Citrus Sinensis ID: 014017

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430--
MASSVFHAPCGAPSIKQLECQKYVGLRPSVTLRFNCVKTKTVTTRRLVVTASKSHDGTTKKLGISDAECEAAVVAGNIPEAPPVPPKPAAPAGTPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEKR
cccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccEEEEEEEcccccccccccccccccccccHHHHHHHHHHHccccEEEEccccccccccccccccccccccHHHHHHHHHHHcccCEEEEEccccccccccccccccccccECcHHHHHHHHHHHHHHHHccccEEccccccccHHHHHHHHHHHccccccccHHHHHHHcccccccccHHcccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccEEEHHcHHHHHHHHHcccc
********PCGAPSIKQLECQKYVGLRPSVTLRFNCVKTKTVTTRRLVVTA*****************C*A****************************LPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCG***
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MASSVFHAPCGAPSIKQLECQKYVGLRPSVTLRFNCVKTKTVTTRRLVVTASKSHDGTTKKLGISDAECEAAVVAGNIPEAPPVPPKPAAPAGTPVVPSLPLSRRPRRNRKSPAMRASFQETNLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKVPDALKSPTGDEAYNDNGLVPRTIWLLKDRYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVSQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYVIRVIELYANYREALVEAQADESEGADILLVKPGLPYLDVIRLLRDKYPLPIAAYQVSGEYSMIKAGGALKMIDEQRVMMESLMCLRRAGADIILTYFALQAARCLCGEKR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Delta-aminolevulinic acid dehydratase, chloroplastic Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.confidentP43210
Delta-aminolevulinic acid dehydratase, chloroplastic Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.confidentQ5Z8V9
Delta-aminolevulinic acid dehydratase, chloroplastic Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.confidentQ9SFH9

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.2.-.-Carbon-oxygen lyases.probable
4.2.1.-Hydro-lyases.probable
4.2.1.24Porphobilinogen synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3OBK, chain A
Confidence level:very confident
Coverage over the Query: 89-429
View the alignment between query and template
View the model in PyMOL