        ++..       . ..+..
T Consensus        72 -~h~~iv~~~~~~~~~~~~-------~~~~~~~lv~e~~-~~~L~~~~~~~-~l--------~~~~-------~-~~~~~  125 (343)
T cd07851          72 -DHENVIGLLDVFTPASSL-------EDFQDVYLVTHLM-GADLNNIVKCQ-KL--------SDDH-------I-QFLVY  125 (343)
T ss_pred             -cCCCHHHHHHHhhccccc-------cccccEEEEEecC-CCCHHHHHhcC-CC--------CHHH-------H-HHHHH
Confidence             334555555444322210       1112358999998 56888876531 11        1111       1 22456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..++.++|..|++|+|++|.||+++.+|+++|+|||++.....
T Consensus       126 ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~  170 (343)
T cd07851         126 QILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD  170 (343)
T ss_pred             HHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccc
Confidence            678899999999999999999999999999999999999887643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.56  E-value=4e-14  Score=125.80  Aligned_cols=195  Identities=22%  Similarity=0.221  Sum_probs=121.0

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      ..||.|++|+|-+-++ .+|+..|||-.+..+..+..                               .++..|+|..+ 
T Consensus        52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q-------------------------------~r~L~dldi~~-   99 (282)
T KOG0984|consen   52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQ-------------------------------KRLLMDLDIIM-   99 (282)
T ss_pred             hhhcCCccchhhheeeccCCeEEEEeeehhhcChHHH-------------------------------HHHHHhhhhhc-
Confidence            4699999999988885 59999999987654432110                               11112222111 


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhc--cCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLS--TGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                                 ...+-.....-|..  -+...++.||-++ .+|+.+-..-  ++..              ..+.++.-+
T Consensus       100 -----------r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~--------------ipE~vlGkI  153 (282)
T KOG0984|consen  100 -----------RTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGT--------------IPEDVLGKI  153 (282)
T ss_pred             -----------cCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCc--------------CchHHhhHh
Confidence                       01111111111211  2466799999887 5666554321  1111              112233345


Q ss_pred             HHHHHHHHHHHHHC-CccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHH----------------HHHHHHhc
Q 013944          318 NKGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLA----------------SIVHIVNG  380 (433)
Q Consensus       318 ~~~i~~~l~~lh~~-givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~----------------~~~~~~~~  380 (433)
                      +..+..+|.+||++ .++|||+||+|||++.+|++|+||||+++.+.++....+-.                .-.+.+..
T Consensus       154 a~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vks  233 (282)
T KOG0984|consen  154 AVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKS  233 (282)
T ss_pred             HHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeeh
Confidence            55677899999975 89999999999999999999999999999987654322100                01235567


Q ss_pred             CHHHHHHHHHhcCCCCCCCChHH-HHHHHHHHhhch
Q 013944          381 DWQSLVHSLTEMDVVRPGTNTLR-VTMDLEDALGEV  415 (433)
Q Consensus       381 d~~~~~~~l~~~g~~~~~~d~~~-~~~~l~~~l~~~  415 (433)
                      |.|+++-.+++|..++-.-+.|. --+.|..++.+.
T Consensus       234 DvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep  269 (282)
T KOG0984|consen  234 DVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEP  269 (282)
T ss_pred             hhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCC
Confidence            99999999999888765555432 223455566554

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.56  E-value=6.4e-15  Score=145.76  Aligned_cols=146  Identities=18%  Similarity=0.230  Sum_probs=91.6

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|... +|+.||||.........-  ....                                  +.
T Consensus        11 ~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~--~~~~----------------------------------~~   54 (337)
T cd07852          11 ILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT--DAQR----------------------------------TF   54 (337)
T ss_pred             HhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch--hhhh----------------------------------hh
Confidence            3568999999999999964 789999998753211100  0000                                  01


Q ss_pred             HHHHHHHHHHHhcCCCCC-eEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPF-IHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~-v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    .++++ +.+..++... ....++||||+++ +|.+++... ..+        +.      .  ...+
T Consensus        55 ~E~~~l~~l----~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~--------~~------~--~~~i  112 (337)
T cd07852          55 REIMFLQEL----GDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRAN-ILE--------DV------H--KRYI  112 (337)
T ss_pred             HHHHHHHHh----cCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcC-CCC--------HH------H--HHHH
Confidence            122111111    11111 1111111111 1235899999985 777766432 111        11      1  1225


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.++.+||..|++|+|++|+||+++.+|.++|+|||++..+..
T Consensus       113 ~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~  159 (337)
T cd07852         113 MYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE  159 (337)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence            56788899999999999999999999999999999999999887644

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=7.4e-16  Score=148.79  Aligned_cols=185  Identities=17%  Similarity=0.166  Sum_probs=115.5

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ...||.||||.|-.|..+ +.+.+|||+++.++--+ ..|...--.+-+++. +..+.+                     
T Consensus       354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLA-L~~kpp---------------------  410 (683)
T KOG0696|consen  354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLA-LPGKPP---------------------  410 (683)
T ss_pred             EEEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhhee-cCCCCc---------------------
Confidence            357999999999999854 56789999998765321 112221111101110 111111                     


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                         -+..+...|...             .+.+.||||+.||+|.=.+..-...        .|.        ..-+.+..
T Consensus       411 ---FL~qlHScFQTm-------------DRLyFVMEyvnGGDLMyhiQQ~GkF--------KEp--------~AvFYAaE  458 (683)
T KOG0696|consen  411 ---FLVQLHSCFQTM-------------DRLYFVMEYVNGGDLMYHIQQVGKF--------KEP--------VAVFYAAE  458 (683)
T ss_pred             ---hHHHHHHHhhhh-------------hheeeEEEEecCchhhhHHHHhccc--------CCc--------hhhhhhHH
Confidence               122233333322             3448999999999987655433221        111        11234556


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc--CHHHHHHHH-----------HHHHHHHhcCHHHHHH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM--ERKHQFAML-----------ASIVHIVNGDWQSLVH  387 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l--~~~~~~~~~-----------~~~~~~~~~d~~~~~~  387 (433)
                      |+.+|-+||+.||+.||||..|||++.+|.++|.||||++.-  +..+...+.           ..-.+...-|||+.+-
T Consensus       459 iaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GV  538 (683)
T KOG0696|consen  459 IAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGV  538 (683)
T ss_pred             HHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHH
Confidence            778999999999999999999999999999999999998752  222211111           1111233568999999


Q ss_pred             HHHhcCCCCCCCCh
Q 013944          388 SLTEMDVVRPGTNT  401 (433)
Q Consensus       388 ~l~~~g~~~~~~d~  401 (433)
                      .|++|-..++..|-
T Consensus       539 LLyEmlaGQpPFdG  552 (683)
T KOG0696|consen  539 LLYEMLAGQPPFDG  552 (683)
T ss_pred             HHHHHHcCCCCCCC
Confidence            99988777766554

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.55  E-value=8.2e-15  Score=140.81  Aligned_cols=141  Identities=21%  Similarity=0.302  Sum_probs=93.6

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||.|++|+||+|+. .+|..||||+.+....     ..+..++.+++       .+                     
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~-------~l---------------------   55 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLK-------EL---------------------   55 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHH-------hc---------------------
Confidence            45799999999999996 5899999998764321     11111221111       00                     


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                           .+.|+.++.+.+..             ....+++|||++ ++|.+++......      ...+..        ..
T Consensus        56 -----~~~~iv~~~~~~~~-------------~~~~~iv~e~~~-~~l~~~~~~~~~~------~~~~~~--------~~  102 (283)
T cd07835          56 -----NHPNIVRLLDVVHS-------------ENKLYLVFEFLD-LDLKKYMDSSPLT------GLDPPL--------IK  102 (283)
T ss_pred             -----CCCCccCHhheecc-------------CCeEEEEEeccC-cCHHHHHhhCCCC------CCCHHH--------HH
Confidence                 12233333333221             245599999996 5788877543210      011111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      -+..++..++.++|..|++|+|++|+||+++.++.++++|||++..+.
T Consensus       103 ~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~  150 (283)
T cd07835         103 SYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFG  150 (283)
T ss_pred             HHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence            245667889999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.55  E-value=6.1e-15  Score=142.49  Aligned_cols=144  Identities=21%  Similarity=0.263  Sum_probs=91.9

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|.. .+|+.||+|+.+....+....                                     .
T Consensus         7 y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~-------------------------------------~   49 (291)
T cd07870           7 YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPF-------------------------------------T   49 (291)
T ss_pred             eEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcH-------------------------------------H
Confidence            44567899999999999985 579999999876432211000                                     0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.+    +. +++  +++.+..  .....++||||++ +++.+.+....+.       ..+.       .+ .
T Consensus        50 ~~~e~~~l~~----l~-h~n--i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~-------~~~~-------~~-~  106 (291)
T cd07870          50 AIREASLLKG----LK-HAN--IVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGG-------LHPY-------NV-R  106 (291)
T ss_pred             HHHHHHHHHh----cC-CCC--EeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCC-------CCHH-------HH-H
Confidence            0112222222    11 122  2233322  2345799999997 4555554322110       0111       11 2


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..++..+|.+||..|++|+|+||+||+++.+|+++|+|||++...
T Consensus       107 ~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870         107 LFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEecccccccc
Confidence            34567888999999999999999999999999999999999987643

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.55  E-value=4.9e-15  Score=143.30  Aligned_cols=145  Identities=21%  Similarity=0.256  Sum_probs=95.5

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||.|++|.||+|+.+ +|+.|++|..+......   ...                                 .++.
T Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~---------------------------------~~~~   52 (293)
T cd07843           9 KLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE---GFP---------------------------------ITSL   52 (293)
T ss_pred             hhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc---cch---------------------------------hhHH
Confidence            4568999999999999964 78999999876432110   000                                 0011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      .|...+.++    . +++  +++++..  ..  ...+++|||+++ +|.+++.....       .+++..        ..
T Consensus        53 ~e~~~l~~l----~-h~n--i~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~-------~l~~~~--------~~  109 (293)
T cd07843          53 REINILLKL----Q-HPN--IVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQ-------PFLQSE--------VK  109 (293)
T ss_pred             HHHHHHHhc----C-CCC--EEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccC-------CCCHHH--------HH
Confidence            122222222    1 222  2333221  12  567999999985 88877754321       011111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..+|.+||..|++|+|++|+||+++.+|.++++|||++..+..
T Consensus       110 ~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843         110 CLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             HHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            3556788899999999999999999999999999999999999887654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.55  E-value=3.7e-14  Score=135.85  Aligned_cols=141  Identities=22%  Similarity=0.305  Sum_probs=96.8

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|++|.||+|+. .+|+.||+|+......     +....++.+++       .+                     
T Consensus         4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~-------~~---------------------   55 (282)
T cd07829           4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLK-------EL---------------------   55 (282)
T ss_pred             ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHH-------hc---------------------
Confidence            35699999999999996 4699999999876431     11112222222       11                     


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                           .+.|+.++.+.+.+.             ...++||||+++ +|.+++.....       .+++..       . .
T Consensus        56 -----~~~~i~~~~~~~~~~-------------~~~~~v~e~~~~-~l~~~i~~~~~-------~~~~~~-------~-~  101 (282)
T cd07829          56 -----KHPNIVKLLDVIHTE-------------RKLYLVFEYCDM-DLKKYLDKRPG-------PLSPNL-------I-K  101 (282)
T ss_pred             -----CCCCHHHHHhhhhcC-------------CceEEEecCcCc-CHHHHHHhhcc-------CCCHHH-------H-H
Confidence                 134555555544332             344899999985 89888864310       011111       1 1


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||..|++|+|++|.||+++.++.++|+|||.+.....
T Consensus       102 ~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~  150 (282)
T cd07829         102 SIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGI  150 (282)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCC
Confidence            2445677899999999999999999999999999999999999876643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.55  E-value=7.7e-15  Score=142.04  Aligned_cols=143  Identities=17%  Similarity=0.207  Sum_probs=90.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchh-hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+.||.|++|.||+|+. .+|+.||||..+..... ....                                     .+
T Consensus         6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~-------------------------------------~~   48 (294)
T PLN00009          6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPS-------------------------------------TA   48 (294)
T ss_pred             EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchH-------------------------------------HH
Confidence            346899999999999996 48999999987532111 0000                                     01


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.+    +.+ +  .+++++..  .....++||||+++ ++.+.+.......      ..        ......
T Consensus        49 ~~e~~~l~~----l~h-~--~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~------~~--------~~~~~~  106 (294)
T PLN00009         49 IREISLLKE----MQH-G--NIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFA------KN--------PRLIKT  106 (294)
T ss_pred             HHHHHHHHh----ccC-C--CEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCC------cC--------HHHHHH
Confidence            122222222    211 2  22333322  23567999999975 6766654322111      00        111123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEcc-CCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l  362 (433)
                      +..+++.++.+||+.|++|+|++|+||+++. ++.++++|||++...
T Consensus       107 ~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009        107 YLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF  153 (294)
T ss_pred             HHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence            4567888999999999999999999999985 467999999998754

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.55  E-value=7.2e-16  Score=138.74  Aligned_cols=146  Identities=17%  Similarity=0.225  Sum_probs=106.3

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.+|.|-++.|+.|. ..+.++++||+++|--...+.++++||+.+.                             
T Consensus        40 Yeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~-----------------------------   90 (338)
T KOG0668|consen   40 YEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLR-----------------------------   90 (338)
T ss_pred             HHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhcc-----------------------------
Confidence            3345689999999999998 4688999999999988899999998887421                             


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         -+.|+..+.+...+.           .|....|+.||++..+...+-...              ...++     ...
T Consensus        91 ---gg~NIi~L~DiV~Dp-----------~SktpaLiFE~v~n~Dfk~ly~tl--------------~d~dI-----ryY  137 (338)
T KOG0668|consen   91 ---GGPNIIKLLDIVKDP-----------ESKTPSLIFEYVNNTDFKQLYPTL--------------TDYDI-----RYY  137 (338)
T ss_pred             ---CCCCeeehhhhhcCc-----------cccCchhHhhhhccccHHHHhhhh--------------chhhH-----HHH
Confidence               123454444443322           233446889999887655443211              01111     234


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccC-CcEEEEecccccccCHHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l~~~~  366 (433)
                      ..++..+|.++|+.||+|||+||.|++++.. .+++|+|||++..+.+..
T Consensus       138 ~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~  187 (338)
T KOG0668|consen  138 IYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK  187 (338)
T ss_pred             HHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence            5567789999999999999999999999865 579999999998876654

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.55  E-value=1.3e-14  Score=142.92  Aligned_cols=147  Identities=19%  Similarity=0.246  Sum_probs=99.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||.|++|.||+|+. .+|+.||||+..+...     +.+..++.+++       .+                    
T Consensus         4 i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~-------~l--------------------   56 (330)
T cd07834           4 LLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLR-------HL--------------------   56 (330)
T ss_pred             eeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHH-------hc--------------------
Confidence            346899999999999996 4699999998775432     11122222221       11                    


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                            .+.|+..+.+.+.....        ...+..+++|||+++ +|.+++......+        +.        ..
T Consensus        57 ------~~~~i~~~~~~~~~~~~--------~~~~~~~lv~e~~~~-~l~~~l~~~~~l~--------~~--------~~  105 (330)
T cd07834          57 ------RHENIIGLLDILRPPSP--------EDFNDVYIVTELMET-DLHKVIKSPQPLT--------DD--------HI  105 (330)
T ss_pred             ------CCcchhhhhhhhcccCc--------ccccceEEEecchhh-hHHHHHhCCCCCC--------HH--------HH
Confidence                  24455555554433221        011245899999985 7777765332111        11        11


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..+..++..++.+||..|++|+|+||+||+++.++.++|+|||++......
T Consensus       106 ~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834         106 QYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence            235667888999999999999999999999999999999999999877654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.54  E-value=8.1e-15  Score=151.90  Aligned_cols=202  Identities=14%  Similarity=0.075  Sum_probs=136.2

Q ss_pred             cCCccccccccceeEEEEe-cCC----CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          160 ISEEPVAAASFGQVYRGST-LDG----SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G----~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      .+.+.||+|.||.||+|.+ ..|    .+|||||........  +-..+|.....+                        
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~--~s~e~LdeAl~m------------------------  752 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPK--ASIELLDEALRM------------------------  752 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCch--hhHHHHHHHHHH------------------------
Confidence            3456899999999999996 445    578999876432221  111222211111                        


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                         +..+|.|+.|+.+.+..              +...||++|+++|.|.|+.+..+..               +..+..
T Consensus       753 ---asldHpnl~RLLgvc~~--------------s~~qlvtq~mP~G~LlDyvr~hr~~---------------igsq~l  800 (1177)
T KOG1025|consen  753 ---ASLDHPNLLRLLGVCML--------------STLQLVTQLMPLGCLLDYVREHRDN---------------IGSQDL  800 (1177)
T ss_pred             ---hcCCCchHHHHhhhccc--------------chHHHHHHhcccchHHHHHHHhhcc---------------ccHHHH
Confidence               13467788888776532              3347899999999999999865321               111112


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      -....||+.++.|||+++++||||-..|+||..-..+++.|||+++.+.++...-...    ..+--...|+-..+....
T Consensus       801 Lnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~----~gK~pikwmale~i~~~~  876 (1177)
T KOG1025|consen  801 LNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAP----GGKVPIKWMALESIRIRK  876 (1177)
T ss_pred             HHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccccccc----ccccCcHHHHHHHhhccC
Confidence            2355678899999999999999999999999998999999999999887655431111    122234456666667777


Q ss_pred             CCCCCChHHHHHHHHHHh---hchhccCCCCC
Q 013944          395 VRPGTNTLRVTMDLEDAL---GEVEFKDGIPD  423 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l---~~~~~~~~~~~  423 (433)
                      .++..|+|.|.--+=++|   +++.++.+.++
T Consensus       877 ~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e  908 (1177)
T KOG1025|consen  877 YTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE  908 (1177)
T ss_pred             CCchhhhhhhhhhHHHHHhcCCCccCCCCHHH
Confidence            788888888887776665   34444444443

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.54  E-value=8e-16  Score=140.21  Aligned_cols=149  Identities=21%  Similarity=0.296  Sum_probs=97.5

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEc-----CCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQ-----RPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~-----~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ...+|+|.||.|++|+. ++|+.||+|..     +.+......++++++..                             
T Consensus        22 ~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~-----------------------------   72 (376)
T KOG0669|consen   22 LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQL-----------------------------   72 (376)
T ss_pred             HHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHH-----------------------------
Confidence            45799999999999995 57889999853     23434444444444441                             


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                          ..|.|...+.+.|+....-   .  -...+..+||+.+|+ .+|.-++....             .+....  -+.
T Consensus        73 ----lkHenv~nliEic~tk~Tp---~--~r~r~t~ylVf~~ce-hDLaGlLsn~~-------------vr~sls--~Ik  127 (376)
T KOG0669|consen   73 ----LKHENVVNLIEICRTKATP---T--NRDRATFYLVFDFCE-HDLAGLLSNRK-------------VRFSLS--EIK  127 (376)
T ss_pred             ----hcchhHHHHHHHHhhccCC---c--ccccceeeeeHHHhh-hhHHHHhcCcc-------------ccccHH--HHH
Confidence                1233444444444322110   0  012344699999998 35554443210             111111  123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      -+.+++..+|.++|+..++|||.||.|+||+.+|.++|+|||+++.++.
T Consensus       128 k~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~  176 (376)
T KOG0669|consen  128 KVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFST  176 (376)
T ss_pred             HHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence            4667788899999999999999999999999999999999999987653

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.54  E-value=4.8e-15  Score=142.28  Aligned_cols=147  Identities=20%  Similarity=0.255  Sum_probs=94.2

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchh-hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRH-VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~-~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .+.||+|++|.||+|+.. +|+.||+|+.+..... ....                                     ++.
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~-------------------------------------~~~   46 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPI-------------------------------------TAI   46 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchH-------------------------------------HHH
Confidence            457999999999999964 6899999998764311 0000                                     011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      .|...+.++    .+..-+.+..++... ....++||||+++ +|.+++.....       .+++.+        ...+.
T Consensus        47 ~e~~~l~~l----~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-------~~~~~~--------~~~i~  106 (287)
T cd07840          47 REIKLLQKL----RHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEV-------KFTESQ--------IKCYM  106 (287)
T ss_pred             HHHHHHHhc----cCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCC-------CCCHHH--------HHHHH
Confidence            122222221    111111122222211 2567999999985 77777653210       111111        12355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .++..++.+||..|++|+|++|+||+++++|.++++|||++..+...
T Consensus       107 ~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840         107 KQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             HHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence            66788999999999999999999999999999999999998877543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.54  E-value=7.1e-15  Score=142.21  Aligned_cols=141  Identities=21%  Similarity=0.327  Sum_probs=94.8

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||.|++|.||+|+. .+|+.|++|+......+..    ..                                  +..
T Consensus        17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~----~~----------------------------------~~~   58 (292)
T cd06644          17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----ED----------------------------------YMV   58 (292)
T ss_pred             hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHH----HH----------------------------------HHH
Confidence            45699999999999996 4689999999865432211    00                                  111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+..    +.+ +  .+++++.  ...+..++||||++|++|..++......       +.+.        ....+.
T Consensus        59 e~~~l~~----l~h-~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~-------l~~~--------~~~~~~  116 (292)
T cd06644          59 EIEILAT----CNH-P--YIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRG-------LTEP--------QIQVIC  116 (292)
T ss_pred             HHHHHHh----CCC-C--cEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCC-------CCHH--------HHHHHH
Confidence            2222221    211 1  2233332  2345679999999999998776432110       1111        112355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+++.++.++|+.|++|+|+||.||+++.+|.++|+|||++...
T Consensus       117 ~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644         117 RQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             HHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceec
Confidence            66788999999999999999999999999999999999987654

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.54  E-value=2.8e-14  Score=139.43  Aligned_cols=80  Identities=14%  Similarity=0.149  Sum_probs=62.8

Q ss_pred             ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC
Q 013944          270 KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG  349 (433)
Q Consensus       270 ~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g  349 (433)
                      ..+++|||+++++|.+++....+..      +++.        ....+..++..++.+||+.|++|+|++|+||+++.+|
T Consensus        73 ~~~~~~e~~~~~~l~~~l~~~~~~~------~~~~--------~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~  138 (314)
T cd08216          73 ELYVVSPLMAYGSCEDLLKTHFPEG------LPEL--------AIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG  138 (314)
T ss_pred             eEEEEEeccCCCCHHHHHHHhcccC------CCHH--------HHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC
Confidence            4599999999999999887432111      1111        1123566788999999999999999999999999999


Q ss_pred             cEEEEecccccccC
Q 013944          350 QIGFLDFGLLCRME  363 (433)
Q Consensus       350 ~l~l~DFGl~~~l~  363 (433)
                      .+++.|||.+..+.
T Consensus       139 ~~kl~d~~~~~~~~  152 (314)
T cd08216         139 KVVLSGLRYSVSMI  152 (314)
T ss_pred             ceEEecCccceeec
Confidence            99999999887553

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.54  E-value=1.6e-14  Score=138.76  Aligned_cols=78  Identities=22%  Similarity=0.222  Sum_probs=59.5

Q ss_pred             eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc
Q 013944          271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ  350 (433)
Q Consensus       271 ~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~  350 (433)
                      .+++|||+++ +|.+++......      ..++..        ...+..+++.++.+||..|++|+|++|+||+++.++.
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~------~l~~~~--------~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~  145 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKP------GLPPET--------IKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQ  145 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCC------CCCHHH--------HHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCC
Confidence            6899999986 687776543211      011111        1224566788999999999999999999999999999


Q ss_pred             EEEEecccccccC
Q 013944          351 IGFLDFGLLCRME  363 (433)
Q Consensus       351 l~l~DFGl~~~l~  363 (433)
                      ++|+|||.+..+.
T Consensus       146 ~~l~dfg~~~~~~  158 (287)
T cd07838         146 VKIADFGLARIYS  158 (287)
T ss_pred             EEEeccCcceecc
Confidence            9999999987764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.54  E-value=7.5e-15  Score=143.26  Aligned_cols=147  Identities=20%  Similarity=0.250  Sum_probs=91.9

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||+|+.......... ...                                  ++.
T Consensus        19 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~-~~~----------------------------------~~~   63 (307)
T cd06607          19 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE-KWQ----------------------------------DII   63 (307)
T ss_pred             hheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHH-HHH----------------------------------HHH
Confidence            346799999999999996 47899999987532111000 000                                  011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .|...+.    .+.+..-+.+...+. .....++||||++| ++.+.+......       .++..        ...+..
T Consensus        64 ~Ei~~l~----~l~h~niv~~~~~~~-~~~~~~lv~e~~~g-~l~~~~~~~~~~-------l~~~~--------~~~~~~  122 (307)
T cd06607          64 KEVRFLQ----QLRHPNTIEYKGCYL-REHTAWLVMEYCLG-SASDILEVHKKP-------LQEVE--------IAAICH  122 (307)
T ss_pred             HHHHHHH----hCCCCCEEEEEEEEE-eCCeEEEEHHhhCC-CHHHHHHHcccC-------CCHHH--------HHHHHH
Confidence            1221111    122222222222222 23566899999985 555555422110       11111        122456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++..++.++|..|++|+|++|+||+++.+|.++|+|||++....
T Consensus       123 ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607         123 GALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             HHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            78889999999999999999999999999999999999987654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.53  E-value=9.3e-15  Score=148.60  Aligned_cols=141  Identities=21%  Similarity=0.191  Sum_probs=97.6

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ...+|.|||+.|.++.. .+++..+||++.....+. ..++.++.                                +..
T Consensus       327 ~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~-~~e~~~~~--------------------------------~~~  373 (612)
T KOG0603|consen  327 REELGEGSFSAVKYCESSPTDQEPAVKIISKRADDN-QDEIPISL--------------------------------LVR  373 (612)
T ss_pred             ccccCCCCccceeeeeccccccchhheecccccccc-ccccchhh--------------------------------hhc
Confidence            34599999999999995 588999999886542211 11111111                                122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .+.|+....+.+.+..+             .++|||.+.|+-+.+.+...+..                . ....-+..+
T Consensus       374 ~h~niv~~~~v~~~~~~-------------~~~v~e~l~g~ell~ri~~~~~~----------------~-~e~~~w~~~  423 (612)
T KOG0603|consen  374 DHPNIVKSHDVYEDGKE-------------IYLVMELLDGGELLRRIRSKPEF----------------C-SEASQWAAE  423 (612)
T ss_pred             CCCcceeecceecCCce-------------eeeeehhccccHHHHHHHhcchh----------------H-HHHHHHHHH
Confidence            34455555544444433             49999999998877766432110                0 111124556


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEE-ccCCcEEEEecccccccCHH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRY-TSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv-~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +..++.+||++|+||||+||+|||+ +..|.++|+|||.++.+.++
T Consensus       424 lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  424 LVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             HHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            7789999999999999999999999 58899999999999999876

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.53  E-value=5.3e-14  Score=134.18  Aligned_cols=86  Identities=16%  Similarity=0.255  Sum_probs=63.6

Q ss_pred             CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCceEEc
Q 013944          268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYT  346 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~-~givH~DlhpgNilv~  346 (433)
                      ....+++|||++|++|.+++.......    ..+++.       .++ -+..+++.++.++|. .|++|+|++|.||+++
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~----~~~~~~-------~~~-~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~  148 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKK----QRFTEE-------RIW-NIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG  148 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhcc----CCCCHH-------HHH-HHHHHHHHHHHHhccCCceeecCCCHHHEEEC
Confidence            356799999999999998875321100    011111       112 244567889999996 7899999999999999


Q ss_pred             cCCcEEEEecccccccCHH
Q 013944          347 SSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       347 ~~g~l~l~DFGl~~~l~~~  365 (433)
                      .++.++++|||++......
T Consensus       149 ~~~~~~l~dfg~~~~~~~~  167 (269)
T cd08528         149 EDDKVTITDFGLAKQKQPE  167 (269)
T ss_pred             CCCcEEEecccceeecccc
Confidence            9999999999998876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.53  E-value=7.7e-15  Score=142.70  Aligned_cols=151  Identities=21%  Similarity=0.250  Sum_probs=92.7

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchh-----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      |...+.||+|++|.||+|+. .+|+.||||........     ....++.+++       .+                  
T Consensus        14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~-------~l------------------   68 (310)
T cd07865          14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQ-------LL------------------   68 (310)
T ss_pred             eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHH-------hC------------------
Confidence            44567899999999999996 47999999976532211     1111111111       11                  


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                              .+.|+.++.+.+....     .......+..++||||+.+ ++.+.+.....       ..++.       .
T Consensus        69 --------~h~~iv~~~~~~~~~~-----~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-------~~~~~-------~  120 (310)
T cd07865          69 --------KHENVVNLIEICRTKA-----TPYNRYKGSFYLVFEFCEH-DLAGLLSNKNV-------KFTLS-------E  120 (310)
T ss_pred             --------CCCCccceEEEEeccc-----ccccCCCceEEEEEcCCCc-CHHHHHHhccc-------CCCHH-------H
Confidence                    1112222211111000     0011123455999999975 66666543210       01111       1


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      + ..+..+++.++.+||+.|++|+|++|+||+++.++.++|+|||++..+.
T Consensus       121 ~-~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  170 (310)
T cd07865         121 I-KKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS  170 (310)
T ss_pred             H-HHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence            1 2355678889999999999999999999999999999999999987653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.53  E-value=1.1e-14  Score=143.56  Aligned_cols=78  Identities=14%  Similarity=0.152  Sum_probs=60.3

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...+++|||+.|+++.+++.......      .++.        ....+..++..+|.++|+.|++|+|+||+||+++.+
T Consensus        72 ~~~~~v~e~~~~~~l~~~l~~~~~~~------~~~~--------~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~  137 (328)
T cd08226          72 SWLWVISPFMAYGSANSLLKTYFPEG------MSEA--------LIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD  137 (328)
T ss_pred             CceEEEEecccCCCHHHHHHhhcccC------CCHH--------HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC
Confidence            45699999999999999876532110      1111        112355678889999999999999999999999999


Q ss_pred             CcEEEEeccccc
Q 013944          349 GQIGFLDFGLLC  360 (433)
Q Consensus       349 g~l~l~DFGl~~  360 (433)
                      +.+++.|||.+.
T Consensus       138 ~~~~~~~~~~~~  149 (328)
T cd08226         138 GLVSLSGLSHLY  149 (328)
T ss_pred             CcEEEechHHHh
Confidence            999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.53  E-value=7.2e-15  Score=141.41  Aligned_cols=93  Identities=13%  Similarity=0.140  Sum_probs=63.8

Q ss_pred             CCceEEEeeccCCCCcchhhhhccCCCC-CCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc
Q 013944          268 SRKRVLTMEWMVGESPTDLISLSTGSSV-DGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT  346 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~  346 (433)
                      ....+++|||++|++|.+++........ ...........+.... + ..+..++..++.++|+.|++|+|++|+||+++
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~  156 (280)
T cd05092          79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQ-M-LAIASQIASGMVYLASLHFVHRDLATRNCLVG  156 (280)
T ss_pred             CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHH-H-HHHHHHHHHHHHHHHHCCeecccccHhhEEEc
Confidence            3567999999999999999865321100 0000000000111111 1 22456788899999999999999999999999


Q ss_pred             cCCcEEEEeccccccc
Q 013944          347 SSGQIGFLDFGLLCRM  362 (433)
Q Consensus       347 ~~g~l~l~DFGl~~~l  362 (433)
                      .++.++|+|||++..+
T Consensus       157 ~~~~~kL~dfg~~~~~  172 (280)
T cd05092         157 QGLVVKIGDFGMSRDI  172 (280)
T ss_pred             CCCCEEECCCCceeEc
Confidence            9999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=5e-14  Score=137.65  Aligned_cols=146  Identities=21%  Similarity=0.254  Sum_probs=108.3

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|.||.|++|++ .|+.||||+....-+....+|-+|....                               ...
T Consensus       216 ~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~SWfrEtEIYqTv-------------------------------mLR  263 (513)
T KOG2052|consen  216 QEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDERSWFRETEIYQTV-------------------------------MLR  263 (513)
T ss_pred             EEEecCccccceeeccc-cCCceEEEEecccchhhhhhHHHHHHHH-------------------------------Hhc
Confidence            56899999999999998 6999999999877677766666555531                               234


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      |.|+..|...=....         ...|+.+||++|-+.|+|.|++... .++              .. .++. ++..+
T Consensus       264 HENILgFIaaD~~~~---------gs~TQLwLvTdYHe~GSL~DyL~r~-tv~--------------~~-~ml~-LalS~  317 (513)
T KOG2052|consen  264 HENILGFIAADNKDN---------GSWTQLWLVTDYHEHGSLYDYLNRN-TVT--------------TE-GMLK-LALSI  317 (513)
T ss_pred             cchhhhhhhccccCC---------CceEEEEEeeecccCCcHHHHHhhc-cCC--------------HH-HHHH-HHHHH
Confidence            568888765321111         1347889999999999999999742 111              11 1112 34456


Q ss_pred             HHHHHHHHH--------CCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          322 EATLVQLLE--------TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       322 ~~~l~~lh~--------~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +++|.+||.        -.|-|||+|.-||||.++|...|.|+|++...+..
T Consensus       318 AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~  369 (513)
T KOG2052|consen  318 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD  369 (513)
T ss_pred             hhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc
Confidence            789999996        35999999999999999999999999998766443

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=5e-15  Score=144.21  Aligned_cols=208  Identities=19%  Similarity=0.220  Sum_probs=137.5

Q ss_pred             CccccccccceeEEEE-ecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..-+|.|+|+.||+|. +...+-||||+-.-+-.-  ..+-                           .         .+
T Consensus       468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~W--rdEK---------------------------K---------eN  509 (775)
T KOG1151|consen  468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNW--RDEK---------------------------K---------EN  509 (775)
T ss_pred             HHHhccccHHHHHHhcccchhheeeEeeehhccch--hhHh---------------------------h---------hh
Confidence            3469999999999998 567889999986432111  0000                           0         01


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccC---CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLS---RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~---~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      =+++..+-.+..+...+..+.+.|..++   ...|-|+|||+|.+|+-+++..+-.+        +++        ...+
T Consensus       510 YhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmS--------EKE--------ARSI  573 (775)
T KOG1151|consen  510 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMS--------EKE--------ARSI  573 (775)
T ss_pred             HHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhh--------HHH--------HHHH
Confidence            1112222333344445556667776654   55689999999999998887654332        111        1235


Q ss_pred             HHHHHHHHHHHHH--CCccccCCCCCceEEcc---CCcEEEEecccccccCHHHHHHHHHH-HHHHHhcCHHHHHHHHHh
Q 013944          318 NKGVEATLVQLLE--TGILHADPHPGNLRYTS---SGQIGFLDFGLLCRMERKHQFAMLAS-IVHIVNGDWQSLVHSLTE  391 (433)
Q Consensus       318 ~~~i~~~l~~lh~--~givH~DlhpgNilv~~---~g~l~l~DFGl~~~l~~~~~~~~~~~-~~~~~~~d~~~~~~~l~~  391 (433)
                      ..+|..+|.||.+  ..|+|-||||||||+-.   -|.++|.|||+++.++++.-.....+ +..-..+.||.+....+-
T Consensus       574 iMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFv  653 (775)
T KOG1151|consen  574 IMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFV  653 (775)
T ss_pred             HHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceee
Confidence            5567889999986  57999999999999853   48999999999999876543322221 112345678888877766


Q ss_pred             cCCCCC----CCChHHHHHHHHHHh-hchhccCCCCC
Q 013944          392 MDVVRP----GTNTLRVTMDLEDAL-GEVEFKDGIPD  423 (433)
Q Consensus       392 ~g~~~~----~~d~~~~~~~l~~~l-~~~~~~~~~~~  423 (433)
                      .|.-+|    .+|+|+++..++.-| |+..|+...+.
T Consensus       654 VgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ  690 (775)
T KOG1151|consen  654 VGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ  690 (775)
T ss_pred             cCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence            664444    589999888776444 77788765543

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.52  E-value=4.5e-15  Score=160.39  Aligned_cols=143  Identities=22%  Similarity=0.329  Sum_probs=99.6

Q ss_pred             CCccccccccceeEEEE-ecCCCEEEEEEcC--CCch---hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGS-TLDGSIVAVKVQR--PNLR---HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~--p~~~---~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      -...||.|-||+||.|. ..+|+-.|||-++  |+..   ..+..++.++.       .+                    
T Consensus      1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE-------~l-------------------- 1291 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLE-------GL-------------------- 1291 (1509)
T ss_pred             cccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHH-------hc--------------------
Confidence            34579999999999999 5789999999544  2211   11122222211       11                    


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                            -|.|+.++             -.++..-.+.+|-||||+||+|.+++...+..                ..-+.
T Consensus      1292 ------nHpNlV~Y-------------yGVEvHRekv~IFMEyC~~GsLa~ll~~gri~----------------dE~vt 1336 (1509)
T KOG4645|consen 1292 ------NHPNLVRY-------------YGVEVHREKVYIFMEYCEGGSLASLLEHGRIE----------------DEMVT 1336 (1509)
T ss_pred             ------cCcccccc-------------CceeecHHHHHHHHHHhccCcHHHHHHhcchh----------------hhhHH
Confidence                  22233322             22222334558999999999999998754211                11233


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..+..++..++.+||++||||||+||.||+++.+|-+|+.|||.+..+...
T Consensus      1337 ~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1337 RVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            456777889999999999999999999999999999999999999988654

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=2.1e-14  Score=135.23  Aligned_cols=143  Identities=19%  Similarity=0.207  Sum_probs=93.9

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHH-HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRD-IYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~D-l~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      +.+|.|.||.|-.++- .+|+.+|+|+++..+--  .+| ..---.+-++++.                          .
T Consensus       174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKevii--akdEVAHTlTE~RVL~~--------------------------~  225 (516)
T KOG0690|consen  174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVII--AKDEVAHTLTENRVLQN--------------------------C  225 (516)
T ss_pred             HHhcCCccceEEEEeecccCceeehhhhhhhhee--ehHHhhhhhhHHHHHHh--------------------------c
Confidence            5799999999999995 58999999998865421  111 0000000000000                          0


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .|.-+..+.=.|..             ..+.|.||||..||.|.-.+...+..+        +..        .++....
T Consensus       226 ~HPFLt~LKYsFQt-------------~drlCFVMeyanGGeLf~HLsrer~Fs--------E~R--------tRFYGaE  276 (516)
T KOG0690|consen  226 RHPFLTSLKYSFQT-------------QDRLCFVMEYANGGELFFHLSRERVFS--------EDR--------TRFYGAE  276 (516)
T ss_pred             cCcHHHHhhhhhcc-------------CceEEEEEEEccCceEeeehhhhhccc--------chh--------hhhhhHH
Confidence            11111111111222             235599999999999987776554433        111        1234455


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      |..+|.|||+.+|+.||+|-.|+|++.||.+||.|||+++.-
T Consensus       277 IvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~  318 (516)
T KOG0690|consen  277 IVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE  318 (516)
T ss_pred             HHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence            778999999999999999999999999999999999998753

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.52  E-value=7.3e-14  Score=133.37  Aligned_cols=149  Identities=17%  Similarity=0.121  Sum_probs=93.9

Q ss_pred             CccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|++|.||+|.+.    +|+.||||+.+.........+  .                                  
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~--~----------------------------------   47 (273)
T cd05074           4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIE--E----------------------------------   47 (273)
T ss_pred             hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHH--H----------------------------------
Confidence            457999999999999853    478999999876543211100  0                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccC--------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLS--------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                      +..|.+.+.+    +.   +-.+.+.+....        ...++++||+++++|.+++.......  ....++..     
T Consensus        48 ~~~E~~~l~~----l~---h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~l~~~-----  113 (273)
T cd05074          48 FLREAACMKE----FD---HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGE--EPFTLPLQ-----  113 (273)
T ss_pred             HHHHHHHHhc----CC---CCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccC--CCCCCCHH-----
Confidence            0112221111    11   112333332211        12378899999999988775322100  00001111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                         ....+..+++.++.++|+.|++|+|++|.||+++.++.++++|||.+..+.
T Consensus       114 ---~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~  164 (273)
T cd05074         114 ---TLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIY  164 (273)
T ss_pred             ---HHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccccccc
Confidence               112355668889999999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=2.5e-14  Score=144.45  Aligned_cols=185  Identities=19%  Similarity=0.236  Sum_probs=120.4

Q ss_pred             cccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          164 PVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       164 pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .+|-|+||.||+|+.+ ++-..|-|++.-.-.+..                        ..++-|  -.+..++|    |
T Consensus        39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEEL------------------------EDylVE--IeILa~Cd----H   88 (1187)
T KOG0579|consen   39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEEL------------------------EDYLVE--IEILAECD----H   88 (1187)
T ss_pred             hhcCccchhhhhhhcccchhhhhhhhhcccchhHH------------------------hhhhhh--hhhhhcCC----C
Confidence            5899999999999854 444556676543222211                        011100  01122333    6


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      .++..+.+.|-             +.+..++..|||.||-++.++-... ++.        +        .-+.++..++
T Consensus        89 P~ivkLl~ayy-------------~enkLwiliEFC~GGAVDaimlEL~r~Lt--------E--------~QIqvvc~q~  139 (1187)
T KOG0579|consen   89 PVIVKLLSAYY-------------FENKLWILIEFCGGGAVDAIMLELGRVLT--------E--------DQIQVVCYQV  139 (1187)
T ss_pred             hHHHHHHHHHh-------------ccCceEEEEeecCCchHhHHHHHhccccc--------h--------HHHHHHHHHH
Confidence            67777776552             3455589999999999887764321 111        1        1234677888


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH--HHHHHHH--HH--------------HHHhcCHH
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH--QFAMLAS--IV--------------HIVNGDWQ  383 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~--~~~~~~~--~~--------------~~~~~d~~  383 (433)
                      +.+|.|||+.+|+|||||.||||++-+|.++|.|||.+.......  |..++.+  ++              +-...|.|
T Consensus       140 ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiW  219 (1187)
T KOG0579|consen  140 LDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIW  219 (1187)
T ss_pred             HHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHH
Confidence            999999999999999999999999999999999999987654322  2222221  00              12356888


Q ss_pred             HHHHHHHhcCCC-CCCCChHHHHHH
Q 013944          384 SLVHSLTEMDVV-RPGTNTLRVTMD  407 (433)
Q Consensus       384 ~~~~~l~~~g~~-~~~~d~~~~~~~  407 (433)
                      +++-.|++|.-+ +|-.++..++..
T Consensus       220 SlGITLIEMAqiEPPHhelnpMRVl  244 (1187)
T KOG0579|consen  220 SLGITLIEMAQIEPPHHELNPMRVL  244 (1187)
T ss_pred             hhhhHHHHHhccCCCccccchHHHH
Confidence            999999998766 445565554433

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.52  E-value=4.7e-14  Score=136.84  Aligned_cols=147  Identities=22%  Similarity=0.262  Sum_probs=93.5

Q ss_pred             cCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|.||+|+.. +|+.||||..+........  ..+++.. ..+.+                         
T Consensus        18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~--~~~~~e~-~~~~~-------------------------   69 (296)
T cd06618          18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEEN--KRILMDL-DVVLK-------------------------   69 (296)
T ss_pred             eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHH--HHHHHHH-HHHHh-------------------------
Confidence            34578999999999999975 5999999998643211100  0011100 00000                         


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ...+.|+.++.+.+...             ...+++|||+.+ .+.++.....+       ..++.        ....+.
T Consensus        70 ~~~~~~i~~~~~~~~~~-------------~~~~~v~e~~~~-~l~~l~~~~~~-------~l~~~--------~~~~i~  120 (296)
T cd06618          70 SHDCPYIVKCYGYFITD-------------SDVFICMELMST-CLDKLLKRIQG-------PIPED--------ILGKMT  120 (296)
T ss_pred             ccCCCchHhhheeeecC-------------CeEEEEeeccCc-CHHHHHHHhcC-------CCCHH--------HHHHHH
Confidence            11234555555444322             345899999865 56665543211       01111        112355


Q ss_pred             HHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.++|. .|++|+|++|.||+++.++.++|+|||++..+.
T Consensus       121 ~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~  166 (296)
T cd06618         121 VAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV  166 (296)
T ss_pred             HHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence            678889999997 699999999999999999999999999987654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.52  E-value=6.4e-14  Score=138.35  Aligned_cols=77  Identities=22%  Similarity=0.267  Sum_probs=59.4

Q ss_pred             ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC
Q 013944          270 KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG  349 (433)
Q Consensus       270 ~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g  349 (433)
                      ..+++|||+. ++|.+++......+        +.        ....+..++..+|.+||..|++|+|+||+||+++.++
T Consensus        80 ~~~~~~e~~~-~~L~~~l~~~~~~~--------~~--------~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~  142 (332)
T cd07857          80 ELYLYEELME-ADLHQIIRSGQPLT--------DA--------HFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC  142 (332)
T ss_pred             cEEEEEeccc-CCHHHHHhcCCCCC--------HH--------HHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC
Confidence            4588999987 57877765332221        11        1123556788899999999999999999999999999


Q ss_pred             cEEEEecccccccC
Q 013944          350 QIGFLDFGLLCRME  363 (433)
Q Consensus       350 ~l~l~DFGl~~~l~  363 (433)
                      .++|+|||++..+.
T Consensus       143 ~~kl~Dfg~a~~~~  156 (332)
T cd07857         143 ELKICDFGLARGFS  156 (332)
T ss_pred             CEEeCcCCCceecc
Confidence            99999999987654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.51  E-value=9.5e-15  Score=134.21  Aligned_cols=181  Identities=20%  Similarity=0.167  Sum_probs=111.8

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ...||.|+||.|++-.. ++|+..|||.++-...+   .|.+-+.....                    ..+.     ..
T Consensus        69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~---keq~rll~e~d--------------------~~mk-----s~  120 (361)
T KOG1006|consen   69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE---KEQKRLLMEHD--------------------TVMK-----SS  120 (361)
T ss_pred             HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccch---HHHHHHHHHHH--------------------HHHh-----hc
Confidence            34699999999999985 58999999988865432   22211111111                    1111     23


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      +..|+++|.+.+=+.             +..|++||.++ .++..+-..--           ..++..+.+.++.-+...
T Consensus       121 ~cp~IVkfyGa~F~E-------------GdcWiCMELMd-~SlDklYk~vy-----------~vq~~~ipE~Ilg~Itva  175 (361)
T KOG1006|consen  121 NCPNIVKFYGALFSE-------------GDCWICMELMD-ISLDKLYKRVY-----------SVQKSRIPENILGHITVA  175 (361)
T ss_pred             CCcHHHHHhhhhhcC-------------CceeeeHHHHh-hhHHHHHHHHH-----------HHHhccCcHhhhhheeee
Confidence            556888888765222             34499999997 66665543210           001111222233333333


Q ss_pred             HHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHH---HHHH-----------HHHHhcCHHHH
Q 013944          321 VEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAM---LASI-----------VHIVNGDWQSL  385 (433)
Q Consensus       321 i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~---~~~~-----------~~~~~~d~~~~  385 (433)
                      ...+|.||-+ ..++|||+||+|||++..|.+||+|||+++++.++.....   ..-.           ..-+..|+|++
T Consensus       176 tV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSL  255 (361)
T KOG1006|consen  176 TVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSL  255 (361)
T ss_pred             ehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhh
Confidence            4568888864 6899999999999999999999999999998865432110   0000           01345677777


Q ss_pred             HHHHHhcCCC
Q 013944          386 VHSLTEMDVV  395 (433)
Q Consensus       386 ~~~l~~~g~~  395 (433)
                      +-.|++....
T Consensus       256 GITL~EvAtG  265 (361)
T KOG1006|consen  256 GITLYEVATG  265 (361)
T ss_pred             cceEeeeecC
Confidence            7777776544

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.51  E-value=2.3e-14  Score=141.55  Aligned_cols=154  Identities=19%  Similarity=0.153  Sum_probs=94.4

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+. .+|+.||||+.+.........+   .+.                 .+.    ....+.++..
T Consensus        14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~---~~~-----------------~~~----~~~~~~~~~~   69 (335)
T PTZ00024         14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK---DRQ-----------------LVG----MCGIHFTTLR   69 (335)
T ss_pred             hhcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc---chh-----------------hhc----ccccchhHHH
Confidence            45799999999999995 4799999998764322110000   000                 000    0000011122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.++    .+ +  .+++++..  .....+++|||++| +|.+++......+        +..        ...+.
T Consensus        70 E~~~l~~l----~h-~--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~--------~~~--------~~~~~  125 (335)
T PTZ00024         70 ELKIMNEI----KH-E--NIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLT--------ESQ--------VKCIL  125 (335)
T ss_pred             HHHHHHhC----CC-c--ceeeeeEEEecCCcEEEEEecccc-CHHHHHHhcCCCC--------HHH--------HHHHH
Confidence            32222222    11 1  22222222  23566999999985 7777765332211        111        12355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.+||..|++|+|++|+||+++.++.++++|||++..+.
T Consensus       126 ~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024        126 LQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             HHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecc
Confidence            678889999999999999999999999999999999999987654

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.51  E-value=4.2e-14  Score=140.37  Aligned_cols=152  Identities=19%  Similarity=0.186  Sum_probs=94.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCch---hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR---HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~---~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ...++||.|++|.||+|+. .+|+.||+|+....-.   ..+..++.+++       .+                     
T Consensus         8 ~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~-------~l---------------------   59 (342)
T cd07854           8 MDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIR-------RL---------------------   59 (342)
T ss_pred             EEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHH-------hc---------------------
Confidence            3467899999999999995 5799999997653221   12222222222       21                     


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                           .+.|+.++.+.+.....-. ...+..+  -...+++|||+++ +|.+++... ..        ++.        .
T Consensus        60 -----~h~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~l--------~~~--------~  115 (342)
T cd07854          60 -----DHDNIVKVYEVLGPSGSDL-TEDVGSLTELNSVYIVQEYMET-DLANVLEQG-PL--------SEE--------H  115 (342)
T ss_pred             -----CCCcchhhHhhhccccccc-ccccccccccceEEEEeecccc-cHHHHHHcC-CC--------CHH--------H
Confidence                 2234444443332211100 0000001  1235899999985 777665421 11        111        1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc-CCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l~  363 (433)
                      ...+..++..++.+||+.|++|+|+||+||+++. ++.++++|||++..+.
T Consensus       116 ~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~  166 (342)
T cd07854         116 ARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVD  166 (342)
T ss_pred             HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecC
Confidence            1235667888999999999999999999999974 5678999999987654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.51  E-value=6.5e-14  Score=144.86  Aligned_cols=92  Identities=25%  Similarity=0.321  Sum_probs=64.1

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCch----------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTH----------LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADP  338 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~Dl  338 (433)
                      +..+|||||+++++|.+++....+.....+..+          ......++  .....+..++..++.++|..|++|+|+
T Consensus       258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~--~~~~~i~~ql~~aL~~lH~~~ivHrDL  335 (507)
T PLN03224        258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDI--NVIKGVMRQVLTGLRKLHRIGIVHRDI  335 (507)
T ss_pred             CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCH--HHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            456999999999999999875322110000000          00000111  122345667888999999999999999


Q ss_pred             CCCceEEccCCcEEEEeccccccc
Q 013944          339 HPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       339 hpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ||+||+++.++.++|+|||++..+
T Consensus       336 Kp~NILl~~~~~~kL~DFGla~~~  359 (507)
T PLN03224        336 KPENLLVTVDGQVKIIDFGAAVDM  359 (507)
T ss_pred             chHhEEECCCCcEEEEeCcCcccc
Confidence            999999999999999999998654

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.51  E-value=4.5e-14  Score=138.36  Aligned_cols=156  Identities=21%  Similarity=0.256  Sum_probs=96.5

Q ss_pred             hCCChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHH
Q 013944          149 LGSPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADE  227 (433)
Q Consensus       149 lg~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e  227 (433)
                      ++.+++++|..  .+.+|.|++|.||+|+. .+|+.|++|+......... .....                        
T Consensus        15 ~~~~~~~~~~~--~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~-~~~~~------------------------   67 (313)
T cd06633          15 YKDDPEEIFVG--LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN-EKWQD------------------------   67 (313)
T ss_pred             ccCCHHHHhhc--ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCch-HHHHH------------------------
Confidence            34566776543  45699999999999985 5789999998754321110 00000                        


Q ss_pred             HHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhh
Q 013944          228 LGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKL  307 (433)
Q Consensus       228 ~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~  307 (433)
                                +..|...+.+    +.+..-+.+..++. .....+++|||+.| ++.+++......       .++.   
T Consensus        68 ----------~~~E~~~l~~----l~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~-------l~~~---  121 (313)
T cd06633          68 ----------IIKEVKFLQQ----LKHPNTIEYKGCYL-KEHTAWLVMEYCLG-SASDLLEVHKKP-------LQEV---  121 (313)
T ss_pred             ----------HHHHHHHHHh----CCCCCCccEEEEEE-eCCEEEEEEecCCC-CHHHHHHhcCCC-------CCHH---
Confidence                      1112222222    22111122222221 23456899999975 566665432110       1111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                         . . ..+..++..++.+||..|++|+|++|+||+++.++.++++|||++...
T Consensus       122 ---~-~-~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~  171 (313)
T cd06633         122 ---E-I-AAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKS  171 (313)
T ss_pred             ---H-H-HHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence               1 1 124556788999999999999999999999999999999999987654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.51  E-value=5.1e-15  Score=154.56  Aligned_cols=84  Identities=14%  Similarity=0.101  Sum_probs=59.1

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...+++||++.+ .+.+++.... ..      +...  .. .... ..+..++..+|.|||+.|++|+|+||+|||++.+
T Consensus       236 ~~~~lv~e~~~~-~l~~~l~~~~-~~------~~~~--~~-~~~~-~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~  303 (501)
T PHA03210        236 ANTYMITQKYDF-DLYSFMYDEA-FD------WKDR--PL-LKQT-RAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD  303 (501)
T ss_pred             CeeEEEEecccc-CHHHHHhhcc-cc------cccc--cc-HHHH-HHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence            456899999864 5555543211 00      0000  00 0111 2356678899999999999999999999999999


Q ss_pred             CcEEEEecccccccCH
Q 013944          349 GQIGFLDFGLLCRMER  364 (433)
Q Consensus       349 g~l~l~DFGl~~~l~~  364 (433)
                      |.++|+|||++..+..
T Consensus       304 ~~vkL~DFGla~~~~~  319 (501)
T PHA03210        304 GKIVLGDFGTAMPFEK  319 (501)
T ss_pred             CCEEEEeCCCceecCc
Confidence            9999999999987653

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.51  E-value=1.6e-13  Score=131.49  Aligned_cols=145  Identities=16%  Similarity=0.205  Sum_probs=90.5

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|+||+|+. .+|+.||+|+.+........  ...                                   ..
T Consensus         4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~--~~~-----------------------------------~~   46 (282)
T cd07831           4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ--VNN-----------------------------------LR   46 (282)
T ss_pred             EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchh--hhH-----------------------------------HH
Confidence            35799999999999995 57899999987643221100  000                                   01


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |...+.++   ..+.+-+.+...+..- .+..++||||++| ++.+.+....+.       +++.       .+ ..+..
T Consensus        47 e~~~l~~l---~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~-------~~~~-------~~-~~~~~  107 (282)
T cd07831          47 EIQALRRL---SPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRP-------LPEK-------RV-KSYMY  107 (282)
T ss_pred             HHHHHhhc---CCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCC-------CCHH-------HH-HHHHH
Confidence            11111111   1111112222222221 1567999999986 666665432110       1111       11 23456


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++..+|.++|..|++|+|++|.||+++. |.++|+|||++..+.
T Consensus       108 qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~  150 (282)
T cd07831         108 QLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIY  150 (282)
T ss_pred             HHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccc
Confidence            7888999999999999999999999999 999999999987653

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.51  E-value=2.8e-14  Score=138.77  Aligned_cols=151  Identities=19%  Similarity=0.245  Sum_probs=94.2

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+......     .....++.+++       .+                  
T Consensus        10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~-------~l------------------   64 (311)
T cd07866          10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILK-------KL------------------   64 (311)
T ss_pred             EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHH-------hc------------------
Confidence            33456899999999999996 4789999998754321     11222222222       11                  


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                              .+.|+.++.+.+.......     .......++||||+++ ++.+.+.....       ..++.        
T Consensus        65 --------~h~~i~~~~~~~~~~~~~~-----~~~~~~~~lv~~~~~~-~l~~~~~~~~~-------~~~~~--------  115 (311)
T cd07866          65 --------KHPNVVPLIDMAVERPDKS-----KRKRGSVYMVTPYMDH-DLSGLLENPSV-------KLTES--------  115 (311)
T ss_pred             --------CCCCccchhhheecccccc-----cccCceEEEEEecCCc-CHHHHHhcccc-------CCCHH--------
Confidence                    2234444433322111000     0112235899999986 45444432110       01111        


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ....+..++..++.++|..|++|+|++|+||++++++.++++|||++....
T Consensus       116 ~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  166 (311)
T cd07866         116 QIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD  166 (311)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence            112355678889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.51  E-value=1.4e-13  Score=127.74  Aligned_cols=139  Identities=24%  Similarity=0.372  Sum_probs=92.6

Q ss_pred             ccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHH
Q 013944          169 SFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASE  247 (433)
Q Consensus       169 S~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~  247 (433)
                      ++|+||+|+.. +|+.||+|+.+.......   ...++.++..+..+                          ++.|+..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~~e~~~~~~l--------------------------~~~~i~~   51 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK---RERILREISILKKL--------------------------KHPNIVR   51 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH---HHHHHHHHHHHHhC--------------------------CCCcHHH
Confidence            58999999975 689999999876543211   11111111111111                          2234444


Q ss_pred             HHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 013944          248 FQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQ  327 (433)
Q Consensus       248 ~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~  327 (433)
                      +.+.+..             ....+++|||+++++|.+++......+        ...       . ..+..++..++.+
T Consensus        52 ~~~~~~~-------------~~~~~l~~e~~~~~~L~~~~~~~~~~~--------~~~-------~-~~~~~~l~~~l~~  102 (244)
T smart00220       52 LYDVFED-------------EDKLYLVMEYCDGGDLFDLLKKRGRLS--------EDE-------A-RFYARQILSALEY  102 (244)
T ss_pred             HHhheee-------------CCEEEEEEeCCCCCCHHHHHHhccCCC--------HHH-------H-HHHHHHHHHHHHH
Confidence            4433321             145699999999999999876432211        111       1 1244556778999


Q ss_pred             HHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          328 LLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       328 lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +|..|++|+|++|+||+++.++.++++|||.+..+...
T Consensus       103 lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~  140 (244)
T smart00220      103 LHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPG  140 (244)
T ss_pred             HHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccc
Confidence            99999999999999999999999999999999877653

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.51  E-value=5.7e-14  Score=138.70  Aligned_cols=145  Identities=18%  Similarity=0.228  Sum_probs=93.8

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchh-hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH-VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~-~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...++||.|++|.||+|+. .+|+.||||........ ....+                                     
T Consensus        13 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~-------------------------------------   55 (328)
T cd07856          13 VDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKR-------------------------------------   55 (328)
T ss_pred             EEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHH-------------------------------------
Confidence            3457899999999999985 58999999976532211 00000                                     


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +..|...+.+    +.+..-+.+...+.......+++|||+. ++|.+++.... .        ++        .....+
T Consensus        56 ~~~E~~~l~~----l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~--------~~--------~~~~~~  113 (328)
T cd07856          56 TYRELKLLKH----LRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTSRP-L--------EK--------QFIQYF  113 (328)
T ss_pred             HHHHHHHHHh----cCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhcCC-C--------CH--------HHHHHH
Confidence            0112221111    2222223333333222345789999984 57777664211 1        11        111235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++..++.+||+.|++|+|++|+||+++.++.++++|||.+....
T Consensus       114 ~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~  159 (328)
T cd07856         114 LYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQD  159 (328)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccC
Confidence            5678889999999999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.50  E-value=2.5e-14  Score=137.95  Aligned_cols=147  Identities=21%  Similarity=0.240  Sum_probs=89.3

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+++. .+|+.||||..+......   +..                                  ++..
T Consensus         9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---~~~----------------------------------~~~~   51 (288)
T cd06616           9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEK---EQK----------------------------------RLLM   51 (288)
T ss_pred             HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChH---HHH----------------------------------HHHH
Confidence            45799999999999995 578999999876432211   000                                  0111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.++    .+++  .+++++..  .....+++|||+++ ++.++........   ...+++.        ....+.
T Consensus        52 e~~~l~~~----~~~~--~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~---~~~l~~~--------~~~~i~  113 (288)
T cd06616          52 DLDVVMRS----SDCP--YIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVL---KSVIPEE--------ILGKIA  113 (288)
T ss_pred             HHHHHHHh----cCCC--CEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhh---cCCCCHH--------HHHHHH
Confidence            22222221    1111  23333322  23566899999874 5544332100000   0001111        112345


Q ss_pred             HHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.++|. .|++|+|++|.||+++.++.++++|||++..+.
T Consensus       114 ~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616         114 VATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             HHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            567889999997 499999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.50  E-value=1.2e-13  Score=127.25  Aligned_cols=144  Identities=24%  Similarity=0.346  Sum_probs=97.3

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .++||+|++|+||+|... +++.+++|+.+.....   .....+                                  ..
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~----------------------------------~~   46 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE---KQREEF----------------------------------LR   46 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch---HHHHHH----------------------------------HH
Confidence            468999999999999975 5899999998765332   011111                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccC-CCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTG-SSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      |...+.++    . .+  .+++++.  ......++++||++|++|.+++..... .+        +..        ...+
T Consensus        47 e~~~~~~~----~-~~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~--------~~~--------~~~~  103 (225)
T smart00221       47 EIRILKKL----K-HP--NIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLS--------EEE--------ARFY  103 (225)
T ss_pred             HHHHHHhC----C-CC--ChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCC--------HHH--------HHHH
Confidence            22222222    1 11  1222222  223567999999999999998865322 11        111        1123


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..++.++|..|++|+|++|.|++++.++.++++|||.+..+...
T Consensus       104 ~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221      104 LRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            445677899999999999999999999999999999999998877554

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.50  E-value=9.6e-14  Score=131.68  Aligned_cols=150  Identities=16%  Similarity=0.103  Sum_probs=92.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHH-HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVV-RDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~-~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      -.+.||+|++|.||+++. ..+..+++|+.+........ .+..-...+..++..                         
T Consensus         4 i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-------------------------   58 (260)
T cd08222           4 LQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSK-------------------------   58 (260)
T ss_pred             eeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHh-------------------------
Confidence            356899999999999985 35666777776532211000 000000001111111                         


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                       ..+.|+.++.+.+.+.             +..+++|||++|++|.+++.......    ...++.        ....+.
T Consensus        59 -l~h~~i~~~~~~~~~~-------------~~~~lv~e~~~~~~l~~~~~~~~~~~----~~~~~~--------~~~~~~  112 (260)
T cd08222          59 -LDHPAIVKFHASFLER-------------DAFCIITEYCEGRDLDCKLEELKHTG----KTLSEN--------QVCEWF  112 (260)
T ss_pred             -CCCCcHHHHHHHHhcC-------------CceEEEEEeCCCCCHHHHHHHHhhcc----cccCHH--------HHHHHH
Confidence             1244666665554332             33489999999999998875321100    001111        112245


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .++..++.++|+.|++|+|++|.||+++ ++.++++|||.+..+
T Consensus       113 ~~l~~~l~~lH~~~i~h~~l~~~nili~-~~~~~l~d~g~~~~~  155 (260)
T cd08222         113 IQLLLGVHYMHQRRILHRDLKAKNIFLK-NNLLKIGDFGVSRLL  155 (260)
T ss_pred             HHHHHHHHHHHHcCccccCCChhheEee-cCCEeecccCceeec
Confidence            6678899999999999999999999996 477999999987654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.50  E-value=3.9e-13  Score=119.31  Aligned_cols=132  Identities=17%  Similarity=0.190  Sum_probs=95.0

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      -+|++.|..++||+++. +|+.|++|+..++...                                       ..++..|
T Consensus         3 ~~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~~---------------------------------------~~~~~~E   42 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTEL---------------------------------------LINRENE   42 (170)
T ss_pred             eeecCCcccCceEEEEE-CCeEEEEEeCCCCccc---------------------------------------ccCHHHH
Confidence            36899999999999986 5889999998765321                                       0122445


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      +.++..+.+.      ..+|+++....+..++||||++|.++.+...             .   .        .....++
T Consensus        43 ~~~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~-------------~---~--------~~~~~~l   92 (170)
T cd05151          43 AENSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTEDF-------------S---D--------PENLEKI   92 (170)
T ss_pred             HHHHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCccccccc-------------c---C--------HHHHHHH
Confidence            5566555432      2368888777667899999999988764310             0   0        0112335


Q ss_pred             HHHHHHHHHCCc-----cccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          322 EATLVQLLETGI-----LHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       322 ~~~l~~lh~~gi-----vH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ...+..||..++     +|+|+||+||+++ +++++++|||.+..-++
T Consensus        93 ~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~  139 (170)
T cd05151          93 AKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDP  139 (170)
T ss_pred             HHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCCh
Confidence            567888998875     9999999999998 78899999999886554

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.49  E-value=4.9e-15  Score=134.62  Aligned_cols=145  Identities=20%  Similarity=0.206  Sum_probs=97.3

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      +.||+|.|+.|+++.. .+|+..|+|++.-..-.  .+|.+-+.+++++...+                          .
T Consensus        17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~~~~e~l~rEarIC~~L--------------------------q   68 (355)
T KOG0033|consen   17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKL--------------------------Q   68 (355)
T ss_pred             HHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--cccHHHHHHHHHHHHhc--------------------------C
Confidence            4699999999999974 58999999976432211  12333333333333322                          2


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      +.|+.++.+.+...             +-.+||.|+++|+.|-.-+-.                +.-..+....-+.+|+
T Consensus        69 HP~IvrL~~ti~~~-------------~~~ylvFe~m~G~dl~~eIV~----------------R~~ySEa~aSH~~rQi  119 (355)
T KOG0033|consen   69 HPNIVRLHDSIQEE-------------SFHYLVFDLVTGGELFEDIVA----------------REFYSEADASHCIQQI  119 (355)
T ss_pred             CCcEeehhhhhccc-------------ceeEEEEecccchHHHHHHHH----------------HHHHHHHHHHHHHHHH
Confidence            33444443333222             345999999999988643321                1122233344567888


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccC---CcEEEEecccccccCH
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRMER  364 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~---g~l~l~DFGl~~~l~~  364 (433)
                      ..++.|+|.+||+|||+||.|+++.+.   .-+||+|||++..++.
T Consensus       120 Leal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~  165 (355)
T KOG0033|consen  120 LEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND  165 (355)
T ss_pred             HHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence            999999999999999999999999643   3599999999999883

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.49  E-value=2e-14  Score=146.82  Aligned_cols=145  Identities=23%  Similarity=0.290  Sum_probs=103.9

Q ss_pred             ccccccccceeEEEEec--CC--CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          163 EPVAAASFGQVYRGSTL--DG--SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~--~G--~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +.||+||||.|++|.|.  +|  ..||||.++++....+..                                     ||
T Consensus       116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~md-------------------------------------df  158 (1039)
T KOG0199|consen  116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMD-------------------------------------DF  158 (1039)
T ss_pred             HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHH-------------------------------------HH
Confidence            46999999999999973  45  468999999876554222                                     34


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +.|+..+.++.       +-++-+.|.. +.....||||.+++|+|.+.++.....             .-.-..+ ..+
T Consensus       159 lrEas~M~~L~-------H~hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~-------------~llv~~L-cdy  217 (1039)
T KOG0199|consen  159 LREASHMLKLQ-------HPHLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKA-------------ILLVSRL-CDY  217 (1039)
T ss_pred             HHHHHHHHhcc-------CcceeEEeeeeccchhhHHhhhcccchHHHHHhhcccc-------------ceeHHHH-HHH
Confidence            55666554432       1122233322 235568999999999999988752110             0011122 335


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +.+|+.++.||-.+++||||+-..|+++-....|||+|||+++.+...
T Consensus       218 a~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n  265 (1039)
T KOG0199|consen  218 AMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN  265 (1039)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence            678899999999999999999999999998889999999999988653

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.48  E-value=7.6e-14  Score=136.57  Aligned_cols=151  Identities=17%  Similarity=0.177  Sum_probs=103.0

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      -..||.|+||.||-++. .+|+-+|.|.+...          -++          ++               ..|.--.+
T Consensus       190 ~RvlGkGGFGEV~acqvraTGKMYAcKkL~KK----------RiK----------kr---------------~ge~maLn  234 (591)
T KOG0986|consen  190 YRVLGKGGFGEVCACQVRATGKMYACKKLDKK----------RIK----------KR---------------KGETMALN  234 (591)
T ss_pred             eEEEecccccceeEEEEecchhhHHHHHHHHH----------HHH----------Hh---------------hhhHHhhH
Confidence            34699999999999985 58999998854210          010          00               00111134


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeec-ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFR-YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |...+.+...      .+.|--.|. +.....+|||..|.||+|.=.+....+.      .+++..        ..+.+.
T Consensus       235 Ek~iL~kV~s------~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~------gF~e~r--------a~FYAA  294 (591)
T KOG0986|consen  235 EKQILEKVSS------PFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNP------GFDEQR--------ARFYAA  294 (591)
T ss_pred             HHHHHHHhcc------CcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCC------CCchHH--------HHHHHH
Confidence            5555544421      233333343 2336779999999999998766544311      122211        235677


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ  367 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~  367 (433)
                      .|+++|.+||+.+|+.||+||.|||++++|.+.|+|.|++..+++...
T Consensus       295 Ei~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~  342 (591)
T KOG0986|consen  295 EIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP  342 (591)
T ss_pred             HHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCc
Confidence            789999999999999999999999999999999999999999987544

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.47  E-value=1.3e-13  Score=134.84  Aligned_cols=157  Identities=22%  Similarity=0.282  Sum_probs=95.4

Q ss_pred             CCChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 013944          150 GSPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADEL  228 (433)
Q Consensus       150 g~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~  228 (433)
                      .......|+  ..+.||.|++|+||+|+. .+|+.||||..+........ ...                          
T Consensus        10 ~~~~~~~~~--~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~-~~~--------------------------   60 (308)
T cd06634          10 KDDPEKLFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQ--------------------------   60 (308)
T ss_pred             cCCcHHHHH--HHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChH-HHH--------------------------
Confidence            344445444  346799999999999996 47899999987532111000 000                          


Q ss_pred             HHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhH
Q 013944          229 GKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLD  308 (433)
Q Consensus       229 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~  308 (433)
                              ++..|...+..    +.+..-+.+...+ ......++||||+.| ++.+.+......       +.+.    
T Consensus        61 --------~~~~e~~~l~~----l~h~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~-------l~~~----  115 (308)
T cd06634          61 --------DIIKEVRFLQK----LRHPNTIQYRGCY-LREHTAWLVMEYCLG-SASDLLEVHKKP-------LQEV----  115 (308)
T ss_pred             --------HHHHHHHHHHh----CCCCCcccEEEEE-EcCCeeEEEEEccCC-CHHHHHHHcCCC-------CCHH----
Confidence                    01112221111    2111111111111 123566899999975 676665432110       1111    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                         .+ ..+..+++.++.++|..|++|+|++|.||+++.++.++++|||++..+..
T Consensus       116 ---~~-~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  167 (308)
T cd06634         116 ---EI-AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (308)
T ss_pred             ---HH-HHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence               11 12445678899999999999999999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PRK10345 hypothetical protein; Provisional

Probab=99.47  E-value=4.6e-13  Score=123.49  Aligned_cols=140  Identities=10%  Similarity=0.143  Sum_probs=85.6

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCc---hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNL---RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~---~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +.++||+|++|.||. .-.++.. +||+.+++-   .+.+.+|+                                    
T Consensus         6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi------------------------------------   47 (210)
T PRK10345          6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRREL------------------------------------   47 (210)
T ss_pred             CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHH------------------------------------
Confidence            567899999999996 3235555 699887642   22222222                                    


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCce------EEEeec--cCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKR------VLTMEW--MVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~------~LVmE~--i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                           +-+..+..  ....+-.|+++|..+.+..      .+||||  +++++|.+++... ..+        +.     
T Consensus        48 -----~~l~~L~~--~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~--------e~-----  106 (210)
T PRK10345         48 -----KYYAHLSR--RLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-RYE--------ED-----  106 (210)
T ss_pred             -----HHHHHhhc--cCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-ccc--------Hh-----
Confidence                 22222211  1122344666665544331      278999  5679999998642 111        11     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC----CcEEEEe-cccccccC
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS----GQIGFLD-FGLLCRME  363 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~----g~l~l~D-FGl~~~l~  363 (433)
                          ...+...+..++.|||+++|+|+|+||+||+++..    ++++|+| ||....++
T Consensus       107 ----~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ip  161 (210)
T PRK10345        107 ----VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTFIP  161 (210)
T ss_pred             ----HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcceee
Confidence                01223334445699999999999999999999743    4899999 55544433

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=1.4e-14  Score=143.28  Aligned_cols=95  Identities=16%  Similarity=0.195  Sum_probs=77.9

Q ss_pred             HHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEA  323 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~  323 (433)
                      -+.+++..|++...+             |+.||-|-||.|...+..+...+-                ....++..++..
T Consensus       481 fIvrLYrTfrd~kyv-------------YmLmEaClGGElWTiLrdRg~Fdd----------------~tarF~~acv~E  531 (732)
T KOG0614|consen  481 FIVRLYRTFRDSKYV-------------YMLMEACLGGELWTILRDRGSFDD----------------YTARFYVACVLE  531 (732)
T ss_pred             HHHHHHHHhccchhh-------------hhhHHhhcCchhhhhhhhcCCccc----------------chhhhhHHHHHH
Confidence            567788888887776             899999999999998876554331                112456666788


Q ss_pred             HHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH
Q 013944          324 TLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ  367 (433)
Q Consensus       324 ~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~  367 (433)
                      ++.|||++||+.|||||.|++++.+|-+||.|||+++.+....+
T Consensus       532 AfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K  575 (732)
T KOG0614|consen  532 AFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK  575 (732)
T ss_pred             HHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence            99999999999999999999999999999999999998865443

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.46  E-value=1.9e-13  Score=126.07  Aligned_cols=158  Identities=18%  Similarity=0.240  Sum_probs=103.3

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.+|.|..+.|.++.. ++|.+.|+|++.-...........                        ++.+...+|+ 
T Consensus        19 y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~------------------------~~~EaT~~Ev-   73 (411)
T KOG0599|consen   19 YEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPY------------------------EMREATRQEI-   73 (411)
T ss_pred             cChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHH------------------------HHHHHHHHHH-
Confidence            33456799999999998885 588999999875322211100011                        1111111111 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCe-EeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFI-HVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                              .-+++ ..+++++ .+-.+| +..+-.++|.|.|+.|.|.|++...-.+        +++..        .-
T Consensus        74 --------~ILRq-v~GHP~II~l~D~y-es~sF~FlVFdl~prGELFDyLts~Vtl--------SEK~t--------R~  127 (411)
T KOG0599|consen   74 --------SILRQ-VMGHPYIIDLQDVY-ESDAFVFLVFDLMPRGELFDYLTSKVTL--------SEKET--------RR  127 (411)
T ss_pred             --------HHHHH-hcCCCcEEEeeeec-cCcchhhhhhhhcccchHHHHhhhheee--------cHHHH--------HH
Confidence                    11222 2333333 222222 2334558999999999999999754222        22221        23


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ  367 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~  367 (433)
                      +++++..++.|+|..+|+|||+||.|||++++.+++|+|||++.++.+..+
T Consensus       128 iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Gek  178 (411)
T KOG0599|consen  128 IMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEK  178 (411)
T ss_pred             HHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchh
Confidence            567777899999999999999999999999999999999999999987654

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.45  E-value=1.3e-14  Score=136.42  Aligned_cols=195  Identities=18%  Similarity=0.250  Sum_probs=126.8

Q ss_pred             ccccCCccccccccceeEEEEe-cCCCEEEEEE-cCCCc----hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 013944          157 FSFISEEPVAAASFGQVYRGST-LDGSIVAVKV-QRPNL----RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGK  230 (433)
Q Consensus       157 f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv-~~p~~----~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~  230 (433)
                      ..|....|+++|.- .|.-|-. -.+++||+|. .+|-.    .....+++.++.                         
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~-------------------------   70 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMK-------------------------   70 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhh-------------------------
Confidence            35677789998876 4555652 4789999984 44411    112223333333                         


Q ss_pred             HhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          231 GLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       231 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                              ..+++|+.++...|.       |.--.+--...++|||+++ .+|..++...                  ..
T Consensus        71 --------~v~~~nii~l~n~ft-------P~~~l~~~~e~y~v~e~m~-~nl~~vi~~e------------------lD  116 (369)
T KOG0665|consen   71 --------CVNHKNIISLLNVFT-------PQKTLEEFQEVYLVMELMD-ANLCQVILME------------------LD  116 (369)
T ss_pred             --------hhcccceeeeeeccC-------ccccHHHHHhHHHHHHhhh-hHHHHHHHHh------------------cc
Confidence                    224445544433332       1111111234589999998 4666655422                  11


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLT  390 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~  390 (433)
                      -..+..+..+++++++++|+.||+||||||.||++..++.+|++|||+++.-....+.  .    -.+-..++.+.+.+.
T Consensus       117 H~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~m--t----pyVvtRyyrapevil  190 (369)
T KOG0665|consen  117 HETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMM--T----PYVVTRYYRAPEVIL  190 (369)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCccccc--C----chhheeeccCchhee
Confidence            1223456678899999999999999999999999999999999999999877665221  1    123346788899999


Q ss_pred             hcCCCCCCCChHHHHHHHHHHh-hchhcc
Q 013944          391 EMDVVRPGTNTLRVTMDLEDAL-GEVEFK  418 (433)
Q Consensus       391 ~~g~~~~~~d~~~~~~~l~~~l-~~~~~~  418 (433)
                      +|| ..+.+|+|+++-.+.+++ +..+|.
T Consensus       191 ~~~-~ke~vdiwSvGci~gEli~~~Vlf~  218 (369)
T KOG0665|consen  191 GMG-YKENVDIWSVGCIMGELILGTVLFP  218 (369)
T ss_pred             ccC-CcccchhhhhhhHHHHHhhceEEec
Confidence            999 789999997766665554 444553

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.45  E-value=8.2e-14  Score=138.21  Aligned_cols=176  Identities=19%  Similarity=0.194  Sum_probs=115.3

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCc--hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNL--RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~--~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .-.|+|-|+.|.+|.. ..|+.||||+++.+-  ...-..++.+|+       ++....                    .
T Consensus       438 ~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLk-------KL~~AD--------------------~  490 (752)
T KOG0670|consen  438 GYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILK-------KLNDAD--------------------P  490 (752)
T ss_pred             eccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHH-------HhhccC--------------------c
Confidence            3579999999999994 578899999998652  222234455554       332110                    1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ..-.++.++...|.+.+++             |||.|-+. ..|.+++..-+..           -++.+.  -...++.
T Consensus       491 Edk~Hclrl~r~F~hknHL-------------ClVFE~Ls-lNLRevLKKyG~n-----------vGL~ik--aVRsYaq  543 (752)
T KOG0670|consen  491 EDKFHCLRLFRHFKHKNHL-------------CLVFEPLS-LNLREVLKKYGRN-----------VGLHIK--AVRSYAQ  543 (752)
T ss_pred             hhhhHHHHHHHHhhhccee-------------EEEehhhh-chHHHHHHHhCcc-----------cceeeh--HHHHHHH
Confidence            1223667777777766666             99999775 6788877643211           111111  1235677


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccC-CcEEEEecccccccCHHHHHHHHH-HHH-------H---HHhcCHHHHHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKHQFAMLA-SIV-------H---IVNGDWQSLVH  387 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l~~~~~~~~~~-~~~-------~---~~~~d~~~~~~  387 (433)
                      |+..+|..|-.+||+|+|+||.||||+.. ..++|||||.+....+..-.-++- -+.       +   -.--|.|+++.
T Consensus       544 QLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgc  623 (752)
T KOG0670|consen  544 QLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGC  623 (752)
T ss_pred             HHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeece
Confidence            78889999999999999999999999865 579999999999887654322221 111       1   11236667777


Q ss_pred             HHHhc
Q 013944          388 SLTEM  392 (433)
Q Consensus       388 ~l~~~  392 (433)
                      .||++
T Consensus       624 tLYEl  628 (752)
T KOG0670|consen  624 TLYEL  628 (752)
T ss_pred             eeEEe
Confidence            77765

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=2.9e-13  Score=135.42  Aligned_cols=148  Identities=18%  Similarity=0.240  Sum_probs=100.3

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|+-+.||++.-.+.+-+|+|...-..     .|-+.+.                               -|++
T Consensus       365 ilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~-----~D~qtl~-------------------------------gy~n  408 (677)
T KOG0596|consen  365 ILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE-----ADNQTLD-------------------------------GYRN  408 (677)
T ss_pred             HHHhhcCCCcceeeeeecCCCcchhhhHHHHhh-----cCHHHHH-------------------------------HHHH
Confidence            346799999999999986666777777432111     1111111                               1344


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |-.-+.++.+    .  ..|.++|..  ..+..||||||= ..+|..++....+..+            .+   .+..+.
T Consensus       409 EI~lL~KLkg----~--~~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~~~------------~~---~lk~yw  466 (677)
T KOG0596|consen  409 EIALLNKLKG----H--DKIIQLYDYEVTDGYLYMVMECG-DIDLNKILKKKKSIDP------------DW---FLKFYW  466 (677)
T ss_pred             HHHHHHHhcC----C--ceEEEEeeeeccCceEEEEeecc-cccHHHHHHhccCCCc------------hH---HHHHHH
Confidence            4444444432    2  344455543  236679999954 4899999986654321            11   234567


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ  367 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~  367 (433)
                      .++..+++.+|.+||||.||||.|+|+ -+|.+||+|||++..+.+++.
T Consensus       467 kqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTT  514 (677)
T KOG0596|consen  467 KQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTT  514 (677)
T ss_pred             HHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCcccc
Confidence            788889999999999999999999998 569999999999998876654

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.43  E-value=1.7e-13  Score=126.54  Aligned_cols=170  Identities=24%  Similarity=0.331  Sum_probs=105.4

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCC-chh---hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPN-LRH---VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~-~~~---~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .-+|+|+-|+|++++. .+|...|||.++.. ..+   .|..|+.++                                 
T Consensus        98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv---------------------------------  144 (391)
T KOG0983|consen   98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVV---------------------------------  144 (391)
T ss_pred             HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHH---------------------------------
Confidence            3599999999999995 58999999987753 222   122222211                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                                    +..+..-++.+.+..+  .+..+++||.+. ..+..++....+.               ..++++.
T Consensus       145 --------------~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik~p---------------iPE~ilG  194 (391)
T KOG0983|consen  145 --------------LKSHDCPYIVQCFGYFITNTDVFICMELMS-TCAEKLLKRIKGP---------------IPERILG  194 (391)
T ss_pred             --------------hhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhcCC---------------chHHhhh
Confidence                          1122223334444332  245578888764 3444444432221               1123333


Q ss_pred             HHHHHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCHHHHH---HHHHHH------------HHHHh
Q 013944          316 LVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF---AMLASI------------VHIVN  379 (433)
Q Consensus       316 l~~~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~---~~~~~~------------~~~~~  379 (433)
                      -+...+..+|.||-+ +|++|||+||.|||++..|.+|++|||+++++.+....   +-...+            .+-+.
T Consensus       195 k~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiR  274 (391)
T KOG0983|consen  195 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIR  274 (391)
T ss_pred             hhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchh
Confidence            344456678888864 79999999999999999999999999999998654321   111111            11345


Q ss_pred             cCHHHHHHHHHhcCCC
Q 013944          380 GDWQSLVHSLTEMDVV  395 (433)
Q Consensus       380 ~d~~~~~~~l~~~g~~  395 (433)
                      .|+|+++-.++++...
T Consensus       275 aDVWSlGITlveLaTg  290 (391)
T KOG0983|consen  275 ADVWSLGITLVELATG  290 (391)
T ss_pred             hhhhhhccchhhhhcc
Confidence            6788888888776543

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.43  E-value=3.7e-14  Score=132.33  Aligned_cols=188  Identities=18%  Similarity=0.162  Sum_probs=118.7

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +..+.||.|--|.|-.+.. .+|+..|+|+++-.-...  ++                                      
T Consensus        65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KAR--rE--------------------------------------  104 (400)
T KOG0604|consen   65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKAR--RE--------------------------------------  104 (400)
T ss_pred             ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHH--hH--------------------------------------
Confidence            4557899999999999985 589999999986432221  11                                      


Q ss_pred             HHHHHHHHHHHHhcCCCC-CeEeceeecc-cC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFP-FIHVPKVFRY-LS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~-~v~vP~v~~~-~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                             +++.=..+.++ -|.|-.||.. +.  .-..+|||.++||.|.+.+...+..      .+.|++.        
T Consensus       105 -------VeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~------afTErea--------  163 (400)
T KOG0604|consen  105 -------VELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQ------AFTEREA--------  163 (400)
T ss_pred             -------hhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccc------cchHHHH--------
Confidence                   11111111222 2334444433 11  2237899999999999888755321      2333332        


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEcc---CCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHh
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE  391 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~---~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~  391 (433)
                      .-+.++|+.++.|||+.+|-|||+||+|+|.+.   |..+||+|||+++.-....   .+.+    ..-..+.++.....
T Consensus       164 ~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~---~L~T----Pc~TPyYvaPevlg  236 (400)
T KOG0604|consen  164 SEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG---DLMT----PCFTPYYVAPEVLG  236 (400)
T ss_pred             HHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCc---cccC----CcccccccCHHHhC
Confidence            236778899999999999999999999999974   4579999999998765321   1110    01112233333332


Q ss_pred             cCCCCCCCChHHHHHHHHHHhhch
Q 013944          392 MDVVRPGTNTLRVTMDLEDALGEV  415 (433)
Q Consensus       392 ~g~~~~~~d~~~~~~~l~~~l~~~  415 (433)
                      ---.....|.|+++-.++-+|+.+
T Consensus       237 ~eKydkscdmwSlgVimYIlLCGy  260 (400)
T KOG0604|consen  237 PEKYDKSCDMWSLGVIMYILLCGY  260 (400)
T ss_pred             chhcCCCCCccchhHHHHHhhcCC
Confidence            223455678888888887777544

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.43  E-value=1.5e-13  Score=138.97  Aligned_cols=142  Identities=20%  Similarity=0.267  Sum_probs=101.9

Q ss_pred             ccccccccceeEEEEec---CC--CEEEEEEcCCCc----hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          163 EPVAAASFGQVYRGSTL---DG--SIVAVKVQRPNL----RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~---~G--~~VAVKv~~p~~----~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      +.||.|-||.||+|+..   .|  --||||+.+.+.    .+.+..+..+|+.                           
T Consensus       395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrn---------------------------  447 (974)
T KOG4257|consen  395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRN---------------------------  447 (974)
T ss_pred             HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHh---------------------------
Confidence            46999999999999952   34  358999887543    2333333333331                           


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                            -.|.|+.++.+.+..              .+.++|||.++-|.|..++...+.             .+.  -..
T Consensus       448 ------fdHphIikLIGv~~e--------------~P~WivmEL~~~GELr~yLq~nk~-------------sL~--l~t  492 (974)
T KOG4257|consen  448 ------FDHPHIIKLIGVCVE--------------QPMWIVMELAPLGELREYLQQNKD-------------SLP--LRT  492 (974)
T ss_pred             ------CCCcchhheeeeeec--------------cceeEEEecccchhHHHHHHhccc-------------cch--HHH
Confidence                  123344444333322              345899999999999999875431             111  223


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~  366 (433)
                      +-+...+++.+|.|||+..|+|||+-..||||.+...+||.|||+++.++++.
T Consensus       493 L~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~  545 (974)
T KOG4257|consen  493 LTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDA  545 (974)
T ss_pred             HHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccc
Confidence            34577889999999999999999999999999999999999999999987754

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.42  E-value=6.5e-13  Score=143.74  Aligned_cols=142  Identities=23%  Similarity=0.335  Sum_probs=96.2

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+-+|.|++|+||+|+..+|+.||+|+++|...-    |+.|...+.   .++                  .     ...
T Consensus       703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W----EfYI~~q~~---~RL------------------k-----~~~  752 (974)
T KOG1166|consen  703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW----EFYICLQVM---ERL------------------K-----PQM  752 (974)
T ss_pred             EeeeccccceEEEEeecCCCcEEEEEeecCCCce----eeeehHHHH---Hhh------------------c-----hhh
Confidence            4569999999999999878999999999986543    222222111   111                  1     000


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      -..+..+...+             -+.+..+||+||.+-|+|.|++...+..+                ..+.-++..++
T Consensus       753 ~~~~~~~~~a~-------------~~~~~S~lv~ey~~~Gtlld~~N~~~~m~----------------e~lv~~~~~qm  803 (974)
T KOG1166|consen  753 LPSIMHISSAH-------------VFQNASVLVSEYSPYGTLLDLINTNKVMD----------------EYLVMFFSCQM  803 (974)
T ss_pred             hcchHHHHHHH-------------ccCCcceeeeeccccccHHHhhccCCCCC----------------chhhhHHHHHH
Confidence            00111111111             13455599999999999999987443332                12334566677


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEcc-------CCcEEEEeccccccc
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTS-------SGQIGFLDFGLLCRM  362 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~-------~g~l~l~DFGl~~~l  362 (433)
                      +.-+++||..||||+||||+|+|+..       .-.++|+|||.+-.+
T Consensus       804 l~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm  851 (974)
T KOG1166|consen  804 LRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM  851 (974)
T ss_pred             HHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence            88899999999999999999999963       246999999987654

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.42  E-value=1.4e-14  Score=150.76  Aligned_cols=201  Identities=22%  Similarity=0.221  Sum_probs=121.8

Q ss_pred             cCCccccccccc-eeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFG-QVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~g-qVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..++-+|.|+-| .||+|.. +|++||||..-++..+-..+|+.+++.                                
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~~~~A~rEi~lL~e--------------------------------  558 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEFFDFAQREIQLLQE--------------------------------  558 (903)
T ss_pred             ccHHHcccCCCCcEEEEEee-CCceehHHHHhhHhHHHHHHHHHHHHh--------------------------------
Confidence            455678899887 5699986 899999997765555544555544441                                


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ..+|.|++|+...-++.             .-.|++.|.|. .+|.|++... +.+.+..      ..++..     .+.
T Consensus       559 SD~H~NviRyyc~E~d~-------------qF~YIalELC~-~sL~dlie~~-~~d~~~~------~~i~~~-----~~l  612 (903)
T KOG1027|consen  559 SDEHPNVIRYYCSEQDR-------------QFLYIALELCA-CSLQDLIESS-GLDVEMQ------SDIDPI-----SVL  612 (903)
T ss_pred             ccCCCceEEEEeeccCC-------------ceEEEEehHhh-hhHHHHHhcc-ccchhhc------ccccHH-----HHH
Confidence            11333443332111111             23489999997 7999998764 2221111      001111     244


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEcc---C--CcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTS---S--GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~---~--g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g  393 (433)
                      .++..|+.+||..+|+|||+||.||||+.   +  .+++|.|||+++.++.... .+..  .....+.....+..+....
T Consensus       613 ~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s-S~~r--~s~~sGt~GW~APE~L~~~  689 (903)
T KOG1027|consen  613 SQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS-SFSR--LSGGSGTSGWQAPEQLRED  689 (903)
T ss_pred             HHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc-hhhc--ccCCCCcccccCHHHHhcc
Confidence            56778999999999999999999999975   3  4789999999999976542 2222  1222333334444444444


Q ss_pred             CCCCCCChHHHHHHHHHHh--hchhccCCCC
Q 013944          394 VVRPGTNTLRVTMDLEDAL--GEVEFKDGIP  422 (433)
Q Consensus       394 ~~~~~~d~~~~~~~l~~~l--~~~~~~~~~~  422 (433)
                      --...+|+..++-.++-+|  |...|++.+.
T Consensus       690 ~~~~avDiFslGCvfyYvltgG~HpFGd~~~  720 (903)
T KOG1027|consen  690 RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE  720 (903)
T ss_pred             ccCcccchhhcCceEEEEecCCccCCCchHH
Confidence            4455778874433332223  4556665543

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.42  E-value=4e-14  Score=143.57  Aligned_cols=203  Identities=16%  Similarity=0.145  Sum_probs=127.4

Q ss_pred             CChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 013944          151 SPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELG  229 (433)
Q Consensus       151 ~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~  229 (433)
                      .+....|-.++ +.||+|+|-.||||.. .+|.+||---.+-.-..+-..+++-+..++.+++.+               
T Consensus        35 ~~p~gRy~k~~-evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL---------------   98 (632)
T KOG0584|consen   35 KDPTGRYLKFD-EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL---------------   98 (632)
T ss_pred             cCCCCceeehh-hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC---------------
Confidence            34444444443 4699999999999985 578887632111000000111222233333333322               


Q ss_pred             HHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          230 KGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       230 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                                 .|.|+.+|...+.+...           ....+|+|.+.+|+|..+.+..+..++              
T Consensus        99 -----------~H~NIirfy~SW~d~~n-----------~~in~iTEL~TSGtLr~Y~kk~~~vn~--------------  142 (632)
T KOG0584|consen   99 -----------KHPNIIRFYDSWVDTDN-----------KTINFITELFTSGTLREYRKKHRRVNI--------------  142 (632)
T ss_pred             -----------CCCceeeeeeheecCCC-----------ceeeeeeecccCCcHHHHHHHhccCCH--------------
Confidence                       34567666655443332           224899999999999999886654431              


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHC--CccccCCCCCceEEcc-CCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHH
Q 013944          310 KWRLLDLVNKGVEATLVQLLET--GILHADPHPGNLRYTS-SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLV  386 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~--givH~DlhpgNilv~~-~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~  386 (433)
                        +.+.--.++|..+|.|||++  .|+|||||-.||+|+. .|.|||.|.|+++.+....-..        +-|..+=||
T Consensus       143 --kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks--------vIGTPEFMA  212 (632)
T KOG0584|consen  143 --KAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS--------VIGTPEFMA  212 (632)
T ss_pred             --HHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccce--------eccCccccC
Confidence              12233456788899999986  6999999999999974 5999999999998776544322        224456677


Q ss_pred             HHHHhcCCCCCCCChHHHHHHH-HHHhhchh
Q 013944          387 HSLTEMDVVRPGTNTLRVTMDL-EDALGEVE  416 (433)
Q Consensus       387 ~~l~~~g~~~~~~d~~~~~~~l-~~~l~~~~  416 (433)
                      ..+|+-++ .+.+|+++|+.=+ +++-++++
T Consensus       213 PEmYEE~Y-nE~VDVYaFGMCmLEMvT~eYP  242 (632)
T KOG0584|consen  213 PEMYEENY-NELVDVYAFGMCMLEMVTSEYP  242 (632)
T ss_pred             hHHHhhhc-chhhhhhhhhHHHHHHHhccCC
Confidence            77777554 6677777777633 33335543

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.41  E-value=4.7e-13  Score=130.20  Aligned_cols=143  Identities=17%  Similarity=0.270  Sum_probs=101.0

Q ss_pred             ccCCccccccccceeEEEEec----CCCEEEEEEcCC-CchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          159 FISEEPVAAASFGQVYRGSTL----DGSIVAVKVQRP-NLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p-~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      +...++||+|+|+.||+|++.    .++.||+|-.++ .....+..++.+|..+.                         
T Consensus        38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~g-------------------------   92 (418)
T KOG1167|consen   38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLG-------------------------   92 (418)
T ss_pred             hhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhc-------------------------
Confidence            345678999999999999963    468899997765 33455666666655321                         


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                             =+.|+..+...++....+             ++||||.+.....++.....         +.     ...   
T Consensus        93 -------G~~ni~~~~~~~rnnd~v-------------~ivlp~~~H~~f~~l~~~l~---------~~-----~i~---  135 (418)
T KOG1167|consen   93 -------GSDNIIKLNGCFRNNDQV-------------AIVLPYFEHDRFRDLYRSLS---------LA-----EIR---  135 (418)
T ss_pred             -------cchhhhcchhhhccCCee-------------EEEecccCccCHHHHHhcCC---------HH-----HHH---
Confidence                   122555555566555555             89999999888877765321         11     111   


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc-CCcEEEEecccccccCHH
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l~~~  365 (433)
                        ...+.+..+|.++|..||+|||+||+|++.+. .++-.|+|||++...+..
T Consensus       136 --~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~  186 (418)
T KOG1167|consen  136 --WYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY  186 (418)
T ss_pred             --HHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence              22333456899999999999999999999985 488899999999865443

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.40  E-value=4.8e-13  Score=126.46  Aligned_cols=184  Identities=17%  Similarity=0.155  Sum_probs=115.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ...||.|||+.|-.+++ ++.+.+|+||.+..+-.                     ...++.+               .+
T Consensus       255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n---------------------ddedidw---------------vq  298 (593)
T KOG0695|consen  255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN---------------------DDEDIDW---------------VQ  298 (593)
T ss_pred             eeeecCcchhhhhheehcccceeeehhhHHHHhcC---------------------Ccccchh---------------HH
Confidence            46899999999999996 58899999998743211                     0111111               11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      -.++.   .+.-++++.+.--...-...++.+.|.||++|++|.-.+...+.++        ++        -.++....
T Consensus       299 tek~v---fe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklp--------ee--------harfys~e  359 (593)
T KOG0695|consen  299 TEKHV---FEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--------EE--------HARFYSAE  359 (593)
T ss_pred             hhHHH---HHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCc--------HH--------HhhhhhHH
Confidence            11111   1111222222111111122367799999999999976665443332        21        22345556


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC-H-HHH-----------HHHHHHHHHHHhcCHHHHHH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME-R-KHQ-----------FAMLASIVHIVNGDWQSLVH  387 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~-~-~~~-----------~~~~~~~~~~~~~d~~~~~~  387 (433)
                      |+.+|.+||+.||+.||+|..|+|++..|.+|+.|+||++.=- + +..           ..++..--+-..-|||+++-
T Consensus       360 i~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgv  439 (593)
T KOG0695|consen  360 ICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGV  439 (593)
T ss_pred             HHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHH
Confidence            7789999999999999999999999999999999999987531 1 111           11111111234569999999


Q ss_pred             HHHhcCCCCCCCC
Q 013944          388 SLTEMDVVRPGTN  400 (433)
Q Consensus       388 ~l~~~g~~~~~~d  400 (433)
                      .+.+|-....+.|
T Consensus       440 lmfemmagrspfd  452 (593)
T KOG0695|consen  440 LMFEMMAGRSPFD  452 (593)
T ss_pred             HHHHHHcCCCCcc
Confidence            9999866655444

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.39  E-value=8.8e-13  Score=119.20  Aligned_cols=178  Identities=22%  Similarity=0.280  Sum_probs=98.0

Q ss_pred             eeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHh--hcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHH
Q 013944          172 QVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK--RKSDLRLYADELGKGLVGELDYTLEAANASEFQ  249 (433)
Q Consensus       172 qVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~--~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~  249 (433)
                      -||.|...+|.+||||+-+.+... +..    .+....--.++..  .......+..         .-...|.+++.++.
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~-Fk~----~~~y~~~~~r~~~~~~~~~~~~~~~---------~~~~~E~~~L~~l~   66 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTS-FKR----RKKYRDYDYRFKKYRHKSSWRYLIR---------EWAKKEFRNLKRLY   66 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---S-S-H----HHHHTTTSTTSTTC--G--CHHHHH---------HHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCCEEEEEEeccCceE-EEE----eeeeecccchhcccccccCHHHHHH---------HHHHHHHHHHHHHH
Confidence            389999889999999998865321 111    0000000000000  0001111111         22366888887764


Q ss_pred             HhcCCCCCeEeceeecccCCceEEEeeccC--CCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 013944          250 ESHSPFPFIHVPKVFRYLSRKRVLTMEWMV--GESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQ  327 (433)
Q Consensus       250 ~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~--G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~  327 (433)
                           ...+.+|+++..  ++.+|||||++  |.++..+.....          ...   ...    .++...+......
T Consensus        67 -----~~Gv~vP~p~~~--~~~~ivME~I~~~G~~~~~l~~~~~----------~~~---~~~----~~~~~il~~~~~~  122 (188)
T PF01163_consen   67 -----EAGVPVPKPYDY--NRNVIVMEYIGEDGVPLPRLKDVDL----------SPE---EPK----ELLEEILEEIIKM  122 (188)
T ss_dssp             -----CTT-SS--EEEE--ETTEEEEE--EETTEEGGCHHHCGG----------GGS---THH----HHHHHHHHHHHHH
T ss_pred             -----HCCccCCcEEEE--eCCEEEEEecCCCccchhhHHhccc----------cch---hHH----HHHHHHHHHHHHH
Confidence                 345789999843  57899999999  877766543210          000   011    1222223334556


Q ss_pred             HHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCC
Q 013944          328 LLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       328 lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                      +|..|++|+||++.||+++++ ++.++|||.+..........       ++.+|...+..-+...|..
T Consensus       123 ~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~~p~a~~-------~l~RDi~ni~~fF~~~~~~  182 (188)
T PF01163_consen  123 LHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSSHPNAEE-------LLRRDIENIIRFFKKKGVQ  182 (188)
T ss_dssp             HHCTTEEESS-STTSEEEETT-CEEE--GTTEEETTSTTHHH-------HHHHHHHHHHHHHHCCC--
T ss_pred             HHhcCceecCCChhhEEeecc-eEEEEecCcceecCCccHHH-------HHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999765 99999999998887544333       3456888888888777764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.39  E-value=2.7e-13  Score=152.57  Aligned_cols=132  Identities=16%  Similarity=0.197  Sum_probs=86.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      +.+.||+|+||.||+|+. .+|..||||..+..... ...+++.++                                 .
T Consensus       694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~l~---------------------------------~  739 (968)
T PLN00113        694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-PSSEIADMG---------------------------------K  739 (968)
T ss_pred             cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-cHHHHHHHh---------------------------------h
Confidence            456799999999999996 58999999987532111 011111111                                 0


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      ..|+|+               ++++..  .....++||||++|++|.+++..   .+              +..+  ..+
T Consensus       740 l~HpnI---------------v~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---l~--------------~~~~--~~i  785 (968)
T PLN00113        740 LQHPNI---------------VKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN---LS--------------WERR--RKI  785 (968)
T ss_pred             CCCCCc---------------ceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc---CC--------------HHHH--HHH
Confidence            012222               233322  12456999999999999998852   11              1111  125


Q ss_pred             HHHHHHHHHHHH---HCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          318 NKGVEATLVQLL---ETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       318 ~~~i~~~l~~lh---~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      ..+++.++.|+|   ..+++|+|+||.||+++.++..++. ||..+.
T Consensus       786 ~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~  831 (968)
T PLN00113        786 AIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGL  831 (968)
T ss_pred             HHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccc
Confidence            667889999999   6699999999999999988776654 555443

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.39  E-value=4.2e-13  Score=144.65  Aligned_cols=77  Identities=22%  Similarity=0.295  Sum_probs=62.2

Q ss_pred             eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc
Q 013944          271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ  350 (433)
Q Consensus       271 ~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~  350 (433)
                      .|+-||||+...+.+++.......              .....+. +.++|..|+.|+|+.|++|||+||.||++++++.
T Consensus       671 LYIQMEyCE~~ll~~iI~~N~~~~--------------~~d~~wr-LFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~  735 (1351)
T KOG1035|consen  671 LYIQMEYCEKTLLRDIIRRNHFNS--------------QRDEAWR-LFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNS  735 (1351)
T ss_pred             EEEEHhhhhhhHHHHHHHhcccch--------------hhHHHHH-HHHHHHHHHHHHHhCceeeccCCcceeEEcCCCC
Confidence            489999999988888876543211              1222333 4566888999999999999999999999999999


Q ss_pred             EEEEeccccccc
Q 013944          351 IGFLDFGLLCRM  362 (433)
Q Consensus       351 l~l~DFGl~~~l  362 (433)
                      |||.|||++...
T Consensus       736 VKIGDFGLAt~~  747 (1351)
T KOG1035|consen  736 VKIGDFGLATDL  747 (1351)
T ss_pred             eeecccccchhh
Confidence            999999999873

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.38  E-value=6.8e-12  Score=113.98  Aligned_cols=170  Identities=18%  Similarity=0.193  Sum_probs=105.0

Q ss_pred             ccccccccceeEEEEecC-------CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHH--hhcCCHHHHHHHHHHHhH
Q 013944          163 EPVAAASFGQVYRGSTLD-------GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIA--KRKSDLRLYADELGKGLV  233 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~-------G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~--~~~~~~~~~~~e~~~~l~  233 (433)
                      .+||+|-=+.||.|...+       +..||||+-+..... +..--.-++.-    .++.  ..+.+...++..++    
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~-Fk~~~~y~~~~----~rf~~~~~k~~~~~~~~~wa----   73 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNE-FKNRDKYIKDD----YRFKDRFSKLNPRKIIRMWA----   73 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEecccee-EcChhhhccCC----cccccCcCCCCHHHHHHHHH----
Confidence            478999999999998532       589999998754321 11000000000    0000  01134444444444    


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcch-hhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD-LISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                           ..|.+|+.++.+.     .+.+|+++.  ..+.+|||||+.|..+.. .+...         .+.+.+       
T Consensus        74 -----~kE~r~L~rl~~~-----Gv~vP~pi~--~~~~~lvME~Ig~~~~~~~~Lkd~---------~~~~~~-------  125 (197)
T cd05146          74 -----EKEMHNLKRMQKA-----GIPCPEVVV--LKKHVLVMSFIGDDQVPAPKLKDA---------KLNDEE-------  125 (197)
T ss_pred             -----HHHHHHHHHHHHc-----CCCCCeEEE--ecCCEEEEEEcCCCCccchhhhcc---------ccCHHH-------
Confidence                 5799999998754     578999995  378899999998753321 11100         001110       


Q ss_pred             HHHHHHHHHHHHHHHH-HHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHH
Q 013944          313 LLDLVNKGVEATLVQL-LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAML  371 (433)
Q Consensus       313 l~~l~~~~i~~~l~~l-h~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~  371 (433)
                      ... +..++...+..+ |..|++|+||+|.||++. +|++.++|||.+...+......++
T Consensus       126 ~~~-i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp~a~~~l  183 (197)
T cd05146         126 MKN-AYYQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTHPHGLEFL  183 (197)
T ss_pred             HHH-HHHHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCCCCHHHHH
Confidence            111 223344566656 899999999999999996 688999999999988765444333

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.38  E-value=1e-11  Score=106.73  Aligned_cols=134  Identities=21%  Similarity=0.261  Sum_probs=94.4

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCch-hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLR-HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~-~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+++++|+++.||+++. ++..++||+.++... ..+                                         ..
T Consensus         3 ~~~i~~g~~~~v~~~~~-~~~~~~iK~~~~~~~~~~~-----------------------------------------~~   40 (155)
T cd05120           3 IKLLKGGLTNRVYLLGT-KDEDYVLKINPSREKGADR-----------------------------------------ER   40 (155)
T ss_pred             ceecccccccceEEEEe-cCCeEEEEecCCCCchhHH-----------------------------------------HH
Confidence            35799999999999997 448899999876543 111                                         23


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+..+...     ...+|+++....  +..+++|||++|..+..+ .              ....        ..+.
T Consensus        41 e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-~--------------~~~~--------~~~~   92 (155)
T cd05120          41 EVAILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEV-S--------------EEEK--------EDIA   92 (155)
T ss_pred             HHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccC-C--------------HHHH--------HHHH
Confidence            44444444332     345677765443  368999999999877643 0              0000        1133


Q ss_pred             HHHHHHHHHHHHC---CccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          319 KGVEATLVQLLET---GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       319 ~~i~~~l~~lh~~---givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..+..++.++|..   |++|+|+||+|+++++++.++++|||.+...++.
T Consensus        93 ~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~  142 (155)
T cd05120          93 EQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPPA  142 (155)
T ss_pred             HHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCChH
Confidence            4466678888874   7999999999999999899999999999876654

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.38  E-value=5.4e-12  Score=119.01  Aligned_cols=150  Identities=17%  Similarity=0.174  Sum_probs=95.1

Q ss_pred             Ccccc-ccccceeEEEEecCCCEEEEEEcC-CCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          162 EEPVA-AASFGQVYRGSTLDGSIVAVKVQR-PNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       162 ~~pig-sgS~gqVy~a~l~~G~~VAVKv~~-p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+| .|+.|.||+... +|..++||..+ +++-..+..+-...                          .....-.+.
T Consensus        36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~--------------------------~~~~~~r~~   88 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLF--------------------------TGLERTRAF   88 (239)
T ss_pred             CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccc--------------------------cchhhhHHH
Confidence            34687 899999999986 57889999764 33322211110000                          000111124


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc------CCceEEEeeccCC-CCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL------SRKRVLTMEWMVG-ESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LVmE~i~G-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      .|...+.++..     .++.+|.++...      ..+.++||||++| .+|.+++... ..+        +.        
T Consensus        89 rE~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~--------~~--------  146 (239)
T PRK01723         89 AEFRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA-PLS--------EE--------  146 (239)
T ss_pred             HHHHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC-CCC--------HH--------
Confidence            45556655542     234556665421      1123699999998 6888776421 111        10        


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                          ...++..++.++|..|++|+|+||+|||++++++++|+|||.+..-.+
T Consensus       147 ----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~~  194 (239)
T PRK01723        147 ----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGELRTP  194 (239)
T ss_pred             ----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcccCCC
Confidence                123466789999999999999999999999999999999999887653

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.38  E-value=1.3e-13  Score=140.44  Aligned_cols=142  Identities=24%  Similarity=0.325  Sum_probs=100.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHH---HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVV---RDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~---~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ....||+|++|.||||+. .+|+..|||+.+-...+.+.   .++-+++                               
T Consensus        19 llqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~-------------------------------   67 (829)
T KOG0576|consen   19 LLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLR-------------------------------   67 (829)
T ss_pred             heeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeee-------------------------------
Confidence            346799999999999995 68999999987643333221   1111111                               


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                        .-.+.|+..+.+.+-..             .+.+++||||.|++|.|.-.....++        +.+        +..
T Consensus        68 --dc~h~nivay~gsylr~-------------dklwicMEycgggslQdiy~~Tgpls--------elq--------iay  116 (829)
T KOG0576|consen   68 --DCRHPNIVAYFGSYLRR-------------DKLWICMEYCGGGSLQDIYHVTGPLS--------ELQ--------IAY  116 (829)
T ss_pred             --cCCCcChHHHHhhhhhh-------------cCcEEEEEecCCCcccceeeecccch--------hHH--------HHH
Confidence              11233554444333221             23499999999999999876544332        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +.+....++.|+|..|-+|||+|-+||+++..|.+++.|||.+.++..
T Consensus       117 vcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita  164 (829)
T KOG0576|consen  117 VCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA  164 (829)
T ss_pred             HHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh
Confidence            555566799999999999999999999999999999999999988754

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.37  E-value=4.9e-12  Score=115.48  Aligned_cols=155  Identities=19%  Similarity=0.119  Sum_probs=100.0

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.+|.|+|+-||.++ +.+++.+|+|...-.-    ..|++...+++..-+++..     ..+++-+.-.+.+|-|
T Consensus        23 yri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~----~~~~e~~~rEid~~rkf~s-----~~vl~l~dh~l~~~~D   93 (302)
T KOG2345|consen   23 YRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS----QEDIEEALREIDNHRKFNS-----PNVLRLVDHQLREEKD   93 (302)
T ss_pred             EEEeeeecCCCceeeeeecccCcccchhhheeeccc----hHHHHHHHHHHHHHHhhCC-----cchHHHHHHHHHhhcc
Confidence            3345679999999999998 6799999999654322    1233333333333333211     1111111111111111


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                                                   .+...+|+..|...|+|.|.+...+...    ...++.+       ++ .+
T Consensus        94 -----------------------------~~~~~yll~Pyy~~Gsl~d~i~~~k~kg----~~~sE~~-------iL-~i  132 (302)
T KOG2345|consen   94 -----------------------------GKHEAYLLLPYYKRGSLLDEIERLKIKG----NFVSEAQ-------IL-WI  132 (302)
T ss_pred             -----------------------------CceeEEEEeehhccccHHHHHHHHhhcC----CccCHHH-------HH-HH
Confidence                                         2344599999999999999887542110    0112222       11 35


Q ss_pred             HHHHHHHHHHHHHCC--ccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETG--ILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~g--ivH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+++.+|++||+..  +.|+|+||+||++..++.+++.|||.+....
T Consensus       133 f~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~  180 (302)
T KOG2345|consen  133 FLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAP  180 (302)
T ss_pred             HHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccc
Confidence            678999999999998  9999999999999999999999999988764

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.35  E-value=4.4e-11  Score=105.68  Aligned_cols=141  Identities=23%  Similarity=0.262  Sum_probs=102.7

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      .++++|+=+.++.+.+ -|.++++|..-|.....-..|.++-+.                              --.+||
T Consensus         2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~------------------------------Rt~~Ea   50 (204)
T COG3642           2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRE------------------------------RTRREA   50 (204)
T ss_pred             chhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHH------------------------------HHHHHH
Confidence            3678888899999866 466699998766554444444443321                              015688


Q ss_pred             HHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVE  322 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~  322 (433)
                      +.+.+.+..     .+.+|.+|........|+|||++|..|.+.+....               .+..        +-+-
T Consensus        51 ril~~a~~~-----GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~~---------------~~~~--------r~vG  102 (204)
T COG3642          51 RILAKAREA-----GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEAR---------------PDLL--------REVG  102 (204)
T ss_pred             HHHHHHHHc-----CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhcc---------------hHHH--------HHHH
Confidence            888887754     58899999888888899999999999998875321               1111        2233


Q ss_pred             HHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          323 ATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       323 ~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+.-||..||+|+||.+.|+++.. +++.++|||+...-+
T Consensus       103 ~~vg~lH~~givHGDLTtsNiIl~~-~~i~~IDfGLg~~s~  142 (204)
T COG3642         103 RLVGKLHKAGIVHGDLTTSNIILSG-GRIYFIDFGLGEFSD  142 (204)
T ss_pred             HHHHHHHhcCeecCCCccceEEEeC-CcEEEEECCcccccc
Confidence            4556799999999999999999955 459999999987543

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.32  E-value=9e-12  Score=122.85  Aligned_cols=144  Identities=23%  Similarity=0.277  Sum_probs=97.0

Q ss_pred             cccCCccccccccceeEEEEecC--CCEEEEEEcCCCchh---hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          158 SFISEEPVAAASFGQVYRGSTLD--GSIVAVKVQRPNLRH---VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       158 ~~~~~~pigsgS~gqVy~a~l~~--G~~VAVKv~~p~~~~---~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      .|.....||+|+||+||.+...+  ...+|+|+.......   .+..+..++..                          
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~--------------------------   72 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKK--------------------------   72 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHH--------------------------
Confidence            45567899999999999999543  358999987643221   23333333331                          


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeeccc-C--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRYL-S--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                                     +..   ....-.+|.+++.. .  ..+++||+.+ |.+|.++......      ..++....   
T Consensus        73 ---------------l~~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~------~~fs~~T~---  124 (322)
T KOG1164|consen   73 ---------------LEK---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPP------GRFSRKTV---  124 (322)
T ss_pred             ---------------Hhh---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCC------CCcCHhHH---
Confidence                           111   12234577777665 2  3469999965 7899997754320      11111111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC-----CcEEEEeccccc
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-----GQIGFLDFGLLC  360 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~-----g~l~l~DFGl~~  360 (433)
                           ..++.++..+++++|+.|++|||+||+|+++...     ..+.++|||+++
T Consensus       125 -----l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  125 -----LRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             -----HHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence                 2355667789999999999999999999999755     359999999999

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=99.32  E-value=5.1e-11  Score=109.01  Aligned_cols=80  Identities=24%  Similarity=0.372  Sum_probs=59.7

Q ss_pred             eEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccC
Q 013944          258 IHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHAD  337 (433)
Q Consensus       258 v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~D  337 (433)
                      +..-+-...+++..+|+|||++|.+|.+.....            +        .    ....+..++.++|..|++|+|
T Consensus       105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~------------e--------~----~~~ki~~~ikqlH~~G~~HGD  160 (229)
T PF06176_consen  105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID------------E--------D----LAEKIVEAIKQLHKHGFYHGD  160 (229)
T ss_pred             eeeeeeeccceeEEEEEEEEecCeecccchhcC------------H--------H----HHHHHHHHHHHHHHcCCccCC
Confidence            334444456778889999999999998764321            0        0    112234578999999999999


Q ss_pred             CCCCceEEccCCcEEEEeccccccc
Q 013944          338 PHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       338 lhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      |||||++++ ++.++++||+..+..
T Consensus       161 ~hpgNFlv~-~~~i~iID~~~k~~~  184 (229)
T PF06176_consen  161 PHPGNFLVS-NNGIRIIDTQGKRMS  184 (229)
T ss_pred             CCcCcEEEE-CCcEEEEECcccccc
Confidence            999999997 456999999988764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.31  E-value=7.7e-12  Score=118.53  Aligned_cols=141  Identities=20%  Similarity=0.321  Sum_probs=98.9

Q ss_pred             ccCCccccccccceeEEEE-ecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGS-TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~-l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |-..+.||.||||..+.|+ +-++++||||.-....+                          ...+-+           
T Consensus        30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--------------------------APQLrd-----------   72 (449)
T KOG1165|consen   30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--------------------------APQLRD-----------   72 (449)
T ss_pred             ceeccccccCcceeeecccccccCceEEEEeccccCC--------------------------cchHHH-----------
Confidence            3346789999999999999 67999999997532111                          111111           


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccC-CCCCCCCchhhhhhhHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTG-SSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                         |-    ++...+..  ...||.+|.-  ..-.+.||||.+ |.+|.|+...... .+              ..  -.
T Consensus        73 ---EY----r~YKlL~g--~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FS--------------vK--TV  126 (449)
T KOG1165|consen   73 ---EY----RTYKLLGG--TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFS--------------VK--TV  126 (449)
T ss_pred             ---HH----HHHHHHcC--CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCccc--------------HH--hH
Confidence               11    22333332  3456877753  335679999976 7899998876532 22              11  12


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccC-----CcEEEEeccccccc
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-----GQIGFLDFGLLCRM  362 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~-----g~l~l~DFGl~~~l  362 (433)
                      .+++.++..-++++|++.+|.||+||+|+||..-     ..|.++||||++++
T Consensus       127 ~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y  179 (449)
T KOG1165|consen  127 AMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY  179 (449)
T ss_pred             HHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence            3577788889999999999999999999999743     45889999999976

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.26  E-value=2.3e-11  Score=129.63  Aligned_cols=156  Identities=21%  Similarity=0.243  Sum_probs=103.3

Q ss_pred             cccccccceeEEEEec----C----CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          164 PVAAASFGQVYRGSTL----D----GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       164 pigsgS~gqVy~a~l~----~----G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ++|+|.||+|++|..+    .    ...||||..+.....   .|...+..++.++..+.                    
T Consensus       303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~---~~~~~~~~El~~m~~~g--------------------  359 (609)
T KOG0200|consen  303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS---SEKKDLMSELNVLKELG--------------------  359 (609)
T ss_pred             eeecccccceEeEEEeecccccccceEEEEEEecccccCc---HHHHHHHHHHHHHHHhc--------------------
Confidence            8999999999999853    1    357999998876544   12222222222222221                    


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhh--hHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQK--LDAKWR  312 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~--~~~~~~  312 (433)
                           .|.|+..+.+.+..             .+..++|+||+..|+|.+++...+ ..+.+... ..+.+.  +... .
T Consensus       360 -----~H~niv~llG~~t~-------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~-~~~~~~~~L~~~-d  419 (609)
T KOG0200|consen  360 -----KHPNIVNLLGACTQ-------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSG-VFPNERDALTTK-D  419 (609)
T ss_pred             -----CCcchhhheeeecc-------------CCceEEEEEeccCCcHHHHHHhccccccccccC-CCccccCCcCHH-H
Confidence                 23344444433322             345699999999999999998776 11110000 000111  2222 2


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ++ .+..||+.++++|.+..++|||+-..|||+..+..++++|||+++...
T Consensus       420 Ll-sfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~  469 (609)
T KOG0200|consen  420 LL-SFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHY  469 (609)
T ss_pred             HH-HHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccC
Confidence            22 367789999999999999999999999999999999999999998543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.26  E-value=4.5e-12  Score=122.02  Aligned_cols=148  Identities=19%  Similarity=0.229  Sum_probs=95.2

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCC--CchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRP--NLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p--~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      -..+|+|.||+|-.+.. .++..|||||++.  ..++....++..+.       +                         
T Consensus        94 ~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLq-------k-------------------------  141 (415)
T KOG0671|consen   94 VDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQ-------K-------------------------  141 (415)
T ss_pred             hhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHH-------H-------------------------
Confidence            45799999999999985 4689999999872  11122222222221       1                         


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEec--eeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVP--KVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP--~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                               +.+.-. .....+.  .-+-++-+..++|.|.+ |.++.|++..++-.+      ++-        ..+.-
T Consensus       142 ---------i~~~DP-~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~------fpi--------~~ir~  196 (415)
T KOG0671|consen  142 ---------INESDP-NGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIP------FPI--------DHIRH  196 (415)
T ss_pred             ---------HHhcCC-CCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccc------cch--------HHHHH
Confidence                     111100 1111222  22235667779999966 678999987543222      111        12234


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEcc--------------------CCcEEEEecccccccCHHH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTS--------------------SGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~--------------------~g~l~l~DFGl~~~l~~~~  366 (433)
                      +..|++.++.+||+.+++|.||||.||++.+                    +-.|+++|||.++.-.+..
T Consensus       197 m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h  266 (415)
T KOG0671|consen  197 MGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH  266 (415)
T ss_pred             HHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc
Confidence            6778889999999999999999999999742                    1348999999988766544

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.24  E-value=3.9e-11  Score=110.94  Aligned_cols=140  Identities=14%  Similarity=0.190  Sum_probs=93.6

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcC-CCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQR-PNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~-p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+-+|.|.||.+-.|+.+ +.+.+|+|..+ |-...   +|                               +.+|..|
T Consensus        28 I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~---~d-------------------------------F~rEfhY   73 (378)
T KOG1345|consen   28 INKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQ---AD-------------------------------FVREFHY   73 (378)
T ss_pred             HHHHhcccceeeEEeeeccCCceEEEeeccCcchhhH---HH-------------------------------HHHHhcc
Confidence            3567999999999999964 67899999654 32211   11                               1223332


Q ss_pred             H---HHHHHHHHHHH-hcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          239 T---LEAANASEFQE-SHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       239 ~---~Ea~n~~~~~~-~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      .   .-|+||..-.+ .|...             .-.+.+|||++-++|.+-+... |        ..        +.-.
T Consensus        74 ~~~Ls~H~hIi~tY~vaFqt~-------------d~YvF~qE~aP~gdL~snv~~~-G--------ig--------E~~~  123 (378)
T KOG1345|consen   74 SFFLSPHQHIIDTYEVAFQTS-------------DAYVFVQEFAPRGDLRSNVEAA-G--------IG--------EANT  123 (378)
T ss_pred             ceeeccchhhhHHHHHHhhcC-------------ceEEEeeccCccchhhhhcCcc-c--------cc--------HHHH
Confidence            2   23444443332 33332             2338999999999987654321 1        11        1122


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEc-cC-CcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYT-SS-GQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~-~~-g~l~l~DFGl~~~l~~  364 (433)
                      ..+..++.+++.++|+.+++|||+|.+||||- +| -++|++|||..+....
T Consensus       124 K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~  175 (378)
T KOG1345|consen  124 KKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT  175 (378)
T ss_pred             HHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence            45677889999999999999999999999984 33 5899999999876643

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=99.16  E-value=1.2e-09  Score=101.17  Aligned_cols=187  Identities=19%  Similarity=0.249  Sum_probs=119.9

Q ss_pred             cccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHH
Q 013944          164 PVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAA  243 (433)
Q Consensus       164 pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~  243 (433)
                      +|.+|-=+.||+|...++..||||+.+.....--     -++....--.++.....+...++..|.         +.|-+
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk-----~~~~Yi~gd~Rf~~~~~~rr~lv~~W~---------~kEf~  120 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFK-----RIRRYIQGDPRFRNSRSNRRKLVFAWA---------RKEFR  120 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhh-----hHHHHHhcChhhhcCCCCHHHHHHHHH---------HHHHH
Confidence            7889999999999987899999999987543311     111111111122223345556666555         57888


Q ss_pred             HHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 013944          244 NASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEA  323 (433)
Q Consensus       244 n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~  323 (433)
                      |+.+..+.     .|.+|+++..  .+++|+|||+.....       ..+...++..   ... + ...+.    ..+..
T Consensus       121 NL~R~~eA-----GVrvP~Pi~~--~~nVLvMEfIg~~g~-------pAP~LkDv~~---e~~-e-~~~~~----~~~v~  177 (268)
T COG1718         121 NLKRAYEA-----GVRVPEPIAF--RNNVLVMEFIGDDGL-------PAPRLKDVPL---ELE-E-AEGLY----EDVVE  177 (268)
T ss_pred             HHHHHHHc-----CCCCCCceee--cCCeEEEEeccCCCC-------CCCCcccCCc---Cch-h-HHHHH----HHHHH
Confidence            99988754     4889998864  567999999965311       0011111110   000 1 11111    12223


Q ss_pred             HHHHHH-HCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCC
Q 013944          324 TLVQLL-ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       324 ~l~~lh-~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                      .+.-|. ..|++|+||..=|||+. +|.+.++|||.+..........+       +..|...+..-+...|.-
T Consensus       178 ~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~a~e~-------L~RDv~Ni~~fF~r~gv~  242 (268)
T COG1718         178 YMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPNAFEF-------LERDVRNIARFFRRKGVE  242 (268)
T ss_pred             HHHHHHHhcCcccccchhhheEEE-CCeEEEEECccccccCCCchHHH-------HHHHHHHHHHHHHHcCCC
Confidence            344444 49999999999999997 89999999999998876554443       446888888888777763

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.10  E-value=1.7e-09  Score=95.44  Aligned_cols=151  Identities=21%  Similarity=0.247  Sum_probs=104.9

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      +.+++-+|+=|.|+++.. .|+..+||-..|.-...-..|.++-+.      +                        ..+
T Consensus        11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~------R------------------------t~~   59 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRK------R------------------------TKQ   59 (229)
T ss_pred             cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHH------H------------------------HHH
Confidence            466888899999999986 799999997666554444555555441      0                        145


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCC-CCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVG-ESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |++-+.+++..     .+.+|.+|..-.....|.|||++| .++.+++...-...       .+....      .. +.+
T Consensus        60 Ear~l~k~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~-------~~d~~~------~~-~~~  120 (229)
T KOG3087|consen   60 EARLLAKCRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDE-------SEDEGL------AE-LAR  120 (229)
T ss_pred             HHHHHHHHHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCc-------ccchhH------HH-HHH
Confidence            77777777654     578899998777788999999998 46666665321111       111110      11 233


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCC-c--EEEEecccccc
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSG-Q--IGFLDFGLLCR  361 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g-~--l~l~DFGl~~~  361 (433)
                      .+-..+.-||..+++|+||..+||++.++| +  +.++|||++..
T Consensus       121 ~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  121 RIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            345567789999999999999999998775 3  58999998653

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.06  E-value=2.1e-09  Score=99.25  Aligned_cols=163  Identities=17%  Similarity=0.154  Sum_probs=91.6

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      -+|++.|..++||+++..+|+.+++|+.+++.....                                     ..++..|
T Consensus         3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~-------------------------------------~~~~~~E   45 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPS-------------------------------------AHDVARE   45 (223)
T ss_pred             ceecCCCccceEEEEEecCCcceEEEeCCCcccCcc-------------------------------------cccHHHH
Confidence            468999999999999987778999998765422100                                     0112345


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCC-----ceEEEeeccCCCCcchhhhh---------------------ccCCCC
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSR-----KRVLTMEWMVGESPTDLISL---------------------STGSSV  295 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~-----~~~LVmE~i~G~~L~~~l~~---------------------~~~~~~  295 (433)
                      +..+..+.+.     .+.+|+++.....     ..+++|||++|.++.+....                     -...+.
T Consensus        46 ~~~~~~l~~~-----~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~  120 (223)
T cd05154          46 YRVLRALAGT-----GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDP  120 (223)
T ss_pred             HHHHHHhhCC-----CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCh
Confidence            5555444331     4567877765433     45899999999988765410                     000000


Q ss_pred             C--CCCch------hhhhhhHHHHHHHHHHH---HHHHHHHHHH-------HHCCccccCCCCCceEEcc--CCcEEEEe
Q 013944          296 D--GSSTH------LDRQKLDAKWRLLDLVN---KGVEATLVQL-------LETGILHADPHPGNLRYTS--SGQIGFLD  355 (433)
Q Consensus       296 ~--~~~~~------~~~~~~~~~~~l~~l~~---~~i~~~l~~l-------h~~givH~DlhpgNilv~~--~g~l~l~D  355 (433)
                      .  .....      .......+...+.....   ..+...+..+       ....++|+|+||+||++++  ++.+.++|
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID  200 (223)
T cd05154         121 AAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLD  200 (223)
T ss_pred             hhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEe
Confidence            0  00000      00000000000000000   0011112222       2367899999999999998  56789999


Q ss_pred             cccccccCHHH
Q 013944          356 FGLLCRMERKH  366 (433)
Q Consensus       356 FGl~~~l~~~~  366 (433)
                      |+.++.-++..
T Consensus       201 ~e~~~~g~~~~  211 (223)
T cd05154         201 WELATLGDPLA  211 (223)
T ss_pred             ccccccCChHH
Confidence            99988766543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.96  E-value=1.9e-08  Score=94.18  Aligned_cols=181  Identities=18%  Similarity=0.206  Sum_probs=112.0

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK-RKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~-~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .++||-|-=+.||.|...+|.++|||.-|-|.. ++.. ++--+      ..+.. .+..+-.+.         -+.-..
T Consensus        96 G~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sFrk-vk~~R------~y~~~~~h~sWl~~s---------Rl~A~r  158 (304)
T COG0478          96 GTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SFRK-VKRNR------DYLADKEHGSWLYVS---------RLAAER  158 (304)
T ss_pred             ccccccCccceEEEEECCCCCEEEEEEeecCch-hhhh-hcchh------hhhccccCcchhhhH---------HHHHHH
Confidence            368999999999999988999999999876632 2110 00000      00000 000100000         011133


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |...+.++.     ...+.||+++..  ++.++|||+++|..|...--     ++        .+.    ..++..    
T Consensus       159 Ef~~L~~L~-----~~G~~VP~P~~~--nRHaVvMe~ieG~eL~~~r~-----~~--------en~----~~il~~----  210 (304)
T COG0478         159 EFEALQRLY-----PEGVKVPKPIAW--NRHAVVMEYIEGVELYRLRL-----DV--------ENP----DEILDK----  210 (304)
T ss_pred             HHHHHHHhh-----hcCCCCCCcccc--ccceeeeehcccceeecccC-----cc--------cCH----HHHHHH----
Confidence            444555543     234788998853  67799999999988875421     00        001    111111    


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      |...+.-+.+.|++|+|+.+=||++++||.+.++||=.+...+......+       +.+|.+.+..-+..-..
T Consensus       211 il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky~  277 (304)
T COG0478         211 ILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKYG  277 (304)
T ss_pred             HHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhcc
Confidence            22344445589999999999999999999999999999888776554433       44677777777765433

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.95  E-value=4.6e-09  Score=104.31  Aligned_cols=138  Identities=19%  Similarity=0.266  Sum_probs=88.9

Q ss_pred             hhhhcc---ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCc--hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHH
Q 013944          153 VESFFS---FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL--RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYAD  226 (433)
Q Consensus       153 ~~~~f~---~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~--~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~  226 (433)
                      +.++|.   |+-...+|-|-|++||.|.. .+.+-||+||++..-  .+....+|++|+.+       ..          
T Consensus        71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v-------~~----------  133 (590)
T KOG1290|consen   71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQV-------RE----------  133 (590)
T ss_pred             ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHH-------Hh----------
Confidence            455564   66778999999999999984 577899999998532  33333445444421       10          


Q ss_pred             HHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCCCcchhhhhcc--CCCCCCC
Q 013944          227 ELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGESPTDLISLST--GSSVDGS  298 (433)
Q Consensus       227 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~~L~~~l~~~~--~~~~~~~  298 (433)
                                     +.        -.+...-.|.+.+..+.      ...+||.|++ |-.|..++....  |+++   
T Consensus       134 ---------------~D--------p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl---  186 (590)
T KOG1290|consen  134 ---------------GD--------PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPL---  186 (590)
T ss_pred             ---------------cC--------CCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcH---
Confidence                           00        00011122333333321      3449999987 678888776542  3321   


Q ss_pred             CchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCceEEcc
Q 013944          299 STHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTS  347 (433)
Q Consensus       299 ~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~-~givH~DlhpgNilv~~  347 (433)
                                   ...+-+.++|..+|.|||+ .||+|.|+||.|||+..
T Consensus       187 -------------~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  187 -------------SCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS  223 (590)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence                         1223477888999999996 79999999999999854

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.87  E-value=3.2e-08  Score=94.69  Aligned_cols=104  Identities=13%  Similarity=0.043  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc-------CCceEEEeeccCCC-CcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL-------SRKRVLTMEWMVGE-SPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-------~~~~~LVmE~i~G~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                      ..|.+++.++.+.     .+.+|.++...       ....+||||+++|. +|.+++......+      ..+    ...
T Consensus        76 ~rE~~~l~~L~~~-----GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~------~~~----~~~  140 (268)
T PRK15123         76 DREWRAIHRLHEV-----GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNP------PDP----RLK  140 (268)
T ss_pred             HHHHHHHHHHHHc-----CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccC------CCH----HHH
Confidence            5678888888753     45666663221       23468999999986 7888864211000      000    111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc-------CCcEEEEecccccc
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-------SGQIGFLDFGLLCR  361 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~-------~g~l~l~DFGl~~~  361 (433)
                          .-+...+...+..||..|++|+|++|+|||++.       ++++.++||+.+..
T Consensus       141 ----~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        141 ----RMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             ----HHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence                123445677889999999999999999999975       46899999998853

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.87  E-value=3.5e-08  Score=94.35  Aligned_cols=147  Identities=23%  Similarity=0.324  Sum_probs=92.2

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.+|.|+||+||++...  ..+++|+..+..........                                   .+..|
T Consensus         5 ~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~-----------------------------------~~~~e   47 (384)
T COG0515           5 LRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVE-----------------------------------RFLRE   47 (384)
T ss_pred             EEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHH-----------------------------------HHHHH
Confidence            457899999999999865  88999988765433210000                                   01112


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ..    ....+.+.+  .+...+..+.  ...+++++++.|+.+.+++......     ....+.        ....+..
T Consensus        48 ~~----~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~--------~~~~~~~  108 (384)
T COG0515          48 IQ----ILASLNHPP--NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRK-----GPLSES--------EALFILA  108 (384)
T ss_pred             HH----HHHHccCCc--ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccc-----cCCCHH--------HHHHHHH
Confidence            22    111222221  1222222222  2258999999999999666533200     001111        1123455


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCC-cEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g-~l~l~DFGl~~~l~~  364 (433)
                      ++..++.++|..|++|+|+||.|++++..+ .++++|||.+..+..
T Consensus       109 ~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~  154 (384)
T COG0515         109 QILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD  154 (384)
T ss_pred             HHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence            567778999999999999999999999888 799999999885544

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.83  E-value=2.7e-09  Score=117.69  Aligned_cols=73  Identities=12%  Similarity=0.056  Sum_probs=49.8

Q ss_pred             ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC
Q 013944          270 KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG  349 (433)
Q Consensus       270 ~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g  349 (433)
                      ..+++|||+ +++|.+++.....       .+++.        ....+..+++.+|.|||+.||+|||+||.|||++..|
T Consensus        54 ~~~~~~e~~-~~~L~~~l~~~~~-------~~~~~--------~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~  117 (793)
T PLN00181         54 SIVRALECE-DVSLRQWLDNPDR-------SVDAF--------ECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFN  117 (793)
T ss_pred             hhhhhhccC-CccHHHHHhcccc-------cccHH--------HHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccC
Confidence            347889987 4699998853211       01111        1123667888999999999999999999999996544


Q ss_pred             cEEEEeccc
Q 013944          350 QIGFLDFGL  358 (433)
Q Consensus       350 ~l~l~DFGl  358 (433)
                      .++++|||+
T Consensus       118 ~~k~~d~~~  126 (793)
T PLN00181        118 HVSFIESAS  126 (793)
T ss_pred             cEEEeeccc
Confidence            444444433

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.70  E-value=8.4e-08  Score=88.41  Aligned_cols=104  Identities=18%  Similarity=0.241  Sum_probs=74.7

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCC-CcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGE-SPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                      ..|.+|+.++.+     ..+.+|+++....      .+.+|+||+++|. +|.+++......+        .    ... 
T Consensus        59 ~~E~~~~~~L~~-----~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~--------~----~~~-  120 (206)
T PF06293_consen   59 KREWRNLQRLRE-----AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLD--------P----SQR-  120 (206)
T ss_pred             HHHHHHHHHHHH-----cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccc--------h----hhH-
Confidence            557788888875     3466777765322      2458999999985 7888775421111        0    011 


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC---cEEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QIGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g---~l~l~DFGl~~~l~  363 (433)
                         .-+...+...+..||..|++|+|++|+|||++.++   ++.++||+-++.-.
T Consensus       121 ---~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  121 ---RELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             ---HHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence               22445567788999999999999999999999887   89999999887655

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.59  E-value=1e-06  Score=81.63  Aligned_cols=35  Identities=34%  Similarity=0.572  Sum_probs=25.3

Q ss_pred             CCccccCCCCCceEEc-cCCcEEEEecccccccCHH
Q 013944          331 TGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       331 ~givH~DlhpgNilv~-~~g~l~l~DFGl~~~l~~~  365 (433)
                      .+++|+|+||+||+++ .++++.++||+.++.-++.
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~  201 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPA  201 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETH
T ss_pred             cEEEEeccccccceeeeccceeEEEecccceECCHH
Confidence            5799999999999999 6677889999998877654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.58  E-value=1.4e-07  Score=90.61  Aligned_cols=171  Identities=18%  Similarity=0.177  Sum_probs=86.3

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..++||.|+++.||.++. .+|+++|||+..-.. +.-..+++.++...-....+.+..                     
T Consensus        16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~~---------------------   73 (288)
T PF14531_consen   16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGVK---------------------   73 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT-----------------------
T ss_pred             EccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccCC---------------------
Confidence            456899999999999996 579999999865322 333334444443221111110000                     


Q ss_pred             HHHHHHHHHHHhcCCCCCeEece---eecccC-------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPK---VFRYLS-------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~---v~~~~~-------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                       ....+......+.-..-+.+|.   ....-.       -..++.|.-.. ++|.+++..-...+.       .......
T Consensus        74 -~p~~a~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~-------~~~~l~~  144 (288)
T PF14531_consen   74 -NPKEAYRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQ-------THSPLAF  144 (288)
T ss_dssp             -SHHHHHHHH-B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTT-------TSHHHHH
T ss_pred             -CHHHHHHhceEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhccc-------ccchhHH
Confidence             0111111111111111122221   010000       13367777664 567666543110000       0001111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+  ..+..++...+..+|..|++|+|++|.|++++++|.+.|.||+.+.....
T Consensus       145 ~ar--l~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~  197 (288)
T PF14531_consen  145 AAR--LSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT  197 (288)
T ss_dssp             HHH--HHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTE
T ss_pred             HHH--HHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCc
Confidence            111  12445566778899999999999999999999999999999998765543

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.57  E-value=5.7e-07  Score=84.11  Aligned_cols=35  Identities=26%  Similarity=0.302  Sum_probs=29.3

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccCHHH
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~  366 (433)
                      ..++|+|+||+||+++++| +.++||+.+..=++..
T Consensus       153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gdp~~  187 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG-TYWIDLGDFGYGNPLF  187 (226)
T ss_pred             CceEecCCCCCcEEEcCCC-cEEEechhcCcCCHHH
Confidence            3578999999999999888 9999999987655543

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK10593 hypothetical protein; Provisional

Probab=98.54  E-value=1.3e-06  Score=85.25  Aligned_cols=92  Identities=17%  Similarity=0.158  Sum_probs=62.6

Q ss_pred             HHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCC-chhhHHHHHHHHHHHHHHHHHHHhhc
Q 013944          140 IAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPN-LRHVVVRDIYILRIGLGLLQKIAKRK  218 (433)
Q Consensus       140 ~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~-~~~~~~~Dl~~l~~~~~~~~~~~~~~  218 (433)
                      .+.+.+.+.+|..+.      ..++||.|.+++||+....+| .+.+|+.+.. ....                      
T Consensus         3 ~~~~~~~~~~~~~~~------~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~~~----------------------   53 (297)
T PRK10593          3 QLRAELSHLLGEKLS------RVECISEQPYAALWALYDSQG-NPMPLMARSFSTPGV----------------------   53 (297)
T ss_pred             HHHHHHHHHhchhhh------eeeecCCccceeEEEEEcCCC-CEEEEEecccccchH----------------------
Confidence            455566677776332      356999999999999876555 5778886542 1222                      


Q ss_pred             CCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeeccc-----CCceEEEeeccCCCCc
Q 013944          219 SDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYL-----SRKRVLTMEWMVGESP  283 (433)
Q Consensus       219 ~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-----~~~~~LVmE~i~G~~L  283 (433)
                                         +..|+.++..+.+    ...+.||+|+...     .+..+|||||++|.++
T Consensus        54 -------------------~~~Ea~~L~~L~~----~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         54 -------------------AQQEAWKLSMLAR----SGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV  100 (297)
T ss_pred             -------------------HHHHHHHHHHHcc----CCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence                               2446667666643    2358899999632     3567999999999876

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.48  E-value=6.3e-08  Score=102.70  Aligned_cols=113  Identities=19%  Similarity=0.113  Sum_probs=72.8

Q ss_pred             eeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEE
Q 013944          275 MEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFL  354 (433)
Q Consensus       275 mE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~  354 (433)
                      ||||++ +|..++.......              ..+  ...+.+++..+++|+|..|+-|||+||.|++++.+|.++++
T Consensus       400 mE~~~~-Dlf~~~~~~~~~~--------------~~e--~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~  462 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSNGKLT--------------PLE--ADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKII  462 (601)
T ss_pred             hhcccH-HHHHHHhcccccc--------------hhh--hhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEe
Confidence            999999 8888776431111              000  14567888899999999999999999999999999999999


Q ss_pred             ecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCCCCChHHHH
Q 013944          355 DFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVT  405 (433)
Q Consensus       355 DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~~d~~~~~  405 (433)
                      |||.+....-....... ...++.-.|.+.+.+.+...-+-+..+|+|..+
T Consensus       463 Dfg~~~vf~~~~e~~~~-~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~  512 (601)
T KOG0590|consen  463 DFGAASVFRYPWEKNIH-ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCG  512 (601)
T ss_pred             ecCcceeeccCcchhhh-hhcCcccCCcCcCcccccccccCcchhhhhhcc
Confidence            99998765432221111 112233333333334444444444445555443

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.48  E-value=3.8e-06  Score=79.28  Aligned_cols=37  Identities=24%  Similarity=0.327  Sum_probs=31.0

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccCHHHH
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ  367 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~  367 (433)
                      ..++|+|+||+||++++++.+.|+||+.++.-++..-
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~~D  199 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRYQD  199 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccccccHHHH
Confidence            4589999999999999877788999999886666443

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PRK05231 homoserine kinase; Provisional

Probab=98.44  E-value=4.6e-06  Score=81.97  Aligned_cols=35  Identities=29%  Similarity=0.565  Sum_probs=28.3

Q ss_pred             HCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          330 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       330 ~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..|++|+|+||+||+++.+....++||+.+..=..
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~~  220 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACNDKL  220 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEecccccCCch
Confidence            35899999999999998655458999998865443

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.43  E-value=3.2e-07  Score=89.25  Aligned_cols=131  Identities=15%  Similarity=0.079  Sum_probs=88.7

Q ss_pred             CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc
Q 013944          268 SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTS  347 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~  347 (433)
                      ....+..+-+..-+.|..++...++.++........       .++ -.++.|+.+++.++|++|++|.|+-..|++|++
T Consensus       360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt-------~ql-V~masQla~am~hlh~~~ViHkDiAaRNCvIdd  431 (563)
T KOG1024|consen  360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTT-------IQL-VLMASQLAMAMEHLHNHGVIHKDIAARNCVIDD  431 (563)
T ss_pred             cCcceEEEeccCcchHHHHHHHhccCCCccccchhH-------HHH-HHHHHHHHHHHHHHHhcCcccchhhhhcceehh
Confidence            344455667777789999998777654333322211       112 246778899999999999999999999999999


Q ss_pred             CCcEEEEecccccccCH---------HHHHH---HHHHHH---HHHhcCHHHHHHHHHhcCCC--CCCCChHHHHH
Q 013944          348 SGQIGFLDFGLLCRMER---------KHQFA---MLASIV---HIVNGDWQSLVHSLTEMDVV--RPGTNTLRVTM  406 (433)
Q Consensus       348 ~g~l~l~DFGl~~~l~~---------~~~~~---~~~~~~---~~~~~d~~~~~~~l~~~g~~--~~~~d~~~~~~  406 (433)
                      .-+++|+|=.+++.+=+         +.|+-   -.+.+.   .....|.|+++-.+.++..+  .|-.+++.|..
T Consensus       432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm  507 (563)
T KOG1024|consen  432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM  507 (563)
T ss_pred             heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH
Confidence            99999999999887622         22211   111121   13356899999888876543  45566665553

>PRK09902 hypothetical protein; Provisional

Probab=98.37  E-value=1.1e-05  Score=73.80  Aligned_cols=153  Identities=21%  Similarity=0.171  Sum_probs=96.6

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ++++---+.|+.+.|++-.+ +|+.+=+|-|...+......                  ..              -+--|
T Consensus        20 wve~pN~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~------------------P~--------------g~ptf   66 (216)
T PRK09902         20 WVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRY------------------PF--------------GRPTI   66 (216)
T ss_pred             eecCCCcCCCCcceEEEEEe-CCcEEEEEeccCcccccccC------------------CC--------------CchHH
Confidence            45555577899999999765 66789999886433322100                  00              01112


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc------CCceEEEeeccCCC-CcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL------SRKRVLTMEWMVGE-SPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LVmE~i~G~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                      ..|-.++.++.+.     .+.||+++..-      .-+-+||+|-++|. +|.+++.... .     ...++..+     
T Consensus        67 ~rE~~~L~~L~~~-----GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~-~-----~~~~~~~k-----  130 (216)
T PRK09902         67 VREVAVIKELERA-----GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHA-V-----SPYSDEVR-----  130 (216)
T ss_pred             HHHHHHHHHHHHc-----CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCC-c-----CCcchHHH-----
Confidence            4455667666643     34567666321      12468999988764 7777764321 1     01111111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc--EEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ--IGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~--l~l~DFGl~~~l~  363 (433)
                         ..+...+...+..||..|+.|+||.+-||+++.+|+  ++++||--++..-
T Consensus       131 ---~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~l  181 (216)
T PRK09902        131 ---QAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRL  181 (216)
T ss_pred             ---HHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchhh
Confidence               123344667899999999999999999999987777  9999998766543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.35  E-value=1.9e-07  Score=95.92  Aligned_cols=124  Identities=20%  Similarity=0.177  Sum_probs=83.0

Q ss_pred             CCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCcc
Q 013944          255 FPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGIL  334 (433)
Q Consensus       255 ~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~giv  334 (433)
                      .+.+.-+...-...++.+++++|..|+.+...+......        .+.   +     .......+..++.++|..|++
T Consensus        56 ~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f--------~~~---~-----~~~~~aelaLald~lh~l~ii  119 (612)
T KOG0603|consen   56 TPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMF--------DEL---D-----VAFYLAELALALDHLHKLGIA  119 (612)
T ss_pred             CCceeeeeeeeccccchhHhhhhcccchhhhccccCCch--------HHH---H-----HHHHHHHHHHHHhhcchhHHH
Confidence            444444444445568889999999998876555432110        000   0     112222345589999999999


Q ss_pred             ccCCCCCceEEccCCcEEEEecccccccCHHHHH--H---HHH-HHH-HHHhcCHHHHHHHHHhcCC
Q 013944          335 HADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF--A---MLA-SIV-HIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       335 H~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~--~---~~~-~~~-~~~~~d~~~~~~~l~~~g~  394 (433)
                      |+|+|+.||+++.+|.+++.|||..+..-+....  .   +.. .+. +....|||+++...++|-.
T Consensus       120 yrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~gh~~a~D~ws~gvl~fellt  186 (612)
T KOG0603|consen  120 YRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLT  186 (612)
T ss_pred             HhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhhccCCcccchhhhhhHHHHhh
Confidence            9999999999999999999999999987655433  1   111 122 4556788887777777643

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.34  E-value=6.4e-06  Score=77.35  Aligned_cols=37  Identities=27%  Similarity=0.344  Sum_probs=29.6

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccCHHHH
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ  367 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~  367 (433)
                      .+++|+|+||+|++++.++...++||+.+..=++..-
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~~D  200 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPACD  200 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChHHH
Confidence            4689999999999997655457999999877666443

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.32  E-value=2.7e-07  Score=99.55  Aligned_cols=89  Identities=22%  Similarity=0.213  Sum_probs=57.5

Q ss_pred             HHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH----HHHHHHHHH-HH----hcCHHHHHHHHH-hc
Q 013944          323 ATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ----FAMLASIVH-IV----NGDWQSLVHSLT-EM  392 (433)
Q Consensus       323 ~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~----~~~~~~~~~-~~----~~d~~~~~~~l~-~~  392 (433)
                      .+++|+|..|++|+|+||.|++|+.-|++|+.|||+++..-....    ...++...+ +.    .+-.+.++...+ .-
T Consensus       154 la~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrq  233 (1205)
T KOG0606|consen  154 LAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQ  233 (1205)
T ss_pred             HHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhh
Confidence            478999999999999999999999999999999998764322111    111111111 11    112222333333 33


Q ss_pred             CCCCCCCChHHHHHHHHHHh
Q 013944          393 DVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       393 g~~~~~~d~~~~~~~l~~~l  412 (433)
                      |+ ...+|+|.++..+++.|
T Consensus       234 gy-gkpvdwwamGiIlyeFL  252 (1205)
T KOG0606|consen  234 GY-GKPVDWWAMGIILYEFL  252 (1205)
T ss_pred             cc-CCCccHHHHHHHHHHHh
Confidence            44 45688888888888776

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=98.29  E-value=1e-05  Score=78.55  Aligned_cols=35  Identities=26%  Similarity=0.462  Sum_probs=29.6

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .+++|+|+||+|++++.++.+.++||+.+..-...
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~~~  209 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACTDAFL  209 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcCchHH
Confidence            58999999999999998777789999988765443

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.28  E-value=1.6e-05  Score=80.10  Aligned_cols=109  Identities=20%  Similarity=0.172  Sum_probs=67.3

Q ss_pred             CCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCC-CEEEEEEcCCCchh---hHHHHHHHHHHHHH
Q 013944          134 PPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDG-SIVAVKVQRPNLRH---VVVRDIYILRIGLG  209 (433)
Q Consensus       134 p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G-~~VAVKv~~p~~~~---~~~~Dl~~l~~~~~  209 (433)
                      .++..+.+.+.+.+..|.--.  -+....+++|.|.+..||+....+| +.|+||...|.++.   ....+..-      
T Consensus         5 ~~l~~~~v~~yl~~~~~~~~~--~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR------   76 (401)
T PRK09550          5 ETLTEEDAVEYAALKLGLFDP--KALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDR------   76 (401)
T ss_pred             eeCCHhHHHHHHHHhcCCCCC--cccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHH------
Confidence            345556666666444332100  1223456899999999999998777 58999987664331   00001100      


Q ss_pred             HHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCC
Q 013944          210 LLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGES  282 (433)
Q Consensus       210 ~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~  282 (433)
                                                  ...|+..+..+.+.    ....+|++|..-....++||||+++..
T Consensus        77 ----------------------------~~~Eae~L~~l~~~----~p~~VPkV~~~D~~~~~lVME~L~~~~  117 (401)
T PRK09550         77 ----------------------------ARIEAEALKIQAKY----VPDLVPKVYHYDEELAVTVMEDLSDHK  117 (401)
T ss_pred             ----------------------------HHHHHHHHHHHHhh----CCCCCCeEEEECCCCCEEEEecCCCcc
Confidence                                        13355555555432    334799999877777899999998754

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=98.18  E-value=2.4e-05  Score=76.53  Aligned_cols=173  Identities=19%  Similarity=0.276  Sum_probs=104.0

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHh--hcCCHHHHHHHHHHHhHhhhchHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK--RKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~--~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..|..|-=+-||-|+-.+|..+|||+.+-.+.---.+|-.+-. ..    ++..  -..+...++.-|+         ..
T Consensus       150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~G-Ef----RFRhgyck~NPRKMVk~WA---------EK  215 (520)
T KOG2270|consen  150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSG-EF----RFRHGYCKHNPRKMVKTWA---------EK  215 (520)
T ss_pred             cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccc-ee----eeecccccCCcHHHHHHHH---------HH
Confidence            4788888999999998899999999977655221112211100 00    0000  1235666666666         56


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |-+|+.|+...     .+.+|+++  +-...||||+|+.+-....       +-..++ .++..       .+..+.. +
T Consensus       216 E~RNLkRl~~a-----GIP~PePI--lLk~hVLVM~FlGrdgw~a-------PkLKd~-~ls~~-------ka~~~Y~-~  272 (520)
T KOG2270|consen  216 EMRNLKRLNNA-----GIPCPEPI--LLKNHVLVMEFLGRDGWAA-------PKLKDA-SLSTS-------KARELYQ-Q  272 (520)
T ss_pred             HHHHHHHHHhc-----CCCCCCce--eeecceEeeeeccCCCCcC-------cccccc-cCChH-------HHHHHHH-H
Confidence            88899998743     35556655  4466799999996321110       000000 01100       0112222 2


Q ss_pred             HHHHHHHH-HHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHH
Q 013944          321 VEATLVQL-LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLAS  373 (433)
Q Consensus       321 i~~~l~~l-h~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~  373 (433)
                      +...++-| +.+++||+||.-=|+|+ .+|.+.++|-+.+...+......++..
T Consensus       273 ~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~lyiIDVSQSVE~DHP~aldFLRm  325 (520)
T KOG2270|consen  273 CVRIMRRLYQKCRLVHADLSEFNLLY-HDGKLYIIDVSQSVEHDHPHALDFLRM  325 (520)
T ss_pred             HHHHHHHHHHHhceeccchhhhhheE-ECCEEEEEEccccccCCChhHHHHHHH
Confidence            22233333 56899999999999999 789999999999988877665555543

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.15  E-value=8.1e-07  Score=96.27  Aligned_cols=45  Identities=22%  Similarity=0.208  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLC  360 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~  360 (433)
                      .++-|+..++.++|+.|+.|+|+|.+|||++.=+-+.|.||..-+
T Consensus       124 WiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFK  168 (1431)
T KOG1240|consen  124 WIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFK  168 (1431)
T ss_pred             HHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccC
Confidence            466778889999999999999999999999998899999997654

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.07  E-value=6.7e-05  Score=70.20  Aligned_cols=34  Identities=24%  Similarity=0.372  Sum_probs=29.3

Q ss_pred             CCccccCCCCCceEEcc-CCcEEEEecccccccCH
Q 013944          331 TGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMER  364 (433)
Q Consensus       331 ~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l~~  364 (433)
                      .+++|+|++|+||++++ ++.+.++||-.++.-.+
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~  204 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR  204 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch
Confidence            46999999999999997 58899999998875554

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PLN02876 acyl-CoA dehydrogenase

Probab=98.05  E-value=0.00015  Score=80.54  Aligned_cols=108  Identities=12%  Similarity=0.093  Sum_probs=64.0

Q ss_pred             CCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCC---CEEEEEEcCCCchhhHHHHHHHHHHHHHHH
Q 013944          135 PFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDG---SIVAVKVQRPNLRHVVVRDIYILRIGLGLL  211 (433)
Q Consensus       135 ~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G---~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~  211 (433)
                      +++.+.+.+.+.+.++. ...-.....-++++.|..+.+|+....+|   ..+++|...++....-.             
T Consensus        17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~-------------   82 (822)
T PLN02876         17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSA-------------   82 (822)
T ss_pred             cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccH-------------
Confidence            36666676677655431 11100113456899999999999876544   47888877654311000             


Q ss_pred             HHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccC-----CceEEEeeccCCCCcc
Q 013944          212 QKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLS-----RKRVLTMEWMVGESPT  284 (433)
Q Consensus       212 ~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-----~~~~LVmE~i~G~~L~  284 (433)
                                              -++..|.+.+..+..    ...+.||+++....     +..++||||++|..+.
T Consensus        83 ------------------------~~~~rE~~~l~~L~~----~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~  132 (822)
T PLN02876         83 ------------------------HAVEREYQVLRALGE----HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFV  132 (822)
T ss_pred             ------------------------HHHHHHHHHHHHHhh----cCCCCCCcEEEEecCCCcCCCceEEEEecCCcccC
Confidence                                    011334444444432    24578899887543     3578999999997654

>PRK06148 hypothetical protein; Provisional

Probab=98.03  E-value=0.00024  Score=80.26  Aligned_cols=56  Identities=21%  Similarity=0.360  Sum_probs=44.8

Q ss_pred             HhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCC
Q 013944          129 LHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPN  192 (433)
Q Consensus       129 lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~  192 (433)
                      +....|.++.+++.+.+++.+|..-       ..++|++ ..-++|+.+..+|+.+++|+.+|.
T Consensus         4 ~~~~~p~~s~~~~~~~~~~~ygl~~-------~~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~   59 (1013)
T PRK06148          4 LSHPAPEFTTKDAEALLAQHFGISA-------TATPLDG-ERDLNFRLTTDDGADYILKIVNPS   59 (1013)
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCce-------EEeecCC-cCCceEEEEeCCCCeEEEEEcCCc
Confidence            3446788999999999999999742       1357754 568999998878999999999986

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.03  E-value=5.3e-05  Score=72.03  Aligned_cols=34  Identities=26%  Similarity=0.334  Sum_probs=29.0

Q ss_pred             CccccCCCCCceEEccCCcEEEEecccccccCHHH
Q 013944          332 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       332 givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~  366 (433)
                      .++|+|++|+||++++++ +.++||..++.=++..
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp~~  180 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIAL  180 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccCcCCHHH
Confidence            589999999999998877 8999999888666543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PLN02756 S-methyl-5-thioribose kinase

Probab=98.02  E-value=0.00013  Score=73.58  Aligned_cols=106  Identities=16%  Similarity=0.236  Sum_probs=64.9

Q ss_pred             CCCCCCHHHHHHHHHHH------hCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCchhh---HHHHHH
Q 013944          132 QIPPFPRSIAMKIIEEE------LGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHV---VVRDIY  202 (433)
Q Consensus       132 ~~p~~~~~~~~~~l~~e------lg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~---~~~Dl~  202 (433)
                      ...+++.+.+.+.+.+.      +|..    +.....++||-|....||+... ++..|+||...|.++-.   ...++.
T Consensus         5 ~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~-~~~svVVKqa~p~~r~vga~wpl~~~   79 (418)
T PLN02756          5 EFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVS-SSGSFVIKQALPYIRCIGESWPMTKE   79 (418)
T ss_pred             ccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEc-CCccEEEEeCCccccCCCccccCCcc
Confidence            34456666666555443      3221    1223567899999999999875 45679999888765421   000100


Q ss_pred             HHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCC
Q 013944          203 ILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVG  280 (433)
Q Consensus       203 ~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G  280 (433)
                      -.                                  ..|+..+....+    ...+.||++|.......+++|||+++
T Consensus        80 R~----------------------------------~~Ea~aL~~~~~----~~p~~VPkVy~~ded~~vlvME~L~~  119 (418)
T PLN02756         80 RA----------------------------------YFEATALREHGR----LCPDHVPEVYHFDRTMALIGMRYLEP  119 (418)
T ss_pred             HH----------------------------------HHHHHHHHHhhh----cCCCCCCeEEEECCCCCEEEEeecCC
Confidence            00                                  123334433332    23468999998877888999999988

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.01  E-value=8.4e-05  Score=65.77  Aligned_cols=126  Identities=22%  Similarity=0.243  Sum_probs=80.4

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchh-hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRH-VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~-~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+-+|.|..|.||.+.+ .|.+||+|+++++... ++..                                         
T Consensus        27 ~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~r~~l~k-----------------------------------------   64 (201)
T COG2112          27 EKELAKGTTSVVYLGEW-RGGEVALKVRRRDSPRRNLEK-----------------------------------------   64 (201)
T ss_pred             hhhhhcccccEEEEeec-cCceEEEEEecCCcchhhHHH-----------------------------------------
Confidence            45799999999999988 5669999999976543 3332                                         


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ||+-+.....      .-..|++|.  -++.++.|||++|.+|.+.....            +      .+.+...+.  
T Consensus        65 EakiLeil~g------~~~~p~vy~--yg~~~i~me~i~G~~L~~~~~~~------------~------rk~l~~vlE--  116 (201)
T COG2112          65 EAKILEILAG------EGVTPEVYF--YGEDFIRMEYIDGRPLGKLEIGG------------D------RKHLLRVLE--  116 (201)
T ss_pred             HHHHHHHhhh------cCCCceEEE--echhhhhhhhhcCcchhhhhhcc------------c------HHHHHHHHH--
Confidence            3333333221      124677774  35557789999999987764311            0      111222222  


Q ss_pred             HHHHHHHHHHCCccccCCCC-CceEEccCCcEEEEeccccc
Q 013944          321 VEATLVQLLETGILHADPHP-GNLRYTSSGQIGFLDFGLLC  360 (433)
Q Consensus       321 i~~~l~~lh~~givH~Dlhp-gNilv~~~g~l~l~DFGl~~  360 (433)
                        . -.-|-..||-|..++- -..++..++++.|+||--++
T Consensus       117 --~-a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At  154 (201)
T COG2112         117 --K-AYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT  154 (201)
T ss_pred             --H-HHHHHHhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence              1 2224467999999864 44444466799999998877

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=98.00  E-value=0.00016  Score=70.82  Aligned_cols=34  Identities=32%  Similarity=0.666  Sum_probs=29.6

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+++|+|+|++|+++++++...++||+.+..-..
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~~  220 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACTDAR  220 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeecccccCcch
Confidence            6899999999999999887778999999865544

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=97.98  E-value=2e-05  Score=69.98  Aligned_cols=41  Identities=20%  Similarity=0.151  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..+|.|+|+.|      ||+||+++.++.+++  ||++.....
T Consensus        21 ~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~   61 (176)
T smart00750       21 AVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP   61 (176)
T ss_pred             HHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc
Confidence            35667888999999998      999999999999998  999887654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.93  E-value=0.0001  Score=73.81  Aligned_cols=109  Identities=17%  Similarity=0.075  Sum_probs=65.5

Q ss_pred             CCCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecC-CCEEEEEEcCCCchh--hHHHHHHHHHHHH
Q 013944          132 QIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLD-GSIVAVKVQRPNLRH--VVVRDIYILRIGL  208 (433)
Q Consensus       132 ~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~-G~~VAVKv~~p~~~~--~~~~Dl~~l~~~~  208 (433)
                      ...++..+.+.+.+.+.+|. +..- +...-++||-|...-||++...+ ++.|+||--.|-++-  ....++.-.    
T Consensus         6 ~y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~----   79 (409)
T PRK12396          6 KYFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRI----   79 (409)
T ss_pred             cceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHH----
Confidence            44566677777777655552 1110 12235799999999999998743 678999976654431  111111111    


Q ss_pred             HHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCC
Q 013944          209 GLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVG  280 (433)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G  280 (433)
                                                    +.|+..+..+.+..    +-.+|++|..-....++|||+++.
T Consensus        80 ------------------------------~~E~~aL~~~~~~~----P~~VP~vy~~D~e~~~~vMEdL~~  117 (409)
T PRK12396         80 ------------------------------RIESDVLQLEEELA----PGLVPKVYLFDSVMNCCVMEDLSD  117 (409)
T ss_pred             ------------------------------HHHHHHHHHHHhhC----CCcCCeEEEECcHHhhHHHHhCcc
Confidence                                          23554444444433    224899997767777899999864

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.90  E-value=2.9e-05  Score=75.07  Aligned_cols=94  Identities=28%  Similarity=0.353  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 013944          138 RSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKR  217 (433)
Q Consensus       138 ~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~  217 (433)
                      |..+.+.|.+.+|.+..    -...++|+.|.+.++|+.. .+++.+-||+........+                    
T Consensus         2 w~~i~~~~~~~~~~~~~----i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~~f--------------------   56 (288)
T PF03881_consen    2 WQAIEQQISEQLGADFK----ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRDMF--------------------   56 (288)
T ss_dssp             HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCCHH--------------------
T ss_pred             hHHHHHHHHHHhCCCCc----eeeeEecCCCChhheEEEE-CCCccEEEEecChhhHHHH--------------------
Confidence            56778889999987621    1235689999999999987 5888999999874333332                    


Q ss_pred             cCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCC
Q 013944          218 KSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGE  281 (433)
Q Consensus       218 ~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~  281 (433)
                                           ..|+..+..+.+    ...+.||+|+..  ..+..+|+|||++.+
T Consensus        57 ---------------------~~Ea~gL~~L~~----~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   57 ---------------------EGEAEGLKALAE----ANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             ---------------------HHHHHHHHHHCH----TTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             ---------------------HHHHHHHHHHHh----cCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence                                 345556655533    256789999974  345669999999877

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=97.81  E-value=0.00049  Score=67.80  Aligned_cols=29  Identities=34%  Similarity=0.645  Sum_probs=26.1

Q ss_pred             ccccCCCCCceEEccCCc-EEEEecccccc
Q 013944          333 ILHADPHPGNLRYTSSGQ-IGFLDFGLLCR  361 (433)
Q Consensus       333 ivH~DlhpgNilv~~~g~-l~l~DFGl~~~  361 (433)
                      ++|+|+||+||+++.+.. ..++|||-++.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            999999999999998875 89999998764

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.80  E-value=3.3e-05  Score=75.71  Aligned_cols=74  Identities=18%  Similarity=0.213  Sum_probs=53.2

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc--
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT--  346 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~--  346 (433)
                      ...+|||...+ .+|..++......               .  +...++..|+..++.+||.+|+-|||+|.+|||+.  
T Consensus       316 ~tlylvMkrY~-~tLr~yl~~~~~s---------------~--r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~Eld  377 (598)
T KOG4158|consen  316 KTLYLVMKRYR-QTLREYLWTRHRS---------------Y--RTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELD  377 (598)
T ss_pred             ceEEEehhcch-hhHHHHHhcCCCc---------------h--HHHHHHHHHHHHHHHHHHHccchhhcccccceEEEec
Confidence            34588998776 5777776543211               1  11234555677899999999999999999999984  


Q ss_pred             cCC--cEEEEeccccc
Q 013944          347 SSG--QIGFLDFGLLC  360 (433)
Q Consensus       347 ~~g--~l~l~DFGl~~  360 (433)
                      +|+  .+++.|||++-
T Consensus       378 dD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  378 DDEIPQLVVADFGCCL  393 (598)
T ss_pred             CCCCcEEEEcccceee
Confidence            443  68999999863

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.79  E-value=0.00021  Score=69.61  Aligned_cols=35  Identities=20%  Similarity=0.263  Sum_probs=30.3

Q ss_pred             CCccccCCCCCceEEccC----CcEEEEecccccccCHH
Q 013944          331 TGILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERK  365 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~----g~l~l~DFGl~~~l~~~  365 (433)
                      .+++|+|+||+||+++++    +.+.++||..++.-.+.
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~  217 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRG  217 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcH
Confidence            468999999999999875    89999999998876653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.78  E-value=3.4e-05  Score=74.35  Aligned_cols=159  Identities=18%  Similarity=0.212  Sum_probs=97.4

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||-|-=+-||.+...+|++.++|+-|-|-..  -+.++.-|   .-   +..++ ...++.       ..-+.-..|
T Consensus        97 GnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtS--FR~Vk~kR---DY---~r~r~-~~sWly-------LSRlaa~kE  160 (465)
T KOG2268|consen   97 GNQIGVGKESDIYVVADEEGNPLILKLHRLGRTS--FRNVKNKR---DY---LRKRK-SGSWLY-------LSRLAATKE  160 (465)
T ss_pred             ccccccccccceEEEecCCCCchhHHHHhhhhhh--HHHhhhhh---hh---HhcCC-ccchhh-------hHHHHHHHH
Confidence            4568888889999999889999999986643211  00000000   00   00010 111110       001111334


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      -+.+..+.+     ..+.||+++.  .++.+.|||+++|.+|...-.....              ......        +
T Consensus       161 fafmkaL~e-----~gfpVPkpiD--~~RH~Vvmelv~g~Pl~~v~~v~d~--------------~~ly~~--------l  211 (465)
T KOG2268|consen  161 FAFMKALYE-----RGFPVPKPID--HNRHCVVMELVDGYPLRQVRHVEDP--------------PTLYDD--------L  211 (465)
T ss_pred             HHHHHHHHH-----cCCCCCCccc--ccceeeHHHhhcccceeeeeecCCh--------------HHHHHH--------H
Confidence            445555543     3467898886  4677999999999998876432210              011111        2


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ...+.-|-.+|++|+|-.-=||++..+++++++||-.+...+..
T Consensus       212 m~~Iv~la~~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~sh~  255 (465)
T KOG2268|consen  212 MGLIVRLANHGLIHGDFNEFNIMVKDDDKIVVIDFPQMVSTSHP  255 (465)
T ss_pred             HHHHHHHHHcCceecccchheeEEecCCCEEEeechHhhccCCC
Confidence            23455678999999999999999999999999999877666543

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.64  E-value=0.00044  Score=68.52  Aligned_cols=80  Identities=20%  Similarity=0.210  Sum_probs=51.0

Q ss_pred             cccccccceeEEEEecCC-CEEEEEEcCCCchh---hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          164 PVAAASFGQVYRGSTLDG-SIVAVKVQRPNLRH---VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       164 pigsgS~gqVy~a~l~~G-~~VAVKv~~p~~~~---~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .||-|...-||++...+| +.|+||.-.|-++.   ....++.  |                                -+
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~--R--------------------------------~~   47 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLD--R--------------------------------AR   47 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCcc--H--------------------------------HH
Confidence            478999999999997655 68999976654432   1111110  1                                02


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCC
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE  281 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~  281 (433)
                      .|+..+....+..    +-.+|++|..-....++|||+++..
T Consensus        48 ~E~~~L~~~~~~~----P~~vP~vy~~D~e~~~~vMEdL~~~   85 (370)
T TIGR01767        48 IESSALIRQGEHV----PHLVPRIFHFDTEMAVTVMEDLSHH   85 (370)
T ss_pred             HHHHHHHHhhccC----ccccCeEEEEccccceehHhhCccc
Confidence            3554444443322    2369999987777889999999653

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PRK06149 hypothetical protein; Provisional

Probab=97.54  E-value=0.0019  Score=72.95  Aligned_cols=59  Identities=12%  Similarity=0.165  Sum_probs=42.3

Q ss_pred             HHHHhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCc
Q 013944          126 LSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNL  193 (433)
Q Consensus       126 L~~lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~  193 (433)
                      +..+....|.++.+++.+++++.+|... +      ..+++++. -++|+.+..+ ..+++|+.++..
T Consensus         7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~~-~------~~~L~s~~-d~nf~v~t~~-~~yVLKi~~~~~   65 (972)
T PRK06149          7 IDRSSLPAPDVSEAQAERILAEHYGLSG-T------LTELGSQQ-DRNFRVDSDG-GRFVLKICHAAY   65 (972)
T ss_pred             hccCCCCCCCCCHHHHHHHHHHhcCCce-E------EEecCCcC-cceEEEEecC-CcEEEEeCCccC
Confidence            3445667888999999999999998641 1      24665444 4789887644 468889998754

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.52  E-value=0.0035  Score=60.41  Aligned_cols=39  Identities=23%  Similarity=0.480  Sum_probs=31.6

Q ss_pred             CCccccCCCCCceEEccCCcE-EEEecccccccCHHHHHH
Q 013944          331 TGILHADPHPGNLRYTSSGQI-GFLDFGLLCRMERKHQFA  369 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l-~l~DFGl~~~l~~~~~~~  369 (433)
                      ..++|+|+||+||++++++++ .++||+.+..-++..-.+
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa~Dla  224 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPARDFV  224 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHHHHHH
Confidence            358999999999999876664 699999998877755433

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.45  E-value=2.3e-05  Score=79.42  Aligned_cols=80  Identities=20%  Similarity=0.358  Sum_probs=58.2

Q ss_pred             eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc
Q 013944          271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ  350 (433)
Q Consensus       271 ~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~  350 (433)
                      .++.|+||+-.+|.+++.......         .....    +......++..++.|   .|.+|+|++|.||+...+++
T Consensus       331 lyI~Mn~c~~~tledWl~rr~~~e---------~~s~s----~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q  394 (516)
T KOG1033|consen  331 LYIQMNLCEKETLEDWLRRRRTGE---------ERSLS----LMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQ  394 (516)
T ss_pred             hhhhhhhhhhhhHHHHhhCCCccc---------ccchh----HHHHHHHhhccchhh---ccchhhhccccccccccchh
Confidence            489999999999999996432111         00011    112234455556666   99999999999999999999


Q ss_pred             EEEEecccccccCHHH
Q 013944          351 IGFLDFGLLCRMERKH  366 (433)
Q Consensus       351 l~l~DFGl~~~l~~~~  366 (433)
                      ++|.|||++.......
T Consensus       395 ~kIgDFgl~ts~~~~~  410 (516)
T KOG1033|consen  395 LKIGDFGLVTSQDKDE  410 (516)
T ss_pred             hhhhhhhheeecccCC
Confidence            9999999998876543

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=97.38  E-value=0.00026  Score=72.71  Aligned_cols=95  Identities=22%  Similarity=0.264  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .+.|+.+|.+.+-+.+             ..+.+.+||.-|+|.|.+....             .+.+  ..+...+.+-
T Consensus         5 ~h~n~~~f~g~~~~~~-------------~~~~i~~~c~rGsl~D~i~~~~-------------~~~d--~~F~~s~~rd   56 (484)
T KOG1023|consen    5 DHDNLNKFIGASVDGP-------------EMIVIWEYCSRGSLLDILSNED-------------IKLD--YFFILSFIRD   56 (484)
T ss_pred             chhhhhhheeeEecCC-------------ceEEEEeeecCccHHhHHhccc-------------cCcc--HHHHHHHHHH
Confidence            4568888877654333             3378899999999999987421             1111  1222345566


Q ss_pred             HHHHHHHHHHCCc-cccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLLETGI-LHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh~~gi-vH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++.|+|...+ +|+-+++.|++++....+|+.|||+.....
T Consensus        57 i~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   57 ISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             HHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhccccc
Confidence            7779999998765 999999999999999999999999988774

>PLN02236 choline kinase

Probab=97.38  E-value=0.0032  Score=62.74  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=29.6

Q ss_pred             CCccccCCCCCceEEcc-CCcEEEEecccccccCHH
Q 013944          331 TGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       331 ~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++|+|++++||++++ ++.+.++||..++.-++.
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~  235 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVA  235 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchH
Confidence            36899999999999986 478999999998866553

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.31  E-value=0.004  Score=57.57  Aligned_cols=96  Identities=19%  Similarity=0.221  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 013944          138 RSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKR  217 (433)
Q Consensus       138 ~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~  217 (433)
                      |..+-+.+.+.+|..  ++   .+.+++.-|.+-+.|+... +..++-||+........                     
T Consensus         2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d-g~~~~FvK~n~~~~~~~---------------------   54 (286)
T COG3001           2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD-GTDPFFVKCNQREQLSM---------------------   54 (286)
T ss_pred             hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec-CCcceEEEecchhhHHH---------------------
Confidence            556777788888876  32   2355676666666665542 45789999875332222                     


Q ss_pred             cCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcc
Q 013944          218 KSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPT  284 (433)
Q Consensus       218 ~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~  284 (433)
                                          |..|+..++.+.+    .+.+.||+|+..-+  +..+|||||++-+++.
T Consensus        55 --------------------f~AEa~gL~~la~----s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          55 --------------------FTAEADGLELLAR----SNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             --------------------HHHHHHHHHHHHh----cCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence                                3446666665543    35689999998655  5679999999987776

>PRK11768 serine/threonine protein kinase; Provisional

Probab=97.30  E-value=0.0037  Score=61.78  Aligned_cols=33  Identities=27%  Similarity=0.307  Sum_probs=27.0

Q ss_pred             HCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          330 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       330 ~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++|+|+||+||+++ + .+.++||+-++.=..
T Consensus       195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~g~~  227 (325)
T PRK11768        195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDARMGPA  227 (325)
T ss_pred             CccceecCCCchhcccc-C-CcEEEeCCCCCCCCH
Confidence            35789999999999994 4 688999998875443

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.30  E-value=0.0053  Score=56.09  Aligned_cols=158  Identities=16%  Similarity=0.236  Sum_probs=89.9

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      +..+||+|+-=.||.  .++....+|||.+|.....-...       ..+.+++.+. ...        +....      
T Consensus         5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~-------~~~~k~~~~~-~~~--------~~~~~------   60 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPF-------KRWLKRLRPK-SRY--------RQNRR------   60 (199)
T ss_pred             CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccc-------hhHHHhhccc-chh--------HHHHH------
Confidence            356899999877775  35778899999998761110000       0111111100 001        11222      


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCC--ceEEEeeccCC------CCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSR--KRVLTMEWMVG------ESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~--~~~LVmE~i~G------~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      |...-..+.. -.+..+..+|++|....|  ..-+|+|.+..      .+|.+++... +.              .    
T Consensus        61 E~~~y~~l~~-~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~--------------~----  120 (199)
T PF10707_consen   61 ELRYYKQLSL-RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG-GL--------------T----  120 (199)
T ss_pred             HHHHHHHHhh-ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC-Cc--------------c----
Confidence            3332222221 334456778888875443  44788887643      2344444211 11              1    


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC--C--cEEEEe-cccccccCH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS--G--QIGFLD-FGLLCRMER  364 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~--g--~l~l~D-FGl~~~l~~  364 (433)
                        .-+...+..+.+++.+++|+.+|++|+||++...  |  +++++| ||-...++-
T Consensus       121 --~~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~ipl  175 (199)
T PF10707_consen  121 --EELRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELIPL  175 (199)
T ss_pred             --HHHHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCcccccH
Confidence              1133445667889999999999999999999643  2  688998 466555443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.17  E-value=0.01  Score=57.88  Aligned_cols=32  Identities=19%  Similarity=0.197  Sum_probs=27.1

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+++|+|+|++|++++. +.+.++||+.+..-.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~~~  218 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTIDL  218 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccccCC
Confidence            58899999999999987 789999999765433

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=96.99  E-value=0.0013  Score=62.33  Aligned_cols=33  Identities=24%  Similarity=0.291  Sum_probs=28.4

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCch
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLR  194 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~  194 (433)
                      ..++..|+.+.|+.++..+|.++++|+..|...
T Consensus         7 ~~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~   39 (253)
T PF04655_consen    7 DGPPAHGSSSLVVPVRRADGTPAVLKLAPPHAE   39 (253)
T ss_pred             CCCCCCCcceEEEEEEcCCCCeEEEEecCCccc
Confidence            346788999999999999999999999988643

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.97  E-value=0.00011  Score=78.35  Aligned_cols=81  Identities=27%  Similarity=0.363  Sum_probs=61.8

Q ss_pred             CCceEEEeeccCCCCcchhhh-hcc-CCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCceE
Q 013944          268 SRKRVLTMEWMVGESPTDLIS-LST-GSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLL-ETGILHADPHPGNLR  344 (433)
Q Consensus       268 ~~~~~LVmE~i~G~~L~~~l~-~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh-~~givH~DlhpgNil  344 (433)
                      ....++.+|+.+|+++.+.+. ... +.+...                ......++..++.++| ..|+.|+|++|.|.+
T Consensus        93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~----------------~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~  156 (601)
T KOG0590|consen   93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSS----------------ASRYLPQLNSGLSYLHPENGVTHRDIKPSNSL  156 (601)
T ss_pred             CcccccccCcccccccccccccCCccCCCCcc----------------hhhhhhhhccCccccCcccccccCCCCCccch
Confidence            345589999999999888762 211 111000                0124455677999999 999999999999999


Q ss_pred             EccCC-cEEEEecccccccCH
Q 013944          345 YTSSG-QIGFLDFGLLCRMER  364 (433)
Q Consensus       345 v~~~g-~l~l~DFGl~~~l~~  364 (433)
                      ++..+ .+++.|||++..+..
T Consensus       157 l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen  157 LDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             hccCCCcccCCCchhhccccc
Confidence            99999 999999999998876

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.93  E-value=0.007  Score=59.93  Aligned_cols=33  Identities=30%  Similarity=0.415  Sum_probs=28.0

Q ss_pred             ccccCCCCCceEEcc-CCcEEEEecccccccCHH
Q 013944          333 ILHADPHPGNLRYTS-SGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       333 ivH~DlhpgNilv~~-~g~l~l~DFGl~~~l~~~  365 (433)
                      +.|.|++|+||++++ ++++.++||..++.-++-
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~  217 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRG  217 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccCCCccH
Confidence            799999999999975 478999999988765543

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=96.85  E-value=0.0075  Score=63.34  Aligned_cols=89  Identities=12%  Similarity=0.069  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      .|.|+.++.+.+....             ..|||+|.+.  +|..++....                   .....+...+
T Consensus        67 RHP~Il~yL~t~e~~~-------------~~ylvTErV~--Pl~~~lk~l~-------------------~~~v~~Gl~q  112 (690)
T KOG1243|consen   67 RHPNILSYLDTTEEEG-------------TLYLVTERVR--PLETVLKELG-------------------KEEVCLGLFQ  112 (690)
T ss_pred             cCchhhhhhhhhcccC-------------ceEEEeeccc--cHHHHHHHhH-------------------HHHHHHHHHH
Confidence            4556666665554333             4499999884  5665554211                   1222345667


Q ss_pred             HHHHHHHHH-HCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          321 VEATLVQLL-ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       321 i~~~l~~lh-~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      |.++|.+|| +.+++|+.+.-+.|+|+..|+.+|.+|-.+...+
T Consensus       113 Il~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~  156 (690)
T KOG1243|consen  113 ILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS  156 (690)
T ss_pred             HHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence            888999997 6799999999999999999999999998876543

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.64  E-value=0.013  Score=59.94  Aligned_cols=180  Identities=13%  Similarity=0.130  Sum_probs=107.2

Q ss_pred             ceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHH
Q 013944          171 GQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQ  249 (433)
Q Consensus       171 gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~  249 (433)
                      ...|+|.. .||..+++|..+-+-......|..+..    ..+                          ..-+.|++.|+
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve----~wk--------------------------kl~h~NvV~fr  339 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVE----AWK--------------------------KLCHTNVVPFR  339 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHH----HHH--------------------------HhccCceeehh
Confidence            35688884 599999999774322222112221111    111                          12344777777


Q ss_pred             HhcCCCCCeEeceeecccCCceEEEeeccCCC-CcchhhhhccCCC-CCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 013944          250 ESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGE-SPTDLISLSTGSS-VDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQ  327 (433)
Q Consensus       250 ~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~-~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~  327 (433)
                      +.|....         -.....+||++|.++. +|.++--...... ..... .+........+.+|. +..|+.++|..
T Consensus       340 evf~t~t---------F~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~-~~~~~~~~~e~~lW~-y~~QLtaaL~s  408 (655)
T KOG3741|consen  340 EVFLTYT---------FGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSF-YPSQNLKAPEEVLWS-YISQLTAALYS  408 (655)
T ss_pred             hhhhhhc---------cCcceEEEEEecCCCCchHHHHHccCCccccccccc-cccCCCCchHHHHHH-HHHHHHHHHHH
Confidence            7664211         1124459999999864 5555433221111 00000 011111112233443 45678889999


Q ss_pred             HHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCC
Q 013944          328 LLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       328 lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                      +|+.|+--.-+.|.+|+++.+.+++|.-.|.+..+..+.    ...+...-+.|...++..+..+...
T Consensus       409 IHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~----~~~le~~Qq~D~~~lG~ll~aLAt~  472 (655)
T KOG3741|consen  409 IHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP----TEPLESQQQNDLRDLGLLLLALATG  472 (655)
T ss_pred             HHhcCceeecccHhHeEeeCcceEEEecccceeeecCCC----CcchhHHhhhhHHHHHHHHHHHhhc
Confidence            999999999999999999988899999999988776544    2233345567888888888777655

>PRK10271 thiK thiamine kinase; Provisional

Probab=96.25  E-value=0.0055  Score=55.27  Aligned_cols=34  Identities=29%  Similarity=0.424  Sum_probs=29.1

Q ss_pred             CccccCCCCCceEEccCCcEEEEecccccccCHHH
Q 013944          332 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       332 givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~  366 (433)
                      -.+|+|+||+|++++++| ++++||+.++.-++..
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~~  111 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIAL  111 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccCCCHHH
Confidence            458999999999997766 9999999998877754

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.13  E-value=0.02  Score=51.82  Aligned_cols=91  Identities=14%  Similarity=0.157  Sum_probs=57.4

Q ss_pred             EeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH---CCccc
Q 013944          259 HVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE---TGILH  335 (433)
Q Consensus       259 ~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~---~givH  335 (433)
                      .+|+++...  .+++++||+..+++...-.     +..+..      ...|..+.  -++.++...+.+++.   ..+.-
T Consensus        21 ~~pk~lG~C--G~~~v~E~~~~~~~~~~~~-----~l~~~~------~~~w~~R~--~iA~~lL~~l~~l~~~~~~~~~l   85 (188)
T PF12260_consen   21 PFPKLLGSC--GRFYVVEYVGAGSLYGIYR-----PLSQFL------QSPWEQRA--KIALQLLELLEELDHGPLGFFYL   85 (188)
T ss_pred             CCCCeeeEC--CCEEEEEeecCcccccccc-----cccccc------ccCHHHHH--HHHHHHHHHHHHHhcCCCCcEEE
Confidence            789998753  3378999998765532100     000000      00122221  144445556666765   45777


Q ss_pred             cCCCCCceEEccCCcEEEEecccccccCH
Q 013944          336 ADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       336 ~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +|.+|+|+-++.+|+++++|...+...+.
T Consensus        86 cDv~~~nfgv~~~~~lk~iDld~v~~~~~  114 (188)
T PF12260_consen   86 CDVSPDNFGVNDDGRLKLIDLDDVFVEDK  114 (188)
T ss_pred             eecchHHeEEeCCCcEEEEechhcchhHH
Confidence            99999999999999999999998766544

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=95.77  E-value=0.0077  Score=62.25  Aligned_cols=142  Identities=20%  Similarity=0.190  Sum_probs=86.7

Q ss_pred             ccccccccceeEEEEe--cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          163 EPVAAASFGQVYRGST--LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l--~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..|+.+.|+.|+....  .++..+++|-...++.. ...|+.-+....                               .
T Consensus       271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~-~~~di~sl~ev~-------------------------------l  318 (524)
T KOG0601|consen  271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT-FASDIFSLGEVI-------------------------------L  318 (524)
T ss_pred             EEccCCccccceeeeecCCCCceEeChhhhccccc-hHhhhcchhhhh-------------------------------H
Confidence            4799999999998763  36788899876655443 234443333110                               0


Q ss_pred             HHHHHHHHHHhcCCCCCeEece--eecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPK--VFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~--v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |+.-     .     -+..++.  .-|..-...++--|||+|++.........-.+        +.      ..+  .+.
T Consensus       319 ~~~l-----~-----~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d--------~~------~~~--~~~  372 (524)
T KOG0601|consen  319 EAIL-----G-----SHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLD--------ED------PRL--RLT  372 (524)
T ss_pred             hhHh-----h-----cccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcC--------cc------hhh--hhH
Confidence            1000     0     0011112  12333355578999999988765543211111        11      111  133


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccC-CcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l  362 (433)
                      .++..++..+|+..++|.|++|.||++..+ +..++.|||+...+
T Consensus       373 ~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~  417 (524)
T KOG0601|consen  373 AQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL  417 (524)
T ss_pred             HHHHhccccccchhhhcccccccceeeccchhhhhcccccccccc
Confidence            345678999999999999999999999876 77888999987653

>PTZ00384 choline kinase; Provisional

Probab=95.75  E-value=0.19  Score=50.83  Aligned_cols=30  Identities=23%  Similarity=0.154  Sum_probs=25.2

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      ..+.|.|++++||+.+ ++.+.++||-.++.
T Consensus       227 ~VfCHNDL~~gNIL~~-~~~l~lID~EYA~~  256 (383)
T PTZ00384        227 VLFCHNDLFFTNILDF-NQGIYFIDFDFAGF  256 (383)
T ss_pred             eeeeeccCCcccEEec-CCCEEEEEeccccC
Confidence            5789999999999874 56799999987664

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=95.52  E-value=0.22  Score=45.58  Aligned_cols=33  Identities=33%  Similarity=0.465  Sum_probs=26.8

Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccc
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLL  359 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~  359 (433)
                      ..-+..+|..||+-+|+++.|..   +|  +|+|||.+
T Consensus       174 ~~dl~~~~k~gI~~~Dv~~~ny~---~G--~lvDfs~~  206 (207)
T PF13095_consen  174 LRDLKILHKLGIVPRDVKPRNYR---GG--KLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHCCeeeccCcccccc---CC--EEEecccC
Confidence            34567799999999999999997   34  67899864

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=95.50  E-value=0.0067  Score=62.70  Aligned_cols=42  Identities=31%  Similarity=0.502  Sum_probs=38.4

Q ss_pred             HHHHHHHCCccccCCCCCceEEccC-CcEEEEecccccccCHH
Q 013944          324 TLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERK  365 (433)
Q Consensus       324 ~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l~~~  365 (433)
                      ++.++|..+++|-|++|.|++...+ ...++.|||++..+.+.
T Consensus       234 al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~  276 (524)
T KOG0601|consen  234 ALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDG  276 (524)
T ss_pred             cccccCCCcccccccchhheecccccceeecCCcceeEEccCC
Confidence            8899999999999999999999999 78889999999888654

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=95.46  E-value=0.064  Score=52.11  Aligned_cols=95  Identities=15%  Similarity=0.182  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ...|.|+.+|..++.+...-.+|++        +...||++.+++..+++..+..            .......-++-..
T Consensus       123 qlvHsnlvkfH~yw~d~K~~e~~rv--------iFiteymssgs~~~fLkrt~~~------------~~a~~~~~wkkw~  182 (458)
T KOG1266|consen  123 QLVHSNLVKFHKYWTDKKYEEKPRV--------IFITEYMSSGSLKQFLKRTKKN------------QKALFQKAWKKWC  182 (458)
T ss_pred             HHHHHHHHHHHHhhcccccccccce--------EEEEecccchhHHHHHHHHHHh------------hhhhhHHHHHHHH
Confidence            3478899999998877665444444        6789999999999998753211            1111122223355


Q ss_pred             HHHHHHHHHHHHC--CccccCCCCCceEEccCCcEEE
Q 013944          319 KGVEATLVQLLET--GILHADPHPGNLRYTSSGQIGF  353 (433)
Q Consensus       319 ~~i~~~l~~lh~~--givH~DlhpgNilv~~~g~l~l  353 (433)
                      .+|..+|.|||..  .++|+.+.-.-+++.++|-+++
T Consensus       183 tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIki  219 (458)
T KOG1266|consen  183 TQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKI  219 (458)
T ss_pred             HHHHhhhhhhhccCCccccCCcchhheeecCCceEEe
Confidence            6788999999986  6999999999999998887764

>PTZ00296 choline kinase; Provisional

Probab=95.45  E-value=0.34  Score=49.94  Aligned_cols=33  Identities=18%  Similarity=0.111  Sum_probs=26.0

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+.|.|+.++||+.+. +.+.++||-.++.-.+
T Consensus       284 ~VfCHNDl~~~NiL~~~-~~l~LIDfEYAg~ndp  316 (442)
T PTZ00296        284 IVFCHNDLQENNIINTN-KCLRLIDFEYSGYNFL  316 (442)
T ss_pred             eeEEeCCCCccceeecC-CCEEEEeecccccccH
Confidence            35899999999998754 4599999987764433

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=94.92  E-value=0.022  Score=55.80  Aligned_cols=39  Identities=28%  Similarity=0.413  Sum_probs=33.3

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccCHHHHHH
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFA  369 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~  369 (433)
                      ..++|+|.|+||+++++++.+.++||+++..=++..-..
T Consensus       198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~~Dl~  236 (321)
T COG3173         198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPLEDLA  236 (321)
T ss_pred             ceeeeCCcccCCEEEeCCCeeEEEeccccccCCcHHHHH
Confidence            468999999999999999999999999998777654433

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=93.99  E-value=0.028  Score=51.63  Aligned_cols=34  Identities=26%  Similarity=0.485  Sum_probs=24.3

Q ss_pred             CCccccCCCCCceEE-ccCCcEEEEecccccccCH
Q 013944          331 TGILHADPHPGNLRY-TSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       331 ~givH~DlhpgNilv-~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+.|.|++|+||++ +.+++++++||-.++.-..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~  177 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDR  177 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EEEEH
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhhccc
Confidence            468999999999999 8889999999999886655

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=93.96  E-value=0.33  Score=48.18  Aligned_cols=29  Identities=21%  Similarity=0.295  Sum_probs=26.8

Q ss_pred             CCccccCCCCCceEEccCCcEEEEeccccc
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLC  360 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~  360 (433)
                      ..+=|+|++-+||+++ +|.|.|+||-+++
T Consensus       341 f~fehrnlt~~niLId-~GnvtLIDfklsR  369 (488)
T COG5072         341 FPFEHRNLTLDNILID-EGNVTLIDFKLSR  369 (488)
T ss_pred             CCcccccccccceeee-cCceEEEEeeeee
Confidence            3678999999999998 9999999999987

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=93.18  E-value=0.1  Score=47.44  Aligned_cols=37  Identities=16%  Similarity=0.230  Sum_probs=30.5

Q ss_pred             HCCccccCCCCCceEEccCC-----cEEEEecccccccCHHH
Q 013944          330 ETGILHADPHPGNLRYTSSG-----QIGFLDFGLLCRMERKH  366 (433)
Q Consensus       330 ~~givH~DlhpgNilv~~~g-----~l~l~DFGl~~~l~~~~  366 (433)
                      ...++|+|++++|+++..++     .+.++||..++.-++..
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~  160 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAE  160 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHH
Confidence            35789999999999998654     69999999988777643

subfamily of choline kinases

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.08  E-value=0.071  Score=51.14  Aligned_cols=33  Identities=27%  Similarity=0.350  Sum_probs=29.0

Q ss_pred             CccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          332 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       332 givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      -++|+|++|+|++.+++|++.|+||--++.=++
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~  186 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDP  186 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEecccCCCccH
Confidence            589999999999999999999999987765544

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=92.96  E-value=0.21  Score=48.29  Aligned_cols=33  Identities=21%  Similarity=0.312  Sum_probs=27.3

Q ss_pred             CccccCCCCCceEEccC--C---cEEEEecccccccCH
Q 013944          332 GILHADPHPGNLRYTSS--G---QIGFLDFGLLCRMER  364 (433)
Q Consensus       332 givH~DlhpgNilv~~~--g---~l~l~DFGl~~~l~~  364 (433)
                      -++|+|+|++|||+..+  |   .++++||-+++.-++
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p  253 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSP  253 (294)
T ss_pred             EEEcCccCHHhEeEccccccccccceeeccccccCCCc
Confidence            47999999999999765  3   699999998876544

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=91.29  E-value=0.11  Score=50.77  Aligned_cols=34  Identities=15%  Similarity=0.167  Sum_probs=29.5

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .|++|+|++++|+++++++.+.++||-.+..=.+
T Consensus       196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d~~  229 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDETRGGYFINFEKASFASP  229 (309)
T ss_pred             eeeeCCCCcHHhEEEcCCCCEEEEEhhhcccCCc
Confidence            3899999999999999999999999988765443

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	433
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	3e-05
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	5e-05
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	9e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 67/413 (16%), Positives = 112/413 (27%), Gaps = 100/413 (24%)

Query: 79  DFDGNISQYNFGMILKETVLNLGPTFIK----------VGQSLSTR--PDIIGS-DISKA 125
           DF+    QY +  IL          F+               LS      II S D    
Sbjct: 8   DFETGEHQYQYKDILSVFE----DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63

Query: 126 LSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVY---RGSTLDGS 182
              L   +      +  K +EE L    +   S I  E    +   ++Y   R    + +
Sbjct: 64  TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123

Query: 183 IVAVK--VQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL 240
            V  K  V R      + + +  LR    +L           +     G    G+    L
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVL-----------ID----GVLGSGKTWVAL 168

Query: 241 EAANASEFQESHSPFPFIHVPKVF-----RYLSRKRVLTM----------EWMVGESPTD 285
           +   + + Q       F    K+F        S + VL M           W      + 
Sbjct: 169 DVCLSYKVQCK---MDF----KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS 221

Query: 286 LISLSTGSSVDGSSTHLDRQK-------LDAKW--RLLD--------LV---NKGVEATL 325
            I L   S        L  +        L      +  +        L+    K V    
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV-TDF 280

Query: 326 VQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER-KHQ--------FAMLASIVH 376
           +    T  +  D H   L       +  L + L CR +    +         +++A  + 
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSL-LLKY-LDCRPQDLPREVLTTNPRRLSIIAESIR 338

Query: 377 IVNGDWQSLVHSLTEMDVVRPGTNTLRVTMD-LEDALGEVEFKD-GI--PDVK 425
                W +  H   +       T  +  +++ LE A     F    +  P   
Sbjct: 339 DGLATWDNWKHVNCD-----KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 4e-05
 Identities = 69/563 (12%), Positives = 145/563 (25%), Gaps = 192/563 (34%)

Query: 12  NYFYH-MLKIWSKPLPEVYNPQDVADYFNCRP--------HIVGLRLLEVGSCFLSAVIR 62
            Y Y  +L ++     + ++ +DV D    +         HI+  +    G+  L   + 
Sbjct: 15  QYQYKDILSVFEDAFVDNFDCKDVQDMP--KSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72

Query: 63  IRTSRI-RKFLRSDLEKDFD--------------GNISQYNFGMILKETVLNLGPTFIK- 106
            +   + +KF+   L  ++                    Y      ++ + N    F K 
Sbjct: 73  SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE---QRDRLYNDNQVFAKY 129

Query: 107 -VGQSLSTRPDIIGSDISKALSEL--------------------------HDQIPPFPRS 139
            V     +R       + +AL EL                          +         
Sbjct: 130 NV-----SRLQPY-LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183

Query: 140 IA-MKI----IEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGS-----IVAVKVQ 189
           I  + +      E +   ++     I     + +      +            ++  K  
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK-P 242

Query: 190 RPN----LRHV----VV-------------RDIYILRI---------------------- 206
             N    L +V                   R   +                         
Sbjct: 243 YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 207 GLGLLQKIAK-RKSDLRLYADE---LGKGLVGEL--------DY---------------T 239
              LL K    R  DL             ++ E         D                +
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 240 LEAANASEFQ---ESHSPFPF-IHVPKVFRYLSRKRVLTMEW--MVGESPTDLISLSTGS 293
           L     +E++   +  S FP   H+P          +L++ W  ++      +++     
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIP--------TILLSLIWFDVIKSDVMVVVNKLHKY 414

Query: 294 SVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHA---DPHPGNLRYTSSGQ 350
           S+      +++Q  ++   +  +  +      V+L     LH    D +     + S   
Sbjct: 415 SL------VEKQPKESTISIPSIYLE----LKVKLENEYALHRSIVDHYNIPKTFDSDDL 464

Query: 351 IGFLDFGL--------LCRMERKHQFAMLASIVHIVNGDW--QSLVHSLTEMDVVRPGTN 400
           I               L  +E   +  +   +   ++  +  Q + H  T  +      N
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV--FLDFRFLEQKIRHDSTAWNASGSILN 522

Query: 401 TLRVTMDLEDALGEVEFKDGIPD 423
           TL     L+       +K  I D
Sbjct: 523 TL---QQLK------FYKPYICD 536

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 43.0 bits (100), Expect = 3e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 212 QKIAKRKSDLRLYADELGKGLVGELDYTLE 241
           Q + K ++ L+LYAD+    L   +  T+E
Sbjct: 20  QALKKLQASLKLYADDSAPALA--IKATME 47

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* Length = 339

 Score = 43.9 bits (103), Expect = 5e-05
 Identities = 14/72 (19%), Positives = 26/72 (36%)

Query: 302 LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR 361
              Q   A  RL+D   K  +     L +  + H+D H GN+   +   I  +D+     
Sbjct: 177 FFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236

Query: 362 MERKHQFAMLAS 373
             ++     +  
Sbjct: 237 APKERDLMFIGG 248

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 Length = 328

 Score = 40.1 bits (93), Expect = 9e-04
 Identities = 12/59 (20%), Positives = 18/59 (30%), Gaps = 2/59 (3%)

Query: 312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAM 370
           +  D +   V A   +      LH D H GN+ +       F+D              M
Sbjct: 176 KATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR--DGPMFVDLDDARNGPAVQDLWM 232

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	433
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.95
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.93
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.92
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.92
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.92
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.91
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.91
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.91
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.91
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.9
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.9
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.9
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.89
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.88
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.87
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.87
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.87
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.87
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.87
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.85
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.83
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.82
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.82
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.82
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.81
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.81
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.81
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.8
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.8
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.8
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.8
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.8
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.8
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.79
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.79
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.79
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.79
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.79
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.79
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.79
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.79
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.79
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.78
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.78
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.78
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.78
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.78
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.78
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.78
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.78
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.78
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.78
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.78
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.78
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.77
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.77
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.77
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.77
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.77
3niz_A	311	Rhodanese family protein; structural genomics, str	99.77
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.77
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.77
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.77
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.77
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.77
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.77
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.77
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.77
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.77
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.76
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.76
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.76
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.76
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.76
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.76
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.76
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.76
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.76
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.76
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.76
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.76
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.76
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.76
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.75
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.75
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.75
3bhy_A	283	Death-associated protein kinase 3; death associate	99.75
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.75
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.75
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.75
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.75
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.75
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.75
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.75
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.75
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.75
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.75
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.75
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.75
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.75
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.75
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.75
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.75
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.75
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.75
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.75
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.74
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.74
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.74
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.74
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.74
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.74
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.74
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.74
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.74
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.74
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.74
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.74
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.74
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.74
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.74
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.74
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.74
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.74
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.74
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.74
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.74
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.74
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.74
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.74
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.74
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.74
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.74
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.73
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.73
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.73
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.73
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.73
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.73
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.73
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.73
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.73
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.73
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.73
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.73
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.73
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.73
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.73
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.73
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.73
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.73
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.73
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.73
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.73
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.73
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.73
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.73
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.73
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.73
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.73
3uqc_A	286	Probable conserved transmembrane protein; structur	99.73
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.73
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.73
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.72
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.72
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.72
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.72
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.72
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.72
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.72
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.72
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.72
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.72
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.72
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.72
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.72
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.72
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.72
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.72
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.72
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.72
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.72
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.72
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.72
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.72
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.72
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.72
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.71
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.71
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.71
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.71
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.71
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.71
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.71
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.71
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.71
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.71
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.7
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.7
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.7
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.7
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.7
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.7
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.7
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.7
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.7
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.7
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.69
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.69
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.69
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.69
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.69
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.69
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.69
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.69
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.69
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.69
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.69
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.69
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.69
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.68
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.68
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.68
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.68
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.68
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.68
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.68
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.68
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.67
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.67
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.67
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.67
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.67
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.66
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.66
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.66
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.66
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.66
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.66
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.66
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.66
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.66
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.66
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.65
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.65
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.65
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.65
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.65
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.65
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.64
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.64
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.6
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.6
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.33
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.19
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.09
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	99.05
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.81
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.77
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.76
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.74
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.73
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.6
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.57
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.57
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.48
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.32
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	98.3
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	98.29
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	98.26
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.24
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	98.16
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	98.11
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	98.02
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.89
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.86
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.65
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	97.39
3mes_A	424	Choline kinase; malaria, structural genomics, stru	97.15
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.59

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.95  E-value=7.6e-29  Score=246.86  Aligned_cols=229  Identities=17%  Similarity=0.134  Sum_probs=119.9

Q ss_pred             ccchHHHHHHHHHHhcChHHH-HHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCChhhhccccCC-
Q 013944           85 SQYNFGMILKETVLNLGPTFI-KVGQSLSTRPDIIGSDISKALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISE-  162 (433)
Q Consensus        85 ~~~~~~~~l~~~l~~lg~~~i-K~gQ~ls~r~dllp~~~~~~L~~lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~-  162 (433)
                      .+.++|+++.+.+.++++.++ +++|.+...++..+ +++.+++++|+.+|+.+...+.+.++.+++.+....+..+.. 
T Consensus        17 ~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (365)
T 2y7j_A           17 KERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSA-NLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQK   95 (365)
T ss_dssp             ------------------------------------------------------------------CBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCccchhcccccccccccCCCchhH-HHHHHHHhhhhcCCCCccccccccCCchhhcccchhhhhhhhh
Confidence            344667889999999999998 89999998887654 466789999999999999999999999999888777765555 


Q ss_pred             ----ccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          163 ----EPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       163 ----~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                          ++||+|++|+||+|+.+ +|+.||||+++++.......+..                        ++...+..|  
T Consensus        96 y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~------------------------~~~~~~~~E--  149 (365)
T 2y7j_A           96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLE------------------------EVREATRRE--  149 (365)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHH------------------------HHHHHHHHH--
T ss_pred             cccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHH------------------------HHHHHHHHH--
Confidence                89999999999999974 89999999998765432222211                        111222222  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                          ...+.++    .+++++..+..+...++..+|||||++|++|.+++.....++        +.        ....+
T Consensus       150 ----~~~l~~l----~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~--------~~--------~~~~i  205 (365)
T 2y7j_A          150 ----THILRQV----AGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALS--------EK--------ETRSI  205 (365)
T ss_dssp             ----HHHHHHH----TTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCC--------HH--------HHHHH
T ss_pred             ----HHHHHHh----cCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCC--------HH--------HHHHH
Confidence                2222222    245566556666667788999999999999999987543322        11        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..+|.+||+.|++|+|+||+||+++.+|+++|+|||++..+..
T Consensus       206 ~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~  252 (365)
T 2y7j_A          206 MRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP  252 (365)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence            66788899999999999999999999999999999999999987754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.93  E-value=1.8e-27  Score=234.57  Aligned_cols=151  Identities=17%  Similarity=0.174  Sum_probs=99.3

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+++......  .+...+                                 
T Consensus        26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~--~~~~~~---------------------------------   70 (350)
T 4b9d_A           26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS--KEREES---------------------------------   70 (350)
T ss_dssp             EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH--HHHHHH---------------------------------
T ss_pred             eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH--HHHHHH---------------------------------
Confidence            33456899999999999995 589999999986532211  111111                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       .+|++.+.++    . +++  |.+++..  ..+..+||||||+|++|.+++...++..      +++.+        ..
T Consensus        71 -~~E~~il~~l----~-Hpn--IV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~------~~e~~--------~~  128 (350)
T 4b9d_A           71 -RREVAVLANM----K-HPN--IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL------FQEDQ--------IL  128 (350)
T ss_dssp             -HHHHHHHHHC----C-CTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCC------CCHHH--------HH
T ss_pred             -HHHHHHHHHC----C-CCC--CCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCC------CCHHH--------HH
Confidence             2233333222    2 222  2233332  2356799999999999999987543321      11211        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~  366 (433)
                      .+..+++.+|.|||+.||+|||+||+|||++.+|.+||+|||+++.+....
T Consensus       129 ~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          129 DWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV  179 (350)
T ss_dssp             HHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence            356778899999999999999999999999999999999999999987653

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.92  E-value=5.6e-27  Score=227.36  Aligned_cols=181  Identities=15%  Similarity=0.125  Sum_probs=118.9

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |.-.+.||+|+||+||+|+. .+|+.||||+++...... ......                                  
T Consensus        34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~-~~~~~~----------------------------------   78 (311)
T 4aw0_A           34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPY----------------------------------   78 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHH----------------------------------
T ss_pred             cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC-HHHHHH----------------------------------
Confidence            33457899999999999995 589999999985321000 000000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +.+|.+.+.    .+   .+-+|.+++..+  ....+||||||+||+|.+++...+.++        +.        ...
T Consensus        79 ~~~E~~il~----~l---~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~--------e~--------~~~  135 (311)
T 4aw0_A           79 VTRERDVMS----RL---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--------ET--------CTR  135 (311)
T ss_dssp             HHHHHHHHT----TC---CCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCC--------HH--------HHH
T ss_pred             HHHHHHHHH----hC---CCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCC--------HH--------HHH
Confidence            122222221    12   122233444332  355699999999999999997654433        21        223


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH---------------HHHHHHHHHHHhc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------------FAMLASIVHIVNG  380 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------------~~~~~~~~~~~~~  380 (433)
                      .+..+++.+|.|||++||+|||+||+|||++.+|.+||+|||+++.+.....               +.++..-.+....
T Consensus       136 ~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~  215 (311)
T 4aw0_A          136 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS  215 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHH
Confidence            4677889999999999999999999999999999999999999987753321               1222111112345


Q ss_pred             CHHHHHHHHHhcCCCCC
Q 013944          381 DWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       381 d~~~~~~~l~~~g~~~~  397 (433)
                      |+|+++..+++|-...+
T Consensus       216 DiWSlGvilyeml~G~~  232 (311)
T 4aw0_A          216 DLWALGCIIYQLVAGLP  232 (311)
T ss_dssp             HHHHHHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHHHhCCC
Confidence            88888888888744433

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.92  E-value=5.8e-27  Score=230.57  Aligned_cols=138  Identities=21%  Similarity=0.352  Sum_probs=99.1

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCC---chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPN---LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~---~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|+||+||+|+. .+|+.||||+++..   ..+.+.+|+.+|+                                
T Consensus        79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~--------------------------------  126 (346)
T 4fih_A           79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR--------------------------------  126 (346)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHH--------------------------------
T ss_pred             eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHH--------------------------------
Confidence            45799999999999996 58999999987521   1222222332222                                


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                               +    +. +++  |.+++..  .....+||||||+|++|.+++... +++        +.        ...
T Consensus       127 ---------~----l~-Hpn--IV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~-~l~--------e~--------~~~  173 (346)
T 4fih_A          127 ---------D----YQ-HEN--VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMN--------EE--------QIA  173 (346)
T ss_dssp             ---------H----CC-CTT--BCCEEEEEEETTEEEEEECCCTTEEHHHHHHHS-CCC--------HH--------HHH
T ss_pred             ---------h----CC-CCC--CCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcC-CCC--------HH--------HHH
Confidence                     1    21 122  2333332  235679999999999999988642 222        21        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..+++.+|.|||+.||+|||+||+|||++.+|.+||+|||+++.+..
T Consensus       174 ~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  222 (346)
T 4fih_A          174 AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  222 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence            4667788999999999999999999999999999999999999987754

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.92  E-value=3.4e-26  Score=218.61  Aligned_cols=193  Identities=17%  Similarity=0.156  Sum_probs=110.9

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |.-.+.||+|+||+||+|+. .+|+.||||+++......-. ...                                  .
T Consensus        15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~----------------------------------~   59 (275)
T 3hyh_A           15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-MQG----------------------------------R   59 (275)
T ss_dssp             CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHH----------------------------------H
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHH-HHH----------------------------------H
Confidence            44457899999999999995 58999999998653221100 000                                  0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +.+|...+.+    +. +++  |.+++..  .....+|||||| |++|.+++.....++        +.        ...
T Consensus        60 ~~~Ei~il~~----l~-Hpn--Iv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~--------e~--------~~~  115 (275)
T 3hyh_A           60 IEREISYLRL----LR-HPH--IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMS--------EQ--------EAR  115 (275)
T ss_dssp             HHHHHHHHHH----CC-CTT--BCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCC--------HH--------HHH
T ss_pred             HHHHHHHHHH----CC-CCC--CCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCC--------HH--------HHH
Confidence            1223332222    22 222  2333332  235669999999 568888886544332        21        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHH-hcCC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLT-EMDV  394 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~-~~g~  394 (433)
                      .+..+++.++.|+|++||+|||+||+|||++.+|.+||+|||+++...+....   ....    +....++..+. ..+.
T Consensus       116 ~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~---~~~~----GT~~Y~APE~~~~~~y  188 (275)
T 3hyh_A          116 RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL---KTSC----GSPNYAAPEVISGKLY  188 (275)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC----------------------CTTSCHHHHSSSSC
T ss_pred             HHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCcc---CCee----ECcccCChhhhcCCCC
Confidence            46678899999999999999999999999999999999999999877654321   1111    22222333332 2333


Q ss_pred             CCCCCChHHHHHHHHHHh-hchhc
Q 013944          395 VRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      ..+.+|+|+++-.+++++ |..+|
T Consensus       189 ~~~~~DiwSlGvily~lltg~~PF  212 (275)
T 3hyh_A          189 AGPEVDVWSCGVILYVMLCRRLPF  212 (275)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCChhhhHHHHHHHHHHHHCCCCC
Confidence            345566776666666555 44444

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.92  E-value=6.1e-27  Score=229.66  Aligned_cols=190  Identities=18%  Similarity=0.135  Sum_probs=122.6

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+++.....  .+                                         
T Consensus        63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--~~-----------------------------------------   99 (336)
T 4g3f_A           63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--VE-----------------------------------------   99 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--TH-----------------------------------------
T ss_pred             CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--HH-----------------------------------------
Confidence            45799999999999996 58999999998643211  11                                         


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...       ++...+-+|.++|..+  ....+||||||+|++|.+++.....++        +.        ....+.
T Consensus       100 E~~i-------l~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~--------e~--------~~~~~~  156 (336)
T 4g3f_A          100 ELVA-------CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP--------ED--------RALYYL  156 (336)
T ss_dssp             HHHT-------TTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCC--------HH--------HHHHHH
T ss_pred             HHHH-------HHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCC--------HH--------HHHHHH
Confidence            2111       1111222233444332  345699999999999999997654333        11        123466


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCC-cEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g-~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~  397 (433)
                      .+++.+|.|||++||+|||+||+|||++.+| ++||+|||+++.+.+.....-.. ....+.+....++..++.-.....
T Consensus       157 ~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~  235 (336)
T 4g3f_A          157 GQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL-TGDYIPGTETHMAPEVVMGKPCDA  235 (336)
T ss_dssp             HHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------------CCCCCCGGGCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee-cCCccccCccccCHHHHCCCCCCc
Confidence            7888999999999999999999999999988 69999999999886543211000 000112344455555554444566


Q ss_pred             CCChHHHHHHHHHHh-hchhcc
Q 013944          398 GTNTLRVTMDLEDAL-GEVEFK  418 (433)
Q Consensus       398 ~~d~~~~~~~l~~~l-~~~~~~  418 (433)
                      .+|+|+++-.+++++ |..+|.
T Consensus       236 ~~DiwSlGvilyemltG~~Pf~  257 (336)
T 4g3f_A          236 KVDIWSSCCMMLHMLNGCHPWT  257 (336)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSST
T ss_pred             HHHHHHHHHHHHHHHHCcCCCC
Confidence            677887777777666 555553

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.92  E-value=9.8e-27  Score=234.50  Aligned_cols=139  Identities=21%  Similarity=0.360  Sum_probs=100.2

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCC---chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPN---LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~---~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+++..   ..+.+.+|+.+|+                               
T Consensus       155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~-------------------------------  203 (423)
T 4fie_A          155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMR-------------------------------  203 (423)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHH-------------------------------
T ss_pred             eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHH-------------------------------
Confidence            346799999999999996 58999999987532   2223333333333                               


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                                +    +.+ +  +|.++|..  .....+||||||+|++|.+++... +++        +.        ..
T Consensus       204 ----------~----l~H-p--nIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~-~l~--------e~--------~~  249 (423)
T 4fie_A          204 ----------D----YQH-E--NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT-RMN--------EE--------QI  249 (423)
T ss_dssp             ----------H----CCC-T--TBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHS-CCC--------HH--------HH
T ss_pred             ----------h----CCC-C--CCCceEEEEEECCEEEEEEeCCCCCcHHHHHhcc-CCC--------HH--------HH
Confidence                      1    111 2  12233322  235669999999999999988642 221        21        12


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+..+++.+|.|||+.||+||||||+|||++.+|.+||+|||+++.+..
T Consensus       250 ~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~  299 (423)
T 4fie_A          250 AAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  299 (423)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence            34667789999999999999999999999999999999999999987754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.91  E-value=1.1e-26  Score=225.92  Aligned_cols=156  Identities=16%  Similarity=0.221  Sum_probs=99.1

Q ss_pred             ccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          163 EPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      +.||+|+||+||+|++.      +++.||||+.+.........                                     
T Consensus        32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~-------------------------------------   74 (308)
T 4gt4_A           32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-------------------------------------   74 (308)
T ss_dssp             EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHH-------------------------------------
T ss_pred             eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHH-------------------------------------
Confidence            46999999999999862      57899999987643321110                                     


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCc--hhhhhhhHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSST--HLDRQKLDAKWR  312 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~  312 (433)
                      +|.+|+.-+.++    . +++  |.+.+..+  ....+||||||+||+|.+++.............  ......+.+...
T Consensus        75 ~f~~E~~il~~l----~-HpN--IV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (308)
T 4gt4_A           75 EFRHEAMLRARL----Q-HPN--VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF  147 (308)
T ss_dssp             HHHHHHHHHHHC----C-CTT--BCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHH
T ss_pred             HHHHHHHHHHhC----C-CCC--CCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHH
Confidence            112233322222    1 122  22233222  245699999999999999997543211000000  000011122222


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                        ..+..+++.||.|||+.+++|||+||+|||++.++.+||+|||+++.+..
T Consensus       148 --~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~  197 (308)
T 4gt4_A          148 --VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA  197 (308)
T ss_dssp             --HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGG
T ss_pred             --HHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccC
Confidence              12567889999999999999999999999999999999999999987644

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.91  E-value=6.3e-26  Score=222.52  Aligned_cols=157  Identities=18%  Similarity=0.162  Sum_probs=95.6

Q ss_pred             CccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|+||+||+|+++      +|+.||||+++......    .+                                 
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~----~~---------------------------------   88 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA----RQ---------------------------------   88 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHH----HH---------------------------------
T ss_pred             EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHH----HH---------------------------------
Confidence            467999999999999864      57899999987543221    01                                 


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCC-CCchhhhhhhHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDG-SSTHLDRQKLDAKWR  312 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~  312 (433)
                       +|.+|++-+.+    +.   +-+|.+++..+  ....+||||||+||+|.+++.......... .........+.+...
T Consensus        89 -~f~~E~~il~~----l~---HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~  160 (329)
T 4aoj_A           89 -DFQREAELLTM----LQ---HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL  160 (329)
T ss_dssp             -HHHHHHHHHTT----CC---CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHH
T ss_pred             -HHHHHHHHHHh----CC---CCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHH
Confidence             12233333222    11   22233333332  245699999999999999987543211000 000000011222222


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                        ..+..+++.+|.|||+.||+|||+||.|||++.++.+||+|||+++.+...
T Consensus       161 --~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~  211 (329)
T 4aoj_A          161 --LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST  211 (329)
T ss_dssp             --HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred             --HHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCC
Confidence              236678899999999999999999999999999999999999999877544

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.91  E-value=2.5e-26  Score=222.48  Aligned_cols=151  Identities=16%  Similarity=0.188  Sum_probs=98.3

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      -.+.||+|+||+||+|++.      +|+.||||+.+......    .+                                
T Consensus        17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~----~~--------------------------------   60 (299)
T 4asz_A           17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA----RK--------------------------------   60 (299)
T ss_dssp             EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHH----HH--------------------------------
T ss_pred             EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHH----HH--------------------------------
Confidence            3568999999999999863      57899999987543221    00                                


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCC-----CCCCCchhhhhhh
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSS-----VDGSSTHLDRQKL  307 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~-----~~~~~~~~~~~~~  307 (433)
                        +|.+|++-+.+    +.   +-+|.+.|..+  ....+||||||+||+|.+++.......     ......++     
T Consensus        61 --~f~~E~~il~~----l~---HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~-----  126 (299)
T 4asz_A           61 --DFHREAELLTN----LQ---HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT-----  126 (299)
T ss_dssp             --HHHHHHHHHTT----CC---CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCC-----
T ss_pred             --HHHHHHHHHHh----CC---CCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCC-----
Confidence              12233333222    11   22233333322  346699999999999999997532100     00000111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                       +...  ..+..+++.+|.|||+.||+|||+||.|||++.++.+||+|||+++.+..
T Consensus       127 -~~~~--~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  180 (299)
T 4asz_A          127 -QSQM--LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS  180 (299)
T ss_dssp             -HHHH--HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTG
T ss_pred             -HHHH--HHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCC
Confidence             1111  23667889999999999999999999999999999999999999986543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.91  E-value=1.4e-26  Score=224.33  Aligned_cols=147  Identities=20%  Similarity=0.235  Sum_probs=99.3

Q ss_pred             ccCCccccccccceeEEEEe----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          159 FISEEPVAAASFGQVYRGST----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      |...+.||+|+||+||+|+.    .+|+.||||+++......  .+                                  
T Consensus        26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~----------------------------------   69 (304)
T 3ubd_A           26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RD----------------------------------   69 (304)
T ss_dssp             EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EE----------------------------------
T ss_pred             cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HH----------------------------------
Confidence            33456899999999999985    257899999986532110  00                                  


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      ...+.+|..       .++...+-+|.+++..+  .+..+||||||+|++|.+++.....++        +.        
T Consensus        70 ~~~~~~E~~-------il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~--------e~--------  126 (304)
T 3ubd_A           70 RVRTKMERD-------ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT--------EE--------  126 (304)
T ss_dssp             CC------C-------CCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCC--------HH--------
T ss_pred             HHHHHHHHH-------HHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCC--------HH--------
Confidence            000111221       12222222333444332  356799999999999999997654433        11        


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ....+..+++.+|.|+|+.||+|||+||+|||++.+|.+||+|||+++....
T Consensus       127 ~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          127 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence            1234667888999999999999999999999999999999999999987643

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.90  E-value=8.9e-25  Score=227.92  Aligned_cols=205  Identities=14%  Similarity=0.092  Sum_probs=136.0

Q ss_pred             HHHHhcCCCCCCH----HHHHHHH---------------------HHhcCCCCCCHHHHHHH----HHHHhCCChhhhcc
Q 013944          108 GQSLSTRPDIIGS----DISKALS---------------------ELHDQIPPFPRSIAMKI----IEEELGSPVESFFS  158 (433)
Q Consensus       108 gQ~ls~r~dllp~----~~~~~L~---------------------~lqd~~p~~~~~~~~~~----l~~elg~~~~~~f~  158 (433)
                      ||+++|++|++|+    +.++++.                     .++|++++++.+.+.++    .+..++....+++.
T Consensus        73 ~~f~~t~~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v~~~~~~~l~~~~~~~~~~  152 (543)
T 3c4z_A           73 QQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLA  152 (543)
T ss_dssp             HHHHHHCGGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHHHCC---CTTHHHHHHHHH
T ss_pred             HHHHhcCCchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhhhcCCCchhhHHHHHHHHH
Confidence            7899999999999    7787877                     78899999998877666    22222222222222


Q ss_pred             ccC----------------------------------CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHH
Q 013944          159 FIS----------------------------------EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYI  203 (433)
Q Consensus       159 ~~~----------------------------------~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~  203 (433)
                      .+.                                  .+.||+|+||+||+|+. .+|+.||||+.+......   .   
T Consensus       153 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~---~---  226 (543)
T 3c4z_A          153 HLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK---R---  226 (543)
T ss_dssp             HHTTHHHHHHHTSHHHHHHHHHHHHHTSCCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH---T---
T ss_pred             hhhcCchHhhhhhhhhhhhhhhhhhhcccCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh---h---
Confidence            222                                  23599999999999997 479999999985321100   0   


Q ss_pred             HHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCc
Q 013944          204 LRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESP  283 (433)
Q Consensus       204 l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L  283 (433)
                                                   ...-.+..|...+.++     +++++.-...+....+..++||||++|++|
T Consensus       227 -----------------------------~~~~~~~~E~~iL~~l-----~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L  272 (543)
T 3c4z_A          227 -----------------------------KGYQGAMVEKKILAKV-----HSRFIVSLAYAFETKTDLCLVMTIMNGGDI  272 (543)
T ss_dssp             -----------------------------TCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEEEECCCTTCBH
T ss_pred             -----------------------------HHHHHHHHHHHHHHhc-----CCCCEeeEEEEEeeCCEEEEEEEeccCCCH
Confidence                                         0001123344443332     233322222222334667999999999999


Q ss_pred             chhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          284 TDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+++.......    ..+++.        ....+..++..+|.+||+.|++|||+||+||+++.+|.++|+|||++..+.
T Consensus       273 ~~~l~~~~~~~----~~l~e~--------~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          273 RYHIYNVDEDN----PGFQEP--------RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             HHHHHTSSTTS----CSCCHH--------HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             HHHHHHhhccc----ccccHH--------HHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            99886432100    011111        112356678899999999999999999999999999999999999998765


Q ss_pred             H
Q 013944          364 R  364 (433)
Q Consensus       364 ~  364 (433)
                      .
T Consensus       341 ~  341 (543)
T 3c4z_A          341 A  341 (543)
T ss_dssp             T
T ss_pred             C
Confidence            4

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.90  E-value=3.7e-24  Score=207.25  Aligned_cols=148  Identities=18%  Similarity=0.237  Sum_probs=93.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+++....+..   ...                                  +.
T Consensus         9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~---~~~----------------------------------~~   51 (299)
T 4g31_A            9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA---REK----------------------------------VM   51 (299)
T ss_dssp             EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHH---HHH----------------------------------HH
T ss_pred             EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHH---HHH----------------------------------HH
Confidence            346899999999999996 5899999998753221110   000                                  12


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccC--------------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhh
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLS--------------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQ  305 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--------------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~  305 (433)
                      +|...+.+    +. ++  +|.+.+..+.              ...+||||||+|++|.+++......+        +..
T Consensus        52 ~E~~il~~----l~-Hp--nIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~--------~~~  116 (299)
T 4g31_A           52 REVKALAK----LE-HP--GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE--------ERE  116 (299)
T ss_dssp             HHHHHHTT----CC-CT--TBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGG--------GSC
T ss_pred             HHHHHHHh----CC-CC--CCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCC--------hhH
Confidence            23222211    11 12  2233332211              12489999999999999987543211        110


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          306 KLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       306 ~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                           ......+..+++.+|.|||+.||+|||+||+|||++.+|.+||+|||+++.++..
T Consensus       117 -----~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~  171 (299)
T 4g31_A          117 -----RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD  171 (299)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC------
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCC
Confidence                 0111235678899999999999999999999999999999999999999988654

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.90  E-value=1.1e-23  Score=204.30  Aligned_cols=187  Identities=16%  Similarity=0.167  Sum_probs=113.3

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|+||.||+|+++  ..||||+.+......  .+.+.                                  |.+|
T Consensus        41 ~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~--~~~~~----------------------------------f~~E   82 (307)
T 3omv_A           41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTP--EQFQA----------------------------------FRNE   82 (307)
T ss_dssp             EEECCCCSSSEEEEEESS--SEEEEEECCCSSCCH--HHHHH----------------------------------HHHH
T ss_pred             eeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCH--HHHHH----------------------------------HHHH
Confidence            467999999999999864  369999987432211  11111                                  2334


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      +..+.+    +. +++  |.+.+... ....+||||||+|++|.+++...++.       +++.+      .  ..+..+
T Consensus        83 ~~il~~----l~-HpN--IV~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~-------l~~~~------~--~~i~~q  140 (307)
T 3omv_A           83 VAVLRK----TR-HVN--ILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-------FQMFQ------L--IDIARQ  140 (307)
T ss_dssp             HHHHTT----CC-CTT--BCCEEEEECSSSCEEEEECCSSCBHHHHHHTSCCC-------CCHHH------H--HHHHHH
T ss_pred             HHHHHh----CC-CCC--EeeEEEEEECCeEEEEEEcCCCCCHHHHHhhcCCC-------CCHHH------H--HHHHHH
Confidence            333322    21 222  22333322 25569999999999999998653221       11111      1  235678


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhc---CCCCC
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM---DVVRP  397 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---g~~~~  397 (433)
                      ++.+|.|||+.||+|||+||+|||++.++.+||+|||+++............    ...+....++......   +....
T Consensus       141 ia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~----~~~GT~~ymAPE~l~~~~~~~y~~  216 (307)
T 3omv_A          141 TAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE----QPTGSVLWMAPEVIRMQDNNPFSF  216 (307)
T ss_dssp             HHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----------------CCCCTTSCCHHHHHCCSSCCCCH
T ss_pred             HHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeec----ccccCCCccCHHHhhccCCCCCCc
Confidence            8999999999999999999999999999999999999998776433221111    1223333444444432   22344


Q ss_pred             CCChHHHHHHHHHHh
Q 013944          398 GTNTLRVTMDLEDAL  412 (433)
Q Consensus       398 ~~d~~~~~~~l~~~l  412 (433)
                      .+|+|+|+-.+.+++
T Consensus       217 ksDVwS~Gvvl~Ell  231 (307)
T 3omv_A          217 QSDVYSYGIVLYELM  231 (307)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHhHhHHHHHHHHH
Confidence            566666666666665

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.89  E-value=4.3e-24  Score=205.65  Aligned_cols=142  Identities=18%  Similarity=0.154  Sum_probs=97.8

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      +.||+|+||.||+|+. .+|+.||||+........  .+...                                  |.+|
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~~~~~----------------------------------~~~E   75 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SERQR----------------------------------FKEE   75 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHHHH----------------------------------HHHH
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH--HHHHH----------------------------------HHHH
Confidence            4699999999999996 579999999876432111  11111                                  1233


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      ++.+.+    +. ++  +|.+++..+.      ...+||||||+|++|.+++.....++        +.        ...
T Consensus        76 ~~il~~----l~-Hp--nIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~--------~~--------~~~  132 (290)
T 3fpq_A           76 AEMLKG----LQ-HP--NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK--------IK--------VLR  132 (290)
T ss_dssp             HHHHHT----CC-CT--TBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCC--------HH--------HHH
T ss_pred             HHHHHh----CC-CC--CCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCC--------HH--------HHH
Confidence            333322    22 22  2334443221      23589999999999999997654332        11        122


Q ss_pred             HHHHHHHHHHHHHHHCC--ccccCCCCCceEEc-cCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETG--ILHADPHPGNLRYT-SSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~g--ivH~DlhpgNilv~-~~g~l~l~DFGl~~~l~  363 (433)
                      .+..+++.+|.|||++|  |+|||+||+|||++ ++|.+||+|||+++...
T Consensus       133 ~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          133 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             HHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence            35677889999999999  99999999999997 47999999999997544

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.88  E-value=3.1e-24  Score=215.78  Aligned_cols=147  Identities=16%  Similarity=0.161  Sum_probs=97.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+++......  .+...+                                  .
T Consensus        58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~--~~~~~~----------------------------------~  101 (398)
T 4b99_A           58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TNAKRT----------------------------------L  101 (398)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSH--HHHHHH----------------------------------H
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEECccccch--HHHHHH----------------------------------H
Confidence            356899999999999996 589999999986432211  011111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc-----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY-----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~-----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      +|.+.+.+    +.+.+-+.+-.++..     .....+||||||+| +|.+++.....++        +.        ..
T Consensus       102 ~Ei~il~~----l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g-~L~~~i~~~~~l~--------~~--------~~  160 (398)
T 4b99_A          102 RELKILKH----FKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLT--------LE--------HV  160 (398)
T ss_dssp             HHHHHHHH----CCCTTBCCEEEECCCSSCTTTCCCEEEEEECCSE-EHHHHHTSSSCCC--------HH--------HH
T ss_pred             HHHHHHHh----cCCCCcceEeeeeecccccccCCEEEEEEeCCCC-CHHHHHHhcCCCC--------HH--------HH
Confidence            12222222    222221222222211     12456999999975 6888886544332        11        12


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+..++..+|.|||+.||+|||+||+|||++.+|.++++|||+++.+..
T Consensus       161 ~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          161 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred             HHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence            34677889999999999999999999999999999999999999987754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.87  E-value=2.4e-22  Score=211.99  Aligned_cols=194  Identities=15%  Similarity=0.173  Sum_probs=121.9

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+++.....  ..+                   ..               ...
T Consensus       193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~--~~~-------------------~~---------------~~~  236 (689)
T 3v5w_A          193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK--MKQ-------------------GE---------------TLA  236 (689)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTT-------------------CH---------------HHH
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcc--hhh-------------------hH---------------HHH
Confidence            346899999999999996 58999999998531100  000                   00               000


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .+.+++..   .+....+-.|.+++..+  ....+||||||+||+|.+++.....++        +.        ....+
T Consensus       237 ~~E~~~l~---ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~--------E~--------~a~~y  297 (689)
T 3v5w_A          237 LNERIMLS---LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS--------EA--------DMRFY  297 (689)
T ss_dssp             HHHHHHHH---HHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCC--------HH--------HHHHH
T ss_pred             HHHHHHHH---HHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCC--------HH--------HHHHH
Confidence            01111111   22222222234444433  356799999999999999997654333        11        22456


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcC-CCC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD-VVR  396 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g-~~~  396 (433)
                      ..+++.+|.|||+.||+||||||+|||++.+|.++|+|||+++.+.......        ..+....++..++.-| ...
T Consensus       298 ~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t--------~~GTp~YmAPEvl~~~~~y~  369 (689)
T 3v5w_A          298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--------SVGTHGYMAPEVLQKGVAYD  369 (689)
T ss_dssp             HHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCS--------CCSCGGGCCHHHHSTTCCCC
T ss_pred             HHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCCCC--------ccCCcCccCHHHHhCCCCCC
Confidence            7788999999999999999999999999999999999999998876532211        1233444444444322 234


Q ss_pred             CCCChHHHHHHHHHHh-hchhc
Q 013944          397 PGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       397 ~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      ..+|+|+++-.++++| |..+|
T Consensus       370 ~~vDiWSLGvilYEmLtG~~PF  391 (689)
T 3v5w_A          370 SSADWFSLGCMLFKLLRGHSPF  391 (689)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTT
T ss_pred             cHHHHHHHHHHHHHHHhCCCCC
Confidence            4556665555555554 44444

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.87  E-value=1.1e-22  Score=197.47  Aligned_cols=140  Identities=20%  Similarity=0.222  Sum_probs=95.1

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      .-.+.||+|+||.||+|++ +|+.||||+.+..-......                                       .
T Consensus         6 ~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~---------------------------------------e   45 (303)
T 3hmm_A            6 VLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFR---------------------------------------E   45 (303)
T ss_dssp             EEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHH---------------------------------------H
T ss_pred             EEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHH---------------------------------------H
Confidence            3467899999999999997 79999999986432211100                                       0


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      .|...+.    .+. +++  +.+.+..+.      ...+||||||+|++|.+++.... .+              +...+
T Consensus        46 ~Ei~~~~----~l~-HpN--Iv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-l~--------------~~~~~  103 (303)
T 3hmm_A           46 AEIYQTV----MLR-HEN--ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VT--------------VEGMI  103 (303)
T ss_dssp             HHHHTST----TCC-CTT--BCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC-BC--------------HHHHH
T ss_pred             HHHHHHh----cCC-CCC--CCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCC-CC--------------HHHHH
Confidence            1111100    111 222  222332211      24689999999999999986431 11              11111


Q ss_pred             HHHHHHHHHHHHHHHHHC--------CccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLET--------GILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~--------givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                        -+..+++.+|.|+|.+        ||+|||+||+|||++.+|.+||+|||+++...
T Consensus       104 --~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  159 (303)
T 3hmm_A          104 --KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             --HHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             --HHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence              2456788999999987        99999999999999999999999999987653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.87  E-value=3.2e-23  Score=205.04  Aligned_cols=187  Identities=16%  Similarity=0.124  Sum_probs=114.6

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      -.+.||+|+||.||+|++.      +++.||||+.+.+....   +.+.                               
T Consensus        68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~---~~~~-------------------------------  113 (353)
T 4ase_A           68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS---EHRA-------------------------------  113 (353)
T ss_dssp             EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHH---HHHH-------------------------------
T ss_pred             EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChH---HHHH-------------------------------
Confidence            3568999999999999863      34689999987654332   1111                               


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeeccc---CCceEEEeeccCCCCcchhhhhccCCCCC-CCC-chhhhhhhHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYL---SRKRVLTMEWMVGESPTDLISLSTGSSVD-GSS-THLDRQKLDA  309 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LVmE~i~G~~L~~~l~~~~~~~~~-~~~-~~~~~~~~~~  309 (433)
                         |..|.+.+.++    .++++  |.+.+..+   ....+||||||+||+|.+++......... ... .......+..
T Consensus       114 ---~~~E~~il~~l----~hhpn--IV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~  184 (353)
T 4ase_A          114 ---LMSELKILIHI----GHHLN--VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL  184 (353)
T ss_dssp             ---HHHHHHHHHHH----CCCTT--BCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCH
T ss_pred             ---HHHHHHHHHHc----CCCCc--EEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCH
Confidence               22344333333    22222  23333322   24569999999999999999754321000 000 0000011112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH---------------HHHHHHH
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------------FAMLASI  374 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------------~~~~~~~  374 (433)
                      ...  ..+..+++.+|.|||+.+++||||||.|||++.++.+||+|||+++.+..+..               +..+..-
T Consensus       185 ~~~--~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~  262 (353)
T 4ase_A          185 EHL--ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR  262 (353)
T ss_dssp             HHH--HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHC
T ss_pred             HHH--HHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcC
Confidence            211  23567889999999999999999999999999999999999999987643211               1111111


Q ss_pred             HHHHhcCHHHHHHHHHhc
Q 013944          375 VHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       375 ~~~~~~d~~~~~~~l~~~  392 (433)
                      ......|+|+++-.+++|
T Consensus       263 ~y~~ksDVwS~Gv~l~El  280 (353)
T 4ase_A          263 VYTIQSDVWSFGVLLWEI  280 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcccEeehHHHHHHH
Confidence            123345777777777765

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.87  E-value=6.1e-23  Score=204.84  Aligned_cols=211  Identities=12%  Similarity=0.105  Sum_probs=137.8

Q ss_pred             HhcCCCCCCHHHHHHHHHHh-cCCCCCCHHHHHHHHHHHhCCChhhhc-----------cccCCccccccccceeEEEEe
Q 013944          111 LSTRPDIIGSDISKALSELH-DQIPPFPRSIAMKIIEEELGSPVESFF-----------SFISEEPVAAASFGQVYRGST  178 (433)
Q Consensus       111 ls~r~dllp~~~~~~L~~lq-d~~p~~~~~~~~~~l~~elg~~~~~~f-----------~~~~~~pigsgS~gqVy~a~l  178 (433)
                      -|+++|++++++.+.+..++ +.+++.+...+...+..++-. .+..+           .|...+.||+|+||+||+|+.
T Consensus        16 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~   94 (377)
T 3byv_A           16 FQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWN-TGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATD   94 (377)
T ss_dssp             -CCTTHHHHHHHHHHCGGGCCCSTTC-CHHHHHHHHHHHTCC--CCEEEEEESSSCCCEEEEEEEEEEEETTEEEEEEEC
T ss_pred             CCCCchHHHHHHHHhCcccccccccccccchhhhhhHHHhcC-CCCcEEEEeecCCCCceEEEcceeecCCCEEEEEEEE
Confidence            37888999999999999999 999999999888887776621 11111           122357899999999999995


Q ss_pred             -cCCCEEEEEEcCCCc------hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHh
Q 013944          179 -LDGSIVAVKVQRPNL------RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQES  251 (433)
Q Consensus       179 -~~G~~VAVKv~~p~~------~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~  251 (433)
                       .+|+.||||+.+...      .+.+.+|+.+++       .+.                       ...+.|+.++...
T Consensus        95 ~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~-------~l~-----------------------~l~hpniv~~~~~  144 (377)
T 3byv_A           95 QETGESFEVHVPYFTERPPSNAIKQMKEEVLRLR-------LLR-----------------------GIKNQKQAKVHLR  144 (377)
T ss_dssp             -CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGG-------GST-----------------------TCCSHHHHHHHHC
T ss_pred             CCCCcEEEEEEEeeccccchHHHHHHHHHHHHHH-------hcc-----------------------ccCCHHHHHHHhh
Confidence             579999999975321      122222222111       110                       1146788888765


Q ss_pred             cCCCCCe-Eec---eeecccC-------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          252 HSPFPFI-HVP---KVFRYLS-------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       252 ~~~~~~v-~vP---~v~~~~~-------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      +.....+ ..+   .....+.       ...+|||||+ +++|.+++......+..       ...  +.......+..+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~-------~~~--l~~~~~~~i~~q  214 (377)
T 3byv_A          145 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSST-------HKS--LVHHARLQLTLQ  214 (377)
T ss_dssp             BCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTT-------THH--HHHHHHHHHHHH
T ss_pred             hhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccc-------ccc--ccHHHHHHHHHH
Confidence            4322111 000   0000000       1258999999 56999998754322200       011  111122236678


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ++.+|.+||+.|++|+|+||+||+++.+|.++|+|||++...
T Consensus       215 i~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~  256 (377)
T 3byv_A          215 VIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD  256 (377)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEET
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheec
Confidence            889999999999999999999999999999999999998754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.87  E-value=2.1e-22  Score=200.02  Aligned_cols=193  Identities=17%  Similarity=0.185  Sum_probs=118.9

Q ss_pred             CCccccccccceeEEEEec----CCCEEEEEEcCCCch-hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLR-HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~-~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      -.+.||+|+||+||+|+.+    +++.||||+..+... ..+.+++++|+                              
T Consensus        25 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~------------------------------   74 (361)
T 4f9c_A           25 IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLT------------------------------   74 (361)
T ss_dssp             EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHH------------------------------
T ss_pred             EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHH------------------------------
Confidence            3568999999999999852    578999998765422 22222222222                              


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCe-EeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFI-HVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                                     .+.+++++ .+-.++ ......+||||||+|++|.+++..   ++        +.+        .
T Consensus        75 ---------------~~~~h~nIv~l~~~~-~~~~~~~lvmE~~~g~~L~~~~~~---l~--------~~~--------~  119 (361)
T 4f9c_A           75 ---------------VAGGQDNVMGVKYCF-RKNDHVVIAMPYLEHESFLDILNS---LS--------FQE--------V  119 (361)
T ss_dssp             ---------------HTCSBTTBCCCSEEE-EETTEEEEEEECCCCCCHHHHHTT---CC--------HHH--------H
T ss_pred             ---------------HhcCCCCCceEEEEE-EECCEEEEEEeCCCcccHHHHHcC---CC--------HHH--------H
Confidence                           11122222 121222 224566999999999999998742   21        111        2


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccC-CcEEEEecccccccCHHHH------------HHH----HH-----
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKHQ------------FAM----LA-----  372 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l~~~~~------------~~~----~~-----  372 (433)
                      ..+..++..+|.|||+.||+|||+||+|||++.+ |.++|+|||+++...+...            ...    ..     
T Consensus       120 ~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (361)
T 4f9c_A          120 REYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSR  199 (361)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccc
Confidence            3466788899999999999999999999999877 8999999999976532110            000    00     


Q ss_pred             -HHHHHHhcCHHHHHHHHH-hcCCCCCCCChHHHHHHHHHHh-hchhcc
Q 013944          373 -SIVHIVNGDWQSLVHSLT-EMDVVRPGTNTLRVTMDLEDAL-GEVEFK  418 (433)
Q Consensus       373 -~~~~~~~~d~~~~~~~l~-~~g~~~~~~d~~~~~~~l~~~l-~~~~~~  418 (433)
                       .......+..+.++..+. ........+|+|+++-.+.+++ |..+|.
T Consensus       200 ~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~  248 (361)
T 4f9c_A          200 RQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY  248 (361)
T ss_dssp             ------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             cccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence             000011233333444433 3334566778888887777776 455553

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.85  E-value=6.4e-22  Score=193.18  Aligned_cols=178  Identities=17%  Similarity=0.142  Sum_probs=117.3

Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHH
Q 013944          125 ALSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYI  203 (433)
Q Consensus       125 ~L~~lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~  203 (433)
                      ....+.-..++++.+++++.++..++.+....+- ...++||+|+||+||+|+.+ +|+.||||+.++.......    .
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~----~   88 (321)
T 2c30_A           14 GTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLL-DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE----L   88 (321)
T ss_dssp             -----------CCHHHHHHHHHTTSCSSCHHHHE-EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHH----H
T ss_pred             hccceeecCCcCcHHHHHHHHhhccCCCCchhhh-hccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHH----H
Confidence            3445666678999999999998888766544332 23458999999999999975 8999999998764332110    0


Q ss_pred             HHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCc
Q 013944          204 LRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESP  283 (433)
Q Consensus       204 l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L  283 (433)
                                                        +.+|...+.+    +. ++++.-+.-+.......++||||++|++|
T Consensus        89 ----------------------------------~~~E~~~l~~----l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L  129 (321)
T 2c30_A           89 ----------------------------------LFNEVVIMRD----YQ-HFNVVEMYKSYLVGEELWVLMEFLQGGAL  129 (321)
T ss_dssp             ----------------------------------HHHHHHHHTT----CC-CTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred             ----------------------------------HHHHHHHHHh----CC-CCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence                                              1223333222    21 23322222222345678999999999999


Q ss_pred             chhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          284 TDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       284 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+++... ..        ++..        ...+..++..++.+||+.|++|+|+||+||+++.+|+++|+|||++..+.
T Consensus       130 ~~~l~~~-~l--------~~~~--------~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~  192 (321)
T 2c30_A          130 TDIVSQV-RL--------NEEQ--------IATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS  192 (321)
T ss_dssp             HHHHTTC-CC--------CHHH--------HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHHHhc-CC--------CHHH--------HHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecc
Confidence            9987532 11        1111        12355678889999999999999999999999999999999999987654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.83  E-value=1.3e-22  Score=213.31  Aligned_cols=147  Identities=20%  Similarity=0.279  Sum_probs=99.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+++.....    +...+.                                  
T Consensus       161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~----~~~~~~----------------------------------  202 (573)
T 3uto_A          161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----DKETVR----------------------------------  202 (573)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----HHHHHH----------------------------------
T ss_pred             EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchh----hHHHHH----------------------------------
Confidence            356899999999999996 58999999987543211    111111                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      +|...+..    +.+.+-+.+-.++ ......+||||||+|++|.+++....+       .+++.+        ...+..
T Consensus       203 ~Ei~il~~----l~hpnIv~l~~~~-~~~~~~~iv~E~~~gg~L~~~i~~~~~-------~l~e~~--------~~~~~~  262 (573)
T 3uto_A          203 KEIQTMSV----LRHPTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHN-------KMSEDE--------AVEYMR  262 (573)
T ss_dssp             HHHHHHHH----TCCTTBCCEEEEE-ECSSEEEEEEECCCCCBHHHHHTCTTS-------CEEHHH--------HHHHHH
T ss_pred             HHHHHHHh----CCCCCCCeEEEEE-EECCEEEEEEeecCCCcHHHHHHHhCC-------CCCHHH--------HHHHHH
Confidence            12222211    2211112222222 224566999999999999998853321       122221        234667


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccC--CcEEEEecccccccCHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSS--GQIGFLDFGLLCRMERK  365 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~--g~l~l~DFGl~~~l~~~  365 (433)
                      +++.+|.|||++||+|||+||.|||++.+  |.+||+|||+++.+.+.
T Consensus       263 qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          263 QVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             HHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            88899999999999999999999999854  89999999999987653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.82  E-value=6.8e-20  Score=179.14  Aligned_cols=183  Identities=17%  Similarity=0.210  Sum_probs=111.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+...........++.+++                                  
T Consensus        15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~----------------------------------   60 (325)
T 3kn6_A           15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALK----------------------------------   60 (325)
T ss_dssp             TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHH----------------------------------
T ss_pred             CCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHH----------------------------------
Confidence            457899999999999996 479999999986544333333332222                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                             +    +.++++  +++++..  .....++||||++|++|.+++......+        +..        ...+
T Consensus        61 -------~----l~~h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~i  111 (325)
T 3kn6_A           61 -------L----CEGHPN--IVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFS--------ETE--------ASYI  111 (325)
T ss_dssp             -------H----TTTCTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCC--------HHH--------HHHH
T ss_pred             -------H----hcCCCC--eeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCC--------HHH--------HHHH
Confidence                   1    222232  3333332  3356799999999999999987643332        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCC---cEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSG---QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g---~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      ..++..++.+||+.|++|+|+||+||+++.++   .++|+|||++..........-.      ..+....++..+..-..
T Consensus       112 ~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~------~~~t~~y~aPE~~~~~~  185 (325)
T 3kn6_A          112 MRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT------PCFTLHYAAPELLNQNG  185 (325)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------------CC
T ss_pred             HHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccc------cCCCcCccCHHHhcCCC
Confidence            66788899999999999999999999998766   8999999999876543221100      00112222333332223


Q ss_pred             CCCCCChHHHHHHHHHHh
Q 013944          395 VRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l  412 (433)
                      ..+..|+++++..+.+++
T Consensus       186 ~~~~~DiwslG~il~~ll  203 (325)
T 3kn6_A          186 YDESCDLWSLGVILYTML  203 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHH
T ss_pred             CCCccchHHHHHHHHHHH
Confidence            344556666666665555

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.82  E-value=5.6e-20  Score=182.05  Aligned_cols=179  Identities=21%  Similarity=0.213  Sum_probs=114.6

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+...... ..+...+                                 
T Consensus        25 y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~-~~~~~~~---------------------------------   70 (353)
T 3txo_A           25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ-DDDVECT---------------------------------   70 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-HTTHHHH---------------------------------
T ss_pred             eEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcc-hhHHHHH---------------------------------
Confidence            33456899999999999996 479999999986421100 0000000                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       ..|.+.+.    ...++++  +++++..  .....+|||||++|++|.+++......+        +.        ...
T Consensus        71 -~~E~~il~----~~~~hp~--Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~--------~~--------~~~  127 (353)
T 3txo_A           71 -MTEKRILS----LARNHPF--LTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD--------EA--------RAR  127 (353)
T ss_dssp             -HHHHHHHH----HTTTCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCC--------HH--------HHH
T ss_pred             -HHHHHHHH----hccCCCc--eeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HH--------HHH
Confidence             11222221    1222333  3333333  3456799999999999999887554332        11        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH-------------HHHHHHHHHHHhcCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ-------------FAMLASIVHIVNGDW  382 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~-------------~~~~~~~~~~~~~d~  382 (433)
                      .+..++..+|.+||+.|++|||+||+||+++.+|.++|+|||+++.......             ..++..-......|+
T Consensus       128 ~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  207 (353)
T 3txo_A          128 FYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDW  207 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCC
Confidence            4566788899999999999999999999999999999999999886432111             111111112335578


Q ss_pred             HHHHHHHHhcCC
Q 013944          383 QSLVHSLTEMDV  394 (433)
Q Consensus       383 ~~~~~~l~~~g~  394 (433)
                      |+++..+++|-.
T Consensus       208 wslG~il~ell~  219 (353)
T 3txo_A          208 WAMGVLLYEMLC  219 (353)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             CcchHHHHHHHh
Confidence            888887777633

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.81  E-value=2e-21  Score=190.56  Aligned_cols=213  Identities=16%  Similarity=0.146  Sum_probs=131.1

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+........  .+...+                                 
T Consensus        17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~---------------------------------   61 (328)
T 3fe3_A           17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP--TSLQKL---------------------------------   61 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHHHHH---------------------------------
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH--HHHHHH---------------------------------
Confidence            44567899999999999996 689999999876432111  011111                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       ..|.+.+..    +. ++  ++++++..  .....++||||++|++|.+++......+        +..        ..
T Consensus        62 -~~E~~~l~~----l~-hp--nIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~--------~~~--------~~  117 (328)
T 3fe3_A           62 -FREVRIMKI----LN-HP--NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMK--------EKE--------AR  117 (328)
T ss_dssp             -HHHHHHHHH----CC-CT--TBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCC--------HHH--------HH
T ss_pred             -HHHHHHHHh----CC-CC--CEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCC--------HHH--------HH
Confidence             123322222    22 22  23333432  3456799999999999999987554332        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH------------HHHHHHHH-HHHhcCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ------------FAMLASIV-HIVNGDW  382 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~------------~~~~~~~~-~~~~~d~  382 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.....            +.++..-. .....|.
T Consensus       118 ~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di  197 (328)
T 3fe3_A          118 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDV  197 (328)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhh
Confidence            3556788899999999999999999999999999999999999976543211            11110000 0134577


Q ss_pred             HHHHHHHHhcCCCCCC---CChHHH---------------HHHHHHHhhchhccCCCCCccccccc
Q 013944          383 QSLVHSLTEMDVVRPG---TNTLRV---------------TMDLEDALGEVEFKDGIPDVKFSRVR  430 (433)
Q Consensus       383 ~~~~~~l~~~g~~~~~---~d~~~~---------------~~~l~~~l~~~~~~~~~~~~~~~~~l  430 (433)
                      |+++..+++|-.....   .+...+               ..++.+++...+.-+|-.+.++.+++
T Consensus       198 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil  263 (328)
T 3fe3_A          198 WSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIM  263 (328)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHT
T ss_pred             hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            8888877776332222   222211               12344455555555666666666655

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.81  E-value=7e-20  Score=178.09  Aligned_cols=82  Identities=21%  Similarity=0.319  Sum_probs=64.6

Q ss_pred             eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc
Q 013944          271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ  350 (433)
Q Consensus       271 ~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~  350 (433)
                      .++||||++|++|.+++.......        +.   .  ......+..++..+|.+||+.|++|+|+||+||+++.+|.
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~~~~--------~~---~--~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  202 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRCSLE--------DR---E--HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV  202 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCCSGG--------GS---C--HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC
T ss_pred             EEEEEEecCCCCHHHHHhcccCcc--------ch---h--hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCC
Confidence            689999999999999987543211        00   0  0011235667889999999999999999999999999999


Q ss_pred             EEEEecccccccCHH
Q 013944          351 IGFLDFGLLCRMERK  365 (433)
Q Consensus       351 l~l~DFGl~~~l~~~  365 (433)
                      ++|+|||+++.+...
T Consensus       203 ~kL~DfG~a~~~~~~  217 (332)
T 3qd2_B          203 VKVGDFGLVTAMDQD  217 (332)
T ss_dssp             EEECCCTTCEECSCC
T ss_pred             EEEeecCcccccccc
Confidence            999999999877543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.81  E-value=8.9e-20  Score=178.41  Aligned_cols=148  Identities=19%  Similarity=0.219  Sum_probs=97.0

Q ss_pred             ccCCccccccccceeEEEEe----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          159 FISEEPVAAASFGQVYRGST----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      |...+.||+|+||.||+|+.    .+|+.||||+.+......-..+...                               
T Consensus        19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~-------------------------------   67 (327)
T 3a62_A           19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAH-------------------------------   67 (327)
T ss_dssp             EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------------------------------
T ss_pred             eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHH-------------------------------
Confidence            33457899999999999986    4789999999876432110111111                               


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                         +..|...+.+    +. ++  .+++++..  .....++||||++|++|.+++......+        +.        
T Consensus        68 ---~~~E~~~l~~----l~-hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------  121 (327)
T 3a62_A           68 ---TKAERNILEE----VK-HP--FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFM--------ED--------  121 (327)
T ss_dssp             ------HHHHHHH----CC-CT--TBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCC--------HH--------
T ss_pred             ---HHHHHHHHHh----CC-CC--CccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCC--------HH--------
Confidence               1123322222    22 22  23333332  3456799999999999999886543222        11        


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ....+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++....
T Consensus       122 ~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~  172 (327)
T 3a62_A          122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI  172 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence            112355678889999999999999999999999999999999999987643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.80  E-value=1.2e-19  Score=177.89  Aligned_cols=176  Identities=15%  Similarity=0.095  Sum_probs=104.4

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCch-----------hhHHHHHHHHHHHHHHHHHHH-hhcCCHHHHHH
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLR-----------HVVVRDIYILRIGLGLLQKIA-KRKSDLRLYAD  226 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~-----------~~~~~Dl~~l~~~~~~~~~~~-~~~~~~~~~~~  226 (433)
                      |...+.||+|+||+||+|+. +|+.||||+.+....           +.+..++.+++.+-.+ ..+. ..+.++..+.+
T Consensus        22 y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l-~~~~~~~h~niv~l~~   99 (336)
T 2vuw_A           22 LQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLL-SGEVCNRTEGFIGLNS   99 (336)
T ss_dssp             HHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHG-GGCSSSBCCCBCCEEE
T ss_pred             chheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHh-hccccccCCchhhhcc
Confidence            44567899999999999987 889999999865421           4445555555422100 0000 00000000000


Q ss_pred             HHHHHhHhhhchHHHHHHHHHHHHhcCCCCCe--EeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhh
Q 013944          227 ELGKGLVGELDYTLEAANASEFQESHSPFPFI--HVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDR  304 (433)
Q Consensus       227 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v--~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~  304 (433)
                             ..+.-...+.|+.++.+.+.....-  .-|..  .-....+|||||++|+++.+.+.. ...        ++.
T Consensus       100 -------~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~--~~~~~~~lv~E~~~~g~ll~~~~~-~~~--------~~~  161 (336)
T 2vuw_A          100 -------VHCVQGSYPPLLLKAWDHYNSTKGSANDRPDF--FKDDQLFIVLEFEFGGIDLEQMRT-KLS--------SLA  161 (336)
T ss_dssp             -------EEEEESSCCHHHHHHHHHHHHHTCCSSCCSCC--CCTTCEEEEEEEECCCEETGGGTT-TCC--------CHH
T ss_pred             -------eeEecCCCcHHHHHHHHHHhhhccccccCccc--cccCeEEEEEEecCCCccHHHHHh-cCC--------CHH
Confidence                   0000000145666666655321000  00000  013456999999999976665532 111        111


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCceEEccCC--------------------cEEEEeccccccc
Q 013944          305 QKLDAKWRLLDLVNKGVEATLVQLL-ETGILHADPHPGNLRYTSSG--------------------QIGFLDFGLLCRM  362 (433)
Q Consensus       305 ~~~~~~~~l~~l~~~~i~~~l~~lh-~~givH~DlhpgNilv~~~g--------------------~l~l~DFGl~~~l  362 (433)
                              ....+..++..+|.+|| +.|++|||+||+|||++.+|                    .++|+|||+++.+
T Consensus       162 --------~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~  232 (336)
T 2vuw_A          162 --------TAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLE  232 (336)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEE
T ss_pred             --------HHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEec
Confidence                    12346677889999999 99999999999999999887                    9999999999765

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.80  E-value=6e-20  Score=178.00  Aligned_cols=148  Identities=19%  Similarity=0.224  Sum_probs=98.6

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|+||+|+. .+|+.||||+.+......-.    ...                               .+
T Consensus        15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~----~~~-------------------------------~~   59 (311)
T 3ork_A           15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPS----FYL-------------------------------RF   59 (311)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHH----HHH-------------------------------HH
T ss_pred             EEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHH----HHH-------------------------------HH
Confidence            3457899999999999995 68999999998765332100    000                               01


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCC------ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSR------KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~------~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      ..|..       .+....+-++++++..+..      ..++||||++|++|.+++......+        +..       
T Consensus        60 ~~E~~-------~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~--------~~~-------  117 (311)
T 3ork_A           60 RREAQ-------NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--------PKR-------  117 (311)
T ss_dssp             HHHHT-------TCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCC--------HHH-------
T ss_pred             HHHHH-------HHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCC--------HHH-------
Confidence            11222       1222233334555543221      2389999999999999987543322        111       


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      . ..+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+...
T Consensus       118 ~-~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  169 (311)
T 3ork_A          118 A-IEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS  169 (311)
T ss_dssp             H-HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred             H-HHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence            1 234567888999999999999999999999999999999999999877543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.80  E-value=1.5e-19  Score=174.05  Aligned_cols=194  Identities=17%  Similarity=0.172  Sum_probs=119.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+........-. ....                                  +.
T Consensus        15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~----------------------------------~~   59 (294)
T 4eqm_A           15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEE-TLKR----------------------------------FE   59 (294)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHH-HHHH----------------------------------HH
T ss_pred             EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHH-HHHH----------------------------------HH
Confidence            456899999999999995 58999999987543221100 0000                                  12


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +   .+-.+++++..  .....++||||++|++|.+++......+        +..        ...+
T Consensus        60 ~e~~~l~~----l---~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~--------~~~--------~~~~  116 (294)
T 4eqm_A           60 REVHNSSQ----L---SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLS--------VDT--------AINF  116 (294)
T ss_dssp             HHHHHHTT----C---CBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCC--------HHH--------HHHH
T ss_pred             HHHHHHhc----C---CCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCC--------HHH--------HHHH
Confidence            23322222    1   22234444433  2356799999999999999987544322        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~  397 (433)
                      ..++..++.++|+.|++|+|+||+||+++.+|.++|+|||++..+.........     ...+....++.....-....+
T Consensus       117 ~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~  191 (294)
T 4eqm_A          117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTN-----HVLGTVQYFSPEQAKGEATDE  191 (294)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------------------CCSSCCHHHHHTCCCCT
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccC-----ccccCccccCHhHhcCCCCCc
Confidence            567888999999999999999999999999999999999999877643221110     011122222333333344456


Q ss_pred             CCChHHHHHHHHHHh-hchhc
Q 013944          398 GTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       398 ~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      ..|+++++..+.+++ |..+|
T Consensus       192 ~~Di~slG~~l~~ll~g~~pf  212 (294)
T 4eqm_A          192 CTDIYSIGIVLYEMLVGEPPF  212 (294)
T ss_dssp             THHHHHHHHHHHHHHHSSCSS
T ss_pred             hHhHHHHHHHHHHHHhCCCCC
Confidence            677887777776666 44444

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.80  E-value=1.4e-20  Score=181.54  Aligned_cols=143  Identities=19%  Similarity=0.286  Sum_probs=99.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.........    ..                                  
T Consensus        22 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~----------------------------------   63 (297)
T 3fxz_A           22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK----EL----------------------------------   63 (297)
T ss_dssp             BCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCH----HH----------------------------------
T ss_pred             eeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHH----HH----------------------------------
Confidence            45567899999999999995 6899999998753221110    00                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.+    +. ++  ++++++..  .....++||||++|++|.+++... ..+        +..        ..
T Consensus        64 ~~~E~~~l~~----l~-hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~--------~~~--------~~  119 (297)
T 3fxz_A           64 IINEILVMRE----NK-NP--NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMD--------EGQ--------IA  119 (297)
T ss_dssp             HHHHHHHHHH----CC-CT--TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-CCC--------HHH--------HH
T ss_pred             HHHHHHHHhc----CC-CC--CCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc-CCC--------HHH--------HH
Confidence            0112222211    22 22  23444432  345679999999999999988643 111        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       120 ~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (297)
T 3fxz_A          120 AVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (297)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            355678889999999999999999999999999999999999987654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.80  E-value=1.4e-20  Score=186.80  Aligned_cols=145  Identities=18%  Similarity=0.218  Sum_probs=99.4

Q ss_pred             CccccccccceeEEEE------ecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGS------TLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~------l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|+||.||+|+      ..+|+.||||+.++.....+..+..+++                              
T Consensus        70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~------------------------------  119 (365)
T 3e7e_A           70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLME------------------------------  119 (365)
T ss_dssp             EEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHH------------------------------
T ss_pred             EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHH------------------------------
Confidence            4579999999999994      3578999999998765544333332222                              


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                                 ++    ....+-.+...+..  .....+|||||++|++|.+++......+..   .+++.        .
T Consensus       120 -----------~l----~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~---~l~~~--------~  173 (365)
T 3e7e_A          120 -----------RL----KPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEK---VMPQG--------L  173 (365)
T ss_dssp             -----------HS----CGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTC---SCCHH--------H
T ss_pred             -----------Hh----hhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhccccc---CCCHH--------H
Confidence                       11    11111123333332  346779999999999999998753221100   01111        1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEcc-----------CCcEEEEeccccccc
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTS-----------SGQIGFLDFGLLCRM  362 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~-----------~g~l~l~DFGl~~~l  362 (433)
                      ...+..+++.+|.|||+.|++|||+||+|||++.           ++.++|+|||++..+
T Consensus       174 ~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~  233 (365)
T 3e7e_A          174 VISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM  233 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEG
T ss_pred             HHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhh
Confidence            1236677889999999999999999999999988           899999999999654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=2.4e-19  Score=175.74  Aligned_cols=177  Identities=19%  Similarity=0.187  Sum_probs=95.4

Q ss_pred             hcCCCCCCHHHHHHHHHHHhCCChhhhccccCC----------ccccccccceeEEEEec-C----CCEEEEEEcCCCch
Q 013944          130 HDQIPPFPRSIAMKIIEEELGSPVESFFSFISE----------EPVAAASFGQVYRGSTL-D----GSIVAVKVQRPNLR  194 (433)
Q Consensus       130 qd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~----------~pigsgS~gqVy~a~l~-~----G~~VAVKv~~p~~~  194 (433)
                      ++..+..+.......++...+.++.+.+..+..          +.||+|+||+||+|+.. +    +..||||+.+.+..
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~   86 (333)
T 1mqb_A            7 HHHHDYDIPTTENLYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT   86 (333)
T ss_dssp             -------------------------------CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC
T ss_pred             ccccccCCCCCccccccccccCChhhhhhhccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC
Confidence            344555556666667777777666665555544          68999999999999864 2    34699999886543


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceE
Q 013944          195 HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRV  272 (433)
Q Consensus       195 ~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~  272 (433)
                      .....                                     ++..|...+.+    +. ++  .+++++..  .....+
T Consensus        87 ~~~~~-------------------------------------~~~~E~~~l~~----l~-h~--~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           87 EKQRV-------------------------------------DFLGEAGIMGQ----FS-HH--NIIRLEGVISKYKPMM  122 (333)
T ss_dssp             HHHHH-------------------------------------HHHHHHHHHHT----CC-CT--TBCCEEEEECSSSSEE
T ss_pred             HHHHH-------------------------------------HHHHHHHHHHh----CC-CC--CCCcEEEEEecCCCcE
Confidence            21110                                     11223333322    22 22  23344433  235679


Q ss_pred             EEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEE
Q 013944          273 LTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIG  352 (433)
Q Consensus       273 LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~  352 (433)
                      +||||++|++|.+++....+.       +++..       + ..+..+++.+|.+||+.|++|+|+||+||+++.++.++
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~-------~~~~~-------~-~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~k  187 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGE-------FSVLQ-------L-VGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCK  187 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTC-------SCHHH-------H-HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEE
T ss_pred             EEEeCCCCCcHHHHHHhCCCC-------CCHHH-------H-HHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEE
Confidence            999999999999998653210       11111       1 23556788899999999999999999999999999999


Q ss_pred             EEecccccccCHH
Q 013944          353 FLDFGLLCRMERK  365 (433)
Q Consensus       353 l~DFGl~~~l~~~  365 (433)
                      |+|||++..+...
T Consensus       188 l~Dfg~~~~~~~~  200 (333)
T 1mqb_A          188 VSDFGLSRVLEDD  200 (333)
T ss_dssp             ECCCCC-------
T ss_pred             ECCCCcchhhccc
Confidence            9999999877543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.79  E-value=5.8e-20  Score=181.35  Aligned_cols=153  Identities=14%  Similarity=0.184  Sum_probs=115.6

Q ss_pred             ccCCccccccccceeEEEEec---------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 013944          159 FISEEPVAAASFGQVYRGSTL---------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELG  229 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~---------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~  229 (433)
                      |...+.||+|++|.||+|+..         +|+.||||+.+..  +.+..++.+++.                       
T Consensus        44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~-----------------------   98 (352)
T 2jii_A           44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQR-----------------------   98 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHH-----------------------
T ss_pred             EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHH-----------------------
Confidence            445578999999999999964         3899999998754  344555555542                       


Q ss_pred             HHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeeccc---CCceEEEeeccCCCCcchhhhhc--cCCCCCCCCchhhh
Q 013944          230 KGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYL---SRKRVLTMEWMVGESPTDLISLS--TGSSVDGSSTHLDR  304 (433)
Q Consensus       230 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LVmE~i~G~~L~~~l~~~--~~~~~~~~~~~~~~  304 (433)
                                ..+.|+.++.+.+...+...+|.++...   ....++||||+ |++|.+++...  ...+        +.
T Consensus        99 ----------l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~--------~~  159 (352)
T 2jii_A           99 ----------AAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLS--------ER  159 (352)
T ss_dssp             ----------HCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCC--------HH
T ss_pred             ----------hcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCC--------HH
Confidence                      2466888888888777777778777543   35679999999 99999998754  1111        11


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC--cEEEEecccccccC
Q 013944          305 QKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG--QIGFLDFGLLCRME  363 (433)
Q Consensus       305 ~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g--~l~l~DFGl~~~l~  363 (433)
                      .        ...+..+++.+|.+||+.|++|+|+||+||+++.++  +++|+|||++..+.
T Consensus       160 ~--------~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~  212 (352)
T 2jii_A          160 S--------VLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYC  212 (352)
T ss_dssp             H--------HHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSS
T ss_pred             H--------HHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeecc
Confidence            1        123567788999999999999999999999999988  99999999997654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.79  E-value=1e-19  Score=179.71  Aligned_cols=147  Identities=20%  Similarity=0.232  Sum_probs=99.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +...+.||+|+||.||+|+. .+|+.||||+.+...... ..+...                                  
T Consensus        19 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~----------------------------------   63 (345)
T 1xjd_A           19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVEC----------------------------------   63 (345)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHH----------------------------------
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-hhhHHH----------------------------------
Confidence            33467899999999999996 479999999986321100 000000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+..    ..++++  +++++..  .....++||||++|++|.+++......+        +.        ...
T Consensus        64 ~~~E~~il~~----~~~hp~--iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~--------~~--------~~~  121 (345)
T 1xjd_A           64 TMVEKRVLSL----AWEHPF--LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD--------LS--------RAT  121 (345)
T ss_dssp             HHHHHHHHHH----HTTCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCC--------HH--------HHH
T ss_pred             HHHHHHHHHh----cCCCCC--CCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HH--------HHH
Confidence            0112222211    112232  3333332  2356799999999999999987543322        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||+++..
T Consensus       122 ~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A          122 FYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             HHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            35667888999999999999999999999999999999999998754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.79  E-value=4.2e-20  Score=180.31  Aligned_cols=146  Identities=18%  Similarity=0.240  Sum_probs=100.0

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.+....... .....                                  +
T Consensus         9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~----------------------------------~   53 (318)
T 1fot_A            9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL-KQVEH----------------------------------T   53 (318)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT-TCHHH----------------------------------H
T ss_pred             EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-hHHHH----------------------------------H
Confidence            3457899999999999996 4899999999863211000 00000                                  0


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+    ..+. ++  .+++++..+  ....++||||++|++|.+++......+        +.        ....
T Consensus        54 ~~E~~~l----~~l~-hp--~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~--------~~--------~~~~  110 (318)
T 1fot_A           54 NDERLML----SIVT-HP--FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP--------NP--------VAKF  110 (318)
T ss_dssp             HHHHHHH----HSCC-BT--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCC--------HH--------HHHH
T ss_pred             HHHHHHH----hhCC-CC--CCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCC--------HH--------HHHH
Confidence            1122211    1221 22  234444332  356799999999999999987543322        11        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++....
T Consensus       111 ~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~  157 (318)
T 1fot_A          111 YAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP  157 (318)
T ss_dssp             HHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             HHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecC
Confidence            56678889999999999999999999999999999999999987654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.79  E-value=2.5e-20  Score=177.71  Aligned_cols=144  Identities=19%  Similarity=0.163  Sum_probs=98.4

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|+||.||+|+..++..||||+.+......  .                                     ++.
T Consensus        27 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~-------------------------------------~~~   67 (283)
T 3gen_A           27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--D-------------------------------------EFI   67 (283)
T ss_dssp             EEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCH--H-------------------------------------HHH
T ss_pred             HhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH--H-------------------------------------HHH
Confidence            3457899999999999998888899999987643221  0                                     011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|.+.+.+    +. ++  .+++++..+  ....++||||++|++|.+++......       +++..        ...+
T Consensus        68 ~E~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~--------~~~i  125 (283)
T 3gen_A           68 EEAKVMMN----LS-HE--KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-------FQTQQ--------LLEM  125 (283)
T ss_dssp             HHHHHHHT----CC-CT--TBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGC-------CCHHH--------HHHH
T ss_pred             HHHHHHhc----CC-CC--CEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccC-------CCHHH--------HHHH
Confidence            22222222    22 22  234444432  35569999999999999998652210       11111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+..
T Consensus       126 ~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  172 (283)
T 3gen_A          126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD  172 (283)
T ss_dssp             HHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred             HHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence            66788899999999999999999999999999999999999986644

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.79  E-value=5.5e-19  Score=169.53  Aligned_cols=178  Identities=13%  Similarity=0.127  Sum_probs=115.3

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh-HhhhchHHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL-VGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l-~~Eld~~~E  241 (433)
                      +.||+|++|+||+|+..+|+.||||+.+++.... . +....+                 ..+  -...+ .....+..|
T Consensus        96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~-~-~~~~~~-----------------~~~--~~~w~~~~~~~~~~E  154 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSF-K-KVKEKR-----------------DYG--DLHFSVLAIRSARNE  154 (282)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC--------CCCC--------------------------CHHHHHHHHHHHH
T ss_pred             CEeccCCCceEEEEEeCCCCEEEEEEEECCCCch-h-hhhhhh-----------------hhc--chhhHHHHHHHHHHH
Confidence            7899999999999998789999999987643210 0 000000                 000  00000 011234556


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      ...+.++.      + +.+|.++..  +..++||||++|++|.+ +...            +.          ..+..++
T Consensus       155 ~~~l~~l~------~-~~v~~~~~~--~~~~lvmE~~~g~~L~~-l~~~------------~~----------~~i~~qi  202 (282)
T 1zar_A          155 FRALQKLQ------G-LAVPKVYAW--EGNAVLMELIDAKELYR-VRVE------------NP----------DEVLDMI  202 (282)
T ss_dssp             HHHHHHTT------T-SSSCCEEEE--ETTEEEEECCCCEEGGG-CCCS------------CH----------HHHHHHH
T ss_pred             HHHHHhcc------C-CCcCeEEec--cceEEEEEecCCCcHHH-cchh------------hH----------HHHHHHH
Confidence            66665553      2 566776643  55699999999999988 3210            00          1255678


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHH-HhcCCCCCCCC
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSL-TEMDVVRPGTN  400 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l-~~~g~~~~~~d  400 (433)
                      +.++.++|+.|++|+|+||+||+++ +|.++|+|||++...+......+       ..+|...+...+ ...|.   ..|
T Consensus       203 ~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~~~~~a~e~-------l~rdv~~i~~~f~~~~~~---~~~  271 (282)
T 1zar_A          203 LEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEEGWREI-------LERDVRNIITYFSRTYRT---EKD  271 (282)
T ss_dssp             HHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEETTSTTHHHH-------HHHHHHHHHHHHHHHHCC---CCC
T ss_pred             HHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeECCCCCHHHH-------HHHHHHHHHHHHHHhcCC---CCC
Confidence            8899999999999999999999999 99999999999998876544333       345666666666 34453   235


Q ss_pred             hHHH
Q 013944          401 TLRV  404 (433)
Q Consensus       401 ~~~~  404 (433)
                      .+.+
T Consensus       272 ~~~~  275 (282)
T 1zar_A          272 INSA  275 (282)
T ss_dssp             HHHH
T ss_pred             hHHH
Confidence            5543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.79  E-value=2.4e-20  Score=176.63  Aligned_cols=145  Identities=21%  Similarity=0.205  Sum_probs=101.7

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|++|.||+|+..+++.||||+.+......  .                                     ++.
T Consensus        13 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~-------------------------------------~~~   53 (269)
T 4hcu_A           13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--E-------------------------------------DFI   53 (269)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH--H-------------------------------------HHH
T ss_pred             eeeheecCCCccEEEEEEecCCCeEEEEEecccccCH--H-------------------------------------HHH
Confidence            3456899999999999998889999999987643221  0                                     012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +. ++  ++++++..+  ....++||||++|++|.+++....+.       +++..       + ..+
T Consensus        54 ~E~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~-------~-~~i  111 (269)
T 4hcu_A           54 EEAEVMMK----LS-HP--KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-------FAAET-------L-LGM  111 (269)
T ss_dssp             HHHHHHHT----CC-CT--TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTC-------CCHHH-------H-HHH
T ss_pred             HHHHHHHh----CC-CC--CEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcc-------cCHHH-------H-HHH
Confidence            23322222    22 22  234444332  35679999999999999998643221       11111       1 224


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..++.+||+.|++|+|+||+||+++.++.++|+|||++......
T Consensus       112 ~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  159 (269)
T 4hcu_A          112 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  159 (269)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred             HHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence            567888999999999999999999999999999999999999866543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.79  E-value=1.2e-19  Score=181.01  Aligned_cols=148  Identities=22%  Similarity=0.255  Sum_probs=95.6

Q ss_pred             ccCCccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          159 FISEEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      +...+.||+|+||+||+|+.+    +|..||||+.+.+.......                                   
T Consensus        47 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~-----------------------------------   91 (373)
T 2qol_A           47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR-----------------------------------   91 (373)
T ss_dssp             CCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHH-----------------------------------
T ss_pred             ceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHH-----------------------------------
Confidence            445678999999999999864    57889999988654322110                                   


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                        +|..|+..+.+    +. ++  ++++++..+  ....++||||++|++|.+++......       ++..+       
T Consensus        92 --~~~~E~~~l~~----l~-h~--niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~-------~~~~~-------  148 (373)
T 2qol_A           92 --DFLGEASIMGQ----FD-HP--NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQ-------  148 (373)
T ss_dssp             --HHHHHHHHHTT----CC-CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTC-------SCHHH-------
T ss_pred             --HHHHHHHHHHh----CC-CC--CCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCC-------CCHHH-------
Confidence              11223332222    22 22  334444332  35679999999999999998643210       11111       


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      + ..+..+++.+|.+||+.|++|+|+||+||+++.++.++|+|||+++.+...
T Consensus       149 ~-~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          149 L-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             H-HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             H-HHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence            1 235667889999999999999999999999999999999999999877543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.79  E-value=1.3e-19  Score=178.21  Aligned_cols=144  Identities=17%  Similarity=0.186  Sum_probs=98.7

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+.+.....  ..+                   ...              .+.
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~--~~~-------------------~~~--------------~~~   53 (337)
T 1o6l_A            9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII--AKD-------------------EVA--------------HTV   53 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HTT-------------------CHH--------------HHH
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh--hhh-------------------HHH--------------HHH
Confidence            456899999999999996 47999999998632110  000                   000              011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.    .+. ++  .+++++..  .....++||||++|++|.+++......+        +.        ....+
T Consensus        54 ~E~~~l~----~l~-hp--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~--------~~--------~~~~~  110 (337)
T 1o6l_A           54 TESRVLQ----NTR-HP--FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE--------RARFY  110 (337)
T ss_dssp             HHHHHHH----SCC-CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCC--------HH--------HHHHH
T ss_pred             HHHHHHH----hCC-CC--cCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCC--------HH--------HHHHH
Confidence            2222221    222 22  23333333  2356799999999999998887543322        11        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||+++..
T Consensus       111 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A          111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             HHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            667888999999999999999999999999999999999998753

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.79  E-value=4.1e-21  Score=191.59  Aligned_cols=152  Identities=22%  Similarity=0.251  Sum_probs=98.1

Q ss_pred             hhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          153 VESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       153 ~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      ..+.|.....+.||+|+||+||+|+. .+|+.||||+.+......    ...                            
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~----~~~----------------------------  132 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD----KEE----------------------------  132 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHH----HHH----------------------------
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccccc----HHH----------------------------
Confidence            44445555567899999999999996 589999999987643211    001                            


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                            +..|...+.+    +. ++  .+++++..  .....+|||||++|++|.+++.....       .+++..    
T Consensus       133 ------~~~E~~~l~~----l~-hp--nIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~-------~l~~~~----  188 (373)
T 2x4f_A          133 ------VKNEISVMNQ----LD-HA--NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY-------NLTELD----  188 (373)
T ss_dssp             ------HHHHHHHHTT----CC-CT--TBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGG-------GCCHHH----
T ss_pred             ------HHHHHHHHHh----CC-CC--CCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCC-------CCCHHH----
Confidence                  1223322222    21 22  23444433  34567999999999999888754321       011111    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEE--ccCCcEEEEecccccccCH
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY--TSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv--~~~g~l~l~DFGl~~~l~~  364 (433)
                          ...+..+++.+|.+||+.|++|+|+||+||++  +.+++++|+|||++..+..
T Consensus       189 ----~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~  241 (373)
T 2x4f_A          189 ----TILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP  241 (373)
T ss_dssp             ----HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred             ----HHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence                12356678899999999999999999999999  4567999999999987643

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.78  E-value=6.7e-21  Score=193.98  Aligned_cols=145  Identities=14%  Similarity=0.156  Sum_probs=98.9

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+.+ +|+.||||+.+.....  . .                                ...-.+.
T Consensus        78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~--~-~--------------------------------~~~~~~~  122 (437)
T 4aw2_A           78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML--K-R--------------------------------AETACFR  122 (437)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH--H-T--------------------------------TTTCCHH
T ss_pred             EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh--h-H--------------------------------HHHHHHH
Confidence            4578999999999999974 6899999998531000  0 0                                0001123


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .|...+..    . ++++  +.+++..  .....+|||||++|++|.+++.... .++        +.        ....
T Consensus       123 ~E~~il~~----~-~hp~--Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~--------e~--------~~~~  179 (437)
T 4aw2_A          123 EERDVLVN----G-DSKW--ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP--------EE--------MARF  179 (437)
T ss_dssp             HHHHHHHH----S-CTTT--BCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCC--------HH--------HHHH
T ss_pred             HHHHHHHh----C-CCCC--EEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCC--------HH--------HHHH
Confidence            33333222    2 2222  3333332  3456799999999999999987521 111        11        1234


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.+||+.|++|||+||+|||++.+|.++|+|||+++.+.
T Consensus       180 ~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~  226 (437)
T 4aw2_A          180 YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM  226 (437)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcc
Confidence            56678889999999999999999999999999999999999987653

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.78  E-value=1.7e-19  Score=181.20  Aligned_cols=145  Identities=18%  Similarity=0.197  Sum_probs=99.2

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.+...... ..+...+                                  
T Consensus        55 ~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-~~~~~~~----------------------------------   99 (396)
T 4dc2_A           55 DLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-DEDIDWV----------------------------------   99 (396)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHH----------------------------------
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHHHH----------------------------------
Confidence            3456899999999999996 478999999986432111 0000001                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.++    .++++  +++++..  .....+|||||++|++|.+++.....++        +.        ....
T Consensus       100 ~~E~~il~~~----~~hp~--Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~--------~~--------~~~~  157 (396)
T 4dc2_A          100 QTEKHVFEQA----SNHPF--LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--------EE--------HARF  157 (396)
T ss_dssp             HHHHHHHHHH----TTCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCC--------HH--------HHHH
T ss_pred             HHHHHHHHhc----CCCCC--cCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCC--------HH--------HHHH
Confidence            1122222111    12232  3333332  3456799999999999998887544332        11        1234


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      +..++..+|.+||+.|++|||+||+|||++.+|.++|+|||+++.
T Consensus       158 ~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          158 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             HHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             HHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence            566788899999999999999999999999999999999999875

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.78  E-value=1.3e-19  Score=179.39  Aligned_cols=147  Identities=19%  Similarity=0.199  Sum_probs=99.5

Q ss_pred             ccCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +...+.||+|+||+||+|+.+ +|+.||||+.+...... ..+...                                  
T Consensus        22 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~----------------------------------   66 (353)
T 2i0e_A           22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVEC----------------------------------   66 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH-TTCHHH----------------------------------
T ss_pred             cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc-chHHHH----------------------------------
Confidence            334578999999999999964 68999999986321100 000000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+    ....++++  +++++..  .....++||||++|++|.+++......+        +.        ...
T Consensus        67 ~~~E~~~l----~~~~~hp~--iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~--------~~--------~~~  124 (353)
T 2i0e_A           67 TMVEKRVL----ALPGKPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK--------EP--------HAV  124 (353)
T ss_dssp             HHHHHHHH----TCTTCCTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCC--------HH--------HHH
T ss_pred             HHHHHHHH----HhcCCCCE--EeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCC--------HH--------HHH
Confidence            01122111    11222333  3344433  3356799999999999999887543322        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..++..+|.+||+.|++|||+||+||+++.+|.++|+|||++...
T Consensus       125 ~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A          125 FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             HHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            35667888999999999999999999999999999999999998753

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.78  E-value=8e-20  Score=180.71  Aligned_cols=178  Identities=19%  Similarity=0.161  Sum_probs=113.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.++.....    .                 ....              .
T Consensus        43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~-----------------~~~~--------------~   87 (350)
T 1rdq_E           43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK----L-----------------KQIE--------------H   87 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----T-----------------TCHH--------------H
T ss_pred             CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc----H-----------------HHHH--------------H
Confidence            34457899999999999996 489999999985321100    0                 0000              0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+    ..+   .+-.+++++..  .....++||||++|++|.+++......+        +.        ...
T Consensus        88 ~~~E~~~l----~~l---~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~--------~~--------~~~  144 (350)
T 1rdq_E           88 TLNEKRIL----QAV---NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--------EP--------HAR  144 (350)
T ss_dssp             HHHHHHHH----TTC---CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCC--------HH--------HHH
T ss_pred             HHHHHHHH----HhC---CCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCC--------HH--------HHH
Confidence            11222221    112   22233444433  2356799999999999999987543322        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH----------HHHHHHHHHHHhcCHHHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ----------FAMLASIVHIVNGDWQSL  385 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~----------~~~~~~~~~~~~~d~~~~  385 (433)
                      .+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+.....          +.++..-......|+|++
T Consensus       145 ~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  224 (350)
T 1rdq_E          145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWAL  224 (350)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecc
Confidence            3566788899999999999999999999999999999999999986543210          011100001224577777


Q ss_pred             HHHHHhcCC
Q 013944          386 VHSLTEMDV  394 (433)
Q Consensus       386 ~~~l~~~g~  394 (433)
                      +..+++|-.
T Consensus       225 G~il~ell~  233 (350)
T 1rdq_E          225 GVLIYEMAA  233 (350)
T ss_dssp             HHHHHHHHH
T ss_pred             cHhHhHHhh
Confidence            777777643

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.78  E-value=1.6e-19  Score=178.24  Aligned_cols=147  Identities=19%  Similarity=0.204  Sum_probs=100.3

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +...+.||+|+||.||+|+. .+|+.||||+.+...... ..+...+                                 
T Consensus        11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~---------------------------------   56 (345)
T 3a8x_A           11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND-DEDIDWV---------------------------------   56 (345)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS-HHHHHHH---------------------------------
T ss_pred             eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc-hHHHHHH---------------------------------
Confidence            33457899999999999996 478999999986432111 0011111                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       ..|...+.    .+.++++  +++++..  .....++||||++|++|.+++......+        +.        ...
T Consensus        57 -~~E~~~l~----~~~~hp~--iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~--------~~--------~~~  113 (345)
T 3a8x_A           57 -QTEKHVFE----QASNHPF--LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--------EE--------HAR  113 (345)
T ss_dssp             -HHHHHHHH----HTTTCTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCC--------HH--------HHH
T ss_pred             -HHHHHHHH----hcCCCCc--cCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HH--------HHH
Confidence             11221111    1212333  3333332  3356799999999999999887543322        11        122


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||+++..
T Consensus       114 ~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A          114 FYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            35667888999999999999999999999999999999999998753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.78  E-value=1.7e-20  Score=183.30  Aligned_cols=212  Identities=17%  Similarity=0.129  Sum_probs=128.8

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+..........   .                                  .+
T Consensus        10 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---~----------------------------------~~   52 (323)
T 3tki_A           10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---E----------------------------------NI   52 (323)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------------------------------------CH
T ss_pred             eeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchH---H----------------------------------HH
Confidence            3457899999999999996 48999999987543211100   0                                  11


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+..    +. +++  +++++..  ..+..++||||++|++|.+++......+        +..        ...
T Consensus        53 ~~E~~~l~~----l~-hpn--Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~  109 (323)
T 3tki_A           53 KKEICINKM----LN-HEN--VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP--------EPD--------AQR  109 (323)
T ss_dssp             HHHHHHHHH----CC-CTT--BCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCC--------HHH--------HHH
T ss_pred             HHHHHHHHh----CC-CCC--CCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCC--------HHH--------HHH
Confidence            223222222    22 222  3333332  3356689999999999999886433222        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH---------------HHHHHHHH-HHHHhc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH---------------QFAMLASI-VHIVNG  380 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~---------------~~~~~~~~-~~~~~~  380 (433)
                      +..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+....               .......- ......
T Consensus       110 i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  189 (323)
T 3tki_A          110 FFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV  189 (323)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHH
T ss_pred             HHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcc
Confidence            55678889999999999999999999999999999999999987542110               01111100 013346


Q ss_pred             CHHHHHHHHHhcCCCCCCC----C-----------------hHHHHHHHHHHhhchhccCCCCCcccccccc
Q 013944          381 DWQSLVHSLTEMDVVRPGT----N-----------------TLRVTMDLEDALGEVEFKDGIPDVKFSRVRS  431 (433)
Q Consensus       381 d~~~~~~~l~~~g~~~~~~----d-----------------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~  431 (433)
                      |.|+++..+++|-......    +                 ...+...+.+++...+..+|-.+.++.+++.
T Consensus       190 DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            8888888888763222111    0                 0112234445555555556666666666653

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.78  E-value=1.5e-20  Score=186.77  Aligned_cols=147  Identities=19%  Similarity=0.191  Sum_probs=99.2

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHH--HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVR--DIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~--Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+.........  +...                                  
T Consensus        16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~----------------------------------   61 (361)
T 2yab_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREE----------------------------------   61 (361)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHH----------------------------------
T ss_pred             EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHH----------------------------------
Confidence            356899999999999996 479999999876532210000  0000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+. ++  .+++++..  .....++||||++|++|.+++......+        +..        ..
T Consensus        62 ~~~E~~il~----~l~-hp--nIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~--------~~~--------~~  118 (361)
T 2yab_A           62 IEREVSILR----QVL-HP--NIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS--------EEE--------AT  118 (361)
T ss_dssp             HHHHHHHHT----TCC-CT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCB--------HHH--------HH
T ss_pred             HHHHHHHHH----hCC-Cc--CCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCC--------HHH--------HH
Confidence            111222211    121 22  23344433  2356799999999999999986533222        221        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCC----cEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----QIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g----~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.++    .++|+|||++..+..
T Consensus       119 ~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~  171 (361)
T 2yab_A          119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (361)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence            3566788899999999999999999999998776    799999999987654

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.78  E-value=9.6e-21  Score=191.39  Aligned_cols=147  Identities=16%  Similarity=0.168  Sum_probs=100.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||+||+|+. .+|+.||||+.+.....  ..                                 ...-.+
T Consensus        64 ~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~--~~---------------------------------~~~~~~  108 (412)
T 2vd5_A           64 EILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML--KR---------------------------------GEVSCF  108 (412)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--HH---------------------------------GGGCCH
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh--hH---------------------------------HHHHHH
Confidence            3457899999999999996 48999999998531100  00                                 000112


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhhhHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      ..|...+..    . ++++  +++++..+  ....+|||||++|++|.+++.... ..+        +.        ...
T Consensus       109 ~~E~~il~~----~-~hp~--Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~--------~~--------~~~  165 (412)
T 2vd5_A          109 REERDVLVN----G-DRRW--ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIP--------AE--------MAR  165 (412)
T ss_dssp             HHHHHHHHH----S-CTTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCC--------HH--------HHH
T ss_pred             HHHHHHHHh----c-CCCC--eeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCC--------HH--------HHH
Confidence            223332222    1 1222  33333332  356799999999999999987532 121        11        122


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||+.|++|||+||+||+++.+|.++|+|||++..+..
T Consensus       166 ~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~  214 (412)
T 2vd5_A          166 FYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA  214 (412)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence            3556788899999999999999999999999999999999999876643

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.78  E-value=1.5e-18  Score=164.17  Aligned_cols=186  Identities=20%  Similarity=0.231  Sum_probs=118.1

Q ss_pred             CccccccccceeEEEEe-cCCCE--EEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          162 EEPVAAASFGQVYRGST-LDGSI--VAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~--VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      .++||+|++|+||+|+. .+|+.  ||||+.++.....-..+ ..+.       . ..+..+..     ....-..+..+
T Consensus        52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~-~~~~-------~-~~~~~~~~-----~~~~~~~~~~~  117 (258)
T 1zth_A           52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMD-EYLY-------G-DERFDMRR-----ISPKEKVFIWT  117 (258)
T ss_dssp             EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------G-GGTT-------T-CTTSCC---------CHHHHHHHH
T ss_pred             CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHH-Hhhc-------c-cchhhhhc-----cChHHHHHHHH
Confidence            46899999999999997 78999  99999876532100000 0000       0 00000000     00001122345


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCC-C----CcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVG-E----SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G-~----~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      ..|++++.++...     .+.+|.++..  ...+|||||+.+ +    +|.+.....           ++..       .
T Consensus       118 ~~E~~~l~~l~~~-----~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~~-----------~~~~-------~  172 (258)
T 1zth_A          118 EKEFRNLERAKEA-----GVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGREL-----------KELD-------V  172 (258)
T ss_dssp             HHHHHHHHHHHHT-----TCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGGG-----------GGSC-------H
T ss_pred             HHHHHHHHHHHhC-----CCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhcc-----------ChHH-------H
Confidence            6788888888653     3567777753  567999999942 3    444432210           0000       1


Q ss_pred             HHHHHHHHHHHHHHHH-HCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhc
Q 013944          314 LDLVNKGVEATLVQLL-ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh-~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~  392 (433)
                       ..+..++..++.++| ..|++|+|+||+|||+++  +++|+|||++...+......       .+..|...+...+..+
T Consensus       173 -~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~~~~~~~-------~l~rd~~~~~~~f~~~  242 (258)
T 1zth_A          173 -EGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLRHPMAES-------YLERDVRNIIRFFSKY  242 (258)
T ss_dssp             -HHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHTT
T ss_pred             -HHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCCCccHHH-------HHHHHHHHHHHHHHHc
Confidence             124566788999999 999999999999999987  99999999999886554333       3456888888888788


Q ss_pred             CCCC
Q 013944          393 DVVR  396 (433)
Q Consensus       393 g~~~  396 (433)
                      |+..
T Consensus       243 g~~~  246 (258)
T 1zth_A          243 GVKA  246 (258)
T ss_dssp             TCCC
T ss_pred             CCCC
Confidence            8754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.78  E-value=1.4e-19  Score=184.58  Aligned_cols=146  Identities=16%  Similarity=0.109  Sum_probs=98.3

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.++..... ..+..                                  .+
T Consensus       151 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~----------------------------------~~  195 (446)
T 4ejn_A          151 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDEVA----------------------------------HT  195 (446)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------------------------------------
T ss_pred             EEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh-hHHHH----------------------------------HH
Confidence            3457899999999999995 589999999986321100 00000                                  00


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|.       ..+....+-.++.++..  .....+|||||++|++|.+++.....++        +.        ....
T Consensus       196 ~~e~-------~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------~~~~  252 (446)
T 4ejn_A          196 LTEN-------RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS--------ED--------RARF  252 (446)
T ss_dssp             ------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCC--------HH--------HHHH
T ss_pred             HHHH-------HHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCC--------HH--------HHHH
Confidence            1111       12222222234444433  2356799999999999998886544332        11        1123


Q ss_pred             HHHHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..+|.|||+ .|++|+|+||+||+++.+|.++|+|||+++...
T Consensus       253 ~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             HHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            56678889999998 999999999999999999999999999987643

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.78  E-value=1.2e-19  Score=176.26  Aligned_cols=147  Identities=23%  Similarity=0.241  Sum_probs=95.2

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|+||.||+|+. +|+.||||+........-  ....                                  +..
T Consensus        41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~--~~~~----------------------------------~~~   83 (309)
T 3p86_A           41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAE--RVNE----------------------------------FLR   83 (309)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHH--HHHH----------------------------------HHH
T ss_pred             eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHH--HHHH----------------------------------HHH
Confidence            356899999999999986 789999999875432110  0000                                  122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.++    . ++  .+++++..+  ....++||||++|++|.+++.....           ...+....  ...+.
T Consensus        84 E~~~l~~l----~-hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~--~~~i~  143 (309)
T 3p86_A           84 EVAIMKRL----R-HP--NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA-----------REQLDERR--RLSMA  143 (309)
T ss_dssp             HHHHHHHC----C-CT--TBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTH-----------HHHSCHHH--HHHHH
T ss_pred             HHHHHHhC----C-CC--CEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCC-----------CCCCCHHH--HHHHH
Confidence            33333322    2 22  233444332  3456999999999999998864311           00111111  12356


Q ss_pred             HHHHHHHHHHHHCC--ccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETG--ILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~g--ivH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+++.++.+||+.|  ++|+|+||+||+++.++.++|+|||++.....
T Consensus       144 ~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             HHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred             HHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence            67889999999999  99999999999999999999999999875543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.78  E-value=3.1e-19  Score=177.03  Aligned_cols=156  Identities=17%  Similarity=0.262  Sum_probs=103.3

Q ss_pred             ccCCccccccccceeEEEEecC------CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          159 FISEEPVAAASFGQVYRGSTLD------GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~------G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      |...+.||+|+||.||+|+.++      ++.||||+.+.... ....++.+++.+       ..                
T Consensus        37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~-------~~----------------   92 (364)
T 3op5_A           37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG-PLFTELKFYQRA-------AK----------------   92 (364)
T ss_dssp             EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH-HHHHHHHHHHHH-------CC----------------
T ss_pred             EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch-hHHHHHHHHHhh-------hh----------------
Confidence            3446789999999999998743      58899999876533 233344433321       00                


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhh
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQK  306 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~  306 (433)
                               ...+..+ .......+..+++++..+.      ...+|||||+ |++|.+++....+.       +++.. 
T Consensus        93 ---------~~~~~e~-~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~-------l~~~~-  153 (364)
T 3op5_A           93 ---------PEQIQKW-IRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKR-------FSRKT-  153 (364)
T ss_dssp             ---------HHHHHHH-HHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSC-------CCHHH-
T ss_pred             ---------hHHHHHH-HHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCC-------CCHHH-
Confidence                     0011111 1122334445666665432      2369999999 99999998753210       11111 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc--cCCcEEEEecccccccCH
Q 013944          307 LDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT--SSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       307 ~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~--~~g~l~l~DFGl~~~l~~  364 (433)
                             ...+..+++.+|.+||+.|++|+|+||+||+++  .++.++|+|||+++.+..
T Consensus       154 -------~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~  206 (364)
T 3op5_A          154 -------VLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP  206 (364)
T ss_dssp             -------HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSG
T ss_pred             -------HHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceeccc
Confidence                   123567788999999999999999999999999  889999999999976543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.77  E-value=2.7e-20  Score=181.96  Aligned_cols=146  Identities=18%  Similarity=0.208  Sum_probs=98.9

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHH--HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVR--DIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~--Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+.........  +...                                  
T Consensus        15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~----------------------------------   60 (326)
T 2y0a_A           15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----------------------------------   60 (326)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHH----------------------------------
T ss_pred             eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHH----------------------------------
Confidence            456899999999999996 479999999876432110000  0000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.+    +. +++  +++++..  .....++||||++|++|.+++......+        +..        ..
T Consensus        61 ~~~E~~~l~~----l~-hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~  117 (326)
T 2y0a_A           61 IEREVSILKE----IQ-HPN--VITLHEVYENKTDVILILELVAGGELFDFLAEKESLT--------EEE--------AT  117 (326)
T ss_dssp             HHHHHHHHHH----CC-CTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCB--------HHH--------HH
T ss_pred             HHHHHHHHHh----CC-CCC--CCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcC--------HHH--------HH
Confidence            1122222222    22 222  3333332  3456799999999999999986433221        211        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCC----cEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----QIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g----~l~l~DFGl~~~l~  363 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.++    .++|+|||++..+.
T Consensus       118 ~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  169 (326)
T 2y0a_A          118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID  169 (326)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence            3566788899999999999999999999998877    89999999998764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.77  E-value=1.4e-19  Score=185.06  Aligned_cols=194  Identities=15%  Similarity=0.192  Sum_probs=110.7

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.........  +..-+                                 
T Consensus        55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~~~~---------------------------------   99 (458)
T 3rp9_A           55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI--DCKRI---------------------------------   99 (458)
T ss_dssp             EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHH--HHHHH---------------------------------
T ss_pred             eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHH--HHHHH---------------------------------
Confidence            33456899999999999985 5899999998865432211  11111                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc-------CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL-------SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-------~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                       ..|...+.++    .+ +  .+.+++..+       ....++||||++ ++|.+++.....++        +.      
T Consensus       100 -~~E~~~l~~l----~h-~--niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~--------~~------  156 (458)
T 3rp9_A          100 -LREIAILNRL----NH-D--HVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLT--------EL------  156 (458)
T ss_dssp             -HHHHHHHHHC----CC-T--TBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSCCCC--------HH------
T ss_pred             -HHHHHHHHhC----CC-C--CCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccCCCCC--------HH------
Confidence             1222222222    21 2  223333222       145699999986 57887776433222        11      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH-------------H---------
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ-------------F---------  368 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~-------------~---------  368 (433)
                        ....+..++..+|.|||+.|++|||+||+|||++.+|.++|+|||+++.+.....             .         
T Consensus       157 --~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (458)
T 3rp9_A          157 --HIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTK  234 (458)
T ss_dssp             --HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC-----------------
T ss_pred             --HHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccc
Confidence              1234567788999999999999999999999999999999999999987642110             0         


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHhcCCCCCCCChHHHHHHHHHHh
Q 013944          369 AMLASIVHIVNGDWQSLVHSLTEMDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       369 ~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      .........+..-++...+.+..-+.....+|+|+++-.+.+++
T Consensus       235 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ell  278 (458)
T 3rp9_A          235 NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL  278 (458)
T ss_dssp             ----------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred             cccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHH
Confidence            00001111111222233333434444677889999999888888

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.77  E-value=6.2e-20  Score=182.15  Aligned_cols=141  Identities=18%  Similarity=0.134  Sum_probs=96.7

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR--HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~--~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+...+..  +.+.+                                    
T Consensus        22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~------------------------------------   65 (361)
T 3uc3_A           22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQR------------------------------------   65 (361)
T ss_dssp             EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHH------------------------------------
T ss_pred             EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHH------------------------------------
Confidence            34457899999999999996 4899999998865322  22222                                    


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                           |...+.+    +. +++  +++++..  ..+..++||||++|++|.+++......+        +.        .
T Consensus        66 -----E~~~l~~----l~-hpn--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------~  117 (361)
T 3uc3_A           66 -----EIINHRS----LR-HPN--IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFS--------ED--------E  117 (361)
T ss_dssp             -----HHHHHHH----CC-CTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCC--------HH--------H
T ss_pred             -----HHHHHHh----CC-CCC--CCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCC--------HH--------H
Confidence                 2222222    22 222  2333332  3456799999999999999886544332        11        1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc--EEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ--IGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~--l~l~DFGl~~~l~  363 (433)
                      ...+..++..++.+||+.|++|+|+||+||+++.++.  ++|+|||+++...
T Consensus       118 ~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~  169 (361)
T 3uc3_A          118 ARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV  169 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence            1235677888999999999999999999999987665  9999999987543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.77  E-value=1.1e-18  Score=168.71  Aligned_cols=194  Identities=15%  Similarity=0.125  Sum_probs=119.1

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +...+.||+|+||+||+|+. .+|+.||+|+.........    ..                                  
T Consensus        12 ~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~----~~----------------------------------   53 (310)
T 3s95_A           12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ----RT----------------------------------   53 (310)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHH----HH----------------------------------
T ss_pred             eeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHH----HH----------------------------------
Confidence            34467899999999999996 5799999998754322110    00                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|+..+.+    +.   +-++++++..  .....++||||++|++|.+++....+.       +++...        .
T Consensus        54 ~~~E~~~l~~----l~---hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~--------~  111 (310)
T 3s95_A           54 FLKEVKVMRC----LE---HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ-------YPWSQR--------V  111 (310)
T ss_dssp             HHHHHHHHTT----CC---CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTT-------SCHHHH--------H
T ss_pred             HHHHHHHHHh----CC---CcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCC-------CCHHHH--------H
Confidence            1223332222    22   2233444433  235679999999999999998753211       111111        2


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHH-HHHH-------HHhcCHHHHHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLA-SIVH-------IVNGDWQSLVH  387 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~-~~~~-------~~~~d~~~~~~  387 (433)
                      .+..+++.+|.+||+.|++|+|+||+||+++.++.++|+|||++..+.......... ....       ...+....++.
T Consensus       112 ~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  191 (310)
T 3s95_A          112 SFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP  191 (310)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCH
Confidence            355678889999999999999999999999999999999999998876543211000 0000       01122223333


Q ss_pred             HHHhcCCCCCCCChHHHHHHHHHHh
Q 013944          388 SLTEMDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       388 ~l~~~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      ....-+...+..|+++++..+.+++
T Consensus       192 E~~~~~~~~~~~Di~slG~~l~el~  216 (310)
T 3s95_A          192 EMINGRSYDEKVDVFSFGIVLCEII  216 (310)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCCCcHHHHHHHHHHHHHHh
Confidence            3333344455667777777666666

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.77  E-value=3.4e-19  Score=173.32  Aligned_cols=147  Identities=20%  Similarity=0.202  Sum_probs=100.9

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      |...+.||+|+||.||+|+.++|+.||||+..+.......    .+                                  
T Consensus        41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----~~----------------------------------   82 (321)
T 2qkw_B           41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIE----EF----------------------------------   82 (321)
T ss_dssp             CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHH----HH----------------------------------
T ss_pred             cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHH----HH----------------------------------
Confidence            3346689999999999999888999999998765332110    01                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.    .+   .+-++++++..+  ....++||||++|++|.+++.......    ...+....        ..
T Consensus        83 ~~E~~~l~----~l---~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~~--------~~  143 (321)
T 2qkw_B           83 ETEIETLS----FC---RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT----MSMSWEQR--------LE  143 (321)
T ss_dssp             HHHHHGGG----SC---CCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCS----CCCCHHHH--------HH
T ss_pred             HHHHHHHH----hC---CCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCc----cccCHHHH--------HH
Confidence            11222211    11   122334444332  356799999999999999886432110    01111111        12


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..+++.++.+||..|++|+|+||+||+++.++.++|+|||++...
T Consensus       144 i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          144 ICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKG  189 (321)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            5567888999999999999999999999999999999999998754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.77  E-value=4.5e-20  Score=179.18  Aligned_cols=144  Identities=23%  Similarity=0.284  Sum_probs=95.4

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|+||.||+|+..+|+.||||+.+......-  ....                                  +..
T Consensus        25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--~~~~----------------------------------~~~   68 (311)
T 3niz_A           25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEG--IPST----------------------------------AIR   68 (311)
T ss_dssp             EEEEEEECSSCEEEEEEETTSCEEEEEEEC------C--HHHH----------------------------------HHH
T ss_pred             hhhhccCCCCeEEEEEEECCCCEEEEEEEecccccch--hhHH----------------------------------HHH
Confidence            4568999999999999988899999999865322100  0000                                  112


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +. ++  .+++++..+  ....++||||++| ++.+.+......       +++..        ...+.
T Consensus        69 E~~~l~~----l~-hp--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~-------~~~~~--------~~~~~  125 (311)
T 3niz_A           69 EISLLKE----LH-HP--NIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG-------LQDSQ--------IKIYL  125 (311)
T ss_dssp             HHHHHHH----CC-CT--TBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTC-------CCHHH--------HHHHH
T ss_pred             HHHHHHH----cC-CC--CEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCC-------CCHHH--------HHHHH
Confidence            3222222    22 22  233444333  3456999999996 666666533210       11111        12356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       126 ~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A          126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             HHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            678889999999999999999999999999999999999998764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.77  E-value=1e-19  Score=181.46  Aligned_cols=146  Identities=18%  Similarity=0.152  Sum_probs=98.7

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +...+.||+|+||+||+|+. .+|+.||||+.+......-.....+                                  
T Consensus        40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~----------------------------------   85 (373)
T 2r5t_A           40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI----------------------------------   85 (373)
T ss_dssp             EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC------------------------------------------
T ss_pred             eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHH----------------------------------
Confidence            33457899999999999996 4789999999864321110000000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       ..|...      .++...+-.+++++..+  ....++||||++|++|.+++......+        +.        ...
T Consensus        86 -~~e~~~------ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~--------~~--------~~~  142 (373)
T 2r5t_A           86 -MSERNV------LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL--------EP--------RAR  142 (373)
T ss_dssp             ------C------CBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCC--------HH--------HHH
T ss_pred             -HHHHHH------HHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCC--------HH--------HHH
Confidence             001000      12222233344444433  356799999999999999887543322        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      .+..++..+|.+||+.|++|||+||+||+++.+|.++|+|||+++.
T Consensus       143 ~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          143 FYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            3566788899999999999999999999999999999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=2.5e-19  Score=177.31  Aligned_cols=143  Identities=18%  Similarity=0.239  Sum_probs=101.1

Q ss_pred             ccCCccccccccceeEEEEe----cCCCEEEEEEcCCCc-------hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHH
Q 013944          159 FISEEPVAAASFGQVYRGST----LDGSIVAVKVQRPNL-------RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADE  227 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l----~~G~~VAVKv~~p~~-------~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e  227 (433)
                      |...+.||+|+||+||+|+.    .+|+.||||+.+...       .+.+.                             
T Consensus        56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~-----------------------------  106 (355)
T 1vzo_A           56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR-----------------------------  106 (355)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCC-----------------------------
T ss_pred             eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHH-----------------------------
Confidence            44467899999999999996    378999999986432       11111                             


Q ss_pred             HHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhh
Q 013944          228 LGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQ  305 (433)
Q Consensus       228 ~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~  305 (433)
                                  .|...+.++.    ++++  +++++.  ......+|||||++|++|.+++......+        +. 
T Consensus       107 ------------~E~~~l~~l~----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~-  159 (355)
T 1vzo_A          107 ------------TERQVLEHIR----QSPF--LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT--------EH-  159 (355)
T ss_dssp             ------------CHHHHHHHHH----TCTT--BCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCC--------HH-
T ss_pred             ------------HHHHHHHHcc----CCCc--eeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCC--------HH-
Confidence                        1222222222    1222  223332  23456799999999999999987543322        11 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          306 KLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       306 ~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                             ....+..+++.+|.+||+.|++|+|+||+||+++.+|+++|+|||+++.+..
T Consensus       160 -------~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~  211 (355)
T 1vzo_A          160 -------EVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  211 (355)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             -------HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeeccc
Confidence                   1123556788899999999999999999999999999999999999987643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.77  E-value=5.3e-20  Score=179.23  Aligned_cols=148  Identities=22%  Similarity=0.277  Sum_probs=99.5

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      |...+.||+|+||.||+|+..+|+.||||+.+.......                                     +..+
T Consensus        32 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~~   74 (326)
T 3uim_A           32 FSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG-------------------------------------ELQF   74 (326)
T ss_dssp             SCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C-------------------------------------CCHH
T ss_pred             cccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH-------------------------------------HHHH
Confidence            345678999999999999988899999999875432110                                     0011


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.    .+.   +-++++++..  ..+..++||||++|++|.+++.......    ...+...        ...
T Consensus        75 ~~e~~~l~----~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~--------~~~  135 (326)
T 3uim_A           75 QTEVEMIS----MAV---HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ----PPLDWPK--------RQR  135 (326)
T ss_dssp             HHHHHGGG----TCC---CTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTC----CCCCHHH--------HHH
T ss_pred             HHHHHHHH----hcc---CCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccC----CCCCHHH--------HHH
Confidence            22222211    111   2223333332  2356799999999999999987543211    0011111        123


Q ss_pred             HHHHHHHHHHHHHHC---CccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLET---GILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~---givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..+++.++.+||+.   |++|+|+||+||+++.++.++|+|||++..+
T Consensus       136 i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  184 (326)
T 3uim_A          136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM  184 (326)
T ss_dssp             HHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             HHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcccccc
Confidence            566788899999999   9999999999999999999999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.77  E-value=2.2e-18  Score=176.02  Aligned_cols=144  Identities=19%  Similarity=0.159  Sum_probs=99.4

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCch-hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLR-HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~-~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. +|+.||||+.+.+.. +.+                                         .
T Consensus       197 ~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~~~~~~-----------------------------------------~  234 (450)
T 1k9a_A          197 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAF-----------------------------------------L  234 (450)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTEEEEEEEESSCTTSHHH-----------------------------------------H
T ss_pred             EEeeecCcCCeeEEEEEe-cCCeEEEEEeCCchHHHHH-----------------------------------------H
Confidence            356899999999999987 588999999876431 111                                         2


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .|++.+.+    +.+.+-+.+-.++..-....++||||++|++|.+++.......      .++..        ...+..
T Consensus       235 ~E~~~l~~----l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~------~~~~~--------~~~~~~  296 (450)
T 1k9a_A          235 AEASVMTQ----LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV------LGGDC--------LLKFSL  296 (450)
T ss_dssp             HHHHHHHT----CCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTT------CCHHH--------HHHHHH
T ss_pred             HHHHHHHh----ccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCC------CCHHH--------HHHHHH
Confidence            23333322    2222222222222222336799999999999999987543210      01111        123566


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +++.+|.+||+.|++|+|+||.||+++.+|.++|+|||+++....
T Consensus       297 qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  341 (450)
T 1k9a_A          297 DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  341 (450)
T ss_dssp             HHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             HHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence            788999999999999999999999999999999999999986654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.77  E-value=2.3e-20  Score=188.46  Aligned_cols=177  Identities=22%  Similarity=0.247  Sum_probs=113.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+.....  ..                                 ...-.
T Consensus        71 y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~--~~---------------------------------~~~~~  115 (410)
T 3v8s_A           71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI--KR---------------------------------SDSAF  115 (410)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--HT---------------------------------CCCST
T ss_pred             cEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh--hh---------------------------------HHHHH
Confidence            33457899999999999996 47899999997531000  00                                 00001


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+ ++++  +.+++..+  ....+|||||++|++|.+++... ..+        +.        ...
T Consensus       116 ~~~E~~il~----~l-~hp~--Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~-~~~--------e~--------~~~  171 (410)
T 3v8s_A          116 FWEERDIMA----FA-NSPW--VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVP--------EK--------WAR  171 (410)
T ss_dssp             HHHHHHHHH----HC-CCTT--BCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC-CCC--------HH--------HHH
T ss_pred             HHHHHHHHH----hC-CCCC--CCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC-CCC--------HH--------HHH
Confidence            122322222    12 2222  33444332  35679999999999999988642 111        11        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH--------------HHHHHHHH----HH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ--------------FAMLASIV----HI  377 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~--------------~~~~~~~~----~~  377 (433)
                      .+..++..+|.+||+.|++|||+||+||+++.+|.++|+|||++..+.....              +.++....    ..
T Consensus       172 ~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~  251 (410)
T 3v8s_A          172 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG  251 (410)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEE
T ss_pred             HHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCC
Confidence            3566788899999999999999999999999999999999999976543210              11111000    11


Q ss_pred             HhcCHHHHHHHHHhcCC
Q 013944          378 VNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       378 ~~~d~~~~~~~l~~~g~  394 (433)
                      ...|+|+++..+++|-.
T Consensus       252 ~~~DiwSlGvilyell~  268 (410)
T 3v8s_A          252 RECDWWSVGVFLYEMLV  268 (410)
T ss_dssp             THHHHHHHHHHHHHHHH
T ss_pred             CcceEecchHHHHHHHh
Confidence            24588888888888643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.77  E-value=8.2e-20  Score=174.98  Aligned_cols=145  Identities=18%  Similarity=0.231  Sum_probs=97.6

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|+||+||+|+..+|+.||||+.+......-.  ...                                  +.
T Consensus         5 ~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~--~~~----------------------------------~~   48 (288)
T 1ob3_A            5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGI--PST----------------------------------TI   48 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCC--CHH----------------------------------HH
T ss_pred             hhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccccccc--chh----------------------------------HH
Confidence            345689999999999999888999999988654321100  000                                  01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.    .+. ++  .+++++..  .....++||||++| +|.+++....+.       .++..        ...+
T Consensus        49 ~E~~~l~----~l~-h~--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~-------~~~~~--------~~~~  105 (288)
T 1ob3_A           49 REISILK----ELK-HS--NIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG-------LESVT--------AKSF  105 (288)
T ss_dssp             HHHHGGG----GCC-CT--TBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTC-------CCHHH--------HHHH
T ss_pred             HHHHHHH----hcC-CC--CEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccC-------CCHHH--------HHHH
Confidence            1221111    122 22  23344433  23567999999997 788777643211       11111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       106 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  151 (288)
T 1ob3_A          106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG  151 (288)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHC
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccC
Confidence            5678899999999999999999999999999999999999987664

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.77  E-value=1.3e-18  Score=176.90  Aligned_cols=193  Identities=12%  Similarity=0.109  Sum_probs=119.9

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.+.......  +...                                  +
T Consensus        29 ~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~--~~~~----------------------------------~   72 (432)
T 3n9x_A           29 IIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI--DCKR----------------------------------I   72 (432)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHH--HHHH----------------------------------H
T ss_pred             EEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChH--HHHH----------------------------------H
Confidence            3456899999999999996 5789999999875433211  1111                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccC-------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLS-------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                      .+|...+.+    +.+.   .+.+++..+.       ...++||||++| +|.+++.....++        +.       
T Consensus        73 ~~E~~~l~~----l~h~---nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~--------~~-------  129 (432)
T 3n9x_A           73 LREITILNR----LKSD---YIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLT--------EE-------  129 (432)
T ss_dssp             HHHHHHHHH----CCCT---TBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHHSSCCCC--------HH-------
T ss_pred             HHHHHHHHH----cCCC---CcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHhccCCCC--------HH-------
Confidence            123322222    2222   2233332221       456999999985 8888876433222        11       


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHH----------------HH
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLAS----------------IV  375 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~----------------~~  375 (433)
                       ....+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||+++.+...........                ..
T Consensus       130 -~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (432)
T 3n9x_A          130 -HIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQL  208 (432)
T ss_dssp             -HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-----------------------------
T ss_pred             -HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccc
Confidence             1234667788999999999999999999999999999999999999998765432211100                00


Q ss_pred             HHHhcCHHHHHHH-HHhcCCCCCCCChHHHHHHHHHHh
Q 013944          376 HIVNGDWQSLVHS-LTEMDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       376 ~~~~~d~~~~~~~-l~~~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      ....+..+.++.. +..-+.....+|+|+++-.+.+++
T Consensus       209 ~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          209 TSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             --CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             cCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence            1111222233333 334455677889999999888888

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.77  E-value=2.3e-18  Score=166.78  Aligned_cols=139  Identities=21%  Similarity=0.217  Sum_probs=96.2

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCch---hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR---HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~---~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+....   ..+.+                                      
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~--------------------------------------   59 (316)
T 2ac3_A           18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR--------------------------------------   59 (316)
T ss_dssp             CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHH--------------------------------------
T ss_pred             CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHH--------------------------------------
Confidence            46799999999999995 5899999999764321   11111                                      


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                         |...+.+    +.++++  +++++..  .....++||||++|++|.+++......+        +..        ..
T Consensus        60 ---E~~~l~~----~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~  114 (316)
T 2ac3_A           60 ---EVEMLYQ----CQGHRN--VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN--------ELE--------AS  114 (316)
T ss_dssp             ---HHHHHHH----TCCCTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCC--------HHH--------HH
T ss_pred             ---HHHHHHH----hcCCCC--eeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCC--------HHH--------HH
Confidence               2222211    112222  3333332  2356799999999999999987543322        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc---EEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ---IGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~---l~l~DFGl~~~l~  363 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.++.   ++|+|||++..+.
T Consensus       115 ~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A          115 VVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             HHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            35667889999999999999999999999988776   9999999987664

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.77  E-value=1.1e-19  Score=179.63  Aligned_cols=182  Identities=22%  Similarity=0.198  Sum_probs=107.4

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+.. +|+.||||+.+.....      ..+                                  .
T Consensus        57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~----------------------------------~   96 (349)
T 2w4o_A           57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK------KIV----------------------------------R   96 (349)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------------------------------------------
T ss_pred             EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhH------HHH----------------------------------H
Confidence            3568999999999999974 7899999998753211      011                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +. +++  +++++..  .....++||||++|++|.+++......+        +..        ...+
T Consensus        97 ~E~~~l~~----l~-h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~i  153 (349)
T 2w4o_A           97 TEIGVLLR----LS-HPN--IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS--------ERD--------AADA  153 (349)
T ss_dssp             --CHHHHH----CC-CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCC--------HHH--------HHHH
T ss_pred             HHHHHHHh----CC-CCC--CcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCC--------HHH--------HHHH
Confidence            12222222    22 222  3333332  3456799999999999999886443222        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEcc---CCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTS---SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~---~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      ..++..+|.+||+.|++|+|+||+||+++.   ++.++|+|||++.........   .    ...+....++..+..-+.
T Consensus       154 ~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~---~----~~~gt~~y~aPE~~~~~~  226 (349)
T 2w4o_A          154 VKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM---K----TVCGTPGYCAPEILRGCA  226 (349)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------------------CGGGSCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc---c----cccCCCCccCHHHhcCCC
Confidence            567888999999999999999999999975   899999999999876543211   1    111222223333333333


Q ss_pred             CCCCCChHHHHHHHHHHh
Q 013944          395 VRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l  412 (433)
                      ..+..|+++++..+.+++
T Consensus       227 ~~~~~DiwslG~il~ell  244 (349)
T 2w4o_A          227 YGPEVDMWSVGIITYILL  244 (349)
T ss_dssp             CCTHHHHHHHHHHHHHHH
T ss_pred             CCcccchHHHHHHHHHHH
Confidence            455666776666665555

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.76  E-value=1.4e-18  Score=171.30  Aligned_cols=169  Identities=21%  Similarity=0.175  Sum_probs=112.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+..... ...++.                                     
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~E~~-------------------------------------   67 (342)
T 2qr7_A           26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-PTEEIE-------------------------------------   67 (342)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-CHHHHH-------------------------------------
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-hHHHHH-------------------------------------
Confidence            356899999999999996 47999999998654321 111221                                     


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                          .+.++    .++++  +++++..  .....++||||++|++|.+.+......+        +..        ...+
T Consensus        68 ----~l~~~----~~hp~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~--------~~~--------~~~~  121 (342)
T 2qr7_A           68 ----ILLRY----GQHPN--IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFS--------ERE--------ASAV  121 (342)
T ss_dssp             ----HHHHH----TTSTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCC--------HHH--------HHHH
T ss_pred             ----HHHHh----cCCCC--cCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCC--------HHH--------HHHH
Confidence                11111    11222  2333332  2356699999999999999886543222        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccC----CcEEEEecccccccCHHH-------------HHHHHHHHHHHHhc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSS----GQIGFLDFGLLCRMERKH-------------QFAMLASIVHIVNG  380 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~----g~l~l~DFGl~~~l~~~~-------------~~~~~~~~~~~~~~  380 (433)
                      ..++..++.+||+.|++|+|+||+||++..+    +.++|+|||++..+....             .+.....-......
T Consensus       122 ~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  201 (342)
T 2qr7_A          122 LFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAAC  201 (342)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCcc
Confidence            6678889999999999999999999998543    359999999987543211             11222222234567


Q ss_pred             CHHHHHHHHHhcC
Q 013944          381 DWQSLVHSLTEMD  393 (433)
Q Consensus       381 d~~~~~~~l~~~g  393 (433)
                      |+|+++..+++|-
T Consensus       202 DiwslG~il~ell  214 (342)
T 2qr7_A          202 DIWSLGVLLYTML  214 (342)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             CeeeHhHHHHHHh
Confidence            9999999998874

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.76  E-value=7.9e-20  Score=186.49  Aligned_cols=145  Identities=19%  Similarity=0.209  Sum_probs=98.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||+|+........  .+...+                                  .
T Consensus        15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~--~~~~~~----------------------------------~   58 (444)
T 3soa_A           15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA--RDHQKL----------------------------------E   58 (444)
T ss_dssp             EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH--HHHHHH----------------------------------H
T ss_pred             EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH--HHHHHH----------------------------------H
Confidence            456899999999999985 589999999876543211  111111                                  2


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +. +++  +++++..  ..+..++||||++|++|.+.+......+        +..        ...+
T Consensus        59 ~E~~il~~----l~-hpn--Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~--------e~~--------~~~i  115 (444)
T 3soa_A           59 REARICRL----LK-HPN--IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS--------EAD--------ASHC  115 (444)
T ss_dssp             HHHHHHHH----CC-BTT--BCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCC--------HHH--------HHHH
T ss_pred             HHHHHHHh----CC-CcC--CCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCC--------HHH--------HHHH
Confidence            23332222    22 222  3333332  3456799999999999999887543322        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEc---cCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYT---SSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~---~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|+||+||+++   .++.++|+|||++..+..
T Consensus       116 ~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A          116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            56788899999999999999999999998   457899999999977654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.76  E-value=3.1e-19  Score=177.75  Aligned_cols=158  Identities=16%  Similarity=0.158  Sum_probs=101.1

Q ss_pred             cCCccccccccceeEEEEe--------cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          160 ISEEPVAAASFGQVYRGST--------LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l--------~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      ...+.||+|+||+||+|+.        .++..||||+.+......   +...+                           
T Consensus        84 ~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~---------------------------  133 (370)
T 2psq_A           84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDL---------------------------  133 (370)
T ss_dssp             EEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHH---HHHHH---------------------------
T ss_pred             EeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHH---HHHHH---------------------------
Confidence            3457899999999999985        245689999998654321   11111                           


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCC---Cchhhhhh
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGS---STHLDRQK  306 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~---~~~~~~~~  306 (433)
                             ..|...+.+    +..+++  +++++..  .....++||||++|++|.+++...........   ...+ ...
T Consensus       134 -------~~E~~~l~~----l~~hpn--Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~-~~~  199 (370)
T 2psq_A          134 -------VSEMEMMKM----IGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP-EEQ  199 (370)
T ss_dssp             -------HHHHHHHHH----SCCCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------C-CCC
T ss_pred             -------HHHHHHHHH----hcCCCC--EeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccc-ccc
Confidence                   223322222    212232  3444433  23567999999999999999876432110000   0000 000


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          307 LDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       307 ~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +.... + ..+..+++.+|.+||+.|++|+|+||+||+++.+|.++|+|||+++.+.
T Consensus       200 ~~~~~-~-~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  254 (370)
T 2psq_A          200 MTFKD-L-VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN  254 (370)
T ss_dssp             CCHHH-H-HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             CCHHH-H-HHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccC
Confidence            11111 1 2355678899999999999999999999999999999999999987553

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.76  E-value=2.8e-20  Score=175.95  Aligned_cols=141  Identities=17%  Similarity=0.129  Sum_probs=99.8

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|++|.||+|+.+++..||||+.+......-                                       ++.
T Consensus        11 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~---------------------------------------~~~   51 (268)
T 3sxs_A           11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED---------------------------------------EFF   51 (268)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHH---------------------------------------HHH
T ss_pred             eeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHH---------------------------------------HHH
Confidence            34568999999999999988888999999875432110                                       012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccC-CCCCCCCchhhhhhhHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTG-SSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .|...+.++    . ++  .+++++..  .....++||||++|++|.+++..... .+        +..        ...
T Consensus        52 ~E~~~l~~l----~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~--------~~~--------~~~  108 (268)
T 3sxs_A           52 QEAQTMMKL----S-HP--KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLE--------PSQ--------LLE  108 (268)
T ss_dssp             HHHHHHHHC----C-CT--TBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCC--------HHH--------HHH
T ss_pred             HHHHHHHhC----C-CC--CEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCC--------HHH--------HHH
Confidence            233333222    2 22  23344433  23556999999999999998865321 11        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++..++.+||+.|++|+|+||+||+++.++.++|+|||++...
T Consensus       109 i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  154 (268)
T 3sxs_A          109 MCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV  154 (268)
T ss_dssp             HHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEEC
T ss_pred             HHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceec
Confidence            5667888999999999999999999999999999999999998754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.76  E-value=8.5e-19  Score=183.57  Aligned_cols=147  Identities=18%  Similarity=0.152  Sum_probs=99.8

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+.....   ..                                ..+-.+..
T Consensus       189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~---~~--------------------------------~~~~~~~~  233 (576)
T 2acx_A          189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK---KR--------------------------------KGEAMALN  233 (576)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH---HT--------------------------------TCHHHHHH
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh---hh--------------------------------HHHHHHHH
Confidence            46899999999999996 48999999998531100   00                                00001122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +. +++  +++++..  .....+|||||++|++|.+++.......      +++..        ...+.
T Consensus       234 E~~iL~~----l~-hp~--Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~------l~e~~--------~~~i~  292 (576)
T 2acx_A          234 EKQILEK----VN-SRF--VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG------FPEAR--------AVFYA  292 (576)
T ss_dssp             HHHHHHH----CC-CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCC------CCHHH--------HHHHH
T ss_pred             HHHHHHH----cC-CCC--EeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCC------CCHHH--------HHHHH
Confidence            3333322    22 222  3333332  3356799999999999999886432211      11111        12356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       293 ~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          293 AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             HHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            6788899999999999999999999999999999999999987654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.76  E-value=5.6e-19  Score=189.23  Aligned_cols=145  Identities=19%  Similarity=0.187  Sum_probs=98.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+++...... ..+...                                  +.
T Consensus       345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~----------------------------------~~  389 (674)
T 3pfq_A          345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVEC----------------------------------TM  389 (674)
T ss_dssp             EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH-TTTTHH----------------------------------HH
T ss_pred             EEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc-HHHHHH----------------------------------HH
Confidence            356899999999999996 478999999986321100 000000                                  01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+    ....+++.  ++.++..  .....+|||||++|++|.+++.....++        +.        ....+
T Consensus       390 ~E~~~l----~~~~~~~~--i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~--------~~--------~~~~~  447 (674)
T 3pfq_A          390 VEKRVL----ALPGKPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK--------EP--------HAVFY  447 (674)
T ss_dssp             HHHHHH----TCTTCCTT--BCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCC--------HH--------HHHHH
T ss_pred             HHHHHH----HhccCCCe--EEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCC--------HH--------HHHHH
Confidence            121111    11222333  3333333  3356799999999999999987644332        11        11245


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++..+|.|||+.||+||||||+|||++.+|.++|+|||+++..
T Consensus       448 ~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~  492 (674)
T 3pfq_A          448 AAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  492 (674)
T ss_dssp             HHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence            667888999999999999999999999999999999999998753

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=3.7e-20  Score=180.80  Aligned_cols=143  Identities=18%  Similarity=0.172  Sum_probs=99.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||+|+.+......     ..+                                  .
T Consensus         9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----~~~----------------------------------~   49 (321)
T 1tki_A            9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ-----VLV----------------------------------K   49 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH-----HHH----------------------------------H
T ss_pred             eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccH-----HHH----------------------------------H
Confidence            456899999999999996 478999999886442211     111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+..    +. +++  +++++..  .....++||||++|++|.+++.....       .+++..        ...+
T Consensus        50 ~E~~~l~~----l~-hpn--Iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~-------~~~~~~--------~~~i  107 (321)
T 1tki_A           50 KEISILNI----AR-HRN--ILHLHESFESMEELVMIFEFISGLDIFERINTSAF-------ELNERE--------IVSY  107 (321)
T ss_dssp             HHHHHHHH----SC-CTT--BCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSC-------CCCHHH--------HHHH
T ss_pred             HHHHHHHh----CC-CCC--CCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCC-------CCCHHH--------HHHH
Confidence            22222222    22 222  3333332  34667999999999999998864321       111211        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEcc--CCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTS--SGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~--~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|+||+||+++.  ++.++|+|||++..+.+
T Consensus       108 ~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~  156 (321)
T 1tki_A          108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence            667888999999999999999999999987  78999999999987643

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.76  E-value=7.8e-19  Score=169.90  Aligned_cols=171  Identities=23%  Similarity=0.325  Sum_probs=95.1

Q ss_pred             HHHHhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCch-hhHHHHHHH
Q 013944          126 LSELHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-HVVVRDIYI  203 (433)
Q Consensus       126 L~~lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-~~~~~Dl~~  203 (433)
                      |+.+|++.||.  ..+.+.-+..++....+.|.  ..+.||+|++|.||+|+. .+|+.||||+.+.... +.+..    
T Consensus         2 l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~----   73 (314)
T 3com_A            2 LETVQLRNPPR--RQLKKLDEDSLTKQPEEVFD--VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK----   73 (314)
T ss_dssp             ------------------------------CEE--EEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHH----
T ss_pred             ccccccCCCCc--cchhhcCchhhhhcchhhhh--hheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHH----
Confidence            56678877774  44455566666666555544  356899999999999996 4799999998764321 11111    


Q ss_pred             HHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCC
Q 013944          204 LRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGE  281 (433)
Q Consensus       204 l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~  281 (433)
                                                           |...+.    .+. ++  .+++++..  .....++||||++|+
T Consensus        74 -------------------------------------e~~~l~----~l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~  109 (314)
T 3com_A           74 -------------------------------------EISIMQ----QCD-SP--HVVKYYGSYFKNTDLWIVMEYCGAG  109 (314)
T ss_dssp             -------------------------------------HHHHHH----TCC-CT--TBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             -------------------------------------HHHHHH----hCC-CC--CCccEEEEEEeCCEEEEEeecCCCC
Confidence                                                 222221    122 22  23344432  235679999999999


Q ss_pred             CcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          282 SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       282 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      +|.+++......       +++..        ...+..++..++.+||..|++|+|+||.||+++.+|.++|+|||++..
T Consensus       110 ~L~~~~~~~~~~-------~~~~~--------~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~  174 (314)
T 3com_A          110 SVSDIIRLRNKT-------LTEDE--------IATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQ  174 (314)
T ss_dssp             EHHHHHHHHTCC-------CCHHH--------HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CHHHHHHhcCCC-------CCHHH--------HHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence            999988643211       11111        123556788899999999999999999999999999999999999876


Q ss_pred             cC
Q 013944          362 ME  363 (433)
Q Consensus       362 l~  363 (433)
                      +.
T Consensus       175 ~~  176 (314)
T 3com_A          175 LT  176 (314)
T ss_dssp             CB
T ss_pred             hh
Confidence            53

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.76  E-value=5.5e-19  Score=172.61  Aligned_cols=173  Identities=21%  Similarity=0.186  Sum_probs=111.5

Q ss_pred             CCccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+.||+|+||.||+|+..    .+..||||+.+.........+                                    
T Consensus        53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~------------------------------------   96 (325)
T 3kul_A           53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD------------------------------------   96 (325)
T ss_dssp             EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHH------------------------------------
T ss_pred             EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHH------------------------------------
Confidence            4578999999999999963    345699999886543321100                                    


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                       +..|...+.+    +.   +-.+++++..+  ....++||||++|++|.+++....+.       +++..       + 
T Consensus        97 -~~~E~~~l~~----l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~-------~-  153 (325)
T 3kul_A           97 -FLSEASIMGQ----FD---HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-------FTIMQ-------L-  153 (325)
T ss_dssp             -HHHHHHHHTT----CC---CTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTC-------SCHHH-------H-
T ss_pred             -HHHHHHHHHh----CC---CCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccC-------CCHHH-------H-
Confidence             1223322222    21   22334444433  35569999999999999998643211       11111       1 


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH----------------HHHHHHHHHHH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ----------------FAMLASIVHIV  378 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~----------------~~~~~~~~~~~  378 (433)
                      ..+..+++.+|.+||+.|++|+|+||+||+++.++.++|+|||++..+.....                ......-....
T Consensus       154 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  233 (325)
T 3kul_A          154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSS  233 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECH
T ss_pred             HHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCc
Confidence            23556788899999999999999999999999999999999999987644321                11111001123


Q ss_pred             hcCHHHHHHHHHhc
Q 013944          379 NGDWQSLVHSLTEM  392 (433)
Q Consensus       379 ~~d~~~~~~~l~~~  392 (433)
                      ..|.|+++..+++|
T Consensus       234 ~~Di~slG~il~el  247 (325)
T 3kul_A          234 ASDVWSFGVVMWEV  247 (325)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            45888888888775

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.76  E-value=2.9e-20  Score=191.20  Aligned_cols=177  Identities=18%  Similarity=0.180  Sum_probs=114.2

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.++...... ....                                  .
T Consensus        18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~-~~~~----------------------------------~   62 (476)
T 2y94_A           18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSL-DVVG----------------------------------K   62 (476)
T ss_dssp             EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHT-TTHH----------------------------------H
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH-HHHH----------------------------------H
Confidence            45567899999999999996 4899999999863211000 0000                                  0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+.   +-++++++..  ..+..++||||++|++|.+++.....++        +..        ..
T Consensus        63 ~~~Ei~~l~----~l~---HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~--------~~~--------~~  119 (476)
T 2y94_A           63 IRREIQNLK----LFR---HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLD--------EKE--------SR  119 (476)
T ss_dssp             HHHHHHHHT----TCC---CTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCC--------HHH--------HH
T ss_pred             HHHHHHHHH----hCC---CCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCC--------HHH--------HH
Confidence            122332221    122   2233444433  2456799999999999999986433222        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH------------HHHHHHH-HHHHhcCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ------------FAMLASI-VHIVNGDW  382 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~------------~~~~~~~-~~~~~~d~  382 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.....            +.+...- ......|.
T Consensus       120 ~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di  199 (476)
T 2y94_A          120 RLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDI  199 (476)
T ss_dssp             HHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCccee
Confidence            3566788999999999999999999999999999999999999887643210            1111000 00234577


Q ss_pred             HHHHHHHHhcC
Q 013944          383 QSLVHSLTEMD  393 (433)
Q Consensus       383 ~~~~~~l~~~g  393 (433)
                      |+++..+++|-
T Consensus       200 wSlGvil~ell  210 (476)
T 2y94_A          200 WSSGVILYALL  210 (476)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhhHHHHHHHh
Confidence            88888777763

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.76  E-value=1.2e-18  Score=169.69  Aligned_cols=142  Identities=19%  Similarity=0.293  Sum_probs=100.8

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+.++.....+..++.+++                                
T Consensus        38 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~--------------------------------   85 (330)
T 3nsz_A           38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE--------------------------------   85 (330)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHH--------------------------------
T ss_pred             eEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHH--------------------------------
Confidence            33457899999999999985 689999999998766555444444433                                


Q ss_pred             hHHHHHHHHHHHHhcCCCCC-eEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPF-IHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~-v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                               ++    .++++ +.+-.++.. .....++||||++|++|.+++..   .        ++..        ..
T Consensus        86 ---------~l----~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~--------~~~~--------~~  133 (330)
T 3nsz_A           86 ---------NL----RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---L--------TDYD--------IR  133 (330)
T ss_dssp             ---------HH----TTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG---C--------CHHH--------HH
T ss_pred             ---------Hc----CCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh---C--------CHHH--------HH
Confidence                     11    11222 112222221 13456999999999999888742   1        1111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCC-cEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g-~l~l~DFGl~~~l~~  364 (433)
                      .+..+++.++.+||+.|++|+|+||+||+++.++ .++|+|||++..+..
T Consensus       134 ~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          134 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            3566788899999999999999999999999777 899999999976543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.76  E-value=4.6e-18  Score=170.67  Aligned_cols=178  Identities=19%  Similarity=0.233  Sum_probs=114.1

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+......   ....                                  
T Consensus        11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~~----------------------------------   53 (396)
T 4eut_A           11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVDV----------------------------------   53 (396)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---CHHH----------------------------------
T ss_pred             eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc---hHHH----------------------------------
Confidence            44467899999999999996 469999999986422110   0000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc---c-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY---L-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~---~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      +..|...+.++    .+ +  .+++++..   . ....++||||++|++|.+++.......     .+++..        
T Consensus        54 ~~~E~~~l~~l----~h-p--nIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-----~l~~~~--------  113 (396)
T 4eut_A           54 QMREFEVLKKL----NH-K--NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY-----GLPESE--------  113 (396)
T ss_dssp             HHHHHHHHHHC----CC-T--TBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTT-----CCCHHH--------
T ss_pred             HHHHHHHHHhc----CC-C--CCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhccc-----CCCHHH--------
Confidence            01222222222    22 2  23333322   1 235699999999999999986532100     011111        


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEE----ccCCcEEEEecccccccCHHHH------------HHHHHH----
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRY----TSSGQIGFLDFGLLCRMERKHQ------------FAMLAS----  373 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv----~~~g~l~l~DFGl~~~l~~~~~------------~~~~~~----  373 (433)
                      ...+..++..+|.+||+.|++|+|+||+||++    +.++.++|+|||++..+.....            ..+...    
T Consensus       114 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  193 (396)
T 4eut_A          114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLR  193 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC-
T ss_pred             HHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccc
Confidence            12356678889999999999999999999999    6677899999999976543221            112111    


Q ss_pred             ----HHHHHhcCHHHHHHHHHhcC
Q 013944          374 ----IVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       374 ----~~~~~~~d~~~~~~~l~~~g  393 (433)
                          -......|.|+++..+++|-
T Consensus       194 ~~~~~~~~~~~DiwSlG~il~el~  217 (396)
T 4eut_A          194 KDHQKKYGATVDLWSIGVTFYHAA  217 (396)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCcHHHHHHHHHHHHHHH
Confidence                12345679999999988874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.76  E-value=1.7e-18  Score=177.04  Aligned_cols=144  Identities=19%  Similarity=0.218  Sum_probs=98.7

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|+||.||+|+..++..||||+.+++....     .                                  +|..
T Consensus       188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-----~----------------------------------~~~~  228 (452)
T 1fmk_A          188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-----E----------------------------------AFLQ  228 (452)
T ss_dssp             EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCH-----H----------------------------------HHHH
T ss_pred             eeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCH-----H----------------------------------HHHH
Confidence            356899999999999998878889999998653210     0                                  0122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |+..+.++    .+ ++  +++++... ....++||||++|++|.+++....+..            +.... + ..+..
T Consensus       229 E~~~l~~l----~h-p~--iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~------------~~~~~-~-~~i~~  287 (452)
T 1fmk_A          229 EAQVMKKL----RH-EK--LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY------------LRLPQ-L-VDMAA  287 (452)
T ss_dssp             HHHHHHHC----CC-TT--BCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTT------------CCHHH-H-HHHHH
T ss_pred             HHHHHHhC----CC-CC--EeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCC------------CCHHH-H-HHHHH
Confidence            43333332    22 22  23333222 256799999999999999986432110            11111 1 23566


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +++.+|.+||+.|++|+|+||.||+++.++.++|+|||+++.+..
T Consensus       288 qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  332 (452)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             HHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence            788999999999999999999999999999999999999987654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.75  E-value=1.5e-18  Score=177.54  Aligned_cols=144  Identities=22%  Similarity=0.249  Sum_probs=101.0

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|+||.||+|+.+++..||||+.+++....     .                                  +|..|
T Consensus       193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~-----~----------------------------------~~~~E  233 (454)
T 1qcf_A          193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-----E----------------------------------AFLAE  233 (454)
T ss_dssp             EEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCH-----H----------------------------------HHHHH
T ss_pred             EEEcccCCceEEEEEEECCccEEEEEEecCCCccH-----H----------------------------------HHHHH
Confidence            46899999999999998888999999988653210     0                                  01223


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      +..+.+    +.+.+   +.+++..+ ....++||||++|++|.+++....+.            ..... .+ ..+..+
T Consensus       234 ~~~l~~----l~h~~---iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~------------~~~~~-~~-~~~~~q  292 (454)
T 1qcf_A          234 ANVMKT----LQHDK---LVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS------------KQPLP-KL-IDFSAQ  292 (454)
T ss_dssp             HHHHTT----CCCTT---BCCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHH------------TCCHH-HH-HHHHHH
T ss_pred             HHHHhh----CCCCC---EeeEEEEEeCCccEEEEeecCCCcHHHHHHhccCC------------CCCHH-HH-HHHHHH
Confidence            333222    22222   22233222 35679999999999999998643210            01111 11 125567


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ++.+|.+||+.|++|+|+||.||+++.++.++|+|||+++.+...
T Consensus       293 i~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~  337 (454)
T 1qcf_A          293 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN  337 (454)
T ss_dssp             HHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred             HHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence            889999999999999999999999999999999999999877543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.75  E-value=1e-18  Score=167.68  Aligned_cols=145  Identities=17%  Similarity=0.122  Sum_probs=97.0

Q ss_pred             CCccccccccceeEEEEe-----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGST-----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|+||.||+|++     .+|+.||||+.+.......    ..                                
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~----~~--------------------------------   57 (295)
T 3ugc_A           14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RD--------------------------------   57 (295)
T ss_dssp             EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHH----HH--------------------------------
T ss_pred             hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHH----HH--------------------------------
Confidence            456899999999999984     3789999999876533211    01                                


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeeccc----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYL----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                        +..|...+.+    +.+ +  ++++++..+    ....++||||++|++|.+++......       .++..      
T Consensus        58 --~~~E~~~l~~----l~h-~--~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~------  115 (295)
T 3ugc_A           58 --FEREIEILKS----LQH-D--NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------IDHIK------  115 (295)
T ss_dssp             --HHHHHHHHHT----CCC-T--TBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGG-------CCHHH------
T ss_pred             --HHHHHHHHHh----CCC-C--CEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccc-------cCHHH------
Confidence              1223322222    222 2  233333322    13468999999999999998653210       11111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                        ...+..++..++.+||+.|++|+|+||+||+++.+++++|+|||++..+...
T Consensus       116 --~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (295)
T 3ugc_A          116 --LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  167 (295)
T ss_dssp             --HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred             --HHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence              1235667888999999999999999999999999999999999999876543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.75  E-value=1.9e-19  Score=180.24  Aligned_cols=147  Identities=16%  Similarity=0.214  Sum_probs=100.4

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.+.....  ..                   ....              .+
T Consensus        18 ~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~--~~-------------------~~~~--------------~~   62 (384)
T 4fr4_A           18 EILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV--ER-------------------NEVR--------------NV   62 (384)
T ss_dssp             EEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH--HT-------------------TCHH--------------HH
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc--cH-------------------HHHH--------------HH
Confidence            3457899999999999996 57899999987532100  00                   0000              01


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.    .+. ++  .+++++..+  ....++||||++|++|.+++......+        +.        ....
T Consensus        63 ~~E~~il~----~l~-hp--~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~--------~~--------~~~~  119 (384)
T 4fr4_A           63 FKELQIMQ----GLE-HP--FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK--------EE--------TVKL  119 (384)
T ss_dssp             HHHHHHHH----TCC-CT--TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCC--------HH--------HHHH
T ss_pred             HHHHHHHH----hCC-CC--CCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCC--------HH--------HHHH
Confidence            12322222    222 22  233444332  356799999999999999887543322        11        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..+++.+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       120 ~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A          120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence            566788999999999999999999999999999999999999987643

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.75  E-value=5.3e-19  Score=168.35  Aligned_cols=190  Identities=16%  Similarity=0.174  Sum_probs=115.0

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+.. +|+.||||+.+.........+                  ...              -.+.
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~------------------~~~--------------~~~~   56 (283)
T 3bhy_A            9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRG------------------VSR--------------EEIE   56 (283)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSS------------------BCH--------------HHHH
T ss_pred             hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccc------------------hHH--------------HHHH
Confidence            4568999999999999964 799999998764321100000                  000              0012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    . +++  +++++..  .....++||||++|++|.+++......+        +..        ...+
T Consensus        57 ~E~~~l~~l----~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~~  113 (283)
T 3bhy_A           57 REVNILREI----R-HPN--IITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT--------EDE--------ATQF  113 (283)
T ss_dssp             HHHHHHHHC----C-CTT--BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCC--------HHH--------HHHH
T ss_pred             HHHHHHHhC----C-CCC--eeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCC--------HHH--------HHHH
Confidence            233332222    2 222  3333332  3456799999999999999986543322        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCC----cEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSG----QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g----~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g  393 (433)
                      ..++..++.+||+.|++|+|+||+||+++.++    +++|+|||++..+.......       ...+....++..+..-+
T Consensus       114 ~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~  186 (283)
T 3bhy_A          114 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK-------NIFGTPEFVAPEIVNYE  186 (283)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC---------------CCCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCccc-------ccCCCcCccCcceecCC
Confidence            66788899999999999999999999998877    89999999998876543211       01122222333333334


Q ss_pred             CCCCCCChHHHHHHHHHHh
Q 013944          394 VVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       394 ~~~~~~d~~~~~~~l~~~l  412 (433)
                      ...+..|++.++..+.+++
T Consensus       187 ~~~~~~Di~slG~il~~l~  205 (283)
T 3bhy_A          187 PLGLEADMWSIGVITYILL  205 (283)
T ss_dssp             CCCTHHHHHHHHHHHHHHH
T ss_pred             CCCcchhhhhHHHHHHHHH
Confidence            4445566666665555554

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.75  E-value=1.7e-17  Score=157.60  Aligned_cols=158  Identities=20%  Similarity=0.255  Sum_probs=104.5

Q ss_pred             HHhCCChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHH
Q 013944          147 EELGSPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYA  225 (433)
Q Consensus       147 ~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~  225 (433)
                      ...|..+++   |...+.||+|++|.||+|+. .+|+.||||+.++.....  .+  ..                     
T Consensus         4 ~~~g~~~~~---y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~--~~---------------------   55 (278)
T 3cok_A            4 TCIGEKIED---FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK--AG--MV---------------------   55 (278)
T ss_dssp             HHHCSSGGG---EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT--CH---------------------
T ss_pred             ccccccccc---ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh--hh--HH---------------------
Confidence            345555544   34467899999999999996 589999999975321100  00  00                     


Q ss_pred             HHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhh
Q 013944          226 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLD  303 (433)
Q Consensus       226 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~  303 (433)
                          .      .+..|...+    ..+. ++  .+++++..  .....++||||++|++|.+++.....       .+++
T Consensus        56 ----~------~~~~e~~~l----~~l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------~~~~  111 (278)
T 3cok_A           56 ----Q------RVQNEVKIH----CQLK-HP--SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-------PFSE  111 (278)
T ss_dssp             ----H------HHHHHHHHH----TTBC-CT--TBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSS-------CCCH
T ss_pred             ----H------HHHHHHHHH----HhCC-CC--CeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccC-------CCCH
Confidence                0      012222222    1222 22  23333332  34567999999999999998864321       0111


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          304 RQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       304 ~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..        ...+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++.....
T Consensus       112 ~~--------~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A          112 NE--------ARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             HH--------HHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             HH--------HHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            11        123556788899999999999999999999999999999999999987764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.75  E-value=4.2e-18  Score=164.47  Aligned_cols=146  Identities=18%  Similarity=0.243  Sum_probs=100.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+...........  ..                                  +.
T Consensus         7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~--~~----------------------------------~~   50 (311)
T 4agu_A            7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIK--KI----------------------------------AL   50 (311)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHH--HH----------------------------------HH
T ss_pred             EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHH--HH----------------------------------HH
Confidence            456899999999999996 479999999876543221100  00                                  11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|.+.+.++    . ++  .+++++..  .....++||||++|++|.+++....+.+        +.        ....+
T Consensus        51 ~E~~~l~~l----~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~--------~~--------~~~~i  107 (311)
T 4agu_A           51 REIRMLKQL----K-HP--NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVP--------EH--------LVKSI  107 (311)
T ss_dssp             HHHHHHHHC----C-CT--TBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCC--------HH--------HHHHH
T ss_pred             HHHHHHHhC----C-CC--CccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCC--------HH--------HHHHH
Confidence            233322222    2 22  23333332  2456799999999999988876543322        11        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+...
T Consensus       108 ~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  155 (311)
T 4agu_A          108 TWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP  155 (311)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             HHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence            567888999999999999999999999999999999999999887643

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.75  E-value=4.7e-18  Score=161.66  Aligned_cols=149  Identities=17%  Similarity=0.202  Sum_probs=99.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+..+.......                                   .+-.
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~   55 (279)
T 3fdn_A           11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-----------------------------------VEHQ   55 (279)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHT-----------------------------------CHHH
T ss_pred             EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhh-----------------------------------HHHH
Confidence            34467899999999999986 57889999997532111000                                   0000


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+    ..+.   +-.+++++..  ..+..++||||++|++|.+++......+        +..        ..
T Consensus        56 ~~~e~~~l----~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~--------~~~--------~~  112 (279)
T 3fdn_A           56 LRREVEIQ----SHLR---HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--------EQR--------TA  112 (279)
T ss_dssp             HHHHHHHH----TTCC---CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCC--------HHH--------HH
T ss_pred             HHHHHHHH----HcCC---CCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCC--------HHH--------HH
Confidence            11222222    1222   2234444443  3356799999999999999886543322        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++......
T Consensus       113 ~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~  162 (279)
T 3fdn_A          113 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  162 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred             HHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence            35567888999999999999999999999999999999999998766543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.75  E-value=2.8e-18  Score=169.60  Aligned_cols=145  Identities=21%  Similarity=0.244  Sum_probs=100.8

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|.||+|+. .+|+.||+|+.+..........                                     +
T Consensus        36 ~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~-------------------------------------~   78 (360)
T 3eqc_A           36 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ-------------------------------------I   78 (360)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHH-------------------------------------H
T ss_pred             eeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHH-------------------------------------H
Confidence            3456899999999999996 4899999999876543221100                                     0


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.    .+.   +-++++++..  ..+..++||||++|++|.+++......+        +.        ....
T Consensus        79 ~~E~~~l~----~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------~~~~  135 (360)
T 3eqc_A           79 IRELQVLH----ECN---SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--------EQ--------ILGK  135 (360)
T ss_dssp             HHHHGGGG----GCC---CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCC--------HH--------HHHH
T ss_pred             HHHHHHHH----HCC---CCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCC--------HH--------HHHH
Confidence            11222111    121   2223444432  2456799999999999999987543322        11        1123


Q ss_pred             HHHHHHHHHHHHHHC-CccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~-givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..++.+||.. |++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       136 i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  184 (360)
T 3eqc_A          136 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  184 (360)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence            556688899999985 999999999999999999999999999876543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.75  E-value=2.9e-20  Score=183.70  Aligned_cols=152  Identities=16%  Similarity=0.147  Sum_probs=97.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+......  .                 .....              -++.
T Consensus        28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~-----------------~~~~~--------------~~~~   74 (351)
T 3c0i_A           28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTS--S-----------------PGLST--------------EDLK   74 (351)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHT--S-----------------SSCCH--------------HHHH
T ss_pred             EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccc--c-----------------ccchH--------------HHHH
Confidence            456899999999999996 589999999875311000  0                 00000              0112


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|...+..    +. ++  ++++++..  .....++||||++|++|.+.+.......    ..+++.        ....+
T Consensus        75 ~E~~~l~~----l~-hp--nIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~----~~~~~~--------~~~~i  135 (351)
T 3c0i_A           75 REASICHM----LK-HP--HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG----FVYSEA--------VASHY  135 (351)
T ss_dssp             HHHHHHHH----CC-CT--TBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTT----CCCCHH--------HHHHH
T ss_pred             HHHHHHHh----CC-CC--CCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccC----CCCCHH--------HHHHH
Confidence            23332222    22 22  23344432  2356799999999999988775431100    001111        12235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCc---EEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQ---IGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~---l~l~DFGl~~~l~~  364 (433)
                      ..++..+|.+||+.|++|+|+||+||+++.++.   ++|+|||++..+..
T Consensus       136 ~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~  185 (351)
T 3c0i_A          136 MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE  185 (351)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence            667889999999999999999999999987654   99999999977643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.75  E-value=1.7e-18  Score=171.83  Aligned_cols=146  Identities=19%  Similarity=0.212  Sum_probs=99.0

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.+.....  ..+...+                                  
T Consensus        32 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~----------------------------------   75 (362)
T 2bdw_A           32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKL----------------------------------   75 (362)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--HHHHHHH----------------------------------
T ss_pred             EEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC--HHHHHHH----------------------------------
Confidence            3456899999999999996 47999999998653221  1111111                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .+|...+.+    +. +++  +++++..  .....++||||++|++|.+.+......+        +..        ...
T Consensus        76 ~~E~~il~~----l~-hpn--Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~--------~~~--------~~~  132 (362)
T 2bdw_A           76 EREARICRK----LQ-HPN--IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS--------EAD--------ASH  132 (362)
T ss_dssp             HHHHHHHHH----CC-CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCC--------HHH--------HHH
T ss_pred             HHHHHHHHh----CC-CCC--CCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCC--------HHH--------HHH
Confidence            223332222    22 222  3334332  3356799999999999998876433222        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccC---CcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~---g~l~l~DFGl~~~l~~  364 (433)
                      +..++..++.+||+.|++|+|+||+||+++.+   +.++|+|||++..+..
T Consensus       133 ~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~  183 (362)
T 2bdw_A          133 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  183 (362)
T ss_dssp             HHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred             HHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence            55678889999999999999999999999865   4599999999987653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.75  E-value=2.1e-18  Score=167.53  Aligned_cols=149  Identities=20%  Similarity=0.286  Sum_probs=98.8

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+......   ....                                  
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~----------------------------------   53 (319)
T 4euu_A           11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVDV----------------------------------   53 (319)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---CHHH----------------------------------
T ss_pred             EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccc---hHHH----------------------------------
Confidence            34456899999999999996 469999999986432111   0000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc---c-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY---L-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~---~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      +..|...+.+    +.+ +  .+++++..   . ....++||||++|++|.+++.......     .+++..        
T Consensus        54 ~~~E~~~l~~----l~h-~--~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-----~~~~~~--------  113 (319)
T 4euu_A           54 QMREFEVLKK----LNH-K--NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY-----GLPESE--------  113 (319)
T ss_dssp             HHHHHHHHHH----CCC-T--TBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTT-----CCCHHH--------
T ss_pred             HHHHHHHHHh----cCC-C--CcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhcccc-----CCCHHH--------
Confidence            0122222222    222 2  23333322   1 235699999999999999987532110     011111        


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEE----ccCCcEEEEecccccccCH
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRY----TSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv----~~~g~l~l~DFGl~~~l~~  364 (433)
                      ...+..+++.+|.+||+.|++|+|+||+||++    +.++.++|+|||++..+..
T Consensus       114 ~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~  168 (319)
T 4euu_A          114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED  168 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence            12356678889999999999999999999999    6778899999999987654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.75  E-value=1.4e-18  Score=182.47  Aligned_cols=91  Identities=19%  Similarity=0.272  Sum_probs=73.7

Q ss_pred             CCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCc
Q 013944          256 PFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGI  333 (433)
Q Consensus       256 ~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~gi  333 (433)
                      .+..||+++..+  ....|||||||+|++|.+++......+        +      .     -+..+|+.+|.|+|+.||
T Consensus       300 ~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~--------~------~-----~I~~QIl~AL~ylH~~GI  360 (569)
T 4azs_A          300 AGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEID--------R------E-----KILGSLLRSLAALEKQGF  360 (569)
T ss_dssp             TTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCC--------H------H-----HHHHHHHHHHHHHHHTTC
T ss_pred             CCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCC--------H------H-----HHHHHHHHHHHHHHHCCc
Confidence            345678877654  467899999999999999997654332        1      1     145678899999999999


Q ss_pred             cccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          334 LHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       334 vH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +|||+||+|||++.+|++||+|||+++.+...
T Consensus       361 IHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~  392 (569)
T 4azs_A          361 WHDDVRPWNVMVDARQHARLIDFGSIVTTPQD  392 (569)
T ss_dssp             EESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred             eeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence            99999999999999999999999999887653

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.75  E-value=3.8e-20  Score=182.06  Aligned_cols=146  Identities=21%  Similarity=0.259  Sum_probs=98.2

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.+......  .+                                 ..-.
T Consensus        11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~---------------------------------~~~~   55 (336)
T 3h4j_B           11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK--SD---------------------------------MHMR   55 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TT---------------------------------CSHH
T ss_pred             EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc--hh---------------------------------HHHH
Confidence            44567899999999999995 689999999875321100  00                                 0000


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+. ++  .+++++..  ..+..++||||+ +++|.+++......+        +..        ..
T Consensus        56 ~~~E~~~l~----~l~-hp--nIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~--------~~~--------~~  111 (336)
T 3h4j_B           56 VEREISYLK----LLR-HP--HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMT--------EDE--------GR  111 (336)
T ss_dssp             HHHHHHHHT----TCC-CT--TBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCC--------HHH--------HH
T ss_pred             HHHHHHHHH----hCC-CC--CCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCC--------HHH--------HH
Confidence            122322221    122 22  23444433  335679999999 678888776543322        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++....
T Consensus       112 ~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~  159 (336)
T 3h4j_B          112 RFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT  159 (336)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred             HHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence            355678889999999999999999999999999999999999987654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.75  E-value=6.5e-19  Score=175.11  Aligned_cols=171  Identities=15%  Similarity=0.050  Sum_probs=99.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+...... ..+...++.++.++..+.                      
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~~~~l~----------------------  120 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS-RSELERLHEATFAAARLL----------------------  120 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH-HHHHHHHHHHHHHHHHHH----------------------
T ss_pred             eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccccc-ccHHHHHHHHHHHHHHhc----------------------
Confidence            34567899999999999996 589999999988754321 112222232222222210                      


Q ss_pred             hHHHHHHHHHHHHhcCCC-CCeEecee---ecc-------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhh
Q 013944          238 YTLEAANASEFQESHSPF-PFIHVPKV---FRY-------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQK  306 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~-~~v~vP~v---~~~-------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~  306 (433)
                       . .+.|+.++...+... ..+..+..   ...       .....+|||||++ ++|.+++........       ....
T Consensus       121 -~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~-------~~~~  190 (371)
T 3q60_A          121 -G-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYV-------FRGD  190 (371)
T ss_dssp             -C-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCC-------CCHH
T ss_pred             -c-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccc-------hhhh
Confidence             0 244544432222100 00100000   000       0033699999999 799999875421110       0000


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          307 LDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       307 ~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                        ....+...+..+++.+|.|||+.|++|+|+||+||+++.+|.++|+|||++.....
T Consensus       191 --~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~  246 (371)
T 3q60_A          191 --EGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT  246 (371)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTC
T ss_pred             --hhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCC
Confidence              00011123457788999999999999999999999999999999999999986653

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.75  E-value=4.3e-18  Score=166.27  Aligned_cols=188  Identities=17%  Similarity=0.173  Sum_probs=112.5

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+......-  ...                                  .+..
T Consensus        34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~----------------------------------~~~~   77 (327)
T 3lm5_A           34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD--CRA----------------------------------EILH   77 (327)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE--CHH----------------------------------HHHH
T ss_pred             cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH--HHH----------------------------------HHHH
Confidence            37899999999999996 4799999998765322110  000                                  0111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +.++++  +++++..  .....++||||++|++|.+++.......      +++..        ...+.
T Consensus        78 e~~~l~~----l~~~~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------~~~~~--------~~~i~  137 (327)
T 3lm5_A           78 EIAVLEL----AKSCPR--VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEM------VSEND--------VIRLI  137 (327)
T ss_dssp             HHHHHHH----TTTCTT--BCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CC------CCHHH--------HHHHH
T ss_pred             HHHHHHh----ccCCCC--EEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccC------CCHHH--------HHHHH
Confidence            2222222    222232  3333332  3456799999999999999875321110      11111        12355


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEcc---CCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTS---SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~---~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                      .++..+|.+||+.|++|+|+||+||+++.   +|.++|+|||++..+.......       ...+....++..+..-+..
T Consensus       138 ~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~-------~~~gt~~y~aPE~~~~~~~  210 (327)
T 3lm5_A          138 KQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR-------EIMGTPEYLAPEILNYDPI  210 (327)
T ss_dssp             HHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----------------CCCGGGCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc-------cccCCcCccCCeeecCCCC
Confidence            67888999999999999999999999987   7899999999998876543211       0112222233333333334


Q ss_pred             CCCCChHHHHHHHHHHh
Q 013944          396 RPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       396 ~~~~d~~~~~~~l~~~l  412 (433)
                      .+..|++.++..+.+++
T Consensus       211 ~~~~DiwslG~il~~ll  227 (327)
T 3lm5_A          211 TTATDMWNIGIIAYMLL  227 (327)
T ss_dssp             CTHHHHHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHH
Confidence            44556666555555544

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.75  E-value=1.8e-18  Score=169.39  Aligned_cols=157  Identities=19%  Similarity=0.207  Sum_probs=100.6

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|+||.||+|+..      +|+.||||+.++........   .                               
T Consensus        51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~---~-------------------------------   96 (343)
T 1luf_A           51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA---D-------------------------------   96 (343)
T ss_dssp             EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHH---H-------------------------------
T ss_pred             eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHH---H-------------------------------
Confidence            4568999999999999963      35899999988654322110   0                               


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCc--------h--h
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST--------H--L  302 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~--------~--~  302 (433)
                         +..|...+.+    +. ++  ++++++..  .....++||||++|++|.+++.............        .  .
T Consensus        97 ---~~~E~~~l~~----l~-hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T 1luf_A           97 ---FQREAALMAE----FD-NP--NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP  166 (343)
T ss_dssp             ---HHHHHHHHHT----CC-CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC--------------------
T ss_pred             ---HHHHHHHHHh----CC-CC--CEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCccccccccccccccccccccc
Confidence               1223333322    22 22  23344432  2456799999999999999987542111000000        0  0


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          303 DRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       303 ~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ....+....  ...+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+.
T Consensus       167 ~~~~l~~~~--~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  225 (343)
T 1luf_A          167 GPPPLSCAE--QLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY  225 (343)
T ss_dssp             --CCCCHHH--HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHT
T ss_pred             CCCCCCHHH--HHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccc
Confidence            000111111  12356778899999999999999999999999999999999999987653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.75  E-value=1.3e-18  Score=174.99  Aligned_cols=188  Identities=15%  Similarity=0.158  Sum_probs=113.2

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      +.||+|+||+||+|+. .+|+.||||+.+..  ....+++.++                                     
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~E~~~~-------------------------------------  108 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELH-------------------------------------  108 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHH-------------------------------------
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcc--hhHHHHHHHH-------------------------------------
Confidence            5799999999999996 47999999998632  1111121111                                     


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeeccc---CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYL---SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                          .+   ...+.+-+.+-.++...   ....+|||||++|++|.+++.......      +++..        ...+.
T Consensus       109 ----~~---~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~------l~~~~--------~~~i~  167 (400)
T 1nxk_A          109 ----WR---ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA------FTERE--------ASEIM  167 (400)
T ss_dssp             ----HH---HTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---C------CBHHH--------HHHHH
T ss_pred             ----HH---hcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCC------CCHHH--------HHHHH
Confidence                11   11111112222222211   234689999999999999987532111      11111        12356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEcc---CCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTS---SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~---~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                      .++..+|.|||+.|++|+|+||+||+++.   ++.++|+|||+++.........   ...    +....++..+..-+..
T Consensus       168 ~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~---~~~----gt~~y~aPE~~~~~~~  240 (400)
T 1nxk_A          168 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT---TPC----YTPYYVAPEVLGPEKY  240 (400)
T ss_dssp             HHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC------------------CTTCCGGGSCCCCS
T ss_pred             HHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccc---cCC----CCCCccCHhhcCCCCC
Confidence            77888999999999999999999999987   7899999999998876543211   000    1111222222223334


Q ss_pred             CCCCChHHHHHHHHHHh-hchhc
Q 013944          396 RPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       396 ~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      ....|+|+++..+.+++ |...|
T Consensus       241 ~~~~DiwslG~il~ell~g~~pf  263 (400)
T 1nxk_A          241 DKSCDMWSLGVIMYILLCGYPPF  263 (400)
T ss_dssp             SSHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCcccHHHHHHHHHHHHhCCCCC
Confidence            55667777777776665 44444

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.75  E-value=1.4e-19  Score=170.74  Aligned_cols=144  Identities=21%  Similarity=0.197  Sum_probs=101.1

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|++|.||+|+..+++.||||+.++.....  .                                     ++.
T Consensus        11 ~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~--~-------------------------------------~~~   51 (267)
T 3t9t_A           11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--E-------------------------------------DFI   51 (267)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH--H-------------------------------------HHH
T ss_pred             eeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCH--H-------------------------------------HHH
Confidence            3456899999999999998889999999987643221  0                                     011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +. ++  .+++++..  .....+++|||++|++|.+++....+.       .++..       + ..+
T Consensus        52 ~e~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-------~~~~~-------~-~~~  109 (267)
T 3t9t_A           52 EEAEVMMK----LS-HP--KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL-------FAAET-------L-LGM  109 (267)
T ss_dssp             HHHHHHHT----CC-CT--TBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTC-------CCHHH-------H-HHH
T ss_pred             HHHHHHHh----CC-CC--CEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCccc-------CCHHH-------H-HHH
Confidence            22222222    22 22  23334332  235679999999999999998654211       11111       1 224


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.++.+||+.|++|+|+||.||+++.++.++|+|||++.....
T Consensus       110 ~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  156 (267)
T 3t9t_A          110 CLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  156 (267)
T ss_dssp             HHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             HHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccc
Confidence            56788899999999999999999999999999999999999987644

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.75  E-value=3.5e-17  Score=156.93  Aligned_cols=152  Identities=16%  Similarity=0.167  Sum_probs=102.0

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhH-HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVV-VRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~-~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...+.||+|++|.||+|+. .+|+.||||+.+....... ..+....                        ...      
T Consensus        20 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~------------------------~~~------   69 (298)
T 1phk_A           20 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQEL------------------------REA------   69 (298)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHH------------------------HHH------
T ss_pred             ceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHH------------------------HHH------
Confidence            3457899999999999996 4789999999865431110 0000000                        011      


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.++    .++++  +++++..  .....++||||++|++|.+++......+        +..        ..
T Consensus        70 ~~~e~~~l~~l----~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~  127 (298)
T 1phk_A           70 TLKEVDILRKV----SGHPN--IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS--------EKE--------TR  127 (298)
T ss_dssp             HHHHHHHHHHH----TTCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCC--------HHH--------HH
T ss_pred             HHHHHHHHHHh----cCCCC--EeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCC--------HHH--------HH
Confidence            12233333333    12232  3333332  3356799999999999999987543322        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..++.+||+.|++|+|++|.||+++.+|.++|+|||++..+.
T Consensus       128 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  175 (298)
T 1phk_A          128 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD  175 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence            356678889999999999999999999999999999999999987653

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.75  E-value=3.2e-18  Score=163.11  Aligned_cols=145  Identities=21%  Similarity=0.215  Sum_probs=92.1

Q ss_pred             CCccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+.||+|+||+||+|+..    .+..||||+.+.........                                     
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------------------   61 (281)
T 1mp8_A           19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-------------------------------------   61 (281)
T ss_dssp             EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHH-------------------------------------
T ss_pred             EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHH-------------------------------------
Confidence            4568999999999999863    35679999987543221110                                     


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      .+..|...+.+    +. ++  ++++++..+ ....++||||++|++|.+++......       +++..        ..
T Consensus        62 ~~~~e~~~l~~----l~-h~--~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~--------~~  119 (281)
T 1mp8_A           62 KFLQEALTMRQ----FD-HP--HIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYS-------LDLAS--------LI  119 (281)
T ss_dssp             HHHHHHHHHHT----CC-CT--TBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTT-------SCHHH--------HH
T ss_pred             HHHHHHHHHHh----CC-CC--ccceEEEEEccCccEEEEecCCCCCHHHHHHhcCCC-------CCHHH--------HH
Confidence            01223333222    22 22  233444332 35678999999999999998653210       11111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+..
T Consensus       120 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A          120 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  168 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             HHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence            3556788899999999999999999999999999999999999987654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.75  E-value=8.2e-19  Score=175.46  Aligned_cols=144  Identities=19%  Similarity=0.229  Sum_probs=88.3

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.........  +....                                 
T Consensus        11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~~~~---------------------------------   55 (388)
T 3oz6_A           11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST--DAQRT---------------------------------   55 (388)
T ss_dssp             EEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHH--HHHHH---------------------------------
T ss_pred             eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChH--HHHHH---------------------------------
Confidence            34457899999999999995 5899999998764322210  11000                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                       ..|...+.+    +.++++  +++++..+    ....++||||++| +|.+++... ..+        +.        .
T Consensus        56 -~~E~~~l~~----l~~h~n--iv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~--------~~--------~  110 (388)
T 3oz6_A           56 -FREIMILTE----LSGHEN--IVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRAN-ILE--------PV--------H  110 (388)
T ss_dssp             -HHHHHHHHH----TTTCTT--BCCEEEEEECTTSSCEEEEEECCSE-EHHHHHHHT-CCC--------HH--------H
T ss_pred             -HHHHHHHHh----ccCCCC--CCeeeeEEecCCCCEEEEEecccCc-CHHHHHHcC-CCC--------HH--------H
Confidence             112222221    222222  33333322    2356999999985 777777532 111        11        1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ...+..++..+|.+||+.|++|||+||+||+++.+|.++|+|||+++.+
T Consensus       111 ~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A          111 KQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred             HHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence            1235567888999999999999999999999999999999999999865

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.75  E-value=1.2e-19  Score=173.92  Aligned_cols=142  Identities=20%  Similarity=0.225  Sum_probs=96.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|+||+|+. .+|+.||||+.+....     ....+                                  .
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~----------------------------------~   50 (303)
T 1zy4_A           10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-----KLSTI----------------------------------L   50 (303)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHH-----HHHHH----------------------------------H
T ss_pred             hhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHH-----HHHHH----------------------------------H
Confidence            456899999999999996 5899999998853211     11111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc---------------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhh
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY---------------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDR  304 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~---------------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~  304 (433)
                      .|...+.+    +. ++  .+.+++..               .....++||||++|++|.+++.....       ..++.
T Consensus        51 ~E~~~l~~----l~-h~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------~~~~~  116 (303)
T 1zy4_A           51 SEVMLLAS----LN-HQ--YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL-------NQQRD  116 (303)
T ss_dssp             HHHHHHTT----CC-CT--TBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCG-------GGCHH
T ss_pred             HHHHHHHh----cC-ch--HHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcccc-------ccchH
Confidence            12222111    11 11  12222221               13456999999999999999864321       01111


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          305 QKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       305 ~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                             .+ ..+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       117 -------~~-~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  167 (303)
T 1zy4_A          117 -------EY-WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH  167 (303)
T ss_dssp             -------HH-HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTT
T ss_pred             -------HH-HHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcc
Confidence                   11 2255678899999999999999999999999999999999999998765

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.75  E-value=2.6e-18  Score=162.46  Aligned_cols=147  Identities=22%  Similarity=0.221  Sum_probs=89.8

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|++|.||+|+. +|+.||||+.+.............+                                  .
T Consensus        10 ~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~----------------------------------~   54 (271)
T 3dtc_A           10 TLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENV----------------------------------R   54 (271)
T ss_dssp             EEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHH----------------------------------H
T ss_pred             eeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHH----------------------------------H
Confidence            3456899999999999986 5899999998754332211111111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.    .+. ++  .+++++..  .....++||||++|++|.+++... ..        ++..        ...+
T Consensus        55 ~e~~~l~----~l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~--------~~~~--------~~~i  110 (271)
T 3dtc_A           55 QEAKLFA----MLK-HP--NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RI--------PPDI--------LVNW  110 (271)
T ss_dssp             HHHHHHH----HCC-CT--TBCCEEEEECCC--CEEEEECCTTEEHHHHHTSS-CC--------CHHH--------HHHH
T ss_pred             HHHHHHH----hcC-CC--CEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcC-CC--------CHHH--------HHHH
Confidence            2222222    222 22  23333332  235569999999999999887532 11        1111        1235


Q ss_pred             HHHHHHHHHHHHHCC---ccccCCCCCceEEcc--------CCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETG---ILHADPHPGNLRYTS--------SGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~g---ivH~DlhpgNilv~~--------~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..++.+||+.|   ++|+|+||+||+++.        ++.++|+|||++..+...
T Consensus       111 ~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~  169 (271)
T 3dtc_A          111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT  169 (271)
T ss_dssp             HHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------
T ss_pred             HHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc
Confidence            567888999999999   899999999999986        688999999999876543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.74  E-value=3.4e-18  Score=165.15  Aligned_cols=148  Identities=20%  Similarity=0.265  Sum_probs=97.3

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCc--------hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL--------RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELG  229 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~--------~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~  229 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+...        .....+++.+++                        
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~------------------------   66 (308)
T 3g33_A           11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR------------------------   66 (308)
T ss_dssp             CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHH------------------------
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHH------------------------
Confidence            33457899999999999995 689999999875321        122222332222                        


Q ss_pred             HHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCC----ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhh
Q 013944          230 KGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR----KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQ  305 (433)
Q Consensus       230 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~----~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~  305 (433)
                                       ++.. +.+.+-+.+-.++....+    ..++||||++| +|.+++.......      +++..
T Consensus        67 -----------------~l~~-~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~------~~~~~  121 (308)
T 3g33_A           67 -----------------RLEA-FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG------LPAET  121 (308)
T ss_dssp             -----------------HHHH-HCCTTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTC------SCHHH
T ss_pred             -----------------HHhh-cCCCCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCC------CCHHH
Confidence                             2211 111111222222221111    35899999985 8888876543211      11111


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          306 KLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       306 ~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                              ...+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+.
T Consensus       122 --------~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  171 (308)
T 3g33_A          122 --------IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS  171 (308)
T ss_dssp             --------HHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTST
T ss_pred             --------HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccC
Confidence                    12356678889999999999999999999999999999999999987654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.74  E-value=3.9e-18  Score=165.35  Aligned_cols=213  Identities=17%  Similarity=0.124  Sum_probs=124.6

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+.. +|+.||||+.......... ....                                   .
T Consensus        61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~-----------------------------------~  104 (311)
T 3p1a_A           61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARK-----------------------------------L  104 (311)
T ss_dssp             EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHH-----------------------------------H
T ss_pred             eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHH-----------------------------------H
Confidence            4568999999999999974 8999999987654332111 0001                                   1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+   .... .+++  +++++.  ...+..+|||||+ +++|.+++......       +++..        ...+
T Consensus       105 ~e~~~~---~~~~-~h~~--iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-------l~~~~--------~~~i  162 (311)
T 3p1a_A          105 AEVGSH---EKVG-QHPC--CVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGAS-------LPEAQ--------VWGY  162 (311)
T ss_dssp             HHHHHH---HHHC-CCTT--BCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSC-------CCHHH--------HHHH
T ss_pred             HHHHHH---HHhc-CCCc--EEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCC-------CCHHH--------HHHH
Confidence            111111   1111 2222  223332  2346679999999 56888777543210       11111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHH---------HHH--HHHHhcCHHHHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAML---------ASI--VHIVNGDWQSLV  386 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~---------~~~--~~~~~~d~~~~~  386 (433)
                      ..+++.+|.+||+.|++|+|+||+||+++.++.++|+|||++............         +.+  ......|.|+++
T Consensus       163 ~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG  242 (311)
T 3p1a_A          163 LRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLG  242 (311)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHH
Confidence            667888999999999999999999999999999999999998876543221100         000  001234777777


Q ss_pred             HHHHhcCCC-CCCCChH----------------HHHHHHHHHhhchhccCCCCCcccccccc
Q 013944          387 HSLTEMDVV-RPGTNTL----------------RVTMDLEDALGEVEFKDGIPDVKFSRVRS  431 (433)
Q Consensus       387 ~~l~~~g~~-~~~~d~~----------------~~~~~l~~~l~~~~~~~~~~~~~~~~~l~  431 (433)
                      ..+++|-.. .+..+..                .+..++.+++...+..+|-.+.++.++|.
T Consensus       243 ~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          243 LTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            777775221 1111110                11234555565555556666666666654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.74  E-value=1.4e-19  Score=176.15  Aligned_cols=149  Identities=18%  Similarity=0.180  Sum_probs=99.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+.........+                  ....              .+.
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~------------------~~~~--------------~~~   63 (321)
T 2a2a_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG------------------VSRE--------------EIE   63 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSS------------------BCHH--------------HHH
T ss_pred             EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccc------------------hhHH--------------HHH
Confidence            456899999999999996 4799999998765322110000                  0000              012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.+    +. +++  +++++..  .....++||||++|++|.+++......        ++..        ...+
T Consensus        64 ~E~~~l~~----l~-h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--------~~~~--------~~~i  120 (321)
T 2a2a_A           64 REVSILRQ----VL-HHN--VITLHDVYENRTDVVLILELVSGGELFDFLAQKESL--------SEEE--------ATSF  120 (321)
T ss_dssp             HHHHHHHH----CC-CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCE--------EHHH--------HHHH
T ss_pred             HHHHHHHh----CC-CCC--cceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCC--------CHHH--------HHHH
Confidence            23222222    22 222  3333332  345679999999999999998643221        1211        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCC----cEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSG----QIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g----~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|+||+||+++.++    .++|+|||++..+..
T Consensus       121 ~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~  171 (321)
T 2a2a_A          121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED  171 (321)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCc
Confidence            56788899999999999999999999999887    799999999987643

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.74  E-value=5.5e-19  Score=177.79  Aligned_cols=210  Identities=18%  Similarity=0.203  Sum_probs=114.3

Q ss_pred             CCChhhhccccCCccccccccceeEEEEec---CCCEEEEEEcCCC-chhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHH
Q 013944          150 GSPVESFFSFISEEPVAAASFGQVYRGSTL---DGSIVAVKVQRPN-LRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYA  225 (433)
Q Consensus       150 g~~~~~~f~~~~~~pigsgS~gqVy~a~l~---~G~~VAVKv~~p~-~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~  225 (433)
                      ...+.+.|.. ..+.||+|+||.||+|+.+   +|+.||||+.... ....+.+++.+++                    
T Consensus        15 ~~~~~~~y~~-~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~--------------------   73 (405)
T 3rgf_A           15 RERVEDLFEY-EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLR--------------------   73 (405)
T ss_dssp             CCCHHHHEEC-SSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHH--------------------
T ss_pred             hhhhhhhhhh-cCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHH--------------------
Confidence            4567777753 4568999999999999964   6889999988643 2333333333322                    


Q ss_pred             HHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeec-ccCCceEEEeeccCCCCcchhhhhccCCCC-CCCCchhh
Q 013944          226 DELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFR-YLSRKRVLTMEWMVGESPTDLISLSTGSSV-DGSSTHLD  303 (433)
Q Consensus       226 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~-~~~~~~~~  303 (433)
                                           +    +.+.+-+.+-.++. ......+|||||++| +|.+++........ .....++ 
T Consensus        74 ---------------------~----l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~-  126 (405)
T 3rgf_A           74 ---------------------E----LKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP-  126 (405)
T ss_dssp             ---------------------H----CCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CC-
T ss_pred             ---------------------h----cCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCC-
Confidence                                 1    22222122222222 124567999999986 66666643211000 0000011 


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEE----ccCCcEEEEecccccccCHHHHHHHHHHHHHHHh
Q 013944          304 RQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRY----TSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVN  379 (433)
Q Consensus       304 ~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv----~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~  379 (433)
                             ......+..+++.+|.+||+.|++|+|+||+||++    +.++.++|+|||++..+.........  . ....
T Consensus       127 -------~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~--~-~~~~  196 (405)
T 3rgf_A          127 -------RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD--L-DPVV  196 (405)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-------------------
T ss_pred             -------HHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCccccc--C-CCce
Confidence                   11223466778899999999999999999999999    67789999999999877543211000  0 0011


Q ss_pred             cCH-HHHHHHHHhcCCCCCCCChHHHHHHHHHHh-hchhc
Q 013944          380 GDW-QSLVHSLTEMDVVRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       380 ~d~-~~~~~~l~~~g~~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      +.. +...+.+...+......|+|+++..+.+++ |..+|
T Consensus       197 gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf  236 (405)
T 3rgf_A          197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF  236 (405)
T ss_dssp             CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCC
Confidence            122 222233333333556677777777776665 45455

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.74  E-value=3.8e-18  Score=162.27  Aligned_cols=146  Identities=18%  Similarity=0.175  Sum_probs=93.7

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCch-hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLR-HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~-~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      +...+.||+|++|.||+|+. +|+.||||+.+.... +.+                                        
T Consensus        23 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~----------------------------------------   61 (278)
T 1byg_A           23 LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAF----------------------------------------   61 (278)
T ss_dssp             EEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--HHH----------------------------------------
T ss_pred             ceEEeEEecCCCceEEEEEE-cCCEEEEEEecchhHHHHH----------------------------------------
Confidence            33456899999999999986 689999999875421 111                                        


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                       ..|...+.    .+.+.+-+.+-..+.......++||||++|++|.+++.....            ......  ....+
T Consensus        62 -~~E~~~l~----~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~------------~~~~~~--~~~~~  122 (278)
T 1byg_A           62 -LAEASVMT----QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR------------SVLGGD--CLLKF  122 (278)
T ss_dssp             -HHTHHHHT----TCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH------------HHCCHH--HHHHH
T ss_pred             -HHHHHHHH----hCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc------------ccCCHH--HHHHH
Confidence             11222221    122222222222222223457999999999999998864311            001111  11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++.....
T Consensus       123 ~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A          123 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             HHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence            56788899999999999999999999999999999999999876654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.74  E-value=4.6e-18  Score=180.30  Aligned_cols=143  Identities=17%  Similarity=0.145  Sum_probs=97.4

Q ss_pred             cccccccceeEEEEec---CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          164 PVAAASFGQVYRGSTL---DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       164 pigsgS~gqVy~a~l~---~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .||+|+||+||+|+.+   ++..||||+.+........   ..                                  +..
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~---~~----------------------------------~~~  385 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT---EE----------------------------------MMR  385 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTH---HH----------------------------------HHH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHH---HH----------------------------------HHH
Confidence            6999999999999863   5678999999865322100   00                                  122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |++.+.+    +.+ +  ++.+++..+ ....++||||++|++|.+++.....       .+++..        ...+..
T Consensus       386 E~~il~~----l~h-p--niv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~-------~l~~~~--------~~~i~~  443 (613)
T 2ozo_A          386 EAQIMHQ----LDN-P--YIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE-------EIPVSN--------VAELLH  443 (613)
T ss_dssp             HHHHHTT----CCC-T--TBCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTT-------TSCHHH--------HHHHHH
T ss_pred             HHHHHHh----CCC-C--CEeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccC-------CCCHHH--------HHHHHH
Confidence            3332222    222 2  233333322 2557999999999999998864321       011111        123566


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +++.+|.+||+.|++|+|+||+||+++.++.++|+|||+++.+...
T Consensus       444 qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          444 QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             HHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            7889999999999999999999999999999999999999887543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=1.4e-18  Score=172.86  Aligned_cols=147  Identities=21%  Similarity=0.243  Sum_probs=91.2

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...++||+|+||+||+|+. .+|+.||||+.........  ....+                                  
T Consensus        28 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~--~~~~~----------------------------------   71 (367)
T 1cm8_A           28 RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL--FAKRA----------------------------------   71 (367)
T ss_dssp             EEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHH--HHHHH----------------------------------
T ss_pred             EEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHH--HHHHH----------------------------------
Confidence            3457899999999999996 5899999998864322110  00001                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc-----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL-----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      .+|.+.+..    +.+.+-+.+-.++..-     .+..++||||+ |++|.+++... ..+        +.        .
T Consensus        72 ~~E~~~l~~----l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~l~--------~~--------~  129 (367)
T 1cm8_A           72 YRELRLLKH----MRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE-KLG--------ED--------R  129 (367)
T ss_dssp             HHHHHHHHH----CCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHC-CCC--------HH--------H
T ss_pred             HHHHHHHHh----CCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcC-CCC--------HH--------H
Confidence            112222222    2222212222222211     13459999999 78998887642 111        11        1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ...+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||+++....
T Consensus       130 ~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  180 (367)
T 1cm8_A          130 IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS  180 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence            123567788999999999999999999999999999999999999987643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.74  E-value=9.3e-19  Score=172.57  Aligned_cols=78  Identities=18%  Similarity=0.127  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH---------------HHHHHHHHHHHhc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------------FAMLASIVHIVNG  380 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------------~~~~~~~~~~~~~  380 (433)
                      .+..+++.+|.+||+.|++|+|+||.||+++.++.++|+|||++..+.....               ......-......
T Consensus       197 ~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  276 (359)
T 3vhe_A          197 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS  276 (359)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchh
Confidence            3566788999999999999999999999999999999999999875522110               1111111112355


Q ss_pred             CHHHHHHHHHhcC
Q 013944          381 DWQSLVHSLTEMD  393 (433)
Q Consensus       381 d~~~~~~~l~~~g  393 (433)
                      |.|+++..+++|-
T Consensus       277 Di~slG~il~ell  289 (359)
T 3vhe_A          277 DVWSFGVLLWEIF  289 (359)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             hhhhHHHHHHHHH
Confidence            7888888887763

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.74  E-value=2.4e-18  Score=165.21  Aligned_cols=138  Identities=21%  Similarity=0.180  Sum_probs=94.8

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|+||.||+|+. +|+.||||+.++........+..++.                                   
T Consensus        12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~-----------------------------------   55 (301)
T 3q4u_A           12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYN-----------------------------------   55 (301)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHH-----------------------------------
T ss_pred             EEEeeccCCCcEEEEEEE-CCEEEEEEEeccccchhhHHHHHHHH-----------------------------------
Confidence            456899999999999987 79999999987543322111111111                                   


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                               ...-.+++  +.+++..      .....++||||++|++|.+++... .        +++...        
T Consensus        56 ---------~~~l~h~n--iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~--------~~~~~~--------  107 (301)
T 3q4u_A           56 ---------TVMLRHEN--ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT-T--------LDTVSC--------  107 (301)
T ss_dssp             ---------HTCCCCTT--BCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC-C--------BCHHHH--------
T ss_pred             ---------HhhccCcC--eeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc-c--------cCHHHH--------
Confidence                     01011222  2233321      123468999999999999998532 1        111111        


Q ss_pred             HHHHHHHHHHHHHHH--------HCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          315 DLVNKGVEATLVQLL--------ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh--------~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..+..++..++.+||        +.|++|+|+||+||+++.++.++|+|||++...
T Consensus       108 ~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~  163 (301)
T 3q4u_A          108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH  163 (301)
T ss_dssp             HHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence            235567888999999        999999999999999999999999999998543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.74  E-value=4e-18  Score=165.08  Aligned_cols=149  Identities=18%  Similarity=0.260  Sum_probs=97.8

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|+||+|+. .+|+.||||+.+......-.    ..                         ..      
T Consensus        36 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~----~~-------------------------~~------   80 (309)
T 2h34_A           36 YRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPV----FR-------------------------TR------   80 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHH----HH-------------------------HH------
T ss_pred             EEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHH----HH-------------------------HH------
Confidence            44567899999999999996 47899999998754322100    00                         00      


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+. ++  .+++++..  .....+++|||++|++|.+++......+        +..        ..
T Consensus        81 ~~~e~~~l~----~l~-hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~  137 (309)
T 2h34_A           81 MQREARTAG----RLQ-EP--HVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLA--------PPR--------AV  137 (309)
T ss_dssp             HHHHHHHHT----TCC-CT--TBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCC--------HHH--------HH
T ss_pred             HHHHHHHHh----hcC-CC--CeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCC--------HHH--------HH
Confidence            112222221    122 22  23333332  2466799999999999999987543222        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++......
T Consensus       138 ~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          138 AIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             HHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            35567888999999999999999999999999999999999998876543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.74  E-value=3.9e-18  Score=181.43  Aligned_cols=143  Identities=17%  Similarity=0.206  Sum_probs=98.5

Q ss_pred             ccccccccceeEEEEe---cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          163 EPVAAASFGQVYRGST---LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l---~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      +.||+|+||.||+|.+   .+++.||||+.+.......  ...                                  ++.
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~--~~~----------------------------------~~~  418 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA--LKD----------------------------------ELL  418 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGG--GHH----------------------------------HHH
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHH--HHH----------------------------------HHH
Confidence            4699999999999965   3578999999875432210  000                                  012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      .|+..+.++    .+ ++  +.+++..+ ....+|||||++|++|.+++......+        +..        ...+.
T Consensus       419 ~E~~il~~l----~h-pn--Iv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~--------~~~--------~~~i~  475 (635)
T 4fl3_A          419 AEANVMQQL----DN-PY--IVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK--------DKN--------IIELV  475 (635)
T ss_dssp             HHHHHHHHC----CC-TT--BCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCC--------HHH--------HHHHH
T ss_pred             HHHHHHHhC----CC-CC--EeeEEEEEecCCEEEEEEccCCCCHHHHHhhCCCCC--------HHH--------HHHHH
Confidence            233333222    22 22  23333222 345689999999999999986543222        111        12356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+++.+|.|||+.|++|+|+||+||+++.++.++|+|||+++.+..
T Consensus       476 ~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  521 (635)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred             HHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence            6788999999999999999999999999999999999999987654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.74  E-value=2.3e-19  Score=184.06  Aligned_cols=191  Identities=17%  Similarity=0.166  Sum_probs=107.3

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.........  +...+                                  .
T Consensus        66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~--~~~~~----------------------------------~  109 (464)
T 3ttj_A           66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT--HAKRA----------------------------------Y  109 (464)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHH--HHHHH----------------------------------H
T ss_pred             EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChH--HHHHH----------------------------------H
Confidence            457899999999999985 5899999998865322110  00001                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc-----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY-----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~-----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      .|...+.    .+.+.+-+.+-.++..     .....+|||||++|+ +.+.+..  ..        ++.        ..
T Consensus       110 ~E~~~l~----~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~~~--~l--------~~~--------~~  166 (464)
T 3ttj_A          110 RELVLMK----CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQM--EL--------DHE--------RM  166 (464)
T ss_dssp             HHHHHHH----HCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHHTS--CC--------CHH--------HH
T ss_pred             HHHHHHH----hCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCC-HHHHHhh--cC--------CHH--------HH
Confidence            1222111    1222221222222211     113459999999975 4444321  11        111        11


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      ..+..++..+|.|||+.|++|||+||+||+++.+|.++|+|||+++........   .   ......++...+.+... .
T Consensus       167 ~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---~---~~~gt~~y~aPE~~~~~-~  239 (464)
T 3ttj_A          167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---T---PYVVTRYYRAPEVILGM-G  239 (464)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----------CCCTTCCHHHHTTC-C
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCccc---C---CCcccccccCHHHHcCC-C
Confidence            235667889999999999999999999999999999999999999876542110   0   00111112222233232 2


Q ss_pred             CCCCCChHHHHHHHHHHh-hchhc
Q 013944          395 VRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      .....|+|+++-.+.+++ |..+|
T Consensus       240 ~~~~~DiwSlG~il~ell~g~~pF  263 (464)
T 3ttj_A          240 YKENVDIWSVGCIMGEMVRHKILF  263 (464)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCHHHHHHHHHHHHHHHHhCCCCC
Confidence            345667776666666555 34443

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.74  E-value=2e-18  Score=172.21  Aligned_cols=173  Identities=20%  Similarity=0.175  Sum_probs=114.0

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+.+ +|+.||||+.+........                                     -+|.
T Consensus       118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~~~  160 (377)
T 3cbl_A          118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK-------------------------------------AKFL  160 (377)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHH-------------------------------------TTTT
T ss_pred             EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHH-------------------------------------HHHH
Confidence            3568999999999999975 8999999998765432110                                     0123


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|++.+.++    .   +-++++++..+  ....++||||++|++|.+++.....             .+.... + ..+
T Consensus       161 ~E~~~l~~l----~---hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~-~-~~~  218 (377)
T 3cbl_A          161 QEARILKQY----S---HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-------------RLRVKT-L-LQM  218 (377)
T ss_dssp             HHHHHHTTC----C---CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGG-------------GCCHHH-H-HHH
T ss_pred             HHHHHHHhC----C---CCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCC-------------CCCHHH-H-HHH
Confidence            344333222    1   22344444433  3567999999999999999864321             011111 1 235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH---------------HHHHHHHHHHHHhcCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH---------------QFAMLASIVHIVNGDW  382 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~---------------~~~~~~~~~~~~~~d~  382 (433)
                      ..+++.++.+||+.|++|+|+||+||+++.+|.++|+|||+++......               .+.....-......|.
T Consensus       219 ~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  298 (377)
T 3cbl_A          219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV  298 (377)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHH
T ss_pred             HHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhH
Confidence            5678889999999999999999999999999999999999986532110               0111111011234688


Q ss_pred             HHHHHHHHhc
Q 013944          383 QSLVHSLTEM  392 (433)
Q Consensus       383 ~~~~~~l~~~  392 (433)
                      |+++..++++
T Consensus       299 wslG~il~el  308 (377)
T 3cbl_A          299 WSFGILLWET  308 (377)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8888888775

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.74  E-value=3.2e-18  Score=165.69  Aligned_cols=143  Identities=20%  Similarity=0.248  Sum_probs=95.9

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|+||.||+|+. .|+.||||+........      .                                  +..
T Consensus        12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~------~----------------------------------~~~   50 (307)
T 2eva_A           12 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESERK------A----------------------------------FIV   50 (307)
T ss_dssp             EEEEEECCSSSEEEEEEE-TTEEEEEEECSSTTHHH------H----------------------------------HHH
T ss_pred             eeeEeecCCCceEEEEEE-CCeeEEEEEecChhHHH------H----------------------------------HHH
Confidence            456899999999999987 58899999986432110      0                                  122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      |.+.+.++    .   +-++.+++..+....++||||++|++|.+++......+     ......       . ..+..+
T Consensus        51 E~~~l~~l----~---hp~iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-----~~~~~~-------~-~~~~~q  110 (307)
T 2eva_A           51 ELRQLSRV----N---HPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLP-----YYTAAH-------A-MSWCLQ  110 (307)
T ss_dssp             HHHHHHHC----C---CTTBCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEE-----CCCHHH-------H-HHHHHH
T ss_pred             HHHHHhcC----C---CCCcCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCC-----ccCHHH-------H-HHHHHH
Confidence            33332222    1   22345566666677899999999999999987532211     011111       1 124556


Q ss_pred             HHHHHHHHHH---CCccccCCCCCceEEccCCc-EEEEecccccccCH
Q 013944          321 VEATLVQLLE---TGILHADPHPGNLRYTSSGQ-IGFLDFGLLCRMER  364 (433)
Q Consensus       321 i~~~l~~lh~---~givH~DlhpgNilv~~~g~-l~l~DFGl~~~l~~  364 (433)
                      +..++.+||.   .|++|+|+||.||+++.+|. ++|+|||++..+..
T Consensus       111 i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~  158 (307)
T 2eva_A          111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT  158 (307)
T ss_dssp             HHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred             HHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence            7889999999   89999999999999998886 79999999976654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.74  E-value=1.1e-19  Score=181.80  Aligned_cols=146  Identities=12%  Similarity=0.068  Sum_probs=99.0

Q ss_pred             ccCCcccccc--ccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          159 FISEEPVAAA--SFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       159 ~~~~~pigsg--S~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      |...+.||+|  ++|.||+|+.+ +|+.||||+.+......  .....+                               
T Consensus        27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~-------------------------------   73 (389)
T 3gni_B           27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN--EMVTFL-------------------------------   73 (389)
T ss_dssp             EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH--HHHHHH-------------------------------
T ss_pred             EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh--HHHHHH-------------------------------
Confidence            4456789999  99999999964 89999999986532211  011111                               


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                         ..|...+.+    +. +++  +.+++..  .....++||||++|++|.+++.......      +++.        .
T Consensus        74 ---~~E~~~l~~----l~-h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~--------~  129 (389)
T 3gni_B           74 ---QGELHVSKL----FN-HPN--IVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG------MNEL--------A  129 (389)
T ss_dssp             ---HHHHHHHHH----CC-CTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTC------CCHH--------H
T ss_pred             ---HHHHHHHHh----CC-CCC--CCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccC------CCHH--------H
Confidence               112222222    22 222  2333322  2456799999999999999987542111      1111        1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      ...+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||.+..
T Consensus       130 ~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B          130 IAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             HHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence            123566788999999999999999999999999999999999998643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.74  E-value=1.8e-19  Score=175.31  Aligned_cols=146  Identities=22%  Similarity=0.289  Sum_probs=88.3

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchh----hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRH----VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~----~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.+.....    .+.+                                  
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~----------------------------------   52 (317)
T 2pmi_A            7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR----------------------------------   52 (317)
T ss_dssp             ------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHH----------------------------------
T ss_pred             eeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHH----------------------------------
Confidence            34457899999999999995 57999999987643321    1111                                  


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                             |...+.    .+   .+-.+++++..+  ....++||||++| +|.+++.........  ...++        
T Consensus        53 -------E~~~l~----~l---~hp~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~--~~~~~--------  107 (317)
T 2pmi_A           53 -------EISLMK----EL---KHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTP--RGLEL--------  107 (317)
T ss_dssp             -------HHHHHT----TC---CBTTBCCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCC--CCCCH--------
T ss_pred             -------HHHHHH----hc---CCCCcceEEEEEEECCeEEEEEEecCC-CHHHHHHhccccccc--cCCCH--------
Confidence                   221111    11   122234444332  3566999999995 888887643211100  00111        


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .....+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       108 ~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A          108 NLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            1123356678899999999999999999999999999999999999987653

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.74  E-value=8e-19  Score=174.49  Aligned_cols=149  Identities=21%  Similarity=0.234  Sum_probs=98.1

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|+||.||+|++.      +++.||||+.+.........                                   
T Consensus        75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~-----------------------------------  119 (367)
T 3l9p_A           75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-----------------------------------  119 (367)
T ss_dssp             EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHH-----------------------------------
T ss_pred             EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHH-----------------------------------
Confidence            3568999999999999852      56789999987543322110                                   


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                        ++..|...+.++    . ++  .+++++..  .....++||||++|++|.+++......... ...++...       
T Consensus       120 --~~~~E~~~l~~l----~-hp--nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~-~~~~~~~~-------  182 (367)
T 3l9p_A          120 --DFLMEALIISKF----N-HQ--NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ-PSSLAMLD-------  182 (367)
T ss_dssp             --HHHHHHHHHHHC----C-CT--TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSS-CCCCCHHH-------
T ss_pred             --HHHHHHHHHHhC----C-CC--CCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCc-cccccHHH-------
Confidence              112233332222    2 22  23333332  235669999999999999999765422100 01111111       


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC---cEEEEeccccccc
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QIGFLDFGLLCRM  362 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g---~l~l~DFGl~~~l  362 (433)
                      + ..+..+++.+|.+||+.|++|+|+||+||+++.+|   .++|+|||+++.+
T Consensus       183 ~-~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~  234 (367)
T 3l9p_A          183 L-LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI  234 (367)
T ss_dssp             H-HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred             H-HHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence            1 23566788899999999999999999999999655   4999999998744

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.74  E-value=1.6e-18  Score=169.38  Aligned_cols=141  Identities=16%  Similarity=0.256  Sum_probs=97.3

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCc-hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL-RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~-~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+..... .+.+..                                      
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~--------------------------------------   53 (330)
T 2izr_A           12 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL--------------------------------------   53 (330)
T ss_dssp             EEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHH--------------------------------------
T ss_pred             EEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHH--------------------------------------
Confidence            3456899999999999995 689999999875332 222222                                      


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                         |...+.++    .++++  +++++..  .....++||||+ |++|.+++....+.       +++..        ..
T Consensus        54 ---E~~~l~~l----~~h~~--i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-------~~~~~--------~~  108 (330)
T 2izr_A           54 ---EYRFYKQL----GSGDG--IPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRT-------FSLKT--------VL  108 (330)
T ss_dssp             ---HHHHHHHH----CSCTT--SCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTC-------CCHHH--------HH
T ss_pred             ---HHHHHHHh----hCCCC--CCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCC-------CCHHH--------HH
Confidence               33222222    12222  3333332  245669999999 99999998753210       11111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc-----EEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ-----IGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~-----l~l~DFGl~~~l~  363 (433)
                      .+..+++.+|.+||+.|++|+|+||+||+++.++.     ++|+|||++..+.
T Consensus       109 ~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~  161 (330)
T 2izr_A          109 MIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI  161 (330)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence            35667889999999999999999999999998887     9999999998653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.74  E-value=3.7e-18  Score=165.92  Aligned_cols=152  Identities=20%  Similarity=0.193  Sum_probs=89.3

Q ss_pred             cCCccccccccceeEEEEec-CC---CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          160 ISEEPVAAASFGQVYRGSTL-DG---SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-~G---~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ...+.||+|++|.||+|+.. ++   ..||||+.++.....-  +...                                
T Consensus        26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~--------------------------------   71 (323)
T 3qup_A           26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS--DIEE--------------------------------   71 (323)
T ss_dssp             EEEEEEEEETTEEEEEEEC-------CEEEEEEC------CH--HHHH--------------------------------
T ss_pred             EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHH--HHHH--------------------------------
Confidence            34568999999999999964 33   3899999875432210  1100                                


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCc------eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhh
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRK------RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKL  307 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~------~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~  307 (433)
                        +..|...+.+    +. ++  .+++++..+  ...      .+++|||++|++|.+++........  ...+++..  
T Consensus        72 --~~~E~~~l~~----l~-h~--~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~--~~~~~~~~--  138 (323)
T 3qup_A           72 --FLREAACMKE----FD-HP--HVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN--PFNLPLQT--  138 (323)
T ss_dssp             --HHHHHHHHTT----CC-CT--TBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC-----CCCCCHHH--
T ss_pred             --HHHHHHHHHH----CC-CC--ceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhcccc--ccccCHHH--
Confidence              1223322222    21 12  233333221  111      2899999999999998865321100  00011111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                            ...+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       139 ------~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~  189 (323)
T 3qup_A          139 ------LVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS  189 (323)
T ss_dssp             ------HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             ------HHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccc
Confidence                  123556788899999999999999999999999999999999999987654

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.74  E-value=2e-19  Score=176.28  Aligned_cols=147  Identities=16%  Similarity=0.148  Sum_probs=100.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||+|+.......... +...                                  
T Consensus        43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~-~~~~----------------------------------   87 (335)
T 2owb_A           43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREK----------------------------------   87 (335)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHH-HHHH----------------------------------
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHH-HHHH----------------------------------
Confidence            44567899999999999996 47899999987643211100 0000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+.+ +  ++++++..  .....++||||++|++|.+++......+        +.+        ..
T Consensus        88 ~~~E~~~l~----~l~h-~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~--------~~~--------~~  144 (335)
T 2owb_A           88 MSMEISIHR----SLAH-Q--HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT--------EPE--------AR  144 (335)
T ss_dssp             HHHHHHHHH----TCCC-T--TBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCC--------HHH--------HH
T ss_pred             HHHHHHHHH----hCCC-C--CCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCC--------HHH--------HH
Confidence            112222221    2222 2  23333332  2356799999999999999876543322        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       145 ~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          145 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  192 (335)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence            355678889999999999999999999999999999999999987653

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.74  E-value=3.2e-19  Score=175.62  Aligned_cols=154  Identities=16%  Similarity=0.198  Sum_probs=96.9

Q ss_pred             ccCCccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          159 FISEEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      |...+.||+|+||.||+|+..    ++..||||+...... ....+..+++.+       .                   
T Consensus        39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~e~~~~~~~-------~-------------------   91 (345)
T 2v62_A           39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENG-PLFSELKFYQRV-------A-------------------   91 (345)
T ss_dssp             EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-C-HHHHHHHHHHHH-------C-------------------
T ss_pred             EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCc-chHHHHHHHHHH-------h-------------------
Confidence            334568999999999999964    678999999876532 223333333311       0                   


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeeccc------CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYL------SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLD  308 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~  308 (433)
                      .-++..|...+    ..+   .+..+++++..+      ....++||||+ |++|.+++......+        +..   
T Consensus        92 ~~~~~~e~~~~----~~l---~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~--------~~~---  152 (345)
T 2v62_A           92 KKDCIKKWIER----KQL---DYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFK--------KST---  152 (345)
T ss_dssp             CHHHHHHHHHH----HTC---SCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCC--------HHH---
T ss_pred             hhHHHHHHHhh----ccc---cccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCC--------HHH---
Confidence            00111122211    112   233455555432      34579999999 999999886543222        111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC--cEEEEecccccccC
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG--QIGFLDFGLLCRME  363 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g--~l~l~DFGl~~~l~  363 (433)
                           ...+..+++.+|.+||+.|++|+|+||+||+++.++  .++|+|||+++.+.
T Consensus       153 -----~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~  204 (345)
T 2v62_A          153 -----VLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYC  204 (345)
T ss_dssp             -----HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESS
T ss_pred             -----HHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecc
Confidence                 123566788899999999999999999999999887  99999999997664

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.74  E-value=5.8e-18  Score=166.45  Aligned_cols=147  Identities=16%  Similarity=0.224  Sum_probs=98.4

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|+||.||+|...+|+.||||+.+......  .....                                  +.
T Consensus        12 ~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~----------------------------------~~   55 (343)
T 3dbq_A           12 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN--QTLDS----------------------------------YR   55 (343)
T ss_dssp             EEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCH--HHHHH----------------------------------HH
T ss_pred             EEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccch--HHHHH----------------------------------HH
Confidence            3456899999999999998889999999876532211  01111                                  12


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++..   +.+  .+++++..  .....++||| +.|++|.+++......+        +..        ...+
T Consensus        56 ~E~~~l~~l~~---~~~--~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~--------~~~--------~~~i  113 (343)
T 3dbq_A           56 NEIAYLNKLQQ---HSD--KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWE--------RKSY  113 (343)
T ss_dssp             HHHHHHHHHTT---TCT--TBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHSCCCC--------HHH--------HHHH
T ss_pred             HHHHHHHhhhh---cCC--ceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhcCCCC--------HHH--------HHHH
Confidence            23333333321   112  23334432  3356699999 56789999887644332        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..+++.+|.+||+.|++|+|+||+||+++ +|.++|+|||++..+...
T Consensus       114 ~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A          114 WKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  160 (343)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred             HHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence            56788899999999999999999999996 789999999999877543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.74  E-value=5.5e-19  Score=168.75  Aligned_cols=146  Identities=18%  Similarity=0.167  Sum_probs=98.5

Q ss_pred             cCCccccccccceeEEEEec-CC-------CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          160 ISEEPVAAASFGQVYRGSTL-DG-------SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-~G-------~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      ...+.||+|+||.||+|+.. +|       ..||+|+.+.......    ..                            
T Consensus        11 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~----~~----------------------------   58 (289)
T 4fvq_A           11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS----ES----------------------------   58 (289)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGH----HH----------------------------
T ss_pred             eeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHH----HH----------------------------
Confidence            34568999999999999853 44       5799999864322110    00                            


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                            +..|...+.+    +. ++  .+++++..  .....++||||++|++|.+++......       .++..    
T Consensus        59 ------~~~E~~~l~~----l~-h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~----  114 (289)
T 4fvq_A           59 ------FFEAASMMSK----LS-HK--HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC-------INILW----  114 (289)
T ss_dssp             ------HHHHHHHHHT----SC-CT--TBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGG-------CCHHH----
T ss_pred             ------HHHHHHHHHh----CC-CC--CEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCC-------CCHHH----
Confidence                  1122222222    22 22  23333432  235679999999999999998753210       11111    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc--------EEEEecccccccCHH
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ--------IGFLDFGLLCRMERK  365 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~--------l~l~DFGl~~~l~~~  365 (433)
                          ...+..++..+|.+||+.|++|+|+||+||+++.++.        ++|+|||++......
T Consensus       115 ----~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~  174 (289)
T 4fvq_A          115 ----KLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK  174 (289)
T ss_dssp             ----HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH
T ss_pred             ----HHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc
Confidence                1235667888999999999999999999999998887        999999999776543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.74  E-value=5.2e-18  Score=165.66  Aligned_cols=141  Identities=24%  Similarity=0.240  Sum_probs=95.7

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +...+.||+|+||.||+|+. +|+.||||+.+.........+.                                     
T Consensus        15 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~-------------------------------------   56 (336)
T 3g2f_A           15 LKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEK-------------------------------------   56 (336)
T ss_dssp             EEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHH-------------------------------------
T ss_pred             hheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHH-------------------------------------
Confidence            34467899999999999986 7899999998643322111110                                     


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeec-------ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFR-------YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~-------~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                           .   +. ......+..+.+++.       .-....++||||++|++|.+++..... +        ...      
T Consensus        57 -----~---~~-~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-~--------~~~------  112 (336)
T 3g2f_A           57 -----N---IY-RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-D--------WVS------  112 (336)
T ss_dssp             -----H---HH-TSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCB-C--------HHH------
T ss_pred             -----H---HH-HHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhccc-c--------hhH------
Confidence                 0   00 011111222333331       111245899999999999999864321 1        111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHC---------CccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLET---------GILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~---------givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                       . ..+..++..+|.+||+.         |++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       113 -~-~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~  171 (336)
T 3g2f_A          113 -S-CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT  171 (336)
T ss_dssp             -H-HHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             -H-HHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecc
Confidence             1 12566788899999999         99999999999999999999999999997653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.74  E-value=5.9e-18  Score=161.17  Aligned_cols=147  Identities=19%  Similarity=0.173  Sum_probs=98.9

Q ss_pred             ccCCccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          159 FISEEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      +...+.||+|++|+||+|+..    ++..||||+.++......   ...                               
T Consensus        14 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~-------------------------------   59 (281)
T 3cc6_A           14 VVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN---KEK-------------------------------   59 (281)
T ss_dssp             EEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHH---HHH-------------------------------
T ss_pred             eEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchH---HHH-------------------------------
Confidence            344678999999999999853    234699999886532211   001                               


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                         +..|...+.++    . +++  +++++..+ ....++||||++|++|.+++......       +++..        
T Consensus        60 ---~~~E~~~l~~l----~-h~~--i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~-------~~~~~--------  114 (281)
T 3cc6_A           60 ---FMSEAVIMKNL----D-HPH--IVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNS-------LKVLT--------  114 (281)
T ss_dssp             ---HHHHHHHHHHH----C-CTT--BCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTT-------CCHHH--------
T ss_pred             ---HHHHHHHHHhC----C-CCC--cceEEEEEcCCCCEEEEecCCCCCHHHHHHhcccc-------CCHHH--------
Confidence               12233333333    1 222  23333222 34568999999999999998653210       11111        


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ...+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++.....
T Consensus       115 ~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A          115 LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED  165 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence            123556788899999999999999999999999999999999999987654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.74  E-value=1.1e-17  Score=158.95  Aligned_cols=182  Identities=19%  Similarity=0.191  Sum_probs=112.8

Q ss_pred             cCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|+||+|+.. +|+.||||+.+........ ....                                   
T Consensus        14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~-----------------------------------   57 (289)
T 1x8b_A           14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNA-----------------------------------   57 (289)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHH-HHHH-----------------------------------
T ss_pred             hhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHH-HHHH-----------------------------------
Confidence            34578999999999999964 8999999998754332111 0001                                   


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.+    +..+++  +++++..  .....++||||++|++|.+++.......    ..+++.        ....
T Consensus        58 ~~e~~~~~~----l~~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~--------~~~~  119 (289)
T 1x8b_A           58 LREVYAHAV----LGQHSH--VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM----SYFKEA--------ELKD  119 (289)
T ss_dssp             HHHHHHHHH----SCSCTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHT----CCCCHH--------HHHH
T ss_pred             HHHHHHHHH----hCCCCC--eeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccc----cCCCHH--------HHHH
Confidence            112222211    212332  3333332  3467799999999999999986531100    001111        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccC-------------------CcEEEEecccccccCHHHH---------H
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSS-------------------GQIGFLDFGLLCRMERKHQ---------F  368 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~-------------------g~l~l~DFGl~~~l~~~~~---------~  368 (433)
                      +..+++.+|.+||+.|++|+|+||.||+++.+                   +.++|+|||.+........         +
T Consensus       120 i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aP  199 (289)
T 1x8b_A          120 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLAN  199 (289)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCCCCCGGGCCH
T ss_pred             HHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccccCCCccccCh
Confidence            56778899999999999999999999999854                   4799999999876532110         0


Q ss_pred             HHHH-HHHHHHhcCHHHHHHHHHhcCCC
Q 013944          369 AMLA-SIVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       369 ~~~~-~~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                      .... ........|.|+++..++++-..
T Consensus       200 E~~~~~~~~~~~~Di~slG~il~~l~~~  227 (289)
T 1x8b_A          200 EVLQENYTHLPKADIFALALTVVCAAGA  227 (289)
T ss_dssp             HHHTTCCTTHHHHHHHHHHHHHHHHTTC
T ss_pred             hHhcCCCCCCchhhHHHHHHHHHHHhcC
Confidence            1110 00112356888888888877543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.73  E-value=5.1e-19  Score=183.00  Aligned_cols=171  Identities=18%  Similarity=0.182  Sum_probs=113.0

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+.+ +|+.||||+.+.+....     .                                  +|..
T Consensus       225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~-----~----------------------------------~~~~  265 (495)
T 1opk_A          225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----E----------------------------------EFLK  265 (495)
T ss_dssp             EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCH-----H----------------------------------HHHH
T ss_pred             eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccch-----H----------------------------------HHHH
Confidence            468999999999999975 58999999987643210     0                                  0122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |+..+.++    . ++  ++.+++..+  ....+|||||++|++|.+++.......      .+..        ....+.
T Consensus       266 E~~~l~~l----~-hp--niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~------~~~~--------~~~~i~  324 (495)
T 1opk_A          266 EAAVMKEI----K-HP--NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VSAV--------VLLYMA  324 (495)
T ss_dssp             HHHHHHHC----C-CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTT------SCHH--------HHHHHH
T ss_pred             HHHHHHhc----C-CC--CEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCC------CCHH--------HHHHHH
Confidence            33333332    1 22  233333322  356799999999999999987532211      1111        112356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH--------------HHHHHHHHHHHHhcCHHH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH--------------QFAMLASIVHIVNGDWQS  384 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~--------------~~~~~~~~~~~~~~d~~~  384 (433)
                      .+++.+|.+||+.|++|+|+||.||+++.++.++|+|||+++.+....              ....+..-......|.|+
T Consensus       325 ~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwS  404 (495)
T 1opk_A          325 TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA  404 (495)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHH
T ss_pred             HHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHh
Confidence            678899999999999999999999999999999999999987653211              011111101123458888


Q ss_pred             HHHHHHhc
Q 013944          385 LVHSLTEM  392 (433)
Q Consensus       385 ~~~~l~~~  392 (433)
                      ++..+++|
T Consensus       405 lG~~l~el  412 (495)
T 1opk_A          405 FGVLLWEI  412 (495)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88888776

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.73  E-value=5.9e-19  Score=173.01  Aligned_cols=164  Identities=18%  Similarity=0.275  Sum_probs=101.1

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHH-HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVV-RDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~-~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+........ .+..                                  
T Consensus        28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~----------------------------------   73 (345)
T 3hko_A           28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVE----------------------------------   73 (345)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHH----------------------------------
T ss_pred             eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHH----------------------------------
Confidence            33467899999999999996 58899999997632111000 0000                                  


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCC------------------
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVD------------------  296 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~------------------  296 (433)
                      .+..|...+.++    . ++  .+++++..  .....++||||++|++|.+++.........                  
T Consensus        74 ~~~~E~~~l~~l----~-hp--niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (345)
T 3hko_A           74 RIKTEVRLMKKL----H-HP--NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN  146 (345)
T ss_dssp             HHHHHHHHHHHC----C-CT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHH
T ss_pred             HHHHHHHHHHhC----C-CC--CcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccc
Confidence            112233333332    2 22  23333333  235679999999999999988521100000                  


Q ss_pred             ------CCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC--cEEEEecccccccC
Q 013944          297 ------GSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG--QIGFLDFGLLCRME  363 (433)
Q Consensus       297 ------~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g--~l~l~DFGl~~~l~  363 (433)
                            ......+.............+..+++.++.+||+.|++|+|+||+||+++.++  .++|+|||++..+.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~  221 (345)
T 3hko_A          147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFY  221 (345)
T ss_dssp             HHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGG
T ss_pred             ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeecccccccc
Confidence                  00000000011112222334667888999999999999999999999998776  89999999998663

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.73  E-value=3.5e-18  Score=176.01  Aligned_cols=144  Identities=20%  Similarity=0.272  Sum_probs=100.6

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCch-hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+...... ..+..                                     
T Consensus         9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~-------------------------------------   51 (483)
T 3sv0_A            9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY-------------------------------------   51 (483)
T ss_dssp             EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHH-------------------------------------
T ss_pred             EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHH-------------------------------------
Confidence            34567899999999999995 6899999998653321 22222                                     


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                          |...+.    .+.+.+.+.....+.......+|||||+ |++|.+++......       +++..        ...
T Consensus        52 ----E~~il~----~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~-------l~~~~--------~~~  107 (483)
T 3sv0_A           52 ----ESKIYR----ILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRK-------LSLKT--------VLM  107 (483)
T ss_dssp             ----HHHHHH----HTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTC-------CCHHH--------HHH
T ss_pred             ----HHHHHH----HhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCC-------CCHHH--------HHH
Confidence                222221    2233333333344444556779999999 89999998643210       11111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEE---ccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRY---TSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv---~~~g~l~l~DFGl~~~l~  363 (433)
                      +..+++.+|.|||..||+|+|+||.|||+   +.++.++|+|||++..+.
T Consensus       108 i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A          108 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             HHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            56678899999999999999999999999   688999999999987653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.73  E-value=7.3e-18  Score=162.33  Aligned_cols=200  Identities=15%  Similarity=0.135  Sum_probs=128.2

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      +.||+|++|.||+|+. .+|+.||||+.+..  .....++.++                                     
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~e~~~~-------------------------------------   64 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELH-------------------------------------   64 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHH-------------------------------------
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEeccc--HHHHHHHHHH-------------------------------------
Confidence            6799999999999996 58999999998642  1112222111                                     


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecc---cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRY---LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~---~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                          .+   ...+.+-+.+-.++..   -....++||||++|++|.+++....+..      +++..        ...+.
T Consensus        65 ----~~---~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~~--------~~~i~  123 (299)
T 3m2w_A           65 ----WR---ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA------FTERE--------ASEIM  123 (299)
T ss_dssp             ----HH---HTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCC------CBHHH--------HHHHH
T ss_pred             ----HH---hccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCC------CCHHH--------HHHHH
Confidence                11   1111111222222221   1345689999999999999987543211      11211        12356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEcc---CCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTS---SGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~---~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                      .+++.++.+||+.|++|+|+||+||+++.   ++.++|+|||++........         ....|.|+++..+++|-..
T Consensus       124 ~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---------~~~~DiwslG~il~el~tg  194 (299)
T 3m2w_A          124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKY---------DKSCDMWSLGVIMYILLCG  194 (299)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTCGG---------GGHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccccccC---------CchhhHHHHHHHHHHHHHC
Confidence            67888999999999999999999999997   78999999999988765321         1234777887777775322


Q ss_pred             CCCC---------------------C--h---HHHHHHHHHHhhchhccCCCCCcccccccc
Q 013944          396 RPGT---------------------N--T---LRVTMDLEDALGEVEFKDGIPDVKFSRVRS  431 (433)
Q Consensus       396 ~~~~---------------------d--~---~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~  431 (433)
                      .+..                     .  .   ..+..++.+++...+..+|-.+.++.++|.
T Consensus       195 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          195 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             SCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            1110                     0  0   112345666776666667777777777664

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.73  E-value=4.4e-19  Score=182.63  Aligned_cols=146  Identities=21%  Similarity=0.227  Sum_probs=98.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+........ ..+...                                  +.
T Consensus        30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~----------------------------------~~   74 (484)
T 3nyv_A           30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKES----------------------------------LL   74 (484)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB-SSCHHH----------------------------------HH
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc-chHHHH----------------------------------HH
Confidence            467899999999999996 489999999875321100 000000                                  01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.    .+   .+-++++++..+  ....++||||++|++|.+.+......+        +..        ...+
T Consensus        75 ~E~~~l~----~l---~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~~--------~~~i  131 (484)
T 3nyv_A           75 REVQLLK----QL---DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS--------EVD--------AARI  131 (484)
T ss_dssp             HHHHHHT----TC---CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCB--------HHH--------HHHH
T ss_pred             HHHHHHH----hC---CCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCC--------HHH--------HHHH
Confidence            1222221    12   122334444332  356799999999999998886543322        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEE---ccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRY---TSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv---~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|+||+||++   +.++.++|+|||++..+..
T Consensus       132 ~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          132 IRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             HHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence            5678889999999999999999999999   4678999999999987654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.73  E-value=2.5e-18  Score=179.46  Aligned_cols=173  Identities=18%  Similarity=0.189  Sum_probs=113.7

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|+||.||+|++.++..||||+.+++....     .                                  +|..|
T Consensus       272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~-----~----------------------------------~~~~E  312 (535)
T 2h8h_A          272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-----E----------------------------------AFLQE  312 (535)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCH-----H----------------------------------HHHHH
T ss_pred             heecccCCCeEEEEEEECCCceEEEEEeCCCCCCH-----H----------------------------------HHHHH
Confidence            45799999999999998878889999988653210     0                                  01223


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ++.+.++    .+.+   +.+++..+ ....+|||||++|++|.+++....+..            +... .+ ..+..+
T Consensus       313 ~~~l~~l----~hpn---iv~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------l~~~-~~-~~i~~q  371 (535)
T 2h8h_A          313 AQVMKKL----RHEK---LVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY------------LRLP-QL-VDMAAQ  371 (535)
T ss_dssp             HHHHHHC----CCTT---BCCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTT------------CCHH-HH-HHHHHH
T ss_pred             HHHHHhC----CCCC---EeeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCC------------CCHH-HH-HHHHHH
Confidence            3333332    2222   22333222 256799999999999999986432110            1111 11 235667


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHH--------------HHHHHHHHHHhcCHHHHH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF--------------AMLASIVHIVNGDWQSLV  386 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~--------------~~~~~~~~~~~~d~~~~~  386 (433)
                      ++.+|.+||+.|++|+|+||.|||++.++.++|+|||+++.+......              ..+..-......|.|+++
T Consensus       372 i~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG  451 (535)
T 2h8h_A          372 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG  451 (535)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHH
Confidence            889999999999999999999999999999999999999877543211              000000012345778888


Q ss_pred             HHHHhcCC
Q 013944          387 HSLTEMDV  394 (433)
Q Consensus       387 ~~l~~~g~  394 (433)
                      ..+++|-.
T Consensus       452 v~l~el~t  459 (535)
T 2h8h_A          452 ILLTELTT  459 (535)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHHh
Confidence            87777643

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.73  E-value=1.2e-17  Score=165.97  Aligned_cols=159  Identities=14%  Similarity=0.149  Sum_probs=105.8

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchh--hHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRH--VVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~--~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      -..+||+|++|.||+|+..+|+.||||+.+++...  .+..+...++            .........      ...+-.
T Consensus        99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~------------~~~~~~~~~------~~rl~A  160 (397)
T 4gyi_A           99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLR------------NRSTGSWMY------LSRLAA  160 (397)
T ss_dssp             EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECT------------TSCHHHHHH------HHHHHH
T ss_pred             ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHH------------hhccccHHH------HHHHHH
Confidence            35689999999999999889999999998865321  0000000000            000000000      001112


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      ..|++|+.++...     .+.+|.++..  .+.+|||||++|.+|.++....            +     .     .-+.
T Consensus       161 ~kE~~nL~rL~~~-----gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~~------------~-----~-----~~l~  211 (397)
T 4gyi_A          161 IKEFAFMKALYEE-----GFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSVP------------D-----P-----ASLY  211 (397)
T ss_dssp             HHHHHHHHHHHHT-----TCSCCCEEEE--ETTEEEEECCSCEEGGGCCCCS------------C-----H-----HHHH
T ss_pred             HHHHHHHHHHHhc-----CCCCCeeeec--cCceEEEEecCCccHhhhcccH------------H-----H-----HHHH
Confidence            4689999998754     3567777643  4558999999999887654210            0     0     1134


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCC----------cEEEEecccccccCHHH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSG----------QIGFLDFGLLCRMERKH  366 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g----------~l~l~DFGl~~~l~~~~  366 (433)
                      .++..++.++|..|++|||+||.|||++++|          .+.++||+.+...+...
T Consensus       212 ~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp~  269 (397)
T 4gyi_A          212 ADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHPN  269 (397)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTSTT
T ss_pred             HHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCCCCC
Confidence            5677899999999999999999999998877          48999999887765433

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.73  E-value=3.1e-18  Score=164.37  Aligned_cols=154  Identities=17%  Similarity=0.186  Sum_probs=92.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+..........   .                                  +
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~---~----------------------------------~   59 (303)
T 2vwi_A           17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSM---D----------------------------------E   59 (303)
T ss_dssp             CEEEEECC---CCCEEEEEC----CEEEEECCC-----------------------------------------------
T ss_pred             hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhH---H----------------------------------H
Confidence            33457899999999999985 58999999988643211000   0                                  0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|..       .+....+-.+++++..  .....++||||++|++|.+++.............+++.        ...
T Consensus        60 ~~~e~~-------~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~--------~~~  124 (303)
T 2vwi_A           60 LLKEIQ-------AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES--------TIA  124 (303)
T ss_dssp             -------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHH--------HHH
T ss_pred             HHHHHH-------HHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHH--------HHH
Confidence            011211       1222222334444433  23667999999999999998864210000000001111        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||..|++|+|++|.||+++.+|.++|+|||++..+..
T Consensus       125 ~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  173 (303)
T 2vwi_A          125 TILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT  173 (303)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence            3566788899999999999999999999999999999999999877654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.73  E-value=1.6e-17  Score=161.55  Aligned_cols=176  Identities=18%  Similarity=0.094  Sum_probs=111.5

Q ss_pred             CCccccccccceeEEEEe-----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGST-----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|+||.||+|.+     .+|+.||||+.+.......   ...                                
T Consensus        35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~--------------------------------   79 (318)
T 3lxp_A           35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQH---RSG--------------------------------   79 (318)
T ss_dssp             EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHH---HHH--------------------------------
T ss_pred             hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHH---HHH--------------------------------
Confidence            456899999999998864     2789999999876532211   111                                


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                        +..|...+.+    +.+..-+.+-.++... ....++||||++|++|.+++.... .        ++..        .
T Consensus        80 --~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~--------~~~~--------~  136 (318)
T 3lxp_A           80 --WKQEIDILRT----LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-I--------GLAQ--------L  136 (318)
T ss_dssp             --HHHHHHHHHH----CCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSC-C--------CHHH--------H
T ss_pred             --HHHHHHHHHh----CCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCC-C--------CHHH--------H
Confidence              1223322222    2222212222222222 245689999999999999986431 1        1111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH----------------HHHHHHHHHHH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ----------------FAMLASIVHIV  378 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~----------------~~~~~~~~~~~  378 (433)
                      ..+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+.....                ...........
T Consensus       137 ~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  216 (318)
T 3lxp_A          137 LLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYY  216 (318)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEH
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCc
Confidence            23556788899999999999999999999999999999999999876543210                11111000122


Q ss_pred             hcCHHHHHHHHHhcCC
Q 013944          379 NGDWQSLVHSLTEMDV  394 (433)
Q Consensus       379 ~~d~~~~~~~l~~~g~  394 (433)
                      ..|.|+++..+++|-.
T Consensus       217 ~~Di~slG~il~~ll~  232 (318)
T 3lxp_A          217 ASDVWSFGVTLYELLT  232 (318)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            4488888888887644

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.73  E-value=8.7e-18  Score=161.51  Aligned_cols=172  Identities=16%  Similarity=0.104  Sum_probs=97.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.++.....-.   ..-+.       ....  ............-...-.
T Consensus        15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~---~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~   82 (298)
T 2zv2_A           15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQA---GFPRR-------PPPR--GTRPAPGGCIQPRGPIEQ   82 (298)
T ss_dssp             EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------------------CH
T ss_pred             eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhc---ccccc-------cccc--cccccccccccccchHHH
Confidence            44567899999999999995 57899999998754321100   00000       0000  000000000000000012


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      +..|...+.+    +.+.+-+.+-.++.. .....++||||++|++|.++.... .        +++..        ...
T Consensus        83 ~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~--------~~~~~--------~~~  141 (298)
T 2zv2_A           83 VYQEIAILKK----LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-P--------LSEDQ--------ARF  141 (298)
T ss_dssp             HHHHHHHHHT----CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS-C--------CCHHH--------HHH
T ss_pred             HHHHHHHHHh----CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC-C--------CCHHH--------HHH
Confidence            3344444333    222222222222222 134679999999999998865321 1        11111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       142 ~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  188 (298)
T 2zv2_A          142 YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK  188 (298)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECS
T ss_pred             HHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccc
Confidence            55678889999999999999999999999999999999999987653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.73  E-value=1.2e-17  Score=160.57  Aligned_cols=175  Identities=19%  Similarity=0.103  Sum_probs=110.1

Q ss_pred             CCccccccccceeEEEEe-----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGST-----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|++|.||+|++     .+|+.||||+.++.....   ....                                
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~--------------------------------   69 (302)
T 4e5w_A           25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN---HIAD--------------------------------   69 (302)
T ss_dssp             EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----C---CHHH--------------------------------
T ss_pred             hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccch---hHHH--------------------------------
Confidence            346899999999999983     478999999987543211   0000                                


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccC----CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLS----RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                        +..|...+.    .+.+ +  ++++++..+.    ...++||||++|++|.+++......       +++..      
T Consensus        70 --~~~E~~~l~----~l~h-~--~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~------  127 (302)
T 4e5w_A           70 --LKKEIEILR----NLYH-E--NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-------INLKQ------  127 (302)
T ss_dssp             --HHHHHHHHH----TCCC-T--TBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTT-------CCHHH------
T ss_pred             --HHHHHHHHH----hCCC-C--CeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhcccc-------CCHHH------
Confidence              112222222    2222 2  2333333221    4468999999999999998543211       11111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH----------------HHHHHHHH
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ----------------FAMLASIV  375 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~----------------~~~~~~~~  375 (433)
                        ...+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.....                +.....-.
T Consensus       128 --~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  205 (302)
T 4e5w_A          128 --QLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSK  205 (302)
T ss_dssp             --HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCE
T ss_pred             --HHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCC
Confidence              123556788899999999999999999999999999999999999875432110                11111101


Q ss_pred             HHHhcCHHHHHHHHHhcCC
Q 013944          376 HIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       376 ~~~~~d~~~~~~~l~~~g~  394 (433)
                      .....|.|+++..+++|-.
T Consensus       206 ~~~~~Di~slG~il~~l~~  224 (302)
T 4e5w_A          206 FYIASDVWSFGVTLHELLT  224 (302)
T ss_dssp             EEHHHHHHHHHHHHHHHHT
T ss_pred             CCcchhHHHHHHHHHHHHH
Confidence            1234588888888888744

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.73  E-value=6.2e-18  Score=164.76  Aligned_cols=172  Identities=18%  Similarity=0.119  Sum_probs=111.5

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      |...+.||+|+||.||+|+. .|+.||||+.+.........                                       
T Consensus        26 y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~---------------------------------------   65 (322)
T 3soc_A           26 LQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQN---------------------------------------   65 (322)
T ss_dssp             EEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGGHHHHHH---------------------------------------
T ss_pred             chhhheecccCceEEEEEEE-CCCEEEEEEeecCchHHHHH---------------------------------------
Confidence            33456899999999999986 58999999986432211000                                       


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      ..|..       .+....+-++.+++..+.      ...++||||++|++|.+++.... .        ++..       
T Consensus        66 ~~E~~-------~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~--------~~~~-------  122 (322)
T 3soc_A           66 EYEVY-------SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-V--------SWNE-------  122 (322)
T ss_dssp             HHHHH-------TSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC-B--------CHHH-------
T ss_pred             HHHHH-------HHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcC-C--------CHHH-------
Confidence            01111       111112223344443222      23589999999999999986421 1        1111       


Q ss_pred             HHHHHHHHHHHHHHHHHHC----------CccccCCCCCceEEccCCcEEEEecccccccCHHHH---------------
Q 013944          313 LLDLVNKGVEATLVQLLET----------GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------------  367 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~----------givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------------  367 (433)
                       ...+..+++.++.+||+.          |++|+|+||+||+++.++.++|+|||++..+.....               
T Consensus       123 -~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~a  201 (322)
T 3soc_A          123 -LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA  201 (322)
T ss_dssp             -HHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCC
T ss_pred             -HHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccC
Confidence             123566788899999999          999999999999999999999999999965432110               


Q ss_pred             HHHHHH-----HHHHHhcCHHHHHHHHHhcCC
Q 013944          368 FAMLAS-----IVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       368 ~~~~~~-----~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      +.....     -......|.|+++..+++|-.
T Consensus       202 PE~~~~~~~~~~~~~~~~DiwslG~il~el~t  233 (322)
T 3soc_A          202 PEVLEGAINFQRDAFLRIDMYAMGLVLWELAS  233 (322)
T ss_dssp             HHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HhhcccccccCcCCCccchhHHHHHHHHHHHh
Confidence            111110     112334588999988888744

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.73  E-value=3.7e-18  Score=163.32  Aligned_cols=143  Identities=19%  Similarity=0.240  Sum_probs=98.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCc-hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL-RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~-~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...+.||+|++|.||+|+. .+|+.||||+..... ...+..                                      
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~--------------------------------------   53 (296)
T 4hgt_A           12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI--------------------------------------   53 (296)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHH--------------------------------------
T ss_pred             EEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHH--------------------------------------
Confidence            3467899999999999995 689999999854321 122222                                      


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         |...+.++    .+.+.+.....+.......++||||+ |++|.+++......       +++..        ...+
T Consensus        54 ---e~~~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-------~~~~~--------~~~i  110 (296)
T 4hgt_A           54 ---ESKIYKMM----QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRK-------FSLKT--------VLLL  110 (296)
T ss_dssp             ---HHHHHHHH----TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSC-------CCHHH--------HHHH
T ss_pred             ---HHHHHHHh----cCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCC-------CCHHH--------HHHH
Confidence               22222222    22333333333334456679999999 89999988643211       11111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEE---ccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRY---TSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv---~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+++.++.+||+.|++|+|+||+||++   +.++.++|+|||++..+.
T Consensus       111 ~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A          111 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            6678889999999999999999999999   788999999999987553

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.73  E-value=4.4e-18  Score=164.27  Aligned_cols=188  Identities=19%  Similarity=0.162  Sum_probs=114.0

Q ss_pred             cCCccccccccceeEEEEe------cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          160 ISEEPVAAASFGQVYRGST------LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l------~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      ...+.||+|+||.||+|+.      .+|+.||||+.+......   +...                              
T Consensus        26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~------------------------------   72 (314)
T 2ivs_A           26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS---ELRD------------------------------   72 (314)
T ss_dssp             EEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHH---HHHH------------------------------
T ss_pred             eeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHH---HHHH------------------------------
Confidence            3457899999999999985      245899999987654321   1111                              


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCC----------Cch
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGS----------STH  301 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~----------~~~  301 (433)
                          +..|...+.+    +. ++  ++++++..  .....++||||++|++|.+++...........          ...
T Consensus        73 ----~~~E~~~l~~----l~-hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  141 (314)
T 2ivs_A           73 ----LLSEFNVLKQ----VN-HP--HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH  141 (314)
T ss_dssp             ----HHHHHHHHTT----CC-CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC-------------
T ss_pred             ----HHHHHHHHhh----CC-CC--ceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCccccccccccccccc
Confidence                1123222221    21 22  23444433  23567999999999999999876432110000          000


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH---------------
Q 013944          302 LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH---------------  366 (433)
Q Consensus       302 ~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~---------------  366 (433)
                      .....+.... + ..+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+....               
T Consensus       142 ~~~~~~~~~~-~-~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  219 (314)
T 2ivs_A          142 PDERALTMGD-L-ISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM  219 (314)
T ss_dssp             ---CEECHHH-H-HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGC
T ss_pred             ccccCcCHHH-H-HHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCccccc
Confidence            0000111111 1 2356678899999999999999999999999999999999999987543211               


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHhcC
Q 013944          367 QFAMLASIVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       367 ~~~~~~~~~~~~~~d~~~~~~~l~~~g  393 (433)
                      .+.....-......|.|+++..+++|-
T Consensus       220 aPE~~~~~~~~~~~Di~slG~il~el~  246 (314)
T 2ivs_A          220 AIESLFDHIYTTQSDVWSFGVLLWEIV  246 (314)
T ss_dssp             CHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             ChhhhcCCCcCchhhHHHHHHHHHHHH
Confidence            011111101123468888888887763

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.73  E-value=2.1e-17  Score=164.37  Aligned_cols=187  Identities=18%  Similarity=0.187  Sum_probs=98.2

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.........  +...+                                  
T Consensus        32 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~--~~~~~----------------------------------   75 (367)
T 2fst_X           32 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII--HAKRT----------------------------------   75 (367)
T ss_dssp             EEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHH--HHHHH----------------------------------
T ss_pred             EEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHH--HHHHH----------------------------------
Confidence            3456899999999999985 6899999999865432110  00000                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc-----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY-----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      ..|.+.+..    +.+.+-+.+-.++..     .....+++||++ |++|.+++... .+        ++..        
T Consensus        76 ~~E~~~l~~----l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~l--------~~~~--------  133 (367)
T 2fst_X           76 YRELRLLKH----MKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ-KL--------TDDH--------  133 (367)
T ss_dssp             HHHHHHHHH----CCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----C-CC--------CHHH--------
T ss_pred             HHHHHHHHh----CCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcC-CC--------CHHH--------
Confidence            112222221    222221222222211     124569999999 67888877531 11        1111        


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g  393 (433)
                      ...+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||+++........        .....++...+.+....
T Consensus       134 ~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--------~~~t~~y~aPE~~~~~~  205 (367)
T 2fst_X          134 VQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG--------YVATRWYRAPEIMLNWM  205 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----------------------CCCTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCC--------cCcCcCccChHHHcCCc
Confidence            1235667889999999999999999999999999999999999999876543211        11111222223333323


Q ss_pred             CCCCCCChHHHHHHHHHHh
Q 013944          394 VVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       394 ~~~~~~d~~~~~~~l~~~l  412 (433)
                      ......|+|+++-.+.+++
T Consensus       206 ~~~~~~DiwslG~il~ell  224 (367)
T 2fst_X          206 HYNQTVDIWSVGCIMAELL  224 (367)
T ss_dssp             SCCTTHHHHHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHH
Confidence            4455667776666666555

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.73  E-value=2.8e-19  Score=174.49  Aligned_cols=146  Identities=17%  Similarity=0.213  Sum_probs=95.7

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+........                                     ..
T Consensus         4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~   46 (324)
T 3mtl_A            4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP-------------------------------------CT   46 (324)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------C-------------------------------------CC
T ss_pred             eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccc-------------------------------------hh
Confidence            33456899999999999996 48999999988653221100                                     00


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+.   +-.+++++..  .....++||||++| +|.+++......       .++.        ...
T Consensus        47 ~~~E~~~l~----~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~-------~~~~--------~~~  103 (324)
T 3mtl_A           47 AIREVSLLK----DLK---HANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNI-------INMH--------NVK  103 (324)
T ss_dssp             CCCCHHHHS----CCC---CTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTC-------CCHH--------HHH
T ss_pred             HHHHHHHHH----hcC---CCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCC-------CCHH--------HHH
Confidence            111222221    121   2223444433  34567999999986 777776543211       1111        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++.....
T Consensus       104 ~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  152 (324)
T 3mtl_A          104 LFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI  152 (324)
T ss_dssp             HHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred             HHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence            3566788899999999999999999999999999999999999986653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.73  E-value=2e-18  Score=172.40  Aligned_cols=152  Identities=16%  Similarity=0.180  Sum_probs=100.5

Q ss_pred             cCCccccccccceeEEEEec--------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          160 ISEEPVAAASFGQVYRGSTL--------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~--------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      ...+.||+|+||.||+|+..        ++..||||+.+......   +...+                           
T Consensus        72 ~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~---------------------------  121 (382)
T 3tt0_A           72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---DLSDL---------------------------  121 (382)
T ss_dssp             EEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHH---HHHHH---------------------------
T ss_pred             EeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHH---HHHHH---------------------------
Confidence            34578999999999999852        34689999987654321   11111                           


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCC--------CCch
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDG--------SSTH  301 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~--------~~~~  301 (433)
                             ..|.+.+.++    .++++  +++++..  ..+..++||||++|++|.+++..........        ...+
T Consensus       122 -------~~E~~~l~~l----~~hpn--Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l  188 (382)
T 3tt0_A          122 -------ISEMEMMKMI----GKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL  188 (382)
T ss_dssp             -------HHHHHHHHHH----CCCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCC
T ss_pred             -------HHHHHHHHHh----cCCch--hhhheeeeccCCceEEEEEecCCCcHHHHHHHhccccccccccccccccccc
Confidence                   1233222222    12222  3333332  2356799999999999999997654211000        0011


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          302 LDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       302 ~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ++..        ...+..+++.+|.+||+.|++|+|+||+||+++.++.++|+|||++..+
T Consensus       189 ~~~~--------~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~  241 (382)
T 3tt0_A          189 SSKD--------LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI  241 (382)
T ss_dssp             CHHH--------HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCS
T ss_pred             CHHH--------HHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccc
Confidence            1111        1235667889999999999999999999999999999999999998754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.73  E-value=4.5e-19  Score=169.30  Aligned_cols=172  Identities=19%  Similarity=0.172  Sum_probs=111.7

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+.. +|+.||||+.+.+....     ..                                  +.
T Consensus        17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~----------------------------------~~   57 (288)
T 3kfa_A           17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EE----------------------------------FL   57 (288)
T ss_dssp             EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHH-----HH----------------------------------HH
T ss_pred             EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHH-----HH----------------------------------HH
Confidence            4568999999999999964 68999999987543221     00                                  11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    . ++  .+++++..  .....++||||++|++|.+++.......      .++.        ....+
T Consensus        58 ~E~~~l~~l----~-h~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~------~~~~--------~~~~i  116 (288)
T 3kfa_A           58 KEAAVMKEI----K-HP--NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VSAV--------VLLYM  116 (288)
T ss_dssp             HHHHHHHHC----C-CT--TBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTT------SCHH--------HHHHH
T ss_pred             HHHHHHHhC----C-CC--CEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCC------ccHh--------HHHHH
Confidence            222222222    2 22  23333332  2356699999999999999987532211      1111        11235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH--------------HHHHHHHHHHHHhcCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH--------------QFAMLASIVHIVNGDWQ  383 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~--------------~~~~~~~~~~~~~~d~~  383 (433)
                      ..++..++.+||+.|++|+|+||.||+++.++.++|+|||++.......              .+.....-......|.+
T Consensus       117 ~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  196 (288)
T 3kfa_A          117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW  196 (288)
T ss_dssp             HHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHH
Confidence            5678889999999999999999999999999999999999987543211              01111110112345788


Q ss_pred             HHHHHHHhc
Q 013944          384 SLVHSLTEM  392 (433)
Q Consensus       384 ~~~~~l~~~  392 (433)
                      +++..+++|
T Consensus       197 slG~il~~l  205 (288)
T 3kfa_A          197 AFGVLLWEI  205 (288)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            888887776

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.73  E-value=5.9e-18  Score=161.45  Aligned_cols=147  Identities=19%  Similarity=0.248  Sum_probs=99.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+..+.....  .+                                 .+-.
T Consensus        16 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~---------------------------------~~~~   60 (284)
T 2vgo_A           16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK--EG---------------------------------VEHQ   60 (284)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TT---------------------------------CHHH
T ss_pred             ceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch--HH---------------------------------HHHH
Confidence            44567899999999999996 478899999875321100  00                                 0001


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+. ++  .+++++..  .....++||||++|++|.+++......+        +..        ..
T Consensus        61 ~~~e~~~l~----~l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~  117 (284)
T 2vgo_A           61 LRREIEIQS----HLR-HP--NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD--------EQR--------SA  117 (284)
T ss_dssp             HHHHHHHHH----TCC-CT--TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCC--------HHH--------HH
T ss_pred             HHHHHHHHh----cCC-CC--CEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCC--------HHH--------HH
Confidence            122322222    222 22  23333332  3456799999999999999887543322        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..++.+||+.|++|+|++|+||+++.+|.++|+|||++....
T Consensus       118 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A          118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            355678889999999999999999999999999999999999886543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.73  E-value=6.9e-18  Score=166.61  Aligned_cols=147  Identities=20%  Similarity=0.177  Sum_probs=97.8

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+......     ...                                  .
T Consensus        39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~----------------------------------~   79 (360)
T 3llt_A           39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT-----RSA----------------------------------K   79 (360)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHH-----HHH----------------------------------H
T ss_pred             EEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhh-----hhh----------------------------------H
Confidence            356899999999999996 589999999986421110     000                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++..  ....+..+++++..  .....++||||+ |++|.+++.......      +++..        ...+
T Consensus        80 ~e~~~l~~l~~--~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~------~~~~~--------~~~i  142 (360)
T 3llt_A           80 IEADILKKIQN--DDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNG------FHIED--------IKLY  142 (360)
T ss_dssp             HHHHHHHHTCC--CSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCC------CCHHH--------HHHH
T ss_pred             HHHHHHHHhcc--cCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCC------CCHHH--------HHHH
Confidence            12222222210  11122334444432  235679999999 899999887543211      11111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEcc-------------------------CCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTS-------------------------SGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~-------------------------~g~l~l~DFGl~~~l~  363 (433)
                      ..++..+|.+||+.|++|+|+||+||+++.                         ++.++|+|||++....
T Consensus       143 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~  213 (360)
T 3llt_A          143 CIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS  213 (360)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT
T ss_pred             HHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecC
Confidence            667889999999999999999999999974                         7899999999997654

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.73  E-value=3.8e-18  Score=163.33  Aligned_cols=143  Identities=19%  Similarity=0.245  Sum_probs=97.9

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCch-hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...+.||+|++|+||+|+. .+|+.||||+...... +.+..                                      
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~--------------------------------------   53 (296)
T 3uzp_A           12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI--------------------------------------   53 (296)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHH--------------------------------------
T ss_pred             EEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHH--------------------------------------
Confidence            3457899999999999995 6899999998764322 22222                                      


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                         |...+.++    .+.+.+.....+.......++||||+ |++|.+++......       +++..        ...+
T Consensus        54 ---e~~~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-------~~~~~--------~~~i  110 (296)
T 3uzp_A           54 ---ESKIYKMM----QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRK-------FSLKT--------VLLL  110 (296)
T ss_dssp             ---HHHHHHHH----TTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTC-------CCHHH--------HHHH
T ss_pred             ---HHHHHHHh----hcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccC-------CCHHH--------HHHH
Confidence               22222222    22222222222333445669999999 89999998643211       11111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEE---ccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRY---TSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv---~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+++.++.+||+.|++|+|+||.||++   +.++.++|+|||++..+.
T Consensus       111 ~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A          111 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             HHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            6678899999999999999999999999   478999999999987643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.73  E-value=9.4e-19  Score=167.41  Aligned_cols=149  Identities=17%  Similarity=0.222  Sum_probs=96.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+........   +...                                  +
T Consensus        25 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~----------------------------------~   67 (285)
T 3is5_A           25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV---PMEQ----------------------------------I   67 (285)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS---CHHH----------------------------------H
T ss_pred             eecceeccCCCeEEEEEEEccCCceEEEEEeeccccch---hHHH----------------------------------H
Confidence            3467899999999999996 579999999876432110   0000                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|.+.+.+    +.+ +  .+++++..  .....++||||++|++|.+.+.......    ..+++.        ....
T Consensus        68 ~~E~~~l~~----l~h-p--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~--------~~~~  128 (285)
T 3is5_A           68 EAEIEVLKS----LDH-P--NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG----KALSEG--------YVAE  128 (285)
T ss_dssp             HHHHHHHHT----CCC-T--TBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHT----CCCCHH--------HHHH
T ss_pred             HHHHHHHHh----CCC-c--hHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcc----cCCCHH--------HHHH
Confidence            112222221    222 2  23344433  2356799999999999998875421000    001111        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEE---ccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRY---TSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv---~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..++..+|.+||+.|++|+|+||+||++   +.++.++|+|||++..+..
T Consensus       129 i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~  179 (285)
T 3is5_A          129 LMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS  179 (285)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred             HHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence            56678889999999999999999999999   4568899999999987654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.73  E-value=4.6e-18  Score=161.47  Aligned_cols=143  Identities=16%  Similarity=0.205  Sum_probs=98.8

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|+||+|+. .+++.||+|+..+.....    ...                                  +
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~----~~~----------------------------------~   53 (277)
T 3f3z_A           12 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED----VDR----------------------------------F   53 (277)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC----HHH----------------------------------H
T ss_pred             EeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch----HHH----------------------------------H
Confidence            3456899999999999996 468899999876432221    000                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.+    +. ++  .+++++..  .....++||||++|++|.+++......+        +..        ...
T Consensus        54 ~~E~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~~--------~~~  110 (277)
T 3f3z_A           54 KQEIEIMKS----LD-HP--NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR--------ESD--------AAR  110 (277)
T ss_dssp             HHHHHHHHT----CC-CT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCC--------HHH--------HHH
T ss_pred             HHHHHHHHh----CC-CC--CEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCC--------HHH--------HHH
Confidence            122222222    22 22  23444433  3356799999999999998886543322        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEE---ccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRY---TSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv---~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.+||+.|++|+|+||+||++   +.++.++|+|||++..+.
T Consensus       111 i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A          111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence            56678889999999999999999999999   778999999999987654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.73  E-value=2.7e-18  Score=163.90  Aligned_cols=149  Identities=17%  Similarity=0.197  Sum_probs=89.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+.+........  ...+.                                  
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~~----------------------------------   54 (290)
T 3fme_A           11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ--KRLLM----------------------------------   54 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHH--HHHHH----------------------------------
T ss_pred             hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHH--HHHHH----------------------------------
Confidence            456899999999999996 58999999998754322111  00000                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                       |..   ..   .....+-.+++++..  ..+..++||||++| +|.+++.......    ..+++.        ....+
T Consensus        55 -~~~---~~---~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~----~~~~~~--------~~~~i  114 (290)
T 3fme_A           55 -DLD---IS---MRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKG----QTIPED--------ILGKI  114 (290)
T ss_dssp             -HHH---HH---HTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTT----CCCCHH--------HHHHH
T ss_pred             -HHH---HH---HHhCCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcC----CCCCHH--------HHHHH
Confidence             100   01   111122233444432  34567999999986 7777664311000    001111        11235


Q ss_pred             HHHHHHHHHHHHHC-CccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~-givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..++.+||+. |++|+|+||+||+++.++.++|+|||++..+...
T Consensus       115 ~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T 3fme_A          115 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD  163 (290)
T ss_dssp             HHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred             HHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence            66788899999998 9999999999999999999999999998776543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.73  E-value=2.2e-17  Score=159.07  Aligned_cols=174  Identities=16%  Similarity=0.143  Sum_probs=110.3

Q ss_pred             HhcCCCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHH
Q 013944          129 LHDQIPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGL  208 (433)
Q Consensus       129 lqd~~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~  208 (433)
                      -+...+.+++.+..++.     ........+...+.||+|++|.||+|+. +|+.||||+........-......     
T Consensus         8 ~~~~~~~~~~~~l~~~~-----~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~-----   76 (307)
T 2nru_A            8 SDTRFHSFSFYELKNVT-----NNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQ-----   76 (307)
T ss_dssp             ---CCEECCHHHHHHHT-----TTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHH-----
T ss_pred             CCCCCCcccHHHHHHHH-----cccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHH-----
Confidence            34456677777765443     2222222344567999999999999986 789999998875432100000000     


Q ss_pred             HHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchh
Q 013944          209 GLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDL  286 (433)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~  286 (433)
                                                   +..|...+.+    +. ++  .+++++..  .....++||||++|++|.++
T Consensus        77 -----------------------------~~~E~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  120 (307)
T 2nru_A           77 -----------------------------FDQEIKVMAK----CQ-HE--NLVELLGFSSDGDDLCLVYVYMPNGSLLDR  120 (307)
T ss_dssp             -----------------------------HHHHHHHHHH----CC-CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             -----------------------------HHHHHHHHHh----cC-CC--CeEEEEEEEecCCceEEEEEecCCCcHHHH
Confidence                                         1123222222    22 22  23344433  23567999999999999998


Q ss_pred             hhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          287 ISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       287 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +.......     ..+...        ...+..+++.+|.+||..|++|+|+||+||+++.++.++|+|||++...
T Consensus       121 l~~~~~~~-----~~~~~~--------~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  183 (307)
T 2nru_A          121 LSCLDGTP-----PLSWHM--------RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS  183 (307)
T ss_dssp             HHTGGGCC-----CCCHHH--------HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHhccCCC-----CCCHHH--------HHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccc
Confidence            86432110     011111        1235667888999999999999999999999999999999999987654

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.73  E-value=1.8e-17  Score=157.18  Aligned_cols=148  Identities=20%  Similarity=0.258  Sum_probs=101.8

Q ss_pred             ccCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+.. +|+.||||+.++.....  .+                   ..              -.
T Consensus        13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~-------------------~~--------------~~   57 (276)
T 2h6d_A           13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS--LD-------------------VV--------------GK   57 (276)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT-------------------CH--------------HH
T ss_pred             EEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccc--hh-------------------HH--------------HH
Confidence            344678999999999999964 89999999976321100  00                   00              00


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+..    +. ++  .+++++..  ..+..++||||++|++|.+++......+        +..        ..
T Consensus        58 ~~~e~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~  114 (276)
T 2h6d_A           58 IKREIQNLKL----FR-HP--HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE--------EME--------AR  114 (276)
T ss_dssp             HHHHHHHHHT----CC-CT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCC--------HHH--------HH
T ss_pred             HHHHHHHHhc----CC-CC--CEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCC--------HHH--------HH
Confidence            1223333222    22 22  23344332  3466799999999999999987543222        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++.....
T Consensus       115 ~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A          115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             HHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            3556788899999999999999999999999999999999999987754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.73  E-value=1.9e-17  Score=158.91  Aligned_cols=160  Identities=14%  Similarity=0.106  Sum_probs=109.2

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.++.....-. ...                                  .
T Consensus        33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~-~~~----------------------------------~   77 (286)
T 3uqc_A           33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDD-VLQ----------------------------------E   77 (286)
T ss_dssp             EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHH-HHH----------------------------------H
T ss_pred             EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHH-HHH----------------------------------H
Confidence            34457899999999999996 46999999999875432100 000                                  0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+. ++  ++++++..  ..+..++||||++|++|.+++...  ..        +.       ....
T Consensus        78 ~~~e~~~l~----~l~-hp--~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~--------~~-------~~~~  133 (286)
T 3uqc_A           78 TLSRTLRLS----RID-KP--GVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS--PS--------PV-------GAIR  133 (286)
T ss_dssp             HHHHHHHHH----TCC-CT--TBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC--CC--------HH-------HHHH
T ss_pred             HHHHHHHHh----cCC-CC--CcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC--CC--------hH-------HHHH
Confidence            122333322    222 22  23444433  345679999999999999998531  11        11       1122


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~  392 (433)
                       +..++..+|.+||+.|++|+|+||+||+++.+|.++|+++|.+...+..              .|.|+++..+++|
T Consensus       134 -i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~--------------~Di~slG~il~el  195 (286)
T 3uqc_A          134 -AMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQ--------------DDIRGIGASLYAL  195 (286)
T ss_dssp             -HHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTTCCHH--------------HHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCCCCch--------------hHHHHHHHHHHHH
Confidence             4567889999999999999999999999999999999998887654432              3677777777664

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=2.4e-18  Score=168.71  Aligned_cols=188  Identities=17%  Similarity=0.081  Sum_probs=112.1

Q ss_pred             CCccccccccceeEEEEe------cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGST------LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l------~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|+||.||+|+.      .+++.||||+.+......   +...                               
T Consensus        49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~-------------------------------   94 (344)
T 1rjb_A           49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS---EREA-------------------------------   94 (344)
T ss_dssp             EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHH-------------------------------
T ss_pred             eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHH---HHHH-------------------------------
Confidence            356899999999999985      246789999987542211   0001                               


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCC-CCCCCC-----chh---h
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGS-SVDGSS-----THL---D  303 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~-~~~~~~-----~~~---~  303 (433)
                         +..|...+.++    .++++  +++++..  .....++||||++|++|.+++...... +.....     ...   .
T Consensus        95 ---~~~E~~~l~~l----~~hp~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  165 (344)
T 1rjb_A           95 ---LMSELKMMTQL----GSHEN--IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED  165 (344)
T ss_dssp             ---HHHHHHHHHHH----CCCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC------------------
T ss_pred             ---HHHHHHHHHhh----cCCCC--eeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccc
Confidence               12233333332    12232  3333332  346679999999999999998754321 000000     000   0


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH---------------H
Q 013944          304 RQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------------F  368 (433)
Q Consensus       304 ~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------------~  368 (433)
                      ...+...  ....+..+++.+|.+||..|++|+|+||+||+++.++.++|+|||++..+.....               +
T Consensus       166 ~~~l~~~--~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP  243 (344)
T 1rjb_A          166 LNVLTFE--DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP  243 (344)
T ss_dssp             ---CCHH--HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred             cccCCHH--HHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCH
Confidence            0001111  1123566788999999999999999999999999999999999999875432110               1


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHhcC
Q 013944          369 AMLASIVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       369 ~~~~~~~~~~~~d~~~~~~~l~~~g  393 (433)
                      .....-......|.|+++..+++|-
T Consensus       244 E~~~~~~~~~~~Di~slG~il~el~  268 (344)
T 1rjb_A          244 ESLFEGIYTIKSDVWSYGILLWEIF  268 (344)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred             HHhccCCCChhHhHHHHHHHHHHHH
Confidence            1111101123458888888888764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.73  E-value=1.9e-17  Score=161.04  Aligned_cols=198  Identities=18%  Similarity=0.187  Sum_probs=119.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhh-HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHV-VVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~-~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+...... ...+                               .....
T Consensus        12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~-------------------------------~~~~~   60 (322)
T 2ycf_A           12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSARE-------------------------------ADPAL   60 (322)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC----------------------------------------------
T ss_pred             eeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhccccc-------------------------------chhhh
Confidence            34467899999999999996 578999999987532110 0000                               00011


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      ++..|...+.++    .+ ++  +++++..+ ....++||||++|++|.+++......+        +..        ..
T Consensus        61 ~~~~E~~~l~~l----~h-~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~~--------~~  117 (322)
T 2ycf_A           61 NVETEIEILKKL----NH-PC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLK--------EAT--------CK  117 (322)
T ss_dssp             CHHHHHHHHHHC----CC-TT--BCCEEEEEESSSEEEEEECCTTEETHHHHSTTCCCC--------HHH--------HH
T ss_pred             hHHHHHHHHHhC----CC-CC--CceEeeEEcCCceEEEEecCCCCcHHHHHhccCCCC--------HHH--------HH
Confidence            223344433332    22 22  23333222 245799999999999998876433222        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc---EEEEecccccccCHHHHHHHHHHHHHHHhcCH-HHHHHHHHh
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ---IGFLDFGLLCRMERKHQFAMLASIVHIVNGDW-QSLVHSLTE  391 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~---l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~-~~~~~~l~~  391 (433)
                      .+..+++.+|.+||+.|++|+|+||.||+++.++.   ++|+|||++..+.......   .    ..+.. +...+.+..
T Consensus       118 ~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~---~----~~gt~~y~aPE~~~~  190 (322)
T 2ycf_A          118 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---T----LCGTPTYLAPEVLVS  190 (322)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHH---H----HHSCCTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccc---c----ccCCcCccCchhhcc
Confidence            35567888999999999999999999999987664   9999999998876532211   1    11121 222222222


Q ss_pred             --cCCCCCCCChHHHHHHHHHHh-hchhc
Q 013944          392 --MDVVRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       392 --~g~~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                        -+......|+++++..+.+++ +...|
T Consensus       191 ~~~~~~~~~~Di~slG~il~~l~~g~~pf  219 (322)
T 2ycf_A          191 VGTAGYNRAVDCWSLGVILFICLSGYPPF  219 (322)
T ss_dssp             TTTTTCTTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence              233455678888777776665 44444

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.72  E-value=9.8e-20  Score=178.84  Aligned_cols=153  Identities=19%  Similarity=0.149  Sum_probs=99.9

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+......-..                ...              ...-.
T Consensus        26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~----------------~~~--------------~~~~~   75 (335)
T 3dls_A           26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCW----------------IED--------------PKLGK   75 (335)
T ss_dssp             EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSE----------------EEE--------------TTTEE
T ss_pred             eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccc----------------cch--------------HHHHH
Confidence            34457899999999999995 589999999876542110000                000              00001


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCC-CcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGE-SPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      +..|...+.+    +. ++  .+++++..  .....++||||+.++ +|.+++......+        +..        .
T Consensus        76 ~~~E~~~l~~----l~-h~--~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~--------~~~--------~  132 (335)
T 3dls_A           76 VTLEIAILSR----VE-HA--NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLD--------EPL--------A  132 (335)
T ss_dssp             EEHHHHHHTT----CC-CT--TBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCC--------HHH--------H
T ss_pred             HHHHHHHHHh----CC-CC--CEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCC--------HHH--------H
Confidence            1223322222    21 22  23444432  345678999998766 8888886543322        111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+..++..+|.+||..|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       133 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  182 (335)
T 3dls_A          133 SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER  182 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence            23566788899999999999999999999999999999999999976643

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=9.6e-18  Score=167.21  Aligned_cols=145  Identities=20%  Similarity=0.190  Sum_probs=90.5

Q ss_pred             CCccccccccceeEEEEec--CC--CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          161 SEEPVAAASFGQVYRGSTL--DG--SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~--~G--~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ..+.||+|+||+||+|+..  ++  ..||||+.+.......   ..                                  
T Consensus        93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~---~~----------------------------------  135 (373)
T 3c1x_A           93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE---VS----------------------------------  135 (373)
T ss_dssp             EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHH---HH----------------------------------
T ss_pred             cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHH---HH----------------------------------
Confidence            3468999999999999863  32  4689998865322110   00                                  


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeec---ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFR---YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~---~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      ++..|+..+       ....+-.+.+++.   ...+..++||||++|++|.+++......       .+...       +
T Consensus       136 ~~~~E~~il-------~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------~~~~~-------~  194 (373)
T 3c1x_A          136 QFLTEGIIM-------KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-------PTVKD-------L  194 (373)
T ss_dssp             HHHHHHTTS-------TTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCC-------CBHHH-------H
T ss_pred             HHHHHHHHH-------HhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccC-------CCHHH-------H
Confidence            011222211       1111222333332   2235669999999999999998643211       11111       1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                       ..+..+++.++.+||+.|++|+|+||+||+++.++.++|+|||+++.+..
T Consensus       195 -~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          195 -IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             -HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             -HHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccc
Confidence             22456788899999999999999999999999999999999999987644

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.72  E-value=1.1e-17  Score=163.57  Aligned_cols=147  Identities=18%  Similarity=0.207  Sum_probs=97.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+...........+  .                                  
T Consensus        27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~--~----------------------------------   70 (331)
T 4aaa_A           27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKK--I----------------------------------   70 (331)
T ss_dssp             EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHH--H----------------------------------
T ss_pred             heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHH--H----------------------------------
Confidence            34456899999999999996 4699999998754432211100  0                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.+    +.+ +  .+++++..  .....++||||++|+.|.++.....+.+        +..        ..
T Consensus        71 ~~~E~~~l~~----l~h-~--~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~--------~~~--------~~  127 (331)
T 4aaa_A           71 AMREIKLLKQ----LRH-E--NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLD--------YQV--------VQ  127 (331)
T ss_dssp             HHHHHHHHHH----CCC-T--TBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCC--------HHH--------HH
T ss_pred             HHHHHHHHhh----CCC-C--CEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCC--------HHH--------HH
Confidence            0122222222    222 2  23333332  2356799999999999888765433322        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       128 ~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A          128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  176 (331)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             HHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence            3556788899999999999999999999999999999999999987654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.72  E-value=9.6e-18  Score=163.07  Aligned_cols=143  Identities=22%  Similarity=0.367  Sum_probs=97.3

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR--HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~--~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+......  ..+..                                      
T Consensus        28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~--------------------------------------   69 (326)
T 2x7f_A           28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ--------------------------------------   69 (326)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHH--------------------------------------
T ss_pred             EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHH--------------------------------------
Confidence            456899999999999996 5899999999764322  11111                                      


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--------CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--------SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--------~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                         |...+.++    .++++  +++++..+        ....++||||++|++|.+++....+..      +++.     
T Consensus        70 ---e~~~l~~l----~~h~~--i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~-----  129 (326)
T 2x7f_A           70 ---EINMLKKY----SHHRN--IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT------LKEE-----  129 (326)
T ss_dssp             ---HHHHHHHH----CCSTT--BCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGC------CCHH-----
T ss_pred             ---HHHHHHhc----cCCCC--eeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCC------CCHH-----
Confidence               22222222    11222  23333222        356799999999999999987532111      1111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                         ....+..+++.++.+||..|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       130 ---~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  181 (326)
T 2x7f_A          130 ---WIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR  181 (326)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred             ---HHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence               1123566788999999999999999999999999999999999999887654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.72  E-value=1.4e-18  Score=166.65  Aligned_cols=145  Identities=17%  Similarity=0.165  Sum_probs=94.2

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|.||+|+. .+|+.||||+.+......-.  ...                                  +
T Consensus         5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~~----------------------------------~   48 (292)
T 3o0g_A            5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGV--PSS----------------------------------A   48 (292)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTH--HHH----------------------------------H
T ss_pred             eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCc--chH----------------------------------H
Confidence            3456899999999999996 57999999988643321100  000                                  0


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .+|...+.    .+.+ +  .+.+++..  .....++||||++|..+..+.......+        +.        ....
T Consensus        49 ~~E~~~l~----~l~h-~--~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~--------~~--------~~~~  105 (292)
T 3o0g_A           49 LREICLLK----ELKH-K--NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD--------PE--------IVKS  105 (292)
T ss_dssp             HHHHHHHT----TCCC-T--TBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCC--------HH--------HHHH
T ss_pred             HHHHHHHh----cCCC-C--CEeeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCC--------HH--------HHHH
Confidence            11222221    1222 2  23333332  2456799999999744433332222221        11        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       106 ~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~  152 (292)
T 3o0g_A          106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence            56678889999999999999999999999999999999999987653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.72  E-value=8.2e-18  Score=165.01  Aligned_cols=144  Identities=19%  Similarity=0.250  Sum_probs=94.5

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+.+ +|+.||||+.+.....  ..                                         
T Consensus        34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~-----------------------------------------   70 (336)
T 3fhr_A           34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA--RQ-----------------------------------------   70 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH--HH-----------------------------------------
T ss_pred             ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH--HH-----------------------------------------
Confidence            457999999999999964 8999999998653211  00                                         


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc---CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL---SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      |..   .......+...+.+-.++...   ....++||||++|++|.+++....+..      +++..        ...+
T Consensus        71 e~~---~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~------l~~~~--------~~~i  133 (336)
T 3fhr_A           71 EVD---HHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQA------FTERE--------AAEI  133 (336)
T ss_dssp             HHH---HHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCC------CBHHH--------HHHH
T ss_pred             HHH---HHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCC------CCHHH--------HHHH
Confidence            000   111112222222333333221   123689999999999999987543211      11221        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccC---CcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~---g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..+|.+||..|++|+|+||+||+++.+   +.++|+|||++......
T Consensus       134 ~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~  184 (336)
T 3fhr_A          134 MRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN  184 (336)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc
Confidence            6678889999999999999999999999864   55999999999876543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.72  E-value=2.7e-18  Score=163.20  Aligned_cols=145  Identities=17%  Similarity=0.242  Sum_probs=98.7

Q ss_pred             ccCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|+||+|+.. +|+.||||+.+.... .+..++.+++                                
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~l~--------------------------------   59 (284)
T 2a19_B           13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-KAEREVKALA--------------------------------   59 (284)
T ss_dssp             EEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSG-GGHHHHHHHH--------------------------------
T ss_pred             cceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccH-HHHHHHHHHH--------------------------------
Confidence            334578999999999999974 899999999875432 2222222222                                


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc---------------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchh
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY---------------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHL  302 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~---------------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~  302 (433)
                               +    +.+..-+.+..++..               .....++||||++|++|.+++....+..      ++
T Consensus        60 ---------~----l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~  120 (284)
T 2a19_B           60 ---------K----LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK------LD  120 (284)
T ss_dssp             ---------H----CCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSC------CC
T ss_pred             ---------h----CCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCC------CC
Confidence                     1    122111222222211               1233689999999999999986542211      11


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          303 DRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       303 ~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +..        ...+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+.
T Consensus       121 ~~~--------~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  173 (284)
T 2a19_B          121 KVL--------ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK  173 (284)
T ss_dssp             HHH--------HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESS
T ss_pred             HHH--------HHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheecc
Confidence            111        12355678889999999999999999999999999999999999987653

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.72  E-value=3.9e-18  Score=164.58  Aligned_cols=187  Identities=18%  Similarity=0.135  Sum_probs=113.8

Q ss_pred             CCccccccccceeEEEEe------cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGST------LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l------~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|+||.||+|+.      .+|+.||||+.++.....   +...                               
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~-------------------------------   72 (313)
T 1t46_A           27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT---EREA-------------------------------   72 (313)
T ss_dssp             EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH---HHHH-------------------------------
T ss_pred             HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHH---HHHH-------------------------------
Confidence            456899999999999984      357899999988654321   1111                               


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCC-C-ch--hhhhhhH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGS-S-TH--LDRQKLD  308 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~-~-~~--~~~~~~~  308 (433)
                         +..|...+.++    .++++  +++++..  .....++||||++|++|.+++........... . ..  .....+.
T Consensus        73 ---~~~E~~~l~~l----~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  143 (313)
T 1t46_A           73 ---LMSELKVLSYL----GNHMN--IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD  143 (313)
T ss_dssp             ---HHHHHHHHHHH----CCCTT--BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCC
T ss_pred             ---HHHHHHHHhhc----ccCCC--eeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCC
Confidence               12233333332    12232  3333332  34567999999999999999875432100000 0 00  0000011


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH---------------HHHHHH
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------------FAMLAS  373 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------------~~~~~~  373 (433)
                      ..  ....+..++..++.+||+.|++|+|+||.||+++.++.++|+|||++..+.....               +.....
T Consensus       144 ~~--~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  221 (313)
T 1t46_A          144 LE--DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN  221 (313)
T ss_dssp             HH--HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH
T ss_pred             HH--HHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcC
Confidence            11  1123556788899999999999999999999999999999999999876533211               111111


Q ss_pred             HHHHHhcCHHHHHHHHHhc
Q 013944          374 IVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       374 ~~~~~~~d~~~~~~~l~~~  392 (433)
                      -......|.|+++..+++|
T Consensus       222 ~~~~~~~Di~slG~il~el  240 (313)
T 1t46_A          222 CVYTFESDVWSYGIFLWEL  240 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHH
Confidence            1112345778888877776

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.72  E-value=3.8e-18  Score=176.67  Aligned_cols=155  Identities=18%  Similarity=0.200  Sum_probs=97.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhh--HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHV--VVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~--~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.+......  ...+-...                     ++....     
T Consensus        39 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~---------------------~~~~~~-----   92 (504)
T 3q5i_A           39 FKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI---------------------EKFHEE-----   92 (504)
T ss_dssp             EEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC-------------------------------------CTHHH-----
T ss_pred             EEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhh---------------------HHHHHH-----
Confidence            3467899999999999996 578999999986532110  00000000                     000000     


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                       +.+|...+.    .+. ++  ++++++..  .....++|||||+|++|.+.+......+        +..        .
T Consensus        93 -~~~E~~~l~----~l~-hp--niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~--------~~~--------~  148 (504)
T 3q5i_A           93 -IYNEISLLK----SLD-HP--NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFD--------ECD--------A  148 (504)
T ss_dssp             -HHHHHHHHH----TCC-CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCC--------HHH--------H
T ss_pred             -HHHHHHHHH----hCC-CC--CCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCC--------HHH--------H
Confidence             122332222    222 22  23444433  3356799999999999998886543332        111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC---cEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g---~l~l~DFGl~~~l~~  364 (433)
                      ..+..++..++.+||+.|++|+|+||.||+++.++   .++|+|||++..+..
T Consensus       149 ~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  201 (504)
T 3q5i_A          149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK  201 (504)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCC
Confidence            23566788999999999999999999999998776   699999999976543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.72  E-value=1.5e-17  Score=162.64  Aligned_cols=188  Identities=16%  Similarity=0.133  Sum_probs=113.0

Q ss_pred             cCCccccccccceeEEEEe--------cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          160 ISEEPVAAASFGQVYRGST--------LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l--------~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      ...+.||+|+||+||+|+.        .+|+.||||+.+......   +...+                           
T Consensus        38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~---------------------------   87 (334)
T 2pvf_A           38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLSDL---------------------------   87 (334)
T ss_dssp             EEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHH---HHHHH---------------------------
T ss_pred             EEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHH---HHHHH---------------------------
Confidence            3457899999999999985        357899999988654321   11111                           


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCch--hhhhhh
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTH--LDRQKL  307 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~--~~~~~~  307 (433)
                             ..|...+.++    ..+++  +++++..  .....++||||++|++|.+++..............  .....+
T Consensus        88 -------~~E~~~l~~l----~~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  154 (334)
T 2pvf_A           88 -------VSEMEMMKMI----GKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM  154 (334)
T ss_dssp             -------HHHHHHHHHH----CCCTT--BCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CC
T ss_pred             -------HHHHHHHHHh----hcCCC--EeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccC
Confidence                   2233333222    12222  3333332  23567999999999999999875432110000000  000011


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH---------------HHHHHH
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH---------------QFAMLA  372 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~---------------~~~~~~  372 (433)
                      .... + ..+..+++.++.+||+.|++|+|+||+||+++.+|.++|+|||++..+....               ......
T Consensus       155 ~~~~-~-~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  232 (334)
T 2pvf_A          155 TFKD-L-VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF  232 (334)
T ss_dssp             CHHH-H-HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH
T ss_pred             CHHH-H-HHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhc
Confidence            1111 1 2355678889999999999999999999999999999999999987543210               011111


Q ss_pred             HHHHHHhcCHHHHHHHHHhc
Q 013944          373 SIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       373 ~~~~~~~~d~~~~~~~l~~~  392 (433)
                      .-......|.|+++..+++|
T Consensus       233 ~~~~~~~~Di~slG~il~el  252 (334)
T 2pvf_A          233 DRVYTHQSDVWSFGVLMWEI  252 (334)
T ss_dssp             HCEECHHHHHHHHHHHHHHH
T ss_pred             CCCcChHHHHHHHHHHHHHH
Confidence            10112346888888888875

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.72  E-value=1.6e-17  Score=164.05  Aligned_cols=197  Identities=17%  Similarity=0.206  Sum_probs=109.3

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhh----HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHV----VVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~----~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      |...+.||+|++|.||+|+..+|+.||||+.+......    ...+-...+                             
T Consensus        24 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~-----------------------------   74 (362)
T 3pg1_A           24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK-----------------------------   74 (362)
T ss_dssp             CEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHH-----------------------------
T ss_pred             eEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHH-----------------------------
Confidence            34467899999999999998789999999876432210    000000000                             


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                        .+..|...+.++    .+.+-+.+-.++..    .....++||||++| +|.+.+......       +++.      
T Consensus        75 --~~~~E~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~-------~~~~------  134 (362)
T 3pg1_A           75 --RVLREIRLLNHF----HHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIV-------ISPQ------  134 (362)
T ss_dssp             --HHHHHHHHHHHC----CCTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSC-------CCHH------
T ss_pred             --HHHHHHHHHHhC----CCcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccC-------CCHH------
Confidence              012233333222    22222222222221    12346999999995 666666532210       1111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLT  390 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~  390 (433)
                        ....+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++............      .....+...+.+.
T Consensus       135 --~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~------~~t~~y~aPE~~~  206 (362)
T 3pg1_A          135 --HIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHY------VTHRWYRAPELVM  206 (362)
T ss_dssp             --HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------------CGGGCCHHHHT
T ss_pred             --HHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccccccccee------cccceecCcHHhc
Confidence              11235667888999999999999999999999999999999999999765443221100      0001112222232


Q ss_pred             hcCCCCCCCChHHHHHHHHHHh
Q 013944          391 EMDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       391 ~~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      ..+...+..|+++++..+.+++
T Consensus       207 ~~~~~~~~~DiwslG~il~~l~  228 (362)
T 3pg1_A          207 QFKGFTKLVDMWSAGCVMAEMF  228 (362)
T ss_dssp             TCTTCCTHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcHhHHHhHHHHHHHHH
Confidence            3234455567776666666555

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.72  E-value=5.7e-18  Score=171.94  Aligned_cols=150  Identities=21%  Similarity=0.245  Sum_probs=100.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.+......  .   .                                  
T Consensus        99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~--~---~----------------------------------  139 (429)
T 3kvw_A           99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH--R---Q----------------------------------  139 (429)
T ss_dssp             EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHH--H---H----------------------------------
T ss_pred             EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchH--H---H----------------------------------
Confidence            34457899999999999985 578999999987542110  0   0                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|.+.+..++. .....+..+..++..+  ....++||||++| +|.+++.......      +++.        ...
T Consensus       140 ~~~E~~~l~~l~~-~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~------~~~~--------~~~  203 (429)
T 3kvw_A          140 AAEEIRILEHLRK-QDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQG------FSLP--------LVR  203 (429)
T ss_dssp             HHHHHHHHHHHHT-TCTTSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCC------CCHH--------HHH
T ss_pred             HHHHHHHHHHHhh-ccccCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCC------CCHH--------HHH
Confidence            0112222222221 2222334455555443  3667999999974 7888776542211      1111        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc--EEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ--IGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~--l~l~DFGl~~~l~  363 (433)
                      .+..+++.+|.+||+.|++|+|+||+||+++.++.  ++|+|||++....
T Consensus       204 ~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~  253 (429)
T 3kvw_A          204 KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH  253 (429)
T ss_dssp             HHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence            35677889999999999999999999999999887  9999999986543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.72  E-value=1e-17  Score=167.87  Aligned_cols=148  Identities=15%  Similarity=0.215  Sum_probs=98.5

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      |...+.||+|+||.||+|+..+|+.||||+.+......  .+...                                  +
T Consensus        58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~--~~~~~----------------------------------~  101 (390)
T 2zmd_A           58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN--QTLDS----------------------------------Y  101 (390)
T ss_dssp             EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCH--HHHHH----------------------------------H
T ss_pred             eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccH--HHHHH----------------------------------H
Confidence            33457899999999999998789999999886532211  01111                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .+|...+.++..   ..+  .+.+++.  ......+|||| +.|++|.+++......+        +..        ...
T Consensus       102 ~~Ei~~l~~l~~---~~~--~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~--------~~~--------~~~  159 (390)
T 2zmd_A          102 RNEIAYLNKLQQ---HSD--KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWE--------RKS  159 (390)
T ss_dssp             HHHHHHHHHHTT---TCT--TBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCC--------HHH--------HHH
T ss_pred             HHHHHHHHHccc---CCC--eEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCC--------HHH--------HHH
Confidence            223333333321   112  2334442  23456799999 67789999887543222        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +..+++.+|.+||+.|++|+|+||+||+++ +|.++|+|||++..+...
T Consensus       160 i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  207 (390)
T ss_dssp             HHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred             HHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence            556788899999999999999999999994 689999999999877543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.72  E-value=1.8e-16  Score=150.82  Aligned_cols=144  Identities=19%  Similarity=0.238  Sum_probs=97.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+........  .+...                                  +.
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~----------------------------------~~   53 (284)
T 3kk8_A           10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDFQK----------------------------------LE   53 (284)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCH--HHHHH----------------------------------HH
T ss_pred             hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCH--HHHHH----------------------------------HH
Confidence            456899999999999996 479999999976432111  11111                                  12


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    . ++  .+++++..  ..+..++||||++|++|.+.+......+        +..        ...+
T Consensus        54 ~e~~~l~~l----~-h~--~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~--------~~~--------~~~~  110 (284)
T 3kk8_A           54 REARICRKL----Q-HP--NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS--------EAD--------ASHC  110 (284)
T ss_dssp             HHHHHHHHC----C-CT--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCC--------HHH--------HHHH
T ss_pred             HHHHHHHHc----C-CC--CcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCC--------HHH--------HHHH
Confidence            233333222    2 22  23344433  3355699999999999988876543322        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCc---EEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQ---IGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~---l~l~DFGl~~~l~  363 (433)
                      ..++..++.+||+.|++|+|+||+||+++.++.   ++|+|||++....
T Consensus       111 ~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A          111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            567888999999999999999999999987655   9999999986543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.72  E-value=7.6e-18  Score=164.63  Aligned_cols=146  Identities=16%  Similarity=0.150  Sum_probs=96.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+.+......-.  ..                                  .
T Consensus        36 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--~~----------------------------------~   79 (329)
T 3gbz_A           36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGV--PG----------------------------------T   79 (329)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------------------------------------------
T ss_pred             EEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccccccc--ch----------------------------------h
Confidence            44567899999999999985 58999999998754322100  00                                  0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+. ++  .+++++..  .....++||||++| +|.+++......+        +.        ...
T Consensus        80 ~~~E~~~l~----~l~-h~--~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~--------~~--------~~~  135 (329)
T 3gbz_A           80 AIREVSLLK----ELQ-HR--NIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVS--------MR--------VIK  135 (329)
T ss_dssp             CHHHHHHGG----GCC-CT--TBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHCTTCC--------HH--------HHH
T ss_pred             HHHHHHHHH----HcC-CC--CcceEEEEEecCCEEEEEEecCCC-CHHHHHhhcCCCC--------HH--------HHH
Confidence            111222221    122 22  22333322  34567999999996 8888876543322        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEc-----cCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYT-----SSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~-----~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..+|.+||+.|++|+|+||+||+++     .++.++|+|||++..+..
T Consensus       136 ~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~  189 (329)
T 3gbz_A          136 SFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI  189 (329)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence            3566788899999999999999999999995     445699999999987654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.72  E-value=9.9e-18  Score=162.14  Aligned_cols=155  Identities=20%  Similarity=0.149  Sum_probs=91.4

Q ss_pred             cCCccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          160 ISEEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ...+.||+|++|.||+|+..    +++.||||+.+......  .+...                                
T Consensus        37 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~--------------------------------   82 (313)
T 3brb_A           37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ--REIEE--------------------------------   82 (313)
T ss_dssp             EEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCH--HHHHH--------------------------------
T ss_pred             eeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccch--hHHHH--------------------------------
Confidence            34568999999999999863    45689999987543221  01111                                


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccC----CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLS----RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                        +..|...+.+    +.+..-+.+-.++....    ...+++|||++|++|.+++.........  ..+++..      
T Consensus        83 --~~~e~~~l~~----l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~--~~~~~~~------  148 (313)
T 3brb_A           83 --FLSEAACMKD----FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP--KHIPLQT------  148 (313)
T ss_dssp             --HHHHHHHHHT----CCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSC--CCCCHHH------
T ss_pred             --HHHHHHHHhc----CCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCC--ccCCHHH------
Confidence              1223332222    22222122222221111    1349999999999999988532210000  0111111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                        ...+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       149 --~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~  199 (313)
T 3brb_A          149 --LLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYS  199 (313)
T ss_dssp             --HHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-----
T ss_pred             --HHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceeccc
Confidence              123556788899999999999999999999999999999999999987654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.72  E-value=1.2e-17  Score=160.34  Aligned_cols=150  Identities=18%  Similarity=0.129  Sum_probs=98.1

Q ss_pred             cccCCccccccccceeEEEEecC----CCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          158 SFISEEPVAAASFGQVYRGSTLD----GSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       158 ~~~~~~pigsgS~gqVy~a~l~~----G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      .+.-.+.||+|+||+||+|+..+    +..||||+.+.......   ...                              
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~---~~~------------------------------   72 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE---VSQ------------------------------   72 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHH---HHH------------------------------
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHH---HHH------------------------------
Confidence            34446789999999999998632    23689998775332210   000                              


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                          +..|...+.    .+.+.+-+.+-.++.......+++|||++|++|.+++......       .+...       +
T Consensus        73 ----~~~E~~~l~----~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~-------~~~~~-------~  130 (298)
T 3f66_A           73 ----FLTEGIIMK----DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-------PTVKD-------L  130 (298)
T ss_dssp             ----HHHHHHHHH----TCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCC-------CCHHH-------H
T ss_pred             ----HHHHHHHHH----hCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccC-------CCHHH-------H
Confidence                122332222    2222222222222223345679999999999999998643211       11111       1


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                       ..+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       131 -~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          131 -IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             -HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred             -HHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccc
Confidence             1245678889999999999999999999999999999999999997653

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.72  E-value=7.5e-18  Score=174.04  Aligned_cols=144  Identities=22%  Similarity=0.254  Sum_probs=92.9

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+......-  +..                                  .+.
T Consensus        41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~----------------------------------~~~   84 (494)
T 3lij_A           41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS--SNS----------------------------------KLL   84 (494)
T ss_dssp             EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C--TTH----------------------------------HHH
T ss_pred             EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch--HHH----------------------------------HHH
Confidence            356899999999999996 4899999999764321100  000                                  011


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.    .+. ++  ++++++..  .....++|||||+|++|.+.+......+        +..        ...+
T Consensus        85 ~E~~~l~----~l~-hp--niv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~--------~~~--------~~~i  141 (494)
T 3lij_A           85 EEVAVLK----LLD-HP--NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFN--------EVD--------AAVI  141 (494)
T ss_dssp             HHHHHHT----TCC-CT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCC--------HHH--------HHHH
T ss_pred             HHHHHHH----hCC-CC--CCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCC--------HHH--------HHHH
Confidence            1222221    121 22  23444433  2356799999999999988876543322        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccC---CcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~---g~l~l~DFGl~~~l~  363 (433)
                      ..++..++.+||+.|++|+|+||+||+++.+   +.++|+|||++..+.
T Consensus       142 ~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~  190 (494)
T 3lij_A          142 IKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE  190 (494)
T ss_dssp             HHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred             HHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence            6678889999999999999999999999764   559999999987653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.72  E-value=4.9e-18  Score=170.21  Aligned_cols=144  Identities=19%  Similarity=0.242  Sum_probs=98.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||+|+........    ...                                  +.
T Consensus        55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~----~~~----------------------------------~~   96 (387)
T 1kob_A           55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----KYT----------------------------------VK   96 (387)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----HHH----------------------------------HH
T ss_pred             EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhh----HHH----------------------------------HH
Confidence            456899999999999996 489999999986543211    001                                  11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|...+.    .+. ++  .+++++..  .....++||||++|++|.+++.....       .+++..        ...+
T Consensus        97 ~E~~il~----~l~-hp--nIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~-------~l~~~~--------~~~i  154 (387)
T 1kob_A           97 NEISIMN----QLH-HP--KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-------KMSEAE--------VINY  154 (387)
T ss_dssp             HHHHHHT----TCC-ST--TBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTC-------CBCHHH--------HHHH
T ss_pred             HHHHHHH----hCC-Cc--CCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcC-------CCCHHH--------HHHH
Confidence            2222221    122 22  23333332  24567999999999999998764321       111211        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEcc--CCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTS--SGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~--~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.+|.+||+.|++|+|+||+||+++.  ++.++|+|||++..+..
T Consensus       155 ~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~  203 (387)
T 1kob_A          155 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  203 (387)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence            667888999999999999999999999974  47899999999987653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.72  E-value=2.3e-18  Score=167.92  Aligned_cols=143  Identities=17%  Similarity=0.175  Sum_probs=95.7

Q ss_pred             CCccccccccceeEEEEe-cCCCE----EEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSI----VAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~----VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|+||.||+|+. .+|+.    ||+|+.........                                     .
T Consensus        17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~-------------------------------------~   59 (325)
T 3kex_A           17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS-------------------------------------F   59 (325)
T ss_dssp             EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSC-------------------------------------B
T ss_pred             eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHH-------------------------------------H
Confidence            456899999999999995 45654    88887653321100                                     0


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhhhHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      -.+..|...+.    .+. ++  ++++++..+ ....++||||++|++|.+++.... ..+        +..        
T Consensus        60 ~~~~~e~~~l~----~l~-h~--~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~--------~~~--------  116 (325)
T 3kex_A           60 QAVTDHMLAIG----SLD-HA--HIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALG--------PQL--------  116 (325)
T ss_dssp             CSCCHHHHHHH----TCC-CT--TBCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSC--------TTH--------
T ss_pred             HHHHHHHHHHh----cCC-CC--CcCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCC--------HHH--------
Confidence            00112222221    122 22  234444332 356789999999999999886432 111        111        


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ...+..+++.+|.+||+.|++|+|+||+||+++.+|+++|+|||++..+.
T Consensus       117 ~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A          117 LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence            12355678889999999999999999999999999999999999998764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.72  E-value=6.4e-18  Score=161.94  Aligned_cols=142  Identities=20%  Similarity=0.335  Sum_probs=97.8

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCc-hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL-RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~-~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+.+... .+.+..                                     
T Consensus        12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~-------------------------------------   54 (298)
T 1csn_A           12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD-------------------------------------   54 (298)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHH-------------------------------------
T ss_pred             eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHH-------------------------------------
Confidence            33457899999999999995 689999999875322 222222                                     


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                          |...+.++    .+.+  .+|.++..  .....++||||+ |++|.+++......       +++..        .
T Consensus        55 ----e~~~~~~l----~~~~--~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~-------~~~~~--------~  108 (298)
T 1csn_A           55 ----EYRTYKLL----AGCT--GIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRK-------FSVKT--------V  108 (298)
T ss_dssp             ----HHHHHHHT----TTCT--TCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTC-------CCHHH--------H
T ss_pred             ----HHHHHHHH----hcCC--CCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccC-------CCHHH--------H
Confidence                22222222    1122  23344332  345679999999 99999998753210       11111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc-----EEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ-----IGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~-----l~l~DFGl~~~l~  363 (433)
                      ..+..+++.++.+||+.|++|+|+||+||+++.+|.     ++|+|||++..+.
T Consensus       109 ~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~  162 (298)
T 1csn_A          109 AMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  162 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence            235677889999999999999999999999987776     9999999987543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.72  E-value=7.9e-18  Score=171.12  Aligned_cols=200  Identities=19%  Similarity=0.174  Sum_probs=115.4

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|+||.||.+...+|+.||||+......+....++.+++                                  
T Consensus        18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~----------------------------------   63 (434)
T 2rio_A           18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLT----------------------------------   63 (434)
T ss_dssp             EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHH----------------------------------
T ss_pred             eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHH----------------------------------
Confidence            3467899999999987766789999999886543332222222221                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                             +.    .++++  |++++...  ....+||||||+| +|.+++........ ......+.       .. ..+
T Consensus        64 -------~l----~~Hpn--Iv~~~~~~~~~~~~~lv~E~~~g-sL~~~l~~~~~~~~-~~~~~~~~-------~~-~~i  120 (434)
T 2rio_A           64 -------ES----DDHPN--VIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDE-NLKLQKEY-------NP-ISL  120 (434)
T ss_dssp             -------HH----TTSTT--BCCEEEEEECSSEEEEEECCCSE-EHHHHHHTC-------------C-------CH-HHH
T ss_pred             -------hc----cCCCC--cCeEEEEEecCCeEEEEEecCCC-CHHHHHhccCCCch-hhhhccch-------hH-HHH
Confidence                   11    11222  33333332  3456999999975 99998875422110 00000000       01 125


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccC-------------CcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSS-------------GQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQS  384 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~-------------g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~  384 (433)
                      ..+++.+|.+||+.|++|+|+||+||+++.+             +.++|+|||++..+..........  .....+....
T Consensus       121 ~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~--~~~~~gt~~y  198 (434)
T 2rio_A          121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN--LNNPSGTSGW  198 (434)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC----------------CCTT
T ss_pred             HHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceee--ecCCCCCCCc
Confidence            6678899999999999999999999999754             489999999999876543211000  0011122223


Q ss_pred             HHHHHHhc-------CCCCCCCChHHHHHHHHHHh--hchhcc
Q 013944          385 LVHSLTEM-------DVVRPGTNTLRVTMDLEDAL--GEVEFK  418 (433)
Q Consensus       385 ~~~~l~~~-------g~~~~~~d~~~~~~~l~~~l--~~~~~~  418 (433)
                      ++..+..-       +...+..|+++++..+.+++  |...|+
T Consensus       199 ~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~  241 (434)
T 2rio_A          199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG  241 (434)
T ss_dssp             SCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             cCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence            33333321       33456678887777777766  344443

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.72  E-value=2.2e-17  Score=167.11  Aligned_cols=153  Identities=18%  Similarity=0.231  Sum_probs=98.9

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhh-HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHV-VVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~-~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+..+..... ...+                               -....
T Consensus       137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~-------------------------------~~~~~  185 (419)
T 3i6u_A          137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSARE-------------------------------ADPAL  185 (419)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC---------------------------------------C
T ss_pred             EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhccccccc-------------------------------chhHH
Confidence            33456899999999999996 578999999876432110 0000                               00011


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      .+..|...+.++    . +++  +.+++..+ ....++||||++|++|.+++......+        +..        ..
T Consensus       186 ~~~~E~~~l~~l----~-hpn--iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~--------~~~--------~~  242 (419)
T 3i6u_A          186 NVETEIEILKKL----N-HPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLK--------EAT--------CK  242 (419)
T ss_dssp             CHHHHHHHHHHC----C-CTT--BCCCCEEEESSEEEEEEECCTTCBGGGGTSSSCCCC--------HHH--------HH
T ss_pred             HHHHHHHHHHhC----C-CCC--EeeEEEEEecCceEEEEEcCCCCcHHHHHhccCCCC--------HHH--------HH
Confidence            223344433332    2 222  22222222 345699999999999998876443222        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCC---cEEEEecccccccCHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSG---QIGFLDFGLLCRMERK  365 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g---~l~l~DFGl~~~l~~~  365 (433)
                      .+..+++.++.+||+.|++|+|+||.||+++.++   .++|+|||++..+...
T Consensus       243 ~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~  295 (419)
T 3i6u_A          243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET  295 (419)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--
T ss_pred             HHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCC
Confidence            3566788899999999999999999999997654   5999999999887654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.72  E-value=9.1e-18  Score=162.19  Aligned_cols=153  Identities=20%  Similarity=0.195  Sum_probs=93.1

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+.+........ ...                                  +
T Consensus        34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~----------------------------------~   78 (310)
T 2wqm_A           34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK-ARA----------------------------------D   78 (310)
T ss_dssp             EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHH-HHH----------------------------------H
T ss_pred             eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHH-HHH----------------------------------H
Confidence            44567899999999999995 58999999988753211000 000                                  0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.+    +. ++  .+++++..  .....++||||++|++|.+++.......    ...++..        ..
T Consensus        79 ~~~E~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~--------~~  139 (310)
T 2wqm_A           79 CIKEIDLLKQ----LN-HP--NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK----RLIPERT--------VW  139 (310)
T ss_dssp             HHHHHHHHHT----CC-CT--TBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTT----CCCCHHH--------HH
T ss_pred             HHHHHHHHHh----CC-CC--CEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccc----cCCCHHH--------HH
Confidence            1223333222    22 22  23344432  2356799999999999999886421000    0011111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .+..+++.++.+||+.|++|+|++|+||+++.+|.++|+|||++..+...
T Consensus       140 ~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~  189 (310)
T 2wqm_A          140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  189 (310)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred             HHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence            35567888999999999999999999999999999999999998876543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=1e-17  Score=163.35  Aligned_cols=142  Identities=18%  Similarity=0.167  Sum_probs=95.7

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|+||.||+|+. +|+.||||+...........+..+                                    
T Consensus        40 ~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~~------------------------------------   82 (337)
T 3mdy_A           40 QMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEI------------------------------------   82 (337)
T ss_dssp             EEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHH------------------------------------
T ss_pred             EEEeEeecCCCeEEEEEEE-CCceEEEEEEeccccchhhhHHHH------------------------------------
Confidence            3467899999999999987 599999999854322211111000                                    


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc---cC---CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY---LS---RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~---~~---~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                           .   ......+++  +.+++..   ..   ...++||||++|++|.+++.... .        ++..        
T Consensus        83 -----~---~~~~~~h~~--i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~--------~~~~--------  135 (337)
T 3mdy_A           83 -----Y---QTVLMRHEN--ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-L--------DAKS--------  135 (337)
T ss_dssp             -----H---TSTTCCCTT--BCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCC-B--------CHHH--------
T ss_pred             -----H---HHHhhcCCC--eeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccC-C--------CHHH--------
Confidence                 0   000012222  2233321   11   45699999999999999986421 1        1111        


Q ss_pred             HHHHHHHHHHHHHHHHHC--------CccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          314 LDLVNKGVEATLVQLLET--------GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~--------givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ...+..+++.++.+||..        |++|+|+||+||+++.++.++|+|||++..+...
T Consensus       136 ~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~  195 (337)
T 3mdy_A          136 MLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD  195 (337)
T ss_dssp             HHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccc
Confidence            123556788899999998        9999999999999999999999999999877554

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.71  E-value=1.1e-17  Score=165.19  Aligned_cols=153  Identities=22%  Similarity=0.274  Sum_probs=99.0

Q ss_pred             CChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 013944          151 SPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELG  229 (433)
Q Consensus       151 ~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~  229 (433)
                      ....+.|.  ..+.||+|+||+||+|+. .+|+.||||+.......... ....                          
T Consensus        50 ~~~~~~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~-~~~~--------------------------  100 (348)
T 1u5q_A           50 DDPEKLFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQD--------------------------  100 (348)
T ss_dssp             SCHHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHH-HHHH--------------------------
T ss_pred             cchhhhee--eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchH-HHHH--------------------------
Confidence            34444443  346799999999999995 68999999988654221100 0000                          


Q ss_pred             HHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhh
Q 013944          230 KGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKL  307 (433)
Q Consensus       230 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~  307 (433)
                              +..|...+.+    +. +++  +.+++..  .....++||||++| ++.+++......       +++..  
T Consensus       101 --------~~~E~~~l~~----l~-hpn--iv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~-------l~~~~--  155 (348)
T 1u5q_A          101 --------IIKEVRFLQK----LR-HPN--TIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKP-------LQEVE--  155 (348)
T ss_dssp             --------HHHHHHHHHH----CC-CTT--BCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSC-------CCHHH--
T ss_pred             --------HHHHHHHHHh----CC-CCC--EeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCC-------CCHHH--
Confidence                    1223322222    22 222  2233322  23567999999985 666666432210       11111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                            ...+..++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       156 ------~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          156 ------IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             ------HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             ------HHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence                  12355678889999999999999999999999999999999999987654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.71  E-value=1.5e-17  Score=160.24  Aligned_cols=143  Identities=23%  Similarity=0.236  Sum_probs=97.8

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|+||+|+. .+|+.||||+.+......    ...                                  +
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~----------------------------------~   53 (304)
T 2jam_A           12 IFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR----DSS----------------------------------L   53 (304)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------H----------------------------------H
T ss_pred             eeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccc----hHH----------------------------------H
Confidence            3457899999999999996 489999999987532110    000                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.+    +. +++  +++++.  ......++||||++|++|.+++......+        +..        ...
T Consensus        54 ~~e~~~l~~----l~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~  110 (304)
T 2jam_A           54 ENEIAVLKK----IK-HEN--IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYT--------EKD--------ASL  110 (304)
T ss_dssp             HHHHHHHHH----CC-CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCC--------HHH--------HHH
T ss_pred             HHHHHHHHh----CC-CCC--eeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCC--------HHH--------HHH
Confidence            122222222    22 222  233332  23456799999999999999886543322        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEE---ccCCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRY---TSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv---~~~g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.+||+.|++|+|+||.||++   +.++.++|+|||++....
T Consensus       111 ~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A          111 VIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             HHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            55678889999999999999999999999   678999999999987554

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.71  E-value=1.5e-17  Score=159.48  Aligned_cols=147  Identities=16%  Similarity=0.156  Sum_probs=99.7

Q ss_pred             ccCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|+||+|+.. +|+.||+|+.......... ....                                  
T Consensus        17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~-~~~~----------------------------------   61 (294)
T 2rku_A           17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH-QREK----------------------------------   61 (294)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHH-HHHH----------------------------------
T ss_pred             eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHH-HHHH----------------------------------
Confidence            445678999999999999964 7899999987643211100 0000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.    .+. ++  ++++++..  .....++||||++|++|.+++......+        +..        ..
T Consensus        62 ~~~e~~~l~----~l~-h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~~--------~~  118 (294)
T 2rku_A           62 MSMEISIHR----SLA-HQ--HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT--------EPE--------AR  118 (294)
T ss_dssp             HHHHHHHHH----TCC-CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCC--------HHH--------HH
T ss_pred             HHHHHHHHH----hCC-CC--CEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCC--------HHH--------HH
Confidence            111222221    222 22  23334433  2355699999999999999876543322        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|+++|+|||++..+.
T Consensus       119 ~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  166 (294)
T 2rku_A          119 YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  166 (294)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence            355678889999999999999999999999999999999999987653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.71  E-value=2.5e-17  Score=163.81  Aligned_cols=193  Identities=16%  Similarity=0.151  Sum_probs=109.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+.......  ....                                  
T Consensus        27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~----------------------------------   70 (371)
T 2xrw_A           27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT--HAKR----------------------------------   70 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHH--HHHH----------------------------------
T ss_pred             eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChH--HHHH----------------------------------
Confidence            33457899999999999985 5799999998865322110  0000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccC-----CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLS-----RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-----~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      +..|...+.    .+.+.+-+.+-.++....     ...++||||++| +|.+.+..  ..+        +.        
T Consensus        71 ~~~E~~~l~----~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~--------~~--------  127 (371)
T 2xrw_A           71 AYRELVLMK----CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM--ELD--------HE--------  127 (371)
T ss_dssp             HHHHHHHHH----HCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHHS--CCC--------HH--------
T ss_pred             HHHHHHHHH----hcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHhh--ccC--------HH--------
Confidence            011222221    222222222222222111     256999999986 56666541  111        11        


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhc
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~  392 (433)
                      ....+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..........   ..    .+....++..+..-
T Consensus       128 ~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~---~~----~gt~~y~aPE~~~~  200 (371)
T 2xrw_A          128 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT---PY----VVTRYYRAPEVILG  200 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC-----------------------CTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccccC---Cc----eecCCccCHHHhcC
Confidence            112356678899999999999999999999999999999999999998765432110   00    01111222222222


Q ss_pred             CCCCCCCChHHHHHHHHHHh-hchhc
Q 013944          393 DVVRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       393 g~~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      +...+..|+++++..+.+++ |..+|
T Consensus       201 ~~~~~~~DiwslG~il~el~~g~~pf  226 (371)
T 2xrw_A          201 MGYKENVDIWSVGCIMGEMIKGGVLF  226 (371)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCCCchHhHHHHHHHHHHHHhCCCCC
Confidence            33456677887777776665 44433

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.71  E-value=2.4e-17  Score=157.83  Aligned_cols=172  Identities=16%  Similarity=0.121  Sum_probs=109.2

Q ss_pred             ccccccccceeEEEEe---cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          163 EPVAAASFGQVYRGST---LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l---~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      +.||+|++|.||+|..   .+++.||||+.+........  ...                                  +.
T Consensus        23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~--~~~----------------------------------~~   66 (291)
T 1xbb_A           23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KDE----------------------------------LL   66 (291)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHH--HHH----------------------------------HH
T ss_pred             CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHH--HHH----------------------------------HH
Confidence            3899999999999964   35789999998754221100  000                                  12


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      .|...+.    .+.+ +  .+++++.. .....++||||++|++|.+++......+        +..        ...+.
T Consensus        67 ~e~~~l~----~l~h-~--~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~i~  123 (291)
T 1xbb_A           67 AEANVMQ----QLDN-P--YIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK--------DKN--------IIELV  123 (291)
T ss_dssp             HHHHHHH----TCCC-T--TBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCC--------HHH--------HHHHH
T ss_pred             HHHHHHH----hCCC-C--CEEEEEEEECCCCcEEEEEeCCCCCHHHHHHhCcCCC--------HHH--------HHHHH
Confidence            2322222    2222 2  23333332 2356799999999999999987543222        111        12356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH----------------HHHHHHHHHHHhcCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ----------------FAMLASIVHIVNGDW  382 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~----------------~~~~~~~~~~~~~d~  382 (433)
                      .++..++.+||+.|++|+|+||.||+++.++.++|+|||++..+.....                +.....-......|.
T Consensus       124 ~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  203 (291)
T 1xbb_A          124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV  203 (291)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHH
T ss_pred             HHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhH
Confidence            6788899999999999999999999999999999999999876532210                011110001234688


Q ss_pred             HHHHHHHHhcC
Q 013944          383 QSLVHSLTEMD  393 (433)
Q Consensus       383 ~~~~~~l~~~g  393 (433)
                      |+++..+++|-
T Consensus       204 ~slG~il~~l~  214 (291)
T 1xbb_A          204 WSFGVLMWEAF  214 (291)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88888888753

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.71  E-value=1.2e-17  Score=159.98  Aligned_cols=144  Identities=18%  Similarity=0.245  Sum_probs=91.0

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|+||.||+|+.  ...||||+.+......  .+...+                                  .+
T Consensus        28 ~~~~lG~G~~g~Vy~~~~--~~~vavK~~~~~~~~~--~~~~~~----------------------------------~~   69 (289)
T 3og7_A           28 VGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTP--QQLQAF----------------------------------KN   69 (289)
T ss_dssp             EEEEEEECSSEEEEEEES--SSEEEEEEESCSSCCH--HHHHHH----------------------------------HH
T ss_pred             eeeEecCCCCeEEEEEEE--cCceEEEEEeccCCCH--HHHHHH----------------------------------HH
Confidence            356899999999999975  3469999987543221  111111                                  12


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeec-ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFR-YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |...+.+    +.   +..+..++. ......++||||++|++|.+++......       +++..       + ..+..
T Consensus        70 E~~~l~~----l~---h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~-------~-~~i~~  127 (289)
T 3og7_A           70 EVGVLRK----TR---HVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-------FEMKK-------L-IDIAR  127 (289)
T ss_dssp             HHHHHTT----CC---CTTBCCEEEEECSSSCEEEEECCCEEEHHHHHTTC----------CCHHH-------H-HHHHH
T ss_pred             HHHHHHh----CC---CCcEEEEEeeccCCccEEEEEecCCCcHHHHHhhccCC-------CCHHH-------H-HHHHH
Confidence            2222211    21   222333333 2335669999999999999888543210       11111       1 23556


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..+|.+||+.|++|+|+||+||+++.+|.++|+|||++.....
T Consensus       128 qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A          128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             HHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             HHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccc
Confidence            788899999999999999999999999999999999999876653

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.71  E-value=1.6e-17  Score=171.26  Aligned_cols=145  Identities=21%  Similarity=0.223  Sum_probs=97.7

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+......  .+...                                  +.
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~----------------------------------~~   69 (486)
T 3mwu_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTST----------------------------------IL   69 (486)
T ss_dssp             EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC--SCHHH----------------------------------HH
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc--hHHHH----------------------------------HH
Confidence            456899999999999996 489999999975311100  00000                                  11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++    . +++  +++++..  .....++||||++|++|.+.+......+        +..        ...+
T Consensus        70 ~E~~~l~~l----~-hpn--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--------~~~--------~~~i  126 (486)
T 3mwu_A           70 REVELLKKL----D-HPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--------EHD--------AARI  126 (486)
T ss_dssp             HHHHHHHHC----C-CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCC--------HHH--------HHHH
T ss_pred             HHHHHHHhC----C-CCC--cCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCC--------HHH--------HHHH
Confidence            232222222    2 222  3333332  3456799999999999998886543322        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEc---cCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYT---SSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~---~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.+||+.|++|+|+||+||+++   .++.++|+|||++..+..
T Consensus       127 ~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  176 (486)
T 3mwu_A          127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (486)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred             HHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence            66788899999999999999999999995   456899999999976643

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.71  E-value=3.2e-17  Score=159.76  Aligned_cols=143  Identities=18%  Similarity=0.120  Sum_probs=98.3

Q ss_pred             cCCccccccccceeEEEEe-----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          160 ISEEPVAAASFGQVYRGST-----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ...+.||+|++|.||+|+.     .+|+.||||+.+.......    ..                               
T Consensus        26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~----~~-------------------------------   70 (327)
T 3lxl_A           26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RD-------------------------------   70 (327)
T ss_dssp             EEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHH----HH-------------------------------
T ss_pred             hhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHH----HH-------------------------------
Confidence            3456899999999999984     4789999999876432211    00                               


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  310 (433)
                         +..|...+.+    +. +++  +++++..    -....++||||++|++|.+++......       +++.      
T Consensus        71 ---~~~E~~~l~~----l~-h~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~------  127 (327)
T 3lxl_A           71 ---FQREIQILKA----LH-SDF--IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-------LDAS------  127 (327)
T ss_dssp             ---HHHHHHHHHT----CC-CTT--BCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGG-------CCHH------
T ss_pred             ---HHHHHHHHHh----cC-CCc--eeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccC-------CCHH------
Confidence               1223332222    22 222  3333221    234568999999999999998653210       1111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          311 WRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                        ....+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+
T Consensus       128 --~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          128 --RLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             --HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             --HHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence              11235667888999999999999999999999999999999999998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.71  E-value=4.4e-18  Score=164.47  Aligned_cols=158  Identities=16%  Similarity=0.131  Sum_probs=100.2

Q ss_pred             cCCccccccccceeEEEEe------cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          160 ISEEPVAAASFGQVYRGST------LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l------~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      ...+.||+|+||.||+|+.      .+|+.||||+.+........   ..                              
T Consensus        30 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---~~------------------------------   76 (316)
T 2xir_A           30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH---RA------------------------------   76 (316)
T ss_dssp             EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHH---HH------------------------------
T ss_pred             eeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHH---HH------------------------------
Confidence            3457899999999999984      35789999998765432111   01                              


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecc---cCCceEEEeeccCCCCcchhhhhccCCCCC-CCCch-hhhhhhH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRY---LSRKRVLTMEWMVGESPTDLISLSTGSSVD-GSSTH-LDRQKLD  308 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~---~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~-~~~~~-~~~~~~~  308 (433)
                          +..|...+.++    .++++  +++++..   -....+++|||++|++|.+++......... ..... .......
T Consensus        77 ----~~~E~~~l~~l----~~hp~--iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  146 (316)
T 2xir_A           77 ----LMSELKILIHI----GHHLN--VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT  146 (316)
T ss_dssp             ----HHHHHHHHHHH----CCCTT--BCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEE
T ss_pred             ----HHHHHHHHHhc----ccCCC--eeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccC
Confidence                12233333332    12222  3333332   224479999999999999998754321000 00000 0000011


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..  ....+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+
T Consensus       147 ~~--~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  198 (316)
T 2xir_A          147 LE--HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI  198 (316)
T ss_dssp             HH--HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred             HH--HHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCcccccc
Confidence            11  11235567889999999999999999999999999999999999998754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.70  E-value=1.1e-17  Score=158.92  Aligned_cols=152  Identities=16%  Similarity=0.214  Sum_probs=99.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||+|+.+......  .+...                                  
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~----------------------------------   51 (279)
T 2w5a_A            8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQM----------------------------------   51 (279)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCH--HHHHH----------------------------------
T ss_pred             eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCH--HHHHH----------------------------------
Confidence            34457899999999999996 489999999986543211  01111                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      +..|...+.++    . ++  .+++++..    .....++||||++|++|.+++.......    ...++.        .
T Consensus        52 ~~~e~~~l~~l----~-h~--~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~--------~  112 (279)
T 2w5a_A           52 LVSEVNLLREL----K-HP--NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER----QYLDEE--------F  112 (279)
T ss_dssp             HHHHHHHHHHC----C-CT--TBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTT----CCCCHH--------H
T ss_pred             HHHHHHHHHhc----C-CC--CCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccC----CCCCHH--------H
Confidence            12233333222    2 22  23334332    2356799999999999999986432100    001111        1


Q ss_pred             HHHHHHHHHHHHHHHHHCC-----ccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          314 LDLVNKGVEATLVQLLETG-----ILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~g-----ivH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ...+..++..++.+||..|     ++|+|++|+||+++.++.++|+|||++..+...
T Consensus       113 ~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~  169 (279)
T 2w5a_A          113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD  169 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc
Confidence            1235667888999999999     999999999999999999999999998876543

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.70  E-value=1.1e-16  Score=152.14  Aligned_cols=173  Identities=20%  Similarity=0.203  Sum_probs=112.0

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|++|+||+|+..+++.||||+.+.+....     ..                                  +..
T Consensus        17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----~~----------------------------------~~~   57 (279)
T 1qpc_A           17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-----DA----------------------------------FLA   57 (279)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH-----HH----------------------------------HHH
T ss_pred             heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccH-----HH----------------------------------HHH
Confidence            356899999999999998888899999987543210     00                                  122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |...+.++    .+ ++  +++++..+ ....++||||++|++|.+++....+.            ......  ...+..
T Consensus        58 E~~~l~~l----~h-~~--i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~------------~~~~~~--~~~i~~  116 (279)
T 1qpc_A           58 EANLMKQL----QH-QR--LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGI------------KLTINK--LLDMAA  116 (279)
T ss_dssp             HHHHHHHC----CC-TT--BCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHH------------TCCHHH--HHHHHH
T ss_pred             HHHHHHhC----CC-cC--cceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCC------------CCCHHH--HHHHHH
Confidence            33322222    22 22  23333322 35679999999999999988643210            011111  123566


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH--------------HHHHHHHHHHHHhcCHHHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH--------------QFAMLASIVHIVNGDWQSL  385 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~--------------~~~~~~~~~~~~~~d~~~~  385 (433)
                      ++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+....              .......-......|.+++
T Consensus       117 qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  196 (279)
T 1qpc_A          117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF  196 (279)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHH
Confidence            78889999999999999999999999999999999999987553211              0111110001234588888


Q ss_pred             HHHHHhcC
Q 013944          386 VHSLTEMD  393 (433)
Q Consensus       386 ~~~l~~~g  393 (433)
                      +..+++|-
T Consensus       197 G~il~el~  204 (279)
T 1qpc_A          197 GILLTEIV  204 (279)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88887763

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.70  E-value=8e-18  Score=162.03  Aligned_cols=149  Identities=23%  Similarity=0.315  Sum_probs=100.7

Q ss_pred             ChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 013944          152 PVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGK  230 (433)
Q Consensus       152 ~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~  230 (433)
                      ..++.|.  ..+.||+|++|+||+|+. .+|+.||||+.+......   ....                           
T Consensus        19 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~---------------------------   66 (303)
T 3a7i_A           19 DPEELFT--KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED---EIED---------------------------   66 (303)
T ss_dssp             CGGGTEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST---THHH---------------------------
T ss_pred             ChHHHHH--HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHH---HHHH---------------------------
Confidence            3444443  356899999999999985 589999999986543211   0001                           


Q ss_pred             HhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhH
Q 013944          231 GLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLD  308 (433)
Q Consensus       231 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~  308 (433)
                             +..|...+.+    +. ++  .+++++..  .....++||||++|++|.+++... ..        ++..   
T Consensus        67 -------~~~e~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~--------~~~~---  120 (303)
T 3a7i_A           67 -------IQQEITVLSQ----CD-SP--YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PL--------DETQ---  120 (303)
T ss_dssp             -------HHHHHHHHHH----CC-CT--TBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTS-CC--------CHHH---
T ss_pred             -------HHHHHHHHHh----CC-CC--CEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcC-CC--------CHHH---
Confidence                   1122222211    22 22  23333332  235679999999999999987532 11        1111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                           ...+..+++.++.+||+.|++|+|+||+||+++.+|+++|+|||++..+.
T Consensus       121 -----~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  170 (303)
T 3a7i_A          121 -----IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT  170 (303)
T ss_dssp             -----HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred             -----HHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecC
Confidence                 12355678889999999999999999999999999999999999987653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.70  E-value=5.4e-17  Score=158.02  Aligned_cols=196  Identities=16%  Similarity=0.191  Sum_probs=110.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.+.........+  .                                   
T Consensus        25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~--~-----------------------------------   67 (327)
T 3aln_A           25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQ--L-----------------------------------   67 (327)
T ss_dssp             EC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHH--H-----------------------------------
T ss_pred             hehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHH--H-----------------------------------
Confidence            3456899999999999996 4899999999876543211100  0                                   


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|..   .+....   .+-.+++++..  .....++||||++| +|.+++....... .  ...++.        ....
T Consensus        68 ~~e~~---~~~~~~---~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~-~--~~~~~~--------~~~~  129 (327)
T 3aln_A           68 LMDLD---VVMRSS---DCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVL-D--DVIPEE--------ILGK  129 (327)
T ss_dssp             HHHHH---HHHSSC---CCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTT-C--CCCCHH--------HHHH
T ss_pred             HHHHH---HHHHcC---CCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhh-c--ccCcHH--------HHHH
Confidence            01111   111111   22223444432  23567899999997 6776665311000 0  001111        1123


Q ss_pred             HHHHHHHHHHHHHHC-CccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHH----h
Q 013944          317 VNKGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLT----E  391 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~-givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~----~  391 (433)
                      +..++..++.+||.. |++|+|+||.||+++.+|.++|+|||++..+........       ..+....++....    .
T Consensus       130 i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~-------~~gt~~y~aPE~~~~~~~  202 (327)
T 3aln_A          130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTR-------DAGCRPYMAPERIDPSAS  202 (327)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----------------------------------
T ss_pred             HHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccccc-------CCCCccccCceeeccccC
Confidence            556788899999998 999999999999999999999999999988765322111       0112223333333    2


Q ss_pred             cCCCCCCCChHHHHHHHHHHh-hchhc
Q 013944          392 MDVVRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       392 ~g~~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      -+......|+++++..+.+++ |...|
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~pf  229 (327)
T 3aln_A          203 RQGYDVRSDVWSLGITLYELATGRFPY  229 (327)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHSCCCS
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            223456678888887777776 44444

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.70  E-value=8.7e-17  Score=167.85  Aligned_cols=146  Identities=17%  Similarity=0.128  Sum_probs=99.0

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      +..+.||+|+||+||+|+ ..|+.+++|...+.....-..+-...                              .-.+.
T Consensus       339 ~~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~------------------------------~~~~~  387 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLDENIR------------------------------KSRTA  387 (540)
T ss_dssp             ---------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHHHHHH------------------------------HHHHH
T ss_pred             CCCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhhhHHH------------------------------HHHHH
Confidence            456789999999999995 47899999987653321111010000                              00124


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      +|.+.+.++     +++++..|..+.......+|||||++|++|.+++...                        ..+..
T Consensus       388 ~E~~il~~l-----~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~~------------------------~~i~~  438 (540)
T 3en9_A          388 REARYLALV-----KDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN------------------------LDIAY  438 (540)
T ss_dssp             HHHHHHHHG-----GGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTTC------------------------THHHH
T ss_pred             HHHHHHHhc-----CCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHHH------------------------HHHHH
Confidence            455555554     2455666677777777889999999999999987520                        12556


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ  367 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~  367 (433)
                      ++..++.+||+.|++|+|+||+||+++.  +++|+|||+++.+.....
T Consensus       439 qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~  484 (540)
T 3en9_A          439 KIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED  484 (540)
T ss_dssp             HHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred             HHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence            7788999999999999999999999988  999999999999876543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.70  E-value=1.7e-17  Score=165.32  Aligned_cols=136  Identities=15%  Similarity=0.032  Sum_probs=84.2

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||+||+|+. .+|+.||||+.+.....     ...                                  +
T Consensus        40 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~----------------------------------~   80 (397)
T 1wak_A           40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY-----TET----------------------------------A   80 (397)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH-----HHH----------------------------------H
T ss_pred             EEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcc-----hHH----------------------------------H
Confidence            3456899999999999985 57899999998754210     000                                  1


Q ss_pred             HHHHHHHHHHHHhcCCC-CCeEeceeeccc------CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          239 TLEAANASEFQESHSPF-PFIHVPKVFRYL------SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~-~~v~vP~v~~~~------~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                      ..|.+.+.++....... .+..+.+++..+      ....+|||||+.| ++.+.+.......      +++.       
T Consensus        81 ~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~------~~~~-------  146 (397)
T 1wak_A           81 LDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQG------LPLP-------  146 (397)
T ss_dssp             HHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCC-BHHHHHHHTTTSC------CCHH-------
T ss_pred             HHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCc-cHHHHHHhcccCC------CCHH-------
Confidence            22333344443321111 123344444432      2456999999954 5555443321100      1111       


Q ss_pred             HHHHHHHHHHHHHHHHHHHC-CccccCCCCCceEEccCC
Q 013944          312 RLLDLVNKGVEATLVQLLET-GILHADPHPGNLRYTSSG  349 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~-givH~DlhpgNilv~~~g  349 (433)
                       ....+..+++.+|.+||+. |++|+|+||+|||++.+|
T Consensus       147 -~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          147 -CVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             -HHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             -HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence             1123567788999999998 999999999999998775

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.70  E-value=4.7e-18  Score=165.43  Aligned_cols=150  Identities=17%  Similarity=0.205  Sum_probs=99.0

Q ss_pred             ccCCccccccccceeEEEEe--cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGST--LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l--~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.||+|+||.||+|+.  .+|+.||||+.+.....     ...+                                
T Consensus        16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-----~~~~--------------------------------   58 (339)
T 1z57_A           16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY-----CEAA--------------------------------   58 (339)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHH-----HHHH--------------------------------
T ss_pred             eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCch-----hHHH--------------------------------
Confidence            33456899999999999985  37899999998753211     0111                                


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                        ..|...+..+... .......+++++..  .....++||||+ |++|.+++.......      +++..        .
T Consensus        59 --~~e~~~l~~l~~~-~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~------~~~~~--------~  120 (339)
T 1z57_A           59 --RSEIQVLEHLNTT-DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLP------FRLDH--------I  120 (339)
T ss_dssp             --HHHHHHHHHHHHH-CTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCC------CCHHH--------H
T ss_pred             --HHHHHHHHHhhhc-CCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCC------CcHHH--------H
Confidence              1222222233221 11122234444433  245679999999 889998886543211      11111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEcc-------------------CCcEEEEecccccccC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS-------------------SGQIGFLDFGLLCRME  363 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~-------------------~g~l~l~DFGl~~~l~  363 (433)
                      ..+..++..+|.+||+.|++|+|+||+||+++.                   ++.++|+|||++....
T Consensus       121 ~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~  188 (339)
T 1z57_A          121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD  188 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETT
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCc
Confidence            235667888999999999999999999999987                   6789999999987654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.70  E-value=6.9e-17  Score=156.37  Aligned_cols=148  Identities=16%  Similarity=0.154  Sum_probs=96.7

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+........    ...+                                 
T Consensus        31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~---------------------------------   73 (317)
T 2buj_A           31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD----REEA---------------------------------   73 (317)
T ss_dssp             EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHH----HHHH---------------------------------
T ss_pred             EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHH----HHHH---------------------------------
Confidence            33456899999999999996 689999999875432211    1111                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                       ..|...+.    .+.+ +  .+++++..      .....++||||++|++|.+++.......    ..+++..      
T Consensus        74 -~~E~~~l~----~l~h-~--~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~----~~~~~~~------  135 (317)
T 2buj_A           74 -QREADMHR----LFNH-P--NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG----NFLTEDQ------  135 (317)
T ss_dssp             -HHHHHHHH----TCCC-T--TBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTT----CCCCHHH------
T ss_pred             -HHHHHHHh----hcCC-C--CeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcC----CCCCHHH------
Confidence             12222222    2222 2  22333322      1235689999999999999887531100    0011111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                        ...+..+++.+|.+||..|++|+|+||.||+++.++.++|+|||++....
T Consensus       136 --~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          136 --ILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             --HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred             --HHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence              12356678889999999999999999999999999999999999887653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.70  E-value=7e-18  Score=164.74  Aligned_cols=145  Identities=19%  Similarity=0.170  Sum_probs=92.8

Q ss_pred             cCCccccccccceeEEEEe-cCCCE----EEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSI----VAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~----VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ...+.||+|+||.||+|+. .+|+.    ||+|..+........   .                                
T Consensus        18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~---~--------------------------------   62 (327)
T 3poz_A           18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN---K--------------------------------   62 (327)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CH---H--------------------------------
T ss_pred             ccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHH---H--------------------------------
Confidence            3456899999999999995 45654    588877543211100   0                                


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                        .+..|...+.++    . ++  ++++++..+ ....+++|||+++++|.+++....+.       +++..        
T Consensus        63 --~~~~E~~~l~~l----~-h~--~iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~-------~~~~~--------  118 (327)
T 3poz_A           63 --EILDEAYVMASV----D-NP--HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-------IGSQY--------  118 (327)
T ss_dssp             --HHHHHHHHHHHC----C-BT--TBCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTS-------CCHHH--------
T ss_pred             --HHHHHHHHHHhC----C-CC--CEeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCC-------CCHHH--------
Confidence              112233333222    2 12  233444322 35578999999999999988753211       11111        


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ...+..+++.+|.+||+.|++|+|+||+||+++.+|.++|+|||+++.+.
T Consensus       119 ~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A          119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence            12355678889999999999999999999999999999999999987664

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.70  E-value=2e-17  Score=160.63  Aligned_cols=146  Identities=21%  Similarity=0.280  Sum_probs=98.1

Q ss_pred             ccCCccccccccceeEEEEe--cCCCEEEEEEcCCCch-----hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          159 FISEEPVAAASFGQVYRGST--LDGSIVAVKVQRPNLR-----HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l--~~G~~VAVKv~~p~~~-----~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      |...+.||+|++|.||+|+.  .+|+.||||+.+....     .....++.+                            
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~----------------------------   64 (326)
T 1blx_A           13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV----------------------------   64 (326)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHH----------------------------
T ss_pred             eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHH----------------------------
Confidence            34467899999999999996  4689999998764321     122222222                            


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc-------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhh
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY-------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDR  304 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~  304 (433)
                                   +..+.. +.+ ++  +++++..       .....++||||++| +|.+++.......      +++.
T Consensus        65 -------------l~~l~~-~~h-~~--i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~------~~~~  120 (326)
T 1blx_A           65 -------------LRHLET-FEH-PN--VVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG------VPTE  120 (326)
T ss_dssp             -------------HHHHHH-TCC-TT--BCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTC------SCHH
T ss_pred             -------------HHhhhc-cCC-CC--eEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCC------CCHH
Confidence                         222211 111 21  2333221       23566999999995 8888876532211      1111


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          305 QKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       305 ~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .        ...+..++..+|.+||..|++|+|+||+||+++.+|.++|+|||++..+..
T Consensus       121 ~--------~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  172 (326)
T 1blx_A          121 T--------IKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF  172 (326)
T ss_dssp             H--------HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG
T ss_pred             H--------HHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccC
Confidence            1        123556788899999999999999999999999999999999999987654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.69  E-value=5.6e-17  Score=155.78  Aligned_cols=140  Identities=23%  Similarity=0.379  Sum_probs=94.9

Q ss_pred             CCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+.. +|+.||+|+..........                                      ++.
T Consensus        23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~--------------------------------------~~~   64 (302)
T 2j7t_A           23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE--------------------------------------DYI   64 (302)
T ss_dssp             EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHH--------------------------------------HHH
T ss_pred             ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHH--------------------------------------HHH
Confidence            3567999999999999964 7999999998653221100                                      012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .|...+.+    +. +++  +++++..  .....++||||++|++|.+++.... ..+        +..        ...
T Consensus        65 ~e~~~l~~----l~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~--------~~~--------~~~  121 (302)
T 2j7t_A           65 VEIEILAT----CD-HPY--IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT--------EPQ--------IQV  121 (302)
T ss_dssp             HHHHHHHH----CC-CTT--BCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCC--------HHH--------HHH
T ss_pred             HHHHHHhc----CC-CCC--EeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCC--------HHH--------HHH
Confidence            23322222    22 222  3333332  2456799999999999998876432 111        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      +..++..++.+||..|++|+|+||.||+++.+|.++|+|||++..
T Consensus       122 ~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  166 (302)
T 2j7t_A          122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK  166 (302)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence            556788899999999999999999999999999999999998754

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.69  E-value=1.5e-17  Score=160.83  Aligned_cols=221  Identities=16%  Similarity=0.118  Sum_probs=131.9

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+.+........                                .......
T Consensus        33 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------~~~~~~~   80 (312)
T 2iwi_A           33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWS--------------------------------PLSDSVT   80 (312)
T ss_dssp             CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC----------------------------------------CC
T ss_pred             eEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccc--------------------------------cchhhHH
Confidence            33467899999999999985 58999999998754321100                                0011122


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeec-cCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEW-MVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~-i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      +..|...+.++.....   +-++++++..+  ....++|||| ++|++|.+++......+        +..        .
T Consensus        81 ~~~e~~~l~~l~~~~~---h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~--------~~~--------~  141 (312)
T 2iwi_A           81 CPLEVALLWKVGAGGG---HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLG--------EGP--------S  141 (312)
T ss_dssp             CCHHHHHHHHHHSSCC---CSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCC--------HHH--------H
T ss_pred             HHHHHHHHHhhcccCC---CCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCC--------HHH--------H
Confidence            3344444444432222   22344444432  3567999999 89999999987543322        111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEc-cCCcEEEEecccccccCHHHH-----------HHHHHH-HHHHHhcC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMERKHQ-----------FAMLAS-IVHIVNGD  381 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~-~~g~l~l~DFGl~~~l~~~~~-----------~~~~~~-~~~~~~~d  381 (433)
                      ..+..++..++.+||+.|++|+|+||+||+++ .+|.++|+|||++..+.....           ...... .......|
T Consensus       142 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D  221 (312)
T 2iwi_A          142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPAT  221 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccch
Confidence            23566788899999999999999999999998 789999999999876532110           011110 00123468


Q ss_pred             HHHHHHHHHhcCCCCCCCCh------------HHHHHHHHHHhhchhccCCCCCccccccc
Q 013944          382 WQSLVHSLTEMDVVRPGTNT------------LRVTMDLEDALGEVEFKDGIPDVKFSRVR  430 (433)
Q Consensus       382 ~~~~~~~l~~~g~~~~~~d~------------~~~~~~l~~~l~~~~~~~~~~~~~~~~~l  430 (433)
                      .++++..++++-......+.            ..+...+.+++...+..+|-.+.++.+++
T Consensus       222 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l  282 (312)
T 2iwi_A          222 VWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL  282 (312)
T ss_dssp             HHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence            88888888776332221110            11123445555555555566666666554

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.69  E-value=4.5e-17  Score=173.94  Aligned_cols=145  Identities=21%  Similarity=0.235  Sum_probs=98.5

Q ss_pred             CccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|+||.||+|+..    .+..||||+.+.........                                     .
T Consensus       395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~-------------------------------------~  437 (656)
T 2j0j_A          395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-------------------------------------K  437 (656)
T ss_dssp             EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHH-------------------------------------H
T ss_pred             eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHH-------------------------------------H
Confidence            356999999999999863    35679999987543321110                                     0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      +..|...+.++    . ++  ++++++..+ .+..++||||++|++|.+++..... +      .+...        ...
T Consensus       438 ~~~E~~~l~~l----~-Hp--nIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~-~------l~~~~--------~~~  495 (656)
T 2j0j_A          438 FLQEALTMRQF----D-HP--HIVKLIGVITENPVWIIMELCTLGELRSFLQVRKF-S------LDLAS--------LIL  495 (656)
T ss_dssp             HHHHHHHHHHC----C-CT--TBCCEEEEECSSSCEEEEECCTTCBHHHHHHHTTT-T------CCHHH--------HHH
T ss_pred             HHHHHHHHHhC----C-CC--CCCeEEEEEecCceEEEEEcCCCCcHHHHHHhccC-C------CCHHH--------HHH
Confidence            12233333222    2 22  233333322 3567999999999999999874321 0      11111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +..+++.+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+...
T Consensus       496 i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~  544 (656)
T 2j0j_A          496 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  544 (656)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred             HHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence            5667889999999999999999999999999999999999999877543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.69  E-value=1.6e-17  Score=161.85  Aligned_cols=149  Identities=21%  Similarity=0.193  Sum_probs=94.5

Q ss_pred             CCccccccccceeEEEEe------cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGST------LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l------~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|++|.||+|+.      .+|+.||||+.+.........                                   
T Consensus        34 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~-----------------------------------   78 (327)
T 2yfx_A           34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL-----------------------------------   78 (327)
T ss_dssp             EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHH-----------------------------------
T ss_pred             EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHH-----------------------------------
Confidence            356899999999999984      367899999986543221110                                   


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                        ++..|...+.++    . +++  +++++..  .....++||||++|++|.+++........ ....++..      . 
T Consensus        79 --~~~~E~~~l~~l----~-h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~-~~~~~~~~------~-  141 (327)
T 2yfx_A           79 --DFLMEALIISKF----N-HQN--IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS-QPSSLAML------D-  141 (327)
T ss_dssp             --HHHHHHHHHHHC----C-CTT--BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSS-STTSCCHH------H-
T ss_pred             --HHHHHHHHHhhC----C-CCC--CCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhccccc-ccccccHH------H-
Confidence              112233333222    2 222  3333332  23566999999999999999876432110 00011111      1 


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC---CcEEEEeccccccc
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRM  362 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~---g~l~l~DFGl~~~l  362 (433)
                      + ..+..+++.++.+||+.|++|+|+||.||+++.+   +.++|+|||++..+
T Consensus       142 ~-~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~  193 (327)
T 2yfx_A          142 L-LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI  193 (327)
T ss_dssp             H-HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred             H-HHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence            1 2355678889999999999999999999999844   46999999988644

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=3.8e-17  Score=156.51  Aligned_cols=148  Identities=16%  Similarity=0.128  Sum_probs=96.1

Q ss_pred             cCCccccccccceeEEEEec-CC---CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          160 ISEEPVAAASFGQVYRGSTL-DG---SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-~G---~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ...+.||+|+||.||+|+.. ++   ..||||+........   +...                                
T Consensus        24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~---~~~~--------------------------------   68 (298)
T 3pls_A           24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ---QVEA--------------------------------   68 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHH---HHHH--------------------------------
T ss_pred             ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHH---HHHH--------------------------------
Confidence            34578999999999999853 33   379999886533221   1101                                


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                        +..|...+.    .+.+.+-+.+-.++..-....+++|||+.|++|.+++......       .++..       + .
T Consensus        69 --~~~E~~~l~----~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~-------~~~~~-------~-~  127 (298)
T 3pls_A           69 --FLREGLLMR----GLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN-------PTVKD-------L-I  127 (298)
T ss_dssp             --HHHHHHHHH----TCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCC-------CBHHH-------H-H
T ss_pred             --HHHHHHHHH----hCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccC-------CCHHH-------H-H
Confidence              112222222    2222222222222222223348999999999999998643211       11111       1 2


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       128 ~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          128 SFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            355678889999999999999999999999999999999999997553

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=4.2e-19  Score=174.79  Aligned_cols=149  Identities=20%  Similarity=0.211  Sum_probs=94.8

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+.+...........                           ..      .
T Consensus        12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------------~~------~   58 (346)
T 1ua2_A           12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI---------------------------NR------T   58 (346)
T ss_dssp             -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------------------------------CT------H
T ss_pred             cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhh---------------------------hH------H
Confidence            44557899999999999996 47999999998753221100000                           00      0


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+.+    +. ++  ++++++..  .....++||||++| +|.+++......       +++..        ..
T Consensus        59 ~~~E~~~l~~----l~-h~--~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~-------~~~~~--------~~  115 (346)
T 1ua2_A           59 ALREIKLLQE----LS-HP--NIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLV-------LTPSH--------IK  115 (346)
T ss_dssp             HHHHHHHHHH----CC-CT--TBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSS-------CCSSH--------HH
T ss_pred             HHHHHHHHhh----CC-CC--CCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcC-------CCHHH--------HH
Confidence            1223322222    22 22  23333332  34567999999997 777776543210       11111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       116 ~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A          116 AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             HHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            355667889999999999999999999999999999999999987653

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.69  E-value=1e-16  Score=157.72  Aligned_cols=150  Identities=17%  Similarity=0.163  Sum_probs=94.9

Q ss_pred             cccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          158 SFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       158 ~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      .|...+.||+|++|.||+|+. .+|+.||||+........-. .                                   .
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~-----------------------------------~   61 (351)
T 3mi9_A           18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF-P-----------------------------------I   61 (351)
T ss_dssp             GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSS-C-----------------------------------H
T ss_pred             ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccc-h-----------------------------------H
Confidence            344567899999999999996 68999999987643221100 0                                   0


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc-------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY-------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                      .+..|...+.+    +.+..-+.+-.++..       ..+..++||||++| ++.+.+.....       .+++..    
T Consensus        62 ~~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-------~~~~~~----  125 (351)
T 3mi9_A           62 TALREIKILQL----LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLV-------KFTLSE----  125 (351)
T ss_dssp             HHHHHHHHHHH----CCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTS-------CCCHHH----
T ss_pred             HHHHHHHHHHh----ccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccC-------CCCHHH----
Confidence            01112222222    222221222222211       13456999999997 55555543211       011111    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                          ...+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+.
T Consensus       126 ----~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A          126 ----IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS  175 (351)
T ss_dssp             ----HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             ----HHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence                12356778889999999999999999999999999999999999987653

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.69  E-value=7.5e-18  Score=168.22  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=58.6

Q ss_pred             eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc-cCC
Q 013944          271 RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSG  349 (433)
Q Consensus       271 ~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~-~~g  349 (433)
                      .++||||++| +|.+.+.......    ..+++        .....+..++..+|.+||+.|++|+|+||+||+++ .++
T Consensus       113 ~~lv~e~~~~-~L~~~l~~~~~~~----~~l~~--------~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~  179 (383)
T 3eb0_A          113 LNVIMEYVPD-TLHKVLKSFIRSG----RSIPM--------NLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN  179 (383)
T ss_dssp             EEEEECCCSE-EHHHHHHHHHHTT----CCCCH--------HHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTT
T ss_pred             EEEEEecCCc-cHHHHHHHHHhcC----CCCCH--------HHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCC
Confidence            5799999996 7666654310000    00111        11234667788999999999999999999999997 689


Q ss_pred             cEEEEecccccccC
Q 013944          350 QIGFLDFGLLCRME  363 (433)
Q Consensus       350 ~l~l~DFGl~~~l~  363 (433)
                      .++|+|||++..+.
T Consensus       180 ~~kl~Dfg~a~~~~  193 (383)
T 3eb0_A          180 TLKLCDFGSAKKLI  193 (383)
T ss_dssp             EEEECCCTTCEECC
T ss_pred             cEEEEECCCCcccC
Confidence            99999999998654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.69  E-value=6.8e-17  Score=159.23  Aligned_cols=147  Identities=20%  Similarity=0.273  Sum_probs=93.7

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+........  ...                                  
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~--~~~----------------------------------   69 (353)
T 3coi_A           26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF--AKR----------------------------------   69 (353)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHH--HHH----------------------------------
T ss_pred             EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHH--HHH----------------------------------
Confidence            44567899999999999996 58999999998653321100  000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccC-----CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLS-----RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-----~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      +..|...+.+    +.+.+-+.+-.++....     ...++||||++| +|.+++...          +++..       
T Consensus        70 ~~~E~~~l~~----l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~----------~~~~~-------  127 (353)
T 3coi_A           70 AYRELLLLKH----MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLK----------FSEEK-------  127 (353)
T ss_dssp             HHHHHHHHHH----CCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTTSC----------CCHHH-------
T ss_pred             HHHHHHHHHh----cCCCCcccHhheEecccccccceeEEEEeccccC-CHHHHhcCC----------CCHHH-------
Confidence            1122222222    22222122222222111     234999999985 777665321          11111       


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                       ...+..+++.++.+||+.|++|+|+||+||+++.+|.++|+|||++.....
T Consensus       128 -~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  178 (353)
T 3coi_A          128 -IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA  178 (353)
T ss_dssp             -HHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred             -HHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence             123566788899999999999999999999999999999999999987654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.69  E-value=4.5e-18  Score=166.01  Aligned_cols=188  Identities=15%  Similarity=0.097  Sum_probs=113.0

Q ss_pred             CCccccccccceeEEEEec-CC-----CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL-DG-----SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~-~G-----~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|+||.||+|+.. +|     ..||||+.+.......   ...                               
T Consensus        50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~-------------------------------   95 (333)
T 2i1m_A           50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE---KEA-------------------------------   95 (333)
T ss_dssp             EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHH---HHH-------------------------------
T ss_pred             eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHH---HHH-------------------------------
Confidence            3568999999999999963 33     4899999876532211   111                               


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                         +..|...+.++    ..+++  +++++..  .....++||||++|++|.+++.......................  
T Consensus        96 ---~~~E~~~l~~l----~~h~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~--  164 (333)
T 2i1m_A           96 ---LMSELKIMSHL----GQHEN--IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR--  164 (333)
T ss_dssp             ---HHHHHHHHHHH----CCCTT--BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHH--
T ss_pred             ---HHHHHHHHHhh----cCCCC--eeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHH--
Confidence               12233333222    12222  3334432  33567999999999999999875321000000000000000111  


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH---------------HHHHHHHHHH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------------FAMLASIVHI  377 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------------~~~~~~~~~~  377 (433)
                      ....+..+++.+|.+||+.|++|+|+||+||+++.++.++|+|||++..+.....               +.....-...
T Consensus       165 ~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  244 (333)
T 2i1m_A          165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT  244 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCC
Confidence            1123556788999999999999999999999999999999999999875432110               1111111113


Q ss_pred             HhcCHHHHHHHHHhcC
Q 013944          378 VNGDWQSLVHSLTEMD  393 (433)
Q Consensus       378 ~~~d~~~~~~~l~~~g  393 (433)
                      ...|.++++..+++|-
T Consensus       245 ~~~Di~slG~il~el~  260 (333)
T 2i1m_A          245 VQSDVWSYGILLWEIF  260 (333)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHH
Confidence            3468888888888864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.69  E-value=1.5e-17  Score=159.07  Aligned_cols=175  Identities=19%  Similarity=0.160  Sum_probs=110.6

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ...||+|++|+||+|+. .+|+.||||+.+.......    ..+                                  ..
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----~~~----------------------------------~~   68 (295)
T 2clq_A           27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS----QPL----------------------------------HE   68 (295)
T ss_dssp             BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-------HHH----------------------------------HH
T ss_pred             cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHH----HHH----------------------------------HH
Confidence            34799999999999995 5889999998765422110    001                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+    ..+. ++  .+++++..  .....++||||++|++|.+++....+..     ...+        .....+.
T Consensus        69 e~~~l----~~l~-h~--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-----~~~~--------~~~~~~~  128 (295)
T 2clq_A           69 EIALH----KHLK-HK--NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPL-----KDNE--------QTIGFYT  128 (295)
T ss_dssp             HHHHH----HTCC-CT--TBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCC-----TTCH--------HHHHHHH
T ss_pred             HHHHH----HhCC-CC--CEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCC-----CccH--------HHHHHHH
Confidence            22211    1222 22  23333332  2356799999999999999987542211     0011        1122356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEcc-CCcEEEEecccccccCHHHH-------------HHHHHHH--HHHHhcCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMERKHQ-------------FAMLASI--VHIVNGDW  382 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l~~~~~-------------~~~~~~~--~~~~~~d~  382 (433)
                      .+++.++.+||+.|++|+|++|.||+++. ++.++|+|||++..+.....             +.....-  ......|.
T Consensus       129 ~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di  208 (295)
T 2clq_A          129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADI  208 (295)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHH
T ss_pred             HHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHH
Confidence            67888999999999999999999999987 89999999999876643211             1111100  01234688


Q ss_pred             HHHHHHHHhcCC
Q 013944          383 QSLVHSLTEMDV  394 (433)
Q Consensus       383 ~~~~~~l~~~g~  394 (433)
                      ++++..+++|-.
T Consensus       209 ~slG~il~~l~~  220 (295)
T 2clq_A          209 WSLGCTIIEMAT  220 (295)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            888888777643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.69  E-value=2.8e-17  Score=160.13  Aligned_cols=184  Identities=19%  Similarity=0.120  Sum_probs=110.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEE--EEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIV--AVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~V--AVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      +...+.||+|++|.||+|+. .+|+.+  |||+.+........   .                                 
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~---~---------------------------------   70 (327)
T 1fvr_A           27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH---R---------------------------------   70 (327)
T ss_dssp             CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------C---------------------------------
T ss_pred             ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHH---H---------------------------------
Confidence            33456899999999999996 467655  99987643221100   0                                 


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCC--------CCCCchhhhh
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSV--------DGSSTHLDRQ  305 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~--------~~~~~~~~~~  305 (433)
                       .+..|...+.    .+.++++  +++++..  .....++||||++|++|.+++........        .....+++. 
T Consensus        71 -~~~~E~~~l~----~l~~hp~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-  142 (327)
T 1fvr_A           71 -DFAGELEVLC----KLGHHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ-  142 (327)
T ss_dssp             -HHHHHHHHHT----TCCCCTT--BCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHH-
T ss_pred             -HHHHHHHHHH----hccCCCc--hhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHH-
Confidence             0112222221    2222232  3344332  33567999999999999999864320000        000001111 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH------------HHHHHH
Q 013944          306 KLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ------------FAMLAS  373 (433)
Q Consensus       306 ~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~------------~~~~~~  373 (433)
                             ....+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++........            +.....
T Consensus       143 -------~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  215 (327)
T 1fvr_A          143 -------QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY  215 (327)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhcc
Confidence                   1123566788899999999999999999999999999999999999864321100            111111


Q ss_pred             HHHHHhcCHHHHHHHHHhcC
Q 013944          374 IVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       374 ~~~~~~~d~~~~~~~l~~~g  393 (433)
                      -......|.|+++..+++|-
T Consensus       216 ~~~~~~~Di~slG~il~ell  235 (327)
T 1fvr_A          216 SVYTTNSDVWSYGVLLWEIV  235 (327)
T ss_dssp             CEECHHHHHHHHHHHHHHHH
T ss_pred             ccCCchhcchHHHHHHHHHH
Confidence            01123458888888888763

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.69  E-value=1.2e-16  Score=157.04  Aligned_cols=143  Identities=19%  Similarity=0.220  Sum_probs=96.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+.++........+                                     +.
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~-------------------------------------~~   57 (353)
T 2b9h_A           15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR-------------------------------------TL   57 (353)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHH-------------------------------------HH
T ss_pred             EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHH-------------------------------------HH
Confidence            456899999999999996 4799999999876432211100                                     11


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc-------CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL-------SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-------~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      .|...+.+    +.+ +  .+++++...       ....++||||++| +|.+++... ..+        +..       
T Consensus        58 ~E~~~l~~----l~h-~--~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~--------~~~-------  113 (353)
T 2b9h_A           58 REIKILKH----FKH-E--NIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQ-MLS--------DDH-------  113 (353)
T ss_dssp             HHHHHHHH----CCC-T--TBCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHHHHHC-CCC--------HHH-------
T ss_pred             HHHHHHHh----CcC-C--CcCCeeeeecccccCccceEEEEEeccCc-cHHHHHhhc-CCC--------HHH-------
Confidence            23222222    222 2  223333211       2557999999985 787776532 111        111       


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                       ...+..+++.+|.+||+.|++|+|+||+||+++.+|.++|+|||++..+...
T Consensus       114 -~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (353)
T 2b9h_A          114 -IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES  165 (353)
T ss_dssp             -HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             -HHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence             1235667888999999999999999999999999999999999999887643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.68  E-value=7.8e-17  Score=156.32  Aligned_cols=151  Identities=16%  Similarity=0.165  Sum_probs=98.4

Q ss_pred             cCCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          160 ISEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      ...+.||+|++|.||+|+..      +++.||||+.+........   .                               
T Consensus        28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~---~-------------------------------   73 (322)
T 1p4o_A           28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER---I-------------------------------   73 (322)
T ss_dssp             EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHH---H-------------------------------
T ss_pred             eeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHH---H-------------------------------
Confidence            34568999999999999853      4789999998754322100   0                               


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCC--CCCCCchhhhhhhHH
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSS--VDGSSTHLDRQKLDA  309 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~--~~~~~~~~~~~~~~~  309 (433)
                         .+.+|...+.+    +. ++  ++++++..  .....++||||++|++|.+++.......  .......+      .
T Consensus        74 ---~~~~E~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~------~  137 (322)
T 1p4o_A           74 ---EFLNEASVMKE----FN-CH--HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS------L  137 (322)
T ss_dssp             ---HHHHHHHHGGG----CC-CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCC------H
T ss_pred             ---HHHHHHHHHHh----cC-CC--CEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcC------H
Confidence               01223222221    22 22  23444433  2356799999999999999986432100  00000001      1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      . .+ ..+..+++.++.+||+.|++|+|+||+||+++.+|.++|+|||++..+
T Consensus       138 ~-~~-~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~  188 (322)
T 1p4o_A          138 S-KM-IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI  188 (322)
T ss_dssp             H-HH-HHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred             H-HH-HHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccc
Confidence            1 11 235567888999999999999999999999999999999999998754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.68  E-value=2.4e-17  Score=161.02  Aligned_cols=82  Identities=15%  Similarity=0.090  Sum_probs=60.6

Q ss_pred             CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC
Q 013944          269 RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS  348 (433)
Q Consensus       269 ~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~  348 (433)
                      ...+++|||+++++|.+++....+.       +++..        ...+..++..+|.+||+.|++|+|+||+||+++.+
T Consensus        89 ~~~~~v~~~~~~g~L~~~l~~~~~~-------~~~~~--------~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~  153 (327)
T 3lzb_A           89 STVQLITQLMPFGCLLDYVREHKDN-------IGSQY--------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP  153 (327)
T ss_dssp             SSEEEEECCCSSCBHHHHHHHTTTC-------CCHHH--------HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET
T ss_pred             CCceEEEEecCCCcHHHHHHhcCCC-------CCHHH--------HHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC
Confidence            4578999999999999988753221       11111        12355678889999999999999999999999999


Q ss_pred             CcEEEEecccccccCHH
Q 013944          349 GQIGFLDFGLLCRMERK  365 (433)
Q Consensus       349 g~l~l~DFGl~~~l~~~  365 (433)
                      |.++|+|||++..+...
T Consensus       154 ~~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A          154 QHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             TEEEECCTTC-------
T ss_pred             CCEEEccCcceeEccCc
Confidence            99999999999876543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.68  E-value=4.6e-16  Score=152.01  Aligned_cols=170  Identities=18%  Similarity=0.186  Sum_probs=110.8

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|++|.||+|+. +|+.||||+.++........+..+++                                  
T Consensus        45 ~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~----------------------------------   89 (342)
T 1b6c_B           45 VLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQ----------------------------------   89 (342)
T ss_dssp             EEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHH----------------------------------
T ss_pred             EEEeeecCCCCcEEEEEEE-cCccEEEEEeCchhHHHHHHHHHHHH----------------------------------
Confidence            3467899999999999987 69999999986543222221111111                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                             .   ..-.+++  +++++..+.      ...++||||++|++|.+++... ..        ++..       .
T Consensus        90 -------~---~~l~h~n--i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~--------~~~~-------~  141 (342)
T 1b6c_B           90 -------T---VMLRHEN--ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY-TV--------TVEG-------M  141 (342)
T ss_dssp             -------H---SCCCCTT--BCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC-CB--------CHHH-------H
T ss_pred             -------H---hhcCCCc--EEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc-Cc--------cHHH-------H
Confidence                   1   1011222  233332211      2579999999999999998642 11        1111       1


Q ss_pred             HHHHHHHHHHHHHHHH--------HCCccccCCCCCceEEccCCcEEEEecccccccCHHHH-----------------H
Q 013944          314 LDLVNKGVEATLVQLL--------ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ-----------------F  368 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh--------~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~-----------------~  368 (433)
                       ..+..+++.++.+||        +.|++|+|+||+||+++.+++++|+|||++........                 +
T Consensus       142 -~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aP  220 (342)
T 1b6c_B          142 -IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP  220 (342)
T ss_dssp             -HHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCH
T ss_pred             -HHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCH
Confidence             125567888999999        89999999999999999999999999999865432110                 1


Q ss_pred             HHHHH------HHHHHhcCHHHHHHHHHhcC
Q 013944          369 AMLAS------IVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       369 ~~~~~------~~~~~~~d~~~~~~~l~~~g  393 (433)
                      .....      .......|.|+++..+++|-
T Consensus       221 E~~~~~~~~~~~~~~~~~Di~slG~il~el~  251 (342)
T 1b6c_B          221 EVLDDSINMKHFESFKRADIYAMGLVFWEIA  251 (342)
T ss_dssp             HHHTSCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcccccccccccCCcccHHHHHHHHHHHH
Confidence            11100      01124568999998888874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.68  E-value=4.3e-17  Score=162.67  Aligned_cols=148  Identities=20%  Similarity=0.245  Sum_probs=95.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+.+.....  .   ...                                  .
T Consensus        58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~---~~~----------------------------------~   98 (382)
T 2vx3_A           58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF--L---NQA----------------------------------Q   98 (382)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHH--H---HHH----------------------------------H
T ss_pred             EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHH--H---HHH----------------------------------H
Confidence            356899999999999996 47899999998753211  0   000                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|.+.+..+.. ........++.++..  .....+|||||++| +|.+++.......      .++.        ....+
T Consensus        99 ~e~~~l~~l~~-~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~------~~~~--------~~~~i  162 (382)
T 2vx3_A           99 IEVRLLELMNK-HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRG------VSLN--------LTRKF  162 (382)
T ss_dssp             HHHHHHHHHHH-CSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSC------CCHH--------HHHHH
T ss_pred             HHHHHHHHHHh-cccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCC------CCHH--------HHHHH
Confidence            12222222221 111111223333332  24667999999976 8888886542110      1111        11235


Q ss_pred             HHHHHHHHHHHH--HCCccccCCCCCceEEc--cCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLL--ETGILHADPHPGNLRYT--SSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh--~~givH~DlhpgNilv~--~~g~l~l~DFGl~~~l~  363 (433)
                      ..+++.++.+||  ..|++|+|+||+||+++  .++.++|+|||++..+.
T Consensus       163 ~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~  212 (382)
T 2vx3_A          163 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG  212 (382)
T ss_dssp             HHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             HHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence            677888999999  57999999999999995  46889999999997654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.68  E-value=8.8e-17  Score=159.83  Aligned_cols=191  Identities=17%  Similarity=0.192  Sum_probs=109.1

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+........  ...                                  
T Consensus        44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~--~~~----------------------------------   87 (371)
T 4exu_A           44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF--AKR----------------------------------   87 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHH--HHH----------------------------------
T ss_pred             EEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhH--HHH----------------------------------
Confidence            33456899999999999995 58999999988754322110  000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCC-----ceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSR-----KRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-----~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      +..|...+..    +.+.+-+.+-.++.....     ..++||||++| +|.+.+...  .        ++..       
T Consensus        88 ~~~E~~~l~~----l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~--~--------~~~~-------  145 (371)
T 4exu_A           88 AYRELLLLKH----MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGME--F--------SEEK-------  145 (371)
T ss_dssp             HHHHHHHHHH----CCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHTTSC--C--------CHHH-------
T ss_pred             HHHHHHHHHh----cCCCCchhhhhheeccCCcccceeEEEEEccccc-cHHHHhhcC--C--------CHHH-------
Confidence            0112222222    222222222222221111     23999999985 666655311  1        1111       


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHH-HHh
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHS-LTE  391 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~-l~~  391 (433)
                       ...+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++.........         ..+....++.. +..
T Consensus       146 -~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~---------~~~t~~y~aPE~~~~  215 (371)
T 4exu_A          146 -IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG---------YVVTRWYRAPEVILS  215 (371)
T ss_dssp             -HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------C---------TTCCCTTSCHHHHSC
T ss_pred             -HHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCC---------cccCccccCHHHhcC
Confidence             1235667888999999999999999999999999999999999999866543211         01111122222 222


Q ss_pred             cCCCCCCCChHHHHHHHHHHh-hchhc
Q 013944          392 MDVVRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       392 ~g~~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      ........|+++++..+.+++ |..+|
T Consensus       216 ~~~~~~~~DiwslG~il~el~~g~~pf  242 (371)
T 4exu_A          216 WMHYNQTVDIWSVGCIMAEMLTGKTLF  242 (371)
T ss_dssp             CSCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCCCCcHHhHHHHHHHHHHHHhCCCCC
Confidence            234455667777776666665 34333

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.68  E-value=4.2e-17  Score=161.58  Aligned_cols=147  Identities=17%  Similarity=0.196  Sum_probs=97.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.++........   .                                  
T Consensus        29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~---~----------------------------------   71 (364)
T 3qyz_A           29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ---R----------------------------------   71 (364)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHH---H----------------------------------
T ss_pred             EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHH---H----------------------------------
Confidence            44467899999999999995 588999999987643221110   0                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      +..|.+.+.++    .+..-+.+-.++..    .....++||||++| +|.+++... ..+        +..        
T Consensus        72 ~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~~-~~~--------~~~--------  129 (364)
T 3qyz_A           72 TLREIKILLRF----RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ-HLS--------NDH--------  129 (364)
T ss_dssp             HHHHHHHHHHC----CCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHHC-CCC--------HHH--------
T ss_pred             HHHHHHHHHhc----CCCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHHhC-CCC--------HHH--------
Confidence            11233322222    22221222222211    11356999999986 788777532 111        111        


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ...+..+++.+|.+||+.|++|+|+||+||+++.+|.++|+|||++.....
T Consensus       130 ~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  180 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence            123566788899999999999999999999999999999999999876643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.68  E-value=3e-17  Score=157.87  Aligned_cols=148  Identities=18%  Similarity=0.159  Sum_probs=95.8

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+.........+.                                  -.
T Consensus         7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~----------------------------------~~   52 (305)
T 2wtk_C            7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGE----------------------------------AN   52 (305)
T ss_dssp             BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHH----------------------------------HH
T ss_pred             eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhH----------------------------------HH
Confidence            55677999999999999996 58899999998632111000000                                  01


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      +..|...+.+    +.+   -.+.+++..    .....++||||++|+ +.+++.......      +++..        
T Consensus        53 ~~~E~~~l~~----l~h---~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~------~~~~~--------  110 (305)
T 2wtk_C           53 VKKEIQLLRR----LRH---KNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKR------FPVCQ--------  110 (305)
T ss_dssp             HHHHHHHHTT----CCC---TTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCS------CCHHH--------
T ss_pred             HHHHHHHHHh----cCC---CCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccc------cCHHH--------
Confidence            1223332222    222   223333332    234679999999987 666655322111      11111        


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ...+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+
T Consensus       111 ~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C          111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence            1235567888999999999999999999999999999999999998765

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.68  E-value=1.5e-16  Score=153.97  Aligned_cols=147  Identities=14%  Similarity=0.189  Sum_probs=96.8

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|++|.||+|+..+|+.||||+.+......  .....+                                  .
T Consensus        31 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~----------------------------------~   74 (313)
T 3cek_A           31 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN--QTLDSY----------------------------------R   74 (313)
T ss_dssp             EEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCH--HHHHHH----------------------------------H
T ss_pred             EEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccc--cchHHH----------------------------------H
Confidence            3456899999999999998889999999986532211  011111                                  2


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|...+.++...   .+  .+.+++.  ......++||| +.|++|.+++......+        +..        ...+
T Consensus        75 ~E~~~l~~l~~~---~~--~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~--------~~~--------~~~i  132 (313)
T 3cek_A           75 NEIAYLNKLQQH---SD--KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSID--------PWE--------RKSY  132 (313)
T ss_dssp             HHHHHHHHHGGG---CT--TBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCC--------HHH--------HHHH
T ss_pred             HHHHHHHhcccc---CC--ceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCC--------HHH--------HHHH
Confidence            233333333211   12  1233332  22356799999 66789999887543322        111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..++..+|.+||+.|++|+|+||+||+++ +|.++|+|||++..+...
T Consensus       133 ~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~  179 (313)
T 3cek_A          133 WKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  179 (313)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC----
T ss_pred             HHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCc
Confidence            56788899999999999999999999995 599999999999877543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.67  E-value=5.3e-17  Score=154.89  Aligned_cols=149  Identities=17%  Similarity=0.134  Sum_probs=100.9

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+.+.............++                               .+.
T Consensus        23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~-------------------------------~~~   71 (287)
T 4f0f_A           23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ-------------------------------EFQ   71 (287)
T ss_dssp             EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSH-------------------------------HHH
T ss_pred             ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHH-------------------------------HHH
Confidence            456899999999999996 589999999987543221100000000                               012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      .|...+.+    +   .+-++++++..+.+..++||||++|++|.+.+......       .++..        ...+..
T Consensus        72 ~E~~~l~~----l---~h~~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~--------~~~~~~  129 (287)
T 4f0f_A           72 REVFIMSN----L---NHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHP-------IKWSV--------KLRLML  129 (287)
T ss_dssp             HHHHHHTT----C---CCTTBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSC-------CCHHH--------HHHHHH
T ss_pred             HHHHHHHh----C---CCCCchhhheeecCCCeEEEEecCCCCHHHHHhcccCC-------ccHHH--------HHHHHH
Confidence            23222221    2   23345666666667779999999999998877543210       11111        123556


Q ss_pred             HHHHHHHHHHHCC--ccccCCCCCceEEccCCc-----EEEEeccccccc
Q 013944          320 GVEATLVQLLETG--ILHADPHPGNLRYTSSGQ-----IGFLDFGLLCRM  362 (433)
Q Consensus       320 ~i~~~l~~lh~~g--ivH~DlhpgNilv~~~g~-----l~l~DFGl~~~l  362 (433)
                      ++..++.+||+.|  ++|+|+||+||+++.++.     ++|+|||++...
T Consensus       130 ~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~  179 (287)
T 4f0f_A          130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS  179 (287)
T ss_dssp             HHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCC
T ss_pred             HHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccc
Confidence            7888999999999  999999999999988876     999999988644

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.67  E-value=1.5e-16  Score=150.69  Aligned_cols=144  Identities=20%  Similarity=0.203  Sum_probs=98.2

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|+||+|+. .+|+.||||+.+........   ..                                  
T Consensus         9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---~~----------------------------------   51 (276)
T 2yex_A            9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---EN----------------------------------   51 (276)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHH---HH----------------------------------
T ss_pred             eEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhh---HH----------------------------------
Confidence            33456899999999999996 48999999997643211100   00                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +..|...+    ..+. ++  .+++++..  .....++||||++|++|.+++......+        +..        ..
T Consensus        52 ~~~e~~~l----~~l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~  108 (276)
T 2yex_A           52 IKKEICIN----KMLN-HE--NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP--------EPD--------AQ  108 (276)
T ss_dssp             HHHHHHHH----HTCC-CT--TBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCC--------HHH--------HH
T ss_pred             HHHHHHHH----HhcC-CC--CceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCC--------HHH--------HH
Confidence            11122222    1222 22  23444433  2356689999999999999876432221        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+
T Consensus       109 ~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  155 (276)
T 2yex_A          109 RFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF  155 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence            35567888999999999999999999999999999999999998643

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.67  E-value=1.7e-17  Score=167.95  Aligned_cols=147  Identities=20%  Similarity=0.252  Sum_probs=91.6

Q ss_pred             cccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          158 SFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       158 ~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      .|...+.||+|+||.||+|+. .+|+.||||+...+... ..+++.+++                               
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~E~~il~-------------------------------  102 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-KNRELQIMR-------------------------------  102 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS-CCHHHHHHH-------------------------------
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh-HHHHHHHHH-------------------------------
Confidence            355567899999999999997 47999999987643221 112222222                               


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc---C--CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL---S--RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~--~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                                    .+.+.+-+.+-.++...   .  ...++||||++| .+.+.+.......    ..+++        
T Consensus       103 --------------~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~----~~l~~--------  155 (420)
T 1j1b_A          103 --------------KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK----QTLPV--------  155 (420)
T ss_dssp             --------------TCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTT----CCCCH--------
T ss_pred             --------------HcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhcc----CCCCH--------
Confidence                          12222212222222111   1  124789999997 4544443210000    00111        


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccC-CcEEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l~  363 (433)
                      .....+..++..+|.|||+.|++|+|+||+|||++.+ +.++|+|||+++.+.
T Consensus       156 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~  208 (420)
T 1j1b_A          156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  208 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence            1122356778899999999999999999999999965 578999999998654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.67  E-value=1e-17  Score=164.30  Aligned_cols=167  Identities=14%  Similarity=0.096  Sum_probs=97.8

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      |...+.||+|++|.||+|+. +|+.||||+.+...........   +        ............          -.+
T Consensus        33 y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~----------~~~   90 (348)
T 2pml_X           33 YRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFT---K--------SNNDKISIKSKY----------DDF   90 (348)
T ss_dssp             EEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEEC---C--------CSSSSCCEEEHH----------HHH
T ss_pred             eEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhc---c--------ccchhhhHHhHH----------HHH
Confidence            33456899999999999998 9999999987632111000000   0        000000000000          011


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.+    +. +++  +++++.  ......++||||++|++|.+++..............++..        ...
T Consensus        91 ~~E~~~l~~----l~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~--------~~~  155 (348)
T 2pml_X           91 KNELQIITD----IK-NEY--CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV--------IKC  155 (348)
T ss_dssp             HHHHHHHTT----CC-CTT--BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHH--------HHH
T ss_pred             HHHHHHHHh----CC-CCC--cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHH--------HHH
Confidence            223333222    22 222  233332  2335679999999999999983211100000001111111        123


Q ss_pred             HHHHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++..++.+||+ .|++|+|+||+||+++.++.++|+|||++..+
T Consensus       156 i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  202 (348)
T 2pml_X          156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM  202 (348)
T ss_dssp             HHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEecccccccc
Confidence            56678889999999 99999999999999999999999999998764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.66  E-value=7.2e-17  Score=164.01  Aligned_cols=144  Identities=19%  Similarity=0.223  Sum_probs=94.8

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +...+.||+|++|+|+.....+|+.||||+..+.......+++.+++                                 
T Consensus        26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~---------------------------------   72 (432)
T 3p23_A           26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLR---------------------------------   72 (432)
T ss_dssp             EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHH---------------------------------
T ss_pred             EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHH---------------------------------
Confidence            33456899999999765545689999999987654443333443333                                 


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                                  .+..+++  |.+++..  .....+|||||++| +|.+++.......       .+...        ..
T Consensus        73 ------------~l~~Hpn--Iv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~-------~~~~~--------~~  122 (432)
T 3p23_A           73 ------------ESDEHPN--VIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAH-------LGLEP--------IT  122 (432)
T ss_dssp             ------------HSCCCTT--BCCEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCC-------CSSCH--------HH
T ss_pred             ------------hccCCCC--cCeEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCc-------cchhH--------HH
Confidence                        1112222  2333322  23456999999985 8888886543211       00111        12


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEcc---C--CcEEEEecccccccCHH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTS---S--GQIGFLDFGLLCRMERK  365 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~---~--g~l~l~DFGl~~~l~~~  365 (433)
                      +..++..+|.+||+.|++|+|+||+||+++.   +  .+++|+|||++..+...
T Consensus       123 i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~  176 (432)
T 3p23_A          123 LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG  176 (432)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred             HHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence            4567888999999999999999999999953   2  36889999999887643

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.66  E-value=9.6e-17  Score=155.01  Aligned_cols=146  Identities=17%  Similarity=0.151  Sum_probs=88.9

Q ss_pred             ccCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|++|.||+|+.. +|+.||||+....-....    ..+                                 
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~---------------------------------   55 (320)
T 2i6l_A           13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSV----KHA---------------------------------   55 (320)
T ss_dssp             EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHH----HHH---------------------------------
T ss_pred             eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHH----HHH---------------------------------
Confidence            334578999999999999964 699999998765432211    011                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeec-------------ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhh
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFR-------------YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDR  304 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~-------------~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~  304 (433)
                       ..|...+.    .+.+.+-+.+-.++.             ......++||||++| +|.+++... ..        ++.
T Consensus        56 -~~e~~~l~----~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~--------~~~  120 (320)
T 2i6l_A           56 -LREIKIIR----RLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQG-PL--------LEE  120 (320)
T ss_dssp             -HHHHHHHH----TCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSE-EHHHHHTTC-CC--------CHH
T ss_pred             -HHHHHHHH----hcCCCCeeEEEEeccccccccccccccccccCceeEEeeccCC-CHHHHhhcC-Cc--------cHH
Confidence             11222221    122211111111111             112456899999985 888887532 11        111


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc-cCCcEEEEecccccccCH
Q 013944          305 QKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       305 ~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~-~~g~l~l~DFGl~~~l~~  364 (433)
                      .        ...+..++..++.+||+.|++|+|+||+||+++ .++.++|+|||++..+..
T Consensus       121 ~--------~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~  173 (320)
T 2i6l_A          121 H--------ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP  173 (320)
T ss_dssp             H--------HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--
T ss_pred             H--------HHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCC
Confidence            1        123566788899999999999999999999997 567999999999987654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.66  E-value=1.7e-16  Score=155.54  Aligned_cols=149  Identities=16%  Similarity=0.120  Sum_probs=94.6

Q ss_pred             cCCccccccccceeEEEEe-cCC-CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDG-SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G-~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ...+.||+|++|.||+|+. .+| +.||||+.+.....     ...+                                 
T Consensus        22 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-----~~~~---------------------------------   63 (355)
T 2eu9_A           22 EIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY-----REAA---------------------------------   63 (355)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHH-----HHHH---------------------------------
T ss_pred             EEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccc-----hhHH---------------------------------
Confidence            3456899999999999996 344 78999998753211     0011                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       ..|...+.++..... .....+...+.  ......++||||+. +++.+.+.......      +++..        ..
T Consensus        64 -~~E~~~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~------~~~~~--------~~  126 (355)
T 2eu9_A           64 -RLEINVLKKIKEKDK-ENKFLCVLMSDWFNFHGHMCIAFELLG-KNTFEFLKENNFQP------YPLPH--------VR  126 (355)
T ss_dssp             -HHHHHHHHHHHHHCT-TSCSCBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTCC------CCHHH--------HH
T ss_pred             -HHHHHHHHHHhhcCC-CCceeEEEeeeeeeeCCeEEEEEeccC-CChHHHHHhccCCC------CCHHH--------HH
Confidence             223333333332211 11222333332  23467799999995 55555554332111      11111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEE-------------------ccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRY-------------------TSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv-------------------~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..+++.+|.+||+.|++|+|+||+||++                   +.++.++|+|||++....
T Consensus       127 ~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~  193 (355)
T 2eu9_A          127 HMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH  193 (355)
T ss_dssp             HHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETT
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccc
Confidence            356678899999999999999999999999                   567899999999987543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.66  E-value=8.2e-17  Score=156.63  Aligned_cols=219  Identities=17%  Similarity=0.116  Sum_probs=129.3

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.+........                                .+..+-.+
T Consensus        46 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------~~~~~~~~   93 (320)
T 3a99_A           46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--------------------------------ELPNGTRV   93 (320)
T ss_dssp             EEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEE--------------------------------ECTTCCEE
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhh--------------------------------hhhhhhHH
Confidence            3456899999999999985 58999999987643211000                                00000112


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCC-CCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVG-ESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      ..|...+.++..     .+..+++++..  .....+++||++.+ ++|.+++......+        +.        ...
T Consensus        94 ~~E~~~l~~l~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~--------~~--------~~~  152 (320)
T 3a99_A           94 PMEVVLLKKVSS-----GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ--------EE--------LAR  152 (320)
T ss_dssp             EHHHHHHHHHCS-----SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCC--------HH--------HHH
T ss_pred             HHHHHHHHhhcc-----CCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCC--------HH--------HHH
Confidence            233333333321     11223344433  23567999999986 88998886543322        11        112


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEc-cCCcEEEEecccccccCHHHH-----------HHHHHHHH-HHHhcCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRMERKHQ-----------FAMLASIV-HIVNGDW  382 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~-~~g~l~l~DFGl~~~l~~~~~-----------~~~~~~~~-~~~~~d~  382 (433)
                      .+..++..+|.+||+.|++|+|+||+||+++ .++.++|+|||++..+.....           ......-. .....|.
T Consensus       153 ~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di  232 (320)
T 3a99_A          153 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV  232 (320)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchH
Confidence            3556788899999999999999999999998 679999999999876532110           11111000 1234588


Q ss_pred             HHHHHHHHhcCCCCCCCCh-H-----------HHHHHHHHHhhchhccCCCCCcccccccc
Q 013944          383 QSLVHSLTEMDVVRPGTNT-L-----------RVTMDLEDALGEVEFKDGIPDVKFSRVRS  431 (433)
Q Consensus       383 ~~~~~~l~~~g~~~~~~d~-~-----------~~~~~l~~~l~~~~~~~~~~~~~~~~~l~  431 (433)
                      |+++..+++|-......+. .           .+..++.+++...+..+|-.+.++.+++.
T Consensus       233 ~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          233 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            8888888876433222111 1           11124455555555445555566665543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=3e-16  Score=149.85  Aligned_cols=142  Identities=18%  Similarity=0.189  Sum_probs=97.6

Q ss_pred             CccccccccceeEEEEec---CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          162 EEPVAAASFGQVYRGSTL---DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~---~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      .+.||+|++|+||+|+..   +|+.||||+.++.....   +...+                                  
T Consensus        15 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~----------------------------------   57 (287)
T 1u59_A           15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---DTEEM----------------------------------   57 (287)
T ss_dssp             EEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---HHHHH----------------------------------
T ss_pred             hccccccCceeEEEeEeccCCCcceEEEEecCCccchh---HHHHH----------------------------------
Confidence            448999999999999853   68899999988653221   11111                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      ..|...+.+    +. +++  +++++.. .....++||||++|++|.+++.....       .+++..        ...+
T Consensus        58 ~~E~~~l~~----l~-h~~--i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-------~~~~~~--------~~~~  115 (287)
T 1u59_A           58 MREAQIMHQ----LD-NPY--IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE-------EIPVSN--------VAEL  115 (287)
T ss_dssp             HHHHHHHHH----CC-CTT--BCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTT-------TSCHHH--------HHHH
T ss_pred             HHHHHHHHh----CC-CCC--EeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCc-------cCCHHH--------HHHH
Confidence            223332222    22 222  3333332 23557999999999999998863321       011111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+
T Consensus       116 ~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A          116 LHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            667888999999999999999999999999999999999998755

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.66  E-value=2.3e-16  Score=153.45  Aligned_cols=148  Identities=15%  Similarity=0.116  Sum_probs=96.6

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+..........    .                                  
T Consensus        30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~----~----------------------------------   71 (337)
T 3ll6_A           30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR----A----------------------------------   71 (337)
T ss_dssp             EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHH----H----------------------------------
T ss_pred             EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHH----H----------------------------------
Confidence            33456899999999999995 58999999987544222110    0                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc----------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhh
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY----------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKL  307 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~  307 (433)
                      +..|...+.++.    ++++  +.+++..          .....+++|||++ ++|.+++.......     .+++..  
T Consensus        72 ~~~e~~~l~~l~----~h~~--iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~-----~~~~~~--  137 (337)
T 3ll6_A           72 IIQEVCFMKKLS----GHPN--IVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRG-----PLSCDT--  137 (337)
T ss_dssp             HHHHHHHHHHHT----TSTT--BCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTC-----SCCHHH--
T ss_pred             HHHHHHHHHHhc----cCCC--hhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccC-----CCCHHH--
Confidence            112333332221    1222  2222221          1234689999997 57877775421100     011111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETG--ILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~g--ivH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                            ...+..+++.+|.+||..|  ++|+|+||.||+++.++.++|+|||++..+..
T Consensus       138 ------~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  190 (337)
T 3ll6_A          138 ------VLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH  190 (337)
T ss_dssp             ------HHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSS
T ss_pred             ------HHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccc
Confidence                  1235567888999999999  99999999999999999999999999987653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.66  E-value=1.5e-16  Score=149.89  Aligned_cols=145  Identities=12%  Similarity=0.040  Sum_probs=97.0

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +...+.||+|++|.||+|+. +|+.||||+.+......-  +...                                  +
T Consensus        12 y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~--~~~~----------------------------------~   54 (271)
T 3kmu_A           12 LNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTR--KSRD----------------------------------F   54 (271)
T ss_dssp             CEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHH--HHHH----------------------------------H
T ss_pred             hHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHH--HHHH----------------------------------H
Confidence            33457899999999999997 589999999876432110  0000                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccC----CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLS----RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      ..|...       +....+-++.+++..+.    ...++||||++|++|.+++.......      +++...        
T Consensus        55 ~~E~~~-------l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~------~~~~~~--------  113 (271)
T 3kmu_A           55 NEECPR-------LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV------VDQSQA--------  113 (271)
T ss_dssp             HHHGGG-------GCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCC------CCHHHH--------
T ss_pred             HHHHHH-------HHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCC------CCHHHH--------
Confidence            112211       11112223344443322    45699999999999999997543211      111111        


Q ss_pred             HHHHHHHHHHHHHHHHCC--ccccCCCCCceEEccCCcEEEEecccccc
Q 013944          315 DLVNKGVEATLVQLLETG--ILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~g--ivH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      ..+..+++.++.+||+.|  ++|+|+||.||+++.+|.+++.|||+...
T Consensus       114 ~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A          114 VKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             HHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             HHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence            235667888999999999  99999999999999999999998887644

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.66  E-value=5.5e-17  Score=162.80  Aligned_cols=146  Identities=21%  Similarity=0.233  Sum_probs=90.9

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      |...+.||+|+||.||+|+..++..||+|........ ..+++.+++                                 
T Consensus        42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-~~~E~~il~---------------------------------   87 (394)
T 4e7w_A           42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-KNRELQIMR---------------------------------   87 (394)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-CCHHHHHHH---------------------------------
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-HHHHHHHHH---------------------------------
Confidence            4456789999999999999876667999976543211 112222222                                 


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccC-----CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLS-----RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-----~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                                  .+.+.+-+.+-.++....     ...++||||++|+.+..........     ...++        ..
T Consensus        88 ------------~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~-----~~~~~--------~~  142 (394)
T 4e7w_A           88 ------------IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLK-----QTMPM--------LL  142 (394)
T ss_dssp             ------------TCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTT-----SCCCH--------HH
T ss_pred             ------------hCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhc-----CCCCH--------HH
Confidence                        122211122222221111     1157999999975443332211000     00111        11


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEc-cCCcEEEEecccccccC
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYT-SSGQIGFLDFGLLCRME  363 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~-~~g~l~l~DFGl~~~l~  363 (433)
                      ...+..++..+|.|||+.|++|+|+||+||+++ .+|.++|+|||+++.+.
T Consensus       143 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~  193 (394)
T 4e7w_A          143 IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI  193 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence            234667788999999999999999999999998 78999999999997653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.66  E-value=4.4e-17  Score=155.51  Aligned_cols=177  Identities=21%  Similarity=0.185  Sum_probs=103.5

Q ss_pred             cCCccccccccceeEEEEec--CCC--EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          160 ISEEPVAAASFGQVYRGSTL--DGS--IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~--~G~--~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ...+.||+|++|+||+|+..  +|+  .||||+.++.....-. ...                                 
T Consensus        21 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~~---------------------------------   66 (291)
T 1u46_A           21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMD---------------------------------   66 (291)
T ss_dssp             EEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CH-HHH---------------------------------
T ss_pred             eeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHH-HHH---------------------------------
Confidence            34568999999999999852  343  6999998764321100 000                                 


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                       ++..|.+.+.++    . ++  .+++++.. .....++||||++|++|.+++....+.       +++.        ..
T Consensus        67 -~~~~e~~~l~~l----~-h~--~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~-------~~~~--------~~  123 (291)
T 1u46_A           67 -DFIREVNAMHSL----D-HR--NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-------FLLG--------TL  123 (291)
T ss_dssp             -HHHHHHHHHHHC----C-CT--TBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGG-------SCHH--------HH
T ss_pred             -HHHHHHHHHHhC----C-CC--CcccEEEEEccCCceeeEecccCCCHHHHHHhccCC-------cCHH--------HH
Confidence             112233333222    2 22  23333332 234578999999999999988643210       1111        11


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH----------------HHHHHHHHHHH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ----------------FAMLASIVHIV  378 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~----------------~~~~~~~~~~~  378 (433)
                      ..+..++..++.+||+.|++|+|+||+||+++.++.++|+|||++..+.....                +.....-....
T Consensus       124 ~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  203 (291)
T 1u46_A          124 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSH  203 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEH
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCc
Confidence            23556788899999999999999999999999999999999999876533210                01111000123


Q ss_pred             hcCHHHHHHHHHhcC
Q 013944          379 NGDWQSLVHSLTEMD  393 (433)
Q Consensus       379 ~~d~~~~~~~l~~~g  393 (433)
                      ..|.|+++..+++|-
T Consensus       204 ~~Di~slG~il~~l~  218 (291)
T 1u46_A          204 ASDTWMFGVTLWEMF  218 (291)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHH
Confidence            458888888888763

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.66  E-value=7.1e-17  Score=159.07  Aligned_cols=149  Identities=18%  Similarity=0.203  Sum_probs=81.3

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+...+.... ..++..+                                 
T Consensus        25 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~---------------------------------   70 (360)
T 3e3p_A           25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-NRELQIM---------------------------------   70 (360)
T ss_dssp             EEEC----------CEEEEETTTCCEEEEEEEECCTTCC-CHHHHHH---------------------------------
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc-HHHHHHH---------------------------------
Confidence            44567899999999999996 579999999875432110 0111111                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCCCcchhhhh-ccCCCCCCCCchhhhhhhHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGESPTDLISL-STGSSVDGSSTHLDRQKLDAK  310 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~~L~~~l~~-~~~~~~~~~~~~~~~~~~~~~  310 (433)
                           +.+..    +.+.+-+.+-.++....      ...++||||++|+ +.+.+.. ....     ...++       
T Consensus        71 -----~~l~~----l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~-----~~~~~-------  128 (360)
T 3e3p_A           71 -----QDLAV----LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQ-----VAPPP-------  128 (360)
T ss_dssp             -----HHHHH----HCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCB-HHHHHHHHHTTT-----CCCCH-------
T ss_pred             -----HHHHh----cCCCCcccHHHhhhccccccccceeEEEEeeccccc-HHHHHHHHhhcc-----cCCCH-------
Confidence                 11111    11111122222221111      1158999999974 3333221 1100     00011       


Q ss_pred             HHHHHHHHHHHHHHHHHHH--HCCccccCCCCCceEEcc-CCcEEEEecccccccCH
Q 013944          311 WRLLDLVNKGVEATLVQLL--ETGILHADPHPGNLRYTS-SGQIGFLDFGLLCRMER  364 (433)
Q Consensus       311 ~~l~~l~~~~i~~~l~~lh--~~givH~DlhpgNilv~~-~g~l~l~DFGl~~~l~~  364 (433)
                       .....+..++..++.++|  ..|++|+|+||+||+++. ++.++|+|||++..+..
T Consensus       129 -~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~  184 (360)
T 3e3p_A          129 -ILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP  184 (360)
T ss_dssp             -HHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT
T ss_pred             -HHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC
Confidence             112235667888999999  999999999999999996 89999999999987654

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.65  E-value=2.4e-17  Score=158.11  Aligned_cols=145  Identities=21%  Similarity=0.242  Sum_probs=94.2

Q ss_pred             cCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|.||+|+.+ +|+.||||+.+......-  ...                                  .+
T Consensus         6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~----------------------------------~~   49 (299)
T 2r3i_A            6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG--VPS----------------------------------TA   49 (299)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCH----------------------------------HH
T ss_pred             hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchh--hHH----------------------------------HH
Confidence            34568999999999999964 899999999864321100  000                                  01


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.+    +. ++  .+++++..  ..+..++||||++| +|.+++.......      .++.        ....
T Consensus        50 ~~e~~~l~~----l~-h~--~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~------~~~~--------~~~~  107 (299)
T 2r3i_A           50 IREISLLKE----LN-HP--NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG------IPLP--------LIKS  107 (299)
T ss_dssp             HHHHHHHTT----CC-CT--TBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTC------CCHH--------HHHH
T ss_pred             HHHHHHHHH----cC-CC--CeeeEEEEEecCCceEEEEEcccC-CHHHHHHhhhccC------CCHH--------HHHH
Confidence            122222211    21 22  23444433  23567999999985 8888876532111      1111        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      +..++..++.+||+.|++|+|+||+||+++.+|.++|+|||++..+
T Consensus       108 ~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  153 (299)
T 2r3i_A          108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF  153 (299)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHH
T ss_pred             HHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhc
Confidence            5567888999999999999999999999999999999999988654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.65  E-value=4.1e-16  Score=149.06  Aligned_cols=142  Identities=18%  Similarity=0.131  Sum_probs=95.7

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|++|.||+|+. .++..||+|+........  .+...+                                  ..
T Consensus        31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~--~~~~~~----------------------------------~~   74 (290)
T 1t4h_A           31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SERQRF----------------------------------KE   74 (290)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHHHHH----------------------------------HH
T ss_pred             eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCH--HHHHHH----------------------------------HH
Confidence            45799999999999996 578999999876432111  011111                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc------CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL------SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      |...+.    .+.   +-.+++++..+      ....++||||++|++|.+++......+        +.        ..
T Consensus        75 e~~~l~----~l~---h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~--------~~  131 (290)
T 1t4h_A           75 EAEMLK----GLQ---HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK--------IK--------VL  131 (290)
T ss_dssp             HHHHHT----TCC---CTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCC--------HH--------HH
T ss_pred             HHHHHH----hCC---CCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCC--------HH--------HH
Confidence            222221    122   22233333321      233689999999999999987543322        11        11


Q ss_pred             HHHHHHHHHHHHHHHHCC--ccccCCCCCceEEc-cCCcEEEEeccccccc
Q 013944          315 DLVNKGVEATLVQLLETG--ILHADPHPGNLRYT-SSGQIGFLDFGLLCRM  362 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~g--ivH~DlhpgNilv~-~~g~l~l~DFGl~~~l  362 (433)
                      ..+..++..++.+||+.|  ++|+|+||.||+++ .++.++|+|||++...
T Consensus       132 ~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~  182 (290)
T 1t4h_A          132 RSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             HHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence            235567888999999999  99999999999997 7899999999998644

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.65  E-value=5.1e-16  Score=151.22  Aligned_cols=142  Identities=18%  Similarity=0.121  Sum_probs=97.1

Q ss_pred             CCccccccccceeEEEEe-----cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGST-----LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-----~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|++|+||+|+.     .+|+.||||+.++......    ..                                
T Consensus        45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~----~~--------------------------------   88 (326)
T 2w1i_A           45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----RD--------------------------------   88 (326)
T ss_dssp             EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHH----HH--------------------------------
T ss_pred             eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHH----HH--------------------------------
Confidence            356899999999999983     4789999999876433211    00                                


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeeccc----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYL----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                        +..|...+.+    +.+ +  .+++++..+    ....++||||++|++|.+++......       .++..      
T Consensus        89 --~~~E~~~l~~----l~h-~--~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~------  146 (326)
T 2w1i_A           89 --FEREIEILKS----LQH-D--NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-------IDHIK------  146 (326)
T ss_dssp             --HHHHHHHHHT----CCC-T--TBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTS-------SCHHH------
T ss_pred             --HHHHHHHHHh----CCC-C--CeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccC-------CCHHH------
Confidence              1223322222    222 2  223333221    13568999999999999998754210       11111      


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                       + ..+..+++.++.+||+.|++|+|+||+||+++.+|+++|+|||++..+
T Consensus       147 -~-~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          147 -L-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL  195 (326)
T ss_dssp             -H-HHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             -H-HHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence             1 225567888999999999999999999999999999999999998755

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.65  E-value=5.3e-17  Score=174.20  Aligned_cols=170  Identities=15%  Similarity=0.164  Sum_probs=105.5

Q ss_pred             ccCCccccccccceeEEEEec--CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          159 FISEEPVAAASFGQVYRGSTL--DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~--~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      |...+.||+|+||.||+|+..  +|+.||||+..+.......   ..                                 
T Consensus        82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~---~~---------------------------------  125 (681)
T 2pzi_A           82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQ---AM---------------------------------  125 (681)
T ss_dssp             EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHH---HH---------------------------------
T ss_pred             eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHH---HH---------------------------------
Confidence            344568999999999999964  6899999988754221100   00                                 


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecccC--Cc-----eEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYLS--RK-----RVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~-----~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                       +..|...+.    .+.   +-+|++++..+.  ..     .+|||||++|++|.+++..  .+        ++.+.   
T Consensus       126 -~~~E~~~l~----~l~---hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l--------~~~~~---  184 (681)
T 2pzi_A          126 -AMAERQFLA----EVV---HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--KL--------PVAEA---  184 (681)
T ss_dssp             -HHHHHGGGG----GCC---CTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--CC--------CHHHH---
T ss_pred             -HHHHHHHHH----hcC---CCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--CC--------CHHHH---
Confidence             011222211    122   223444443322  11     5999999999999887642  11        11111   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH---------HHHHHHHHHHHhc
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------FAMLASIVHIVNG  380 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------~~~~~~~~~~~~~  380 (433)
                           ..+..+++.+|.++|+.|++|+|+||+||+++. +.++|+|||+++.+.....         ......- .....
T Consensus       185 -----~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~-~~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~-~~~~s  257 (681)
T 2pzi_A          185 -----IAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-EQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTG-PTVAT  257 (681)
T ss_dssp             -----HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS-SCEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHC-SCHHH
T ss_pred             -----HHHHHHHHHHHHHHHHCCCeecccChHHeEEeC-CcEEEEecccchhcccCCccCCCccccCHHHHcCC-CCCce
Confidence                 225567888999999999999999999999987 4999999999876532100         0011100 13356


Q ss_pred             CHHHHHHHHHhc
Q 013944          381 DWQSLVHSLTEM  392 (433)
Q Consensus       381 d~~~~~~~l~~~  392 (433)
                      |+|+++..+++|
T Consensus       258 Di~slG~~l~~l  269 (681)
T 2pzi_A          258 DIYTVGRTLAAL  269 (681)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             ehhhhHHHHHHH
Confidence            888888888775

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.65  E-value=4e-17  Score=164.87  Aligned_cols=167  Identities=15%  Similarity=0.096  Sum_probs=93.9

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+...... ..++..++.++.++..+..                       
T Consensus        82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~-~~~~~~~~~E~~~~~~l~~-----------------------  137 (413)
T 3dzo_A           82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLRLLRG-----------------------  137 (413)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTT-----------------------
T ss_pred             EecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc-HHHHHHHHHHHHHHHhhcc-----------------------
Confidence            346899999999999995 689999999987433221 1112223322222222110                       


Q ss_pred             HHHHHHHHHHHh---cCCCCCeEeceee---cc-------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhh
Q 013944          240 LEAANASEFQES---HSPFPFIHVPKVF---RY-------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQK  306 (433)
Q Consensus       240 ~Ea~n~~~~~~~---~~~~~~v~vP~v~---~~-------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~  306 (433)
                        .+|.......   +.....+.++...   ..       .....+++|+.+ +++|.+++.......       .....
T Consensus       138 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~-------~~~~~  207 (413)
T 3dzo_A          138 --IKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS-------STHKS  207 (413)
T ss_dssp             --CCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHT-------TTSHH
T ss_pred             --CCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhccc-------ccCCC
Confidence              0011111111   1111111111110   00       012347777765 578888874221000       00011


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          307 LDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       307 ~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +...  ....+..+++.+|.|||+.|++|||+||+|||++.+|.++|+|||+++...
T Consensus       208 l~~~--~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~  262 (413)
T 3dzo_A          208 LVHH--ARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG  262 (413)
T ss_dssp             HHHH--HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred             CCHH--HHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecC
Confidence            1111  222355788999999999999999999999999999999999999987554

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.65  E-value=2.7e-17  Score=162.78  Aligned_cols=153  Identities=20%  Similarity=0.277  Sum_probs=94.8

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCch--hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR--HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~--~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      |...+.||+|++|.||+|+. .+|+.||||+.+....  +....++.+++       .+........             
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~-------~l~~~~~~~~-------------   80 (373)
T 1q8y_A           21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ-------RVNDADNTKE-------------   80 (373)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHH-------HHHHTCCSHH-------------
T ss_pred             EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHH-------Hhhcccccch-------------
Confidence            44567899999999999995 5899999999875421  11222222222       1110000000             


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDA  309 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (433)
                        ....+.|               +++++..+.      ...++||||+ |++|.+++.......      .++.     
T Consensus        81 --~~~~~~~---------------i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~------~~~~-----  131 (373)
T 1q8y_A           81 --DSMGANH---------------ILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRG------IPLI-----  131 (373)
T ss_dssp             --HHHHHTT---------------BCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSC------CCHH-----
T ss_pred             --hccccch---------------HHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccC------CcHH-----
Confidence              0000111               222222111      2569999999 889999886532211      1111     


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCceEEccC------CcEEEEecccccccC
Q 013944          310 KWRLLDLVNKGVEATLVQLLET-GILHADPHPGNLRYTSS------GQIGFLDFGLLCRME  363 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~-givH~DlhpgNilv~~~------g~l~l~DFGl~~~l~  363 (433)
                         ....+..+++.+|.+||+. |++|+|+||+||+++.+      +.++|+|||++..+.
T Consensus       132 ---~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~  189 (373)
T 1q8y_A          132 ---YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD  189 (373)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETT
T ss_pred             ---HHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccC
Confidence               1123566788999999998 99999999999999543      489999999987654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.64  E-value=2.9e-16  Score=151.81  Aligned_cols=145  Identities=26%  Similarity=0.381  Sum_probs=84.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|++|.||+|+. .+|+.||||+.+.......  ....+.                                  
T Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~----------------------------------   72 (318)
T 2dyl_A           29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEE--NKRILM----------------------------------   72 (318)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEEEETTSCHHH--HHHHHH----------------------------------
T ss_pred             ccceeeecCCeeEEEEEEecCCeEEEEEEecccccchH--HHHHHH----------------------------------
Confidence            456899999999999996 4899999999875432211  001111                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                       |   ......... ++  .+++++..  .....++||||+ |..+..+.....+.       +++.        ....+
T Consensus        73 -~---~~~~~~~~~-h~--~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~-------~~~~--------~~~~~  129 (318)
T 2dyl_A           73 -D---LDVVLKSHD-CP--YIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGP-------IPER--------ILGKM  129 (318)
T ss_dssp             -H---HHHHHHTTT-CT--TBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSC-------CCHH--------HHHHH
T ss_pred             -H---HHHHHHhcC-CC--ceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccC-------CCHH--------HHHHH
Confidence             1   011111221 22  23333332  345679999999 44454444321110       1111        11235


Q ss_pred             HHHHHHHHHHHHHC-CccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLET-GILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~-givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.++.+||.. |++|+|+||.||+++.++.++|+|||++..+..
T Consensus       130 ~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          130 TVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             HHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            56788899999995 999999999999999999999999999977654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.64  E-value=4.5e-15  Score=141.64  Aligned_cols=145  Identities=22%  Similarity=0.197  Sum_probs=97.1

Q ss_pred             cCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|++|.||+|+.. +|+.||||+.+......  .+...                                  +
T Consensus        25 ~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~--~~~~~----------------------------------~   68 (287)
T 2wei_A           25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTST----------------------------------I   68 (287)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS--SCHHH----------------------------------H
T ss_pred             eeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch--HHHHH----------------------------------H
Confidence            34578999999999999964 89999999875432110  00000                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      ..|...+.+    +. +++  +++++..  .....++||||++|++|.+.+......+        +..        ...
T Consensus        69 ~~e~~~l~~----l~-h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~--------~~~  125 (287)
T 2wei_A           69 LREVELLKK----LD-HPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--------EHD--------AAR  125 (287)
T ss_dssp             HHHHHHHHT----CC-CTT--BCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCC--------HHH--------HHH
T ss_pred             HHHHHHHHh----cc-CCC--ccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCC--------HHH--------HHH
Confidence            122222222    22 222  3333332  2456799999999999988876543322        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccC---CcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSS---GQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~---g~l~l~DFGl~~~l~  363 (433)
                      +..++..++.+||..|++|+|++|.||+++.+   +.++|+|||++....
T Consensus       126 i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A          126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             HHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            55678889999999999999999999999764   479999999987654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.60  E-value=1.3e-16  Score=169.05  Aligned_cols=152  Identities=19%  Similarity=0.207  Sum_probs=100.0

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.++......   ...                                  
T Consensus        16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~---~~~----------------------------------   58 (676)
T 3qa8_A           16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKN---RER----------------------------------   58 (676)
T ss_dssp             -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHH---HHH----------------------------------
T ss_pred             eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHH---HHH----------------------------------
Confidence            45567899999999999986 5799999999876543211   111                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc-----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY-----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                      +..|...+.++    .+.+-+.+-.++..     .....++||||++|++|.+++.......     .+++...      
T Consensus        59 ~~~Ei~iL~~L----~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~-----~lse~~i------  123 (676)
T 3qa8_A           59 WCLEIQIMKKL----NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCC-----GLKEGPI------  123 (676)
T ss_dssp             HHHHHHHHHHC----CBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTT-----CCCSSHH------
T ss_pred             HHHHHHHHHhC----CCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCC-----CCCHHHH------
Confidence            12233332222    11111112122111     1355699999999999999987533110     0111111      


Q ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCc---EEEEecccccccCH
Q 013944          313 LLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQ---IGFLDFGLLCRMER  364 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~---l~l~DFGl~~~l~~  364 (433)
                        ..+..++..++.+||+.|++|+|+||+||+++.+|.   ++|+|||++..+..
T Consensus       124 --~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~  176 (676)
T 3qa8_A          124 --RTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ  176 (676)
T ss_dssp             --HHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS
T ss_pred             --HHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccc
Confidence              125567888999999999999999999999997765   99999999987643

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.60  E-value=1.3e-17  Score=161.61  Aligned_cols=142  Identities=18%  Similarity=0.204  Sum_probs=89.4

Q ss_pred             cCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          160 ISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ...+.||+|++|.||+|+..  ..||||+.+......-.  .                            ..+.+     
T Consensus        36 ~~~~~lg~G~~g~V~~~~~~--~~~avk~~~~~~~~~~~--~----------------------------~~~~~-----   78 (319)
T 2y4i_B           36 EIGELIGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQ--L----------------------------KAFKR-----   78 (319)
T ss_dssp             ECCCBCCCSSSSEEEEEEES--SSEEEEECCCCSCCCCC--C----------------------------CCCCT-----
T ss_pred             EEeeEeccCCceEEEEEEEc--CeEEEEEeecCCCCHHH--H----------------------------HHHHH-----
Confidence            35678999999999999864  35999988753211000  0                            00111     


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                       |...+.+    +. ++  .+++++..  .....+++|||++|++|.+++......       +++...        ..+
T Consensus        79 -e~~~l~~----l~-h~--~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~-------~~~~~~--------~~i  135 (319)
T 2y4i_B           79 -EVMAYRQ----TR-HE--NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIV-------LDVNKT--------RQI  135 (319)
T ss_dssp             -TGGGGTT----CC-CT--TBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCC-------CCSHHH--------HHH
T ss_pred             -HHHHHhc----CC-CC--CEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCC-------CCHHHH--------HHH
Confidence             1111111    11 12  22333322  235679999999999999998643210       111111        235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      ..+++.++.+||+.|++|+|+||+||+++ +|.++|+|||++...
T Consensus       136 ~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~  179 (319)
T 2y4i_B          136 AQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS  179 (319)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred             HHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence            56788899999999999999999999997 789999999987654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.33  E-value=3.8e-12  Score=118.91  Aligned_cols=84  Identities=15%  Similarity=0.049  Sum_probs=55.8

Q ss_pred             hhccccCCcccc-ccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          155 SFFSFISEEPVA-AASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       155 ~~f~~~~~~pig-sgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      +.+.....++++ .|+.++||++...+|+.++||+.++.....+                                    
T Consensus        17 ~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~------------------------------------   60 (264)
T 1nd4_A           17 ERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNEL------------------------------------   60 (264)
T ss_dssp             TTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCH------------------------------------
T ss_pred             HhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhh------------------------------------
Confidence            333334456776 5667999999877788999999876422222                                    


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecccC--CceEEEeeccCCCCcc
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRYLS--RKRVLTMEWMVGESPT  284 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LVmE~i~G~~L~  284 (433)
                           ..|+..+..+.+     ..+.+|+++....  +..+++|||++|.++.
T Consensus        61 -----~~E~~~l~~l~~-----~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           61 -----QDEAARLSWLAT-----TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             -----HHHHHHHHHHHT-----TTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             -----hHHHHHHHHHHh-----CCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence                 334444444432     1466888876543  3569999999998885

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.19  E-value=1.5e-10  Score=108.75  Aligned_cols=139  Identities=15%  Similarity=0.108  Sum_probs=90.0

Q ss_pred             ccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHH
Q 013944          163 EPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLEA  242 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea  242 (433)
                      ...+.+|.+.||++.. +|+.+++|+.+++....                                      .-++..|+
T Consensus        20 ~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~--------------------------------------~~~~~~E~   60 (263)
T 3tm0_A           20 KDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGT--------------------------------------TYDVEREK   60 (263)
T ss_dssp             ECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTS--------------------------------------TTCHHHHH
T ss_pred             eeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCC--------------------------------------HHHHHHHH
Confidence            3567788899999975 57899999987532110                                      00124455


Q ss_pred             HHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          243 ANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       243 ~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      +.+..+.+      .+.+|+++...  .+..++||||++|.++.+.....             .+..        -+..+
T Consensus        61 ~~l~~l~~------~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~-------------~~~~--------~~~~~  113 (263)
T 3tm0_A           61 DMMLWLEG------KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE-------------QSPE--------KIIEL  113 (263)
T ss_dssp             HHHHHHTT------TSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCCTT-------------TCHH--------HHHHH
T ss_pred             HHHHHHhc------CCCCCeEEEEEecCCceEEEEEecCCeehhhccCCc-------------ccHH--------HHHHH
Confidence            55544432      36688888643  35678999999999987652100             0000        02223


Q ss_pred             HHHHHHHHHH-----------------------------------------------------------CCccccCCCCC
Q 013944          321 VEATLVQLLE-----------------------------------------------------------TGILHADPHPG  341 (433)
Q Consensus       321 i~~~l~~lh~-----------------------------------------------------------~givH~Dlhpg  341 (433)
                      +...+..||.                                                           .+++|+|+||+
T Consensus       114 l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~  193 (263)
T 3tm0_A          114 YAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDS  193 (263)
T ss_dssp             HHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTT
T ss_pred             HHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcC
Confidence            3345555555                                                           45899999999


Q ss_pred             ceEEccCCcEEEEecccccccCHHHH
Q 013944          342 NLRYTSSGQIGFLDFGLLCRMERKHQ  367 (433)
Q Consensus       342 Nilv~~~g~l~l~DFGl~~~l~~~~~  367 (433)
                      ||++++++.+.++||+.+..-++..-
T Consensus       194 Nil~~~~~~~~lIDwe~a~~gd~~~D  219 (263)
T 3tm0_A          194 NIFVKDGKVSGFIDLGRSGRADKWYD  219 (263)
T ss_dssp             SEEEETTEEEEECCCTTCEEEEHHHH
T ss_pred             cEEEECCcEEEEEEchhcccCCHHHH
Confidence            99997654556999999887776543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.09  E-value=1.4e-09  Score=107.11  Aligned_cols=169  Identities=13%  Similarity=0.138  Sum_probs=101.3

Q ss_pred             CCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcC--CCchhhHHHHHHHHHHHHHH
Q 013944          133 IPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQR--PNLRHVVVRDIYILRIGLGL  210 (433)
Q Consensus       133 ~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~--p~~~~~~~~Dl~~l~~~~~~  210 (433)
                      .+.++...+.+.+.+.++.. .   ....-++++.|..+.||+.+.. +..+++|+.+  ++....              
T Consensus        18 ~~~ld~~~l~~~l~~~~~~~-~---~~~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~--------------   78 (359)
T 3dxp_A           18 QQRFDTEALEAWMRQHVEGF-A---GPLSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLP--------------   78 (359)
T ss_dssp             --CCCHHHHHHHHHHHSTTC-C---CCCEEEECCC-CCSCEEEEECS-SCEEEEECCCC---------------------
T ss_pred             ccCCCHHHHHHHHHHhCCCC-C---CCceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCC--------------
Confidence            34567788888887776421 1   1234578999999999999864 5689999877  543110              


Q ss_pred             HHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCC-----ceEEEeeccCCCCcch
Q 013944          211 LQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR-----KRVLTMEWMVGESPTD  285 (433)
Q Consensus       211 ~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-----~~~LVmE~i~G~~L~~  285 (433)
                                             ..-++..|++.+..+.+     ..+.+|+++.....     ..+++|||++|..+.+
T Consensus        79 -----------------------~~~~~~~E~~~l~~L~~-----~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~  130 (359)
T 3dxp_A           79 -----------------------SAHAIEREYRVMDALAG-----TDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWD  130 (359)
T ss_dssp             --------------------------CHHHHHHHHHHHTT-----SSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCC
T ss_pred             -----------------------cHHHHHHHHHHHHHhhc-----CCCCCCcEEEECCCCCccCCeEEEEEecCCeecCC
Confidence                                   00122345555544432     35678999876543     3789999999988854


Q ss_pred             hhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q 013944          286 LISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGVEATLVQLLE-----------------------------------  330 (433)
Q Consensus       286 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i~~~l~~lh~-----------------------------------  330 (433)
                      ...  ..        .++.+...        +...+...|..||.                                   
T Consensus       131 ~~~--~~--------l~~~~~~~--------~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (359)
T 3dxp_A          131 QSL--PG--------MSPAERTA--------IYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE  192 (359)
T ss_dssp             TTC--TT--------CCHHHHHH--------HHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred             Ccc--cc--------CCHHHHHH--------HHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence            210  00        01111111        11122233334443                                   


Q ss_pred             -----------------------CCccccCCCCCceEEccCCc--EEEEecccccccCHHH
Q 013944          331 -----------------------TGILHADPHPGNLRYTSSGQ--IGFLDFGLLCRMERKH  366 (433)
Q Consensus       331 -----------------------~givH~DlhpgNilv~~~g~--l~l~DFGl~~~l~~~~  366 (433)
                                             .+++|+|+||+||++++++.  +.++||+.+..-++..
T Consensus       193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p~~  253 (359)
T 3dxp_A          193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMG  253 (359)
T ss_dssp             CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECHHH
T ss_pred             CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCHHH
Confidence                                   47999999999999998763  6899999988766644

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.81  E-value=2.9e-08  Score=93.33  Aligned_cols=37  Identities=24%  Similarity=0.360  Sum_probs=30.9

Q ss_pred             CccccCCCCCceEEccCCcEEEEecccccccCHHHHH
Q 013944          332 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF  368 (433)
Q Consensus       332 givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~  368 (433)
                      .++|+|+||+||++++++.+.|+||+.+..-++..-.
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gdp~~Dl  230 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRVGIADRYQDL  230 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCEEEETHHHH
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECcccccCCHHHHH
Confidence            3899999999999987766779999999877765443

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.76  E-value=2.9e-08  Score=95.32  Aligned_cols=97  Identities=12%  Similarity=-0.005  Sum_probs=61.2

Q ss_pred             CCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCc-hhhHHHHHHHHHHHHHHHHH
Q 013944          135 PFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNL-RHVVVRDIYILRIGLGLLQK  213 (433)
Q Consensus       135 ~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~-~~~~~~Dl~~l~~~~~~~~~  213 (433)
                      ..+.+.+.+.+.+.+..     +.....++++.|....||+..    ..+++|+.++.. ...                 
T Consensus         3 ~~~~~~l~~~l~~~~p~-----~~~~~i~~~~~G~~n~v~~v~----~~~vlR~~~~~~~~~~-----------------   56 (304)
T 3sg8_A            3 TYTFDQVEKAIEQLYPD-----FTINTIEISGEGNDCIAYEIN----RDFIFKFPKHSRGSTN-----------------   56 (304)
T ss_dssp             CCCHHHHHHHHHHHCTT-----CCCCCCCEEEECSSEEEEEST----TSEEEEEESSHHHHHH-----------------
T ss_pred             cCCHHHHHHHHHHhCCC-----ccceeeEecCCCCcceEEEEC----CEEEEEecCCcchHHH-----------------
Confidence            45667778888777632     112334679999999999862    568999876430 111                 


Q ss_pred             HHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCC-----ceEEEeeccCCCCcch
Q 013944          214 IAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSR-----KRVLTMEWMVGESPTD  285 (433)
Q Consensus       214 ~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-----~~~LVmE~i~G~~L~~  285 (433)
                                              +..|++.+..+.    ....+.+|+++.....     ..++||||++|.++.+
T Consensus        57 ------------------------~~~E~~~l~~l~----~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~  105 (304)
T 3sg8_A           57 ------------------------LFNEVNILKRIH----NKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTP  105 (304)
T ss_dssp             ------------------------HHHHHHHHHHHT----TSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCH
T ss_pred             ------------------------HHHHHHHHHHHH----hcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCc
Confidence                                    133444443332    2345678888865332     3488999999998875

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.74  E-value=5.4e-08  Score=97.06  Aligned_cols=111  Identities=16%  Similarity=0.117  Sum_probs=60.8

Q ss_pred             CCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHH
Q 013944          134 PPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQ  212 (433)
Q Consensus       134 p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~  212 (433)
                      -+++.+.+.+.+. .+|.-...  .....+++|.|+.+.||+++.. +|+.|+||...|..+- ...+.           
T Consensus        10 ~~l~~~~v~~~l~-~~~~~~~~--~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~-~~~~~-----------   74 (397)
T 2olc_A           10 ETLNESSAVALAV-KLGLFPSK--STLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKV-VGESW-----------   74 (397)
T ss_dssp             CCCCHHHHHHHHH-HTTC-------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC--------C-----------
T ss_pred             ccCCHHHHHHHHH-hcCcCCCC--CceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcc-cCCCC-----------
Confidence            4566677777766 55421111  1244678999999999999753 5789999988765430 00000           


Q ss_pred             HHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCC
Q 013944          213 KIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGES  282 (433)
Q Consensus       213 ~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~  282 (433)
                           .....              .+..|++.+..+.+.    ....+|+++.......++||||++|..
T Consensus        75 -----~~~~~--------------r~~~E~~~L~~l~~~----~~~~vP~~~~~d~~~~~lvmE~l~g~~  121 (397)
T 2olc_A           75 -----PLTID--------------RARIESSALIRQGEH----VPHLVPRVFYSDTEMAVTVMEDLSHLK  121 (397)
T ss_dssp             -----CCCTT--------------HHHHHHHHHHHHHTT----CGGGSCCEEEEETTTTEEEECCCTTSE
T ss_pred             -----cCcHH--------------HHHHHHHHHHHhhhh----CCCCcCeEEEEcCCccEEEEEeCCCcc
Confidence                 00000              012344444333322    234688888655556799999998853

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=98.60  E-value=3.3e-07  Score=87.20  Aligned_cols=97  Identities=22%  Similarity=0.220  Sum_probs=66.7

Q ss_pred             HHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhc
Q 013944          139 SIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRK  218 (433)
Q Consensus       139 ~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~  218 (433)
                      +.+.+.+.+.+|.++..      -+++|.|..++||+.++.||+.|+||+.+++.....    ..               
T Consensus         3 ~~v~a~~~~l~G~~v~~------v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~----~~---------------   57 (288)
T 3f7w_A            3 NSVAARVTELTGREVAA------VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALD----GL---------------   57 (288)
T ss_dssp             HHHHHHHHHHHCCCEEE------EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCT----TH---------------
T ss_pred             HHHHHHHHHhcCCCeEE------EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchh----hH---------------
Confidence            35566777788876543      468999999999999999999999999765432110    00               


Q ss_pred             CCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcch
Q 013944          219 SDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTD  285 (433)
Q Consensus       219 ~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~  285 (433)
                                         |..|++.+..+.    ....+.+|+++..  +..+++|||+++.....
T Consensus        58 -------------------~~~Ea~~L~~L~----~~~~vpvP~v~~~--~~~~lv~e~l~~~~~~~   99 (288)
T 3f7w_A           58 -------------------FRAEALGLDWLG----RSFGSPVPQVAGW--DDRTLAMEWVDERPPTP   99 (288)
T ss_dssp             -------------------HHHHHHHHHHHT----CSTTCCSCCEEEE--ETTEEEEECCCCCCCCH
T ss_pred             -------------------HHHHHHHHHHHH----hhCCCCcceEEec--cCceEEEEeecccCCCh
Confidence                               123444444332    2345788999864  45589999999887653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.57  E-value=4.8e-07  Score=87.04  Aligned_cols=35  Identities=20%  Similarity=0.409  Sum_probs=28.9

Q ss_pred             CCccccCCCCCceEEcc---CCcE-EEEecccccccCHH
Q 013944          331 TGILHADPHPGNLRYTS---SGQI-GFLDFGLLCRMERK  365 (433)
Q Consensus       331 ~givH~DlhpgNilv~~---~g~l-~l~DFGl~~~l~~~  365 (433)
                      ..++|+|+||+||++++   ++++ .++||+.+..-++.
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~  228 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPD  228 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGG
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHH
Confidence            36899999999999987   4665 79999988766554

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.57  E-value=6.7e-07  Score=86.58  Aligned_cols=36  Identities=19%  Similarity=0.143  Sum_probs=31.0

Q ss_pred             HCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          330 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       330 ~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ..+++|+|+||+||+++.++.+.++||+.+..-++.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~~~  256 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPI  256 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCEECCTH
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcccCChH
Confidence            368999999999999988889999999988755543

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.48  E-value=3.9e-07  Score=88.03  Aligned_cols=98  Identities=15%  Similarity=0.198  Sum_probs=68.0

Q ss_pred             CHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHh
Q 013944          137 PRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAK  216 (433)
Q Consensus       137 ~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~  216 (433)
                      .+..+.+.+.+.+|.+.    .-...++++.|.+.++|+... ++..++||+..+.....+                   
T Consensus        20 ~~~~l~~~L~~~lg~~~----~i~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~~~~~-------------------   75 (312)
T 3jr1_A           20 MWKSISQVLAEQFGAYY----FIKHKEKLYSGEMNEIWLIND-EVQTVFVKINERSYRSMF-------------------   75 (312)
T ss_dssp             HHHHHHHHHHHHHSSCC----CCCEEEEECCSSSSEEEEEES-SSCEEEEEEEEGGGHHHH-------------------
T ss_pred             cHHHHHHHHHHHhCCCc----ceeeeEEeCCccceeeeEEEE-CCCeEEEEeCCcccHHHH-------------------
Confidence            45667778888888641    223457899999999999876 678899999765422222                   


Q ss_pred             hcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcc
Q 013944          217 RKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPT  284 (433)
Q Consensus       217 ~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~  284 (433)
                                            ..|++.+..+.+.    ..+.||+++...  .+..+++|||++|.++.
T Consensus        76 ----------------------~~E~~~L~~L~~~----~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~  119 (312)
T 3jr1_A           76 ----------------------RAEADQLALLAKT----NSINVPLVYGIGNSQGHSFLLLEALNKSKNK  119 (312)
T ss_dssp             ----------------------HHHHHHHHHHHHT----TSSBCCCEEEEEECSSEEEEEEECCCCCCCC
T ss_pred             ----------------------HHHHHHHHHHHhh----CCCCcceEEEEeecCCceEEEEEeccCCCCC
Confidence                                  3355555555432    347889998643  35689999999998764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.32  E-value=1.3e-06  Score=85.62  Aligned_cols=40  Identities=25%  Similarity=0.387  Sum_probs=31.8

Q ss_pred             HCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHH
Q 013944          330 ETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFA  369 (433)
Q Consensus       330 ~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~  369 (433)
                      ...++|+|+||+||+++.++.+.|+||+.+..-++..-.+
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g~p~~Dla  260 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVA  260 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGCEEECHHHHHH
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEcccccccCCcHHHHH
Confidence            3579999999999999854447899999998777655433

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=98.30  E-value=4e-06  Score=80.66  Aligned_cols=178  Identities=11%  Similarity=0.088  Sum_probs=91.7

Q ss_pred             CCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCC-chhhHHHHHHHHHHHHHHHH
Q 013944          134 PPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPN-LRHVVVRDIYILRIGLGLLQ  212 (433)
Q Consensus       134 p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~-~~~~~~~Dl~~l~~~~~~~~  212 (433)
                      ++++.+++.+++++ +|.  .++   ..-++++.|....+|+....+| .+++|+.++. ..+.+..             
T Consensus         5 ~~~~~~~l~~~l~~-~~~--~~~---~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~~~l~~-------------   64 (322)
T 2ppq_A            5 TDITEDELRNFLTQ-YDV--GSL---TSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEKNDLPF-------------   64 (322)
T ss_dssp             CCCCHHHHHHHHTT-BCC--CCE---EEEEEECC---EEEEEEEESSC-CEEEEEECC---CCHHHH-------------
T ss_pred             ccCCHHHHHHHHHh-CCC--Ccc---eEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCCHHHHHH-------------
Confidence            45667777777754 554  111   2346888899999999987555 6889998763 1222222             


Q ss_pred             HHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeeccc--------CCceEEEeeccCCCCcc
Q 013944          213 KIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYL--------SRKRVLTMEWMVGESPT  284 (433)
Q Consensus       213 ~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--------~~~~~LVmE~i~G~~L~  284 (433)
                                                  |...+..+.+.     .+.+|+++...        .+..+++|+|++|.++.
T Consensus        65 ----------------------------e~~~l~~L~~~-----g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~  111 (322)
T 2ppq_A           65 ----------------------------FLGLMQHLAAK-----GLSCPLPLPRKDGELLGELSGRPAALISFLEGMWLR  111 (322)
T ss_dssp             ----------------------------HHHHHHHHHHT-----TCCCCCBCCBTTCCSCEEETTEEEEEEECCCCBCCS
T ss_pred             ----------------------------HHHHHHHHHHC-----CCCCCcccCCCCCCEEEEECCEEEEEEEeCCCcCCC
Confidence                                        22222233322     35578877542        24568999999998764


Q ss_pred             hh--------------hhh-ccCCCCC--CCC---chhhhhh--hHHHHHHHHHHHHHHHHHHHHHH-------HCCccc
Q 013944          285 DL--------------ISL-STGSSVD--GSS---THLDRQK--LDAKWRLLDLVNKGVEATLVQLL-------ETGILH  335 (433)
Q Consensus       285 ~~--------------l~~-~~~~~~~--~~~---~~~~~~~--~~~~~~l~~l~~~~i~~~l~~lh-------~~givH  335 (433)
                      ..              ++. ....+..  ...   .|...-.  ......+...+...+...+..+.       ..+++|
T Consensus       112 ~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liH  191 (322)
T 2ppq_A          112 KPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIH  191 (322)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSCEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccCCcccCC
Confidence            21              010 0111100  000   0110000  00000000000011222333333       247999


Q ss_pred             cCCCCCceEEccCCcEEEEecccccccCH
Q 013944          336 ADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       336 ~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +|+||+||++++++.+.++||+.+..-..
T Consensus       192 gDl~~~Nil~~~~~~~~lIDf~~a~~g~~  220 (322)
T 2ppq_A          192 ADLFQDNVFFLGDELSGLIDFYFACNDLL  220 (322)
T ss_dssp             SCCCGGGEEEETTEEEEECCCTTCEEEEH
T ss_pred             CCCCccCEEEeCCceEEEecchhccCchh
Confidence            99999999998765568999998876444

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=98.29  E-value=2.7e-06  Score=83.04  Aligned_cols=55  Identities=9%  Similarity=0.106  Sum_probs=41.5

Q ss_pred             CCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCCc
Q 013944          134 PPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNL  193 (433)
Q Consensus       134 p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~  193 (433)
                      |+++.+.+.+.+.+.+|.....    +..-+.|.|+...||+....+| .+++|+.++..
T Consensus         4 p~l~~~~l~~~l~~~ygl~~~~----~~~l~~G~g~~N~vy~v~~~~g-~~vLK~~~~~~   58 (339)
T 3i1a_A            4 QPIQAQQLIELLKVHYGIDIHT----AQFIQGGADTNAFAYQADSESK-SYFIKLKYGYH   58 (339)
T ss_dssp             CSSCTTHHHHHHHHHHCCCCSE----EEEETTTSCSSCEEEEEECSSC-EEEEEEEECSS
T ss_pred             CCCCHHHHHHHHHHHcCCCcce----eEEeeccCccccceEEEEeCCC-CEEEEEecCcc
Confidence            6778888888888888876432    2334567777899999987677 99999987653

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=98.26  E-value=1.4e-05  Score=77.15  Aligned_cols=53  Identities=23%  Similarity=0.260  Sum_probs=37.9

Q ss_pred             CCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEecCCCEEEEEEcCCC
Q 013944          133 IPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPN  192 (433)
Q Consensus       133 ~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~  192 (433)
                      .+..+.+.+.+.+ +.+|....     -..++++ |....||+....+|+.+++|+.+|+
T Consensus         8 ~~~l~~~~i~~~l-~~~g~~~~-----~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~   60 (328)
T 1zyl_A            8 FQTLHPDTIMDAL-FEHGIRVD-----SGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPE   60 (328)
T ss_dssp             CCCCCHHHHHHHH-HHTTCCCC-----SCCEEEC-CSSSEEEEECCTTCCCEEEEEECTT
T ss_pred             CCCCCHHHHHHHH-HHcCCCCC-----ceEEeec-CcccceEEEEcCCCCEEEEEEcCCC
Confidence            4556677788888 55665432     1235677 8888999987777888999998875

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.24  E-value=2.5e-06  Score=85.70  Aligned_cols=36  Identities=17%  Similarity=0.195  Sum_probs=30.4

Q ss_pred             HHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          329 LETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       329 h~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +...++|+|+||+||++++++ ++++||+.+..-++.
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~  265 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG  265 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH
Confidence            357899999999999998776 999999988766544

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=98.16  E-value=5.7e-06  Score=79.05  Aligned_cols=33  Identities=15%  Similarity=0.183  Sum_probs=28.0

Q ss_pred             CccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          332 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       332 givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .++|+|+||+||+ ..++++.++||..+..-++.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~~~  206 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGMNDPL  206 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEEECTH
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccCCCHH
Confidence            5899999999999 56788999999988765553

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=98.11  E-value=1e-05  Score=78.39  Aligned_cols=34  Identities=26%  Similarity=0.356  Sum_probs=28.5

Q ss_pred             CCccccCCCCCceEEccC----CcEEEEecccccccCH
Q 013944          331 TGILHADPHPGNLRYTSS----GQIGFLDFGLLCRMER  364 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~----g~l~l~DFGl~~~l~~  364 (433)
                      ..++|+|+||+||+++++    +.+.++||+.+..=++
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence            579999999999999875    7899999998765433

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=98.02  E-value=7.1e-05  Score=75.38  Aligned_cols=52  Identities=10%  Similarity=0.033  Sum_probs=33.4

Q ss_pred             HHHHHHHHHhCCChhhhc-cccCCccccccccceeEEEEecC--------CCEEEEEEcCC
Q 013944          140 IAMKIIEEELGSPVESFF-SFISEEPVAAASFGQVYRGSTLD--------GSIVAVKVQRP  191 (433)
Q Consensus       140 ~~~~~l~~elg~~~~~~f-~~~~~~pigsgS~gqVy~a~l~~--------G~~VAVKv~~p  191 (433)
                      .+.+++.+-++..+..+- +.+.-++|+.|-...||+....+        ++.+++|+..+
T Consensus        55 ~a~~l~~~~l~~~w~~~~~~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~  115 (429)
T 1nw1_A           55 RAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN  115 (429)
T ss_dssp             HHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred             HHHHHHHHhccCCcCCCCccceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC
Confidence            344444444554444221 12345689899899999998643        58999999854

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.89  E-value=5.5e-05  Score=74.36  Aligned_cols=32  Identities=19%  Similarity=0.135  Sum_probs=25.6

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+++|+|+||+||+++.+ ++.++||..+..=+
T Consensus       212 ~~l~HgDl~~~Nil~~~~-~~~lID~e~a~~g~  243 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNK-CLRLIDFEYSGFNF  243 (369)
T ss_dssp             EEEECSCCCGGGEEECC--CEEECCCTTCEEEE
T ss_pred             eEEEeCCCCcccEEecCC-cEEEEEecCCCCCc
Confidence            468999999999999754 59999998776433

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.86  E-value=0.00026  Score=70.02  Aligned_cols=178  Identities=15%  Similarity=0.103  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHhCCChhhhc-cccCCccccccccceeEEEEec--------CCCEEEEEEcCCCchhhHHHHHHHHHHHHH
Q 013944          139 SIAMKIIEEELGSPVESFF-SFISEEPVAAASFGQVYRGSTL--------DGSIVAVKVQRPNLRHVVVRDIYILRIGLG  209 (433)
Q Consensus       139 ~~~~~~l~~elg~~~~~~f-~~~~~~pigsgS~gqVy~a~l~--------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~  209 (433)
                      +.+.++..+-++..|..+- +.+.-+++..|--..+|+....        +++.+++|+..+......            
T Consensus        31 ~~~~~~~~~~l~~~W~~~~~~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~------------   98 (379)
T 3feg_A           31 RRAYQWCREYLGGAWRRVQPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVD------------   98 (379)
T ss_dssp             HHHHHHHHHHHCGGGGGCCGGGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHH------------
T ss_pred             HHHHHHHHHHccCcCCCCCcCceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHH------------
Confidence            3455555565665565531 3456678988988999999864        357999998643221110            


Q ss_pred             HHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhh-h
Q 013944          210 LLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLI-S  288 (433)
Q Consensus       210 ~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l-~  288 (433)
                                                 |...|.+++..+.+.     .+ .|+++.....  .+||||++|.++..-. .
T Consensus        99 ---------------------------~~~rE~~vl~~L~~~-----gv-~P~ll~~~~~--g~v~e~i~G~~l~~~~l~  143 (379)
T 3feg_A           99 ---------------------------SLVLESVMFAILAER-----SL-GPQLYGVFPE--GRLEQYIPSRPLKTQELR  143 (379)
T ss_dssp             ---------------------------HHHHHHHHHHHHHHT-----TS-SCCEEEEETT--EEEEECCSEEECCGGGGG
T ss_pred             ---------------------------HHHHHHHHHHHHHhc-----CC-CCeEEEEcCC--ccEEEEecCccCChhHhC
Confidence                                       112356666555542     22 4888765544  4999999997765311 0


Q ss_pred             -------------hccCCCC--CCCCchhhhhhhHHHHHHHHH---------------HHHHHHHHHHHHHH----CCcc
Q 013944          289 -------------LSTGSSV--DGSSTHLDRQKLDAKWRLLDL---------------VNKGVEATLVQLLE----TGIL  334 (433)
Q Consensus       289 -------------~~~~~~~--~~~~~~~~~~~~~~~~~l~~l---------------~~~~i~~~l~~lh~----~giv  334 (433)
                                   .-...+.  .....+..++-..+...+...               +...+...-..+-.    ..++
T Consensus       144 ~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~  223 (379)
T 3feg_A          144 EPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFC  223 (379)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEE
Confidence                         0011111  000000111111111111100               00111111112221    3689


Q ss_pred             ccCCCCCceEEccC----CcEEEEecccccccC
Q 013944          335 HADPHPGNLRYTSS----GQIGFLDFGLLCRME  363 (433)
Q Consensus       335 H~DlhpgNilv~~~----g~l~l~DFGl~~~l~  363 (433)
                      |+|++++||+++++    +.+.++||..++.-+
T Consensus       224 H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~  256 (379)
T 3feg_A          224 HNDIQEGNILLLSEPENADSLMLVDFEYSSYNY  256 (379)
T ss_dssp             CSCCCGGGEEEESCC---CCEEECCCTTCEEEE
T ss_pred             cCCCCCCeEEEcCCCCccCcEEEEecccCCcCC
Confidence            99999999999876    789999999877433

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.65  E-value=0.00029  Score=71.50  Aligned_cols=34  Identities=3%  Similarity=0.082  Sum_probs=24.3

Q ss_pred             cCCccccccccceeEEEEecC-CCEEEEEEcCCCc
Q 013944          160 ISEEPVAAASFGQVYRGSTLD-GSIVAVKVQRPNL  193 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~~-G~~VAVKv~~p~~  193 (433)
                      +.-++|+.|-...+|+....+ +..+++|+..++.
T Consensus       111 ~~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~  145 (458)
T 2qg7_A          111 LEFQIINGGITNILIKVKDMSKQAKYLIRLYGPKT  145 (458)
T ss_dssp             EEEEEECC--CEEEEEEEETTTTEEEEEEEECC-C
T ss_pred             eEEEEcCCCeEeEEEEEEECCCCceEEEEECCCCh
Confidence            345689999999999998754 5889999986654

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=97.15  E-value=0.0034  Score=62.89  Aligned_cols=32  Identities=19%  Similarity=0.201  Sum_probs=27.1

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++|+|++++|++ +.++.+.++||..++.-+
T Consensus       262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~  293 (424)
T 3mes_A          262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAINF  293 (424)
T ss_dssp             EEEECSCCCGGGEE-ECSSCEEECCCTTCEEEE
T ss_pred             ceEECCCCCcccee-cCCCcEEEEecccCCcCC
Confidence            35899999999999 778899999998877433

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=95.59  E-value=0.11  Score=51.38  Aligned_cols=53  Identities=11%  Similarity=0.011  Sum_probs=31.8

Q ss_pred             HHHHhCCChhhhc-cccCCccccccccceeEEEEecC--------CCEEEEEEcCCCchhhH
Q 013944          145 IEEELGSPVESFF-SFISEEPVAAASFGQVYRGSTLD--------GSIVAVKVQRPNLRHVV  197 (433)
Q Consensus       145 l~~elg~~~~~~f-~~~~~~pigsgS~gqVy~a~l~~--------G~~VAVKv~~p~~~~~~  197 (433)
                      ..+-++..|.++- +.+.-++++.|---.+|+.+..+        ++.|++++..++....+
T Consensus        39 c~~~l~g~W~~v~~~~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~  100 (401)
T 3g15_A           39 CKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRS  100 (401)
T ss_dssp             HHHHSCGGGTTCCGGGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC------
T ss_pred             HHHhCCccccCCCcCCEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchh
Confidence            4455565454432 34556788888888999998643        36799998777655433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	433
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.91
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.91
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.9
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.9
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.9
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.89
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.89
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.89
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.89
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.89
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.88
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.88
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.88
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.88
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.88
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.88
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.87
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.87
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.87
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.87
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.87
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.87
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.87
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.86
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.86
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.86
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.86
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.86
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.86
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.86
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.86
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.86
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.86
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.86
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.84
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.84
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.83
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.83
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.83
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.83
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.83
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.82
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.82
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.82
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.82
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.8
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.8
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.8
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.8
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.8
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.8
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.79
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.79
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.79
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.78
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.78
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.78
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.78
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.77
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.76
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.66
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.71
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.38
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.29
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	98.11
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.31
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.24

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.4e-26  Score=215.42  Aligned_cols=193  Identities=18%  Similarity=0.209  Sum_probs=121.4

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.++.....  .+                                 .+-.
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~--~~---------------------------------~~~~   52 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK--AG---------------------------------VEHQ   52 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT---------------------------------CHHH
T ss_pred             eEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccC--hH---------------------------------HHHH
Confidence            33457899999999999996 589999999875321100  00                                 0000


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +.+|...+.    .+. +++  |.+++..+  ....+||||||+|++|.+++.....++        +.        ...
T Consensus        53 ~~~E~~il~----~l~-hpn--Iv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~--------e~--------~~~  109 (263)
T d2j4za1          53 LRREVEIQS----HLR-HPN--ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--------EQ--------RTA  109 (263)
T ss_dssp             HHHHHHHHH----TCC-CTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCC--------HH--------HHH
T ss_pred             HHHHHHHHH----hcC-CCC--CCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCC--------HH--------HHH
Confidence            122332222    222 222  33444332  356689999999999999987654332        11        122


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVV  395 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~  395 (433)
                      .+..+++.+|.|||+.|++|||+||+|||++.+|.++|+|||++...+......        ..+....++.....-...
T Consensus       110 ~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~--------~~Gt~~Y~APE~~~~~~~  181 (263)
T d2j4za1         110 TYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--------LCGTLDYLPPEMIEGRMH  181 (263)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEE--------TTEEGGGCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccc--------cCCCCcccCHHHHcCCCC
Confidence            466788999999999999999999999999999999999999998775432111        112223333333333334


Q ss_pred             CCCCChHHHHHHHHHHh-hchhc
Q 013944          396 RPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       396 ~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      .+.+|+|+++-.+.+++ |..+|
T Consensus       182 ~~~~DiwSlGvilyell~G~~Pf  204 (263)
T d2j4za1         182 DEKVDLWSLGVLCYEFLVGKPPF  204 (263)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTT
T ss_pred             CchhhhhhHhHHHHHHhcCCCCC
Confidence            55666666666665554 34333

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7.1e-26  Score=215.95  Aligned_cols=150  Identities=17%  Similarity=0.166  Sum_probs=102.2

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |.-.+.||+|+||+||+|+. .+|+.||||+.+...... ......                                  
T Consensus        10 y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-~~~~~~----------------------------------   54 (288)
T d1uu3a_          10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPY----------------------------------   54 (288)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHH----------------------------------
T ss_pred             CEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccC-HHHHHH----------------------------------
Confidence            33457899999999999996 589999999875311000 000000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +.+|..-+.+    +. ++  +|.+++..+  ....+||||||+|++|.+++...+.++        +.        ...
T Consensus        55 ~~~E~~il~~----l~-Hp--nIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~--------e~--------~~~  111 (288)
T d1uu3a_          55 VTRERDVMSR----LD-HP--FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--------ET--------CTR  111 (288)
T ss_dssp             HHHHHHHHHH----CC-ST--TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCC--------HH--------HHH
T ss_pred             HHHHHHHHHH----cC-CC--CeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCC--------HH--------HHH
Confidence            1223322222    22 22  233444332  345699999999999999887654433        11        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~  366 (433)
                      .+..+++.++.|+|+.|++|||+||+||+++.+|.++|+|||+++.++...
T Consensus       112 ~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~  162 (288)
T d1uu3a_         112 FYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  162 (288)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             HHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCC
Confidence            466778899999999999999999999999999999999999999886543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.1e-26  Score=219.43  Aligned_cols=189  Identities=18%  Similarity=0.232  Sum_probs=126.1

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+.........                               .+.+      
T Consensus        11 ~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~-------------------------------~~~~------   53 (322)
T d1s9ja_          11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-------------------------------QIIR------   53 (322)
T ss_dssp             EEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHH-------------------------------HHHH------
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHH-------------------------------HHHH------
Confidence            46899999999999995 589999999986543322110                               0111      


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.    .+. ++  +|.+.+..+  .+..+|||||++|++|.+++......+        +        .....+.
T Consensus        54 Ei~il~----~l~-Hp--nIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~--------~--------~~~~~~~  110 (322)
T d1s9ja_          54 ELQVLH----ECN-SP--YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--------E--------QILGKVS  110 (322)
T ss_dssp             HGGGGG----GCC-CT--TBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCC--------H--------HHHHHHH
T ss_pred             HHHHHH----hCC-CC--CCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCC--------H--------HHHHHHH
Confidence            111111    111 12  233333322  345699999999999999987554332        1        1123466


Q ss_pred             HHHHHHHHHHHH-CCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCC
Q 013944          319 KGVEATLVQLLE-TGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       319 ~~i~~~l~~lh~-~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~  397 (433)
                      .++..++.|||+ +||+|||+||+|||++.+|+++|+|||+++.+.+.....        ..+..+.++..+..-+...+
T Consensus       111 ~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~--------~~GT~~Y~APEvl~~~~y~~  182 (322)
T d1s9ja_         111 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--------FVGTRSYMSPERLQGTHYSV  182 (322)
T ss_dssp             HHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC-----------CCSSCCCCHHHHHCSCCCT
T ss_pred             HHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCcccc--------ccCCccccCchHHcCCCCCc
Confidence            778899999997 599999999999999999999999999998775543222        12333334444444455678


Q ss_pred             CCChHHHHHHHHHHh-hchhcc
Q 013944          398 GTNTLRVTMDLEDAL-GEVEFK  418 (433)
Q Consensus       398 ~~d~~~~~~~l~~~l-~~~~~~  418 (433)
                      .+|+|+++-.+.+++ |+.+|.
T Consensus       183 ~~DiWSlGvil~ell~G~~Pf~  204 (322)
T d1s9ja_         183 QSDIWSMGLSLVEMAVGRYPIP  204 (322)
T ss_dssp             THHHHHHHHHHHHHHHSSCCSS
T ss_pred             HHHHHHHHHHHHHHHHCCCCCC
Confidence            899999888887776 566654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6e-26  Score=216.94  Aligned_cols=144  Identities=18%  Similarity=0.269  Sum_probs=100.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||.||+|+. .+|+.||||+.+..-...    .+.+                                 
T Consensus        22 Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~---------------------------------   64 (293)
T d1yhwa1          22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----KELI---------------------------------   64 (293)
T ss_dssp             BCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSC----HHHH---------------------------------
T ss_pred             cEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChH----HHHH---------------------------------
Confidence            44556899999999999995 689999999875321110    0011                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       .+|...+.+    +. +++  |.+.+..  .....+||||||+|++|.+++... +++        +.        ...
T Consensus        65 -~~E~~il~~----l~-Hpn--Iv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~-~l~--------~~--------~~~  119 (293)
T d1yhwa1          65 -INEILVMRE----NK-NPN--IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-CMD--------EG--------QIA  119 (293)
T ss_dssp             -HHHHHHHHH----CC-CTT--BCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS-CCC--------HH--------HHH
T ss_pred             -HHHHHHHHh----CC-CCC--EeeEeEEEEECCEEEEEEEecCCCcHHHHhhcc-CCC--------HH--------HHH
Confidence             123222222    22 222  3333332  235679999999999999877532 222        11        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..+++.+|.|||+.|++|||+||+|||++.+|+++|+|||+++.+..
T Consensus       120 ~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~  168 (293)
T d1yhwa1         120 AVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (293)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecc
Confidence            4677889999999999999999999999999999999999999987754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.2e-27  Score=220.97  Aligned_cols=141  Identities=21%  Similarity=0.222  Sum_probs=98.4

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+. .+|+.||||+.+........   +                                  ++.+
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~---~----------------------------------~~~~   52 (271)
T d1nvra_          10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP---E----------------------------------NIKK   52 (271)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------------------------------------CHHH
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHH---H----------------------------------HHHH
Confidence            46899999999999996 58999999987543211000   0                                  1122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +. ++  +|.+++..+  .+..+||||||+|++|.+++......+        +.+        ...+.
T Consensus        53 Ei~~l~~----l~-Hp--nIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~--------e~~--------~~~i~  109 (271)
T d1nvra_          53 EICINKM----LN-HE--NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP--------EPD--------AQRFF  109 (271)
T ss_dssp             HHHHHHT----CC-CT--TBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCC--------HHH--------HHHHH
T ss_pred             HHHHHHh----CC-CC--CEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCC--------HHH--------HHHHH
Confidence            3332222    22 22  233344332  355689999999999999986443222        211        12366


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .+++.++.|||+.|++|||+||+|||++.+|.++|+|||+++.+
T Consensus       110 ~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~  153 (271)
T d1nvra_         110 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF  153 (271)
T ss_dssp             HHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheee
Confidence            78899999999999999999999999999999999999999865

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=4.6e-25  Score=207.54  Aligned_cols=144  Identities=21%  Similarity=0.214  Sum_probs=96.5

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|+||+||+|++++|+.||||+++.+....  .                                     +|.+|
T Consensus        10 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~--~-------------------------------------~~~~E   50 (263)
T d1sm2a_          10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--E-------------------------------------DFIEE   50 (263)
T ss_dssp             EEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCH--H-------------------------------------HHHHH
T ss_pred             EEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcH--H-------------------------------------HHHHH
Confidence            45799999999999999889999999987643221  0                                     12223


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ...+.++    . +++  +.+++..  .....++||||++|++|.+++......       .++..        ...+..
T Consensus        51 ~~~l~~l----~-Hpn--Iv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~-------~~~~~--------~~~i~~  108 (263)
T d1sm2a_          51 AEVMMKL----S-HPK--LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-------FAAET--------LLGMCL  108 (263)
T ss_dssp             HHHHHHC----C-CTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTC-------CCHHH--------HHHHHH
T ss_pred             HHHHHhc----C-CCC--cccccceeccCCceEEEEEecCCCcHHHHhhccccC-------CCHHH--------HHHHHH
Confidence            3333332    1 222  2333332  235679999999999999987643211       11111        123667


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKH  366 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~  366 (433)
                      +++.+|.|+|+.|++|||+||.||+++.++.+||+|||+++.+....
T Consensus       109 qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  155 (263)
T d1sm2a_         109 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  155 (263)
T ss_dssp             HHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC---------
T ss_pred             HHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCC
Confidence            88899999999999999999999999999999999999998776543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=6.6e-25  Score=211.11  Aligned_cols=197  Identities=17%  Similarity=0.133  Sum_probs=116.1

Q ss_pred             ChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 013944          152 PVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGK  230 (433)
Q Consensus       152 ~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~  230 (433)
                      ++.+.|.  -.+.||+|+||+||+|+. .+|+.||||+..........   .                            
T Consensus         6 di~d~Y~--~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~---~----------------------------   52 (307)
T d1a06a_           6 DIRDIYD--FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE---G----------------------------   52 (307)
T ss_dssp             CGGGTEE--EEEESBSGGGGGEEEEEETTTCCEEEEEEEEC---------------------------------------
T ss_pred             CCccceE--EEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHH---H----------------------------
Confidence            4445443  346899999999999996 58999999997643221100   0                            


Q ss_pred             HhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhH
Q 013944          231 GLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLD  308 (433)
Q Consensus       231 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~  308 (433)
                            .+.+|...+.    .+. ++  +|.+++..  .....+||||||+|++|.+++.....++        +.    
T Consensus        53 ------~~~~Ei~il~----~l~-Hp--nIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~--------e~----  107 (307)
T d1a06a_          53 ------SMENEIAVLH----KIK-HP--NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT--------ER----  107 (307)
T ss_dssp             --------CHHHHHHH----TCC-CT--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCC--------HH----
T ss_pred             ------HHHHHHHHHH----hCC-CC--CCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCC--------HH----
Confidence                  0122322222    222 22  23344432  2356699999999999999987544332        21    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEc---cCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHH
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYT---SSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSL  385 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~---~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~  385 (433)
                          ....+..++..++.|||+.|++|||+||+||++.   ++|.++|+|||+++..+.....   ...    .+....+
T Consensus       108 ----~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~---~~~----~GT~~y~  176 (307)
T d1a06a_         108 ----DASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL---STA----CGTPGYV  176 (307)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------------------------CTTS
T ss_pred             ----HHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCee---eee----eeCcccc
Confidence                1234667788999999999999999999999995   4789999999999877654321   111    1222334


Q ss_pred             HHHHHhcCCCCCCCChHHHHHHHHHHh-hchhc
Q 013944          386 VHSLTEMDVVRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       386 ~~~l~~~g~~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      +..+..-+...+.+|+|+++-.+++++ |..+|
T Consensus       177 APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf  209 (307)
T d1a06a_         177 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF  209 (307)
T ss_dssp             CHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             CcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCC
Confidence            444444444566778887777776665 44444

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.6e-25  Score=210.30  Aligned_cols=150  Identities=21%  Similarity=0.348  Sum_probs=104.2

Q ss_pred             hhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 013944          153 VESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKG  231 (433)
Q Consensus       153 ~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~  231 (433)
                      +++.|+-  .+.||+|+||.||+|+. .+|+.||||+.+.......    +                             
T Consensus        10 p~d~Y~i--~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~----~-----------------------------   54 (288)
T d2jfla1          10 PEDFWEI--IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL----E-----------------------------   54 (288)
T ss_dssp             GGGTEEE--EEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGG----G-----------------------------
T ss_pred             cccCeEE--eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHH----H-----------------------------
Confidence            4554432  45799999999999996 5899999999765322210    0                             


Q ss_pred             hHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhhhH
Q 013944          232 LVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLD  308 (433)
Q Consensus       232 l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~~~  308 (433)
                           .+.+|...+.+    +. +++  |.+++..  .....+||||||+|++|.+++.... .++        +.    
T Consensus        55 -----~~~~E~~il~~----l~-Hpn--Iv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~--------e~----  110 (288)
T d2jfla1          55 -----DYMVEIDILAS----CD-HPN--IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT--------ES----  110 (288)
T ss_dssp             -----GTHHHHHHHHH----CC-CTT--BCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCC--------HH----
T ss_pred             -----HHHHHHHHHHh----CC-CCC--CCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCC--------HH----
Confidence                 11223333322    22 222  2333332  2356789999999999999876432 222        11    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          309 AKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       309 ~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                          ....+..+++.+|.|||+.||+|||+||+|||++.+|.++|+|||++..+...
T Consensus       111 ----~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~  163 (288)
T d2jfla1         111 ----QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT  163 (288)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH
T ss_pred             ----HHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC
Confidence                12346778899999999999999999999999999999999999999877554

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=5.4e-25  Score=212.53  Aligned_cols=185  Identities=15%  Similarity=0.179  Sum_probs=116.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+.+...... ....+.                                  +.
T Consensus         8 i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~-~~~~~~----------------------------------~~   52 (316)
T d1fota_           8 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR-LKQVEH----------------------------------TN   52 (316)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHH----------------------------------HH
T ss_pred             EEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccC-HHHHHH----------------------------------HH
Confidence            357899999999999996 589999999976321100 000000                                  12


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|..-+    ..+. ++  +|.+++..  .....++|||||+|+++.+++......+        +        .....+
T Consensus        53 ~E~~il----~~l~-Hp--nIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~--------~--------~~~~~~  109 (316)
T d1fota_          53 DERLML----SIVT-HP--FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP--------N--------PVAKFY  109 (316)
T ss_dssp             HHHHHH----HSCC-BT--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCC--------H--------HHHHHH
T ss_pred             HHHHHH----Hhcc-Cc--ChhheeeeEeeCCeeeeEeeecCCcccccccccccccc--------c--------cHHHHH
Confidence            232222    2222 22  23344433  2356699999999999998887554332        1        112345


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~  397 (433)
                      ..+++.++.++|+.|++|||+||+|||++.+|.++|+|||+++.+.....         ...+....++..++.-....+
T Consensus       110 ~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~---------~~~Gt~~Y~APE~l~~~~y~~  180 (316)
T d1fota_         110 AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY---------TLCGTPDYIAPEVVSTKPYNK  180 (316)
T ss_dssp             HHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC---------CCCSCTTTCCHHHHTTCCBCT
T ss_pred             HHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccc---------cccCcccccCHHHHcCCCCCc
Confidence            67788999999999999999999999999999999999999987754221         011222233333333233344


Q ss_pred             CCChHHHHHHHHHHh
Q 013944          398 GTNTLRVTMDLEDAL  412 (433)
Q Consensus       398 ~~d~~~~~~~l~~~l  412 (433)
                      .+|+|+++-.+++++
T Consensus       181 ~~DiwSlGvilyeml  195 (316)
T d1fota_         181 SIDWWSFGILIYEML  195 (316)
T ss_dssp             THHHHHHHHHHHHHH
T ss_pred             hhhccccchhHHHHH
Confidence            555555555555444

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=2.3e-25  Score=212.33  Aligned_cols=171  Identities=19%  Similarity=0.164  Sum_probs=113.2

Q ss_pred             CccccccccceeEEEEec-CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+.+ +|+.||||+.+.+....     +-                                  |.+
T Consensus        22 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-----~~----------------------------------~~~   62 (287)
T d1opja_          22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-----EE----------------------------------FLK   62 (287)
T ss_dssp             EEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCH-----HH----------------------------------HHH
T ss_pred             eeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchH-----HH----------------------------------HHH
Confidence            467999999999999974 78999999987543221     00                                  122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |.+.+.++    . +++  |.+.+..  .....++|||||+|++|.+++.......      .++.        ....+.
T Consensus        63 E~~il~~l----~-Hpn--Iv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~------~~~~--------~~~~i~  121 (287)
T d1opja_          63 EAAVMKEI----K-HPN--LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VSAV--------VLLYMA  121 (287)
T ss_dssp             HHHHHHHC----C-CTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTT------SCHH--------HHHHHH
T ss_pred             HHHHHHhC----C-CCC--EecCCccEeeCCeeEEEeecccCcchHHHhhhccccc------hHHH--------HHHHHH
Confidence            33333222    2 222  2333332  2356699999999999999886532211      1111        112356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH--------------HHHHHHHHHHHhcCHHH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ--------------FAMLASIVHIVNGDWQS  384 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~--------------~~~~~~~~~~~~~d~~~  384 (433)
                      .+++.||.|||+.||+|||+||+|||++.+|.+||+|||+++.+.....              +..+..-......|.|+
T Consensus       122 ~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS  201 (287)
T d1opja_         122 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA  201 (287)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhh
Confidence            7889999999999999999999999999999999999999987643211              11111111133567788


Q ss_pred             HHHHHHhc
Q 013944          385 LVHSLTEM  392 (433)
Q Consensus       385 ~~~~l~~~  392 (433)
                      ++-.+++|
T Consensus       202 ~Gv~l~el  209 (287)
T d1opja_         202 FGVLLWEI  209 (287)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88877776

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=6.2e-25  Score=211.45  Aligned_cols=154  Identities=20%  Similarity=0.221  Sum_probs=104.4

Q ss_pred             CChhhhccccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 013944          151 SPVESFFSFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELG  229 (433)
Q Consensus       151 ~~~~~~f~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~  229 (433)
                      .++++.|+.  .+.||+|+||.||+|+. .+|+.||||+.+......- ...+.                          
T Consensus        11 ~dp~~~y~~--l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~-~~~~~--------------------------   61 (309)
T d1u5ra_          11 DDPEKLFSD--LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN-EKWQD--------------------------   61 (309)
T ss_dssp             SCHHHHEEE--EEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHH-HHHHH--------------------------
T ss_pred             cCcHHhcEe--eEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCH-HHHHH--------------------------
Confidence            345666543  46899999999999995 5899999998765432210 01111                          


Q ss_pred             HHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhh
Q 013944          230 KGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKL  307 (433)
Q Consensus       230 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~  307 (433)
                              +.+|...+.+    +. +++  |.+++..  .....+||||||+|+++..+......++        +.+  
T Consensus        62 --------~~~Ei~il~~----l~-Hpn--Iv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~--------e~~--  116 (309)
T d1u5ra_          62 --------IIKEVRFLQK----LR-HPN--TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ--------EVE--  116 (309)
T ss_dssp             --------HHHHHHHHTT----CC-CTT--BCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCC--------HHH--
T ss_pred             --------HHHHHHHHHH----CC-CCC--EeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCC--------HHH--
Confidence                    1223322222    22 222  2233332  2356799999999999876665443332        111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                            ...+..+++.||.|||+.|++|||+||+|||++.+|.++|+|||++.....
T Consensus       117 ------~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_         117 ------IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             ------HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             ------HHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence                  124667889999999999999999999999999999999999999987654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=5.4e-25  Score=214.28  Aligned_cols=146  Identities=16%  Similarity=0.156  Sum_probs=101.5

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      -.+.||+|+||+||+|+. .+|+.||||+.+...... ..+...                                  +.
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~-~~~~~~----------------------------------~~   53 (337)
T d1o6la_           9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEVAH----------------------------------TV   53 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHH----------------------------------HH
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC-HHHHHH----------------------------------HH
Confidence            356899999999999996 589999999986321000 000000                                  12


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|...+.    .+. ++  .|.+++..+  ....++|||||+|++|.+++......+        +.        ....+
T Consensus        54 ~E~~il~----~l~-hp--~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~--------e~--------~~~~~  110 (337)
T d1o6la_          54 TESRVLQ----NTR-HP--FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE--------RARFY  110 (337)
T ss_dssp             HHHHHHH----SCC-CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCC--------HH--------HHHHH
T ss_pred             HHHHHHH----hCC-CC--CEEEEEeeeccccccccceeccCCCchhhhhhcccCCc--------HH--------HHHHH
Confidence            2322221    222 22  234444332  345699999999999999987654433        11        12346


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..++..++.|+|+.|++|||+||+|||++.+|.++|+|||+++.+..
T Consensus       111 ~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_         111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             HHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            67888999999999999999999999999999999999999987643

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.3e-25  Score=207.63  Aligned_cols=172  Identities=19%  Similarity=0.188  Sum_probs=113.2

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|+||.||+|++++|+.||||+.+.+....     +                                  .|.+|
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-----~----------------------------------~~~~E   58 (272)
T d1qpca_          18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-----D----------------------------------AFLAE   58 (272)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH-----H----------------------------------HHHHH
T ss_pred             eEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCH-----H----------------------------------HHHHH
Confidence            46799999999999999888999999987543211     0                                  01223


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKG  320 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~  320 (433)
                      ...+.++    .+ ++  |.+.+.. .....+|||||++|++|.+++....+            ..+.....  ..+..+
T Consensus        59 ~~~l~~l----~H-pn--Iv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~------------~~l~~~~~--~~i~~q  117 (272)
T d1qpca_          59 ANLMKQL----QH-QR--LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------------IKLTINKL--LDMAAQ  117 (272)
T ss_dssp             HHHHHHC----CC-TT--BCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHH------------HTCCHHHH--HHHHHH
T ss_pred             HHHHHhC----CC-CC--EeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCC------------CCCCHHHH--HHHHHH
Confidence            3333222    22 22  2233332 23456999999999999987653321            11112211  235677


Q ss_pred             HHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH--------------HHHHHHHHHHHhcCHHHHH
Q 013944          321 VEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ--------------FAMLASIVHIVNGDWQSLV  386 (433)
Q Consensus       321 i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~--------------~~~~~~~~~~~~~d~~~~~  386 (433)
                      ++.++.|||+.|++|||+||+|||++.++.++|+|||+++.+.....              +..+..-......|.|+++
T Consensus       118 i~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~G  197 (272)
T d1qpca_         118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFG  197 (272)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHH
T ss_pred             HHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhH
Confidence            88999999999999999999999999999999999999987643210              1111111113345788888


Q ss_pred             HHHHhcC
Q 013944          387 HSLTEMD  393 (433)
Q Consensus       387 ~~l~~~g  393 (433)
                      -.+++|-
T Consensus       198 vvl~ell  204 (272)
T d1qpca_         198 ILLTEIV  204 (272)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8777763

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.88  E-value=8.3e-25  Score=214.29  Aligned_cols=144  Identities=19%  Similarity=0.267  Sum_probs=99.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+.....    +...+                                  .
T Consensus        33 i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~----~~~~~----------------------------------~   74 (352)
T d1koba_          33 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL----DKYTV----------------------------------K   74 (352)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----HHHHH----------------------------------H
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchh----HHHHH----------------------------------H
Confidence            457899999999999995 58999999987654221    11111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|...+.+    +. ++  +|.+++..  .....+||||||+|++|.+.+.....       .+++.+        ...+
T Consensus        75 ~Ei~il~~----l~-Hp--nIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~-------~l~e~~--------~~~i  132 (352)
T d1koba_          75 NEISIMNQ----LH-HP--KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-------KMSEAE--------VINY  132 (352)
T ss_dssp             HHHHHHTT----CC-ST--TBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTC-------CBCHHH--------HHHH
T ss_pred             HHHHHHHh----CC-CC--CCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCC-------CCCHHH--------HHHH
Confidence            23222211    21 12  23334433  23566999999999999887653321       112221        1236


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEc--cCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYT--SSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~--~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.+|.|||+.|++|||+||+|||++  .+|+++|+|||++..+..
T Consensus       133 ~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~  181 (352)
T d1koba_         133 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  181 (352)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             HHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCC
Confidence            67788999999999999999999999997  568999999999987754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=4.7e-24  Score=204.36  Aligned_cols=145  Identities=23%  Similarity=0.266  Sum_probs=92.0

Q ss_pred             CccccccccceeEEEEec-CCC---EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGSTL-DGS---IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~---~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|+||+||+|+.+ +|+   .||||...+........+                                     
T Consensus        31 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~-------------------------------------   73 (299)
T d1jpaa_          31 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-------------------------------------   73 (299)
T ss_dssp             EEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHH-------------------------------------
T ss_pred             eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHH-------------------------------------
Confidence            568999999999999964 443   689998876544321111                                     


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      |.+|+..+.+    +. ++  +|.+++..  .....++|||||+|++|.+++....+.       +++.      ..  .
T Consensus        74 ~~~E~~~l~~----l~-Hp--nIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~-------l~~~------~~--~  131 (299)
T d1jpaa_          74 FLSEASIMGQ----FD-HP--NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-------FTVI------QL--V  131 (299)
T ss_dssp             HHHHHHHHTT----CC-CT--TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTC-------SCHH------HH--H
T ss_pred             HHHHHHHHHh----CC-CC--CCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCC-------CCHH------HH--H
Confidence            1223332221    21 22  23333432  235679999999999999987653221       1111      11  2


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      .+..+++.+|.|||+.|++|||+||+|||++.++.+||+|||+++.+...
T Consensus       132 ~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  181 (299)
T d1jpaa_         132 GMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD  181 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             HHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCC
Confidence            35677899999999999999999999999999999999999999887654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=9.9e-24  Score=199.00  Aligned_cols=149  Identities=16%  Similarity=0.199  Sum_probs=93.2

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+. .+|+.||||+.+......  .+.+.+                                  .+
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~----------------------------------~~   52 (269)
T d2java1           9 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE--AEKQML----------------------------------VS   52 (269)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCH--HHHHHH----------------------------------HH
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCH--HHHHHH----------------------------------HH
Confidence            46899999999999995 589999999886543221  111111                                  22


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      |.+.+       ....+-+|.+++..+    ....++|||||+|++|.+++.......    ..+++.        ....
T Consensus        53 E~~il-------~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~----~~l~e~--------~~~~  113 (269)
T d2java1          53 EVNLL-------RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKER----QYLDEE--------FVLR  113 (269)
T ss_dssp             HHHHT-------TSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHT----CCCCHH--------HHHH
T ss_pred             HHHHH-------HHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccC----CCCCHH--------HHHH
Confidence            33222       111222334444322    244689999999999999886421000    001111        1224


Q ss_pred             HHHHHHHHHHHHHHCC-----ccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          317 VNKGVEATLVQLLETG-----ILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~g-----ivH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +..+++.+|.|||+.|     ++|||+||+|||++.+|.++|+|||+++.+...
T Consensus       114 i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  167 (269)
T d2java1         114 VMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD  167 (269)
T ss_dssp             HHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccC
Confidence            6677889999999976     999999999999999999999999999987654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.3e-24  Score=201.56  Aligned_cols=145  Identities=18%  Similarity=0.206  Sum_probs=100.0

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      -.+.||+|+||+||+|++++++.||||+++.+....     .                                  +|.+
T Consensus        21 i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~-----~----------------------------------~~~~   61 (285)
T d1fmka3          21 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-----E----------------------------------AFLQ   61 (285)
T ss_dssp             EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCH-----H----------------------------------HHHH
T ss_pred             EeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCH-----H----------------------------------HHHH
Confidence            456899999999999999888899999987543211     0                                  1233


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |+..+.++    .+ +  +|.+++.. ...+.++||||++|+++.+++.....            ..+++...  ..+..
T Consensus        62 E~~~l~~l----~h-~--nIv~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~------------~~l~~~~~--~~i~~  120 (285)
T d1fmka3          62 EAQVMKKL----RH-E--KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETG------------KYLRLPQL--VDMAA  120 (285)
T ss_dssp             HHHHHHHC----CC-T--TBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHH------------TTCCHHHH--HHHHH
T ss_pred             HHHHHHhc----cc-C--CEeEEEEEEecCCeEEEEEecCCCchhhhhhhccc------------ccchHHHH--HHHHH
Confidence            44444332    22 2  23333332 23567999999999999988764321            01112221  23677


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +++.++.+||..|++|+|+||.|||++.+|.++|+|||+++.+.+.
T Consensus       121 ~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~  166 (285)
T d1fmka3         121 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  166 (285)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             HHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCC
Confidence            8899999999999999999999999999999999999999876543

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.87  E-value=3.4e-23  Score=203.67  Aligned_cols=194  Identities=15%  Similarity=0.139  Sum_probs=122.4

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+..+.....-..+                                   ..+.
T Consensus         8 i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~-----------------------------------~~~~   52 (364)
T d1omwa3           8 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------------------------------TLAL   52 (364)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCH-----------------------------------HHHH
T ss_pred             eeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHH-----------------------------------HHHH
Confidence            356899999999999996 5899999999753211000000                                   0001


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|.. .   ...++...+-.|.+++..  .....+||||||+|++|.+++......+        +.        ....+
T Consensus        53 ~e~~-~---~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~--------e~--------~~~~~  112 (364)
T d1omwa3          53 NERI-M---LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS--------EA--------DMRFY  112 (364)
T ss_dssp             HHHH-H---HHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCC--------HH--------HHHHH
T ss_pred             HHHH-H---HHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhccccc--------HH--------HHHHH
Confidence            1111 1   112222222233344433  2356799999999999999987554322        11        12346


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcC-CCC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMD-VVR  396 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g-~~~  396 (433)
                      ..+++.+|.|||+.|++|||+||+|||++.+|.++|+|||+++.+......        ...+....++...+.-| ...
T Consensus       113 ~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~--------~~~GT~~y~APE~~~~~~~~~  184 (364)
T d1omwa3         113 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH--------ASVGTHGYMAPEVLQKGVAYD  184 (364)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCC--------SCCSCGGGCCHHHHSTTCCCC
T ss_pred             HHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCccc--------ccccccccchhHHhhcCCCCC
Confidence            677889999999999999999999999999999999999999877543211        11233444444444333 235


Q ss_pred             CCCChHHHHHHHHHHh-hchhc
Q 013944          397 PGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       397 ~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      +.+|+|+++-.+++++ |..+|
T Consensus       185 ~~~DiwSlGvilyemltG~~Pf  206 (364)
T d1omwa3         185 SSADWFSLGCMLFKLLRGHSPF  206 (364)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSS
T ss_pred             cccchhHHHHHHHHHHhCCCCC
Confidence            5567776666666665 44444

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.8e-24  Score=205.28  Aligned_cols=188  Identities=15%  Similarity=0.160  Sum_probs=115.9

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHH--HHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVV--RDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~--~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+........  ...+.                                  
T Consensus        14 ~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~----------------------------------   59 (293)
T d1jksa_          14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----------------------------------   59 (293)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHH----------------------------------
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHH----------------------------------
Confidence            346899999999999996 58999999987532211000  00000                                  


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      +.+|...+.++    . ++  +|.+++..  .....+||||||+|++|.+++.....++        +.        ...
T Consensus        60 ~~~E~~il~~l----~-Hp--nIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~--------~~--------~~~  116 (293)
T d1jksa_          60 IEREVSILKEI----Q-HP--NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT--------EE--------EAT  116 (293)
T ss_dssp             HHHHHHHHHHC----C-CT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCC--------HH--------HHH
T ss_pred             HHHHHHHHHhC----C-CC--CCCcEEEEEEECCEEEEEEEcCCCccccchhccccccc--------hh--------HHH
Confidence            12222222221    1 22  23333332  2355699999999999999987654333        11        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCC----cEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHh
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSG----QIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTE  391 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g----~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~  391 (433)
                      .+..++..++.|||+.|++|||+||.||+++.+|    .++++|||++..+.......       ...+....++..+..
T Consensus       117 ~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~-------~~~~t~~y~APE~~~  189 (293)
T d1jksa_         117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK-------NIFGTPEFVAPEIVN  189 (293)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCS-------CCCCCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCcccc-------ccCCCCcccCHHHHc
Confidence            4567788999999999999999999999998776    59999999998775432110       011122233333333


Q ss_pred             cCCCCCCCChHHHHHHHHHHh
Q 013944          392 MDVVRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       392 ~g~~~~~~d~~~~~~~l~~~l  412 (433)
                      -+...+..|+|+++-.+.+++
T Consensus       190 ~~~~~~~~DiwSlGvilyell  210 (293)
T d1jksa_         190 YEPLGLEADMWSIGVITYILL  210 (293)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcccchhhhHHHHHHH
Confidence            334455556666665555554

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.3e-24  Score=203.93  Aligned_cols=141  Identities=18%  Similarity=0.158  Sum_probs=98.5

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .+.||+|+||.||+|+.++++.||||+++.+....  .                                     +|.+|
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~--~-------------------------------------~~~~E   49 (258)
T d1k2pa_           9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--D-------------------------------------EFIEE   49 (258)
T ss_dssp             CCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCH--H-------------------------------------HHHHH
T ss_pred             eEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCH--H-------------------------------------HHHHH
Confidence            46899999999999999889999999987542210  0                                     11223


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ...+.+    +.+ +  +|.+.+..  .....++||||++++++.+++......       .++      .. . ..+..
T Consensus        50 v~~~~~----l~H-p--nIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~-------~~~------~~-~-~~i~~  107 (258)
T d1k2pa_          50 AKVMMN----LSH-E--KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-------FQT------QQ-L-LEMCK  107 (258)
T ss_dssp             HHHHHT----CCC-T--TBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGC-------CCH------HH-H-HHHHH
T ss_pred             HHHHHh----cCC-C--ceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccC-------CcH------HH-H-HHHHH
Confidence            322222    222 2  12233322  235669999999999999886543211       011      11 1 23567


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +++.++.|||+.|++|+|+||+||+++.++.++|+|||+++.+.
T Consensus       108 qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~  151 (258)
T d1k2pa_         108 DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  151 (258)
T ss_dssp             HHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCS
T ss_pred             HHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheecc
Confidence            88999999999999999999999999999999999999997654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.87  E-value=3.3e-23  Score=196.24  Aligned_cols=184  Identities=15%  Similarity=0.113  Sum_probs=120.6

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhH-HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVV-VRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~-~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+.+....... ..+.+.++                        .      .+
T Consensus         7 ~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~------------------------~------~~   56 (277)
T d1phka_           7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELR------------------------E------AT   56 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHH------------------------H------HH
T ss_pred             EceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHH------------------------H------HH
Confidence            356899999999999996 5899999998764322110 11111111                        0      11


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      .+|...+.++.    .+++  +.+++..  -....+||||||+|++|.+++....+.+        +.        ....
T Consensus        57 ~~E~~~l~~l~----~hpn--Iv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~--------e~--------~~~~  114 (277)
T d1phka_          57 LKEVDILRKVS----GHPN--IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS--------EK--------ETRK  114 (277)
T ss_dssp             HHHHHHHHHHT----TCTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCC--------HH--------HHHH
T ss_pred             HHHHHHHHHhc----CCCC--eEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCC--------HH--------HHHH
Confidence            33444444432    2222  2333332  2355699999999999999997654433        11        1234


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH------------HHHHHHHHH------HH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ------------FAMLASIVH------IV  378 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~------------~~~~~~~~~------~~  378 (433)
                      +..+++.++.+||+.|++|||+||+||+++.+|.++|+|||++..+++...            ...+.....      ..
T Consensus       115 ~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~  194 (277)
T d1phka_         115 IMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK  194 (277)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCT
T ss_pred             HHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCc
Confidence            677889999999999999999999999999999999999999987754211            111111000      11


Q ss_pred             hcCHHHHHHHHHhcCCCC
Q 013944          379 NGDWQSLVHSLTEMDVVR  396 (433)
Q Consensus       379 ~~d~~~~~~~l~~~g~~~  396 (433)
                      ..|.|+++..+++|-...
T Consensus       195 ~~DiwslGvilyeml~g~  212 (277)
T d1phka_         195 EVDMWSTGVIMYTLLAGS  212 (277)
T ss_dssp             HHHHHHHHHHHHHHHHSS
T ss_pred             hheEcccchhhhhhccCC
Confidence            358899999888875443

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=4.5e-24  Score=208.86  Aligned_cols=146  Identities=18%  Similarity=0.192  Sum_probs=101.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+.+.....    +..                 ...              .+.
T Consensus        45 i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~----~~~-----------------~~~--------------~~~   89 (350)
T d1rdqe_          45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV----KLK-----------------QIE--------------HTL   89 (350)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH----HTT-----------------CHH--------------HHH
T ss_pred             EEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHcc----CHH-----------------HHH--------------HHH
Confidence            346899999999999996 58999999987531100    000                 000              012


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|.+.+.    .+. ++  .|.+.+..  .....++||||+.|++|.+.+.....++        +.        ....+
T Consensus        90 ~E~~il~----~l~-hp--nIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~--------e~--------~~~~i  146 (350)
T d1rdqe_          90 NEKRILQ----AVN-FP--FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFS--------EP--------HARFY  146 (350)
T ss_dssp             HHHHHHT----TCC-CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCC--------HH--------HHHHH
T ss_pred             HHHHHHH----HcC-CC--cEeecccccccccccccccccccccchhhhHhhcCCCC--------HH--------HHHHH
Confidence            2322221    121 22  23333332  3356689999999999999887654332        11        12346


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+++.+|.|||+.|++|||+||+|||++.+|.++|+|||+++.+..
T Consensus       147 ~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~  193 (350)
T d1rdqe_         147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             HHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeeccc
Confidence            67888999999999999999999999999999999999999988754

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=7.3e-23  Score=193.70  Aligned_cols=188  Identities=15%  Similarity=0.179  Sum_probs=113.4

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      -.+.||+|+||.||+|+++  ..||||+.+......  .+.+.                                  |.+
T Consensus        12 ~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~--~~~~~----------------------------------~~~   53 (276)
T d1uwha_          12 VGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTP--QQLQA----------------------------------FKN   53 (276)
T ss_dssp             CCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCT--THHHH----------------------------------HHH
T ss_pred             EEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCH--HHHHH----------------------------------HHH
Confidence            4568999999999999863  469999987543211  01111                                  122


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |+..+.+    +. +++  |.+.+.. .....+||||||+|++|.+++...++.       +++..        ...+..
T Consensus        54 E~~~l~~----l~-Hpn--Iv~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~-------~~~~~--------~~~i~~  111 (276)
T d1uwha_          54 EVGVLRK----TR-HVN--ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK-------FEMIK--------LIDIAR  111 (276)
T ss_dssp             HHHHHTT----CC-CTT--BCCEEEEECSSSCEEEEECCCEEEHHHHHHTSCCC-------CCHHH--------HHHHHH
T ss_pred             HHHHHHh----CC-CCC--EeeeeEEEeccEEEEEEecCCCCCHHHHHhhccCC-------CCHHH--------HHHHHH
Confidence            3333322    21 222  2233322 235579999999999999998643221       11111        123567


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhc---CCCC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEM---DVVR  396 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---g~~~  396 (433)
                      +++.+|.|||+.|++|||+||.|||++.++.+||+|||+++............    ...+....++..+...   +...
T Consensus       112 qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~----~~~gt~~y~APE~l~~~~~~~~~  187 (276)
T d1uwha_         112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDKNPYS  187 (276)
T ss_dssp             HHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC----------------CCCCGGGCCHHHHTTCSSCCCC
T ss_pred             HHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCccccc----ccccCcccCCHHHHhcccCCCCC
Confidence            88999999999999999999999999999999999999998776543322111    1223333344444321   2234


Q ss_pred             CCCChHHHHHHHHHHh
Q 013944          397 PGTNTLRVTMDLEDAL  412 (433)
Q Consensus       397 ~~~d~~~~~~~l~~~l  412 (433)
                      ..+|+++|+-.+.+++
T Consensus       188 ~~sDiwS~Gv~l~el~  203 (276)
T d1uwha_         188 FQSDVYAFGIVLYELM  203 (276)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             chhhhhhhHHHHHHHH
Confidence            4556777666666665

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.87  E-value=3.7e-24  Score=209.48  Aligned_cols=174  Identities=18%  Similarity=0.173  Sum_probs=113.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||+||+|+. .+|+.||||+.......    +...+                                  .
T Consensus        30 i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~----~~~~~----------------------------------~   71 (350)
T d1koaa2          30 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----DKETV----------------------------------R   71 (350)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHH----HHHHH----------------------------------H
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchh----hHHHH----------------------------------H
Confidence            456899999999999996 58999999988654221    11111                                  2


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      +|...+.++    .+ ++  |.+++..  .....+||||||+|++|.+++....+       .+++.        ....+
T Consensus        72 ~E~~il~~l----~H-pn--Iv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~-------~l~e~--------~~~~i  129 (350)
T d1koaa2          72 KEIQTMSVL----RH-PT--LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-------KMSED--------EAVEY  129 (350)
T ss_dssp             HHHHHHHHT----CC-TT--BCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTS-------CBCHH--------HHHHH
T ss_pred             HHHHHHHhC----CC-CC--CCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcC-------CCCHH--------HHHHH
Confidence            233333222    22 22  2333322  24567999999999999998853321       11121        12346


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEcc--CCcEEEEecccccccCHHHH------------HHHHHHHHHHHhcCHH
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTS--SGQIGFLDFGLLCRMERKHQ------------FAMLASIVHIVNGDWQ  383 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~--~g~l~l~DFGl~~~l~~~~~------------~~~~~~~~~~~~~d~~  383 (433)
                      ..+++.+|.|||+.|++|||+||+|||++.  +|.++|+|||+++.++....            +.++..-......|.|
T Consensus       130 ~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~Diw  209 (350)
T d1koaa2         130 MRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMW  209 (350)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhh
Confidence            778899999999999999999999999964  58999999999987754321            1111111112345777


Q ss_pred             HHHHHHHhcCC
Q 013944          384 SLVHSLTEMDV  394 (433)
Q Consensus       384 ~~~~~l~~~g~  394 (433)
                      +++..+++|-.
T Consensus       210 SlGvilyell~  220 (350)
T d1koaa2         210 SVGVLSYILLS  220 (350)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhhHHHHHHHh
Confidence            77777776643

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=9.3e-24  Score=204.14  Aligned_cols=146  Identities=18%  Similarity=0.211  Sum_probs=100.3

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      -.+.||+|+||+||+|+. .+|+.||||+.+++.... ..+...                                  +.
T Consensus         6 i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~-~~~~~~----------------------------------~~   50 (320)
T d1xjda_           6 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVEC----------------------------------TM   50 (320)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHH----------------------------------HH
T ss_pred             EeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC-hHHHHH----------------------------------HH
Confidence            357899999999999996 589999999986321100 000000                                  01


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      .|..-+   ...+. +++  |.+.+..  .....+|||||++|++|.+++......+        +.        ....+
T Consensus        51 ~e~~~l---~~~~~-hp~--Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~--------e~--------~~~~~  108 (320)
T d1xjda_          51 VEKRVL---SLAWE-HPF--LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD--------LS--------RATFY  108 (320)
T ss_dssp             HHHHHH---HHHTT-CTT--BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCC--------HH--------HHHHH
T ss_pred             HHHHHH---HHhCC-CCc--EEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCC--------HH--------HHHHH
Confidence            111111   11121 222  3333332  2355799999999999999987654433        11        12346


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..+++.+|.|||+.|++|||+||.|||++.+|.++++|||+++...
T Consensus       109 ~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~  154 (320)
T d1xjda_         109 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM  154 (320)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             HHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcc
Confidence            6788899999999999999999999999999999999999998654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.7e-23  Score=195.15  Aligned_cols=145  Identities=17%  Similarity=0.215  Sum_probs=98.6

Q ss_pred             cCCccccccccceeEEEEec---CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          160 ISEEPVAAASFGQVYRGSTL---DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l~---~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      ++++.||+|+||+||+|+++   +++.||||+.+......-.  ..                                  
T Consensus        10 le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~--~~----------------------------------   53 (277)
T d1xbba_          10 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL--KD----------------------------------   53 (277)
T ss_dssp             EEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHH--HH----------------------------------
T ss_pred             ecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHH--HH----------------------------------
Confidence            44567999999999999864   4578999998653322100  00                                  


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      .|.+|+..+.+    +. +++  |.+.+.. .....+|||||++|++|.+++.....++        +..        ..
T Consensus        54 ~~~~E~~il~~----l~-Hpn--Iv~~~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~l~--------~~~--------~~  110 (277)
T d1xbba_          54 ELLAEANVMQQ----LD-NPY--IVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVK--------DKN--------II  110 (277)
T ss_dssp             HHHHHHHHHHT----CC-CTT--BCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCC--------HHH--------HH
T ss_pred             HHHHHHHHHHh----CC-CCC--CceEEEEeccCCEEEEEEcCCCCcHHHHHhhccCCC--------HHH--------HH
Confidence            12234333322    22 222  2233322 2345689999999999999987544332        111        12


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      .+..+++.+|.|||+.|++|||+||.||+++.+|.++++|||+++.+.
T Consensus       111 ~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~  158 (277)
T d1xbba_         111 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR  158 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             HHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcc
Confidence            356778999999999999999999999999999999999999998654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-23  Score=203.78  Aligned_cols=177  Identities=16%  Similarity=0.113  Sum_probs=115.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.+....+.     ..+                                 
T Consensus         7 Y~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~-----~~~---------------------------------   48 (321)
T d1tkia_           7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ-----VLV---------------------------------   48 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH-----HHH---------------------------------
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccH-----HHH---------------------------------
Confidence            34467899999999999996 589999999987543221     011                                 


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                       .+|...+.+    +.+ ++  |.+++..  ..+..+||||||+|++|.+++.....       .+++.+        ..
T Consensus        49 -~~Ei~il~~----l~H-pn--Iv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~-------~l~e~~--------~~  105 (321)
T d1tkia_          49 -KKEISILNI----ARH-RN--ILHLHESFESMEELVMIFEFISGLDIFERINTSAF-------ELNERE--------IV  105 (321)
T ss_dssp             -HHHHHHHHH----SCC-TT--BCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSC-------CCCHHH--------HH
T ss_pred             -HHHHHHHHh----CCC-CC--CCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCC-------CCCHHH--------HH
Confidence             123222222    222 22  3333332  24667999999999999998864321       112221        23


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccC--CcEEEEecccccccCHHHH------------HHHHHHHHHHHhcC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSS--GQIGFLDFGLLCRMERKHQ------------FAMLASIVHIVNGD  381 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~--g~l~l~DFGl~~~l~~~~~------------~~~~~~~~~~~~~d  381 (433)
                      .+..+++.++.|||+.|++|||+||.|||++.+  ++++++|||++........            .............|
T Consensus       106 ~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~D  185 (321)
T d1tkia_         106 SYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD  185 (321)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhh
Confidence            466778899999999999999999999999854  5899999999987643211            11111001123458


Q ss_pred             HHHHHHHHHhcCCCC
Q 013944          382 WQSLVHSLTEMDVVR  396 (433)
Q Consensus       382 ~~~~~~~l~~~g~~~  396 (433)
                      .|+++..+++|-...
T Consensus       186 iWSlGvily~ll~G~  200 (321)
T d1tkia_         186 MWSLGTLVYVLLSGI  200 (321)
T ss_dssp             HHHHHHHHHHHHHSS
T ss_pred             cccHHHHHHHHHhCC
Confidence            888888888865433

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=1.3e-22  Score=191.88  Aligned_cols=199  Identities=20%  Similarity=0.185  Sum_probs=120.1

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.++.....-.. ..                                  .+.
T Consensus        11 i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~-~~----------------------------------~~~   55 (277)
T d1o6ya_          11 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSF-YL----------------------------------RFR   55 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHH-HH----------------------------------HHH
T ss_pred             EeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHH-HH----------------------------------HHH
Confidence            457899999999999995 689999999987654321100 00                                  112


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeeccc---CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRYL---SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      +|.+.+.+    +.+.+-+.+-.++...   ....+|||||++|++|.+++...+.++        +.+        ...
T Consensus        56 ~E~~~l~~----~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~--------~~~--------~~~  115 (277)
T d1o6ya_          56 REAQNAAA----LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--------PKR--------AIE  115 (277)
T ss_dssp             HHHHHHHT----CCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCC--------HHH--------HHH
T ss_pred             HHHHHHHh----cCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCC--------HHH--------HHH
Confidence            34333322    2222212222222211   123589999999999998886554332        111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVR  396 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~  396 (433)
                      +..+++.++.+||+.|++|||+||+||+++.++.++++|||.+.............   ....+....++.....-+...
T Consensus       116 i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~---~~~~Gt~~Y~aPE~~~~~~~~  192 (277)
T d1o6ya_         116 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT---AAVIGTAQYLSPEQARGDSVD  192 (277)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC-------------------TTCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhcccccccccc---ccccCcccccCHHHHcCCCCC
Confidence            56778899999999999999999999999999999999999988765432211110   011122333344444444445


Q ss_pred             CCCChHHHHHHHHHHh-hchhc
Q 013944          397 PGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       397 ~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      +.+|+|+++..+.+++ |..+|
T Consensus       193 ~~~DiwSlGvilyelltG~~Pf  214 (277)
T d1o6ya_         193 ARSDVYSLGCVLYEVLTGEPPF  214 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSC
T ss_pred             cceecccchHHHHHHHhCCCCC
Confidence            5677777777666665 44433

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.9e-23  Score=197.01  Aligned_cols=160  Identities=16%  Similarity=0.122  Sum_probs=92.3

Q ss_pred             CCccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHh
Q 013944          161 SEEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVG  234 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  234 (433)
                      ..+.||+|+||+||+|+..      +++.||||+.+.+......   +.                               
T Consensus        17 ~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~---~~-------------------------------   62 (299)
T d1ywna1          17 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH---RA-------------------------------   62 (299)
T ss_dssp             EEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHH---HH-------------------------------
T ss_pred             EeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHH---HH-------------------------------
Confidence            3568999999999999852      4578999998754322110   00                               


Q ss_pred             hhchHHHHHHHHHHHHhcCCCCCe-EeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCC-C-CchhhhhhhHHHH
Q 013944          235 ELDYTLEAANASEFQESHSPFPFI-HVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDG-S-STHLDRQKLDAKW  311 (433)
Q Consensus       235 Eld~~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~  311 (433)
                         +..|...+.++    .+++.+ ..-.....-....++|||||+|++|.+++.......... . ........+....
T Consensus        63 ---~~~e~~~l~~~----~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~  135 (299)
T d1ywna1          63 ---LMSELKILIHI----GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH  135 (299)
T ss_dssp             ---HHHHHHHHHHH----CCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHH
T ss_pred             ---HHHHHHHHHhh----cCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHH
Confidence               11122222222    223322 222222222345699999999999999987543211000 0 0000001111111


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                        ...+..+++.++.|||+.|++|||+||+|||++.+|.+||+|||+++...
T Consensus       136 --~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~  185 (299)
T d1ywna1         136 --LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY  185 (299)
T ss_dssp             --HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CC
T ss_pred             --HHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhcc
Confidence              22366788999999999999999999999999999999999999987553

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.2e-23  Score=196.91  Aligned_cols=146  Identities=19%  Similarity=0.219  Sum_probs=95.1

Q ss_pred             CCccccccccceeEEEEecC-C----CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGSTLD-G----SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~-G----~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|+||.||+|++++ +    ..||||+.++...+...                                     
T Consensus        11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~-------------------------------------   53 (283)
T d1mqba_          11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR-------------------------------------   53 (283)
T ss_dssp             EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHH-------------------------------------
T ss_pred             eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHH-------------------------------------
Confidence            34679999999999999753 2    47999998765443211                                     


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRL  313 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (433)
                      .+|.+|+..+.+    +. +++  |.+.+..  .....+++|||++++.+.+.+....+.       ++      .... 
T Consensus        54 ~~~~~E~~il~~----l~-H~n--Iv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~-------~~------~~~~-  112 (283)
T d1mqba_          54 VDFLGEAGIMGQ----FS-HHN--IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-------FS------VLQL-  112 (283)
T ss_dssp             HHHHHHHHHHHT----CC-CTT--BCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTC-------SC------HHHH-
T ss_pred             HHHHHHHHHHHh----cC-CCC--EeeeeEEEecCCceEEEEEecccCcchhhhhccccc-------cc------HHHH-
Confidence            012334433322    22 222  2233322  235679999999999998877543211       11      1111 


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          314 LDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       314 ~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                       ..+..+++.++.|||+.|++|||+||+|||++.++.+||+|||+++.+...
T Consensus       113 -~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_         113 -VGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             -HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             -HHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCC
Confidence             235677889999999999999999999999999999999999999887654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.9e-23  Score=198.60  Aligned_cols=141  Identities=18%  Similarity=0.191  Sum_probs=98.2

Q ss_pred             cccccccceeEEEEec---CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          164 PVAAASFGQVYRGSTL---DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       164 pigsgS~gqVy~a~l~---~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .||+|+||+||+|+.+   ++..||||+.++.....   +...                                  |.+
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~---~~~~----------------------------------~~~   58 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---DTEE----------------------------------MMR   58 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---HHHH----------------------------------HHH
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHH---HHHH----------------------------------HHH
Confidence            5999999999999863   45689999988664332   1111                                  223


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      |++-+.++    . +++  |.+++..+ +...+|||||++|++|.+++...+.       .+++..        ...+..
T Consensus        59 E~~il~~l----~-Hpn--Iv~l~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~-------~l~~~~--------~~~i~~  116 (285)
T d1u59a_          59 EAQIMHQL----D-NPY--IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKRE-------EIPVSN--------VAELLH  116 (285)
T ss_dssp             HHHHHHHC----C-CTT--BCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTT-------TSCHHH--------HHHHHH
T ss_pred             HHHHHHhC----C-CCC--EeeEeeeeccCeEEEEEEeCCCCcHHHHhhcccc-------CCCHHH--------HHHHHH
Confidence            44333332    2 222  23333322 3567999999999999998754321       011111        123567


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +++.||.|||+.|++|||+||.||+++.++.+||+|||+++.+.
T Consensus       117 qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_         117 QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  160 (285)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             HHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccc
Confidence            88999999999999999999999999999999999999998664

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=6.4e-23  Score=193.46  Aligned_cols=143  Identities=17%  Similarity=0.130  Sum_probs=97.5

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      +.||+|+||.||+|+. .+|+.||||+.......  ..+...                                  +.+|
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~--~~~~~~----------------------------------~~~E   58 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQR----------------------------------FKEE   58 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHH----------------------------------HHHH
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHHH----------------------------------HHHH
Confidence            4699999999999996 57999999987542111  111111                                  1223


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeeccc------CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYL------SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      .+.+.    .+.   +-+|.+++..+      ....+||||||+|++|.+++......+        +.        ...
T Consensus        59 ~~il~----~l~---HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~--------~~--------~~~  115 (270)
T d1t4ha_          59 AEMLK----GLQ---HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK--------IK--------VLR  115 (270)
T ss_dssp             HHHHT----TCC---CTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCC--------HH--------HHH
T ss_pred             HHHHH----hCC---CCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhcccccc--------HH--------HHH
Confidence            32221    122   22334444322      123589999999999999987554332        11        112


Q ss_pred             HHHHHHHHHHHHHHHCC--ccccCCCCCceEEc-cCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETG--ILHADPHPGNLRYT-SSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~g--ivH~DlhpgNilv~-~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..+++.+|.|||+.|  ++|||+||+|||++ ++|.++|+|||+++....
T Consensus       116 ~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_         116 SWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             HHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             HHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            35678899999999998  99999999999996 579999999999976543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.5e-24  Score=204.26  Aligned_cols=146  Identities=20%  Similarity=0.198  Sum_probs=94.4

Q ss_pred             ccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          163 EPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      +.||+|+||+||+|+. .+|+.||||+.+.........+                           +...      +.+|
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~---------------------------~~~~------~~~E   50 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDG---------------------------INRT------ALRE   50 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC---------------------------------------CTH------HHHH
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHH---------------------------HHHH------HHHH
Confidence            4699999999999995 5899999999864322110000                           0000      1223


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNK  319 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  319 (433)
                      ...+.+    +.+ ++  |.+.+..  ..+..+|||||++|+.+..+......++        +..        ...+..
T Consensus        51 i~il~~----l~h-pn--Iv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~--------~~~--------~~~~~~  107 (299)
T d1ua2a_          51 IKLLQE----LSH-PN--IIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT--------PSH--------IKAYML  107 (299)
T ss_dssp             HHHHHH----CCC-TT--BCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCC--------SSH--------HHHHHH
T ss_pred             HHHHHh----CCC-CC--EeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCC--------HHH--------HHHHHH
Confidence            222222    222 22  2333322  2356699999999987776654333332        111        123567


Q ss_pred             HHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          320 GVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       320 ~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ++..+|.|||+.|++|||+||+||+++.+|.++|+|||++..+..
T Consensus       108 qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~  152 (299)
T d1ua2a_         108 MTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS  152 (299)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred             HHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCC
Confidence            788999999999999999999999999999999999999977643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.4e-23  Score=203.44  Aligned_cols=187  Identities=16%  Similarity=0.084  Sum_probs=110.6

Q ss_pred             CccccccccceeEEEEec-CC-----CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL-DG-----SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G-----~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|+||+||+|+.+ ++     ..||||+........   +..                                 
T Consensus        42 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~---~~~---------------------------------   85 (325)
T d1rjba_          42 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS---ERE---------------------------------   85 (325)
T ss_dssp             EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CH---------------------------------
T ss_pred             eeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHH---HHH---------------------------------
Confidence            468999999999999963 22     379999886543221   000                                 


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCch---------hhh
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTH---------LDR  304 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~---------~~~  304 (433)
                       .+.+|...+.++    .++++  |.+++..  .....+||||||+|++|.+++........+....+         ...
T Consensus        86 -~~~~E~~~l~~l----~~Hpn--Iv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (325)
T d1rjba_          86 -ALMSELKMMTQL----GSHEN--IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL  158 (325)
T ss_dssp             -HHHHHHHHHHHH----CCCTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC-------------------
T ss_pred             -HHHHHHHHHHHh----cCCCc--EeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhcccccccccccc
Confidence             112233333222    12222  2333332  23566999999999999999976432110000000         000


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH---------------HH
Q 013944          305 QKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------------FA  369 (433)
Q Consensus       305 ~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------------~~  369 (433)
                      ..+...  ....+..+++.++.|||+.||+|||+||+||+++.+|.++|+|||+++.......               +.
T Consensus       159 ~~l~~~--~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE  236 (325)
T d1rjba_         159 NVLTFE--DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPE  236 (325)
T ss_dssp             --CCHH--HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHH
T ss_pred             CCCCHH--HHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChH
Confidence            011111  1223667889999999999999999999999999999999999999876543211               11


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHhcC
Q 013944          370 MLASIVHIVNGDWQSLVHSLTEMD  393 (433)
Q Consensus       370 ~~~~~~~~~~~d~~~~~~~l~~~g  393 (433)
                      .+..-......|+|+++-.+++|-
T Consensus       237 ~l~~~~~~~~~DiwS~Gvil~eml  260 (325)
T d1rjba_         237 SLFEGIYTIKSDVWSYGILLWEIF  260 (325)
T ss_dssp             HHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred             HHcCCCCCcceeccchhHHHHHHH
Confidence            111111123457777777777753

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.86  E-value=2.5e-23  Score=197.66  Aligned_cols=188  Identities=16%  Similarity=0.137  Sum_probs=116.7

Q ss_pred             CCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          161 SEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      ..+.||+|+||.||+|+.++|+.||||+.+......-  ..                                  -.+.+
T Consensus         6 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~--~~----------------------------------~~~~~   49 (286)
T d1ob3a_           6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEG--IP----------------------------------STTIR   49 (286)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGC--CC----------------------------------HHHHH
T ss_pred             eccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChH--HH----------------------------------HHHHH
Confidence            3568999999999999988999999999764322100  00                                  00112


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.+    +. ++  ++.+++..  ..+..+++||++.|+.+..+......++        +.        ....+.
T Consensus        50 E~~il~~----l~-hp--nIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~--------~~--------~~~~i~  106 (286)
T d1ob3a_          50 EISILKE----LK-HS--NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE--------SV--------TAKSFL  106 (286)
T ss_dssp             HHHGGGG----CC-CT--TBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCC--------HH--------HHHHHH
T ss_pred             HHHHHHh----CC-CC--cEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcc--------hh--------hhHHHH
Confidence            2222222    11 22  23334433  3467799999999887776655433322        11        123467


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCCC
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRPG  398 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~~  398 (433)
                      .++..+|++||+.||+|||+||+|||++.+|.++++|||.+............     ......+...+.+.......+.
T Consensus       107 ~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~-----~~~~~~y~~pE~~~~~~~~~~~  181 (286)
T d1ob3a_         107 LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-----EIVTLWYRAPDVLMGSKKYSTT  181 (286)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------------CCCTTCCHHHHTTCCSCCTH
T ss_pred             HHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccce-----ecccchhhhHHHHhCCCCCCcc
Confidence            78889999999999999999999999999999999999999877543221110     0111122333333344444556


Q ss_pred             CChHHHHHHHHHHh
Q 013944          399 TNTLRVTMDLEDAL  412 (433)
Q Consensus       399 ~d~~~~~~~l~~~l  412 (433)
                      +|+|+++.-+.+++
T Consensus       182 ~DiwslGv~l~el~  195 (286)
T d1ob3a_         182 IDIWSVGCIFAEMV  195 (286)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             eeehhcCcHHHHHH
Confidence            66666666655554

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.86  E-value=7.8e-22  Score=176.14  Aligned_cols=154  Identities=14%  Similarity=0.096  Sum_probs=98.2

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTLE  241 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E  241 (433)
                      .++||+|+||+||+|+..+|++||||+++++.....  +....+..         ......   .      ........|
T Consensus         5 g~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~--~~~~~~~~---------~~~~~~---~------~~~~~~~~e   64 (191)
T d1zara2           5 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFK--KVKEKRDY---------GDLHFS---V------LAIRSARNE   64 (191)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECC--------CCCC----------------CHH---H------HHHHHHHHH
T ss_pred             CCEeeeCcceEEEEEECCCCCEEEEEEEecccchhh--hhhhhhhh---------ccHHHH---H------HHHHHHHHH
Confidence            468999999999999988999999999987643210  00000000         000000   0      011123456


Q ss_pred             HHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 013944          242 AANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVNKGV  321 (433)
Q Consensus       242 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~i  321 (433)
                      ++++.++.       ++.+|..+..  ...+|+|||++|..+.++..               ...        ..+..++
T Consensus        65 ~~~l~~l~-------~~~v~~~~~~--~~~~lvme~~~~~~~~~l~~---------------~~~--------~~i~~ql  112 (191)
T d1zara2          65 FRALQKLQ-------GLAVPKVYAW--EGNAVLMELIDAKELYRVRV---------------ENP--------DEVLDMI  112 (191)
T ss_dssp             HHHHHHTT-------TSSSCCEEEE--ETTEEEEECCCCEEGGGCCC---------------SCH--------HHHHHHH
T ss_pred             HHHHHHcc-------CCCcceEEEe--cCCEEEEEeeccccccchhh---------------HHH--------HHHHHHH
Confidence            66776653       3456666642  34589999999876554311               000        1245667


Q ss_pred             HHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHH
Q 013944          322 EATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQF  368 (433)
Q Consensus       322 ~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~  368 (433)
                      ..++.+||++|++|+|+||+|||+++ +.++++|||++.........
T Consensus       113 ~~~l~~lH~~giiHrDiKP~NILv~~-~~~~liDFG~a~~~~~~~~~  158 (191)
T d1zara2         113 LEEVAKFYHRGIVHGDLSQYNVLVSE-EGIWIIDFPQSVEVGEEGWR  158 (191)
T ss_dssp             HHHHHHHHHTTEECSCCSTTSEEEET-TEEEECCCTTCEETTSTTHH
T ss_pred             HHHHHHHhhCCEEEccCChhheeeeC-CCEEEEECCCcccCCCCCcH
Confidence            78999999999999999999999985 55999999999888754433

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.3e-22  Score=195.52  Aligned_cols=207  Identities=16%  Similarity=0.152  Sum_probs=131.9

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+. .+|+.||||+++..  ..+.+|+.++                                    
T Consensus        17 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--~~~~~E~~~~------------------------------------   58 (335)
T d2ozaa1          17 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREVELH------------------------------------   58 (335)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEECS--HHHHHHHHHH------------------------------------
T ss_pred             eEEeeeccCeEEEEEEECCCCCEEEEEEECCc--HHHHHHHHHH------------------------------------
Confidence            45799999999999995 68999999998632  2222222221                                    


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc------CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL------SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                           .+.    .+++  +|.+++..+      ....+||||||+|++|.+++......      .+++.+        .
T Consensus        59 -----~~~----~~hp--nIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~------~l~e~~--------~  113 (335)
T d2ozaa1          59 -----WRA----SQCP--HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ------AFTERE--------A  113 (335)
T ss_dssp             -----HHH----TTST--TBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCC------CEEHHH--------H
T ss_pred             -----HHh----cCCC--CCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCC------CcCHHH--------H
Confidence                 111    1122  233443322      23469999999999999998753211      122222        2


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEcc---CCcEEEEecccccccCHHHHH------------HHHHHHHHHHh
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQIGFLDFGLLCRMERKHQF------------AMLASIVHIVN  379 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~---~g~l~l~DFGl~~~l~~~~~~------------~~~~~~~~~~~  379 (433)
                      ..+..++..++.|||+.|++|||+||+||+++.   ++.++|+|||+++........            .++........
T Consensus       114 ~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~  193 (335)
T d2ozaa1         114 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS  193 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHH
T ss_pred             HHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHH
Confidence            346677889999999999999999999999975   467999999999865432110            00000011234


Q ss_pred             cCHHHHHHHHHhcCCCCCCCC--------------------------hHHHHHHHHHHhhchhccCCCCCcccccccc
Q 013944          380 GDWQSLVHSLTEMDVVRPGTN--------------------------TLRVTMDLEDALGEVEFKDGIPDVKFSRVRS  431 (433)
Q Consensus       380 ~d~~~~~~~l~~~g~~~~~~d--------------------------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~  431 (433)
                      .|.|+++..+++|-+..+...                          ...+..++.+++...+..+|-.++++.++|.
T Consensus       194 ~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         194 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            589999999998765432210                          0122345666666666556777777776653

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.84  E-value=1.3e-22  Score=196.52  Aligned_cols=139  Identities=19%  Similarity=0.263  Sum_probs=100.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||+||+|+. .+|+.||||+.++.-.+.+.+++.+|+                                 
T Consensus        38 ~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~---------------------------------   84 (328)
T d3bqca1          38 QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILE---------------------------------   84 (328)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHH---------------------------------
T ss_pred             EEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHH---------------------------------
Confidence            3456899999999999996 689999999988765555444444433                                 


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                              .+    .++++  |++.+..    .....++|||||+|++|.++..   .+        ++.+        +
T Consensus        85 --------~l----~~hpn--Iv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~---~l--------~e~~--------i  131 (328)
T d3bqca1          85 --------NL----RGGPN--IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TL--------TDYD--------I  131 (328)
T ss_dssp             --------HH----TTSTT--BCCEEEEEECTTTCSEEEEEECCCSCBGGGTTT---SC--------CHHH--------H
T ss_pred             --------hc----cCCCC--CcEEEEEEEecCCCceeEEEeecCCCcHHHHhc---CC--------CHHH--------H
Confidence                    11    11222  2333322    2345799999999999877642   11        1211        2


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC-cEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g-~l~l~DFGl~~~l~~  364 (433)
                      ..+..++..+|.+||+.||+|||+||+|||++.++ .++++|||++..+.+
T Consensus       132 ~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~  182 (328)
T d3bqca1         132 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  182 (328)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred             HHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccC
Confidence            34677889999999999999999999999998765 699999999987654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.83  E-value=1.3e-21  Score=187.30  Aligned_cols=158  Identities=20%  Similarity=0.219  Sum_probs=102.0

Q ss_pred             CccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|+||.||+|+.+      +++.||||+.+.........                                    
T Consensus        18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~------------------------------------   61 (301)
T d1lufa_          18 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA------------------------------------   61 (301)
T ss_dssp             EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHH------------------------------------
T ss_pred             eEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHH------------------------------------
Confidence            457999999999999863      46789999987654332111                                    


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCc----------hhh
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSST----------HLD  303 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~----------~~~  303 (433)
                       +|.+|...+.+    +. +++  +.+.+.  ......+++|||+++++|.+++.............          ...
T Consensus        62 -~~~~E~~il~~----l~-h~n--iv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (301)
T d1lufa_          62 -DFQREAALMAE----FD-NPN--IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG  133 (301)
T ss_dssp             -HHHHHHHHHHT----CC-CTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC---------------------
T ss_pred             -HHHHHHHHHHh----cC-CCC--cccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccC
Confidence             12233333322    22 222  222222  23467799999999999999987543211100000          000


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          304 RQKLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       304 ~~~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      ...+....  ...+..+++.++.|+|+.|++|||+||.|||++.++.+||+|||+++.+.+.
T Consensus       134 ~~~l~~~~--~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~  193 (301)
T d1lufa_         134 PPPLSCAE--QLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA  193 (301)
T ss_dssp             -CCCCHHH--HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG
T ss_pred             CCCCCHHH--HHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCC
Confidence            01111222  2246778899999999999999999999999999999999999999866543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.8e-23  Score=197.79  Aligned_cols=143  Identities=22%  Similarity=0.245  Sum_probs=93.4

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||+||+|+. .+|+.||||+.+.......  ...                                  .+.+
T Consensus         7 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--~~~----------------------------------~~~~   50 (298)
T d1gz8a_           7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG--VPS----------------------------------TAIR   50 (298)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEC---------CCH----------------------------------HHHH
T ss_pred             ccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChH--HHH----------------------------------HHHH
Confidence            46799999999999995 6899999999864321100  000                                  0111


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhc-cCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLS-TGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      |.+.+.    .+   .+-.|.+++..+  .+..++||||+.|+.+....... .+++        +.        ....+
T Consensus        51 Ei~il~----~l---~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~--------e~--------~~~~~  107 (298)
T d1gz8a_          51 EISLLK----EL---NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIP--------LP--------LIKSY  107 (298)
T ss_dssp             HHHHHT----TC---CCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCC--------HH--------HHHHH
T ss_pred             HHHHHH----hC---CCCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCC--------HH--------HHHHH
Confidence            222221    12   222334444332  35679999999875444332221 1121        11        12346


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..++..+|.|||+.||+|||+||+|||++.++.++++|||+++...
T Consensus       108 ~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~  153 (298)
T d1gz8a_         108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  153 (298)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred             HHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceecc
Confidence            6788899999999999999999999999999999999999987654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.1e-21  Score=181.97  Aligned_cols=145  Identities=21%  Similarity=0.220  Sum_probs=92.0

Q ss_pred             CccccccccceeEEEEec----CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGSTL----DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~----~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|+||+||+|+..    .+..||||+.+....+....                                     .
T Consensus        12 ~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~-------------------------------------~   54 (273)
T d1mp8a_          12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-------------------------------------K   54 (273)
T ss_dssp             EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHH-------------------------------------H
T ss_pred             EEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHH-------------------------------------H
Confidence            468999999999999863    24579999887543322110                                     1


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      |.+|...+.+    +. ++  +|.+++..+ .+..++||||++|+++.+++....+.       .++..        ...
T Consensus        55 ~~~E~~~l~~----l~-Hp--nIv~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~~-------l~~~~--------~~~  112 (273)
T d1mp8a_          55 FLQEALTMRQ----FD-HP--HIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYS-------LDLAS--------LIL  112 (273)
T ss_dssp             HHHHHHHHHT----CC-CT--TBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTT-------SCHHH--------HHH
T ss_pred             HHHHHHHHHh----CC-CC--CEeeEEEEEecCeEEEEEEeccCCcHHhhhhccCCC-------CCHHH--------HHH
Confidence            1234333322    22 22  233444333 35679999999999999886543211       11111        123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                      +..+++.++.|+|+.|++|||+||.||+++.++.+||+|||+++.++..
T Consensus       113 ~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~  161 (273)
T d1mp8a_         113 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  161 (273)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             HHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCC
Confidence            5677889999999999999999999999999999999999999877643

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.5e-23  Score=192.61  Aligned_cols=146  Identities=21%  Similarity=0.218  Sum_probs=90.0

Q ss_pred             CccccccccceeEEEEec--CC--CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          162 EEPVAAASFGQVYRGSTL--DG--SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~--~G--~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .+.||+|+||+||+|++.  ++  ..||||+..+.....-. ..+                                  +
T Consensus        13 ~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~-~~~----------------------------------~   57 (273)
T d1u46a_          13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMD----------------------------------D   57 (273)
T ss_dssp             EEECC----CCCEEEEEECTTSCEEEEEEEC--------CH-HHH----------------------------------H
T ss_pred             EEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHH-HHH----------------------------------H
Confidence            357999999999999853  33  47899988654321100 000                                  1


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeeccc-CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYL-SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                      |.+|...+.+    +. ++  +|.++|..+ ....++||||++++++.+.+....+             .+....  ...
T Consensus        58 ~~~Ei~~l~~----l~-H~--nIv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~-------------~l~~~~--~~~  115 (273)
T d1u46a_          58 FIREVNAMHS----LD-HR--NLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG-------------HFLLGT--LSR  115 (273)
T ss_dssp             HHHHHHHHHH----CC-CT--TBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGG-------------GSCHHH--HHH
T ss_pred             HHHHHHHHHh----CC-CC--CEEEEEEEEeecchheeeeeecCcchhhhhhcccC-------------CCCHHH--HHH
Confidence            2334333322    22 22  223344322 2456999999999999987764321             011111  123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      +..+++.||.|||+.|++|||+||.||+++.++.++++|||+++.+..
T Consensus       116 ~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_         116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             HHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            567788999999999999999999999999999999999999987643

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=6e-21  Score=179.03  Aligned_cols=179  Identities=15%  Similarity=0.145  Sum_probs=108.6

Q ss_pred             CccccccccceeEEEEecCCCEEEEEEcCCCc-hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGSTLDGSIVAVKVQRPNL-RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~-~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|++ .|++||||+.+... .+.+.                                         +
T Consensus        12 ~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~~~~~~~-----------------------------------------~   49 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFL-----------------------------------------A   49 (262)
T ss_dssp             EEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--HHHH-----------------------------------------H
T ss_pred             eEEEecCCCeEEEEEEE-CCeEEEEEEECcHHHHHHHH-----------------------------------------H
Confidence            46799999999999998 58899999987532 11111                                         2


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeeccc---CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRYL---SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                      |...+.    .++ ++  +|.+++...   ....+|||||++|++|.+++.....            ..+...  ....+
T Consensus        50 E~~~l~----~l~-Hp--nIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~------------~~l~~~--~~~~i  108 (262)
T d1byga_          50 EASVMT----QLR-HS--NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR------------SVLGGD--CLLKF  108 (262)
T ss_dssp             THHHHT----TCC-CT--TBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH------------HHCCHH--HHHHH
T ss_pred             HHHHHH----hCC-CC--CEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCC------------CCCCHH--HHHHH
Confidence            222221    122 22  233334322   2346899999999999999864311            011111  11236


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCCCCC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDVVRP  397 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~~~~  397 (433)
                      ..+++.++.|||+.+++|+|+||.||+++.+|.++++|||+++.........         .+....++.....-+...+
T Consensus       109 ~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~---------~~~~~y~aPE~l~~~~~t~  179 (262)
T d1byga_         109 SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG---------KLPVKWTAPEALREKKFST  179 (262)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------------------CCTTTSCHHHHHHCCCCH
T ss_pred             HHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCccc---------cccccCCChHHHhCCCCCh
Confidence            6788999999999999999999999999999999999999998765533211         1122222333333344455


Q ss_pred             CCChHHHHHHHHHHh
Q 013944          398 GTNTLRVTMDLEDAL  412 (433)
Q Consensus       398 ~~d~~~~~~~l~~~l  412 (433)
                      ..|+++|+..+.+++
T Consensus       180 ~sDIwSfG~il~el~  194 (262)
T d1byga_         180 KSDVWSFGILLWEIY  194 (262)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHhHHHHHHHHH
Confidence            666666666666655

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.5e-22  Score=193.70  Aligned_cols=145  Identities=19%  Similarity=0.182  Sum_probs=95.3

Q ss_pred             CCccccccccceeEEEEe-cCCC----EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          161 SEEPVAAASFGQVYRGST-LDGS----IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~----~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      ..+.||+|+||+||+|+. .+|+    +||||..++........                                    
T Consensus        13 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~------------------------------------   56 (317)
T d1xkka_          13 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK------------------------------------   56 (317)
T ss_dssp             EEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHH------------------------------------
T ss_pred             EeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHH------------------------------------
Confidence            346899999999999986 4565    68888876543221110                                    


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeecc-cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRY-LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                       .|.+|...+.++    . +++  |.+.+.. .....+++|||+.+++|.+.+......       .++..        .
T Consensus        57 -~~~~E~~~l~~l----~-Hpn--Iv~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~~-------~~~~~--------~  113 (317)
T d1xkka_          57 -EILDEAYVMASV----D-NPH--VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN-------IGSQY--------L  113 (317)
T ss_dssp             -HHHHHHHHHHHC----C-CTT--BCCEEEEEESSSEEEEEECCTTCBHHHHHHHTSSS-------CCHHH--------H
T ss_pred             -HHHHHHHHHHhC----C-CCC--EeeEEEEEecCCeeEEEEeccCCcccccccccccC-------CCHHH--------H
Confidence             012233333222    2 222  2233322 235668999999999998877653211       11111        1


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..+..+++.||.|||+.|++|||+||.||+++.++.++|+|||+++.+..
T Consensus       114 ~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  163 (317)
T d1xkka_         114 LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  163 (317)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccc
Confidence            23566788999999999999999999999999999999999999987754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.9e-21  Score=185.92  Aligned_cols=160  Identities=17%  Similarity=0.184  Sum_probs=97.4

Q ss_pred             CCccccccccceeEEEEec--------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          161 SEEPVAAASFGQVYRGSTL--------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l~--------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      ..+.||+|+||+||+|+..        ++..||||+++++.......+                                
T Consensus        17 l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~--------------------------------   64 (299)
T d1fgka_          17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSD--------------------------------   64 (299)
T ss_dssp             EEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHH--------------------------------
T ss_pred             EeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHH--------------------------------
Confidence            3568999999999999852        234799999987654321111                                


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCe-EeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCC--CCchhhhhhhHH
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFI-HVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDG--SSTHLDRQKLDA  309 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~--~~~~~~~~~~~~  309 (433)
                           +.+|...+.++    .+++++ .+-.++ ......++||||++|++|.+++..........  .........+..
T Consensus        65 -----~~~e~~~l~~~----~~HpnIv~~~~~~-~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~  134 (299)
T d1fgka_          65 -----LISEMEMMKMI----GKHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS  134 (299)
T ss_dssp             -----HHHHHHHHHHH----CCCTTBCCEEEEE-CSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCH
T ss_pred             -----HHHHHHHHHHh----cCCCeEEeccccc-ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCH
Confidence                 12233333332    122322 121222 12356799999999999999997543211000  000000111112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      ..  ...+..+++.++.|+|+.|++|||+||.|||++.+|.++|+|||+++....
T Consensus       135 ~~--~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~  187 (299)
T d1fgka_         135 KD--LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH  187 (299)
T ss_dssp             HH--HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGG
T ss_pred             HH--HHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccc
Confidence            11  234677889999999999999999999999999999999999999887644

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.7e-22  Score=190.90  Aligned_cols=218  Identities=17%  Similarity=0.127  Sum_probs=127.0

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      .-.+.||+|+||.||+|+. .+|+.||||+.+........                                .......+
T Consensus         7 ~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~--------------------------------~~~~~~~~   54 (273)
T d1xwsa_           7 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--------------------------------ELPNGTRV   54 (273)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEE--------------------------------ECTTCCEE
T ss_pred             EEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchh--------------------------------hhhHHHHH
Confidence            3457899999999999995 58999999987542110000                                00000011


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCC-CCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVG-ESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      ..|...+.++.   ..++  .+.+++..+  ....++||||++| +.+.+++......+        +.        ...
T Consensus        55 ~~E~~il~~l~---~~h~--nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~--------e~--------~~~  113 (273)
T d1xwsa_          55 PMEVVLLKKVS---SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ--------EE--------LAR  113 (273)
T ss_dssp             EHHHHHHHHHC---SSSC--SBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCC--------HH--------HHH
T ss_pred             HHHHHHHHHhc---cCCC--CccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCC--------HH--------HHH
Confidence            22333332221   1122  234444432  3566999999987 46666665443332        11        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccC-CcEEEEecccccccCHHHH-----------HHHHHHHH-HHHhcCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSS-GQIGFLDFGLLCRMERKHQ-----------FAMLASIV-HIVNGDW  382 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~-g~l~l~DFGl~~~l~~~~~-----------~~~~~~~~-~~~~~d~  382 (433)
                      .+..+++.++.+||+.|++|||+||+||+++.+ +.++|+|||++........           +.++..-. .....|.
T Consensus       114 ~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~Di  193 (273)
T d1xwsa_         114 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAV  193 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCccccc
Confidence            466778899999999999999999999999855 7999999999876543211           11111100 1234578


Q ss_pred             HHHHHHHHhcCCCCCCCCh------------HHHHHHHHHHhhchhccCCCCCccccccc
Q 013944          383 QSLVHSLTEMDVVRPGTNT------------LRVTMDLEDALGEVEFKDGIPDVKFSRVR  430 (433)
Q Consensus       383 ~~~~~~l~~~g~~~~~~d~------------~~~~~~l~~~l~~~~~~~~~~~~~~~~~l  430 (433)
                      |+++..+++|-......+.            ..+..++.+++...+.-+|-.+.++.++|
T Consensus       194 wSlGvilyell~g~~Pf~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil  253 (273)
T d1xwsa_         194 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ  253 (273)
T ss_dssp             HHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ccceeeehhHhhCCCCCCCchHHhhcccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHh
Confidence            8888888776433322111            11223444555554444555555655554

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=9.1e-22  Score=191.93  Aligned_cols=184  Identities=18%  Similarity=0.192  Sum_probs=106.5

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+.......  +....                                  .+
T Consensus        23 i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~--~~~~~----------------------------------~~   66 (346)
T d1cm8a_          23 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL--FAKRA----------------------------------YR   66 (346)
T ss_dssp             EEEC------CEEEEEETTTCCEEEEEECSSTTSSHH--HHHHH----------------------------------HH
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChH--HHHHH----------------------------------HH
Confidence            45899999999999995 5899999999875432211  11111                                  11


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeecc-----cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFRY-----LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~~-----~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      |...+.+    +.+.+-+.+-.++..     .....+|||||+ |..+.++... ..++        +.        ...
T Consensus        67 Ei~il~~----l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~--------~~--------~~~  124 (346)
T d1cm8a_          67 ELRLLKH----MRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLG--------ED--------RIQ  124 (346)
T ss_dssp             HHHHHHH----CCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCC--------HH--------HHH
T ss_pred             HHHHHHh----cCCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHHHHh-cccc--------HH--------HHH
Confidence            2222211    222221222222211     123459999999 5666666542 2222        11        123


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcC-HHHHHHHHHhcCC
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGD-WQSLVHSLTEMDV  394 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d-~~~~~~~l~~~g~  394 (433)
                      .+..+++.+|.|||+.|++|||+||+|||++.++.++++|||++...+.....         ..+. .+...+.+.....
T Consensus       125 ~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~---------~~~t~~y~aPE~~~~~~~  195 (346)
T d1cm8a_         125 FLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTG---------YVVTRWYRAPEVILNWMR  195 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCS---------SCSCGGGCCTHHHHTTTC
T ss_pred             HHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCcccc---------ccccccccCHHHHcCCCC
Confidence            46778899999999999999999999999999999999999999887653211         0011 1122233333444


Q ss_pred             CCCCCChHHHHHHHHHHh
Q 013944          395 VRPGTNTLRVTMDLEDAL  412 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l  412 (433)
                      ....+|+|+++-.+.+++
T Consensus       196 ~~~~~DiwSlGvil~ell  213 (346)
T d1cm8a_         196 YTQTVDIWSVGCIMAEMI  213 (346)
T ss_dssp             CCTTHHHHHHHHHHHHHH
T ss_pred             CCccchhhcchHHHHHHH
Confidence            556677777666665554

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=6.6e-21  Score=186.16  Aligned_cols=148  Identities=21%  Similarity=0.249  Sum_probs=95.4

Q ss_pred             cccCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhh
Q 013944          158 SFISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGEL  236 (433)
Q Consensus       158 ~~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  236 (433)
                      +|-..+.||+|+||+||+|+. .+|+.||||+.+.+-.. ..+|+.+|+                               
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~Ei~il~-------------------------------   68 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-KNRELQIMR-------------------------------   68 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS-CCHHHHHHH-------------------------------
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH-HHHHHHHHH-------------------------------
Confidence            455567899999999999996 58999999988653211 112332222                               


Q ss_pred             chHHHHHHHHHHHHhcCCCCCeEeceeeccc-----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          237 DYTLEAANASEFQESHSPFPFIHVPKVFRYL-----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       237 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                                +    +.+.+-+.+-.++...     ....+||||||+|+.+..+.......     ..+++.       
T Consensus        69 ----------~----l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~-----~~l~~~-------  122 (350)
T d1q5ka_          69 ----------K----LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-----QTLPVI-------  122 (350)
T ss_dssp             ----------H----CCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTT-----CCCCHH-------
T ss_pred             ----------h----cCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhcc-----CCCCHH-------
Confidence                      1    2222222222222111     12248999999876544433221110     001111       


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCC-cEEEEecccccccCH
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSG-QIGFLDFGLLCRMER  364 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g-~l~l~DFGl~~~l~~  364 (433)
                       ....+..++..||.|||+.||+|||+||+|||++.++ .++|+|||++..+..
T Consensus       123 -~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~  175 (350)
T d1q5ka_         123 -YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR  175 (350)
T ss_dssp             -HHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred             -HHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence             1234677889999999999999999999999999875 899999999987654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.3e-20  Score=181.08  Aligned_cols=186  Identities=18%  Similarity=0.129  Sum_probs=115.5

Q ss_pred             CccccccccceeEEEEe------cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGST------LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l------~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|+||.||+|++      .+++.||||++++.......                                     
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~-------------------------------------   70 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-------------------------------------   70 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHH-------------------------------------
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHH-------------------------------------
Confidence            46899999999999985      25679999999865432111                                     


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeeccc--CCceEEEeeccCCCCcchhhhhccCCCCCCCC----chhhhhhhHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYL--SRKRVLTMEWMVGESPTDLISLSTGSSVDGSS----THLDRQKLDA  309 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~----~~~~~~~~~~  309 (433)
                      ..|.+|...+.++    .+++++  -+++..+  ....+|+||||+|++|.+++............    .......+..
T Consensus        71 ~~~~~E~~~~~~l----~~HpnI--v~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~  144 (311)
T d1t46a_          71 EALMSELKVLSYL----GNHMNI--VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL  144 (311)
T ss_dssp             HHHHHHHHHHHHH----CCCTTB--CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCH
T ss_pred             HHHHHHHHHHHhc----cCCCCE--EEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCH
Confidence            1122343333332    233332  2333332  24569999999999999998754321100000    0000001111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH---------------HHHHHHH
Q 013944          310 KWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ---------------FAMLASI  374 (433)
Q Consensus       310 ~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~---------------~~~~~~~  374 (433)
                      .  ....+..+++.++.+||+.|++|||+||.||+++.++.++++|||+++.+.....               ......-
T Consensus       145 ~--~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  222 (311)
T d1t46a_         145 E--DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC  222 (311)
T ss_dssp             H--HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHC
T ss_pred             H--HHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCC
Confidence            1  1123667889999999999999999999999999999999999999986643221               1111111


Q ss_pred             HHHHhcCHHHHHHHHHhc
Q 013944          375 VHIVNGDWQSLVHSLTEM  392 (433)
Q Consensus       375 ~~~~~~d~~~~~~~l~~~  392 (433)
                      ......|.|+++..+++|
T Consensus       223 ~~~~~~DIwS~G~~l~el  240 (311)
T d1t46a_         223 VYTFESDVWSYGIFLWEL  240 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcccccchHHHHHHH
Confidence            123445777777777765

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.2e-20  Score=179.47  Aligned_cols=143  Identities=21%  Similarity=0.191  Sum_probs=95.8

Q ss_pred             ccccccccceeEEEEecC--C--CEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          163 EPVAAASFGQVYRGSTLD--G--SIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       163 ~pigsgS~gqVy~a~l~~--G--~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      +.||+|+||.||+|++.+  |  ..||||+.+......   +..-                                  |
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~---~~~~----------------------------------~   75 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EVSQ----------------------------------F   75 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHH---HHHH----------------------------------H
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHH---HHHH----------------------------------H
Confidence            579999999999999743  2  368999886432221   1111                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeec---ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFR---YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~---~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      .+|...+.+    +.+ ++  +.+++.   ......++|||||+|++|.+++.......       .      ....  .
T Consensus        76 ~~E~~~l~~----l~H-pn--Iv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~-------~------~~~~--~  133 (311)
T d1r0pa_          76 LTEGIIMKD----FSH-PN--VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-------T------VKDL--I  133 (311)
T ss_dssp             HHHHHHHHT----CCC-TT--BCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCC-------B------HHHH--H
T ss_pred             HHHHHHHHh----CCC-CC--EeEEeEEEEecCCceEEEEEEeecCchhhhhccccccc-------h------HHHH--H
Confidence            223333322    222 22  222222   22345689999999999999876432211       1      1111  1


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..+++.++.++|..|++|||+||.|||++.++.++|+|||+++.+..
T Consensus       134 ~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~  182 (311)
T d1r0pa_         134 GFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  182 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTT
T ss_pred             HHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccc
Confidence            3566788999999999999999999999999999999999999987643

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8.2e-22  Score=187.25  Aligned_cols=144  Identities=17%  Similarity=0.148  Sum_probs=98.2

Q ss_pred             CccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchHH
Q 013944          162 EEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYTL  240 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~  240 (433)
                      .+.||+|+||.||+|+. .+|+.||||+.+......  .....                                  +.+
T Consensus         7 i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~----------------------------------~~~   50 (292)
T d1unla_           7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE--GVPSS----------------------------------ALR   50 (292)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST--THHHH----------------------------------HHH
T ss_pred             eeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCCh--HHHHH----------------------------------HHH
Confidence            46899999999999995 689999999975432110  00000                                  011


Q ss_pred             HHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 013944          241 EAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLVN  318 (433)
Q Consensus       241 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~  318 (433)
                      |...+.    .+. +++  +.+.+.  ......++|||++.|+.+..+....+..+        +.        ....+.
T Consensus        51 E~~il~----~l~-h~n--iv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~--------~~--------~~~~~~  107 (292)
T d1unla_          51 EICLLK----ELK-HKN--IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD--------PE--------IVKSFL  107 (292)
T ss_dssp             HHHHHT----TCC-CTT--BCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCC--------HH--------HHHHHH
T ss_pred             HHHHHH----hcC-cCC--EEeeccccccccceeEEeeeccccccccccccccccc--------hh--------HHHHHH
Confidence            222211    122 222  233332  23456699999999999888776443322        11        112356


Q ss_pred             HHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          319 KGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       319 ~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .++..+|.+||+.|++|||+||+||+++.++.++++|||.+.....
T Consensus       108 ~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~  153 (292)
T d1unla_         108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccC
Confidence            6788899999999999999999999999999999999999987643

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.5e-20  Score=179.93  Aligned_cols=141  Identities=18%  Similarity=0.241  Sum_probs=101.1

Q ss_pred             CCccccccccceeEEEEe----cCCCEEEEEEcCCCc-------hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 013944          161 SEEPVAAASFGQVYRGST----LDGSIVAVKVQRPNL-------RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELG  229 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l----~~G~~VAVKv~~p~~-------~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~  229 (433)
                      -.+.||+|+||.||+|+.    .+|+.||||+.+...       .+.+.                               
T Consensus        28 ~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~-------------------------------   76 (322)
T d1vzoa_          28 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR-------------------------------   76 (322)
T ss_dssp             EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCC-------------------------------
T ss_pred             EEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHH-------------------------------
Confidence            356899999999999984    258999999876421       12222                               


Q ss_pred             HHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhh
Q 013944          230 KGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKL  307 (433)
Q Consensus       230 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~  307 (433)
                                +|...+.++.    +.++  |.+.+..  .....+++|||++|++|.+++......+        +..  
T Consensus        77 ----------~E~~il~~l~----h~pn--Iv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~--------e~~--  130 (322)
T d1vzoa_          77 ----------TERQVLEHIR----QSPF--LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT--------EHE--  130 (322)
T ss_dssp             ----------CHHHHHHHHH----TCTT--BCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCC--------HHH--
T ss_pred             ----------HHHHHHHhcc----CCCe--EEEeeeeeccCCceeeeeecccccHHHHHHHhccccc--------HHH--
Confidence                      2333333432    2222  2333332  2356799999999999999987654332        111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          308 DAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       308 ~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                            ...+..+++.++.++|+.|++|||+||.||+++.+|.++|+|||+++.+..
T Consensus       131 ------~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         131 ------VQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  181 (322)
T ss_dssp             ------HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             ------HHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcc
Confidence                  123556788999999999999999999999999999999999999987754

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=6e-20  Score=178.80  Aligned_cols=193  Identities=17%  Similarity=0.204  Sum_probs=116.1

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||.||+|+. .+|+.||||+.+........  ...+                                  
T Consensus        21 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~--~~~~----------------------------------   64 (348)
T d2gfsa1          21 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--AKRT----------------------------------   64 (348)
T ss_dssp             EEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHH--HHHH----------------------------------
T ss_pred             EEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHH--HHHH----------------------------------
Confidence            3457899999999999995 68999999998754332111  0001                                  


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      .+|...+.+    +.+.+.+.+-.++...    ....+++||++.|++|.+++... +++        +.        .+
T Consensus        65 ~~Ei~il~~----l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~-~l~--------e~--------~~  123 (348)
T d2gfsa1          65 YRELRLLKH----MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-KLT--------DD--------HV  123 (348)
T ss_dssp             HHHHHHHHH----CCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTC-CCC--------HH--------HH
T ss_pred             HHHHHHHHh----cCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccc-ccc--------HH--------HH
Confidence            123322222    2332323333333211    12346778888999999988532 221        11        22


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      ..+..++..+|.+||+.|++|||+||+||+++.+|.++++|||++..............        .+...+.+.....
T Consensus       124 ~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~--------~y~apE~~~~~~~  195 (348)
T d2gfsa1         124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--------WYRAPEIMLNWMH  195 (348)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHH--------HTSCHHHHTTCSC
T ss_pred             HHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcccccccccc--------cccCchhhcCCcc
Confidence            34677889999999999999999999999999999999999999987765432110000        1112222333344


Q ss_pred             CCCCCChHHHHHHHHHHh-hchhc
Q 013944          395 VRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      ....+|+|+++..+.+++ |..+|
T Consensus       196 ~~~~~DiwSlGv~l~~ll~g~~pF  219 (348)
T d2gfsa1         196 YNQTVDIWSVGCIMAELLTGRTLF  219 (348)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred             CCcccchhhhhHHHHHHHhCCCCC
Confidence            456677777776666555 44443

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.2e-20  Score=179.28  Aligned_cols=151  Identities=15%  Similarity=0.148  Sum_probs=99.0

Q ss_pred             CccccccccceeEEEEec------CCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          162 EEPVAAASFGQVYRGSTL------DGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~------~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      .+.||+|+||.||+|+++      +++.||||+.+......   +..                                 
T Consensus        25 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~---~~~---------------------------------   68 (308)
T d1p4oa_          25 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---ERI---------------------------------   68 (308)
T ss_dssp             EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHH---HHH---------------------------------
T ss_pred             eeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChH---HHH---------------------------------
Confidence            467999999999999863      36889999987543221   110                                 


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeec--ccCCceEEEeeccCCCCcchhhhhccCCC--CCCCCchhhhhhhHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFR--YLSRKRVLTMEWMVGESPTDLISLSTGSS--VDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LVmE~i~G~~L~~~l~~~~~~~--~~~~~~~~~~~~~~~~~  311 (433)
                       .|.+|...+.+    +. +++  +.+.+.  ......++||||+++++|.+++.......  ......      .....
T Consensus        69 -~~~~E~~il~~----l~-h~n--Iv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~------~~~~~  134 (308)
T d1p4oa_          69 -EFLNEASVMKE----FN-CHH--VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP------PSLSK  134 (308)
T ss_dssp             -HHHHHHHHGGG----CC-CTT--BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCC------CCHHH
T ss_pred             -HHHHHHHHHHH----cC-CCC--EeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCC------CCHHH
Confidence             12233333222    22 222  222222  22366799999999999999886432100  000000      01111


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          312 RLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                        ...+..+++.||.+||+.+++|||+||.|||++.++++||+|||+++.+..
T Consensus       135 --~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~  185 (308)
T d1p4oa_         135 --MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE  185 (308)
T ss_dssp             --HHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGG
T ss_pred             --HHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccC
Confidence              123567788999999999999999999999999999999999999986643

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.79  E-value=6.7e-21  Score=181.57  Aligned_cols=143  Identities=20%  Similarity=0.244  Sum_probs=96.3

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCch-hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .-.+.||+|+||+||+|+. .+|+.||||+...... ..+                                        
T Consensus         8 ~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~----------------------------------------   47 (293)
T d1csna_           8 KVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQL----------------------------------------   47 (293)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCH----------------------------------------
T ss_pred             EEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHH----------------------------------------
Confidence            3457899999999999995 5899999998754321 111                                        


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLDLV  317 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  317 (433)
                       +.|.+.+..    +.+.+++..-.-+.......++||||+ |++|.+++......       ++...        ...+
T Consensus        48 -~~e~~~~~~----l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~-------~~~~~--------~~~i  106 (293)
T d1csna_          48 -RDEYRTYKL----LAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRK-------FSVKT--------VAMA  106 (293)
T ss_dssp             -HHHHHHHHH----TTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTC-------CCHHH--------HHHH
T ss_pred             -HHHHHHHHH----hcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccc-------hhhHH--------HHHH
Confidence             122222222    223333222122233456779999999 67888887653321       11111        1235


Q ss_pred             HHHHHHHHHHHHHCCccccCCCCCceEEcc-----CCcEEEEecccccccC
Q 013944          318 NKGVEATLVQLLETGILHADPHPGNLRYTS-----SGQIGFLDFGLLCRME  363 (433)
Q Consensus       318 ~~~i~~~l~~lh~~givH~DlhpgNilv~~-----~g~l~l~DFGl~~~l~  363 (433)
                      ..++..++.++|+.|++|||+||+||+++.     ++.++++|||+++.+.
T Consensus       107 ~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_         107 AKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             HHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             HHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence            667888999999999999999999999964     5789999999997653

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.3e-20  Score=178.48  Aligned_cols=145  Identities=17%  Similarity=0.174  Sum_probs=95.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCc-----hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL-----RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGL  232 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~-----~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l  232 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.+...     ...+.+                                 
T Consensus        12 Y~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~---------------------------------   58 (318)
T d3blha1          12 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR---------------------------------   58 (318)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHH---------------------------------
T ss_pred             EEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHH---------------------------------
Confidence            44457899999999999996 689999999875321     111222                                 


Q ss_pred             HhhhchHHHHHHHHHHHHhcCCCCCeEeceeecc-------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhh
Q 013944          233 VGELDYTLEAANASEFQESHSPFPFIHVPKVFRY-------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQ  305 (433)
Q Consensus       233 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~  305 (433)
                              |...+.+    +++.+.+.+..++..       .....++||||++++.+..........+        +. 
T Consensus        59 --------E~~il~~----l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~--------~~-  117 (318)
T d3blha1          59 --------EIKILQL----LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT--------LS-  117 (318)
T ss_dssp             --------HHHHHHH----CCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCC--------HH-
T ss_pred             --------HHHHHHH----hcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccc--------cH-
Confidence                    2222222    222222233232211       1234689999999876654443222211        11 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          306 KLDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       306 ~~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                             ....+..++..++.+||+.|++|||+||.|||++.+|.++++|||++..+..
T Consensus       118 -------~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~  169 (318)
T d3blha1         118 -------EIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL  169 (318)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC
T ss_pred             -------HHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeeccc
Confidence                   1234667889999999999999999999999999999999999999987654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9.1e-20  Score=174.46  Aligned_cols=141  Identities=20%  Similarity=0.237  Sum_probs=94.9

Q ss_pred             ccCCccccccccceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          159 FISEEPVAAASFGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ++-.+.||+|+||+||+|++ +|+.||||+.+..-......+                                      
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~~~~~e--------------------------------------   45 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--------------------------------------   45 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHH--------------------------------------
T ss_pred             EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhHHHHH--------------------------------------
Confidence            34567899999999999986 799999998864322111000                                      


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecccC------CceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYLS------RKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWR  312 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~------~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  312 (433)
                       .|..       ......+-+|-+.+....      ...+|||||+++++|.+++.... .+              +...
T Consensus        46 -~ei~-------~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-l~--------------~~~~  102 (303)
T d1vjya_          46 -AEIY-------QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-VT--------------VEGM  102 (303)
T ss_dssp             -HHHH-------TSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCC-BC--------------HHHH
T ss_pred             -HHHH-------HHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcCC-CC--------------HHHH
Confidence             0111       111111112222332211      24689999999999999997431 11              1111


Q ss_pred             HHHHHHHHHHHHHHHHHH--------CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          313 LLDLVNKGVEATLVQLLE--------TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       313 l~~l~~~~i~~~l~~lh~--------~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      +  .+..+++.++.++|.        .||+|||+||+|||++.+|.+||+|||+++.+.
T Consensus       103 ~--~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~  159 (303)
T d1vjya_         103 I--KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  159 (303)
T ss_dssp             H--HHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred             H--HHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcccccc
Confidence            1  255667889999996        599999999999999999999999999988663

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9e-21  Score=182.03  Aligned_cols=186  Identities=19%  Similarity=0.136  Sum_probs=109.1

Q ss_pred             CccccccccceeEEEEec-CCC--EEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          162 EEPVAAASFGQVYRGSTL-DGS--IVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       162 ~~pigsgS~gqVy~a~l~-~G~--~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      .+.||+|+||.||+|+++ +|.  .||||..+......   +.+                                  +|
T Consensus        15 ~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~---~~~----------------------------------~~   57 (309)
T d1fvra_          15 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHR----------------------------------DF   57 (309)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------C----------------------------------HH
T ss_pred             EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChH---HHH----------------------------------HH
Confidence            468999999999999964 565  47778765432221   000                                  12


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhhhccCCCCCCCC--chhhhhhhHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSS--THLDRQKLDAKWRLL  314 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~l~  314 (433)
                      .+|.+.+.+    +.++++  |.+++..  ..+..++||||++|++|.+++............  .......+.....  
T Consensus        58 ~~E~~~l~~----l~~Hpn--Iv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~--  129 (309)
T d1fvra_          58 AGELEVLCK----LGHHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL--  129 (309)
T ss_dssp             HHHHHHHTT----CCCCTT--BCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHH--
T ss_pred             HHHHHHHHh----ccCCCC--EeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHH--
Confidence            223333222    112222  3333332  235679999999999999998643110000000  0000011111111  


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHH------------HHHHHHHHHHHhcCH
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQ------------FAMLASIVHIVNGDW  382 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~------------~~~~~~~~~~~~~d~  382 (433)
                      ..+..+++.|+.++|+.|++|||+||.|||++.++.++|+|||+++.......            ...+..-......|.
T Consensus       130 ~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDv  209 (309)
T d1fvra_         130 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDV  209 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccccccceecCCcccchHHhccCCCCcccee
Confidence            23567788999999999999999999999999999999999999875532211            111111111234577


Q ss_pred             HHHHHHHHhc
Q 013944          383 QSLVHSLTEM  392 (433)
Q Consensus       383 ~~~~~~l~~~  392 (433)
                      |+++-.+++|
T Consensus       210 wSfGvil~el  219 (309)
T d1fvra_         210 WSYGVLLWEI  219 (309)
T ss_dssp             HHHHHHHHHH
T ss_pred             ehhHHHHHHH
Confidence            7777777775

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=6e-20  Score=175.53  Aligned_cols=145  Identities=23%  Similarity=0.321  Sum_probs=95.0

Q ss_pred             CCccccccccceeEEEEe-cC-CCEEEEEEcCCCc-----hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhH
Q 013944          161 SEEPVAAASFGQVYRGST-LD-GSIVAVKVQRPNL-----RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLV  233 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~-G~~VAVKv~~p~~-----~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  233 (433)
                      -.+.||+|+||.||+|+. ++ |+.||||+.+...     .....+++.+++                            
T Consensus        11 i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~----------------------------   62 (305)
T d1blxa_          11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR----------------------------   62 (305)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHH----------------------------
T ss_pred             EEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHH----------------------------
Confidence            345799999999999996 44 6779999875422     222223333332                            


Q ss_pred             hhhchHHHHHHHHHHHHhcCCCCCeEeceeecc-------cCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhh
Q 013944          234 GELDYTLEAANASEFQESHSPFPFIHVPKVFRY-------LSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQK  306 (433)
Q Consensus       234 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~  306 (433)
                                   .+.. +. ++  .+.+++..       .....+++|||++|+.+..........       .++.  
T Consensus        63 -------------~l~~-~~-Hp--nIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-------~~~~--  116 (305)
T d1blxa_          63 -------------HLET-FE-HP--NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG-------VPTE--  116 (305)
T ss_dssp             -------------HHHH-TC-CT--TBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTC-------SCHH--
T ss_pred             -------------HHhh-cC-CC--CcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCC-------CCHH--
Confidence                         1111 11 11  12222222       124569999999998765443322110       1111  


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHH
Q 013944          307 LDAKWRLLDLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERK  365 (433)
Q Consensus       307 ~~~~~~l~~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~  365 (433)
                            ....+..+++.+|.|||+.|++|||+||+|||++.+|.++++|||++......
T Consensus       117 ------~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~  169 (305)
T d1blxa_         117 ------TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ  169 (305)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGG
T ss_pred             ------HHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhccc
Confidence                  12246678889999999999999999999999999999999999998876543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.6e-20  Score=182.23  Aligned_cols=191  Identities=16%  Similarity=0.133  Sum_probs=109.0

Q ss_pred             CCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      ..+.||+|+||.||+|+. .+|+.||||+.+......-  +...+                                  .
T Consensus        21 i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~--~~~~~----------------------------------~   64 (355)
T d2b1pa1          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT--HAKRA----------------------------------Y   64 (355)
T ss_dssp             EEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHH--HHHHH----------------------------------H
T ss_pred             EEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHH--HHHHH----------------------------------H
Confidence            456899999999999996 5899999999865432211  11111                                  1


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeec-----ccCCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHH
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFR-----YLSRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLL  314 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~-----~~~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~  314 (433)
                      +|...+.+    +.+..-+..-.++.     +..+..++||||+.|+.+..+..   ..        ++.        ..
T Consensus        65 ~Ei~il~~----l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~---~~--------~~~--------~i  121 (355)
T d2b1pa1          65 RELVLMKC----VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM---EL--------DHE--------RM  121 (355)
T ss_dssp             HHHHHHHH----CCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CC--------CHH--------HH
T ss_pred             HHHHHHHh----cCCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhhc---CC--------CHH--------HH
Confidence            12222211    22111111111111     12356699999998876554421   11        111        12


Q ss_pred             HHHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHhcCC
Q 013944          315 DLVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFAMLASIVHIVNGDWQSLVHSLTEMDV  394 (433)
Q Consensus       315 ~l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~g~  394 (433)
                      ..+..++..++.+||+.|++|||+||.|||++.++.++++|||+++...........      .....+...+.+... .
T Consensus       122 ~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~------~~t~~y~aPE~l~~~-~  194 (355)
T d2b1pa1         122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY------VVTRYYRAPEVILGM-G  194 (355)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------------------CCTTCCHHHHTTC-C
T ss_pred             HHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccccccccccc------cccccccChhhhcCC-C
Confidence            346778899999999999999999999999999999999999998877654432211      111122333444443 3


Q ss_pred             CCCCCChHHHHHHHHHHh-hchhc
Q 013944          395 VRPGTNTLRVTMDLEDAL-GEVEF  417 (433)
Q Consensus       395 ~~~~~d~~~~~~~l~~~l-~~~~~  417 (433)
                      ..+..|+|+++-.+.+++ |..+|
T Consensus       195 ~~~~~DiwSlG~~l~ell~g~~pF  218 (355)
T d2b1pa1         195 YKENVDIWSVGCIMGEMVRHKILF  218 (355)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             CCCCcccccccchHHHHhhCCCCC
Confidence            466788888877776665 55554

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.5e-19  Score=173.38  Aligned_cols=147  Identities=17%  Similarity=0.174  Sum_probs=95.0

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhch
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDY  238 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~  238 (433)
                      ...+.||+|+||+||+|+. .+|+.||||+.++.-.....   ..                                  +
T Consensus        11 ~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~---~~----------------------------------~   53 (345)
T d1pmea_          11 TNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC---QR----------------------------------T   53 (345)
T ss_dssp             EEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHH---HH----------------------------------H
T ss_pred             EEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHH---HH----------------------------------H
Confidence            3447899999999999985 68999999998753222110   00                                  1


Q ss_pred             HHHHHHHHHHHHhcCCCCCeEeceeeccc---CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHHHHHH
Q 013944          239 TLEAANASEFQESHSPFPFIHVPKVFRYL---SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKWRLLD  315 (433)
Q Consensus       239 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~  315 (433)
                      .+|...+..    +.+..-+.+-.++...   ....+++|+++.|++|.+++... +++        +.        .+.
T Consensus        54 ~~Ei~il~~----l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~-~l~--------~~--------~i~  112 (345)
T d1pmea_          54 LREIKILLR----FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ-HLS--------ND--------HIC  112 (345)
T ss_dssp             HHHHHHHHH----CCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHC-CCC--------HH--------HHH
T ss_pred             HHHHHHHHH----cCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcC-CCC--------HH--------HHH
Confidence            122222222    2222222233333221   12345566677899999998642 222        11        223


Q ss_pred             HHHHHHHHHHHHHHHCCccccCCCCCceEEccCCcEEEEecccccccCH
Q 013944          316 LVNKGVEATLVQLLETGILHADPHPGNLRYTSSGQIGFLDFGLLCRMER  364 (433)
Q Consensus       316 l~~~~i~~~l~~lh~~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~  364 (433)
                      .+..++..+|.|||+.|++|||+||+|||++.+|.++|+|||++.....
T Consensus       113 ~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~  161 (345)
T d1pmea_         113 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  161 (345)
T ss_dssp             HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence            4677888999999999999999999999999999999999999876644

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=6.8e-19  Score=167.77  Aligned_cols=142  Identities=19%  Similarity=0.220  Sum_probs=93.7

Q ss_pred             cCCccccccccceeEEEEe-cCCCEEEEEEcCCCch-hhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhc
Q 013944          160 ISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNLR-HVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELD  237 (433)
Q Consensus       160 ~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~~-~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  237 (433)
                      .-.+.||+|+||.||+|+. .+|+.||||+.+.... ..+.                                       
T Consensus        10 ~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~---------------------------------------   50 (299)
T d1ckia_          10 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH---------------------------------------   50 (299)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHH---------------------------------------
T ss_pred             EEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHH---------------------------------------
Confidence            3457899999999999995 5899999998764322 1221                                       


Q ss_pred             hHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcchhhhhcc-CCCCCCCCchhhhhhhHHHHHHHHH
Q 013944          238 YTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPTDLISLST-GSSVDGSSTHLDRQKLDAKWRLLDL  316 (433)
Q Consensus       238 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l  316 (433)
                        .|.+-+.    .+.+.+.+..-..+.......++||||+.| .+.+...... .++        +.        ....
T Consensus        51 --~E~~i~~----~l~~~~~i~~~~~~~~~~~~~~ivme~~~~-~l~~~~~~~~~~~~--------~~--------~~~~  107 (299)
T d1ckia_          51 --IESKIYK----MMQGGVGIPTIRWCGAEGDYNVMVMELLGP-SLEDLFNFCSRKFS--------LK--------TVLL  107 (299)
T ss_dssp             --HHHHHHH----HSTTSTTCCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTCCC--------HH--------HHHH
T ss_pred             --HHHHHHH----HccCCCcccEEEEEEecCCEEEEEEEEcCC-chhhhhhhccCCCc--------HH--------HHHH
Confidence              1222221    223333333223333345677999999965 4555443321 121        11        1123


Q ss_pred             HHHHHHHHHHHHHHCCccccCCCCCceEEcc---CCcEEEEecccccccC
Q 013944          317 VNKGVEATLVQLLETGILHADPHPGNLRYTS---SGQIGFLDFGLLCRME  363 (433)
Q Consensus       317 ~~~~i~~~l~~lh~~givH~DlhpgNilv~~---~g~l~l~DFGl~~~l~  363 (433)
                      +..+++.+|.+||+.|++|||+||+||+++.   +..++++|||+++.+.
T Consensus       108 ~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_         108 LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred             HHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecc
Confidence            5677889999999999999999999999863   4579999999998653

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=1.8e-17  Score=161.74  Aligned_cols=156  Identities=17%  Similarity=0.207  Sum_probs=92.5

Q ss_pred             ccCCccccccccceeEEEEe-cCCCEEEEEEcCCCc--hhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhh
Q 013944          159 FISEEPVAAASFGQVYRGST-LDGSIVAVKVQRPNL--RHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGE  235 (433)
Q Consensus       159 ~~~~~pigsgS~gqVy~a~l-~~G~~VAVKv~~p~~--~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  235 (433)
                      |...+.||+|+||+||+|+. .+|+.||||+.+...  .+....++.+++.       +.                    
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~-------l~--------------------   67 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR-------VN--------------------   67 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHH-------HH--------------------
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHH-------hc--------------------
Confidence            44567999999999999995 589999999987542  1223333333331       10                    


Q ss_pred             hchHHHHHHHHHHHHhcCCCCCeEeceeeccc----CCceEEEeeccCCCCcchhhhhccCCCCCCCCchhhhhhhHHHH
Q 013944          236 LDYTLEAANASEFQESHSPFPFIHVPKVFRYL----SRKRVLTMEWMVGESPTDLISLSTGSSVDGSSTHLDRQKLDAKW  311 (433)
Q Consensus       236 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~~LVmE~i~G~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  311 (433)
                            +.|.......  ..+  .+++++...    ....+++|+++.+..............     .+.+        
T Consensus        68 ------~~~~~~~~~~--~~~--~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--------  124 (362)
T d1q8ya_          68 ------DADNTKEDSM--GAN--HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHR-----GIPL--------  124 (362)
T ss_dssp             ------HTCCSHHHHH--HHT--TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTS-----CCCH--------
T ss_pred             ------chhhhhhhhc--CcC--ceEEEEEEeeeccccceeeeeeeccccccccccccccccc-----CCcH--------
Confidence                  0011110000  001  123332221    234467777766554333222211100     0111        


Q ss_pred             HHHHHHHHHHHHHHHHHHH-CCccccCCCCCceEEccCC------cEEEEecccccccCH
Q 013944          312 RLLDLVNKGVEATLVQLLE-TGILHADPHPGNLRYTSSG------QIGFLDFGLLCRMER  364 (433)
Q Consensus       312 ~l~~l~~~~i~~~l~~lh~-~givH~DlhpgNilv~~~g------~l~l~DFGl~~~l~~  364 (433)
                      .....+..+++.++.++|+ .||+|||+||+|||++.+|      .++++|||.+.....
T Consensus       125 ~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~  184 (362)
T d1q8ya_         125 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE  184 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccc
Confidence            1223467788899999998 9999999999999998765      499999999876543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.71  E-value=5.9e-08  Score=88.03  Aligned_cols=161  Identities=12%  Similarity=0.086  Sum_probs=89.3

Q ss_pred             CCccccccc-cceeEEEEecCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhHhhhchH
Q 013944          161 SEEPVAAAS-FGQVYRGSTLDGSIVAVKVQRPNLRHVVVRDIYILRIGLGLLQKIAKRKSDLRLYADELGKGLVGELDYT  239 (433)
Q Consensus       161 ~~~pigsgS-~gqVy~a~l~~G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~  239 (433)
                      +-+|++.|. -++||+....+|..+++|..+++....+..+...++                                  
T Consensus        14 ~~~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~~l~~E~~~l~----------------------------------   59 (255)
T d1nd4a_          14 DWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLS----------------------------------   59 (255)
T ss_dssp             EEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHH----------------------------------
T ss_pred             ceEEcCCcccCCeEEEEEeCCCCEEEEEeCCccCHhHHHHHHHHHH----------------------------------
Confidence            345777765 579999988788889999998876554443333332                                  


Q ss_pred             HHHHHHHHHHHhcCCCCCeEeceeecc--cCCceEEEeeccCCCCcchhhh--------------hccCCCCCCCC-chh
Q 013944          240 LEAANASEFQESHSPFPFIHVPKVFRY--LSRKRVLTMEWMVGESPTDLIS--------------LSTGSSVDGSS-THL  302 (433)
Q Consensus       240 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LVmE~i~G~~L~~~l~--------------~~~~~~~~~~~-~~~  302 (433)
                             .+..     ..+.+|+++..  -.+..+++|||++|.++.+...              .-...+..... ...
T Consensus        60 -------~L~~-----~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~  127 (255)
T d1nd4a_          60 -------WLAT-----TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQ  127 (255)
T ss_dssp             -------HHHT-----TTCCBCCEEEEEECSSCEEEEEECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCC
T ss_pred             -------HHHh-----cCCCCCceeeecccccceEEEEEeeeccccccccccHHHHHHHHHHHHHHHccCChhhCCCccc
Confidence                   2221     24568998863  3356799999999987654210              00111111000 000


Q ss_pred             hhhhhHHHHHHHHH------------HHHHHHHHHHHHHH-------CCccccCCCCCceEEccCCcEEEEecccccccC
Q 013944          303 DRQKLDAKWRLLDL------------VNKGVEATLVQLLE-------TGILHADPHPGNLRYTSSGQIGFLDFGLLCRME  363 (433)
Q Consensus       303 ~~~~~~~~~~l~~l------------~~~~i~~~l~~lh~-------~givH~DlhpgNilv~~~g~l~l~DFGl~~~l~  363 (433)
                      ..............            ........+..+..       ..++|+|+||+||++++++.+.|+||+.+..-+
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~g~  207 (255)
T d1nd4a_         128 AKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVAD  207 (255)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEEE
T ss_pred             chhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcccCC
Confidence            00000000000000            00001122333433       248999999999999876667899999988766


Q ss_pred             HHHH
Q 013944          364 RKHQ  367 (433)
Q Consensus       364 ~~~~  367 (433)
                      +..-
T Consensus       208 ~~~D  211 (255)
T d1nd4a_         208 RYQD  211 (255)
T ss_dssp             THHH
T ss_pred             HHHH
Confidence            5543

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.38  E-value=7.7e-07  Score=86.38  Aligned_cols=110  Identities=17%  Similarity=0.099  Sum_probs=61.6

Q ss_pred             CCCCCHHHHHHHHHHHhCCChhhhccccCCccccccccceeEEEEec-CCCEEEEEEcCCCchhh---HHHHHHHHHHHH
Q 013944          133 IPPFPRSIAMKIIEEELGSPVESFFSFISEEPVAAASFGQVYRGSTL-DGSIVAVKVQRPNLRHV---VVRDIYILRIGL  208 (433)
Q Consensus       133 ~p~~~~~~~~~~l~~elg~~~~~~f~~~~~~pigsgS~gqVy~a~l~-~G~~VAVKv~~p~~~~~---~~~Dl~~l~~~~  208 (433)
                      ..|+..+.+.+.. ..+|.-...  ..+.-++||.|....||+.+.. +|+.|+||.-.|.++..   ...++.-     
T Consensus         5 ~e~Lt~~~~~~la-~~lg~~~~~--~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R-----   76 (392)
T d2pula1           5 YETLNESSAVALA-VKLGLFPSK--STLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDR-----   76 (392)
T ss_dssp             CCCCCHHHHHHHH-HHTTC-------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTH-----
T ss_pred             CccCCHHHHHHHH-HHcCCCCCC--CCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHH-----
Confidence            3455555554443 445531111  2334568999999999999864 57899999877654321   0000000     


Q ss_pred             HHHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCc
Q 013944          209 GLLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESP  283 (433)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L  283 (433)
                                                   ...|++-+..+..    .....+|++|..-....+++|||++|..+
T Consensus        77 -----------------------------~~~E~~~L~~~~~----~~p~~vP~v~~~d~~~~~lvmE~L~~~~~  118 (392)
T d2pula1          77 -----------------------------ARIESSALIRQGE----HVPHLVPRVFYSDTEMAVTVMEDLSHLKI  118 (392)
T ss_dssp             -----------------------------HHHHHHHHHHHHT----TCGGGSCCEEEEETTTTEEEECCCTTSEE
T ss_pred             -----------------------------HHHHHHHHHHhhh----hCCCCcceEEEEcCCCCEEEEeccCCccc
Confidence                                         0124433333322    23356899998766778999999988654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.29  E-value=2.8e-06  Score=76.85  Aligned_cols=38  Identities=24%  Similarity=0.292  Sum_probs=30.7

Q ss_pred             CccccCCCCCceEEccCCcEEEEecccccccCHHHHHH
Q 013944          332 GILHADPHPGNLRYTSSGQIGFLDFGLLCRMERKHQFA  369 (433)
Q Consensus       332 givH~DlhpgNilv~~~g~l~l~DFGl~~~l~~~~~~~  369 (433)
                      .++|+|+||+||++++++.+.++||+.+..-++..-.+
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g~~~~Dla  221 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYDIA  221 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCEEEEHHHHHH
T ss_pred             EEEEeeccCcceeecCCceEEEeechhcccCCHHHHHH
Confidence            48999999999999876556799999998776654433

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=2e-06  Score=81.16  Aligned_cols=29  Identities=31%  Similarity=0.415  Sum_probs=23.8

Q ss_pred             CCccccCCCCCceEEccCCcEEEEecccccc
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCR  361 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~  361 (433)
                      .+++|+|+||+|||++ +| ..++||+-++.
T Consensus       192 ~~liHgDlh~~NvL~~-~~-~~~IDFdd~~~  220 (325)
T d1zyla1         192 VLRLHGDCHAGNILWR-DG-PMFVDLDDARN  220 (325)
T ss_dssp             CEECCSSCSGGGEEES-SS-EEECCCTTCCE
T ss_pred             ceeecCCCCcccEEEe-CC-ceEEechhccc
Confidence            4789999999999996 34 45899997764

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.31  E-value=0.0004  Score=64.12  Aligned_cols=32  Identities=28%  Similarity=0.577  Sum_probs=28.3

Q ss_pred             CCccccCCCCCceEEccCCcEEEEeccccccc
Q 013944          331 TGILHADPHPGNLRYTSSGQIGFLDFGLLCRM  362 (433)
Q Consensus       331 ~givH~DlhpgNilv~~~g~l~l~DFGl~~~l  362 (433)
                      .|++|+|+|++|++++.++...++||+.+..-
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~~  214 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFACND  214 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             cccccCCcchhhhhcccccceeEecccccccc
Confidence            68999999999999988777799999988753

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.24  E-value=0.00069  Score=64.82  Aligned_cols=98  Identities=12%  Similarity=0.076  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHhCCChhhhc-cccCCccccccccceeEEEEecC--------CCEEEEEEcCCCchhhHHHHHHHHHHHHH
Q 013944          139 SIAMKIIEEELGSPVESFF-SFISEEPVAAASFGQVYRGSTLD--------GSIVAVKVQRPNLRHVVVRDIYILRIGLG  209 (433)
Q Consensus       139 ~~~~~~l~~elg~~~~~~f-~~~~~~pigsgS~gqVy~a~l~~--------G~~VAVKv~~p~~~~~~~~Dl~~l~~~~~  209 (433)
                      +.++++..+.++..|..+= +.+.-++++.|---++|+....+        ++.|++++-- +....+.+          
T Consensus        23 ~~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~idr----------   91 (395)
T d1nw1a_          23 ERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETESHL----------   91 (395)
T ss_dssp             HHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCHHHH----------
T ss_pred             HHHHHHHHHhCcccccCCCccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-CcchhhHH----------
Confidence            3455666666776665531 34556789889889999998643        3678888754 22221111          


Q ss_pred             HHHHHHhhcCCHHHHHHHHHHHhHhhhchHHHHHHHHHHHHhcCCCCCeEeceeecccCCceEEEeeccCCCCcc
Q 013944          210 LLQKIAKRKSDLRLYADELGKGLVGELDYTLEAANASEFQESHSPFPFIHVPKVFRYLSRKRVLTMEWMVGESPT  284 (433)
Q Consensus       210 ~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LVmE~i~G~~L~  284 (433)
                                                   ..|..++..+.+.     .+ .|++|....  ..+||||++|.++.
T Consensus        92 -----------------------------~~E~~i~~~ls~~-----gl-~Pkll~~~~--~g~I~efi~g~~l~  129 (395)
T d1nw1a_          92 -----------------------------VAESVIFTLLSER-----HL-GPKLYGIFS--GGRLEEYIPSRPLS  129 (395)
T ss_dssp             -----------------------------HHHHHHHHHHHHT-----TS-SSCEEEEET--TEEEECCCCEEECC
T ss_pred             -----------------------------HHHHHHHHHHHhC-----CC-CCeEEEEcC--CceEEEEeccccCC
Confidence                                         2244444444331     23 688887654  47899999997665