Citrus Sinensis ID: 014058
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 431 | 2.2.26 [Sep-21-2011] | |||||||
| Q43866 | 584 | Beta-fructofuranosidase, | yes | no | 0.902 | 0.666 | 0.565 | 1e-127 | |
| Q67XZ3 | 594 | Beta-fructofuranosidase, | no | no | 0.842 | 0.611 | 0.580 | 1e-125 | |
| P26792 | 592 | Beta-fructofuranosidase, | N/A | no | 0.928 | 0.675 | 0.546 | 1e-123 | |
| Q70XE6 | 606 | Fructan 6-exohydrolase OS | N/A | no | 0.842 | 0.599 | 0.550 | 1e-121 | |
| Q43089 | 555 | Beta-fructofuranosidase, | N/A | no | 0.923 | 0.717 | 0.533 | 1e-120 | |
| Q8W4S6 | 550 | Beta-fructofuranosidase, | no | no | 0.851 | 0.667 | 0.562 | 1e-119 | |
| Q1PEF8 | 590 | Beta-fructofuranosidase, | no | no | 0.937 | 0.684 | 0.519 | 1e-118 | |
| Q9LIB9 | 572 | Beta-fructofuranosidase, | no | no | 0.842 | 0.634 | 0.555 | 1e-117 | |
| Q39692 | 592 | Beta-fructofuranosidase, | N/A | no | 0.916 | 0.667 | 0.501 | 1e-115 | |
| Q8W413 | 591 | Beta-fructofuranosidase, | no | no | 0.881 | 0.642 | 0.519 | 1e-114 |
| >sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1 OS=Arabidopsis thaliana GN=CWINV1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/398 (56%), Positives = 280/398 (70%), Gaps = 9/398 (2%)
Query: 24 IANGAHQSEACYGTNQKL-QSLQVSAPA-NQPYLTSYHFRPPQNWINDPNGPMYYKGVYH 81
I N EA + ++L QS +P+ NQPY T +HF+PP+NW+NDPNGPM YKG+YH
Sbjct: 19 IGNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYH 78
Query: 82 LFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141
LFYQ+NP G ++G+ ++WAHS S DLINW A+ PS P+DIN CWSGS TILP KP
Sbjct: 79 LFYQWNPKGAVWGN-IVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKP 137
Query: 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTTAW 199
ILYTGID QQVQN+A P+NLSDP L++W K NP+M P NG+ FRDPTTAW
Sbjct: 138 VILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAW 197
Query: 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSING 259
D +WRV++G +I G+A Y S DF+ W K PL+ +GMWECPD FPV+ G
Sbjct: 198 LGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFG 257
Query: 260 TIGVDTSVL---NPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYD 316
+ GV+TS N +KHVLK SL KHDYY +GTYD D F PD F + RYD
Sbjct: 258 SNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYD 317
Query: 317 YGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQW 376
YGK+YASKTFFDSAKNRR+LW W NES S +DD++KGWSG+QT+PR IWLD+SGKQL+QW
Sbjct: 318 YGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQW 377
Query: 377 PVEEIETLRGKQV-SIHDKELGSGSIVEVSGITASQVN 413
PV E+E LR KQV ++ +K L SGS +EV G+TA+Q +
Sbjct: 378 PVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQAD 415
|
Beta-fructofuranosidase that can use sucrose and 1-kestose, and, to a lower extent, neokestose and levan, as substrates, but not inuline. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|Q67XZ3|INV3_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV3 OS=Arabidopsis thaliana GN=CWINV3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/367 (58%), Positives = 266/367 (72%), Gaps = 4/367 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T YHF+P +NW+NDPNGPM YKG+YHLFYQYNP G ++ +++W HS S DL+NW
Sbjct: 35 NQPYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNW 94
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
I A PS P DIN CWSGSVTILP KP ILYTGID + QVQN+A+P N+SDP L+
Sbjct: 95 ISQPPAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLR 154
Query: 171 DWVKFSGNPVMT--PPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN-EGMAFVYWSWD 227
+W K NP+MT NG+ D FRDPTTAW DG WRV+VG D+ G+A +Y S D
Sbjct: 155 EWSKPPQNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRD 214
Query: 228 FIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDT-SVLNPGVKHVLKTSLFSDKHD 286
F +WT+ PL+ TGMWECPD FPVSI G+ GV+T SV G+KHVLK SL HD
Sbjct: 215 FFNWTQSMKPLHYEDLTGMWECPDFFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHD 274
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +G+YD + D++ PD F N + R DYGK+YASKTF+D K RR+LW W NES
Sbjct: 275 YYTIGSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPA 334
Query: 347 QDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG 406
+DDI+KGWSG+Q+ PR IWLD+SGK+L+QWP+EEIETLRG+QV+ K L +GS ++V G
Sbjct: 335 KDDIEKGWSGLQSFPRKIWLDESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHG 394
Query: 407 ITASQVN 413
+TA+Q +
Sbjct: 395 VTAAQAD 401
|
6-fructan exohydrolase that can use phlein, levan, neokestose, levanbiose, 6-kestose, and 1-kestose as substrates. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 0 |
| >sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1 OS=Daucus carota GN=INV1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/408 (54%), Positives = 274/408 (67%), Gaps = 8/408 (1%)
Query: 12 PALMVLLCCFLLIANGAHQS--EACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIND 69
P L LL L+ H + EA + + LQS+ Q + T YHF+P QNWIND
Sbjct: 16 PFLQSLLAILLVTTTTLHINGVEAFHEIHYNLQSVGAEN-VKQVHRTGYHFQPKQNWIND 74
Query: 70 PNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129
PNGPMYYKGVYHLFYQYNP G ++G+ ++WAHSVS DLINW L A+ PS P+D C
Sbjct: 75 PNGPMYYKGVYHLFYQYNPKGAVWGN-IVWAHSVSTDLINWTPLEPAIFPSKPFDKYGCR 133
Query: 130 SGSVTILPGDKPFILYTGI---DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNG 186
SGS TILPG+KP ILYTGI QVQN A+P NLSDP L+ W+K NP++ NG
Sbjct: 134 SGSATILPGNKPVILYTGIVEGPPKNVQVQNYAIPANLSDPYLRKWIKPDNNPLVVANNG 193
Query: 187 VKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGM 246
FRDPTTAW G W++LVG + + G+A++Y S DFI WTK HP++S TGM
Sbjct: 194 ENATAFRDPTTAWLDKSGHWKMLVGSKRNRRGIAYLYRSKDFIKWTKAKHPIHSQANTGM 253
Query: 247 WECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDF 306
WECPD FPVS+ G G+DTSV VKHVLK SL +++YY +GTY D + PD
Sbjct: 254 WECPDFFPVSLKGLNGLDTSVTGESVKHVLKVSLDLTRYEYYTVGTYLTDKDRYIPDNTS 313
Query: 307 HGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWL 366
LRYDYG FYASKTFFD +KNRR+LW WANESDST D+ KGW+G+Q +PR +WL
Sbjct: 314 VDGWAGLRYDYGNFYASKTFFDPSKNRRILWGWANESDSTAHDVAKGWAGIQLIPRTLWL 373
Query: 367 DKSGKQLVQWPVEEIETLRGKQVSIHDKE-LGSGSIVEVSGITASQVN 413
D SGKQL+QWP+EE+ETLRG +V K+ L G +VEV GITA+Q +
Sbjct: 374 DPSGKQLMQWPIEELETLRGSKVKFSRKQDLSKGILVEVKGITAAQAD 421
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q70XE6|6FEH_BETVU Fructan 6-exohydrolase OS=Beta vulgaris GN=6-FEH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/367 (55%), Positives = 258/367 (70%), Gaps = 4/367 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
+ PY T+YHF+ P+NW+NDPNGPM YKG+YHLFYQY P P++ +++W HS S DLINW
Sbjct: 52 DDPYRTAYHFQSPKNWMNDPNGPMIYKGIYHLFYQYYPYDPVWHTEIVWGHSTSTDLINW 111
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
AL PS PYDIN CWSGS+TILP +KP ILYTGI+ QVQNLA+P+NLSDP LK
Sbjct: 112 TQQPIALSPSEPYDINGCWSGSITILPQNKPVILYTGINNKNYQVQNLALPKNLSDPYLK 171
Query: 171 DWVKFSGNPVM----TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSW 226
+W+K NP+M T N + FRDP+TAWQ DG+WRV+VG Q G+A ++ S
Sbjct: 172 EWIKLPQNPLMAGTPTNNNNINASSFRDPSTAWQLSDGKWRVIVGTQQGKRGLAVLFTSD 231
Query: 227 DFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHD 286
DF+ W +PL+S + G+WECPD FPV + ++G DTS++ VKHVLK SLF +++
Sbjct: 232 DFVKWNNTGNPLHSTEGNGIWECPDFFPVYVGKSLGADTSIIGDDVKHVLKLSLFDTQYE 291
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +G YD + DI+ PD + LRYDYGKFYASK+FFD NRR+LW W NES
Sbjct: 292 YYTIGRYDIEKDIYVPDEGSIESDLGLRYDYGKFYASKSFFDDETNRRILWGWVNESSIQ 351
Query: 347 QDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG 406
DDI KGWSGVQ +PR + LDKSGKQLVQWP+ E++ LR V + + + GS+VE+S
Sbjct: 352 ADDIKKGWSGVQAIPRTVVLDKSGKQLVQWPLAEVDMLRENDVELPSQVIKGGSLVEISQ 411
Query: 407 ITASQVN 413
ITASQ +
Sbjct: 412 ITASQAD 418
|
Hydrolyzes levan-type beta-(2->6)-linked fructans to fructose, but not inulin-type beta-(2->1)-linked fructans. Beta vulgaris (taxid: 161934) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 4 |
| >sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme OS=Pisum sativum GN=BFRUCT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/405 (53%), Positives = 274/405 (67%), Gaps = 7/405 (1%)
Query: 15 MVLLCCFLLI-ANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGP 73
+ LL F LI + Y T + L S S +QPY T+YHF+P +NWINDPNGP
Sbjct: 6 IFLLSLFSLIYVIPIEATHHVYQTLETLSSHHSSKSNHQPYRTAYHFQPLKNWINDPNGP 65
Query: 74 MYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSV 133
M Y G YHLFYQYNP G ++G+ ++WAHSVS DL+NW L HA+ PS P DI CWSGS
Sbjct: 66 MRYGGFYHLFYQYNPKGAVWGN-IVWAHSVSKDLVNWTPLDHAIHPSQPSDIKGCWSGSA 124
Query: 134 TILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP--PNGVKDDM 191
TILPG KP ILYTGID + QVQN+A+P+N+SDPLL++W K NP+M P N +
Sbjct: 125 TILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPLLREWKKSPKNPLMEPTIANKINSSS 184
Query: 192 FRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPD 251
FRDPTT+W DG WRVL+G +ID +GMA +Y S +F+ W + HPL+S + TGMWECPD
Sbjct: 185 FRDPTTSWLGKDGFWRVLIGSKIDTKGMAILYKSKNFVDWVEAKHPLHSAEGTGMWECPD 244
Query: 252 IFPVSINGTI--GVDTSVL-NPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHG 308
+PV + GVDTS + V+HVLK SL KHD+Y++G+YD D+F P+ F
Sbjct: 245 FYPVLDKNLLRTGVDTSRNGDDDVRHVLKVSLDDTKHDHYLIGSYDVVKDVFVPENGFED 304
Query: 309 NSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK 368
N LRYDYGK+YASKTFFD KNRR+L W NES S DD+ KGWSG+ T+PR IWL +
Sbjct: 305 NGFVLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDVKKGWSGIHTIPREIWLHE 364
Query: 369 SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
SGKQLVQWPV+EIE LR V+ K + G + ++G+ + Q +
Sbjct: 365 SGKQLVQWPVKEIENLRMNPVNWPTKVIKGGERISITGVDSVQAD 409
|
Pisum sativum (taxid: 3888) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q8W4S6|INV6_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV6 OS=Arabidopsis thaliana GN=CWINV6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/377 (56%), Positives = 266/377 (70%), Gaps = 10/377 (2%)
Query: 42 QSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGD-KMIWA 100
Q+L +A N+ TS+HF+P +NW+NDPN PMYYKG YHLFYQ NPL P F ++IW
Sbjct: 7 QNLLQTAVLNR---TSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWG 63
Query: 101 HSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASG-QQVQNLA 159
HSVS D++NWI L AL PS +DINSCWSGS TILP +P ILYTG+D + QQV +A
Sbjct: 64 HSVSQDMVNWIQLEPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVA 123
Query: 160 MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--E 217
P+++SDPLL++WVK NPVM PP+ V + FRDPT AW+ DG+WRVL+G + + +
Sbjct: 124 EPKDVSDPLLREWVKPKYNPVMVPPSNVPFNCFRDPTEAWKGQDGKWRVLIGAKEKDTEK 183
Query: 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLK 277
GMA +Y S DF+ WTK PL + TGMWECPD FPVSI G GVDTSV N V+HVLK
Sbjct: 184 GMAILYRSDDFVQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRHVLK 243
Query: 278 TSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLW 337
S +D YV+G Y + + FS D +F S DLRYD+G FYASK FFDS KNRR+ W
Sbjct: 244 ASF--GGNDCYVIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINW 301
Query: 338 AWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHD-KEL 396
W E+DS +DD KGW+G+ T+PR IW+D SGK+L+QWP+EEI LR K VS+ D E
Sbjct: 302 GWVIETDSKEDDFKKGWAGLMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDDCYEF 361
Query: 397 GSGSIVEVSGITASQVN 413
+GS E+SGITA+Q +
Sbjct: 362 KTGSTFEISGITAAQAD 378
|
6 and 1-fructan exohydrolase that can degrade both inulin and levan-type fructans, such as phlein, levan, neokestose, levanbiose, 6-kestose, 1-kestose, inulin, and 1,1-nystose. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 0 |
| >sp|Q1PEF8|INV2_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV2 OS=Arabidopsis thaliana GN=CWINV2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/408 (51%), Positives = 276/408 (67%), Gaps = 4/408 (0%)
Query: 9 MTSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQP-YLTSYHFRPPQNWI 67
M++P +L +LI + +A + +KLQS S + P + T+YHF+PP++WI
Sbjct: 1 MSAPKFGYVLLLIVLINISNNGVDAFHKVFKKLQSKSTSLESVSPLHRTAYHFQPPRHWI 60
Query: 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINS 127
NDPN PM YKGVYHLFYQYNP G ++G+ ++WAHSVS DLINW L A+ PS +DIN
Sbjct: 61 NDPNAPMLYKGVYHLFYQYNPKGAVWGN-IVWAHSVSKDLINWEALEPAIYPSKWFDING 119
Query: 128 CWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187
WSGS T +PG P ILYTGI + Q+QN A+P++LSDP LK W+K NP++ P NG
Sbjct: 120 TWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPDNGE 179
Query: 188 KDDMFRDPTTAW-QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGM 246
FRDPTTAW DG WR+LVG + N G+A++Y S DF W K P++S ++TGM
Sbjct: 180 NGSAFRDPTTAWFNKKDGYWRMLVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTGM 239
Query: 247 WECPDIFPVSI-NGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD 305
WECPD FPVS+ + G+D S P KHVLK SL +++YY LGTYD + D + PD
Sbjct: 240 WECPDFFPVSVTDKKNGLDFSYDGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDGY 299
Query: 306 FHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365
+ LR+DYG +YASKTFFD NRR+LW WANESD+ QDD KGW+G+Q +PR I
Sbjct: 300 TPDGWDGLRFDYGNYYASKTFFDDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTIL 359
Query: 366 LDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
LD SGKQLV WP+EEIE+LRGK V + ++++ G EV GIT +QV+
Sbjct: 360 LDSSGKQLVFWPIEEIESLRGKNVQMTNQKMEMGQRFEVQGITPAQVD 407
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q9LIB9|INV5_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV5 OS=Arabidopsis thaliana GN=CWINV5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/367 (55%), Positives = 253/367 (68%), Gaps = 4/367 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFG-DKMIWAHSVSYDLIN 109
NQPY T YHF+PP+NW+NDPNGPM YKG+YHLFYQ+N G + +K +W H+ S DLIN
Sbjct: 39 NQPYRTGYHFQPPKNWMNDPNGPMIYKGIYHLFYQWNQNGAVMDVNKTVWGHATSTDLIN 98
Query: 110 WIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLL 169
WI LS A+ PS P DIN CWSGSVTILP KP ILYTG D +QVQNL P+NL+DP L
Sbjct: 99 WITLSPAIRPSRPSDINGCWSGSVTILPNGKPVILYTGNDRYNRQVQNLVKPKNLTDPYL 158
Query: 170 KDWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD 227
+ W K NP++TP N + FRDPTTAW DGRWR+ G Q G+A ++ S D
Sbjct: 159 RHWTKSPENPLVTPSPVNHINSSAFRDPTTAWFGRDGRWRITTGSQEGRRGLAILHTSKD 218
Query: 228 FIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLN-PGVKHVLKTSLFSDKHD 286
F+ W + PL+ TGMWECPD FPV+ + G+DTS + P VKHVLK SL +D
Sbjct: 219 FVIWKQSPKPLHYHDGTGMWECPDFFPVARTDSRGLDTSFSSGPMVKHVLKVSLTDTFND 278
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +GTYD D++ PD F + RYDYGKFYASKTF+DS RR+LW W NES
Sbjct: 279 YYTIGTYDEVRDVYVPDKGFVQDETAPRYDYGKFYASKTFYDSVNQRRILWGWVNESSPE 338
Query: 347 QDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG 406
+D+I KGW+G+Q +PR +WLD+SGK+LVQWPV+EIE LR QV +K L GS++EV G
Sbjct: 339 KDNIKKGWAGLQAIPRKVWLDESGKRLVQWPVKEIERLRTTQVKWGNKLLKGGSVMEVHG 398
Query: 407 ITASQVN 413
+TA Q +
Sbjct: 399 VTAPQAD 405
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39692|INV2_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 2 OS=Daucus carota GN=INV2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/405 (50%), Positives = 268/405 (66%), Gaps = 10/405 (2%)
Query: 15 MVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQP--YLTSYHFRPPQNWINDPNG 72
M+ L + I + ++Q LQ + N + T YHF+P ++WINDPNG
Sbjct: 19 MLFLSAVVFIFSLDVNIRGVEASHQVFPELQSVSAVNVQLVHRTGYHFQPKKHWINDPNG 78
Query: 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGS 132
PMYYKG YHLFYQYNP G ++G+ ++WAHS+S DLINW+ L A+ PS P+D CWSGS
Sbjct: 79 PMYYKGFYHLFYQYNPKGAVWGN-IVWAHSISKDLINWVALEPAIFPSKPFDKYGCWSGS 137
Query: 133 VTILPGDKPFILYTGI---DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKD 189
T+LPG KP I+YTGI QVQN A+P N SDP L++W+K NP++
Sbjct: 138 ATVLPGGKPVIMYTGIVTPSPVNTQVQNFAVPANYSDPYLREWIKPDNNPIVRA-RSENS 196
Query: 190 DMFRDPTTAWQAPDG-RWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWE 248
FRDPTTAW DG W++LVG + + G+A++Y S +F+ WTK HPL+S TGMWE
Sbjct: 197 SSFRDPTTAWF--DGVHWKILVGSRRKHRGIAYLYRSRNFLKWTKAKHPLHSKDRTGMWE 254
Query: 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHG 308
C D +PV+ G G+DTSV +KHVLK SL+S +++YY +G YD DI+ PD
Sbjct: 255 CLDFYPVAPKGMNGLDTSVTGQDIKHVLKVSLYSTRYEYYTVGEYDRDNDIYVPDNTSVD 314
Query: 309 NSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK 368
LRYDYG FYASKTFFD K RR+LW WANESDS QDD+ KGW+G+Q +PR +WLD
Sbjct: 315 GWAGLRYDYGNFYASKTFFDPDKQRRILWGWANESDSKQDDVQKGWAGIQLIPRKLWLDP 374
Query: 369 SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
+GKQL+QWP+EEI+ LRG+ V + + L +G +EV G+TA+Q +
Sbjct: 375 NGKQLIQWPIEEIQLLRGQNVHMGSQVLNTGEHIEVKGVTAAQAD 419
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q8W413|INV4_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV4 OS=Arabidopsis thaliana GN=CWINV4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/383 (51%), Positives = 263/383 (68%), Gaps = 3/383 (0%)
Query: 32 EACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGP 91
+A + ++LQS V + N + S+HF+PP++WINDPNGP+YYKG+YHLFYQYN G
Sbjct: 28 DAFHQIYEELQSESVES-VNHLHRPSFHFQPPKHWINDPNGPVYYKGLYHLFYQYNTKGA 86
Query: 92 LFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS 151
++G+ +IWAHSVS DL+NW L AL PS +DI WSGS+TI+PG P ILYTG++ +
Sbjct: 87 VWGN-IIWAHSVSKDLVNWEALEPALSPSKWFDIGGTWSGSITIVPGKGPIILYTGVNQN 145
Query: 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211
Q+QN A+PE+ SDP L+ W+K NP+ P + FRDPTTAW + DG WR +VG
Sbjct: 146 ETQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYTMNGSAFRDPTTAWFSKDGHWRTVVG 205
Query: 212 GQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSING-TIGVDTSVLNP 270
+ G+A++Y S DF HW K HP++S Q TGMWECPD FPVS+ G+D + P
Sbjct: 206 SKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGMWECPDFFPVSLTDFRNGLDLDYVGP 265
Query: 271 GVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSA 330
KHVLK SL +++YY LG YD + D + PD + LR+DYG FYASKTFFD
Sbjct: 266 NTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGNTPDGWEGLRFDYGNFYASKTFFDYK 325
Query: 331 KNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVS 390
KNRR+LW WANESD+ +DDI KGW+G+Q +PR + LD S KQLV WPVEEIE+LRG V
Sbjct: 326 KNRRILWGWANESDTVEDDILKGWAGLQVIPRTVLLDSSKKQLVFWPVEEIESLRGNYVR 385
Query: 391 IHDKELGSGSIVEVSGITASQVN 413
+++ ++ G +EV GIT +Q +
Sbjct: 386 MNNHDIKMGQRIEVKGITPAQAD 408
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 431 | ||||||
| 384371322 | 592 | cell wall invertase [Manihot esculenta] | 0.930 | 0.677 | 0.635 | 1e-153 | |
| 224092182 | 573 | predicted protein [Populus trichocarpa] | 0.909 | 0.684 | 0.633 | 1e-151 | |
| 357437395 | 580 | Beta-fructofuranosidase, insoluble isoen | 0.897 | 0.667 | 0.623 | 1e-145 | |
| 356552366 | 576 | PREDICTED: beta-fructofuranosidase, inso | 0.916 | 0.685 | 0.596 | 1e-142 | |
| 224092180 | 570 | predicted protein [Populus trichocarpa] | 0.911 | 0.689 | 0.602 | 1e-142 | |
| 356562173 | 626 | PREDICTED: fructan 6-exohydrolase-like [ | 0.865 | 0.595 | 0.616 | 1e-139 | |
| 53127612 | 578 | fructan 1-exohydrolase [Campanula rapunc | 0.853 | 0.636 | 0.612 | 1e-138 | |
| 359475944 | 574 | PREDICTED: beta-fructofuranosidase, inso | 0.897 | 0.674 | 0.570 | 1e-136 | |
| 13940209 | 581 | fructan 1-exohydrolase IIa [Cichorium in | 0.909 | 0.674 | 0.561 | 1e-133 | |
| 357437405 | 551 | Beta-fructofuranosidase, insoluble isoen | 0.844 | 0.660 | 0.602 | 1e-132 |
| >gi|384371322|gb|AFH77950.1| cell wall invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/406 (63%), Positives = 315/406 (77%), Gaps = 5/406 (1%)
Query: 9 MTSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIN 68
M + L+ LLC +L NG + +A + Q QS ++ P QPY TSYHF+PP+NW+N
Sbjct: 1 MEAIFLVGLLC--VLFNNGI-EVDASHSEFQNFQSHNLTVPETQPYRTSYHFQPPKNWLN 57
Query: 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128
DPNGPM YKG YHLFYQYNP G LF M+WAHSVS+DLINWIHL+HAL P+ P+DI SC
Sbjct: 58 DPNGPMLYKGFYHLFYQYNPNGALFDAGMVWAHSVSHDLINWIHLNHALYPTEPFDIKSC 117
Query: 129 WSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK 188
WSGSVTILPG+KP ILYTGI+A+ QVQNLAMP+NLSDPLLK+W+KFS NPV+TPP GV
Sbjct: 118 WSGSVTILPGNKPAILYTGINANDTQVQNLAMPKNLSDPLLKEWIKFSQNPVITPPTGVA 177
Query: 189 DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWE 248
D FRDPTTAW +G+W V+VG I++ GMA +Y S DF++W PL+S ++TGMWE
Sbjct: 178 KDDFRDPTTAWVDAEGKWNVIVGSLINDRGMAILYQSEDFVNWRMYKDPLHSKEKTGMWE 237
Query: 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHG 308
CPD FPVSIN T GVDTSV+NP VKHV+K S + HDYY++GTY P + + PDTDF
Sbjct: 238 CPDFFPVSINSTNGVDTSVMNPSVKHVMKASF--NSHDYYIIGTYVPGVQKYIPDTDFTS 295
Query: 309 NSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK 368
+ DLRYDYGKFYASKTFFDS KNRR+LW W NESDS++DD+ KGWSG+Q+ PR IWL++
Sbjct: 296 TNTDLRYDYGKFYASKTFFDSIKNRRILWGWVNESDSSEDDVRKGWSGLQSFPRQIWLNR 355
Query: 369 SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVNS 414
SG QLVQWPVEEI L KQVSI +K+L GS++E+ GITASQ ++
Sbjct: 356 SGSQLVQWPVEEINKLHDKQVSIQNKKLDGGSVLEIPGITASQADA 401
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092182|ref|XP_002309497.1| predicted protein [Populus trichocarpa] gi|222855473|gb|EEE93020.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/404 (63%), Positives = 310/404 (76%), Gaps = 12/404 (2%)
Query: 13 ALMVLLCCFLL---IANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIND 69
+V LCC L I A ++ C Q Q V Q Y TS+HF+PP+NW+N
Sbjct: 6 VFLVGLCCVLQSSGIEVEALENNGC----QNFQPHTVMMQEKQSYRTSFHFQPPRNWLN- 60
Query: 70 PNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129
GPM+YKGVYHLFYQYNP G LFGD MIWAHSVSYDLINWIHL+HALCP+ PYDINSCW
Sbjct: 61 --GPMWYKGVYHLFYQYNPYGALFGDFMIWAHSVSYDLINWIHLNHALCPTEPYDINSCW 118
Query: 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKD 189
SGS TILPG P ILYTGIDA+ QVQN+AMP+NLSDP L++W+KF+ NP+MTPP+GV+
Sbjct: 119 SGSATILPGKGPVILYTGIDANHCQVQNMAMPKNLSDPFLEEWIKFAQNPIMTPPDGVEG 178
Query: 190 DMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWEC 249
+ FRDPTTAW + DG+W V++G +N+GMA +Y S DF +WTK PLYS + TGMWEC
Sbjct: 179 NNFRDPTTAWLSHDGKWSVIIGSWNNNQGMAILYRSEDFFNWTKYQDPLYSTERTGMWEC 238
Query: 250 PDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGN 309
PD +PVS+N T GVDTSVLN GVKHV+K S + HDYY++GTY P+++ + PD DF G
Sbjct: 239 PDFYPVSVNSTDGVDTSVLNAGVKHVMKASF--NSHDYYMIGTYVPEIEKYIPDNDFTGT 296
Query: 310 SNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKS 369
DLRYD+GKFYASKTFFDS KNRR+LW W NESDS +DD+DKGWSG+Q++PR IWLD+S
Sbjct: 297 GMDLRYDHGKFYASKTFFDSVKNRRILWGWVNESDSIEDDMDKGWSGLQSIPRHIWLDRS 356
Query: 370 GKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
GKQLVQWP+EEI L GK+VS DK++ S SI EV GITA+Q +
Sbjct: 357 GKQLVQWPIEEINKLHGKKVSFLDKKIDSESIFEVQGITAAQAD 400
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357437395|ref|XP_003588973.1| Beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Medicago truncatula] gi|355478021|gb|AES59224.1| Beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 242/388 (62%), Positives = 294/388 (75%), Gaps = 1/388 (0%)
Query: 26 NGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQ 85
N + EA +N + ++ P QPY TSYHF+PPQNW+NDPN PMYYKGVYHLFYQ
Sbjct: 18 NSRNGIEASTCSNS-IDPIKYRIPKEQPYRTSYHFQPPQNWMNDPNAPMYYKGVYHLFYQ 76
Query: 86 YNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145
+NPL FGD ++WAHSVSYDLINWIHL+ AL PSGPYDINSCWSGS TILPG+KP ILY
Sbjct: 77 HNPLAATFGDIIVWAHSVSYDLINWIHLNIALEPSGPYDINSCWSGSATILPGEKPAILY 136
Query: 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205
TGID +VQNLA+P+NL+D L++W K NPVMTPP GV++D FRDP+TAW DG+
Sbjct: 137 TGIDHYKNEVQNLAIPKNLTDAFLREWEKHPQNPVMTPPTGVEEDNFRDPSTAWHGKDGK 196
Query: 206 WRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDT 265
WRV+VG Q +EG +Y S DF++WT +P ++ TG+ ECPD FPV IN T GVDT
Sbjct: 197 WRVIVGAQNGDEGKTILYQSEDFVNWTVNPNPFFATDNTGVCECPDFFPVYINSTNGVDT 256
Query: 266 SVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKT 325
SV N V+HVLK S +HDYY LG Y + F PD +F G S DLR+DYGKFYASK+
Sbjct: 257 SVDNSSVRHVLKISYLRKQHDYYFLGKYVSDKENFVPDVEFTGTSKDLRFDYGKFYASKS 316
Query: 326 FFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLR 385
FFD AKNRR+LW W NESDSTQDDI+KGW+G+QT+PR +WLDKSGK+L+QWP+EEIE LR
Sbjct: 317 FFDYAKNRRILWGWVNESDSTQDDIEKGWAGLQTIPRKVWLDKSGKRLMQWPIEEIENLR 376
Query: 386 GKQVSIHDKELGSGSIVEVSGITASQVN 413
KQ+SI ++L GS +E+SGI SQV+
Sbjct: 377 HKQISITGEKLEGGSTLEISGINVSQVD 404
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552366|ref|XP_003544539.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/404 (59%), Positives = 300/404 (74%), Gaps = 9/404 (2%)
Query: 12 PALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPN 71
P L++ + L+ +G G S+ P QPY TSYHF+P QNW+NDPN
Sbjct: 5 PELLLFVIVPFLLNSGN-------GIETSTHSINNRTPEKQPYRTSYHFQPRQNWMNDPN 57
Query: 72 GPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSG 131
GPMYYKGVYHLFYQ+NP FGD+++W HSVSYDLINWIHL++A+ PSGPYD NSCWSG
Sbjct: 58 GPMYYKGVYHLFYQHNPEAATFGDRIVWGHSVSYDLINWIHLNNAIEPSGPYDNNSCWSG 117
Query: 132 SVTILPG-DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDD 190
S TI+PG ++P ILYTGID QVQNLAMP NLSDP L++W+K NPVM+PP+GV+ +
Sbjct: 118 SATIIPGKEQPVILYTGIDDKKHQVQNLAMPRNLSDPFLREWIKHPQNPVMSPPSGVEVN 177
Query: 191 MFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECP 250
FRDP+TAWQ DG+WRV++G Q +EG +Y S DF++W +P Y+ TG+ ECP
Sbjct: 178 NFRDPSTAWQGKDGKWRVVIGAQNGDEGKTILYQSEDFVNWKVDPNPFYASDNTGVCECP 237
Query: 251 DIFPVSINGTI-GVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGN 309
D FPV+I+G+ GVDTSV NP V+HVLK S +HDYY LG Y + F PD F G
Sbjct: 238 DFFPVNISGSKNGVDTSVQNPSVRHVLKISYLRKQHDYYFLGKYVSDQENFIPDVRFTGT 297
Query: 310 SNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKS 369
S+DLRYDYGKFYASK+FFD AKNRR+LW W NESDSTQDDI+KGW+G+Q++PR +WLDKS
Sbjct: 298 SSDLRYDYGKFYASKSFFDYAKNRRILWGWVNESDSTQDDIEKGWAGLQSIPRQVWLDKS 357
Query: 370 GKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
GK+LVQWP+EE+E LR K +SI ++L GS +EVSGITASQ +
Sbjct: 358 GKRLVQWPIEEVEKLRDKHISIMGEKLVYGSNLEVSGITASQAD 401
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224092180|ref|XP_002309496.1| predicted protein [Populus trichocarpa] gi|222855472|gb|EEE93019.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/405 (60%), Positives = 305/405 (75%), Gaps = 12/405 (2%)
Query: 9 MTSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWIN 68
M + V+ C LL+ +G +A + +++ LQ +QPY T YHF+PP+NW+N
Sbjct: 1 MEISVIWVVGFCVLLVDHGV---QASHQSSRNLQE------TDQPYRTGYHFQPPKNWMN 51
Query: 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128
DPNGPMYYKGVYHLFYQYNP G ++G+ +IWAHSVSYDL+NW+H+ HA+ P+ P DIN C
Sbjct: 52 DPNGPMYYKGVYHLFYQYNPDGAVWGN-IIWAHSVSYDLVNWVHIDHAIYPTQPSDINGC 110
Query: 129 WSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK 188
WSGS TILPG+KP ILYTGID QVQNLA+P+NLSDPLLK+W K NP+MTP +G+
Sbjct: 111 WSGSTTILPGEKPAILYTGIDTKNHQVQNLAVPKNLSDPLLKEWKKSPYNPLMTPIDGID 170
Query: 189 DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWE 248
D++RDPTTAWQ PD WRV+VG QI+ G A +Y S DF++WT++D PL+S +T MWE
Sbjct: 171 PDLYRDPTTAWQGPDKIWRVIVGSQINGHGRAILYRSKDFVNWTRIDSPLHSSGKTEMWE 230
Query: 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHG 308
CPD FPVS + T GVDTS + KHVLK S + HDYY+LG+Y P+ D FS +T+F
Sbjct: 231 CPDFFPVSTSSTNGVDTSSQDKSTKHVLKASF--NHHDYYILGSYMPENDKFSVETNFMD 288
Query: 309 NSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK 368
+ DLRYDYGKFYASKTFFD A NRR+LW W NESDS DDI KGWSG+Q++PR + L K
Sbjct: 289 SGVDLRYDYGKFYASKTFFDGAMNRRILWGWINESDSESDDIKKGWSGLQSIPRTVLLSK 348
Query: 369 SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
+GKQ+VQWPV+EIE LR K VS HDK+L SGS++EV GITASQ +
Sbjct: 349 NGKQIVQWPVKEIEKLRSKNVSFHDKKLKSGSVLEVPGITASQAD 393
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356562173|ref|XP_003549346.1| PREDICTED: fructan 6-exohydrolase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 231/375 (61%), Positives = 284/375 (75%), Gaps = 2/375 (0%)
Query: 41 LQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWA 100
+ S++ P QPY T YHF+PPQNW+NDPN PMYYKGVYH FYQ+NP P FG+KM+WA
Sbjct: 77 INSIKFKVPEKQPYRTWYHFQPPQNWMNDPNAPMYYKGVYHFFYQHNPYAPTFGEKMVWA 136
Query: 101 HSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGD--KPFILYTGIDASGQQVQNL 158
HSVSYDLINWIHL+HA+ PS YDINSCWSGS TILPG+ +P ILYTGID + QVQN+
Sbjct: 137 HSVSYDLINWIHLNHAIEPSDSYDINSCWSGSATILPGEEEQPVILYTGIDNNKYQVQNM 196
Query: 159 AMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218
AMP++LSDP L++WVK NP MTPP+GV+ + FRDP+TAWQ DG+WRV++G Q +EG
Sbjct: 197 AMPKDLSDPFLREWVKHPQNPAMTPPSGVEVNNFRDPSTAWQGKDGKWRVVIGAQNGDEG 256
Query: 219 MAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKT 278
+Y S DF++W +P ++ TG+ ECPD FPVSIN T GVD SV + V+HVLK
Sbjct: 257 KTILYQSEDFVNWRVELNPFFATDNTGVCECPDFFPVSINSTNGVDASVQSQSVRHVLKI 316
Query: 279 SLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWA 338
S DYY LG Y F PD F G S+DLR DYGKFYASK+FFD AKNRR+LW
Sbjct: 317 SYLRRHQDYYFLGKYVYDEGNFVPDVKFTGTSSDLRLDYGKFYASKSFFDHAKNRRILWG 376
Query: 339 WANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGS 398
W NE D+ Q+DI+KGW+G+Q +PR +WLD+SGKQL+QWP+EEIE LR KQ+SI ++L
Sbjct: 377 WVNECDTRQNDIEKGWAGLQCIPRQVWLDESGKQLMQWPIEEIEKLRDKQISILGEKLVG 436
Query: 399 GSIVEVSGITASQVN 413
GSI+EVSGITASQ +
Sbjct: 437 GSIIEVSGITASQAD 451
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|53127612|emb|CAD49079.1| fructan 1-exohydrolase [Campanula rapunculoides] | Back alignment and taxonomy information |
|---|
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/372 (61%), Positives = 289/372 (77%), Gaps = 4/372 (1%)
Query: 43 SLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHS 102
S+ +S P++QPY T YHF+PPQNW+NDPNGPMYYKGVYH FYQYNP GPLFGD MIW HS
Sbjct: 34 SVHLSLPSDQPYRTGYHFQPPQNWMNDPNGPMYYKGVYHFFYQYNPNGPLFGDIMIWGHS 93
Query: 103 VSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPE 162
VSYDL+NWIH+ A+ P+ P DINSC+SGS T LPG KP +LYTG+D +QVQNLA+P+
Sbjct: 94 VSYDLVNWIHIDPAIYPTDPADINSCFSGSATFLPGYKPVMLYTGLDTEKRQVQNLAVPK 153
Query: 163 NLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222
NLSDP L++WVK NP+MT P GVK D FRDP+TAW DG+WRVLVG + ++ G+A++
Sbjct: 154 NLSDPFLREWVKHKANPIMTTPEGVKADDFRDPSTAWLGYDGKWRVLVGSKKNDLGVAYL 213
Query: 223 YWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTS-VLNPGVKHVLKTSLF 281
Y S DF+ W + D+PL S+ ET WECPD FPVS++ T G+DTS V+NPGVKHV+K
Sbjct: 214 YQSKDFVKWERFDYPLMSMMETSTWECPDFFPVSVSSTNGLDTSGVINPGVKHVVKVGF- 272
Query: 282 SDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWAN 341
+ D+Y +GT + D + P+ GNS D+RYDYGKFYASK+F+D+AK RRVLW W +
Sbjct: 273 -NGIDWYTIGTLS-ERDNYVPENGLKGNSLDMRYDYGKFYASKSFYDNAKQRRVLWGWIS 330
Query: 342 ESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSI 401
E+D+ +DD+ +GWSG+Q VPR++WLD++GKQLVQWPVEEIE LR +V +KEL GS+
Sbjct: 331 EADAQEDDVARGWSGLQAVPRSVWLDRNGKQLVQWPVEEIEKLRENEVKFSNKELEGGSL 390
Query: 402 VEVSGITASQVN 413
EV GITASQ +
Sbjct: 391 FEVEGITASQAD 402
|
Source: Campanula rapunculoides Species: Campanula rapunculoides Genus: Campanula Family: Campanulaceae Order: Asterales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475944|ref|XP_002278880.2| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/398 (57%), Positives = 302/398 (75%), Gaps = 11/398 (2%)
Query: 16 VLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMY 75
V LC FL A ++EA Y + + LQS P QPY T+YHF+PP+NW+NDPNGPMY
Sbjct: 9 VGLCLFL--ARHGIEAEASYPSCRNLQS----NPTEQPYRTAYHFQPPKNWMNDPNGPMY 62
Query: 76 YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTI 135
Y GVYHLFYQYNP ++G+ + WAHS+SYDL+NW+HL HAL P+ P+DIN CW+GS TI
Sbjct: 63 YNGVYHLFYQYNPYAAVWGN-ITWAHSISYDLVNWVHLDHALNPTDPFDINGCWTGSATI 121
Query: 136 LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDP 195
LPG++P I+YTG D +QVQN+A+P+N+SDPLL++W+K NP+M+P NG+ + FRDP
Sbjct: 122 LPGEEPVIIYTGADTQNRQVQNMAVPKNISDPLLREWIKSPRNPLMSPTNGIDANNFRDP 181
Query: 196 TTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPV 255
TTAWQ PD WR++VG I++ G A +Y S DF++WTK PL+S +TGMWECPD +PV
Sbjct: 182 TTAWQGPDKVWRIIVGSLINDHGTALLYRSRDFVNWTKSQTPLHSSNKTGMWECPDFYPV 241
Query: 256 SINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRY 315
S GV+TSV N +HVLK S + +DYY++G Y P+ D + +TDF +DLRY
Sbjct: 242 STR--TGVETSVQNADTQHVLKASF--NGNDYYIIGKYVPETDTYLVETDFLDAGSDLRY 297
Query: 316 DYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQ 375
DYG+FYASKTFFD+AK RR+LWAW ESDS+ DI+KGWSG+Q++PR++ LD++G+QLVQ
Sbjct: 298 DYGEFYASKTFFDAAKKRRILWAWIQESDSSSADIEKGWSGLQSIPRSVLLDQTGRQLVQ 357
Query: 376 WPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
WP++EIE LR QV++ +KE+ GS++EV GITASQV+
Sbjct: 358 WPIKEIEELRENQVTLLNKEVRGGSVLEVPGITASQVD 395
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|13940209|emb|CAC37922.1| fructan 1-exohydrolase IIa [Cichorium intybus] gi|32492892|gb|AAP85536.1| fructan 1-exohydrolase IIa [Cichorium intybus] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/401 (56%), Positives = 289/401 (72%), Gaps = 9/401 (2%)
Query: 17 LLCCFLLIANGAHQSEACYGTNQKLQSLQVSA--PANQPYLTSYHFRPPQNWINDPNGPM 74
++ CFL+I + +A T++ L + + A QPY T YHF+PP NW+NDPNGPM
Sbjct: 9 IVLCFLVIILETGRVKA---TSRNLNDVIMLANQQIEQPYRTGYHFQPPSNWMNDPNGPM 65
Query: 75 YYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVT 134
Y+GVYH FYQYNP FGD +IW H+VSYDL+NWIHL A+ P+ D SCWSGS T
Sbjct: 66 LYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSCWSGSAT 125
Query: 135 ILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRD 194
ILPG+ P +LYTG D+ +QVQ+LA P+NLSDP L++WVK NP++TPP GVKDD FRD
Sbjct: 126 ILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRD 185
Query: 195 PTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFP 254
P+TAW PDG WR++VGG DN GMAF+Y S DF++W + D PL S TG WECPD +P
Sbjct: 186 PSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYP 245
Query: 255 VSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDT--DFHGNSND 312
V +N T G+DTSV V+HV+K + HD+Y +GTY P + F P G++ D
Sbjct: 246 VPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTIGTYSPDRENFLPQNGLSLTGSTLD 303
Query: 313 LRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ 372
LRYDYG+FYASK+FFD AKNRRVLWAW E+DS DDI+KGW+G+Q+ PRA+W+D++GKQ
Sbjct: 304 LRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALWIDRNGKQ 363
Query: 373 LVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
L+QWPVEEIE LR QV++ +K L GS++E+ GI ASQ +
Sbjct: 364 LIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQAD 404
|
Source: Cichorium intybus Species: Cichorium intybus Genus: Cichorium Family: Asteraceae Order: Asterales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357437405|ref|XP_003588978.1| Beta-fructofuranosidase, insoluble isoenzyme [Medicago truncatula] gi|355478026|gb|AES59229.1| Beta-fructofuranosidase, insoluble isoenzyme [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/365 (60%), Positives = 276/365 (75%), Gaps = 1/365 (0%)
Query: 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFG-DKMIWAHSVSYDLI 108
+ QPY T YHF+P +NW+NDPNGPMYYKGVYHLFYQYNP FG +KM+W HS+S DLI
Sbjct: 15 SEQPYRTWYHFQPLKNWMNDPNGPMYYKGVYHLFYQYNPDAATFGHEKMVWGHSISNDLI 74
Query: 109 NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPL 168
NW HL+ A+ P+ P DINSCWSGS TILPG+KP +LYTGID + QVQNLAMP+NLSDP
Sbjct: 75 NWTHLNDAIVPTIPGDINSCWSGSATILPGEKPAMLYTGIDQNRHQVQNLAMPKNLSDPY 134
Query: 169 LKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
L++W K NP+MTPP+GV+ FRDP+TAWQ DG+WRV++G Q +EG +Y S DF
Sbjct: 135 LREWEKHPQNPLMTPPSGVEVGEFRDPSTAWQGKDGKWRVIIGAQNGDEGKIILYKSEDF 194
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYY 288
+ W P ++ +TG+ ECPD FPV IN T GVDT++ N V+HVLK S +HDYY
Sbjct: 195 VKWIVDPIPFFATDDTGVCECPDFFPVYINNTNGVDTTMENSSVRHVLKISYLRRRHDYY 254
Query: 289 VLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQD 348
+G Y + F PD + G +LR+DYGK YASK+FFD AKNRR+LWAWA ESD+++D
Sbjct: 255 FIGKYVSDKEEFVPDVKYTGTWKELRFDYGKVYASKSFFDHAKNRRILWAWAEESDTSED 314
Query: 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGIT 408
DI KGW+G+QT+PR WLDK+GKQL+QWP+EE+E LRGKQ++I + L SGS +EV GIT
Sbjct: 315 DIQKGWAGLQTIPRKFWLDKNGKQLMQWPIEELEKLRGKQINITGETLQSGSTLEVKGIT 374
Query: 409 ASQVN 413
ASQ +
Sbjct: 375 ASQAD 379
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 431 | ||||||
| TAIR|locus:2091606 | 584 | ATBFRUCT1 [Arabidopsis thalian | 0.907 | 0.669 | 0.567 | 3e-124 | |
| TAIR|locus:2205677 | 594 | FRUCT5 "beta-fructofuranosidas | 0.842 | 0.611 | 0.577 | 9.5e-121 | |
| TAIR|locus:2143099 | 550 | cwINV6 "6-&1-fructan exohydrol | 0.851 | 0.667 | 0.570 | 6.4e-115 | |
| TAIR|locus:2079944 | 590 | CWINV2 "cell wall invertase 2" | 0.937 | 0.684 | 0.519 | 2.5e-113 | |
| TAIR|locus:2049445 | 591 | cwINV4 "cell wall invertase 4" | 0.928 | 0.676 | 0.507 | 1.6e-111 | |
| TAIR|locus:2201966 | 664 | ATBETAFRUCT4 [Arabidopsis thal | 0.825 | 0.536 | 0.506 | 8.2e-99 | |
| TAIR|locus:2026177 | 648 | AT1G62660 [Arabidopsis thalian | 0.825 | 0.549 | 0.495 | 3.7e-96 | |
| UNIPROTKB|Q9FSV7 | 654 | 1-SST "Sucrose:sucrose 1-fruct | 0.821 | 0.541 | 0.424 | 6e-80 | |
| UNIPROTKB|Q4KBP1 | 499 | scrB "Sucrose-6-phosphate hydr | 0.751 | 0.649 | 0.317 | 1.2e-40 | |
| UNIPROTKB|Q48BH6 | 497 | scrB "Sucrose-6-phosphate hydr | 0.682 | 0.591 | 0.309 | 6.5e-35 |
| TAIR|locus:2091606 ATBFRUCT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1221 (434.9 bits), Expect = 3.0e-124, P = 3.0e-124
Identities = 227/400 (56%), Positives = 282/400 (70%)
Query: 22 LLIANGAHQSEACYGTNQKL-QSLQVSAPA-NQPYLTSYHFRPPQNWINDPNGPMYYKGV 79
LLI N EA + ++L QS +P+ NQPY T +HF+PP+NW+NDPNGPM YKG+
Sbjct: 17 LLIGNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGI 76
Query: 80 YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGD 139
YHLFYQ+NP G ++G+ ++WAHS S DLINW A+ PS P+DIN CWSGS TILP
Sbjct: 77 YHLFYQWNPKGAVWGN-IVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNG 135
Query: 140 KPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTT 197
KP ILYTGID QQVQN+A P+NLSDP L++W K NP+M P NG+ FRDPTT
Sbjct: 136 KPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTT 195
Query: 198 AWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI 257
AW D +WRV++G +I G+A Y S DF+ W K PL+ +GMWECPD FPV+
Sbjct: 196 AWLGQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTR 255
Query: 258 NGTIGVDTSVL---NPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLR 314
G+ GV+TS N +KHVLK SL KHDYY +GTYD D F PD F + R
Sbjct: 256 FGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPR 315
Query: 315 YDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLV 374
YDYGK+YASKTFFDSAKNRR+LW W NES S +DD++KGWSG+QT+PR IWLD+SGKQL+
Sbjct: 316 YDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLI 375
Query: 375 QWPVEEIETLRGKQV-SIHDKELGSGSIVEVSGITASQVN 413
QWPV E+E LR KQV ++ +K L SGS +EV G+TA+Q +
Sbjct: 376 QWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQAD 415
|
|
| TAIR|locus:2205677 FRUCT5 "beta-fructofuranosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1188 (423.3 bits), Expect = 9.5e-121, P = 9.5e-121
Identities = 212/367 (57%), Positives = 266/367 (72%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T YHF+P +NW+NDPNGPM YKG+YHLFYQYNP G ++ +++W HS S DL+NW
Sbjct: 35 NQPYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNW 94
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
I A PS P DIN CWSGSVTILP KP ILYTGID + QVQN+A+P N+SDP L+
Sbjct: 95 ISQPPAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLR 154
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWD 227
+W K NP+MT NG+ D FRDPTTAW DG WRV+VG D+ G+A +Y S D
Sbjct: 155 EWSKPPQNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRD 214
Query: 228 FIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNP-GVKHVLKTSLFSDKHD 286
F +WT+ PL+ TGMWECPD FPVSI G+ GV+TS + G+KHVLK SL HD
Sbjct: 215 FFNWTQSMKPLHYEDLTGMWECPDFFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHD 274
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +G+YD + D++ PD F N + R DYGK+YASKTF+D K RR+LW W NES
Sbjct: 275 YYTIGSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPA 334
Query: 347 QDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG 406
+DDI+KGWSG+Q+ PR IWLD+SGK+L+QWP+EEIETLRG+QV+ K L +GS ++V G
Sbjct: 335 KDDIEKGWSGLQSFPRKIWLDESGKELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHG 394
Query: 407 ITASQVN 413
+TA+Q +
Sbjct: 395 VTAAQAD 401
|
|
| TAIR|locus:2143099 cwINV6 "6-&1-fructan exohydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
Identities = 215/377 (57%), Positives = 267/377 (70%)
Query: 42 QSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFG-DKMIWA 100
Q+L +A N+ TS+HF+P +NW+NDPN PMYYKG YHLFYQ NPL P F ++IW
Sbjct: 7 QNLLQTAVLNR---TSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWG 63
Query: 101 HSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASG-QQVQNLA 159
HSVS D++NWI L AL PS +DINSCWSGS TILP +P ILYTG+D + QQV +A
Sbjct: 64 HSVSQDMVNWIQLEPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVA 123
Query: 160 MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG-QIDNE- 217
P+++SDPLL++WVK NPVM PP+ V + FRDPT AW+ DG+WRVL+G + D E
Sbjct: 124 EPKDVSDPLLREWVKPKYNPVMVPPSNVPFNCFRDPTEAWKGQDGKWRVLIGAKEKDTEK 183
Query: 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLK 277
GMA +Y S DF+ WTK PL + TGMWECPD FPVSI G GVDTSV N V+HVLK
Sbjct: 184 GMAILYRSDDFVQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRHVLK 243
Query: 278 TSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLW 337
S F +D YV+G Y + + FS D +F S DLRYD+G FYASK FFDS KNRR+ W
Sbjct: 244 AS-FGG-NDCYVIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINW 301
Query: 338 AWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHD-KEL 396
W E+DS +DD KGW+G+ T+PR IW+D SGK+L+QWP+EEI LR K VS+ D E
Sbjct: 302 GWVIETDSKEDDFKKGWAGLMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDDCYEF 361
Query: 397 GSGSIVEVSGITASQVN 413
+GS E+SGITA+Q +
Sbjct: 362 KTGSTFEISGITAAQAD 378
|
|
| TAIR|locus:2079944 CWINV2 "cell wall invertase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 212/408 (51%), Positives = 275/408 (67%)
Query: 9 MTSPALMVLLCCFLLIANGAHQSEACYGTNQKLQSLQVSAPANQP-YLTSYHFRPPQNWI 67
M++P +L +LI + +A + +KLQS S + P + T+YHF+PP++WI
Sbjct: 1 MSAPKFGYVLLLIVLINISNNGVDAFHKVFKKLQSKSTSLESVSPLHRTAYHFQPPRHWI 60
Query: 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINS 127
NDPN PM YKGVYHLFYQYNP G ++G+ ++WAHSVS DLINW L A+ PS +DIN
Sbjct: 61 NDPNAPMLYKGVYHLFYQYNPKGAVWGN-IVWAHSVSKDLINWEALEPAIYPSKWFDING 119
Query: 128 CWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187
WSGS T +PG P ILYTGI + Q+QN A+P++LSDP LK W+K NP++ P NG
Sbjct: 120 TWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPDNGE 179
Query: 188 KDDMFRDPTTAW-QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGM 246
FRDPTTAW DG WR+LVG + N G+A++Y S DF W K P++S ++TGM
Sbjct: 180 NGSAFRDPTTAWFNKKDGYWRMLVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTGM 239
Query: 247 WECPDIFPVSINGTI-GVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD 305
WECPD FPVS+ G+D S P KHVLK SL +++YY LGTYD + D + PD
Sbjct: 240 WECPDFFPVSVTDKKNGLDFSYDGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDGY 299
Query: 306 FHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365
+ LR+DYG +YASKTFFD NRR+LW WANESD+ QDD KGW+G+Q +PR I
Sbjct: 300 TPDGWDGLRFDYGNYYASKTFFDDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTIL 359
Query: 366 LDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
LD SGKQLV WP+EEIE+LRGK V + ++++ G EV GIT +QV+
Sbjct: 360 LDSSGKQLVFWPIEEIESLRGKNVQMTNQKMEMGQRFEVQGITPAQVD 407
|
|
| TAIR|locus:2049445 cwINV4 "cell wall invertase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 207/408 (50%), Positives = 276/408 (67%)
Query: 11 SPALMVLLCCFLLIANGAHQS----EACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNW 66
S + VLL +LI N ++Q+ +A + ++LQS V + N + S+HF+PP++W
Sbjct: 4 SNVISVLLLLLVLI-NLSNQNIKGIDAFHQIYEELQSESVES-VNHLHRPSFHFQPPKHW 61
Query: 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDIN 126
INDPNGP+YYKG+YHLFYQYN G ++G+ +IWAHSVS DL+NW L AL PS +DI
Sbjct: 62 INDPNGPVYYKGLYHLFYQYNTKGAVWGN-IIWAHSVSKDLVNWEALEPALSPSKWFDIG 120
Query: 127 SCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNG 186
WSGS+TI+PG P ILYTG++ + Q+QN A+PE+ SDP L+ W+K NP+ P
Sbjct: 121 GTWSGSITIVPGKGPIILYTGVNQNETQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYT 180
Query: 187 VKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGM 246
+ FRDPTTAW + DG WR +VG + G+A++Y S DF HW K HP++S Q TGM
Sbjct: 181 MNGSAFRDPTTAWFSKDGHWRTVVGSKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGM 240
Query: 247 WECPDIFPVSING-TIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD 305
WECPD FPVS+ G+D + P KHVLK SL +++YY LG YD + D + PD +
Sbjct: 241 WECPDFFPVSLTDFRNGLDLDYVGPNTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGN 300
Query: 306 FHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365
LR+DYG FYASKTFFD KNRR+LW WANESD+ +DDI KGW+G+Q +PR +
Sbjct: 301 TPDGWEGLRFDYGNFYASKTFFDYKKNRRILWGWANESDTVEDDILKGWAGLQVIPRTVL 360
Query: 366 LDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVN 413
LD S KQLV WPVEEIE+LRG V +++ ++ G +EV GIT +Q +
Sbjct: 361 LDSSKKQLVFWPVEEIESLRGNYVRMNNHDIKMGQRIEVKGITPAQAD 408
|
|
| TAIR|locus:2201966 ATBETAFRUCT4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
Identities = 183/361 (50%), Positives = 242/361 (67%)
Query: 56 TSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSH 115
T++HF+P QNW+NDPNGP++YKG YH FYQYNP ++GD ++W H+VS DLI+W+HL
Sbjct: 122 TAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGD-IVWGHAVSRDLIHWVHLPI 180
Query: 116 ALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF 175
A+ YD N W+GS T LP +LYTG QVQNLA PE+ +DPLL WVKF
Sbjct: 181 AMVADQWYDSNGVWTGSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKF 240
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD 235
GNPV+ PP G+ FRDPTTAW+ +G+WR+ +G +++ G++ VY + DF + KLD
Sbjct: 241 PGNPVLVPPPGILPKDFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYEKLD 300
Query: 236 HPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDP 295
L+ V TGMWEC D +PVS G+DTSV P VKH++K S+ + D+Y +GTY
Sbjct: 301 TLLHRVPNTGMWECVDFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFD 360
Query: 296 QMDIFSPD--TDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKG 353
+ PD T G + LRYDYGKFYASK+F+D K RRVLW+W ESDS D+ KG
Sbjct: 361 SNGTWIPDDPTIDVGMTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDVQKG 420
Query: 354 WSGVQTVPRAIWLD-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQV 412
WS +Q +PR + LD K+GK LVQWPVEEI++LR D E+G GS+V V +A+Q+
Sbjct: 421 WSSLQGIPRTVVLDTKTGKNLVQWPVEEIKSLRLSSKQF-DLEVGPGSVVPVDVGSAAQL 479
Query: 413 N 413
+
Sbjct: 480 D 480
|
|
| TAIR|locus:2026177 AT1G62660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
Identities = 179/361 (49%), Positives = 238/361 (65%)
Query: 56 TSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSH 115
T++HF+P +NW+NDPNGP++YKG YH FYQYNP ++GD ++W H+VS DLI+W++L
Sbjct: 107 TAFHFQPEKNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGD-IVWGHAVSKDLIHWLYLPI 165
Query: 116 ALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF 175
A+ P YD N W+GS T L +LYTG QVQNLA PE+ SDPLL WVKF
Sbjct: 166 AMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKF 225
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD 235
SGNPV+ PP G+ FRDPTTAW+ G+WR+ +G +I+ G++ +Y + DF + K +
Sbjct: 226 SGNPVLVPPPGIGAKDFRDPTTAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEKHE 285
Query: 236 HPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDP 295
L+ V TGMWEC D +PVS G+DTSV P VKHV+K S+ + D+Y +GTYD
Sbjct: 286 TLLHQVPNTGMWECVDFYPVSKTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTYDD 345
Query: 296 QMDIFSPDTDFH--GNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKG 353
+ PD G S LRYDYGK+YASKTF+D K RR+LW W ESDS D+ KG
Sbjct: 346 SNATWVPDNPSIDVGISTGLRYDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQKG 405
Query: 354 WSGVQTVPRAIWLD-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQV 412
WS VQ +PR + LD ++ K LVQWPVEEI++LR D +G G++V V +A+Q+
Sbjct: 406 WSSVQGIPRTVVLDTRTHKNLVQWPVEEIKSLRLSSKKF-DMTIGPGTVVPVDVGSATQL 464
Query: 413 N 413
+
Sbjct: 465 D 465
|
|
| UNIPROTKB|Q9FSV7 1-SST "Sucrose:sucrose 1-fructosyltransferase" [Festuca arundinacea (taxid:4606)] | Back alignment and assigned GO terms |
|---|
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 155/365 (42%), Positives = 231/365 (63%)
Query: 56 TSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSH 115
T +HF+P ++++NDPNGP+YY G YHLFYQYNP G +G+ + WAH+VS D++NW HL
Sbjct: 123 TGFHFQPEKHYMNDPNGPVYYGGWYHLFYQYNPKGDSWGN-IAWAHAVSKDMVNWRHLPL 181
Query: 116 ALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF 175
A+ P YD N +GS+T+LP + +LYTG + QVQ LA P + SDPLL++W+K
Sbjct: 182 AMVPDQWYDSNGVLTGSITVLPDGQVILLYTGNTDTLAQVQCLATPADPSDPLLREWIKH 241
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAW-QAPDGRWRVLVGGQIDN--EGMAFVYWSWDFIHWT 232
NP++ PP G+ FRDP TAW D WR ++G + D+ G+ Y + DF+++
Sbjct: 242 PANPILYPPPGIGLKDFRDPLTAWFDHSDNTWRTVIGSKDDDGHAGIILSYKTKDFVNYE 301
Query: 233 KLDHPLYSVQE-TGMWECPDIFPVSINGT--IGVDTSVLNPGVKHVLKTSLFSDKHDYYV 289
+ ++ + TGM+EC D++PV N + +G D S P V VLK S ++HDYY
Sbjct: 302 LMPGNMHRGPDGTGMYECIDLYPVGGNSSEMLGGDDS---PDVLFVLKESSDDERHDYYA 358
Query: 290 LGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDD 349
LG +D +I++P LRYD+GK+YASK+F+D KNRR++WA+ E+DS Q D
Sbjct: 359 LGRFDAAANIWTPIDQELDLGIGLRYDWGKYYASKSFYDQKKNRRIVWAYIGETDSEQAD 418
Query: 350 IDKGWSGVQTVPRAIWLDKSGK-QLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGIT 408
I KGW+ + T+PR + LDK + L+QWPVEE++TLR + + +GS++ +
Sbjct: 419 ITKGWANLMTIPRTVELDKKTRTNLIQWPVEELDTLRRNSTDLSGITVDAGSVIRLPLHQ 478
Query: 409 ASQVN 413
+Q++
Sbjct: 479 GAQID 483
|
|
| UNIPROTKB|Q4KBP1 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 114/359 (31%), Positives = 185/359 (51%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
Y +YH PP W+NDPNG +Y++G YH+FYQ++P +G M W H+ S DL++W HL
Sbjct: 32 YRLAYHLAPPVGWMNDPNGLVYFRGEYHVFYQHHPYSAQWGP-MHWGHAKSRDLVHWEHL 90
Query: 114 SHALCPSGPYDINSCWSGSVTILPGDKPFILYTG---IDASGQQVQNLAMPENLSDPLLK 170
AL P YD + C+SGS ++ D +++YTG + A G + +++ + L+
Sbjct: 91 PIALAPGEAYDRDGCFSGSAVVMD-DVLYLIYTGHTWLGAPGDE-RSIRQVQCLASST-- 146
Query: 171 DWVKFSGN-PVM--TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD 227
D V FS + PV+ P G+ FRDP W+ + +W + +G + + +Y S D
Sbjct: 147 DGVAFSKHGPVIDRAPEPGIMH--FRDPKV-WRRGE-QWWMALGARQGDAPQLLLYRSGD 202
Query: 228 FIHWTKLDHPLYSVQETG--MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH 285
HWT L L +E+ MWECPD+F + G D + +P L S + + +
Sbjct: 203 LHHWTYLRCALQGQRESDGYMWECPDLFELD-----GCDVFLYSP---QGLNPSGYDNWN 254
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLR-YDYGK-FYASKTFFDSAKNRRVLWAWANES 343
+ +Y +M + D + +LR D+G FYA++T + RR+LWAW +
Sbjct: 255 KFQ--NSY--RMGLLD-DRGYFSEGGELRELDHGHDFYAAQTLL-APDGRRLLWAWMDMW 308
Query: 344 DSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIV 402
DS + W G ++PR L ++G++L P E+ LR Q ++ + SG+ +
Sbjct: 309 DSPMPSQAQHWCGALSLPRE--LSRNGERLRMRPARELAALRQSQRTLAIGVVESGNCI 365
|
|
| UNIPROTKB|Q48BH6 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 98/317 (30%), Positives = 149/317 (47%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
Y YH PP W+NDPNG +Y++G YH+FYQ++P +G M W H+ S DL++W HL
Sbjct: 27 YRPGYHLAPPAGWMNDPNGVVYFRGEYHVFYQHHPFDAKWGP-MYWGHAKSADLVHWQHL 85
Query: 114 SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWV 173
AL P +D + C+SGS + GD ++YTG G+ L + + D +
Sbjct: 86 PIALAPGDDFDQDGCFSGSAVVC-GDTLALIYTGHTWLGEVGDELLIRQVQCLATSLDGI 144
Query: 174 KF--SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHW 231
F G + +PP FRDP WQ D W ++ G ++ + + +Y S D W
Sbjct: 145 NFVKHGAVIDSPPQDTIIH-FRDPKV-WQQDD-HWYLIAGARLGDRPLLPLYRSVDLHAW 201
Query: 232 TKLDHPLYSVQETG-MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290
+ + + G MWECPD+F + G D + +P + H Y +
Sbjct: 202 EFVSYVSSGNEGDGYMWECPDLFRLD-----GRDVLLYSPQGMPAQGYERLNKFHTGYRV 256
Query: 291 GTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDD 349
G D Q F+G + D G FYA++T +A RR++WAW + +S
Sbjct: 257 GQIDSQRQ-------FNGGPF-IELDNGHDFYAAQTLV-AADGRRLVWAWLDMWESPTPT 307
Query: 350 IDKGWSGVQTVPRAIWL 366
W G+ +PR + L
Sbjct: 308 ATHLWRGMLGLPRELEL 324
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q43866 | INV1_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.5653 | 0.9025 | 0.6660 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_VI1536 | hypothetical protein (573 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 431 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 1e-144 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-138 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 6e-91 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 3e-70 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 5e-47 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 2e-38 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 3e-18 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 3e-14 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 418 bits (1076), Expect = e-144
Identities = 158/360 (43%), Positives = 210/360 (58%), Gaps = 23/360 (6%)
Query: 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC 118
HF+PP+ W+NDPNG +YYKG YHLFYQYNP G ++G+ + W H+VS DL++W HL AL
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGN-IHWGHAVSKDLVHWTHLPVALA 59
Query: 119 PSGPYDINSCWSGSVTILPGDKPFILYTGI--DASGQQVQNLAMPENLSDPLLKDWVKFS 176
P YD N +SGS I PG +LYTG + QVQ A SD L W K+
Sbjct: 60 PDEWYDSNGVFSGSAVIDPG-NLSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYD 118
Query: 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG-GQIDNEGMAFVYWSWDFIHWTKLD 235
GNPV+TPP G + FRDP W D +W +++G D G+A +Y S D +WT L
Sbjct: 119 GNPVLTPPPGGGTEHFRDPKVFWYDGD-KWYMVIGASDEDKRGIALLYRSTDLKNWTLLS 177
Query: 236 HPLYSVQE--TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTY 293
L+S+ GMWECPD+FP+ G KHVLK S +YY +G +
Sbjct: 178 EFLHSLLGDTGGMWECPDLFPLPGEGD----------TSKHVLKVSPQGGSGNYYFVGYF 227
Query: 294 DPQMDIFSPDTDFHGNSNDLRYDYG-KFYASKTFFDSAKNRRVLWAWANESDSTQDDI-D 351
D D F+PD LR DYG FYAS+TF+D NRR+L W DS DD+
Sbjct: 228 DGD-DTFTPDDPVDTGH-GLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVPT 285
Query: 352 KGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQ 411
KGW+G ++PR + LD +G +L+QWPVEE+E+LR + + + L +GS+ E+ G+TAS
Sbjct: 286 KGWAGALSLPRELTLDLTGGKLLQWPVEELESLR-NKKELLNLTLKNGSVTELLGLTASG 344
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 398 bits (1024), Expect = e-138
Identities = 146/329 (44%), Positives = 190/329 (57%), Gaps = 34/329 (10%)
Query: 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC 118
HF+PP+ W+NDPNG +YYKG YHLFYQYNP G ++G+ W H+VS DL++W HL AL
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGN-KHWGHAVSKDLVHWEHLPVALA 59
Query: 119 PSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGN 178
P YD N C+SGS +LP D +LYTG QVQ LA + + W K+ GN
Sbjct: 60 PDEWYDSNGCFSGSAVVLP-DNLVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGN 114
Query: 179 PVMT--PPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWDFIHWTKLD 235
PV+ PP K FRDP AW PDG+W +++G Q +++ G A +Y S D +W L
Sbjct: 115 PVIINPPPGYTKH--FRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLG 172
Query: 236 HPLYSV-QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL---FSDKHDYYVLG 291
L+SV GMWECPD+FPV N VKHVLK S + DYY +G
Sbjct: 173 ELLHSVPDGGGMWECPDLFPVDGKD---------NGPVKHVLKFSPQGYQNGYQDYYFIG 223
Query: 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDI 350
T+D D F+P ++ R DYG FYAS+TF+D RR+L W E DS DD+
Sbjct: 224 TFDADGDTFTPP-------DEQRLDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDV 276
Query: 351 --DKGWSGVQTVPRAIWLDKSGKQLVQWP 377
KGW+G ++PR + L G +L+QWP
Sbjct: 277 PTTKGWAGALSIPRELTLKDEGGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 276 bits (709), Expect = 6e-91
Identities = 119/328 (36%), Positives = 161/328 (49%), Gaps = 42/328 (12%)
Query: 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD 124
W+NDPNG +Y+ G YHLFYQYNP GP++G+ W H+ S DL++W HL AL P PYD
Sbjct: 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMH-WGHATSKDLVHWEHLPVALAPDDPYD 59
Query: 125 INSCWSGSVTILPGDKPFILYTGI---DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVM 181
C+SGS + K + YTG D +Q Q LA S + + K+ GNPV+
Sbjct: 60 SGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLA----YSTDDGRTFTKYEGNPVI 115
Query: 182 TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWDFIHWTKLDHPLYS 240
PP+G FRDP W DG+W +++G ++ G +Y S D +W L L S
Sbjct: 116 PPPDGYTTH-FRDPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNWEYLGELLTS 172
Query: 241 VQETG-MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK------HDYYVLGTY 293
+ + G MWECPD+FP+ + G K VL S + Y++G +
Sbjct: 173 LGDFGYMWECPDLFPLDVEG-------------KWVLIFSPQGLEPEGNGSGTGYLVGDF 219
Query: 294 DPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDK 352
D F DYG FYA +TF D RR+L W D +
Sbjct: 220 DGTTFTFDHTE-------FGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPED 271
Query: 353 GWSGVQTVPRAIWLDKSGKQLVQWPVEE 380
GW+G T+PR + L K G +L Q PV E
Sbjct: 272 GWAGCLTLPRELSL-KDGGRLYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 3e-70
Identities = 123/365 (33%), Positives = 172/365 (47%), Gaps = 35/365 (9%)
Query: 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN 109
A PY YHF PP W+NDPNG +Y+ G YHLFYQYNP G G W H+VS DL++
Sbjct: 24 AKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGP-KHWGHAVSKDLVH 82
Query: 110 WIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTG----IDASGQQVQNLAMPENLS 165
W HL AL P YD + C+SGS ++ + YTG + QQ Q +A E+
Sbjct: 83 WEHLPIALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGG 141
Query: 166 DPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYW 224
+ K+SGNP++ P G FRDP W G+W +++G Q ++ G +Y
Sbjct: 142 -----TFEKYSGNPIIDQPEGYTPH-FRDPKVVWD-EGGKWWMMLGAQGEDLKGTILLYE 194
Query: 225 SWDFIHWTKLDHPLYSVQE--TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282
S D +W Q MWECPD+F + + L+
Sbjct: 195 SDDLKNWQFT-GEFGLEQGGLGYMWECPDLFELDGEDVLLFWPQGLSINGGEYDNIY--- 250
Query: 283 DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWAN 341
Y +G +D + G +L D+G FYA +TF D RR+L W
Sbjct: 251 --QSGYFVGDFDGKEFKLD-----DGQFREL--DFGFDFYAPQTFLD-PDGRRILIGWMG 300
Query: 342 ESDSTQD--DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSG 399
D T + ID+GW G T+PR + L +L Q PV E+E+LR + + H+ L
Sbjct: 301 NWDYTNNYPTIDEGWRGAMTLPRELTL--EDGKLYQTPVRELESLRKPEEAAHNTTLSGN 358
Query: 400 SIVEV 404
S +E+
Sbjct: 359 SKLEL 363
|
Length = 486 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 5e-47
Identities = 114/358 (31%), Positives = 167/358 (46%), Gaps = 61/358 (17%)
Query: 53 PYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIH 112
+ ++H +P +NDPNG +Y+KG YHLFYQ+ P GP+ G K W H S DL++W
Sbjct: 12 EWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKS-WGHYTSKDLVHWED 70
Query: 113 LSHALCPSGPYDINSCWSGS-VTILPGDKPFILYTG--IDASGQQ--VQNLA-MPENLSD 166
AL P PYD + C+SGS V + ++YTG D+ + Q LA M ++
Sbjct: 71 EGVALAPDDPYDSHGCYSGSAVDN--NGQLTLMYTGNVRDSDWNRESYQCLATMDDDGH- 127
Query: 167 PLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWS 225
+ G V+ P FRDP W+ +G W +++G Q + E G +Y S
Sbjct: 128 ------FEKFGIVVIELPPAGYTAHFRDPKV-WKH-NGHWYMVIGAQTETEKGSILLYRS 179
Query: 226 WDFIHWTKLDHPLYSVQETG------MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTS 279
D +WT + + + G MWECPD+F S++G + VL S
Sbjct: 180 KDLKNWTFV-GEILGDGQNGLDDRGYMWECPDLF--SLDG-------------QDVLLFS 223
Query: 280 ---LFSDKHDY-------YVLGTYDPQMDIFSPDTDFHGNSNDLRYDYG-KFYASKTFFD 328
L + +DY Y++G D + F+ T+FH DYG FYA +TF
Sbjct: 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTEFH------ELDYGFDFYAPQTFLA 277
Query: 329 SAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRG 386
RR+L AW + GW+ T+PR L +LVQ P+ E++ LR
Sbjct: 278 P-DGRRILVAWMGLPEIDYPTDRDGWAHCMTLPRE--LTLKDGKLVQTPLRELKALRT 332
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 139 bits (353), Expect = 2e-38
Identities = 73/312 (23%), Positives = 105/312 (33%), Gaps = 40/312 (12%)
Query: 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPY 123
DPN + Y G Y++F+ + G AH+ S DL+NW AL GP
Sbjct: 1 ADPN-LIKYNGTYYIFFSGDDKNGNPG----IAHATSKDLVNWTDHPVALVWWARRGGPK 55
Query: 124 DINSCWSGSVTILPGDKPFILYTGID-ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMT 182
D W+ S+ + K ++ YT + QQ +A E+ + P G +
Sbjct: 56 DSGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGP---WTDYIGGPVLPD 112
Query: 183 PPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMAFVYWSWDFIHW--TKLDHPLY 239
P FRDP DG+W ++ G N G F+Y S D W + +
Sbjct: 113 NPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELLIS 171
Query: 240 SVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL------FSDKHDYYVLGTY 293
+ E P + NG K+ L S+ S Y
Sbjct: 172 EGEGGKQIEGPGLLK--KNG-------------KYYLFYSINGTGRVDSTYSIGYARSES 216
Query: 294 DPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKG 353
D + DT + Y + F D A R VL A D G
Sbjct: 217 DTGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFND-AGGRVVLVYHAYNVQYA-DAPTYG 274
Query: 354 WSGVQTVPRAIW 365
W +PR +W
Sbjct: 275 WGRSLAIPRLLW 286
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 3e-18
Identities = 74/300 (24%), Positives = 113/300 (37%), Gaps = 37/300 (12%)
Query: 73 PMYYKGVYHLFYQYNPLGPL-FGDKMIWAHSVSYDLINWIHLSHALCPSGPYDIN-SCWS 130
P Y G +H+FY ++P G + W+ + DL+N+ A+ G D + + +
Sbjct: 5 PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGT 64
Query: 131 GSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDD 190
GSV I YTG + G+ Q + M D L W K ++ G + +
Sbjct: 65 GSV-IKGEGTYHAFYTGHNLDGKPKQVV-MHATSDD--LITWTKDPEFILIADGEGYEKN 120
Query: 191 MFRDPTTAWQAPDGRWRVLVG-----GQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETG 245
+RDP W +G + +L+ G + G ++ S D +W + P Y+
Sbjct: 121 DWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWEY-EEPFYAPGLYF 179
Query: 246 MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD 305
M ECPD+F + L S FS+ Y F P
Sbjct: 180 MPECPDLF--KMGD-------------WWYLVYSEFSEN----RKTHYRVSKSPFGPWRA 220
Query: 306 FHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365
++ D R FYA+KT D RR L+ W DD + W G V I
Sbjct: 221 PDDDTFDGR----AFYAAKTASD--GTRRFLFGWVPTKAGNDDDGNWEWGGNLVVHELIQ 274
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 3e-14
Identities = 74/283 (26%), Positives = 96/283 (33%), Gaps = 41/283 (14%)
Query: 77 KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPS--GPYDINSCWSGSVT 134
G YHLFY P G G+ + S D W L P G +D W+ SV
Sbjct: 13 VGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVV 72
Query: 135 ILPGDKPFILYTGIDASG--QQVQNLAMPENLSDPLLKDWVKFSGNPVM----TPPNGVK 188
P + YTG D Q LA ++ L W K NPV + G
Sbjct: 73 RDPDGTYRMFYTGYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNPGPW 127
Query: 189 DDM-FRDPTTAWQAPDGRWRVLVGGQIDNEGMA-FVYWSWDFIHWTKLDHPLYSVQET-- 244
DD +RDP G WR+ G + +E A + S D IHWT + P
Sbjct: 128 DDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDD 187
Query: 245 GMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDPQMDIFSPD 303
G E P V I+G + L S + D Y +GT +F P
Sbjct: 188 GQLEVP--QVVKIDG-------------RWYLLYSGRNEDAKTGYRVGT-----ALFGPG 227
Query: 304 TDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
D YA++ D VL + DS
Sbjct: 228 RPLTLAELL---DRTDLYAARPVPDGEGGGVVLEGFVQFGDSG 267
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 431 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.95 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.91 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.84 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.84 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.83 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.79 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.74 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.7 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.66 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.65 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.61 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.6 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.53 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.45 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.43 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.43 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.41 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.41 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.33 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 99.33 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 99.29 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.26 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 99.18 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 99.17 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 99.14 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.12 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 99.12 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 99.05 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.97 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.9 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.9 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.89 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.71 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 98.71 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.66 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.64 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.64 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.63 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.61 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.61 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.49 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.45 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 98.34 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.27 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.27 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.25 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 98.11 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 98.06 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 98.05 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 97.97 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 97.95 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 97.89 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.82 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 97.8 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 97.72 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 97.72 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.69 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.65 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 97.63 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.55 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 97.46 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 97.33 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 97.26 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 96.86 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 96.82 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 96.74 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 96.55 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 95.48 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 94.63 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 92.66 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 90.25 | |
| PF13810 | 316 | DUF4185: Domain of unknown function (DUF4185) | 87.42 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 84.64 | |
| PTZ00334 | 780 | trans-sialidase; Provisional | 83.77 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 81.73 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-93 Score=718.00 Aligned_cols=381 Identities=56% Similarity=0.986 Sum_probs=355.2
Q ss_pred ccccccccccCCCCCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccc
Q 014058 37 TNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHA 116 (431)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~a 116 (431)
..+++.+++++...+.++||.|||+|++|||||| +|++|.|||||||||.++.|| +.+||||+|+||+||+.+|+|
T Consensus 32 ~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg-~ivWGHavSkDLinW~~lp~A 107 (571)
T KOG0228|consen 32 NYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWG-NIVWGHAVSKDLINWEALPPA 107 (571)
T ss_pred hhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceee-eeEeeeecchhhccccccCcc
Confidence 3344544444567889999999999999999999 799999999999999999999 899999999999999999999
Q ss_pred cCCCCccCCCCeEeecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC--CCCCCCCccC
Q 014058 117 LCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVKDDMFRD 194 (431)
Q Consensus 117 L~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p--~~~~~~~~RD 194 (431)
|.|++++|.+|||||||+++++|+++++|||.+...+|+|.+|+..|.+|+.|+.|.|.++||++.++ .+++...|||
T Consensus 108 i~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRD 187 (571)
T KOG0228|consen 108 IAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRD 187 (571)
T ss_pred cCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccC
Confidence 99999999999999999999999999999999888899999999999999999999999999999877 6778899999
Q ss_pred CeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeee
Q 014058 195 PTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKH 274 (431)
Q Consensus 195 P~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~ 274 (431)
|+++|.+++|+|+|++|+..+++|.+.+|+|+|+++|+..+.|+++...++||||||||++..+|.++++.+..+...|+
T Consensus 188 PttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkh 267 (571)
T KOG0228|consen 188 PTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKH 267 (571)
T ss_pred CceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEecccccc
Confidence 99999999999999999988888999999999999999998899988899999999999999999999987766555699
Q ss_pred EEEEeeCCCCeeeEEEeeecCCCCeeecCCCCCCCCCceecccCCCcccceeecCCCCeEEEEEeccCCCCCCCCCCCCc
Q 014058 275 VLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGW 354 (431)
Q Consensus 275 vl~~s~~~~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW 354 (431)
|++.|+.+++.++|+||+||+++.+|+|+..+.+.....+.|||+|||+|||.|..++|||+|||++|+++..+..++||
T Consensus 268 vlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw 347 (571)
T KOG0228|consen 268 VLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGW 347 (571)
T ss_pred ccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhccc
Confidence 99999988899999999999988999999887776566789999999999999998999999999999999999999999
Q ss_pred cccccccEEEEEec-CCCeEEecchHHHHhhhccceeccceeeCCCceEEecccccceEEEEEEEEEe
Q 014058 355 SGVQTVPRAIWLDK-SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVNSFHCILLY 421 (431)
Q Consensus 355 ~g~lslPR~L~l~~-~G~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (431)
+|.||+||+++|+. .|++|.|.|++|++.||...+...+..+++|...++.++++.|+|+|++|.+.
T Consensus 348 ~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~ 415 (571)
T KOG0228|consen 348 RGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVE 415 (571)
T ss_pred ccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEec
Confidence 99999999999998 78899999999999999999988888899999999999999999999999987
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-86 Score=679.08 Aligned_cols=319 Identities=39% Similarity=0.734 Sum_probs=277.4
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeE
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~ 129 (431)
..++|||.|||+||.||||||||++|++|+|||||||+|+++.|| ++|||||+|+|||||+++|+||.|+..+|.+|||
T Consensus 24 ~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~y 102 (486)
T COG1621 24 AKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHG-PKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCY 102 (486)
T ss_pred cCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCC-CceeeeeccCCcccceECCceecCCCccccCCce
Confidence 558999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eecEEEccCCeEEEEEeeccC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCe
Q 014058 130 SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~ 205 (431)
|||||++ +|...+||||+.+ .+.+.||+|+|+|+ .+|+|+.+|||+..|+++ +.|||||||+|+ ++++
T Consensus 103 SGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~ 174 (486)
T COG1621 103 SGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGK 174 (486)
T ss_pred eeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCc
Confidence 9999985 9999999999865 37789999999996 588997678999888876 889999998888 6889
Q ss_pred EEEEEeeee-CCcceEEEEEeCCCCCcEEccccccc-CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC-
Q 014058 206 WRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS- 282 (431)
Q Consensus 206 ~~M~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~- 282 (431)
|||++||+. +..|+|+||+|+||++|++.|++..+ +..++||||||||+|+ +...+ .+|++..+.++
T Consensus 175 ~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~--~~~~~--------~~~pqg~~~~~~ 244 (486)
T COG1621 175 WWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELD--GEDVL--------LFWPQGLSINGG 244 (486)
T ss_pred EEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEec--CcCce--------EEcceeeecCCC
Confidence 999999987 56789999999999999999986655 4456799999999999 43333 35565555432
Q ss_pred ----CCeeeEEEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCC--CCCCCCCcc
Q 014058 283 ----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST--QDDIDKGWS 355 (431)
Q Consensus 283 ----~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~--~~~~~~gW~ 355 (431)
...+.|++|+||++ +|.+... .+++||+|+ |||+|||.++ ++|||++|||++|++. .++...+|+
T Consensus 245 ~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~ 316 (486)
T COG1621 245 EYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWR 316 (486)
T ss_pred cCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcC
Confidence 45689999999997 6665542 367999999 9999999985 7999999999999986 566678999
Q ss_pred ccccccEEEEEecCCCeEEecchHHHHhhhccceeccceeeC
Q 014058 356 GVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELG 397 (431)
Q Consensus 356 g~lslPR~L~l~~~G~~L~q~Pv~el~~Lr~~~~~~~~~~l~ 397 (431)
|||||||||+|. +| +|+|+|++||++||+.+..+.+..++
T Consensus 317 ~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~ 356 (486)
T COG1621 317 GAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLS 356 (486)
T ss_pred ccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccc
Confidence 999999999995 66 79999999999999986655555444
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-78 Score=629.45 Aligned_cols=306 Identities=34% Similarity=0.659 Sum_probs=264.1
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeE
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~ 129 (431)
.+++|||+|||+|+.||||||||++|++|+||||||++|.++.|| +++||||+|+||+||+++|+||.|++.+|..|||
T Consensus 9 ~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 9 LQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHG-LKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred ccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccC-ceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 457899999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eecEEEccCCeEEEEEeeccC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCe
Q 014058 130 SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~ 205 (431)
||||++ ++|+++|||||+.. .+.+.|++|+|+|+ .+|+|.+ +|||.+++.....+||||+| |+ .+|+
T Consensus 88 sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~ 158 (445)
T TIGR01322 88 SGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGH 158 (445)
T ss_pred ECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCE
Confidence 999987 59999999999753 24678999999985 5899974 59997644434678999996 44 3689
Q ss_pred EEEEEeeee-CCcceEEEEEeCCCCCcEEcccccccC-----CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEe
Q 014058 206 WRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSV-----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTS 279 (431)
Q Consensus 206 ~~M~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~-----~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s 279 (431)
|||++|++. +..|++++|+|+||++|++.+.+.... ..+.|||||+||+|+ | ||||++|
T Consensus 159 ~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~s 223 (445)
T TIGR01322 159 WYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLFS 223 (445)
T ss_pred EEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEEe
Confidence 999999876 456899999999999999998654332 235699999999997 5 7888887
Q ss_pred eCCC----------CeeeEEEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCC
Q 014058 280 LFSD----------KHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD 348 (431)
Q Consensus 280 ~~~~----------~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~ 348 (431)
.... ..++|++|+||.++.+|+|++. .+.+|+|+ |||+|+|.++ ++|||+||||++|+...+
T Consensus 224 ~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~ 296 (445)
T TIGR01322 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYP 296 (445)
T ss_pred ccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCC
Confidence 6431 2467999999987789988753 46899998 9999999885 699999999999987666
Q ss_pred CCCCCccccccccEEEEEecCCCeEEecchHHHHhhhccce
Q 014058 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV 389 (431)
Q Consensus 349 ~~~~gW~g~lslPR~L~l~~~G~~L~q~Pv~el~~Lr~~~~ 389 (431)
+.+.+|+|+|||||+|+|+ +| +|+|+|++||++||++..
T Consensus 297 ~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~ 335 (445)
T TIGR01322 297 TDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEH 335 (445)
T ss_pred CccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCcc
Confidence 6778999999999999996 67 799999999999998754
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-77 Score=616.67 Aligned_cols=308 Identities=47% Similarity=0.898 Sum_probs=257.4
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccC
Q 014058 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (431)
Q Consensus 59 H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d 138 (431)
||+|+.||||||||++|++|+||||||++|.++.|| +++||||+|+||+||+++++||.|+..+|..|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~ 78 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWG-NIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-P 78 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCC-CeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999885 7
Q ss_pred CeEEEEEeeccCC------CceeE-EEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEe
Q 014058 139 DKPFILYTGIDAS------GQQVQ-NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (431)
Q Consensus 139 g~~~l~YTg~~~~------~~~~q-~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~g 211 (431)
|++++||||+... ..+.| +.|.|+|+ ++|+|+++|||+.++++....+||||+|+|+ ++|+|||++|
T Consensus 79 ~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g 152 (437)
T smart00640 79 GNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLG-----GTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIG 152 (437)
T ss_pred CceEEEEcCCcccccccCcccEEEEEEEECCCC-----CeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEE
Confidence 7799999997421 22334 44444443 7999987799997665556789999998776 3479999999
Q ss_pred eee-CCcceEEEEEeCCCCCcEEccccccc--CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeE
Q 014058 212 GQI-DNEGMAFVYWSWDFIHWTKLDHPLYS--VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYY 288 (431)
Q Consensus 212 a~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~--~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y 288 (431)
++. +..|+|++|+|+||++|++.+.++.. ...+.||||||||+|+.+| .+.||||++|.++...++|
T Consensus 153 ~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y 222 (437)
T smart00640 153 ASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYY 222 (437)
T ss_pred EEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEE
Confidence 876 45799999999999999999865543 2345899999999998543 2359999999987678899
Q ss_pred EEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCC-CCCCCCCCccccccccEEEEE
Q 014058 289 VLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDS-TQDDIDKGWSGVQTVPRAIWL 366 (431)
Q Consensus 289 ~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~-~~~~~~~gW~g~lslPR~L~l 366 (431)
++|.++++ .+|+|+... .....+++|+|+ |||+|+|.+++.+||||||||++++. ....+..+|+|+|||||+|+|
T Consensus 223 ~~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l 300 (437)
T smart00640 223 FVGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTL 300 (437)
T ss_pred EEEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEE
Confidence 99999973 479887642 112345899998 99999999875569999999999973 222333899999999999999
Q ss_pred e-cCCCeEEecchHHHHhhhcc
Q 014058 367 D-KSGKQLVQWPVEEIETLRGK 387 (431)
Q Consensus 367 ~-~~G~~L~q~Pv~el~~Lr~~ 387 (431)
+ ++| +|+|+|++||++||..
T Consensus 301 ~~~~g-~L~~~Pv~el~~lr~~ 321 (437)
T smart00640 301 DKTGG-KLLQWPVEELESLRNV 321 (437)
T ss_pred EecCC-EEEEeecHHHHhhhCc
Confidence 5 566 7999999999999954
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-78 Score=598.37 Aligned_cols=299 Identities=43% Similarity=0.855 Sum_probs=248.0
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccC
Q 014058 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (431)
Q Consensus 59 H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d 138 (431)
||+|+.||||||||++|++|+||||||++|+++.|| +++||||+|+|||||+++++||.|++.+|++|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~ 78 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWG-NMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-D 78 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS--SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-T
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccc-eeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999986 6
Q ss_pred CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeec-CCcEEcC-CCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC
Q 014058 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFS-GNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (431)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~-~~Pvi~~-p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~ 216 (431)
+++++||||+.....+.|++|+|+|.+ ++|+|++ +||||.. |++ ...+||||+|+|++ +++|+|++|++.+.
T Consensus 79 ~~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~~-~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 79 DNLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWRE-DGRWYMLLGAGRDG 152 (308)
T ss_dssp TCEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEEC-TTEEEEEEEEEETT
T ss_pred CEEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEec-CCEEEEEEeccccC
Confidence 689999999987568999999997654 7999987 4999974 444 78899999988885 69999999999888
Q ss_pred cceEEEEEeCCCCCcEEcccccccCC-CCCceeeCcEEEeccCCccceecccCCCCeeeEEEEee----CCCCeeeEEEe
Q 014058 217 EGMAFVYWSWDFIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL----FSDKHDYYVLG 291 (431)
Q Consensus 217 ~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~----~~~~~~~Y~vG 291 (431)
.|++++|+|+||++|++.+.+..... .+.||||||||+|+..+. + ....+|||++|. .....+.|++|
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-~------~~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-G------TGKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-S------SEEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-c------cceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999987554432 478999999999995421 0 012367899998 34678999999
Q ss_pred eecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCC-CCCCCccccccccEEEEEecC
Q 014058 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD-DIDKGWSGVQTVPRAIWLDKS 369 (431)
Q Consensus 292 ~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~-~~~~gW~g~lslPR~L~l~~~ 369 (431)
+||.++++|+++.. ..+++|+|+ |||+|+|.++.++|||+||||++++.... ..+.+|+|+|||||+|+|+++
T Consensus 226 ~~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~ 300 (308)
T PF00251_consen 226 DFDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDE 300 (308)
T ss_dssp EEETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETT
T ss_pred EecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEEC
Confidence 99777789987721 368999999 99999999975559999999999987422 236899999999999999754
Q ss_pred CCeEEecc
Q 014058 370 GKQLVQWP 377 (431)
Q Consensus 370 G~~L~q~P 377 (431)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 44799998
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-69 Score=531.49 Aligned_cols=286 Identities=40% Similarity=0.770 Sum_probs=245.5
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
||||||||++|++|+||||||++|.++.|+ +++||||+|+||+||+++++||.|+..+|..|||||||+++.+|+++||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~-~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~ 79 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWG-NMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLF 79 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCC-CcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEE
Confidence 899999999999999999999999999999 9999999999999999999999998888899999999998644999999
Q ss_pred EeeccC---CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-CcceE
Q 014058 145 YTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMA 220 (431)
Q Consensus 145 YTg~~~---~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-~~G~i 220 (431)
|||+.. ...+.|++|+|+|. +++|+|...+|++.+ +.....+||||+|++. +|+|+|+++++.+ ..|+|
T Consensus 80 YTg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i 152 (298)
T cd08996 80 YTGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRI 152 (298)
T ss_pred EeceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEE
Confidence 999864 46789999999853 279999988888863 2345679999997655 4999999999863 56899
Q ss_pred EEEEeCCCCCcEEccccc-ccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCC------CeeeEEEeee
Q 014058 221 FVYWSWDFIHWTKLDHPL-YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD------KHDYYVLGTY 293 (431)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~l-~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~------~~~~Y~vG~~ 293 (431)
.+|+|+||++|++.+.+. .....+.|||||+||+++++ .||||++|.+.. ..+.|++|++
T Consensus 153 ~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~~ 219 (298)
T cd08996 153 LLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGDF 219 (298)
T ss_pred EEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEEE
Confidence 999999999999987542 33345679999999999842 299999998642 4579999999
Q ss_pred cCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCCCe
Q 014058 294 DPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ 372 (431)
Q Consensus 294 d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~l~~~G~~ 372 (431)
++. .|+++. ...+++|+|+ |||+|+|.++ ++|||+||||++++...+..+.+|+|+|||||+|+|++++ +
T Consensus 220 ~~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~-~ 290 (298)
T cd08996 220 DGT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG-R 290 (298)
T ss_pred ECC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-E
Confidence 986 555541 1257899998 9999999986 7999999999999987778899999999999999998765 7
Q ss_pred EEecchHH
Q 014058 373 LVQWPVEE 380 (431)
Q Consensus 373 L~q~Pv~e 380 (431)
|.|+|++|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999976
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-56 Score=438.34 Aligned_cols=266 Identities=26% Similarity=0.444 Sum_probs=221.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCC--CCcceEEEEEeCCCccceecccccCCC-CccCCCCeEeecEEEccCCeEEEE
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~w--g~~~~WgHa~S~Dlv~W~~~~~aL~P~-~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
.||. ++|++|+||||||++|.+..| + .++||||+|+||+||+++++||.|. ..+|..|||||||++. +|+++||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~-~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~~-~g~~~l~ 77 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGL-RHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIKG-EGTYHAF 77 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccC-CceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEee-CCEEEEE
Confidence 4888 899999999999999999888 7 8999999999999999999999884 5667899999999874 8999999
Q ss_pred EeeccC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-----CCc
Q 014058 145 YTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNE 217 (431)
Q Consensus 145 YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-----~~~ 217 (431)
|||+.. ...+.|++|+|+|+ ++|+|.+.+||+..+.++...+||||+|++.+.+|+|+|+++++. +..
T Consensus 78 YTg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~ 152 (280)
T cd08995 78 YTGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRR 152 (280)
T ss_pred EEEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCC
Confidence 999764 25678999999885 799998778888755555567899999766645799999999875 356
Q ss_pred ceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC-CCeeeEEEeeecCC
Q 014058 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDPQ 296 (431)
Q Consensus 218 G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d~~ 296 (431)
|+|.+|+|+||++|++.+. +.....+.|||||++|+++ | +|+|++|.+. .....|++|+..
T Consensus 153 g~i~~~~S~Dl~~W~~~~~-~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~-- 214 (280)
T cd08995 153 GCIALFTSKDLKNWEYEEP-FYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP-- 214 (280)
T ss_pred eEEEEEEeCCcCcceecCc-eecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--
Confidence 8999999999999999864 4444456799999999997 5 8999998753 356789999632
Q ss_pred CCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCC
Q 014058 297 MDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSG 370 (431)
Q Consensus 297 ~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~l~~~G 370 (431)
.+.|.... ...|| |+ |||+|+|.++ +||||||||++++...++.+.+|+|||| ||+|.+.+||
T Consensus 215 ~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g 278 (280)
T cd08995 215 FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDG 278 (280)
T ss_pred CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCC
Confidence 23554332 23589 98 9999999985 8999999999998877777899999999 6888888888
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=316.87 Aligned_cols=243 Identities=28% Similarity=0.388 Sum_probs=192.5
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceeccccc--CCCCccCCCCeEeecEEEccCCeEEEEEe
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSGPYDINSCWSGSVTILPGDKPFILYT 146 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL--~P~~~~D~~gv~SGsav~~~dg~~~l~YT 146 (431)
||+.+. |+||||||++|.+..|+....|+||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 555443 8899999999998776535678999999999999999887 55667888999999999864499999999
Q ss_pred eccC--CCceeEEEEEecCCCCCccceeeeecCCcEE-----cCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-CCcc
Q 014058 147 GIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-----TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEG 218 (431)
Q Consensus 147 g~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi-----~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-~~~G 218 (431)
+... ...+.+++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9863 46788999999986 799998766653 222333457899999766533399999999875 3467
Q ss_pred eEEEEEeCCCCCcEEcccc--cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC-CCeeeEEEeeecC
Q 014058 219 MAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDP 295 (431)
Q Consensus 219 ~i~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d~ 295 (431)
+|.+|+|+|+++|++.+.+ ........++|||++|+++ | +|+|+++... ...+.|++|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEeccc
Confidence 8999999999999998753 2223345799999999997 5 8999988764 4568899999876
Q ss_pred CCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCC
Q 014058 296 QMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANES 343 (431)
Q Consensus 296 ~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~ 343 (431)
. .|+|.. ...+|.|. |||+|++.+..++|++++|||.++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455542 35789998 999999987546899999999987
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=294.86 Aligned_cols=269 Identities=28% Similarity=0.445 Sum_probs=204.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccC----CCCccCCCCeEeecEEEccCCeEEE
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~----P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
|||+ +++++|+||||||++|.+ + ..+|+|++|+||+||++++.++. |....+..++|+|+++...+|+++|
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~-~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l 75 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---G-NPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYL 75 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---C-CceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEE
Confidence 7999 999999999999999865 4 78999999999999999998874 6667778899999999864499999
Q ss_pred EEeeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcC-CCCCCCCCccCCeEEEecCCCeEEEEEeeee-CCcceE
Q 014058 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEGMA 220 (431)
Q Consensus 144 ~YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~-p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-~~~G~i 220 (431)
+||+... ...+.+++|+|+|+. ..|++...+||+.. +.......+|||+|+ .+++|+|||++++.. +..+.|
T Consensus 76 ~yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 76 YYTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEE-EcCCCCEEEEEccccCCCCCeE
Confidence 9999753 356889999998874 35666544566532 222345689999965 445699999998764 235678
Q ss_pred EEEEeCCCCCcEEcccc--cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC------CCeeeEEEee
Q 014058 221 FVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS------DKHDYYVLGT 292 (431)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~------~~~~~Y~vG~ 292 (431)
.+++|+|+.+|+..+.. ........++|||++|+++ | +|+|++|... .....|++++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999876543 1223356799999999997 5 8888888754 3456677776
Q ss_pred ecCCCCeeecCCCCC-CCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEE
Q 014058 293 YDPQMDIFSPDTDFH-GNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365 (431)
Q Consensus 293 ~d~~~~~f~p~~~~~-~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~ 365 (431)
.+. +.|.+..... ........|.+. +||++.|.+. ++|+++++|+.++..... ...+|+++|+|||+|+
T Consensus 216 ~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 216 SDT--GPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CCC--CCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 543 4665443110 001123467777 9999999986 799999999999875433 5679999999999873
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.9e-26 Score=226.84 Aligned_cols=194 Identities=22% Similarity=0.233 Sum_probs=136.7
Q ss_pred cCCCcceE-ECCEEEEEEEECCCC----CCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 68 NDPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 68 NDPnG~i~-~~G~YHlFyq~~P~~----~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
-|..|-+. ++|..-+|++..|.. +.|+ .+||||++|+||++|++.+. |.|+..+|..|||||||++..||+++
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~-~~~wgh~~S~dlv~W~~~~~-l~p~~~~d~~g~wSGsa~~~~dg~~~ 85 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHG-DARIGYFYSRAGGNWIDGGK-VFPDGLSPGSREWSGSATLDDDGTVQ 85 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcC-ceEEEEEEeCCCCcccCCCc-cCCCCcccCCCeEcceEEEeCCCeEE
Confidence 35556444 677644898887764 4577 99999999999999999554 66888899999999999986679999
Q ss_pred EEEeeccC----CCceeEEEEEecCCCC-CccceeeeecCCcEEcCC--------------CCCCCCCccCCeEEEecCC
Q 014058 143 ILYTGIDA----SGQQVQNLAMPENLSD-PLLKDWVKFSGNPVMTPP--------------NGVKDDMFRDPTTAWQAPD 203 (431)
Q Consensus 143 l~YTg~~~----~~~~~q~lA~S~D~~d-~~l~~w~k~~~~Pvi~~p--------------~~~~~~~~RDP~Vv~~~~~ 203 (431)
|||||+.+ .+...|++|.+++... .-+..|++. .+++.++ +.....+||||+|+..+++
T Consensus 86 lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~--~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 86 LFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDH--HELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEEeccccCCCCCCCceEEEEEEECCCcceEecccCcc--ceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 99999853 2456778877654310 001233222 2344321 1123568999997555447
Q ss_pred CeEEEEEeeeeC-C---------------------------cceEEEE--EeCCCCCcEEcccccccCCCCCceeeCcEE
Q 014058 204 GRWRVLVGGQID-N---------------------------EGMAFVY--WSWDFIHWTKLDHPLYSVQETGMWECPDIF 253 (431)
Q Consensus 204 g~~~M~~ga~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf 253 (431)
|+|||+++++.. . .|+|.++ +|+|+.+|++.++++....-..+||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 999999998752 2 3566665 677999999987544322234579999999
Q ss_pred EeccCCccceecccCCCCeeeEEEEee
Q 014058 254 PVSINGTIGVDTSVLNPGVKHVLKTSL 280 (431)
Q Consensus 254 ~l~~~g~~~~~~~~~~~~~k~vl~~s~ 280 (431)
+++ | ||+|++|.
T Consensus 244 ~~~--g-------------k~yL~~s~ 255 (349)
T cd08997 244 FHN--G-------------KYYLFTIS 255 (349)
T ss_pred EEC--C-------------EEEEEEeC
Confidence 998 6 88888774
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-23 Score=203.97 Aligned_cols=190 Identities=21% Similarity=0.332 Sum_probs=141.3
Q ss_pred eeeecCCCCccCCCcceEE-CCEEEEEEEECCCCCC---CCCcceEEEEEeCCCc-cceecccccCCC--CccCCCCeEe
Q 014058 58 YHFRPPQNWINDPNGPMYY-KGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLI-NWIHLSHALCPS--GPYDINSCWS 130 (431)
Q Consensus 58 ~H~~p~~gw~NDPnG~i~~-~G~YHlFyq~~P~~~~---wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~--~~~D~~gv~S 130 (431)
-+|..+..++.+|. +++. +|+||||||..|.+.. |-....|+||+|+|+. +|+..+++|.|+ ..+|..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46788888999999 6775 4799999999887643 2113569999999987 899999999887 4678899999
Q ss_pred ecEEEccCCeEEEEEeeccC-------CCceeEEEEEecCCCCCccceeeeecCCcEEcC-C-----------------C
Q 014058 131 GSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-P-----------------N 185 (431)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~-p-----------------~ 185 (431)
++++.. +|+++|+||+... ...+.+++|+|.+.. .+|++. .+||+.+ + .
T Consensus 83 P~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 999874 8999999998753 235677888887642 366664 3454421 0 0
Q ss_pred C-------------------------------------------CCCCCccCCeEEEecCCCeEEEEEeeeeC----Ccc
Q 014058 186 G-------------------------------------------VKDDMFRDPTTAWQAPDGRWRVLVGGQID----NEG 218 (431)
Q Consensus 186 ~-------------------------------------------~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~----~~G 218 (431)
+ ....++|||+| |+ .+|+|||+++++.+ ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 0 01245799995 56 36999999998763 467
Q ss_pred eEEEEEeCCCCCcEEcccccc------cC---CCCCceeeCcEE-Eec
Q 014058 219 MAFVYWSWDFIHWTKLDHPLY------SV---QETGMWECPDIF-PVS 256 (431)
Q Consensus 219 ~i~ly~S~Dl~~W~~~~~~l~------~~---~~~~~wECPdlf-~l~ 256 (431)
++.+|+|+|+++|++.+.+.. .. ....+||||++| +.+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 899999999999999875531 11 136799999999 776
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=179.50 Aligned_cols=162 Identities=21% Similarity=0.298 Sum_probs=123.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCC--CCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGP--LFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~--~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
+.+|. +++++|+||||||++|... .++ .++|+||+|+||++|++.++++. +..++.+++++.+.+|+++|+
T Consensus 79 ~WAP~-v~~~~G~y~myys~~~~~~~~~~~-~~~i~~a~S~Dl~~w~~~~~~~~-----~~~~~iD~~vf~~~dg~~yl~ 151 (294)
T cd08984 79 FWAPE-VVWHGGVYHMYVTYIPGVPPDWGG-PRRIVHYTSPNLWDWTFVGRVDL-----DSDRVIDACVFKLPDGRWRMW 151 (294)
T ss_pred eeCce-EEEECCEEEEEEEecCCCCcccCC-CcEEEEEECCCcCcceECCcccc-----CCCCcEEeEEEEeCCCEEEEE
Confidence 45788 7899999999999998653 234 78999999999999999887632 235789999988767999999
Q ss_pred EeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEE
Q 014058 145 YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224 (431)
Q Consensus 145 YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~ 224 (431)
||+.. ..+.+++|.|+|+ .+|++. .+++.. ...++|+|+ + .+|+|||+++. ..| +.+|+
T Consensus 152 y~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v~-k-~~g~yym~~~~---~~g-~~~~~ 210 (294)
T cd08984 152 YKDER--RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNVF-R-WKGYYWMIIDE---WKG-LGVYR 210 (294)
T ss_pred EECCC--CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCee-E-ECCEEEEEEcC---Cce-EEEEE
Confidence 99753 3456688999885 799984 355541 134899964 4 37899999854 234 67999
Q ss_pred eCCCCCcEEcccccccC----CCCCceeeCcEEEec
Q 014058 225 SWDFIHWTKLDHPLYSV----QETGMWECPDIFPVS 256 (431)
Q Consensus 225 S~Dl~~W~~~~~~l~~~----~~~~~wECPdlf~l~ 256 (431)
|+|+.+|++.+.++... ....+.+||++|+.+
T Consensus 211 S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 211 SKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred CCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 99999999988766532 123467999999876
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=177.64 Aligned_cols=191 Identities=19% Similarity=0.241 Sum_probs=138.4
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCC-CccCCCCeEeecEEEccCCeEE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~-~~~D~~gv~SGsav~~~dg~~~ 142 (431)
.||++||+ +++++|+||||++..+.+ +. ...|.+++|+||+||++++.+|.+. ..++..++|+++++. .+|+++
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~--~~-~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy 79 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAG--GE-QTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYY 79 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCC--CC-eeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEE
Confidence 46899999 578899999999876432 22 4679999999999999999998765 345667999999987 489999
Q ss_pred EEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
|+||+. +.+++|+|+|.. ..|++..++|++.... .....+||.| |.+++|++||++++. +.+.+
T Consensus 80 ~yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~----~~~~i 143 (275)
T cd09004 80 FYFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDV-FIDDDGQAYLYWGGW----GHCNV 143 (275)
T ss_pred EEEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCe-EECCCCCEEEEEcCc----CCEEE
Confidence 999975 457899998864 4677644678875432 2357899996 454689999999863 22233
Q ss_pred -EEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEe
Q 014058 223 -YWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (431)
Q Consensus 223 -y~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (431)
--|+|+.+|+.....+ ......+.|||.+|+.+ | +++|++|........|.++
T Consensus 144 ~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 144 AKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 3478998886543222 11234589999999987 6 7888888754332344444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=175.75 Aligned_cols=147 Identities=16% Similarity=0.259 Sum_probs=113.9
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecc-cccCC--CCccCCCCeEeecEEEccCCeEEEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCP--SGPYDINSCWSGSVTILPGDKPFILY 145 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~-~aL~P--~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (431)
||. +++++|+||||||.++.. + .++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+|
T Consensus 2 nP~-v~~~~G~y~l~y~~~~~~---~-~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Y 75 (268)
T cd08993 2 NPA-VVYDNGEFYLLYRAAGND---G-VIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITY 75 (268)
T ss_pred cCe-EEEECCEEEEEEEEECCC---C-ceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEE
Confidence 564 889999999999987643 4 6899999999999999975 44666 5567788999999886 599999999
Q ss_pred eeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEe-cCCCeEEEEEeeee---CCcceE
Q 014058 146 TGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ-APDGRWRVLVGGQI---DNEGMA 220 (431)
Q Consensus 146 Tg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~-~~~g~~~M~~ga~~---~~~G~i 220 (431)
|+... ...+++++|.|+|+ .+|+|.. .+ +. + ..||+.+ |. ..+|+|+|++.... +..+.|
T Consensus 76 ta~~~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-~------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I 140 (268)
T cd08993 76 AARPNAPNGTRIGLATTKDF-----ITFERLG-TS-LV-P------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDM 140 (268)
T ss_pred EccCCCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-C------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCcE
Confidence 99762 35678999999986 7999973 21 11 1 2378874 43 24899999996442 246789
Q ss_pred EEEEeCCCCCcEEccc
Q 014058 221 FVYWSWDFIHWTKLDH 236 (431)
Q Consensus 221 ~ly~S~Dl~~W~~~~~ 236 (431)
.+++|+||.+|+..+.
T Consensus 141 ~lA~S~Dl~~W~~~~~ 156 (268)
T cd08993 141 WLSFSPDLVHWGNHRF 156 (268)
T ss_pred EEEECCCcCccCCCeE
Confidence 9999999999987653
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=164.31 Aligned_cols=196 Identities=20% Similarity=0.212 Sum_probs=135.7
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc-cCCCCeEeecEEEccCCeEEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-YDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~-~D~~gv~SGsav~~~dg~~~l 143 (431)
+.+-||. +++++|+|+||+.... ..+|.+++|+||+||+.++.+|.+... .+..++|.+.++. .+|+++|
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~-------~~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~ 76 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGN-------GPNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVL 76 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCC-------CCcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEE
Confidence 4567998 7888999999997542 256999999999999999988877654 4456788888776 4899999
Q ss_pred EEeeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcc---e
Q 014058 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG---M 219 (431)
Q Consensus 144 ~YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G---~ 219 (431)
+|++... ...+.+++|+|+|.. ..|++... +++..+. .....+||.|+ .+++|++||+++......+ .
T Consensus 77 ~y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~-~~~~~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~ 148 (287)
T cd08999 77 YYSARDKGSGGQCIGVATADSPL----GPFTDHGK-PPLCCPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTP 148 (287)
T ss_pred EEEeecCCCCCEEEEEEECCCCC----CCCccCCc-ceEecCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCce
Confidence 9999764 245677889988753 36887543 3433222 23567999964 5468999999987542211 2
Q ss_pred EEEE-EeCCCCCcEEcccccccC---CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCe--eeEEEee
Q 014058 220 AFVY-WSWDFIHWTKLDHPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH--DYYVLGT 292 (431)
Q Consensus 220 i~ly-~S~Dl~~W~~~~~~l~~~---~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~--~~Y~vG~ 292 (431)
+.+. .|+|+.+|......+... ....++|||.+|+.+ | +|+|++|...... ..|.+|-
T Consensus 149 i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~~~~~~~~y~i~~ 212 (287)
T cd08999 149 IYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGGCCSGASTYAVGV 212 (287)
T ss_pred EEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCCccCCCCCEEEEE
Confidence 3333 378998886433222111 234589999999996 6 8888888643222 2466653
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=155.62 Aligned_cols=195 Identities=18% Similarity=0.252 Sum_probs=137.6
Q ss_pred CCCcceEECCEEEEEEEECCCCCC---CCCcceEEEEEeCCCccceecccccCCCC-c-cCCCCeEeecEEEccCCeEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLINWIHLSHALCPSG-P-YDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~---wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~-~-~D~~gv~SGsav~~~dg~~~l 143 (431)
||. +++++|+|+||.......+. +. ...|..++|+||+||+.++.+|.+.. . ++..++|.++++. .+|+++|
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~-~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~ 78 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFC-MNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYL 78 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccc-cceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEE
Confidence 888 77889999999987644331 22 34599999999999999999887553 2 5678999999886 5999999
Q ss_pred EEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEE
Q 014058 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (431)
Q Consensus 144 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly 223 (431)
+||+......+.+++|+|+|.. ..|++....|++.... ......||.| |.+++|++||+++.. .+....-
T Consensus 79 yy~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~v-f~d~dG~~yl~~~~~---~~~~~~~ 148 (274)
T cd08990 79 YFPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAV-FIDDDGQAYLYWGGG---LGLRVAK 148 (274)
T ss_pred EEEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcE-EECCCCCEEEEECCc---CCEEEEE
Confidence 9998653345678899998763 4688764445553211 2346789996 455689999999874 2333344
Q ss_pred EeCCCCCcEEccccccc-----CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEe
Q 014058 224 WSWDFIHWTKLDHPLYS-----VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (431)
Q Consensus 224 ~S~Dl~~W~~~~~~l~~-----~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (431)
.|+|+.+|+.....+.. ....+..|+|.+|+.+ | +++|++|........|.+.
T Consensus 149 l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 149 LKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred eCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 57899999754433321 1234568999999987 6 8888888754344455543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-15 Score=147.33 Aligned_cols=191 Identities=21% Similarity=0.227 Sum_probs=130.8
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccC----CCCccCCCCeEeecEEEccCCeEEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~----P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
||. +++++|+|+||+..... . ...+..++|+||++|+..+.+|. +....+..++|+++++.. +|+++|+
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~-~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~ 74 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----A-GPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIYY-EGKYYLY 74 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----C-CCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEEE-CCEEEEE
Confidence 888 78899999999987542 2 35689999999999999998875 344455678999999874 8999999
Q ss_pred EeeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC--CcceEE
Q 014058 145 YTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMAF 221 (431)
Q Consensus 145 YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--~~G~i~ 221 (431)
||+... ...+.+++|+|+|. ..|.+... ...+. ......+||.|+ .+++|++||+++.... ..+.|.
T Consensus 75 y~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~~-~~~~~~iDp~vf-~d~dg~~yl~~~~~~~~~~~~~i~ 144 (271)
T cd08978 75 YSVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPPT-SNNGNSIDPTVF-KDDDGKYYLYYGSGDPGAGFGGIY 144 (271)
T ss_pred EEcccCCCCcccEEEEECCCC-----CCCccccc---cCcCc-cCCCCccCcceE-EcCCCCEEEEEecccCCCCCCcEE
Confidence 998643 24567889999886 35544321 11111 123467899965 4467999999987642 245678
Q ss_pred EEEeCCCCCcEEccccc---ccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEee
Q 014058 222 VYWSWDFIHWTKLDHPL---YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (431)
Q Consensus 222 ly~S~Dl~~W~~~~~~l---~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 292 (431)
++++++...|.. +.+. .......+.|+|.+|+.+ | +|+|++|........|.++-
T Consensus 145 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~~ 202 (271)
T cd08978 145 ISELTDDLTKPT-GPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIGY 202 (271)
T ss_pred EEEECccccccc-CCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEEE
Confidence 888876544432 1221 112234589999999987 5 88888887533233455553
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.66 E-value=7e-15 Score=145.01 Aligned_cols=180 Identities=16% Similarity=0.137 Sum_probs=125.5
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC-ccCCCCeEeecEEEccCCeEEEEEee
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDKPFILYTG 147 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg 147 (431)
||. +++++|+|+||+..... ...+..++|+||++|+.++.++.+.. .++..++|.++++. .+|+++|+||+
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~------~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~ 73 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD------GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSA 73 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC------CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEe
Confidence 888 78899999999875432 23588999999999999998887654 36677999999877 48999999998
Q ss_pred ccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC---cceEEEE
Q 014058 148 IDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN---EGMAFVY 223 (431)
Q Consensus 148 ~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~---~G~i~ly 223 (431)
.... ..+.+++|+|+|.. ..|++... +.+.. .....||.++ .+++|+|||+++..... .+....-
T Consensus 74 ~~~~~~~~~i~~a~s~~p~----gp~~~~~~-~~~~~-----~~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~~ 142 (294)
T cd08991 74 NDRDEKTEHIGVAVSDSPL----GPFRDIKK-PPIDF-----EPKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGTE 142 (294)
T ss_pred ccCCCCcceEEEEEeCCCC----CCCCcCCC-CcccC-----CCcccCCceE-ECCCCCEEEEEEecCCCCcccceEEEE
Confidence 7543 55778899998763 36776432 22221 1346799965 44679999999865422 2344444
Q ss_pred EeCCCCCcEEccc----cccc--------------CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC
Q 014058 224 WSWDFIHWTKLDH----PLYS--------------VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (431)
Q Consensus 224 ~S~Dl~~W~~~~~----~l~~--------------~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 282 (431)
-|.|+.+|..... ++.. .....+.|+|.+++.+ | +|+|++|...
T Consensus 143 l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 143 LVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred EccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 5788877752111 1111 0123479999999997 5 7888887643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.2e-15 Score=147.50 Aligned_cols=177 Identities=18% Similarity=0.259 Sum_probs=127.1
Q ss_pred cccceeeecCCCCc-cCCCcceEECCEEEEEEEECCC-----------CC--CCCCcceEEEEEeCCCccceecccccCC
Q 014058 54 YLTSYHFRPPQNWI-NDPNGPMYYKGVYHLFYQYNPL-----------GP--LFGDKMIWAHSVSYDLINWIHLSHALCP 119 (431)
Q Consensus 54 ~Rp~~H~~p~~gw~-NDPnG~i~~~G~YHlFyq~~P~-----------~~--~wg~~~~WgHa~S~Dlv~W~~~~~aL~P 119 (431)
..|..=+.+..+.. .||..+++.+|+|||||++... .+ .|. ...++||+|+||++|++.+++|.+
T Consensus 23 ~~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~-~y~I~~A~S~Dgv~W~~~g~~L~~ 101 (349)
T cd08992 23 IYPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWD-KCEIWHATSKDGWTWKEEGPAIGR 101 (349)
T ss_pred cCcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCC-ceEEEEEECCCCCCceECCccccC
Confidence 34455555555544 6998799999999999997532 11 245 678999999999999999988865
Q ss_pred C--CccCCCCeEeecEEEccCCeEEEEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCC---------
Q 014058 120 S--GPYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--------- 184 (431)
Q Consensus 120 ~--~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p--------- 184 (431)
. ..+|..++|.+.++. .+|+++|+|++.... ..+.+++|+|+++. ..|++. .+||+.+.
T Consensus 102 ~~~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~ 175 (349)
T cd08992 102 GEKGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDE 175 (349)
T ss_pred CCCCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeecc
Confidence 4 357889999999876 599999999975421 23577899998763 359886 57888542
Q ss_pred ---------CCCCCCCccCCeEEEecCCCeEEEEEeeeeC--------CcceEEEEEeCCCC-CcEEcc-cccc
Q 014058 185 ---------NGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--------NEGMAFVYWSWDFI-HWTKLD-HPLY 239 (431)
Q Consensus 185 ---------~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--------~~G~i~ly~S~Dl~-~W~~~~-~~l~ 239 (431)
..++...+.||.|+.. +|+|||++.+... ..-++.+..|++.. -|+... .|+.
T Consensus 176 ~~~~~~~~~g~wD~~~v~~P~v~~~--~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~~~nPi~ 247 (349)
T cd08992 176 DNRFLVKKKGSFDSHKVHDPCLFPF--NGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKSPYNPIT 247 (349)
T ss_pred CceeEeccCCCcccCceECCEEEEE--CCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeCCCCccc
Confidence 1245667899996544 7999999966431 12357888998875 577643 3443
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.1e-14 Score=140.00 Aligned_cols=170 Identities=23% Similarity=0.272 Sum_probs=119.5
Q ss_pred ccCCCcceEE--CCEEEEEEEE-C---CCC-CCCCCcceEEEEEeCC-CccceecccccCCCCccCCCCeEeecEEEccC
Q 014058 67 INDPNGPMYY--KGVYHLFYQY-N---PLG-PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (431)
Q Consensus 67 ~NDPnG~i~~--~G~YHlFyq~-~---P~~-~~wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d 138 (431)
.-||. +++. +|+|||||.. . |.. ..|.....+++|+|+| |+||++++.++.++..++...+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 57999 7887 7899999942 1 111 2344246799999999 99999998776664444556789999876 49
Q ss_pred CeEEEEEeeccC-----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 139 DKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 139 g~~~l~YTg~~~-----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
|+++||||.... .....+++|+|+|. .+|++.+ ++... .....||.|+ ...+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 13456788999884 6898753 33211 1345799964 54579999999653
Q ss_pred eCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 214 IDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 214 ~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
.. ...+.+..|+|+.+|+..+..+. ...-|.|.+|+.+
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i~----~~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVLG----DRPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCcccc----CCCCCCCCeeEEC
Confidence 22 22456788999999997653332 1234999999986
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.60 E-value=7.1e-14 Score=137.71 Aligned_cols=190 Identities=21% Similarity=0.206 Sum_probs=126.2
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc-------cCCCCeEeecEEEccCC
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILPGD 139 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~-------~D~~gv~SGsav~~~dg 139 (431)
+.||. +++++|+|+||+... ++++++|+||+||++.+.++.+... .+..++|.+.++. .+|
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~----------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 68 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN----------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNG 68 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC----------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECC
Confidence 36998 789999999998753 4899999999999999988865432 2456799999876 499
Q ss_pred eEEEEEeeccCC-CceeEEEEEecCC-CCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCc
Q 014058 140 KPFILYTGIDAS-GQQVQNLAMPENL-SDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (431)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~lA~S~D~-~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~ 217 (431)
+++||||+.... ....+++|+|+|. . ..|++. +||+....+......+||.++ .+++|++||++++.. .
T Consensus 69 ~yyl~ys~~~~~~~~~~i~va~s~~~~~----gpw~~~--~~v~~~~~~~~~~~~iDp~vf-~d~dG~~Yl~~~~~~--~ 139 (288)
T cd08998 69 KYYLYYSVSTFGSNRSAIGLATSDTLPD----GPWTDH--GIVIESGPGRDDPNAIDPNVF-YDEDGKLWLSFGSFW--G 139 (288)
T ss_pred EEEEEEEEEeCCCCceEEEEEEeCCCCC----CCCEEc--ceeeecCCCCCCcccccCCEE-EcCCCCEEEEeeecc--C
Confidence 999999986542 4567789999875 2 479874 588754332123467899965 546899999998642 1
Q ss_pred ceEEEEE-eCC---CCCcEEcccccccCC-CCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCC---eeeEE
Q 014058 218 GMAFVYW-SWD---FIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK---HDYYV 289 (431)
Q Consensus 218 G~i~ly~-S~D---l~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~---~~~Y~ 289 (431)
| +.+.+ ++| ...|......+.... .....|-|.+|+-+ | +++|++|..... ...|.
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~~~~~~~~~~y~ 203 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYGGCCAGEDSTYN 203 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcchhcCCCCCceE
Confidence 2 22333 223 123321111121111 23468999999987 5 788888753221 24455
Q ss_pred Eeee
Q 014058 290 LGTY 293 (431)
Q Consensus 290 vG~~ 293 (431)
++-+
T Consensus 204 v~~~ 207 (288)
T cd08998 204 IRVG 207 (288)
T ss_pred EEEE
Confidence 5443
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-12 Score=127.93 Aligned_cols=189 Identities=19% Similarity=0.092 Sum_probs=128.7
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC----ccCCCCeEeecEEEcc-CCeEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG----PYDINSCWSGSVTILP-GDKPFI 143 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~----~~D~~gv~SGsav~~~-dg~~~l 143 (431)
|+. +++++|+|++|-.....+..+ ...|...+|+||+||+.++.+|.+.. .....++|.++++..+ +|+++|
T Consensus 5 ~~~-i~~~~~~yY~ygs~~~~~~~~--~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m 81 (265)
T cd08985 5 GGG-ILKVGGTYYWYGENKGGGDTA--FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVM 81 (265)
T ss_pred cCc-eEEECCEEEEEEEecCCCCcc--cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEE
Confidence 454 788999999998765432111 34688899999999999999997764 2345678999988753 689999
Q ss_pred EEeeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 144 ~YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
+|+.... .....+++|+|++.. ..|+... .+. +. ....|||.|+ .++||++||++++..+ ..+.+
T Consensus 82 ~~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~---~~~~~Dp~vf-~DdDG~~Yl~~~~~~~--~~i~i 147 (265)
T cd08985 82 WMHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PL---GYQSRDFGLF-VDDDGTAYLLYSDRDN--SDLYI 147 (265)
T ss_pred EEEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CC---CCCccCCceE-EcCCCCEEEEEecCCC--CceEE
Confidence 9998643 245678899998764 3566532 221 11 2457999965 5578999999987532 23445
Q ss_pred EE-eCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC---CCeeeEEEee
Q 014058 223 YW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS---DKHDYYVLGT 292 (431)
Q Consensus 223 y~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~---~~~~~Y~vG~ 292 (431)
.+ ++|+..+... +.. .......|||.+|+.+ | +|+|+.|... .....|++.+
T Consensus 148 ~~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 148 YRLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred EEeCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 55 3677777532 211 1234578999999997 5 8888887632 2345666654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.2e-12 Score=123.94 Aligned_cols=178 Identities=18% Similarity=0.207 Sum_probs=117.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc--c----CCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP--Y----DINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~--~----D~~gv~SGsav~~~d 138 (431)
+..-||. +++++|+|+||.... .+ ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~----~~--~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSF----EY--FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HD 77 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCc----cc--CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-EC
Confidence 4567999 888999999885321 11 235889999999999999988854321 1 345799999877 49
Q ss_pred CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC---
Q 014058 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--- 215 (431)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--- 215 (431)
|+++|+|+.........+.+|+|++.. ..|+. |++.. ....||.|+ .+++|++||+++....
T Consensus 78 g~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf-~d~dG~~Y~~~~~~~~~~~ 142 (288)
T cd09000 78 GTFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLF-FDDDGKVYLVGNGWDERRG 142 (288)
T ss_pred CEEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCcee-EcCCCCEEEEecccCCccc
Confidence 999999998653234456788887764 35652 33321 145799965 4468999999886432
Q ss_pred --CcceEEEEEeCCCCCcEEcccc--cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 216 --NEGMAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 216 --~~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
..+.+.+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 143 ~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 143 YNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred cCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 1234555543 33345444332 2222233578999999987 5 788888753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.6e-11 Score=120.15 Aligned_cols=183 Identities=20% Similarity=0.246 Sum_probs=126.9
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccC--CCCe-EeecEEEccCCeE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD--INSC-WSGSVTILPGDKP 141 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D--~~gv-~SGsav~~~dg~~ 141 (431)
+..-||. +++++|+|+||+...+.. ..+..++|+||+||+..+.++.+....+ ..+. |.+.++. .+|++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~------~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~y 79 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG------PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKY 79 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE------SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC------CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeE
Confidence 5567999 889999999998765432 4588999999999999998887664333 2333 9999876 59999
Q ss_pred EEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC--cce
Q 014058 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--EGM 219 (431)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~--~G~ 219 (431)
+|+|+.........+.+|+|++.. ..|+... ...+. .....||.|+ .+++|++||+++..... .+.
T Consensus 80 y~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~~ 147 (286)
T PF04616_consen 80 YMYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGGG 147 (286)
T ss_dssp EEEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEE-EETTSEEEEEEEESTTTSSEEE
T ss_pred EEEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEE-EecCCCcEEeCcccCCCcccee
Confidence 999993222355668899998764 4788653 22222 2356799965 44679999999886532 234
Q ss_pred EEEEE-eCCCCCcEEcc-cccccC---CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC
Q 014058 220 AFVYW-SWDFIHWTKLD-HPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (431)
Q Consensus 220 i~ly~-S~Dl~~W~~~~-~~l~~~---~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 282 (431)
|.+.+ ++|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 148 i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 148 IYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred EEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 55555 46777766543 222222 235689999999997 5 7888888643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.7e-11 Score=118.09 Aligned_cols=183 Identities=12% Similarity=0.072 Sum_probs=121.7
Q ss_pred CCCccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEcc-CCe
Q 014058 64 QNWINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILP-GDK 140 (431)
Q Consensus 64 ~gw~NDPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~-dg~ 140 (431)
.+-+.||. +++. +|+|||++.-.-....+.....+.+++|+||+||++.+.++.... ...++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35567999 6776 899999997643222221156799999999999999887652211 23568999988754 689
Q ss_pred EEEEEeeccCC---Cc--eeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC
Q 014058 141 PFILYTGIDAS---GQ--QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID 215 (431)
Q Consensus 141 ~~l~YTg~~~~---~~--~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~ 215 (431)
++|+|+..... .. ..+..+.+.|. .+|++. .+++.. .....|+.++ +. +|+|||++....+
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt~Df-----~tft~p--~~~~~~-----~~~~ID~~v~-~~-~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTTSDF-----VTFTEP--KVWIDL-----GANVIDTTVV-KV-GGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEecCcc-----cccCCC--eEeecC-----CCCeEeeEEE-Ee-CCEEEEEEecCCC
Confidence 99999986532 12 22333333353 688752 466642 1356799854 43 5999999975432
Q ss_pred CcceEEEEEeCCCC-CcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEee
Q 014058 216 NEGMAFVYWSWDFI-HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (431)
Q Consensus 216 ~~G~i~ly~S~Dl~-~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 280 (431)
+.|.+.+|++|. .|+...... .......|-|.+|+.+.. .+|+|+++.
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 457788899986 687654321 122346899999999832 288888765
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.8e-12 Score=129.35 Aligned_cols=197 Identities=22% Similarity=0.326 Sum_probs=125.6
Q ss_pred cceEECCE--EEEEEEECCCCCCCCCcceEEEEEeCCCccceecc-cccCCCCccCCCCeEeecEEEccCCeEEEEEeec
Q 014058 72 GPMYYKGV--YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (431)
Q Consensus 72 G~i~~~G~--YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 148 (431)
|++.++|. +||+|...-. ..+ ..+.|.|.|+|.+||+..+ ++|.|+..++..||....++.. +|+++|+||+.
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~-~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yymtYta~ 111 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIG-SSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYYMTYTAY 111 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSS-EEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCc-eeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEEEEEEEe
Confidence 56666666 8999876432 222 3489999999999999885 7899999999899999999875 89999999998
Q ss_pred cCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEe
Q 014058 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS 225 (431)
Q Consensus 149 ~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S 225 (431)
+. ....+++|+|+|. .+|+|.. +++.... ......-+|-..+-...+|+|+|+.. .+.|.+.+|
T Consensus 112 ~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S 178 (312)
T PF04041_consen 112 SG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYS 178 (312)
T ss_dssp ES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEE
T ss_pred cC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEec
Confidence 74 4567899999985 8999974 2222111 00011224544222224899999998 346789999
Q ss_pred CCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEee-CCCCeeeEEEee--ecC
Q 014058 226 WDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL-FSDKHDYYVLGT--YDP 295 (431)
Q Consensus 226 ~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~-~~~~~~~Y~vG~--~d~ 295 (431)
+|+++|+....++... ..+.||+ .+++. |.. +..-..-|++++.. .......|.+|- +|.
T Consensus 179 ~Dl~~W~~~~~~~~~~-~~~~~d~---~kiG~-g~p-----Pi~t~~GwL~iyHG~~~~~~~~Y~~g~~LlD~ 241 (312)
T PF04041_consen 179 PDLIHWGNHREPLLSP-RPGWWDS---SKIGA-GPP-----PIKTDEGWLLIYHGNVTDEGRVYRLGAALLDL 241 (312)
T ss_dssp SSSSSEEEEBETSB---STTSSCS---SEEEE--S------EEEETTEEEEEEEEEESSTTTEEEEEEEEE-S
T ss_pred CCcccccccccccccC-CCCcChh---hcccC-CCC-----ceEecCCEEEEEeccccCCCCEEEEEEEEEcC
Confidence 9999998765544432 3456776 34431 110 00001248877663 223445688886 454
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.2e-11 Score=121.72 Aligned_cols=186 Identities=16% Similarity=0.282 Sum_probs=123.3
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCC---------CCCCcceEEEEEeCCCccceecccccCCC--CccCCCCeEeecE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGP---------LFGDKMIWAHSVSYDLINWIHLSHALCPS--GPYDINSCWSGSV 133 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~---------~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~--~~~D~~gv~SGsa 133 (431)
.+.-||. ++.++|+|+||....-... .+. ...+-..+|+||++|+.++.++.|. ..+. .++|.+.+
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~-~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v 83 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYN-INDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSI 83 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccc-cCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCce
Confidence 4567999 6789999999987643221 122 3458889999999999999988743 2343 47899998
Q ss_pred EEccC----CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCCC-CCccCCeEEEecCCCeEE
Q 014058 134 TILPG----DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKD-DMFRDPTTAWQAPDGRWR 207 (431)
Q Consensus 134 v~~~d----g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p-~~~~~-~~~RDP~Vv~~~~~g~~~ 207 (431)
+.. + |+++|+|+.. ...+++|+|++.. ..|+...++|++... ++... ..-.||.++ .++||++|
T Consensus 84 ~~~-~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f-~DdDG~~Y 153 (311)
T cd09003 84 AVK-KINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVF-VDDDGQGY 153 (311)
T ss_pred EEe-ccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeE-ECCCCCEE
Confidence 864 6 9999999853 2457899998764 468865456777432 22111 123699964 45789999
Q ss_pred EEEeeeeC-----CcceEEEEE-eCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 208 VLVGGQID-----NEGMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 208 M~~ga~~~-----~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
|+++.... ..+.+.+.+ ++|+..-. ++... ......+|.|.+++.+ | +++|++|..
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~-i~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVT-IDAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceecc--CCceE-ccCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 99985321 123345555 45665432 32211 1123579999999987 6 788888754
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.2e-11 Score=116.98 Aligned_cols=137 Identities=23% Similarity=0.346 Sum_probs=97.4
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccC-------CCCccCCCCeEeecEEEc
Q 014058 65 NWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC-------PSGPYDINSCWSGSVTIL 136 (431)
Q Consensus 65 gw~NDPnG~i~~~-G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~-------P~~~~D~~gv~SGsav~~ 136 (431)
+.+.||. +++.+ |+|||||...... ... ...+++|+|+|+++|+..+..+. +....+...+.++.++.+
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~-~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~ 140 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGA-VQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRD 140 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCC-cceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEE
Confidence 3466888 66777 9999999976532 222 67899999999999999876542 223334456788888876
Q ss_pred cC-CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 137 PG-DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 137 ~d-g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
++ |+++|+|++........+.+|.|+|+ .+|++....+ ....+.....+++|.++ + .+|+|+|++.+.
T Consensus 141 ~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 141 EEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDDGQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccCCcCccceEE-E-ECCEEEEEEEec
Confidence 43 89999999875445567889999885 7999864322 11222334678999964 4 369999999875
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-10 Score=114.07 Aligned_cols=180 Identities=17% Similarity=0.182 Sum_probs=115.7
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc-------CCCCeEeecEEEccCCe
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGDK 140 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~-------D~~gv~SGsav~~~dg~ 140 (431)
.||. ++.++|+|+||... . .+..++|+||+||+.++.+|.+...+ ...++|.+.++. .+|+
T Consensus 1 ~DP~-vi~~~~~YY~~~T~------~----g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~ 68 (279)
T cd08988 1 HDPV-IIKEGDTWYVFGTG------P----GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGK 68 (279)
T ss_pred CCCE-EEEECCEEEEEEec------C----CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCE
Confidence 3898 78889999998652 1 37789999999999999888644322 235799999876 5899
Q ss_pred EEEEEeeccC-CCceeEEEEEecCCCCCcc-ceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcc
Q 014058 141 PFILYTGIDA-SGQQVQNLAMPENLSDPLL-KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (431)
Q Consensus 141 ~~l~YTg~~~-~~~~~q~lA~S~D~~d~~l-~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G 218 (431)
++|||+.... .....+++|+|++...++- ..|++ ..+++..... ......||.++++ +||++||++++.. .|
T Consensus 69 yylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~--~g 142 (279)
T cd08988 69 FYLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIFD-QHGQPWLSFGSFW--GG 142 (279)
T ss_pred EEEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEEc-CCCCEEEEecccC--CC
Confidence 9999997643 2346778999988754431 12443 2466643211 1234579996544 7899999998632 22
Q ss_pred eEEEEE-eCCCCCcEEcccc--ccc-CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 219 MAFVYW-SWDFIHWTKLDHP--LYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 219 ~i~ly~-S~Dl~~W~~~~~~--l~~-~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
|.+.+ ++|+..-...+.. +.. .......|-|-+++-+ | +++|+.|..
T Consensus 143 -i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 143 -IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred -EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 33333 4554432111111 111 1123468999999986 5 778877753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-10 Score=112.45 Aligned_cols=134 Identities=19% Similarity=0.187 Sum_probs=93.2
Q ss_pred CCccCCCcceEE--CCEEEEEEEECCCC-CCCCCcceEEEEEeCCCccceecccccCCCC-ccCCCCeEeecEEEccCCe
Q 014058 65 NWINDPNGPMYY--KGVYHLFYQYNPLG-PLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDK 140 (431)
Q Consensus 65 gw~NDPnG~i~~--~G~YHlFyq~~P~~-~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~-~~D~~gv~SGsav~~~dg~ 140 (431)
.++-||. ++++ +|+|+||....... ..+ ...+.+.+|+||+||+.++.++.+.. .+...++|.+.++. .+|+
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~--~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~ 79 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGE--GTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGR 79 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccC--CCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCE
Confidence 4568998 7787 99999999754322 111 24589999999999999998886543 23346789999875 5999
Q ss_pred EEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 014058 141 PFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (431)
Q Consensus 141 ~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga 212 (431)
++|+|+..... ....+.+|+|++.. -.|+.....|+... .....||.+ |.++||++||+++.
T Consensus 80 yyly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~-----~~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 80 YYMFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE-----DWMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC-----CCceEcCce-EEcCCCCEEEEEEe
Confidence 99999865432 22346788887764 35775433344221 123579985 55578999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-10 Score=114.04 Aligned_cols=172 Identities=18% Similarity=0.234 Sum_probs=113.0
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecc-cccCCCC------------------ccCCC
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLS-HALCPSG------------------PYDIN 126 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~-~aL~P~~------------------~~D~~ 126 (431)
+..|. +++++|+|||||+..-....-......|.|+|++.. .|+++. ++|.|.. .+|..
T Consensus 112 vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~ 190 (349)
T cd08992 112 VFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSH 190 (349)
T ss_pred eECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccC
Confidence 34565 778999999999853211111103568888888876 698774 5566652 25666
Q ss_pred CeEeecEEEccCCeEEEEEeeccC-------CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEE
Q 014058 127 SCWSGSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAW 199 (431)
Q Consensus 127 gv~SGsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~ 199 (431)
++...+++. .+|+++|||+|+.. ...+.+++|+|+++. ..|+|.+.|||+... + ..+ ||
T Consensus 191 ~v~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~~------~--~~~-~~ 256 (349)
T cd08992 191 KVHDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNSG------H--ETC-VW 256 (349)
T ss_pred ceECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCCC------C--ceE-EE
Confidence 777777655 59999999999752 135678999998875 468898889998422 2 236 68
Q ss_pred ecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 200 ~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
.. .+.+-.++.....+.|. +..|+|+++|+....+...+...+..+|||-+.-+
T Consensus 257 ~~-~~~~~~~~~~d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 257 QY-KGGIAAMLTTDGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred ec-CCceEEEEeccCCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 84 45673444443333454 67899999999766433333344566677666554
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.8e-09 Score=105.60 Aligned_cols=173 Identities=18% Similarity=0.198 Sum_probs=112.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc------CCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY------DINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~------D~~gv~SGsav~~~d 138 (431)
+..-||. +++++|+|+||+..... ...+...+|+||+||+..+.++...... ...++|.+.++. .+
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~------~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW------FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YD 77 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc------CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-EC
Confidence 4567999 88999999999753211 1236778999999999998877543211 235799999876 59
Q ss_pred CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcc
Q 014058 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (431)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G 218 (431)
|+++|+|+.........+++|++++..+ .|+. |+... ....||.++ .++||+.||+.+.. +
T Consensus 78 G~yy~yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f-~D~dG~~Yl~~~~~----~ 138 (269)
T cd08989 78 GKFWLIYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLF-HDDDGKKYLINMGW----S 138 (269)
T ss_pred CEEEEEEeccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceE-EcCCCCEEEEecCC----C
Confidence 9999999976433445678999877643 4653 44321 134799964 44799999998752 2
Q ss_pred eEEEEE-eCCCCCcEEcccc----cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 219 MAFVYW-SWDFIHWTKLDHP----LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 219 ~i~ly~-S~Dl~~W~~~~~~----l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
.|.+.+ +.|+..= .+.+ +.........|-|.+++.+ | +++|++|..
T Consensus 139 ~i~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~ 189 (269)
T cd08989 139 GIRLQEYSPAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEG 189 (269)
T ss_pred cEEEEEEChhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeC
Confidence 233433 2332211 1111 1111223468999999876 5 788888764
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.3e-09 Score=106.61 Aligned_cols=169 Identities=14% Similarity=0.094 Sum_probs=111.6
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc-----------cCCCCeEeecE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-----------YDINSCWSGSV 133 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~-----------~D~~gv~SGsa 133 (431)
+..-||. +++++|+|+||.... .+ ...+..++|+||+||+.++.++.+... .-..++|.+.+
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~----~~--~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v 81 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTM----HY--SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSL 81 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCc----cc--CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCce
Confidence 4557999 788999999997532 11 124678899999999999877643221 11247899998
Q ss_pred EEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 134 TILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
+.. +|+++|+|+... ..+.+|+|++.. ..|+.. .++. ...||.++ .+++|+.||+++..
T Consensus 82 ~~~-~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~~---------~~iDp~~f-~D~dG~~Yl~~~~~ 140 (269)
T cd09001 82 RYH-NGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALDG---------GYHDPSLL-FDDDGTAYLVYGGG 140 (269)
T ss_pred EEE-CCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcCC---------CcccCceE-EcCCCCEEEEeCCC
Confidence 764 999999999752 346788887753 356542 1111 34699964 44789999999753
Q ss_pred eCCcceEEEEE-eCCCCCcEEcccccccCC--CCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 214 IDNEGMAFVYW-SWDFIHWTKLDHPLYSVQ--ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 214 ~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~--~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
.+.+.+ ++|+....-....+.... .....|-|.+++-+ | +++|++|..
T Consensus 141 -----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~ 191 (269)
T cd09001 141 -----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAW 191 (269)
T ss_pred -----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecC
Confidence 233444 667666521111122211 13578999999876 5 788888864
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.2e-09 Score=105.10 Aligned_cols=179 Identities=17% Similarity=0.148 Sum_probs=112.3
Q ss_pred CccCCCcceEE-CCEEEEEEEECCCCC----CCCCcceEEEEEeCCCccceecccccCCCCc------------cCCCCe
Q 014058 66 WINDPNGPMYY-KGVYHLFYQYNPLGP----LFGDKMIWAHSVSYDLINWIHLSHALCPSGP------------YDINSC 128 (431)
Q Consensus 66 w~NDPnG~i~~-~G~YHlFyq~~P~~~----~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~------------~D~~gv 128 (431)
||-||. ++.. +|+|+|+......+. .|........++|+||+||+.++.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 678999 5665 679999987542211 1110245778999999999999888754321 124578
Q ss_pred EeecEEEccCCeEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCC-cEEcCCCCCCCCCccCCeEEEecCCCeE
Q 014058 129 WSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGN-PVMTPPNGVKDDMFRDPTTAWQAPDGRW 206 (431)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~-Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~ 206 (431)
|.+.+.. .+|+++|+|+..... ....+++|++++.. ..|+..... ++ ..-.||.+ |.++||++
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~-f~D~DG~~ 144 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSL-FEDDDGKV 144 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCce-EEcCCCCE
Confidence 9998876 589999999976432 34556778777653 357654221 11 13469995 55578999
Q ss_pred EEEEeeeeCCcceEEEEEeCCCCCcEEcccccccC----CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 207 RVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 207 ~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~----~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
||+++.. .+ .--++|+....-....+... ......|-|.+++.+ | +++|++|..
T Consensus 145 Yl~~~~~-----~i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 145 YLVWHNT-----LI-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEEeeCC-----ce-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 9998753 11 12255665443111111111 112357999999976 5 888888763
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.3e-09 Score=106.39 Aligned_cols=98 Identities=17% Similarity=0.225 Sum_probs=75.5
Q ss_pred ecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcC--CCCCCCCCccCCeEEEecCCCeEEE
Q 014058 131 GSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP--PNGVKDDMFRDPTTAWQAPDGRWRV 208 (431)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~--p~~~~~~~~RDP~Vv~~~~~g~~~M 208 (431)
..++. .||+++|+|++...+....+++|+|+|+ .+|++.+ +|++.+ ...++...++||.|+. .+|+|+|
T Consensus 3 P~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~~--~~g~y~m 73 (268)
T cd08993 3 PAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIVK--IDDTYYI 73 (268)
T ss_pred CeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEEE--ECCEEEE
Confidence 44555 5999999999876556778999999996 7999875 565533 2334567899999754 4889999
Q ss_pred EEeeee--CCcceEEEEEeCCCCCcEEcccc
Q 014058 209 LVGGQI--DNEGMAFVYWSWDFIHWTKLDHP 237 (431)
Q Consensus 209 ~~ga~~--~~~G~i~ly~S~Dl~~W~~~~~~ 237 (431)
++++.. ....++.+++|+|+.+|++.+.+
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998865 34567899999999999988653
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.4e-09 Score=102.50 Aligned_cols=188 Identities=15% Similarity=0.132 Sum_probs=118.0
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceeccccc--CCCC-ccCCCCeEeecEEEccCCeEEEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSG-PYDINSCWSGSVTILPGDKPFILY 145 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL--~P~~-~~D~~gv~SGsav~~~dg~~~l~Y 145 (431)
||. ++.++++|+|++.-.. .....++|+||++|+.....+ .+.. .....++|.+.++. .+|+++|+|
T Consensus 2 DP~-v~~~~d~yY~~~T~~~--------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyy 71 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE--------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYF 71 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC--------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEE
Confidence 898 7888999999986421 247889999999999875432 2322 12346799999876 599999999
Q ss_pred eeccC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC---CcceE
Q 014058 146 TGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGMA 220 (431)
Q Consensus 146 Tg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~---~~G~i 220 (431)
+.... ...+.+++|.+++..++ +..|+.. .+++.... ..--||.++ .+ +|++||+++.... ....+
T Consensus 72 s~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~~----~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i 142 (288)
T cd08980 72 AAGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPTD----RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNL 142 (288)
T ss_pred EccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCCC----CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccE
Confidence 97653 24456778887652112 3578864 24432111 233699964 43 5999999975431 12335
Q ss_pred EEEEeCCCCCcEEcccc--cccCCC------CCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEee
Q 014058 221 FVYWSWDFIHWTKLDHP--LYSVQE------TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (431)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--l~~~~~------~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 292 (431)
.+.+.++...+. +++ +..... ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 143 ~~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 143 YIAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 555655443443 321 221111 1457999999997 5 78888887543345566654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.6e-09 Score=101.17 Aligned_cols=120 Identities=18% Similarity=0.256 Sum_probs=84.9
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEe
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YT 146 (431)
.-||. +++++|+|+|+.... .+ ...+...+|+||+||+.++.++.+. ..++|.+.++. .+|+++|+|+
T Consensus 15 ~~DP~-i~~~~~~yY~~~t~~----~~--~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys 82 (280)
T cd09002 15 YPDPS-ILRDGEDYYMTHSSF----KY--TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFP 82 (280)
T ss_pred CCCCE-EEEECCEEEEEEcch----hc--CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEE
Confidence 45998 888999999976421 11 2357888999999999998877542 35789998865 6999999999
Q ss_pred eccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 014058 147 GIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (431)
Q Consensus 147 g~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga 212 (431)
.........+.+|++.+.. ..|++ |+... ....-||.|++. ++|++||+++.
T Consensus 83 ~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~D-ddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVVD-EDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEEc-CCCCEEEEECC
Confidence 8654445667889887654 35654 23111 112359996554 78999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.4e-08 Score=96.27 Aligned_cols=203 Identities=16% Similarity=0.318 Sum_probs=127.5
Q ss_pred eecCCCC---ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccC---CCCccCCCCeEeecE
Q 014058 60 FRPPQNW---INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC---PSGPYDINSCWSGSV 133 (431)
Q Consensus 60 ~~p~~gw---~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~---P~~~~D~~gv~SGsa 133 (431)
.+|..|| +.||- +++++|+||+|-..+. ...|+ -...| |++|+.++.|+. .... ...+.|.+.+
T Consensus 14 ~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~-~~~~~-----s~~~S--f~~Ws~~g~A~q~~l~~~~-~~~~fwAPqV 83 (303)
T cd08987 14 ISPKSDWIVAIKDPT-VVYYNGRYHVYATTAD-AGNYG-----SMYFN--FTDWSQAASATQYYLQNGN-MTGYRVAPQV 83 (303)
T ss_pred ccCCCCCeeeecCCe-EEEECCEEEEEEccCC-CCCce-----eeeec--ccCHhHhccchhhcccCCC-CCcccccCEE
Confidence 3566788 68998 6788999999976543 11221 23555 999999987662 1111 2345788887
Q ss_pred EE-ccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEee
Q 014058 134 TI-LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (431)
Q Consensus 134 v~-~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga 212 (431)
+. .++++++|+|+. . ..++|+|+|..+|+ .|... .|++...........-|+.||- .+++.||+.+.
T Consensus 84 fyf~pk~kwYL~Yq~-~-----~~~yaTs~dp~~P~--~ws~~--qpl~~~~~~~~~~~~ID~~vI~--Dd~~~YLff~~ 151 (303)
T cd08987 84 FYFAPQNKWYLIYQW-W-----PAAYSTNSDISNPN--GWSAP--QPLFSGTPNGSPGGWIDFWVIC--DDTNCYLFFSD 151 (303)
T ss_pred eeeccCCEEEEEEec-C-----ceEEEeCCCCCCCC--ccCCC--cccccCcccCCCCCccceeEEe--CCCCEEEEEec
Confidence 62 368999999994 1 24588999988774 67753 5776432212234567999753 47888888854
Q ss_pred eeCCcceEEEEEeC-CCCCcEEc-cc---ccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeee
Q 014058 213 QIDNEGMAFVYWSW-DFIHWTKL-DH---PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDY 287 (431)
Q Consensus 213 ~~~~~G~i~ly~S~-Dl~~W~~~-~~---~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~ 287 (431)
. .| .||+|+ .+.+.... +. .+.........|-|+++++. | ..+++|+++..+..+..
T Consensus 152 d---nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~~r 213 (303)
T cd08987 152 D---NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDGGR 213 (303)
T ss_pred C---CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCCCC
Confidence 3 34 478763 22222110 11 11112234679999999998 5 23899999987654556
Q ss_pred EEEeeecCC--CCeeecC
Q 014058 288 YVLGTYDPQ--MDIFSPD 303 (431)
Q Consensus 288 Y~vG~~d~~--~~~f~p~ 303 (431)
|+++ +..+ .+.|+|.
T Consensus 214 Yfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 214 YFRS-WTATSLDGPWTPL 230 (303)
T ss_pred eEEE-EEcCCCCCCceec
Confidence 8888 4432 3455554
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.90 E-value=8.3e-08 Score=95.27 Aligned_cols=171 Identities=18% Similarity=0.200 Sum_probs=102.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEee
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 147 (431)
-||. +++++|+|+|+-... + +..+|+||++|+..+.++. ..++|.+++.. .+|+++++|+.
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~-----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G-----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C-----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 5998 788899999885431 1 3579999999999987763 45789999876 58886665553
Q ss_pred ccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEE---
Q 014058 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW--- 224 (431)
Q Consensus 148 ~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~--- 224 (431)
. .+.+|+|.|...+ .|+.. .+. ......||.|+ .++||+.||++|.... .+ |.+.+
T Consensus 65 ~------~~~v~~s~~p~gp---~w~~~--~~~-------~~~~~IDp~vf-~DdDGk~Yl~~g~~~~-~~-i~~~eL~~ 123 (295)
T cd08982 65 Y------NSRIYKTADPLSG---PWEEV--DKS-------FPPGLADPALF-IDDDGRLYLYYGCSNN-YP-LRGVEVDP 123 (295)
T ss_pred C------CceEEEeCCCCCC---Ccccc--ccc-------cCCCccCCceE-ECCCCCEEEEEecCCC-CC-eEEEEECc
Confidence 2 2347888775321 35432 010 11245699965 4468999999975321 11 11111
Q ss_pred ---------------eCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEE
Q 014058 225 ---------------SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYV 289 (431)
Q Consensus 225 ---------------S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~ 289 (431)
+..-..|+..+.-.......+..|-|.+++.+ | +++|++|........|.
T Consensus 124 d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y~ 188 (295)
T cd08982 124 DTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTYA 188 (295)
T ss_pred ccCCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcEe
Confidence 22223455433211101123457888888865 5 78888876443333455
Q ss_pred Eeee
Q 014058 290 LGTY 293 (431)
Q Consensus 290 vG~~ 293 (431)
+|-.
T Consensus 189 v~~a 192 (295)
T cd08982 189 DGVY 192 (295)
T ss_pred EEEE
Confidence 5543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.3e-08 Score=95.37 Aligned_cols=146 Identities=20% Similarity=0.302 Sum_probs=109.4
Q ss_pred cceEECCEEEEEEEE------CCCCCCCCCcceEEEEEeCCCcc-ceecc-cccCC-CCccCCCCeEeecEEEccCCeEE
Q 014058 72 GPMYYKGVYHLFYQY------NPLGPLFGDKMIWAHSVSYDLIN-WIHLS-HALCP-SGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 72 G~i~~~G~YHlFyq~------~P~~~~wg~~~~WgHa~S~Dlv~-W~~~~-~aL~P-~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
++++.++++||+|+- .+. . ..|.+-|.|+|+++ |+.++ +.+.| ..+++..||..+.++.. |++++
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~-~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~~y~ 108 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----S-ISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GGRYY 108 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----c-ceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CCEEE
Confidence 578899999999997 222 2 57899999999999 98885 78889 55778889999999875 99999
Q ss_pred EEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC---Ccce
Q 014058 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGM 219 (431)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~---~~G~ 219 (431)
|.|||.+ +..+..++|+++|. .+|+|.+ +++.+ +.||-.++=...+|+|.|+---... ..+-
T Consensus 109 mtYTa~s-~~g~~~~la~t~~f-----~n~~rig--~i~~p-------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~n 173 (314)
T COG2152 109 MTYTAYS-DKGPRLALAVTKDF-----LNWERIG--AIFPP-------DNKDAALFPKKINGKYALLHRPVLGEYGMKGN 173 (314)
T ss_pred EEEEecC-CCCcccchhhhhhh-----hhhhhcc--cccCC-------CCCCceEeeEEecCcEEEEEeecccccCccCc
Confidence 9999985 46778889999885 6899863 34332 2344442212247889888653332 2467
Q ss_pred EEEEEeCCCCCcEEccccc
Q 014058 220 AFVYWSWDFIHWTKLDHPL 238 (431)
Q Consensus 220 i~ly~S~Dl~~W~~~~~~l 238 (431)
|.+..|+|+.+|.....++
T Consensus 174 iwia~S~dl~~w~~~~~~l 192 (314)
T COG2152 174 IWIAFSPDLEHWGIHRKLL 192 (314)
T ss_pred eEEEEcCCccCCCccceee
Confidence 8999999999998764444
|
|
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.89 E-value=1e-07 Score=97.44 Aligned_cols=193 Identities=18% Similarity=0.167 Sum_probs=117.9
Q ss_pred CCCcceE-ECCEEEEEEEECCCC----CCCCCcceEEEEEeCCCc----cceecccccCCCCcc-CCCCeEeecEEEcc-
Q 014058 69 DPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLI----NWIHLSHALCPSGPY-DINSCWSGSVTILP- 137 (431)
Q Consensus 69 DPnG~i~-~~G~YHlFyq~~P~~----~~wg~~~~WgHa~S~Dlv----~W~~~~~aL~P~~~~-D~~gv~SGsav~~~- 137 (431)
|+.|-+. ++|.--+|-+-.|.. ..++ ..|+++.-|++.. +|+..+.++...... ...--|||||++..
T Consensus 64 d~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~-~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 64 DADGNVVNYNGYQVVFALTADRHEDPDDRHD-DARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp -TTSSBEEBTTEEEEEEEEE-TT--GGGCSC-GEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred cccccEEEECCEEEEEEEecCCccCCccccC-CcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 4555443 588555666665543 2455 7899999999998 999999877555431 22456999999987
Q ss_pred CCeEEEEEeeccC----CCceeEE-----EEEecCCCCCccceeeeecCCcEEcCCCCCC-------CCCccCCeEEEec
Q 014058 138 GDKPFILYTGIDA----SGQQVQN-----LAMPENLSDPLLKDWVKFSGNPVMTPPNGVK-------DDMFRDPTTAWQA 201 (431)
Q Consensus 138 dg~~~l~YTg~~~----~~~~~q~-----lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~-------~~~~RDP~Vv~~~ 201 (431)
||++.||||.... ...|+.. ++...+. .-.+..|++. ..++.++..++ ...||||++|-..
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP 219 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFEGDGKHYQTYEQNPGYAFRDPHVFEDP 219 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES--SSSB--HHHHHH---EEEEEEEET
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeeccchhhhhChhhcCCccccCCeeEECC
Confidence 8999999998643 1223322 2233332 2223445543 34555332221 2579999965443
Q ss_pred CCCeEEEEEeeee---C------------------------------CcceEEEEEeCC--CCCcEEcccccccCCCCCc
Q 014058 202 PDGRWRVLVGGQI---D------------------------------NEGMAFVYWSWD--FIHWTKLDHPLYSVQETGM 246 (431)
Q Consensus 202 ~~g~~~M~~ga~~---~------------------------------~~G~i~ly~S~D--l~~W~~~~~~l~~~~~~~~ 246 (431)
++|+-||+.-+.. + ..|+|.|.+.+| +..|+...+++.+..-...
T Consensus 220 ~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~de 299 (428)
T PF02435_consen 220 EDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVNDE 299 (428)
T ss_dssp TTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS-
T ss_pred CCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceeccccccc
Confidence 7899999885432 0 146788888754 4679998755554444568
Q ss_pred eeeCcEEEeccCCccceecccCCCCeeeEEEEee
Q 014058 247 WECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (431)
Q Consensus 247 wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 280 (431)
.|-|+++.++ | ||+|+.+.
T Consensus 300 ~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 300 LERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp EEEEEEEEET--T-------------EEEEEEEE
T ss_pred ccCCcEEEEC--C-------------EEEEEEEe
Confidence 9999999998 6 88887554
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.8e-07 Score=88.68 Aligned_cols=132 Identities=20% Similarity=0.220 Sum_probs=86.7
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecc--cccCCCCccCCCCeEeecEEEcc-CCeEEEE
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS--HALCPSGPYDINSCWSGSVTILP-GDKPFIL 144 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~--~aL~P~~~~D~~gv~SGsav~~~-dg~~~l~ 144 (431)
-.|. +++.+|+|||||..+... ... ....++|+|+|+++|++.+ +.+.+...++...+-.+.++.++ +|+++|+
T Consensus 63 ~sgs-~~~~~g~~~l~YTg~~~~-~~~-~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~ 139 (280)
T cd08995 63 GTGS-VIKGEGTYHAFYTGHNLD-GKP-KQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWML 139 (280)
T ss_pred eEeE-EEeeCCEEEEEEEEECCC-CCC-cEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEE
Confidence 3455 567899999999875422 112 4679999999999999875 33432222333334466776653 5899999
Q ss_pred EeeccC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 145 YTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 145 YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|.+... .....+.++.|+|. ++|+.. .+++.+.. ...+.-|.+ ++ .+|+|+|+++.+.
T Consensus 140 ~g~~~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 140 LATRLLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGL---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred EEeccCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCC---cceeecceE-EE-ECCEEEEEEEecc
Confidence 986542 23445667788774 799875 45654322 234678885 44 5899999998754
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.3e-07 Score=93.17 Aligned_cols=108 Identities=22% Similarity=0.287 Sum_probs=81.2
Q ss_pred cCCCcceEECCEEEEEEEECCCCC----CCCCcceEEEEEeCCC-cccee-cccccCCCCc-cCCCCeEeecEEEccCCe
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGP----LFGDKMIWAHSVSYDL-INWIH-LSHALCPSGP-YDINSCWSGSVTILPGDK 140 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~----~wg~~~~WgHa~S~Dl-v~W~~-~~~aL~P~~~-~D~~gv~SGsav~~~dg~ 140 (431)
-+|. +++++|+|+|||....... ..+ ...+|.|+|+|+ -+|++ ..++|.|... +|..++..++++...+|+
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~-~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~ 158 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRN-NQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGS 158 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCC-CceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCC
Confidence 4676 6788999999999764311 122 568999999994 69998 4567777643 577788999988755899
Q ss_pred EEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcEE
Q 014058 141 PFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVM 181 (431)
Q Consensus 141 ~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi 181 (431)
++|+|+|.... ..+.+++|+|+|.. .+|+|....|++
T Consensus 159 ~~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 159 YLLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 99999998642 45788999998863 479987655654
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.2e-06 Score=85.85 Aligned_cols=155 Identities=12% Similarity=0.141 Sum_probs=98.1
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceeccccc-C-CCCccCCCCeEeecEEEccCCeEEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHAL-C-PSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL-~-P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
+..|. +++.+|+|||||..+-.+ .. ...+++|+|+|.. .|+..+..+ . +. +..+....++++++||+++|
T Consensus 62 ~waP~-v~~~~g~y~~~y~~~~~~--~~-~~~i~~a~s~~p~g~~~~~~~~~~~~~~---~~~~~~Dp~v~~d~dG~~Yl 134 (287)
T cd08999 62 FWAPD-VSYVNGKYVLYYSARDKG--SG-GQCIGVATADSPLGPFTDHGKPPLCCPE---GEGGAIDPSFFTDTDGKRYL 134 (287)
T ss_pred ccCce-EEEECCEEEEEEEeecCC--CC-CEEEEEEECCCCCCCCccCCcceEecCC---CCCCccCCCeEECCCCCEEE
Confidence 45666 788999999999876433 22 5679999999965 899875332 2 22 22345678888877899999
Q ss_pred EEeeccCC--CceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee--CC--
Q 014058 144 LYTGIDAS--GQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI--DN-- 216 (431)
Q Consensus 144 ~YTg~~~~--~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~--~~-- 216 (431)
+|.+.... ..+.+.++ .+.|+ .+|.... ..++.+...+....+.-|.++ + .+|+|||++.+.. ..
T Consensus 135 ~~~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~~~~~~~~~EgP~i~-k-~~g~yyl~~S~~~~~~~~~ 206 (287)
T cd08999 135 VWKSDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRNDEDWEGPLVEAPYLV-K-RGGYYYLFYSAGGCCSGAS 206 (287)
T ss_pred EEeccCCCCCCCceEEEEEeCCCC-----ccccCCc-EeeecccccccCCceEeeEEE-E-ECCEEEEEEEcCCccCCCC
Confidence 99764321 12223343 45553 5665321 233333222333456789854 5 4899999998753 11
Q ss_pred cceEEEEEeCCCC-CcEEccc
Q 014058 217 EGMAFVYWSWDFI-HWTKLDH 236 (431)
Q Consensus 217 ~G~i~ly~S~Dl~-~W~~~~~ 236 (431)
.=.+.+++|+++. .|+....
T Consensus 207 ~y~i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 207 TYAVGVARSKSLLGPYVKAPG 227 (287)
T ss_pred CEEEEEEEeCCCcCCcCCCCC
Confidence 2256788999987 8887543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.4e-06 Score=82.37 Aligned_cols=155 Identities=15% Similarity=0.134 Sum_probs=94.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
..+..|. +++.+|+|||||...... -. ....++|+|+|.. .|+..+..+.+.. .....++++.++||+++|
T Consensus 53 ~~~waP~-v~~~~g~yyl~ys~~~~~--~~-~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl 124 (294)
T cd08991 53 RGFWAPE-VYYYNGKFYMYYSANDRD--EK-TEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYL 124 (294)
T ss_pred CcEEccE-EEEECCEEEEEEEeccCC--CC-cceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEE
Confidence 3455787 889999999999876432 12 5778999999986 7887754333321 234578888887799999
Q ss_pred EEeeccCCC--ceeEEEEEecCCCCCccceeeeecC---CcEEcC-------C-C---CCCCCCccCCeEEEecCCCeEE
Q 014058 144 LYTGIDASG--QQVQNLAMPENLSDPLLKDWVKFSG---NPVMTP-------P-N---GVKDDMFRDPTTAWQAPDGRWR 207 (431)
Q Consensus 144 ~YTg~~~~~--~~~q~lA~S~D~~d~~l~~w~k~~~---~Pvi~~-------p-~---~~~~~~~RDP~Vv~~~~~g~~~ 207 (431)
+|+...... ......+.+.|. .+|..... .++..+ + . ..+.....-|.++ + .+|+||
T Consensus 125 ~~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~-k-~~g~yy 197 (294)
T cd08991 125 YYSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVL-K-HNGRYY 197 (294)
T ss_pred EEEecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEEE-E-ECCEEE
Confidence 998654321 233444566654 34432111 111111 0 0 0112235678754 4 478999
Q ss_pred EEEeeeeC--CcceEEEEEeCCC-CCcEEc
Q 014058 208 VLVGGQID--NEGMAFVYWSWDF-IHWTKL 234 (431)
Q Consensus 208 M~~ga~~~--~~G~i~ly~S~Dl-~~W~~~ 234 (431)
|++.+..- ..-.+.+++|+++ -.|+..
T Consensus 198 l~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 198 LTYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EEEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 99976431 1114667788874 689874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.9e-07 Score=88.89 Aligned_cols=89 Identities=22% Similarity=0.331 Sum_probs=63.5
Q ss_pred CCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-----CCcceEEEEEeCCCCCcEEcccccccC-CCCCceeeC
Q 014058 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNEGMAFVYWSWDFIHWTKLDHPLYSV-QETGMWECP 250 (431)
Q Consensus 177 ~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-----~~~G~i~ly~S~Dl~~W~~~~~~l~~~-~~~~~wECP 250 (431)
++||+.+.. ....+|||+|++..++|+|||+..... .....|.+++|+||.+|+..+..+... ..+.+| +|
T Consensus 5 ~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-AP 81 (276)
T cd08983 5 GNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-AP 81 (276)
T ss_pred CceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-Cc
Confidence 689997543 357899999776546889999886542 122358899999999999876543222 234467 99
Q ss_pred cEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 251 DIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 251 dlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
++|..+..| +|+|.+|..
T Consensus 82 ev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 82 EAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred cceEcCCCC-------------eEEEEEecc
Confidence 999987434 788887764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.6e-06 Score=82.34 Aligned_cols=153 Identities=12% Similarity=0.040 Sum_probs=96.2
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccc-cCCCCccCCCCeEeecEEEccCCeE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~a-L~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
.+-+..|. +++++|+|||||..... -+ ....++|+|+|.. .|+..... +.+ ...+......+++++++||++
T Consensus 61 ~~~~wAP~-i~~~~g~yy~yy~~~~~---~~-~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~ 134 (274)
T cd08990 61 KGQAWAPD-VVEKNGKYYLYFPARDK---DG-GFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQA 134 (274)
T ss_pred cCCcCcCe-EEEECCEEEEEEEeecC---CC-ceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCE
Confidence 34456777 78999999999987643 12 5679999999976 79987643 322 222234456788888778999
Q ss_pred EEEEeeccCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCC---CCCCCCCccCCeEEEecCCCeEEEEEeeeeCCc
Q 014058 142 FILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPP---NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (431)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p---~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~ 217 (431)
+|+|.+. +.+.++ .+.|. .+|+.. ..++..+ .......+.-|.+ ++ .+|+|||++++.. .
T Consensus 135 yl~~~~~-----~~~~~~~l~~d~-----~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~ 198 (274)
T cd08990 135 YLYWGGG-----LGLRVAKLKPDM-----LSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--P 198 (274)
T ss_pred EEEECCc-----CCEEEEEeCccc-----cccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--C
Confidence 9999864 223344 34443 566532 1233211 1111223457885 45 4899999998753 3
Q ss_pred ceEEEEEeCCCC-CcEEccccc
Q 014058 218 GMAFVYWSWDFI-HWTKLDHPL 238 (431)
Q Consensus 218 G~i~ly~S~Dl~-~W~~~~~~l 238 (431)
..+.+.+|+++. .|+..+.++
T Consensus 199 ~~~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 199 EEIAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred cEEEEEEcCCCCCCcccCcEEe
Confidence 456677888775 577655443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.8e-06 Score=83.35 Aligned_cols=156 Identities=15% Similarity=0.140 Sum_probs=97.7
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
.+-+.+|. +++.+|+|+|||.....+ .. ....+.|+|+|+.+|....... +.. ....++..++++.++||+++|
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~-~~~i~~a~s~d~~g~~~~~~~~-~~~-~~~~~~iDp~vf~d~dg~~yl 129 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YN-GSGIGVATSEDPTGPFEDKVIR-PPT-SNNGNSIDPTVFKDDDGKYYL 129 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CC-cccEEEEECCCCCCCccccccC-cCc-cCCCCccCcceEEcCCCCEEE
Confidence 45677898 889999999999987542 22 5679999999999987653211 111 123456789998876799999
Q ss_pred EEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC--CcceE
Q 014058 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMA 220 (431)
Q Consensus 144 ~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--~~G~i 220 (431)
+|.+.... ....+.++.+++.. .+.. ..+++..........+..|.+ ++ .+|+|||++.+... ..-.+
T Consensus 130 ~~~~~~~~~~~~~i~~~~l~~~~-----~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~ 200 (271)
T cd08978 130 YYGSGDPGAGFGGIYISELTDDL-----TKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNI 200 (271)
T ss_pred EEecccCCCCCCcEEEEEECccc-----cccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceE
Confidence 99875321 23345566555431 2222 223321111112235678995 45 47999999976532 23356
Q ss_pred EEEEeCCCC-CcEEc
Q 014058 221 FVYWSWDFI-HWTKL 234 (431)
Q Consensus 221 ~ly~S~Dl~-~W~~~ 234 (431)
.+++|++.. .|+..
T Consensus 201 ~~~~s~~~~Gp~~~~ 215 (271)
T cd08978 201 GYATSDSIDGPYVKK 215 (271)
T ss_pred EEEECCCCCCCcCcC
Confidence 788888764 46554
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.4e-07 Score=89.63 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=79.3
Q ss_pred CCCeEeecEEEccCCe--EEEEEeeccCCCce-eEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEec
Q 014058 125 INSCWSGSVTILPGDK--PFILYTGIDASGQQ-VQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA 201 (431)
Q Consensus 125 ~~gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~ 201 (431)
...+|-+.|++. +|+ ++++|.+....... .+++|.|+|+ .+|++. .+||+.+...++.....||-|+..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 457999999865 555 89988876654444 8999999997 689886 479997655566677899998765
Q ss_pred CCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccc
Q 014058 202 PDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHP 237 (431)
Q Consensus 202 ~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 237 (431)
+++|||++.+......++.+.+|+|+++|+..+..
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~ 135 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKI 135 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECT
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEeccc
Confidence 68999999887765667889999999999998753
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.2e-06 Score=80.41 Aligned_cols=157 Identities=13% Similarity=0.102 Sum_probs=99.9
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeCCCcc-ceecc-cccCCCC--ccCCCCeEeecEEEccCC
Q 014058 65 NWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN-WIHLS-HALCPSG--PYDINSCWSGSVTILPGD 139 (431)
Q Consensus 65 gw~NDPnG~i~~~-G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~-W~~~~-~aL~P~~--~~D~~gv~SGsav~~~dg 139 (431)
+-+..|. +++.+ |+|+|||..... ..+ ....+.|+|+|+.. |++.. ..+.+.. ..+...+..++++.++||
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~-~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG 133 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKN-QQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDG 133 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCC-ceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCC
Confidence 3456777 67777 999999987643 123 56799999999975 56542 1122221 123345678888887669
Q ss_pred eEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC----
Q 014058 140 KPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---- 215 (431)
Q Consensus 140 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~---- 215 (431)
+++|+|.+........+.+|.|+|. .+|++....+++.... ....+.-|.++ + .+|+|||++.+...
T Consensus 134 ~~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~ 204 (286)
T cd08772 134 KWYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVD 204 (286)
T ss_pred CEEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCC
Confidence 9999998764333456788988885 5787653222222211 23467789964 4 47999999987541
Q ss_pred CcceEEEEEeCC-CCCcEEc
Q 014058 216 NEGMAFVYWSWD-FIHWTKL 234 (431)
Q Consensus 216 ~~G~i~ly~S~D-l~~W~~~ 234 (431)
..-.+..++|++ +-.|+..
T Consensus 205 ~~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 205 STYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CCcceEEEEccCCCCCcccC
Confidence 223456677765 3456543
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.1e-06 Score=83.99 Aligned_cols=74 Identities=16% Similarity=0.189 Sum_probs=52.4
Q ss_pred ccCCeEEEecCCCeEEEEEeeeeC---------CcceEEEEEeCCCCCcEEcccccccCC--------------CCCcee
Q 014058 192 FRDPTTAWQAPDGRWRVLVGGQID---------NEGMAFVYWSWDFIHWTKLDHPLYSVQ--------------ETGMWE 248 (431)
Q Consensus 192 ~RDP~Vv~~~~~g~~~M~~ga~~~---------~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------------~~~~wE 248 (431)
+|||+|+ ++.+|.|||+..+... ..+.|.+|+|+||.+|+..+..+.... .....+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999965 4457788888765431 124578999999999998775442211 123456
Q ss_pred eCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 249 CPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
+|+++.++ | +|+|.++..
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~ 98 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMN 98 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEcc
Confidence 99999987 6 888888764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.34 E-value=7.4e-06 Score=81.18 Aligned_cols=77 Identities=14% Similarity=0.137 Sum_probs=55.6
Q ss_pred CCccCCeEEEecCCCeEEEEEeeeeCC----cceEEEEEeCCCCCcEEcccccccCC---CCCceeeCcEEEeccCCccc
Q 014058 190 DMFRDPTTAWQAPDGRWRVLVGGQIDN----EGMAFVYWSWDFIHWTKLDHPLYSVQ---ETGMWECPDIFPVSINGTIG 262 (431)
Q Consensus 190 ~~~RDP~Vv~~~~~g~~~M~~ga~~~~----~G~i~ly~S~Dl~~W~~~~~~l~~~~---~~~~wECPdlf~l~~~g~~~ 262 (431)
..+|||+|++.+++|.|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 468999987765689999998765321 12368999999999998875443221 12357899999886 5
Q ss_pred eecccCCCCeeeEEEEeeC
Q 014058 263 VDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 263 ~~~~~~~~~~k~vl~~s~~ 281 (431)
+|+|.++..
T Consensus 79 ----------~yyly~s~~ 87 (291)
T cd08981 79 ----------RYYMFATFH 87 (291)
T ss_pred ----------EEEEEEEec
Confidence 888887764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.6e-05 Score=78.35 Aligned_cols=78 Identities=18% Similarity=0.372 Sum_probs=56.0
Q ss_pred CCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 177 ~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
.||||. ..+.||.|++. +++|||+.++.. ..+.+.+|+|+||.+|+..+..+. ...+++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~~--~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILRD--GEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEEE--CCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEEEC
Confidence 478884 24579997643 789999765422 223478999999999998875443 2345688 89999986
Q ss_pred cCCccceecccCCCCeeeEEEEeeC
Q 014058 257 INGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 257 ~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
| ||+|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 6 788887764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.1e-05 Score=75.45 Aligned_cols=154 Identities=14% Similarity=0.138 Sum_probs=92.9
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCC--ccceecccccCCCCccCCCCeEeecEEEccCCeE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dl--v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
.+-+..|. +++.+|+|||||..+..+. + ....++|+|+|+ -.|+..++++.+........+..++++.++||++
T Consensus 55 ~~~~wAP~-v~~~~g~yyl~ys~~~~~~--~-~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~ 130 (288)
T cd08998 55 SGNLWAPD-VIYLNGKYYLYYSVSTFGS--N-RSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKL 130 (288)
T ss_pred CCCccCCe-EEEECCEEEEEEEEEeCCC--C-ceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCE
Confidence 34466777 7789999999998764321 2 567899999999 7999987666554322233566888888778999
Q ss_pred EEEEeeccCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-C---C
Q 014058 142 FILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-D---N 216 (431)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-~---~ 216 (431)
+|+|.+... .+.++ .+.|.+.+ ..+... ...++..+. ...-...|++ ++ .+|+|||++++.. . .
T Consensus 131 Yl~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~ 199 (288)
T cd08998 131 WLSFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGED 199 (288)
T ss_pred EEEeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCC
Confidence 999975321 12223 33332211 122110 011222221 1123568985 45 4899999987532 1 1
Q ss_pred cc-eEEEEEeCCCC-CcE
Q 014058 217 EG-MAFVYWSWDFI-HWT 232 (431)
Q Consensus 217 ~G-~i~ly~S~Dl~-~W~ 232 (431)
.+ ++.+++|+++. -|+
T Consensus 200 ~~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 200 STYNIRVGRSKSITGPYV 217 (288)
T ss_pred CceEEEEEEcCCCCCCcC
Confidence 12 57789998864 465
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.3e-05 Score=79.19 Aligned_cols=129 Identities=18% Similarity=0.169 Sum_probs=85.9
Q ss_pred ceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeC-CCccceeccc--ccCCCCccCCCCeEeecEEEccCCeEEEEEeec
Q 014058 73 PMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSY-DLINWIHLSH--ALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (431)
Q Consensus 73 ~i~~~-G~YHlFyq~~P~~~~wg~~~~WgHa~S~-Dlv~W~~~~~--aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 148 (431)
++.++ |+|+|||..+......+ ....++|+|+ |+++|++.+. .+.|. ..+..+.-.+.++.+ +|+++|+|++.
T Consensus 68 av~~~~g~~~~~YTg~~~~~~~~-~~~~~lA~S~ddg~~w~k~~~~~~~~~~-~~~~~~~RDP~V~~~-~g~~~m~~g~~ 144 (298)
T cd08996 68 AVVDDNGKLVLFYTGNVKLDGGR-RQTQCLAYSTDDGRTFTKYEGNPVIPPP-DGYTTHFRDPKVFWH-DGKWYMVLGAG 144 (298)
T ss_pred EEEcCCCcEEEEEeceeCCCCCc-eEEEEEEEEcCCCCEEEECCCCceEcCC-CCCCCcccCCeEEeE-CCEEEEEEEEE
Confidence 34566 99999998754321112 5678999999 8999998753 23211 223345567777764 79999999987
Q ss_pred cCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCC--CeEEEEEeeee
Q 014058 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD--GRWRVLVGGQI 214 (431)
Q Consensus 149 ~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~--g~~~M~~ga~~ 214 (431)
..+....+.++.|+|. ++|++. .++.... +.....+.-|.+ ++ .+ ++|+|+++...
T Consensus 145 ~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~-~~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 145 TEDGTGRILLYRSDDL-----KNWEYL--GELLTSL-GDFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred ecCCCcEEEEEECCCC-----CCCEEc--ceecccC-CCccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 5444566778888885 799875 3443211 112346788985 44 46 99999998764
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.8e-05 Score=77.53 Aligned_cols=78 Identities=22% Similarity=0.353 Sum_probs=55.2
Q ss_pred CcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccC---------CCCCcee
Q 014058 178 NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV---------QETGMWE 248 (431)
Q Consensus 178 ~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~---------~~~~~wE 248 (431)
||||. ..+.||.|+.. ++.|||+.+......| +.+|+|+||.+|+..+..+... ..+++|
T Consensus 1 NPvi~-------~~~~DP~ii~~--~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIRA--GDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEEE--CCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 57763 35679997644 7899999865432233 6799999999999987644321 123466
Q ss_pred eCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 249 CPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
+|+++..+ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999987 6 788877764
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.8e-05 Score=79.21 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=81.6
Q ss_pred ceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecc-cccCCCCccCCCCeEeecEEEccCCeEEEEEeeccCC
Q 014058 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS 151 (431)
Q Consensus 73 ~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~ 151 (431)
++..+|++||||..+.....+.....-.+|+|+|+.+|++.+ ++|.+.......+.-.+.++. .+|+++|++.+....
T Consensus 91 av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~~~~~ 169 (445)
T TIGR01322 91 AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGAQTET 169 (445)
T ss_pred EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEEecCC
Confidence 345799999999976432223212335689999999999986 456543221112334566654 589999999775433
Q ss_pred CceeEEEEEecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 152 ~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~---~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
......+..|+|. ++|+.. .++..+.. +.....+.-|-+ +. .+++|+|+++..
T Consensus 170 ~~g~i~ly~S~Dl-----~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 170 EKGSILLYRSKDL-----KNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS-LDGQDVLLFSPQ 225 (445)
T ss_pred CceEEEEEECCCc-----ccCeEe--cccccccccccCCccceEECCeE-EE-ECCcEEEEEecc
Confidence 3334456677764 899975 34543220 111235778874 44 578999999754
|
|
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00033 Score=68.50 Aligned_cols=142 Identities=9% Similarity=0.054 Sum_probs=86.3
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-ccee-cc-cccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIH-LS-HALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~-~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
+.-|. +++.+|+|+|||..+ ...++|+|+|.. .|+. .+ +.+.+.. .......++++.++||+++|
T Consensus 66 ~wAP~-v~~~~g~yy~yys~~---------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl 133 (275)
T cd09004 66 AWAPS-VIERNGKYYFYFSAN---------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYL 133 (275)
T ss_pred cCCCe-EEEECCEEEEEEEcC---------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEE
Confidence 44566 788999999999853 347899999975 7887 33 3343321 12345678888877899999
Q ss_pred EEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC--CcceEE
Q 014058 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMAF 221 (431)
Q Consensus 144 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~--~~G~i~ 221 (431)
+|.+.. .......+.|. .+|+.. ..++.... ...+.-|.+ ++ .+|+|||++.+... ..-++.
T Consensus 134 ~~~~~~----~~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 134 YWGGWG----HCNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEcCcC----CEEEEEECCCc-----ccccCc--ceeeeccC---CCceecceE-EE-ECCEEEEEEECCCCCCCCceEE
Confidence 997531 11112344443 455432 11221111 124567885 45 48999999887542 122566
Q ss_pred EEEeCCCC-CcEEccc
Q 014058 222 VYWSWDFI-HWTKLDH 236 (431)
Q Consensus 222 ly~S~Dl~-~W~~~~~ 236 (431)
.++|++.. -|+....
T Consensus 198 ya~s~~~~GP~~~~~~ 213 (275)
T cd09004 198 YAMADSPLGPFERPGN 213 (275)
T ss_pred EEEcCCCCCCcccCCc
Confidence 77887764 4876543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.97 E-value=8.7e-05 Score=72.66 Aligned_cols=103 Identities=17% Similarity=0.246 Sum_probs=78.4
Q ss_pred CeEeecEEEccCCeEEEEEeec-----cCCCceeEEEEEecCCCCCccce-eeeecCCcEEcC-CCCCCCCCccCCeEEE
Q 014058 127 SCWSGSVTILPGDKPFILYTGI-----DASGQQVQNLAMPENLSDPLLKD-WVKFSGNPVMTP-PNGVKDDMFRDPTTAW 199 (431)
Q Consensus 127 gv~SGsav~~~dg~~~l~YTg~-----~~~~~~~q~lA~S~D~~d~~l~~-w~k~~~~Pvi~~-p~~~~~~~~RDP~Vv~ 199 (431)
.+|-++++. .+++++++|-.. .........+|.|+|+ .+ |++. .+|++.+ ....+.....||-|+.
T Consensus 30 ~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e-~ep~~~P~~~~~e~~G~EDPRvt~ 102 (314)
T COG2152 30 SVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIE-PEPTLWPANYPYEIYGIEDPRVTK 102 (314)
T ss_pred EEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecC-CcceEecCCCchhhhcccCceEEE
Confidence 689998877 499999998762 2235567789999997 34 8876 4788866 3334566789999754
Q ss_pred ecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEccccc
Q 014058 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (431)
Q Consensus 200 ~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 238 (431)
.+++|+|.+.+..+...+..+..++|+.+|++.+.++
T Consensus 103 --I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 103 --IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred --ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 4799999999976555567788999999999987644
|
|
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00083 Score=65.64 Aligned_cols=145 Identities=14% Similarity=0.202 Sum_probs=88.8
Q ss_pred CccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 66 WINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 66 w~NDPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
.+.-|. ++|. +|+|||||...... .+ ....|+|+|++.. .|+.++..+ |. ......+++++++||+.+
T Consensus 64 ~~waP~-v~y~~~~g~Y~m~~~~~~~~--~~-~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Y 134 (265)
T cd08985 64 IIERPK-VIYNAKTGKYVMWMHIDSSD--YS-DARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAY 134 (265)
T ss_pred EEECCe-EEEeCCCCEEEEEEEeCCCC--Cc-ceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEE
Confidence 344555 5664 59999999986422 23 6789999999875 688766433 21 123466888888899999
Q ss_pred EEEeeccCCCceeEEEEEe-cCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-CcceE
Q 014058 143 ILYTGIDASGQQVQNLAMP-ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMA 220 (431)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S-~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-~~G~i 220 (431)
|+|.+.. .....++.- .|. ..+. +.+.... .......|.+ ++ .+|.|||+...... ....+
T Consensus 135 l~~~~~~---~~~i~i~~L~~d~-----~~~~---~~~~~~~----~~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~~~ 197 (265)
T cd08985 135 LLYSDRD---NSDLYIYRLTDDY-----LSVT---GEVTTVF----VGAGREAPAI-FK-RNGKYYLLTSGLTGWNPNDA 197 (265)
T ss_pred EEEecCC---CCceEEEEeCCCc-----cccc---ceEEEcc----CCCccccceE-EE-ECCEEEEEEccCCCccCCce
Confidence 9998642 123344432 222 2332 2333211 1235678984 56 58999999876431 11245
Q ss_pred EEEEeCCCC-CcEEccc
Q 014058 221 FVYWSWDFI-HWTKLDH 236 (431)
Q Consensus 221 ~ly~S~Dl~-~W~~~~~ 236 (431)
..++|+++. .|+..+.
T Consensus 198 ~y~~s~s~~GP~~~~~~ 214 (265)
T cd08985 198 RYATATSILGPWTDLGN 214 (265)
T ss_pred EEEEecCCCCCccccCc
Confidence 677887764 5776654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00038 Score=70.58 Aligned_cols=149 Identities=17% Similarity=0.204 Sum_probs=91.8
Q ss_pred ECCEEEEEEEECCCCCCC--CCcceEEEEEeCCC----ccceecccccCCCCc-cC-------------CCCeEeecEEE
Q 014058 76 YKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDL----INWIHLSHALCPSGP-YD-------------INSCWSGSVTI 135 (431)
Q Consensus 76 ~~G~YHlFyq~~P~~~~w--g~~~~WgHa~S~Dl----v~W~~~~~aL~P~~~-~D-------------~~gv~SGsav~ 135 (431)
.+|+|||||..+-..... ......++++|+|+ ..|+.+...+.+++. |+ ....-.+.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 359999999987321111 11467999999998 455555555556542 21 11233556666
Q ss_pred cc-CCeEEEEEeeccCCC---------------------------ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCC
Q 014058 136 LP-GDKPFILYTGIDASG---------------------------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (431)
Q Consensus 136 ~~-dg~~~l~YTg~~~~~---------------------------~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~ 187 (431)
++ +|+.+|+++++.... .-.+++|++++. .+.+|+-. .|++.+.. .
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~~-v 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEANG-V 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCCC-c
Confidence 54 588999999875421 124567877643 25789865 57876432 1
Q ss_pred CCCCccCCeEEEecCCCeEEEEEeeeeC-------CcceEEEEEeCCCC-CcEE
Q 014058 188 KDDMFRDPTTAWQAPDGRWRVLVGGQID-------NEGMAFVYWSWDFI-HWTK 233 (431)
Q Consensus 188 ~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-------~~G~i~ly~S~Dl~-~W~~ 233 (431)
..++.+|.++ + .+|+|||+..++.. +...+..|.|+++. .|+.
T Consensus 234 -~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 2458899954 4 48999999875542 11235567888874 4554
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0008 Score=66.16 Aligned_cols=151 Identities=10% Similarity=0.144 Sum_probs=85.9
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-c-----ceecccccCCCCccCCCCeEeecEEEccCC
Q 014058 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-N-----WIHLSHALCPSGPYDINSCWSGSVTILPGD 139 (431)
Q Consensus 66 w~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~-----W~~~~~aL~P~~~~D~~gv~SGsav~~~dg 139 (431)
-+.-|. +++++|+|||||.....+. . ...+|.|+|++.. - |+..++.+.+... +......+++++++||
T Consensus 56 ~~WAP~-v~~~~G~yylyys~~~~~~--~-~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG 130 (279)
T cd08988 56 HLWAPD-IYQHNGKFYLYYSVSAFGS--N-TSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHG 130 (279)
T ss_pred CEecce-EEEECCEEEEEEEeccCCC--C-CceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCC
Confidence 355676 7889999999998765432 1 4578999999864 3 5443343433322 1234567889998889
Q ss_pred eEEEEEeeccCCCceeEEEEEecCCCCCccceeeee-cCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee----
Q 014058 140 KPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF-SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI---- 214 (431)
Q Consensus 140 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~-~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~---- 214 (431)
+.+|+|.... .. ....-.+.|... .... ....++..+. +.....-|++ ++ .+|+|||++++..
T Consensus 131 ~~Yl~~g~~~-~g--i~~~eL~~d~~~-----~~~~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~ 198 (279)
T cd08988 131 QPWLSFGSFW-GG--IKLFELDKDTMK-----PAEPGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRG 198 (279)
T ss_pred CEEEEecccC-CC--EEEEEECcccCC-----ccCCCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCC
Confidence 9999996432 11 122233444321 1000 0011222211 1124567884 55 4899999886532
Q ss_pred -CCcceEEEEEeCCCC-CcEE
Q 014058 215 -DNEGMAFVYWSWDFI-HWTK 233 (431)
Q Consensus 215 -~~~G~i~ly~S~Dl~-~W~~ 233 (431)
+..-.+.+++|+++. -|+.
T Consensus 199 ~~~~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 199 GDSTYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CCCCeEEEEEEeCCCCCCCCC
Confidence 112257788998874 3443
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00028 Score=74.18 Aligned_cols=166 Identities=19% Similarity=0.287 Sum_probs=93.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc-------CCCCeEeecEEEccCCe
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGDK 140 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~-------D~~gv~SGsav~~~dg~ 140 (431)
-||. +|.....|++=-. -+ .|= + .-.-+.|+||+||+.....|.+...+ +..|||.+++. .+||+
T Consensus 31 PDpS-i~rvg~dyYia~s--tF--~~f-p-Gl~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGk 102 (549)
T COG3507 31 PDPS-IVRVGDDYYIATS--TF--EWF-P-GLAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGK 102 (549)
T ss_pred CCCc-eEecCCceEEEcc--eE--EEc-C-ceeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCc
Confidence 4776 6666666665321 00 110 1 13457899999999998766665422 35689999986 68999
Q ss_pred EEEEEeeccCCC---ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC-
Q 014058 141 PFILYTGIDASG---QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN- 216 (431)
Q Consensus 141 ~~l~YTg~~~~~---~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~- 216 (431)
++|+||...... ....+..++.+..+ ..|.. |+..+. ..--||.++ +++||+-||+.+....+
T Consensus 103 fwl~ytdvk~~~g~~k~~~nyl~t~~s~~---G~WsD----pi~l~~-----~~~iDPslf-~D~dGr~wlv~~~w~~~~ 169 (549)
T COG3507 103 FWLYYTDVKRSGGPYKNAGNYLVTAESID---GPWSD----PIKLNG-----SNAIDPSLF-FDKDGRKWLVNGSWDGGI 169 (549)
T ss_pred EEEEEecccccCCcccccccEEEEecCCC---CCccc----ceecCC-----cCccCCcee-ecCCCCEEEEecccCCCc
Confidence 999998664321 11122333332221 36753 343221 123499965 55899999999876422
Q ss_pred -----cceEEEEEeC---CCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 217 -----EGMAFVYWSW---DFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 217 -----~G~i~ly~S~---Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
.+.++-..++ -|..+.+ + .+..+......|-|-+++-+
T Consensus 170 ~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~~~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 170 FMHSFAGIILQEYDKTTQKLVGQGY-K-IIFDGGNGGLTEGPHLYKKT 215 (549)
T ss_pred ccccccceeeeeccccccccCCccc-e-eEeccCCCccccCceeeccC
Confidence 1333222221 1222211 1 12333344578999888776
|
|
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0028 Score=63.40 Aligned_cols=148 Identities=11% Similarity=0.125 Sum_probs=85.4
Q ss_pred cCCCcceEEC----CEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceec-cc-ccCCCCc-cC-CCCeEeecEEEccC
Q 014058 68 NDPNGPMYYK----GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHL-SH-ALCPSGP-YD-INSCWSGSVTILPG 138 (431)
Q Consensus 68 NDPnG~i~~~----G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~-~~-aL~P~~~-~D-~~gv~SGsav~~~d 138 (431)
.-|. +++.+ |+|+|||... ....+.|+|++.. .|+++ +. .+.+... .+ ......+++++++|
T Consensus 79 WAP~-v~~~~~~~~gkyylyy~~~--------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdD 149 (311)
T cd09003 79 WAPS-IAVKKINGKGKFYLYFANG--------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDD 149 (311)
T ss_pred CCCc-eEEeccCCCCEEEEEEecC--------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCC
Confidence 3565 67888 9999999531 2458999999965 89975 32 2222111 11 11246788888889
Q ss_pred CeEEEEEeeccC----CCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 139 DKPFILYTGIDA----SGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 139 g~~~l~YTg~~~----~~~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
|+.+|+|.+... ...+.+.+|- +.|. .+ ..+.++....+ ..+.-|.+ ++ .+|+|||++++.
T Consensus 150 G~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~~~Egp~~-~K-~~G~YYL~ys~~ 215 (311)
T cd09003 150 GQGYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----YFFEASGL-HK-INGTYYYSYCTN 215 (311)
T ss_pred CCEEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----CceEeeeE-EE-ECCEEEEEEeCC
Confidence 999999975321 1112334443 3332 22 22233321111 24567884 45 589999998754
Q ss_pred e-------CCcceEEEEEeCCCC-CcEEccccc
Q 014058 214 I-------DNEGMAFVYWSWDFI-HWTKLDHPL 238 (431)
Q Consensus 214 ~-------~~~G~i~ly~S~Dl~-~W~~~~~~l 238 (431)
- ....++..++|++.. .|+..+.++
T Consensus 216 ~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 216 FGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CCccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 1 223456667887654 587655433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00058 Score=66.61 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=100.2
Q ss_pred CCcccceeeecCCCCccCCCcceEEC-CEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecc-cccCCCCccCCCCeE
Q 014058 52 QPYLTSYHFRPPQNWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCW 129 (431)
Q Consensus 52 ~~~Rp~~H~~p~~gw~NDPnG~i~~~-G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~-~aL~P~~~~D~~gv~ 129 (431)
.+|+..-.+.......-||. ++.++ |+++|+|-..... ... ..-+....+.|..++...+ ..+.+.......++.
T Consensus 104 Gp~~~~~~~~~~~~~~iD~~-vf~d~dG~~Yl~~~~~~~~-~~~-~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~ 180 (286)
T PF04616_consen 104 GPWTDPGKIPIPGGNSIDPS-VFVDDDGKYYLYYGSWDNG-DPG-GGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVV 180 (286)
T ss_dssp S-EEEEEEEEEESSSSSSEE-EEEETTSEEEEEEEESTTT-SSE-EEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBE
T ss_pred cccccccceeeccccccCce-EEEecCCCcEEeCcccCCC-ccc-eeEEeecccCccccccCcccccccccccccCCccc
Confidence 57777666655577778999 66665 9999999875443 112 3456666788998888776 444444323345677
Q ss_pred eecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCCCCCccCCeEEEecCCCeEEE
Q 014058 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKDDMFRDPTTAWQAPDGRWRV 208 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p-~~~~~~~~RDP~Vv~~~~~g~~~M 208 (431)
-|+.++..+|.++|+|++..........+|.|++.. ..|+..+.+|++... .......-.-.. ++...+|+|+|
T Consensus 181 Egp~~~k~~g~yYl~~s~~~~~~~y~v~~~~s~~~~----gp~~~~~~~~~~~~~~~~~~~~g~gH~~-~~~~~~g~~~~ 255 (286)
T PF04616_consen 181 EGPFVFKHGGKYYLFYSAGGTGSPYQVGYARSDSPL----GPWEWKKGNPILFSRDGENGVYGPGHGS-VFKDPDGRWYI 255 (286)
T ss_dssp EEEEEEEETTEEEEEEEESGSSTTTEEEEEEESSTT----SGGEETTTCBCEGTTBTTSSCEEEEEEE-EEEETTSEEEE
T ss_pred cceEEEEcCCCEEEEEeccCCCCCceEEEeeccCCC----CceeeccCCeEEEeeccCCccccCccCC-EEECCCCCEEE
Confidence 788887789999999997654444667789998874 456665567777531 111111222233 44657888988
Q ss_pred EEeeee
Q 014058 209 LVGGQI 214 (431)
Q Consensus 209 ~~ga~~ 214 (431)
++-+..
T Consensus 256 ~yh~~~ 261 (286)
T PF04616_consen 256 VYHARN 261 (286)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 886554
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00033 Score=73.41 Aligned_cols=132 Identities=17% Similarity=0.214 Sum_probs=80.7
Q ss_pred ceEECCEEEEEEEECC-CCC--CCCCcceEEEEEeCCCccceec--ccccCCCCccCCCCeEeecEEEccCCeEEEEEee
Q 014058 73 PMYYKGVYHLFYQYNP-LGP--LFGDKMIWAHSVSYDLINWIHL--SHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (431)
Q Consensus 73 ~i~~~G~YHlFyq~~P-~~~--~wg~~~~WgHa~S~Dlv~W~~~--~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 147 (431)
++..+|+|||||.-+- ..+ .......-.+|+|+|+++|++. .++|.+...+.....-.+.++..++|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 4456888999998752 111 1120122367899999999997 3666554322222334566655434689999887
Q ss_pred ccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCC-----eEEEEEeee
Q 014058 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG-----RWRVLVGGQ 213 (431)
Q Consensus 148 ~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g-----~~~M~~ga~ 213 (431)
...+..-.+.++.|+|. ++|+.. .++.....+.....|.-|-+ +. .++ +|+|+++..
T Consensus 154 ~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wECPdl-f~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWECPDL-FP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEECCcE-EE-eCCCCCceeEEEEECcC
Confidence 65444555778888774 899874 34543211111246778874 33 345 899999775
|
|
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0017 Score=63.52 Aligned_cols=134 Identities=10% Similarity=0.072 Sum_probs=80.5
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEEEEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (431)
+.-|. +++.+|+|||||..+. ...+.|+|++.. .|++.+... ....+++++++||+.+|+|
T Consensus 76 ~WAP~-v~~~~gkyy~yys~~~--------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~ 137 (269)
T cd09001 76 QWAPS-LRYHNGTFYVFFCTNT--------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVY 137 (269)
T ss_pred EECCc-eEEECCEEEEEEEecC--------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEe
Confidence 45676 7889999999998751 124667777754 787765322 2345788888899999998
Q ss_pred eeccCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEE
Q 014058 146 TGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224 (431)
Q Consensus 146 Tg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~ 224 (431)
.+. .+.++ .+.|. ..... ....++..+.. ......-|++ ++ .+|+|||++.+.......+.+++
T Consensus 138 ~~~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~ 202 (269)
T cd09001 138 GGG------TIRLVELSPDL-----TGVGG-KDQVIIDAGEE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLR 202 (269)
T ss_pred CCC------cEEEEEECccc-----CCcCC-CceEEEeCCCc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEE
Confidence 643 23333 34443 22211 11223333211 1234567885 45 58999999986532223556789
Q ss_pred eCCCC-CcEE
Q 014058 225 SWDFI-HWTK 233 (431)
Q Consensus 225 S~Dl~-~W~~ 233 (431)
|+++. -|+.
T Consensus 203 s~~~~GP~~~ 212 (269)
T cd09001 203 SKSLTGPYES 212 (269)
T ss_pred eCCCCCCcCC
Confidence 98864 3554
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0043 Score=59.07 Aligned_cols=185 Identities=16% Similarity=0.259 Sum_probs=102.2
Q ss_pred ecCCCCc--cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEE-cc
Q 014058 61 RPPQNWI--NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTI-LP 137 (431)
Q Consensus 61 ~p~~gw~--NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~-~~ 137 (431)
.|..||. .||- .++++|+||+|....-.+..|+ .| .=..+-+|.+...| +..-.+. +.-.+.++. .+
T Consensus 17 ~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~-sm-----~f~~Ftdws~~~sA--~q~~m~~-~~vAP~vFYFaP 86 (271)
T PF03664_consen 17 QPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYG-SM-----NFGPFTDWSQMASA--SQNYMDQ-SAVAPQVFYFAP 86 (271)
T ss_pred cCCCCceeccCce-EEeECCEEEEEEEeccCCCccc-eE-----eeeccCCHHHhhcc--ccccCCc-ccccceEEEecC
Confidence 4667885 6999 8899999999998764444444 33 33345577776543 2211121 222333332 25
Q ss_pred CCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCc
Q 014058 138 GDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (431)
Q Consensus 138 dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~ 217 (431)
.+.++|.|.-.. ..-...+++|.+++ ..|... .|++...........-|..||-+ +..-||+.+.. .
T Consensus 87 k~~W~L~yQwg~----~~fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~D---n 153 (271)
T PF03664_consen 87 KNIWYLAYQWGP----AAFSYSTSSDPTNP--NGWSAP--QPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAGD---N 153 (271)
T ss_pred CcEEEEEEecCC----CcceeecCCCCCCC--ccCCCC--cccccccccCCCCCceeeEEEec--CCceEEEEcCC---C
Confidence 788899886321 11123456677665 468863 46653211111234579888754 33445555443 2
Q ss_pred ceEEEEEeCC-CCCc----EEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCC
Q 014058 218 GMAFVYWSWD-FIHW----TKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD 283 (431)
Q Consensus 218 G~i~ly~S~D-l~~W----~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~ 283 (431)
|. ||+|.- +-+. .-....+.+.......|.++++++. | ..++.|++-..+.
T Consensus 154 Gk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G-----------~~~YLmiVEaiGs 209 (271)
T PF03664_consen 154 GK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--G-----------QNQYLMIVEAIGS 209 (271)
T ss_pred Cc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--C-----------CceEEEEEEEecC
Confidence 53 788742 2222 1001112222345579999999997 5 2377887766443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0059 Score=60.10 Aligned_cols=130 Identities=14% Similarity=0.192 Sum_probs=72.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCC----CccceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD----LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~D----lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
+.-|. +++.+|+|||||...-.+.. . ....+.++|++ +-.|+..+..+.+.. .....++++.+ +|+.+
T Consensus 55 ~WAP~-i~~~~g~yylyys~~~~~~~-~-~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~d-dG~~Y 126 (288)
T cd08980 55 LWAPE-LHYIDGKWYIYFAAGDGGGN-A-NHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFEH-NGQLY 126 (288)
T ss_pred EECce-EEEECCEEEEEEEccCCCCC-c-ceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEEE-CCEEE
Confidence 44555 67889999999986532111 1 34456666664 568998765442221 23467787775 79999
Q ss_pred EEEeeccC--CCceeEEEEEecCCCCCccceeeeecCCcE-EcCC-CCCCC---CCccCCeEEEecCCCeEEEEEeeee
Q 014058 143 ILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPV-MTPP-NGVKD---DMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 143 l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pv-i~~p-~~~~~---~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|+|.+... ...+.+.++...+. .++. +.++ +..+ ..++. .-..-|+++ + .+|.|||++++..
T Consensus 127 l~~~~~~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~~-k-~~G~yYl~yS~~~ 195 (288)
T cd08980 127 FVWSGWEGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAAL-K-RNGKVFLTYSASG 195 (288)
T ss_pred EEEEccCCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEEE-E-ECCEEEEEEECCC
Confidence 99986432 12233334433332 1232 2232 2222 12221 124578754 4 3799999998754
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0019 Score=62.63 Aligned_cols=149 Identities=19% Similarity=0.216 Sum_probs=88.9
Q ss_pred CccCCCcceE-ECCEEEEEEEECCCCCCCCCcceEEEEEeCC-CccceecccccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 66 WINDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 66 w~NDPnG~i~-~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
=..||. +++ .+|+.||||........|. .....+.+|+| ..+|+.... |.+.......+...+.++...+|++++
T Consensus 47 ~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~-~~~~~~~~S~D~G~TWs~~~~-l~~~~~~~~~~~~~~~~i~~~~G~l~~ 123 (275)
T PF13088_consen 47 RYGNPS-LVVDPDGRLWLFYSAGSSGGGWS-GSRIYYSRSTDGGKTWSEPTD-LPPGWFGNFSGPGRGPPIQLPDGRLIA 123 (275)
T ss_dssp EEEEEE-EEEETTSEEEEEEEEEETTESCC-TCEEEEEEESSTTSS-EEEEE-EHHHCCCSCEECSEEEEEEECTTEEEE
T ss_pred cccCcE-EEEeCCCCEEEEEEEccCCCCCC-ceeEEEEEECCCCCCCCCccc-cccccccceeccceeeeeEecCCCEEE
Confidence 346787 555 4999999996665554454 45555599998 799998652 322211222344455556667898777
Q ss_pred E-EeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 144 L-YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 144 ~-YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
- |.. . .......+.+|.|++ ++|+... ++.. ....--|.++.. .+|+.+|++-.. ..+.+.+
T Consensus 124 ~~~~~-~-~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~~~-~dG~l~~~~R~~--~~~~~~~ 186 (275)
T PF13088_consen 124 PYYHE-S-GGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIVEL-PDGRLLAVFRTE--GNDDIYI 186 (275)
T ss_dssp EEEEE-S-SCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEEEE-TTSEEEEEEEEC--SSTEEEE
T ss_pred EEeec-c-ccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEEEEC-CCCcEEEEEEcc--CCCcEEE
Confidence 5 443 1 244666778899986 7998752 2210 112234554333 678888877553 2236677
Q ss_pred EEeCC-CCCcEEc
Q 014058 223 YWSWD-FIHWTKL 234 (431)
Q Consensus 223 y~S~D-l~~W~~~ 234 (431)
++|.| +.+|+..
T Consensus 187 ~~S~D~G~TWs~~ 199 (275)
T PF13088_consen 187 SRSTDGGRTWSPP 199 (275)
T ss_dssp EEESSTTSS-EEE
T ss_pred EEECCCCCcCCCc
Confidence 88877 6899863
|
... |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.012 Score=57.99 Aligned_cols=146 Identities=15% Similarity=0.065 Sum_probs=85.6
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCC-ccceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dl-v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
.+-+.-|. +++.+|+|||||...... + ....+.++|+|. -.|++.. +.+. .+..++++.++||+.+
T Consensus 65 ~~~~WAP~-v~~~~g~yy~yy~~~~~~--~--~~~~~v~~s~~p~gpw~~~~--~~~~------~~iDp~vf~d~dG~~Y 131 (288)
T cd09000 65 SGGIWAPT-IRYHDGTFYLITTNVDGM--K--DGGNFIVTADDPAGPWSDPV--WLDS------GGIDPSLFFDDDGKVY 131 (288)
T ss_pred CCceEcce-EEEECCEEEEEEEecCCC--C--CCceEEEEeCCCCCCCcCCE--ecCC------CccCCceeEcCCCCEE
Confidence 33455677 788999999999876532 2 345678899988 3787422 2222 3456888887789999
Q ss_pred EEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCc--EEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-
Q 014058 143 ILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNP--VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID- 215 (431)
Q Consensus 143 l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~P--vi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~- 215 (431)
|+|...... ....+.++-.+. ..++-. +.+ +..... .....-|.+ ++ .+|+|||++.....
T Consensus 132 ~~~~~~~~~~~~~~~~~i~~~~l~~------~~~~~~-~~~~~~~~~~~---~~~~Egp~v-~k-~~g~YYl~ys~~~~~ 199 (288)
T cd09000 132 LVGNGWDERRGYNGHGGIWLQEIDL------ETGKLL-GEPKVIWNGTG---GRWPEGPHL-YK-RDGWYYLLIAEGGTG 199 (288)
T ss_pred EEecccCCccccCCCCcEEEEEEcc------ccCCCC-CCcEEEEeCCC---CCCcccCeE-EE-ECCEEEEEEecCCCC
Confidence 988653211 123344443221 112211 122 222111 123457885 45 58999999865432
Q ss_pred CcceEEEEEeCCCC-CcEEc
Q 014058 216 NEGMAFVYWSWDFI-HWTKL 234 (431)
Q Consensus 216 ~~G~i~ly~S~Dl~-~W~~~ 234 (431)
..-.+.+++|+++. .|+..
T Consensus 200 ~~~~v~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 200 YGHSVTVARSRSITGPYEPA 219 (288)
T ss_pred CCeEEEEEEeCCCCCCCccC
Confidence 22357789999886 67653
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.021 Score=57.55 Aligned_cols=166 Identities=19% Similarity=0.201 Sum_probs=99.1
Q ss_pred CCCcccceeeecCC---CCccCCCcceEEC-CEEEEEEEECCCCC-------CCCCcceEEEEEeCCC-ccceecccccC
Q 014058 51 NQPYLTSYHFRPPQ---NWINDPNGPMYYK-GVYHLFYQYNPLGP-------LFGDKMIWAHSVSYDL-INWIHLSHALC 118 (431)
Q Consensus 51 ~~~~Rp~~H~~p~~---gw~NDPnG~i~~~-G~YHlFyq~~P~~~-------~wg~~~~WgHa~S~Dl-v~W~~~~~aL~ 118 (431)
...|.+.--+.... ..+.||. ++... |+-+|||...+... .+. ..+..+..|+|. .+|... ..|.
T Consensus 57 G~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~S~D~G~tW~~p-~~l~ 133 (351)
T cd00260 57 GKTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPS-NAYLVLVYSDDDGITWSSP-RDLT 133 (351)
T ss_pred CCcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCC-ceEEEEEEEEcCCceecCC-ccCC
Confidence 35676654344332 3567898 67776 99999998877642 123 456778888876 899863 3333
Q ss_pred CCCc-cCCCCeE--eecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCC
Q 014058 119 PSGP-YDINSCW--SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDP 195 (431)
Q Consensus 119 P~~~-~D~~gv~--SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP 195 (431)
+... .+....+ .|+.++..+|++++.+.+....+.....+.+|+|.+ ++|+... +. . + ......|
T Consensus 134 ~~~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~-~-~----~~~~~e~ 201 (351)
T cd00260 134 PSVKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV-N-D----AGGCSEC 201 (351)
T ss_pred ccccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC-C-C----CCCCcCC
Confidence 3321 1112222 334556668998775544332344556677898875 7997532 11 1 1 1233467
Q ss_pred eEEEecCCCeEEEEEeeeeCCcceEEEEEeCCC-CCcEEc
Q 014058 196 TTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF-IHWTKL 234 (431)
Q Consensus 196 ~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl-~~W~~~ 234 (431)
.++-. .+|+.+|+..... .+...++.|.|. ..|+..
T Consensus 202 ~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 202 SVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred EEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccC
Confidence 75533 4888888765532 456678888775 899864
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.034 Score=54.84 Aligned_cols=144 Identities=15% Similarity=0.216 Sum_probs=80.1
Q ss_pred ccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCc---cceecccccCCCCccCCCCeEeecEEEccCCeE
Q 014058 67 INDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI---NWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 67 ~NDPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv---~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
..-|. ++|+ +++|+|+||+. +...+||+|.. .|....+.+.........+...-.+ +.+|+++
T Consensus 78 fwAPq-Vfyf~pk~kwYL~Yq~~----------~~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~ 145 (303)
T cd08987 78 RVAPQ-VFYFAPQNKWYLIYQWW----------PAAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNC 145 (303)
T ss_pred cccCE-EeeeccCCEEEEEEecC----------ceEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCE
Confidence 34677 7765 59999999962 14689999974 5776655443322222223344444 5679999
Q ss_pred EEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCC--eEEEEEeeeeCCcce
Q 014058 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG--RWRVLVGGQIDNEGM 219 (431)
Q Consensus 142 ~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g--~~~M~~ga~~~~~G~ 219 (431)
+||+.+-+ + .+..|-... .+|-.....++.....+-...-|.-|.| ++ .+| +|+|++-|.....++
T Consensus 146 YLff~~dn--G--~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~r 213 (303)
T cd08987 146 YLFFSDDN--G--KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGR 213 (303)
T ss_pred EEEEecCC--C--eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCC
Confidence 99998743 2 344443222 1222211223331111112256778885 55 355 999999776431221
Q ss_pred -EEEEEeCCC-CCcEEc
Q 014058 220 -AFVYWSWDF-IHWTKL 234 (431)
Q Consensus 220 -i~ly~S~Dl-~~W~~~ 234 (431)
..-++|+.| -.|+..
T Consensus 214 Yfrs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 214 YFRSWTATSLDGPWTPL 230 (303)
T ss_pred eEEEEEcCCCCCCceec
Confidence 122666766 378865
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.034 Score=55.45 Aligned_cols=115 Identities=17% Similarity=0.238 Sum_probs=70.5
Q ss_pred EEEccCCeEEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEE
Q 014058 133 VTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVL 209 (431)
Q Consensus 133 av~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~ 209 (431)
.++..+|+++|||--+... +...-++|+|+|. ++|+..+ ++|.+....+....--..++.. +++++|+
T Consensus 14 G~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~~--~aL~P~~~~d~~g~~SGs~~~~--~~~~~~~ 84 (308)
T PF00251_consen 14 GLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDL-----VHWEHLP--VALPPDEEYDADGCFSGSAVVD--DDNLVLF 84 (308)
T ss_dssp EEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSS-----SSEEEEE--EEE-SSSGGGTTEEEEEEEEEE--TTCEEEE
T ss_pred cCeEeCCEEEEEeccCCCCcccceeEEEEEECCCC-----CCceeCC--ceEcccccCCcCccCcceEEEE--CCEEEEE
Confidence 3444699999999765421 3456789999995 8999863 5665443322222334444433 4578888
Q ss_pred EeeeeCC-cceEEEEEe-CCCCCcEEcc--cccccC---CCCCceeeCcEEEec
Q 014058 210 VGGQIDN-EGMAFVYWS-WDFIHWTKLD--HPLYSV---QETGMWECPDIFPVS 256 (431)
Q Consensus 210 ~ga~~~~-~G~i~ly~S-~Dl~~W~~~~--~~l~~~---~~~~~wECPdlf~l~ 256 (431)
+.+.... .....++.| +|+.+|+... .++... .....+.=|.+|...
T Consensus 85 YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 85 YTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp EEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred EeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 8776532 334556677 8899999854 344331 233467788886555
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.067 Score=51.73 Aligned_cols=161 Identities=16% Similarity=0.099 Sum_probs=85.3
Q ss_pred CEEEEEEEECCCCCCCCCcceEEEEEe--CCC-ccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEeeccCC---
Q 014058 78 GVYHLFYQYNPLGPLFGDKMIWAHSVS--YDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS--- 151 (431)
Q Consensus 78 G~YHlFyq~~P~~~~wg~~~~WgHa~S--~Dl-v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~--- 151 (431)
|+...++.. +...+ .....-..| +|. .+|.....+..+. .....+..++++.+++|+++|+|+.....
T Consensus 1 G~l~a~~~~---~~~~~-~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~ 74 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEG-AIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGW 74 (275)
T ss_dssp SEEEEEEEE---SSCSC-CEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESC
T ss_pred CeEEEEEEC---CcccC-CCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCC
Confidence 556666665 23333 344444555 987 7899865544443 12245667777777799999999544321
Q ss_pred CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEe-CCCCC
Q 014058 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS-WDFIH 230 (431)
Q Consensus 152 ~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S-~Dl~~ 230 (431)
........+|+|+| ++|+... .|...+........+.+- +-. .+|++++..-........+.++.| ++.+.
T Consensus 75 ~~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~t 146 (275)
T PF13088_consen 75 SGSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKT 146 (275)
T ss_dssp CTCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSS
T ss_pred CceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCce
Confidence 12222348899976 7999753 333221111112233332 223 478777763222222344455555 55689
Q ss_pred cEEcccccccCCCCCceeeCcEEEec
Q 014058 231 WTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 231 W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
|+.... .. .....-.|.+++++
T Consensus 147 W~~~~~-~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 147 WSSGSP-IP---DGQGECEPSIVELP 168 (275)
T ss_dssp EEEEEE-CE---CSEEEEEEEEEEET
T ss_pred eecccc-cc---ccCCcceeEEEECC
Confidence 987543 22 11122345666666
|
... |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.039 Score=54.86 Aligned_cols=80 Identities=11% Similarity=0.114 Sum_probs=49.0
Q ss_pred CeEeecEEEccCCeEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCe
Q 014058 127 SCWSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (431)
Q Consensus 127 gv~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~ 205 (431)
++.-|+.+...+|+++|+|++.... ....+.+|+|++.- ..|++...+||+..+.+. ...--... ++.+.+|+
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~----GP~~~~~~~pil~~~~~~-~~g~GH~s-~v~~~~G~ 232 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPL----GPFTYQPHNPFSYKPGGF-ITGAGHGS-TFQDKYGN 232 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCC----CCCCcCCCCccccCCCCe-EecCCccc-EEECCCCC
Confidence 3556777777899999999864322 33457789987764 456766568887543220 01111223 34556788
Q ss_pred EEEEEee
Q 014058 206 WRVLVGG 212 (431)
Q Consensus 206 ~~M~~ga 212 (431)
|++++=+
T Consensus 233 ~~~~yh~ 239 (295)
T cd08982 233 YWHVGTM 239 (295)
T ss_pred EEEEEEE
Confidence 8887633
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=95.48 E-value=2.9 Score=42.01 Aligned_cols=147 Identities=14% Similarity=0.122 Sum_probs=82.1
Q ss_pred cceEEEEEeCCC-ccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEeeccCC----------CceeEEEEEecCC
Q 014058 96 KMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS----------GQQVQNLAMPENL 164 (431)
Q Consensus 96 ~~~WgHa~S~Dl-v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----------~~~~q~lA~S~D~ 164 (431)
.+....++|+|. .+|..... +..... ....+..++.+.+.+|+++|||...... ....+.+..|+|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~~~-i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPSTV-ISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCcccccEE-ehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 355777888875 89998643 333322 2345778888876449999999765421 2345677889887
Q ss_pred CCCccceeeeecCCcEEcCC--CCCCCCCccCCe-EEEecCCCeEEEEEeeeeCC--cceEEEEEeCCCCCcEEcccccc
Q 014058 165 SDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPT-TAWQAPDGRWRVLVGGQIDN--EGMAFVYWSWDFIHWTKLDHPLY 239 (431)
Q Consensus 165 ~d~~l~~w~k~~~~Pvi~~p--~~~~~~~~RDP~-Vv~~~~~g~~~M~~ga~~~~--~G~i~ly~S~Dl~~W~~~~~~l~ 239 (431)
+ .+|.+. ..+.... ..+ ..-++-|- .+-. ++|+++|-+-..... .-..++|..++.+.|+.. ....
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~-~~~~ 193 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQM-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLG-EGVN 193 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEEe-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEEC-CCCC
Confidence 6 799863 2222211 111 11223331 1222 378887766443321 223445555667999863 2221
Q ss_pred cCCCCCceeeCcEEEec
Q 014058 240 SVQETGMWECPDIFPVS 256 (431)
Q Consensus 240 ~~~~~~~wECPdlf~l~ 256 (431)
. ...+.| |.++++.
T Consensus 194 ~--~~~~~e-~~i~el~ 207 (351)
T cd00260 194 D--AGGCSE-CSVVELS 207 (351)
T ss_pred C--CCCCcC-CEEEEec
Confidence 1 133445 7788996
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.65 Score=46.58 Aligned_cols=145 Identities=17% Similarity=0.200 Sum_probs=69.5
Q ss_pred CCCcceEECCEEEEEE-EECCCCCCCCCcceEEEEEeCCC-ccceecccccCCC-CccCCCCeE--eecEEEccCCeEEE
Q 014058 69 DPNGPMYYKGVYHLFY-QYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPS-GPYDINSCW--SGSVTILPGDKPFI 143 (431)
Q Consensus 69 DPnG~i~~~G~YHlFy-q~~P~~~~wg~~~~WgHa~S~Dl-v~W~~~~~aL~P~-~~~D~~gv~--SGsav~~~dg~~~l 143 (431)
.|- .+..++..+|+. .|+... ... ....-++.|+|- +.|.+........ .... ... -||.|+.+||++++
T Consensus 62 rPT-tvvkgn~IymLvG~y~~~~-~~~-~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTLVF 136 (310)
T PF13859_consen 62 RPT-TVVKGNKIYMLVGSYSRSA-GAD-DWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTLVF 136 (310)
T ss_dssp EEE-EEEETTEEEEEEEEESS---SST-TEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-EEE
T ss_pred eee-eeecceeEEEEEEEEeccc-ccc-ccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCEEE
Confidence 444 334466666665 555322 111 222345566654 6898753221111 1101 111 24456667998877
Q ss_pred EEeeccCCCc-eeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 144 LYTGIDASGQ-QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 144 ~YTg~~~~~~-~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
=-.+...+.. ..-.|.+|+|.+ .+|+=..+ ......+||.|+-. ++|+-.|+.... .|+-.+
T Consensus 137 Pv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg---------~s~~gC~~psv~EW-e~gkLlM~~~c~---~g~rrV 199 (310)
T PF13859_consen 137 PVQATKKNGDGTVSLIIYSTDDG----KTWKLSKG---------MSPAGCSDPSVVEW-EDGKLLMMTACD---DGRRRV 199 (310)
T ss_dssp EEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE-T---TS---E
T ss_pred EEeeeccCccceEEEEEEECCCc----cceEeccc---------cCCCCcceEEEEec-cCCeeEEEEecc---cceEEE
Confidence 6666554444 366688999865 68974322 11245689998755 578888876542 244468
Q ss_pred EEeCCC-CCcEEcc
Q 014058 223 YWSWDF-IHWTKLD 235 (431)
Q Consensus 223 y~S~Dl-~~W~~~~ 235 (431)
|+|.|. ..|+..-
T Consensus 200 YeS~DmG~tWtea~ 213 (310)
T PF13859_consen 200 YESGDMGTTWTEAL 213 (310)
T ss_dssp EEESSTTSS-EE-T
T ss_pred EEEcccceehhhcc
Confidence 999886 7899753
|
|
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.66 E-value=2.3 Score=45.38 Aligned_cols=150 Identities=15% Similarity=0.133 Sum_probs=77.1
Q ss_pred cCCCCccCCCcceEECCEEEEEEEECCCCC-CCCCcceEEEEEeCC-CccceecccccCCCCccCCCCeEeecEEEccCC
Q 014058 62 PPQNWINDPNGPMYYKGVYHLFYQYNPLGP-LFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGD 139 (431)
Q Consensus 62 p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~-~wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg 139 (431)
|..|=+.-|. ++|+||+|+|+|.-.+... .|- +++--..+.++ .=.|.+. +.+ +.. +.+..|.+.|+||
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k-~~~nyl~t~~s~~G~WsDp-i~l-~~~-----~~iDPslf~D~dG 156 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYK-NAGNYLVTAESIDGPWSDP-IKL-NGS-----NAIDPSLFFDKDG 156 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCccc-ccccEEEEecCCCCCcccc-eec-CCc-----CccCCceeecCCC
Confidence 4555566777 8899999999995444322 122 22222233233 2356652 212 221 2466889999999
Q ss_pred eEEEEEeeccCC--CceeEEEEEecCCCCCccceeeeecC--CcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-
Q 014058 140 KPFILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSG--NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI- 214 (431)
Q Consensus 140 ~~~l~YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~--~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~- 214 (431)
+.+|+|-+.+.. ....-.+-.+... .+=.|..+ -.++-. +.+..-..-|. +++ ++|-|||+.+...
T Consensus 157 r~wlv~~~w~~~~~~~~~~~i~l~~~~-----~~~~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~ 227 (549)
T COG3507 157 RKWLVNGSWDGGIFMHSFAGIILQEYD-----KTTQKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGL 227 (549)
T ss_pred CEEEEecccCCCcccccccceeeeecc-----ccccccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCC
Confidence 999999887642 1111111112111 00011111 111211 11112334575 566 6888888887654
Q ss_pred CCcc-eEEEEEeCCCC
Q 014058 215 DNEG-MAFVYWSWDFI 229 (431)
Q Consensus 215 ~~~G-~i~ly~S~Dl~ 229 (431)
...| .+.++||+.+.
T Consensus 228 t~~gh~~~vaRSKsid 243 (549)
T COG3507 228 TTYGHAIRVARSKSID 243 (549)
T ss_pred CccceeEEEEeccCCC
Confidence 3334 46788998764
|
|
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=90.25 E-value=11 Score=39.45 Aligned_cols=129 Identities=12% Similarity=0.182 Sum_probs=81.2
Q ss_pred CCEEEEEEEECCCC-CCCCC----cceEEEEEeCC----CccceecccccCCCCccCC-------CCeEeecEEEc-cCC
Q 014058 77 KGVYHLFYQYNPLG-PLFGD----KMIWAHSVSYD----LINWIHLSHALCPSGPYDI-------NSCWSGSVTIL-PGD 139 (431)
Q Consensus 77 ~G~YHlFyq~~P~~-~~wg~----~~~WgHa~S~D----lv~W~~~~~aL~P~~~~D~-------~gv~SGsav~~-~dg 139 (431)
+|+-.|||.....+ ..-.. ...-|++.+.| +-.|+.+.+.+.|++.+-+ ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999884321 10000 23456777777 5578888788888864321 23456777776 589
Q ss_pred eEEEEEeeccCC--------------------------------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCC
Q 014058 140 KPFILYTGIDAS--------------------------------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (431)
Q Consensus 140 ~~~l~YTg~~~~--------------------------------~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~ 187 (431)
+.||+|.|+... ....++||..++.. ...|+-+ .|+|....
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~~-- 295 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSANG-- 295 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEETT--
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceeccc--
Confidence 999999887531 01246788887653 2568876 48886432
Q ss_pred CCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 188 KDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 188 ~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
-.....-|.||++ +|+||++..++.
T Consensus 296 v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 296 VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1234566997766 899999998875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >PF13810 DUF4185: Domain of unknown function (DUF4185) | Back alignment and domain information |
|---|
Probab=87.42 E-value=18 Score=36.44 Aligned_cols=157 Identities=13% Similarity=0.130 Sum_probs=86.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCC----CCCCCCcceEEEEEeCC-CccceecccccCCCCccCCCCe------EeecE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPL----GPLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSC------WSGSV 133 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~----~~~wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv------~SGsa 133 (431)
...-=|.+.|-.+|+-+|.|+..-. ...|. ...=+.+.|+| ..+|+..+..+.+....- .|+ |.=++
T Consensus 92 e~t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~-tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a 169 (316)
T PF13810_consen 92 ETTVIPTDGISVGGRQYLHYMSVRNWGNVPGSWT-TNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAA 169 (316)
T ss_pred ceEEcccceEEECCcEEEEEEEEccCCCCCCccc-cCceEEEEeCCCCCCceeCCCccccccccc-CCcccccccccccc
Confidence 3444588888999999999987521 11233 23457889999 589999986665554111 111 22223
Q ss_pred EEccCCeEEEEEeeccCCCceeEEEEEe-cC-CCCCc------cce--eeeecC--CcEEcCCCCCCCCCccCCeEEEec
Q 014058 134 TILPGDKPFILYTGIDASGQQVQNLAMP-EN-LSDPL------LKD--WVKFSG--NPVMTPPNGVKDDMFRDPTTAWQA 201 (431)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~lA~S-~D-~~d~~------l~~--w~k~~~--~Pvi~~p~~~~~~~~RDP~Vv~~~ 201 (431)
....||-.|+|=|...+ .....||.. .+ -.|.. ... |.+... .||+..+ +---.|.|.+
T Consensus 170 ~~~~dgyVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~-------vgElSv~~~~ 240 (316)
T PF13810_consen 170 FVKDDGYVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP-------VGELSVRYNE 240 (316)
T ss_pred ccCCCCEEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC-------ccceEEEEeC
Confidence 33345655555554332 222234422 11 11100 012 544211 3555332 2234567777
Q ss_pred CCCeEEEEEeeeeCCcceEEEEEeCCCC-CcEEc
Q 014058 202 PDGRWRVLVGGQIDNEGMAFVYWSWDFI-HWTKL 234 (431)
Q Consensus 202 ~~g~~~M~~ga~~~~~G~i~ly~S~Dl~-~W~~~ 234 (431)
..|+|+|+.... ..+.|.+.++++.. .|+..
T Consensus 241 ~~gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~ 272 (316)
T PF13810_consen 241 YLGKWVLSYFDA--GTGGIVLRTAPSPTGPWSEP 272 (316)
T ss_pred CCCEEEEEEecc--cCCcEEEEecCCCCCCCCCC
Confidence 789999998643 33567888888876 58743
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.64 E-value=15 Score=39.17 Aligned_cols=98 Identities=14% Similarity=0.144 Sum_probs=58.4
Q ss_pred EccCCeEEEEEeeccC---CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEe
Q 014058 135 ILPGDKPFILYTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (431)
Q Consensus 135 ~~~dg~~~l~YTg~~~---~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~g 211 (431)
+..+|++++||--+.. .+...=++|+|+|. .+|+.. .+++.|...++.....--.+|-. .++.+.|+-|
T Consensus 48 iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~--piaL~Pd~~~d~~g~ySGSAV~~-~~~l~lfytg 119 (486)
T COG1621 48 IYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDL-----VHWEHL--PIALAPDDDYDSHGCYSGSAVVD-DGNLSLFYTG 119 (486)
T ss_pred eEECCEEEEEEecCCCCCCCCCceeeeeccCCc-----ccceEC--CceecCCCccccCCceeeeEEEe-CCcEEEEEcc
Confidence 3458999999986532 13344568999884 899974 23454444334444444444433 3566777766
Q ss_pred eeeC---Ccc-eEEEEEeCCCCCcEE-ccccccc
Q 014058 212 GQID---NEG-MAFVYWSWDFIHWTK-LDHPLYS 240 (431)
Q Consensus 212 a~~~---~~G-~i~ly~S~Dl~~W~~-~~~~l~~ 240 (431)
...+ .+. .=.+..|+|..++++ .+.++..
T Consensus 120 ~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~ 153 (486)
T COG1621 120 NVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIID 153 (486)
T ss_pred ceeccCCcceeEEEEEEEcCCCceEeccCCceec
Confidence 5542 122 224678888888877 3555543
|
|
| >PTZ00334 trans-sialidase; Provisional | Back alignment and domain information |
|---|
Probab=83.77 E-value=11 Score=42.48 Aligned_cols=124 Identities=18% Similarity=0.179 Sum_probs=70.3
Q ss_pred CCCcceEEEEEeC-----CCccceecccccCCCC-c--cCC-CCe--EeecEEEccCCeEEEEEeeccCCCceeEEEEEe
Q 014058 93 FGDKMIWAHSVSY-----DLINWIHLSHALCPSG-P--YDI-NSC--WSGSVTILPGDKPFILYTGIDASGQQVQNLAMP 161 (431)
Q Consensus 93 wg~~~~WgHa~S~-----Dlv~W~~~~~aL~P~~-~--~D~-~gv--~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S 161 (431)
|+-....|+++-. .-|.|.+. ..|.... . ... .+. --||.|+..||.+++==.+...++...-.|.+|
T Consensus 215 ~~l~Lv~G~Vt~~~~~~~k~I~W~~~-~~l~~~~~~~~~~~l~~~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS 293 (780)
T PTZ00334 215 WGLLVAVGNVSNDGSSGKKKIYWKDA-SVIPWTDFEKQHESLTRLIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYS 293 (780)
T ss_pred CccEEEEEEeecCCCCCcceEECcCc-ccCCccccccccccceeecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEe
Confidence 4435677888632 24999773 2331111 1 010 011 124556667998776545544445555567889
Q ss_pred cCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCC-CCcEEcc
Q 014058 162 ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF-IHWTKLD 235 (431)
Q Consensus 162 ~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl-~~W~~~~ 235 (431)
+|.+ +|+ .+. +......+||.|+-. ++|+-.|+.... + |+=.+|+|.|. ..|+..-
T Consensus 294 ~d~g-----~W~-ls~--------g~s~~gC~~P~I~EW-e~gkLlM~t~C~-d--G~RrVYES~DmG~tWtEAl 350 (780)
T PTZ00334 294 SATE-----SGN-LSK--------GMSADGCSDPSVVEW-KEGKLMMMTACD-D--GRRRVYESGDKGDSWTEAL 350 (780)
T ss_pred cCCC-----CeE-EcC--------CCCCCCCCCCEEEEE-cCCeEEEEEEeC-C--CCEEEEEECCCCCChhhCC
Confidence 8863 585 221 112245789997755 467877766543 2 33358999886 7898653
|
|
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=81.73 E-value=53 Score=31.89 Aligned_cols=142 Identities=14% Similarity=0.264 Sum_probs=69.9
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCcc---ceecccccCCCCc-cCCCCeEeecEEEccCCeEE
Q 014058 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN---WIHLSHALCPSGP-YDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 69 DPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~---W~~~~~aL~P~~~-~D~~gv~SGsav~~~dg~~~ 142 (431)
-|. ++|+ +..|.|.||+.| ......||+|.-+ |....+ |..+.. ....|...-- |+-++-..|
T Consensus 78 AP~-vFYFaPk~~W~L~yQwg~--------~~fsY~Ts~DptnpngWSapq~-lf~g~i~~~~~g~iD~~-vI~D~~n~y 146 (271)
T PF03664_consen 78 APQ-VFYFAPKNIWYLAYQWGP--------AAFSYSTSSDPTNPNGWSAPQP-LFSGSISGSGTGPIDQW-VICDDTNMY 146 (271)
T ss_pred cce-EEEecCCcEEEEEEecCC--------CcceeecCCCCCCCccCCCCcc-cccccccCCCCCceeeE-EEecCCceE
Confidence 455 6776 789999999743 3356678888753 765433 322221 1112322332 333466789
Q ss_pred EEEeeccCCCceeEEEEEecCCCCCccceeeee-cCCcEEcCCCCCCCCCccCCeEEEec-CCCeEEEEEeeeeCCcce-
Q 014058 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF-SGNPVMTPPNGVKDDMFRDPTTAWQA-PDGRWRVLVGGQIDNEGM- 219 (431)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~-~~~Pvi~~p~~~~~~~~RDP~Vv~~~-~~g~~~M~~ga~~~~~G~- 219 (431)
||+++-+ ++..+-...+ .+|-.. ...+++...+. ...-|.-+. |++- ..++|.|++=+... .|+
T Consensus 147 LFfa~Dn-GkiYRs~~~i---------~nFP~~fgs~~~vvmsd~-~~nLFEA~~-VYkv~G~~~YLmiVEaiGs-~gRy 213 (271)
T PF03664_consen 147 LFFAGDN-GKIYRSSMPI---------GNFPGGFGSSYTVVMSDT-RNNLFEAVQ-VYKVKGQNQYLMIVEAIGS-DGRY 213 (271)
T ss_pred EEEcCCC-CcEEEeccch---------hhCCCCCCCceEEEEecC-ccceeeeeE-EEEEcCCceEEEEEEEecC-CCcE
Confidence 9999754 2222211111 122111 11233311111 123566666 4553 34789999866542 332
Q ss_pred EEEEEeCCC-CCcEEc
Q 014058 220 AFVYWSWDF-IHWTKL 234 (431)
Q Consensus 220 i~ly~S~Dl-~~W~~~ 234 (431)
..-++|..| -.|+-.
T Consensus 214 FRSfTa~sL~G~Wtp~ 229 (271)
T PF03664_consen 214 FRSFTATSLDGPWTPQ 229 (271)
T ss_pred EEeeecCCCCCcceec
Confidence 223334555 367654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 431 | ||||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 1e-135 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 1e-134 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 1e-127 | ||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 1e-127 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 1e-127 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 1e-126 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 1e-126 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 1e-126 | ||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 6e-94 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 2e-34 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 5e-34 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 1e-24 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 4e-24 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 3e-19 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 2e-16 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 2e-16 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 9e-16 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 1e-15 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 3e-08 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 3e-08 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 1e-07 |
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 431 | |||
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 0.0 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 1e-174 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 1e-173 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 1e-145 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 1e-136 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 1e-131 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 1e-124 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 1e-122 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 1e-120 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 2e-87 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 6e-09 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 2e-07 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 7e-07 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 3e-06 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 2e-05 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 5e-05 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 7e-05 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 1e-04 |
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 519 bits (1338), Expect = 0.0
Identities = 216/363 (59%), Positives = 269/363 (74%), Gaps = 4/363 (1%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
QPY T YHF+PP NW+NDPNGPM Y+GVYH FYQYNP FGD +IW H+VSYDL+NW
Sbjct: 4 EQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNW 63
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
IHL A+ P+ D SCWSGS TILPG+ P +LYTG D+ +QVQ+LA P+NLSDP L+
Sbjct: 64 IHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLR 123
Query: 171 DWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIH 230
+WVK NP++TPP GVKDD FRDP+TAW PDG WR++VGG DN GMAF+Y S DF++
Sbjct: 124 EWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVN 183
Query: 231 WTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290
W + D PL S TG WECPD +PV +N T G+DTSV V+HV+K + HD+Y +
Sbjct: 184 WKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTI 241
Query: 291 GTYDPQMDIFSPDTDFHGNSN--DLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQD 348
GTY P + F P + DLRYDYG+FYASK+FFD AKNRRVLWAW E+DS D
Sbjct: 242 GTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQAD 301
Query: 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGIT 408
DI+KGW+G+Q+ PRA+W+D++GKQL+QWPVEEIE LR QV++ +K L GS++E+ GI
Sbjct: 302 DIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIA 361
Query: 409 ASQ 411
ASQ
Sbjct: 362 ASQ 364
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 499 bits (1285), Expect = e-174
Identities = 164/366 (44%), Positives = 237/366 (64%), Gaps = 2/366 (0%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD 106
S T++HF+P ++W++DP+GP++YKG YH FYQYNP P++G+ W H+VS D
Sbjct: 11 SNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGN-NTWGHTVSRD 69
Query: 107 LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSD 166
LI+W++L AL YD+ +SGS T LP + +LYTG+ ++ +LA P +LSD
Sbjct: 70 LIHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSD 129
Query: 167 PLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSW 226
PLL +WVK+ GNP+++ P GV FRD +T W +G WR+ +G + + G+A VY +
Sbjct: 130 PLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETK 189
Query: 227 DFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHD 286
DF + L+ L++V +TG+WEC D++PVS G G++TSV P VKHVLK S+ + D
Sbjct: 190 DFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRD 249
Query: 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDST 346
YY +GTYD + ++PD LRYD+GK+YASKTF+D K RRV+WAW E DS
Sbjct: 250 YYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSE 309
Query: 347 QDDIDKGWSGVQTVPRAIWLD-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVS 405
D +KGW+ VQT+PR + LD K+G ++ WPVEE+E+LR + G+GS+V +
Sbjct: 310 VADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLD 369
Query: 406 GITASQ 411
TA+Q
Sbjct: 370 VGTATQ 375
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 495 bits (1275), Expect = e-173
Identities = 218/371 (58%), Positives = 267/371 (71%), Gaps = 7/371 (1%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD 106
S NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S D
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTD 59
Query: 107 LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSD 166
LINW A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSD
Sbjct: 60 LINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSD 119
Query: 167 PLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224
P L++W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y
Sbjct: 120 PYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYT 179
Query: 225 SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLF 281
S DF+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL
Sbjct: 180 SKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLD 239
Query: 282 SDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWAN 341
KHDYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W N
Sbjct: 240 DTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTN 299
Query: 342 ESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGS 400
ES S +DD++KGWSG+QT+PR IWLD+SGKQL+QWPV E+E LR KQV ++ +K L SGS
Sbjct: 300 ESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGS 359
Query: 401 IVEVSGITASQ 411
+EV G+TA+Q
Sbjct: 360 RLEVYGVTAAQ 370
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 421 bits (1085), Expect = e-145
Identities = 103/394 (26%), Positives = 149/394 (37%), Gaps = 44/394 (11%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
+QPY YHF P +NW+NDPNG +Y+ G YHLF+QYNP G +G+ + W H++S DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGN-ISWGHAISEDLTHW 62
Query: 111 IHLSHALCPSGPYDINS--CWSGSVTILPGDKP----------FILYTGI---------- 148
AL G + +SGS + +YT
Sbjct: 63 EEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSG 122
Query: 149 --DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDM---FRDPTTAWQAPD 203
QQ Q++A D L + NPV+ P + FRDP W
Sbjct: 123 QTVQEDQQSQSIAYS---LDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDES 179
Query: 204 GRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG- 262
+W V I +Y S + W + + G+WECP + + ++
Sbjct: 180 QKWV--VVTSIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNST 237
Query: 263 --VDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK- 319
V TS LNPG S Y +G +D DT + GNS D+G
Sbjct: 238 KWVITSGLNPGGPPGTVGS-----GTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPD 292
Query: 320 FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ--LVQWP 377
FYA+ + + N V W N + W +PR + L G + LVQ P
Sbjct: 293 FYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
Query: 378 VEEIETLRGKQVSIHDKELGSGSIVEVSGITASQ 411
E ++ K+ + T
Sbjct: 353 QEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGET 386
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 400 bits (1030), Expect = e-136
Identities = 96/382 (25%), Positives = 151/382 (39%), Gaps = 36/382 (9%)
Query: 45 QVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVS 104
+++A N + YH WINDPNG +YKG +H+FYQ +P G +G M W H S
Sbjct: 30 EMAAKRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGP-MHWGHVSS 88
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI--------DASGQQVQ 156
D++NW PS + + +SGS I YTG QVQ
Sbjct: 89 TDMLNWKREPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQ 148
Query: 157 NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
A+P+N ++ P D +RDP W + G +
Sbjct: 149 MTALPDNDE-----LTSATKQGMIIDCPTDKVDHHYRDPKVWKT--GDTWYMTFGVSSAD 201
Query: 217 E-GMAFVYWSWDFIHWTKLDHPLYS-VQETGMWECPDIFPVSINGTIGV---DTSVLNPG 271
+ G +++ S D + W + M ECPD P+ S +
Sbjct: 202 KRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSK 261
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA 330
+ ++ + Y++GT++P + F P+T+F +D G +YA ++F
Sbjct: 262 PSGFMNRNVS---NAGYMIGTWEPGGE-FKPETEFR------LWDCGHNYYAPQSFNV-- 309
Query: 331 KNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVS 390
R++++ W + D GW G T+PR I L G +V PV E+E LR +
Sbjct: 310 DGRQIVYGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDGD-VVTAPVAEMEGLREDTLD 368
Query: 391 IHDKELGSGSIVEVSGITASQV 412
L ++ A V
Sbjct: 369 HGSVTLDMDG-EQIIADDAEAV 389
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 386 bits (993), Expect = e-131
Identities = 89/397 (22%), Positives = 161/397 (40%), Gaps = 58/397 (14%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD 106
S + Y SYHF P Q W+N+PNG + +HLF+Q+NP ++G+ + W H+ S D
Sbjct: 21 SQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGN-ICWGHATSTD 79
Query: 107 LINWIHLSHALCPSGPYDINSCWSGSVTILPG----------DKPFILYTG-IDASGQQV 155
L++W H A+ + ++G+ P +TG +S Q
Sbjct: 80 LMHWAHKPTAIADENGVE---AFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQD 136
Query: 156 QNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDM-----FRDPTTAWQAPDGRWRVLV 210
Q LA + W KF GNP+++ D+ RDP + G W +++
Sbjct: 137 QRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVL 192
Query: 211 GGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV-----QETGMWECPDIFPVSINGTIGVDT 265
+ + S D I+WT + + WE PD+F + + GT
Sbjct: 193 AHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT----- 245
Query: 266 SVLNPGVKHVLKTSL-----FSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK- 319
V+ + + G++D + P +++ + D G+
Sbjct: 246 ----EETTWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTADPV-----DASTMWLDNGRD 296
Query: 320 FYASKTFFD--SAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ--LVQ 375
F + ++ + ++ RR++ A N S W G+ + PR + L K G Q VQ
Sbjct: 297 FDGALSWVNVPASDGRRIIAAVMNSYGSNPP--TTTWKGMLSFPRTLSLKKVGTQQHFVQ 354
Query: 376 WPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQV 412
P+ E++T+ + ++ + G + +S I + +
Sbjct: 355 QPITELDTISTSLQILANQTITPGQTL-LSSIRGTAL 390
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 365 bits (938), Expect = e-124
Identities = 103/351 (29%), Positives = 167/351 (47%), Gaps = 49/351 (13%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
+ +YHF P W+NDPNG +++KG YH+FYQYNP P +G+ + W H+VS DL++W HL
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGN-ICWGHAVSDDLVHWRHL 60
Query: 114 SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI-----DASGQQVQNLAMPENLSDPL 168
AL P + + +SGS + K F++YT + ++ Q + M EN
Sbjct: 61 PVALYPD--DETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN----- 112
Query: 169 LKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWD 227
D+VK+ GNPV++ P FRDP +G WR+++G D + G +Y S D
Sbjct: 113 GLDFVKYDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDD 170
Query: 228 FIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDY 287
HW + ++ + T +CPD+ + G K +L S+ S
Sbjct: 171 LFHWK-YEGAIFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVL 214
Query: 288 YVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANE--SD 344
+ +G + + D+G FYA++TFF +R V+ W
Sbjct: 215 FSMGELKE--GKLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRT 263
Query: 345 STQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKE 395
+GW+GV ++PR ++++ +L PV+E+ LR ++V K
Sbjct: 264 GLYPTKREGWNGVMSLPRELYVE--NNELKVKPVDELLALRKRKVFETAKS 312
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 364 bits (936), Expect = e-122
Identities = 85/383 (22%), Positives = 147/383 (38%), Gaps = 49/383 (12%)
Query: 46 VSAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSV 103
+S ++ HF P + W+NDPNG Y K ++HL++QYNP +G + W H+
Sbjct: 1 LSVDTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHAT 60
Query: 104 SYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGID------------AS 151
S DL++W A+ P +D +SGS+ + + + ID
Sbjct: 61 SNDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIP 118
Query: 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211
Q Q++A + + K+ NPV+ + + FRDP W +W ++V
Sbjct: 119 DNQTQDIAFSLDGG----YTFTKYENNPVIDVSS----NQFRDPKVFWHEDSNQWIMVVS 170
Query: 212 GQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGV-DTSVLNP 270
E ++ S + +W + S +ECP + V I + L
Sbjct: 171 KS--QEYKIQIFGSANLKNWVLNSN-FSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAI 227
Query: 271 GVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDS 329
L S + Y +G +D F PD +S D GK FYA +TF +
Sbjct: 228 NPGSPLGGS-----INQYFVGDFDG--FQFVPD-----DSQTRFVDIGKDFYAFQTFSE- 274
Query: 330 AKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWL-------DKSGKQLVQWPVEEIE 382
++ + AWA+ W ++ R L + L+Q PV
Sbjct: 275 VEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDS 334
Query: 383 TLRGKQVSIHDKELGSGSIVEVS 405
++ + +L + ++ +
Sbjct: 335 INVVDKLKKKNVKLTNKKPIKTN 357
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 359 bits (923), Expect = e-120
Identities = 78/384 (20%), Positives = 134/384 (34%), Gaps = 63/384 (16%)
Query: 58 YHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL 117
YH PP W+ +P P+ G Y L+Y ++ W H+ + D + + H +
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNN---GPGGWDHASTTDGVAFTHHGTVM 60
Query: 118 CPSGPYDINSCWSGSVTILPGDKPFILYTGI----------DASGQQVQNLAMPEN---- 163
+ WSGS + G Q Q L +
Sbjct: 61 PLRPDFP---VWSGSAVVDTA-NTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFT 116
Query: 164 ---LSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMA 220
L DP++ + G TP + FRDP W G W ++G A
Sbjct: 117 FTALPDPVIVNT---DGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL----RYA 169
Query: 221 FVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280
Y S + WT + Y G ECPD+F ++ + VL S+
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRHWVLAASM 219
Query: 281 FSDKHDY-----YVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTF--FDSAKN 332
+ Y GT+D + F D + D+G +YA+ T+ D+ +
Sbjct: 220 DAYGIGLPMTYAYWTGTWDG--EQFHAD-----DLTPQWLDWGWDWYAAVTWPSIDAPET 272
Query: 333 RRVLWAWANESDSTQDDI----DKGWSGVQTVPRAIWLDK---SGKQLVQWPVEEIETLR 385
+R+ AW N D+ G++G ++ R + L + L+ PV +
Sbjct: 273 KRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYV 332
Query: 386 GKQVSIHDKELGSGSIVEVSGITA 409
++ D+ + +++ +G
Sbjct: 333 TATTTLPDRTVDGSAVLPWNGRAY 356
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 277 bits (710), Expect = 2e-87
Identities = 72/469 (15%), Positives = 134/469 (28%), Gaps = 114/469 (24%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMY--YKGVYHLFYQYNPLGPLFGDKMIWAHSVS 104
+ + H P + I DP G++H+ + ++ G A + +
Sbjct: 19 NNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG--------IAGATT 70
Query: 105 YDLINWIHLSH----ALCPSGPYDINSCWSGS-VTILPGDKPFILYTGIDAS-------- 151
+L + S + P G D + + G+ + + + P +LYT +
Sbjct: 71 ANLATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPY 130
Query: 152 --GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT-PPNGVKDDMFRDP------------- 195
G + Q+LA ++ + + K PV+ P V FR P
Sbjct: 131 TRGSETQSLA----VARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLS 186
Query: 196 ---------------TTAWQAPDGRWRVLVGGQI-DNEGMAFVY-----WSWDFIHWTKL 234
W + W V V G + F+Y + +F +W L
Sbjct: 187 LDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYL 246
Query: 235 DHPLYSVQETG-------------MWECPDIFPVSINGTIGVDTSVLN----PGVKHVLK 277
+ +E ++ ++ G V G +
Sbjct: 247 GEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEGSGLPIV 306
Query: 278 TSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA------ 330
+ S + G + +F + D+G YA+ A
Sbjct: 307 PQVSSIHDMLWAAGEVGVGSEQEGAKVEFSPSM-AGFLDWGFSAYAAAGKVLPASSAVSK 365
Query: 331 -----KNRRVLWAWANESDSTQDD----IDKGWSGVQTVPRAIWL---------DKSGKQ 372
+R V + W Q D +GW+G +PR + + + ++
Sbjct: 366 TSGVEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREE 425
Query: 373 LVQWPVEE-------IETLRGKQVSIHDKELGSGSIVEVSGITASQVNS 414
V W V E + TL L + V Q +
Sbjct: 426 GVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTAA 474
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 6e-09
Identities = 33/216 (15%), Positives = 67/216 (31%), Gaps = 23/216 (10%)
Query: 66 WINDPNGPMYYKGVYHLFYQYNPLGPLF------------GDKMIWAHSVSYDLINWIHL 113
DP+ + G Y+++Y + D+ ++ S D W
Sbjct: 94 VRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDGWTWKEE 153
Query: 114 SHALC--PSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKD 171
A+ G YD S ++ + + DK ++ Y + + + +D
Sbjct: 154 GPAVTRGEKGAYDDRSVFTVEI-MKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP 212
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ-IDNEGMAFVYWS----W 226
W K + NGV +D + D + I +G ++Y+
Sbjct: 213 WTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIPYKGKFYLYYKGEQMG 272
Query: 227 DFIHWTKLDHPL---YSVQETGMWECPDIFPVSING 259
+ I + + G + P+S +G
Sbjct: 273 EAITFGGRQIRHGVAIADNPKGPYVKSPYNPISNSG 308
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 2e-07
Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 25/168 (14%)
Query: 66 WINDPNGPMYYKGVYHLFYQYNPLGPLF------------GDKMIWAHSVSYDLINWIHL 113
DP+ + Y+++Y + D+ ++ S D + W
Sbjct: 89 VRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGLTWKEQ 148
Query: 114 SHAL--CPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKD 171
A+ G YD S ++ V + K ++ Y + + + +D
Sbjct: 149 GIAVKRGEKGAYDDRSVFTPEV-MEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGL 207
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGM 219
W K + PV+ P D D R++V+ G D+ +
Sbjct: 208 WTK-TDKPVLEP---------SDTGEWEGDEDNRFKVVSKGDFDSHKV 245
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 7e-07
Identities = 41/271 (15%), Positives = 80/271 (29%), Gaps = 31/271 (11%)
Query: 52 QPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLF------------GDKMIW 99
P + DP+ + YH++Y + DK
Sbjct: 36 TPLKGDLAYEEGVIR-RDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEV 94
Query: 100 AHSVSYDLINWIHLSHALC--PSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQN 157
H+ S D I W + A+ +G YD + ++ V +++Y + A
Sbjct: 95 WHATSKDKITWKEIGPAIQRGAAGAYDDRAVFTPEVLRH-NGTYYLVYQTVKAPYLNRSL 153
Query: 158 LAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217
+ SD W K S P+++P + D R+ V G D+
Sbjct: 154 EHIAIAYSDSPFGPWTK-SDAPILSPE---------NDGVWDTDEDNRFLVKEKGSFDSH 203
Query: 218 GMAFVYWSW--DFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHV 275
+ + + + + G E ++ + S NP
Sbjct: 204 KVHDPCLMFFNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKSEYNPITNSG 263
Query: 276 LKTSLFSDKHDYYVLGTYDPQMD---IFSPD 303
+ +++ K + T D ++ D
Sbjct: 264 HEVAVWPYKGGMATMLTTDGPEKNTCQWAED 294
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 3e-06
Identities = 23/185 (12%), Positives = 53/185 (28%), Gaps = 19/185 (10%)
Query: 65 NWINDPNGPMYYKGVYHLFY--QYNPLGPLFGDKMIWAHSVSYDLINWIHLSH-ALCPSG 121
+ +P Y G + Y + N + ++ S D I++ + A P+
Sbjct: 48 SDTFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAK 106
Query: 122 PYDINSCWSGS-----VTILPGDKPFILYTGIDASGQQVQNLAMPENLSD----PLLKDW 172
+ G + + +LYT + ++ +A ++L +
Sbjct: 107 DNQAENECPGGTEDPRIAMTEDGTYVLLYTQWNRKVPRLA-VATSKDLKHWTKFGPAFEK 165
Query: 173 VKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWT 232
+ + +G++ + G E + S + I W
Sbjct: 166 AYNGKFKDEATKSASLVTTLKGDKQVIAKVNGKYFMYWG-----EKNVYAATSDNLIDWD 220
Query: 233 KLDHP 237
L
Sbjct: 221 PLLDE 225
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 2e-05
Identities = 29/184 (15%), Positives = 45/184 (24%), Gaps = 27/184 (14%)
Query: 75 YYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS----HALCPSGPYDINSCWS 130
Y G + ++ + + S D INW P+ + +
Sbjct: 63 PYNGEFVGVFRIDHKN----TRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYD 118
Query: 131 GSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLL--KDWVKFSGNPVMTPPNGVK 188
V + D +I + D + KD+ F P P
Sbjct: 119 PRVVKI-EDTYYITFCTDDHGPTI------------GVGMTKDFKTFVRLPNAYVPFNRN 165
Query: 189 DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWE 248
+F R G F+ S D IHW + WE
Sbjct: 166 GVLFPRKINGKYVMLNRP---SDNGHTPFGDIFLSESPDMIHWGN-HRFVLGRSSYNWWE 221
Query: 249 CPDI 252
I
Sbjct: 222 NLKI 225
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 5e-05
Identities = 39/232 (16%), Positives = 62/232 (26%), Gaps = 35/232 (15%)
Query: 75 YYKGVYHLFYQYNPLGPLFGDK---MIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSG 131
+ G + P D +++ D +W + P WSG
Sbjct: 143 NWNGYQLVIGMMGV--PNVNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPVIQQ--WSG 198
Query: 132 SVTILPGDKPFILYTGIDASGQQ--VQNLA-----MPENLSDPLLKDW------VKFSGN 178
S T+ + YT +D S Q LA + + + F G+
Sbjct: 199 SATLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGD 258
Query: 179 PVM--------TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ--IDNEGMAFVYWSWDF 228
G + RD +G ++ +N + W
Sbjct: 259 GYHYQTYDQWKETNKGADNIAMRDAHV-IDDDNGNRYLVFEASTGTENYQGDDQIYQWLN 317
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTS---VLNPGVKHVLK 277
T D+ Q + D S N IG+ V NP V V
Sbjct: 318 YGGTNKDNLGDFFQILSNSDIKDRAKWS-NAAIGIIKLNDDVKNPSVAKVYS 368
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 43.6 bits (102), Expect = 7e-05
Identities = 23/165 (13%), Positives = 49/165 (29%), Gaps = 11/165 (6%)
Query: 119 PSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL--SDPLLKDWVKFS 176
S ++ N ++ + L + +LY D SG + + S + +
Sbjct: 44 DSIAWESNDTFNPAA-TLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGT-HF-QRE 100
Query: 177 GNPVMTPPNGVKDDMF-----RDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHW 231
PV P N + ++ DP DG + ++ + V S + W
Sbjct: 101 KTPVFYPDNDSQKELEWPGGCEDPR-IAVTDDGLYVMMYTQWNRHVPRLAVATSRNLKDW 159
Query: 232 TKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVL 276
TK + + + + + K+ +
Sbjct: 160 TKHGPAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFM 204
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 1e-04
Identities = 38/250 (15%), Positives = 73/250 (29%), Gaps = 37/250 (14%)
Query: 67 INDPNG-PMYYKGVYHLFYQYNPLGPLFGD----KMIWAHSVSYDLINWIHLSHALCPSG 121
+ + +G Y G + +F P D M + + +W + S
Sbjct: 64 LQNADGTVANYHGYHIVFALAGD--PKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSD 121
Query: 122 PYDI--------NSCWSGSVTILPGDKPFILYTGIDASGQQVQNLA-----MPENLSDPL 168
+D WSGS T K + YT Q L + + S
Sbjct: 122 KFDANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLN 181
Query: 169 LKDWVK----FSGNPVM--------TPPNGVKDDM--FRDPTTAWQAPDGRWRVLVGGQI 214
+ F G+ N D RDP + ++ V
Sbjct: 182 INGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY-VEDKGHKYLVFEANTG 240
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI-NGTIGVDTSVLNPGVK 273
+G ++ ++ K + + + + + NG +G+ + +K
Sbjct: 241 TEDGYQGEESLFNKAYYGK-STSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLK 299
Query: 274 HVLKTSLFSD 283
V+K + S+
Sbjct: 300 KVMKPLIASN 309
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 431 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 100.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 100.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 100.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 100.0 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 100.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 100.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 100.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 100.0 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 100.0 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 100.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 100.0 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 99.97 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.93 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.93 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 99.93 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.92 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.92 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 99.9 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.88 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 99.87 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 99.84 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 99.84 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 99.83 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.83 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 99.83 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 99.8 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 99.69 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.68 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.65 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 99.63 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 99.62 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 99.61 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 99.6 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.59 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.58 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.52 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.5 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.47 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 99.38 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 99.36 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 99.07 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 99.05 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 99.0 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.88 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 98.6 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 98.51 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 98.47 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 98.41 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 98.27 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 98.23 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.2 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 98.18 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 98.07 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.06 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 98.03 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 98.01 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 97.95 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 97.84 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 97.84 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 97.81 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 97.81 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 97.76 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 97.65 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.58 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 97.42 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 97.3 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 97.27 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 97.24 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 97.2 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 97.04 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 97.02 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 97.02 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 96.81 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.52 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 96.32 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 96.18 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 96.11 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 95.92 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 95.66 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 95.53 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 95.27 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 93.93 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 93.87 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 93.71 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 93.57 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 93.19 | |
| 2sli_A | 679 | Intramolecular trans-sialidase; hydrolase, neurami | 92.92 | |
| 2w20_A | 471 | Sialidase A; secreted, cell WALL, hydrolase, glyco | 92.78 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 91.09 | |
| 3sil_A | 379 | Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 | 91.08 | |
| 1ms9_A | 648 | Trans-sialidase; trans-glycosylation, protein-acrb | 90.6 | |
| 2jkb_A | 686 | Sialidase B; intramolecular trans-sialidase, lyase | 90.1 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 87.97 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 87.78 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 87.45 | |
| 1w0p_A | 781 | Sialidase; hydrolase, neuraminidase, lectin; HET: | 86.24 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-96 Score=776.36 Aligned_cols=369 Identities=44% Similarity=0.872 Sum_probs=336.8
Q ss_pred CCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEee
Q 014058 52 QPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSG 131 (431)
Q Consensus 52 ~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SG 131 (431)
+.+||+|||+|+.||||||||++|++|+|||||||||+++.|| +++||||+|+|||||+++|+||.|+.++|.+|||||
T Consensus 16 ~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg-~~~WGHa~S~DLvhW~~~p~AL~P~~~~D~~G~~SG 94 (546)
T 3ugf_A 16 SWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWG-NNTWGHTVSRDLIHWLYLPLALAADQWYDMQGVFSG 94 (546)
T ss_dssp HHTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSSC-SCEEEEEEESSSSSCEECCCCBCSCSGGGTTCEEEE
T ss_pred hhcCCeEEEeCCCCCccCCceeEEECCEEEEEEecCCCCCCCC-CcEEEEEEcCCcCccccCCCCCCCCcccccCCcCcc
Confidence 4679999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEe
Q 014058 132 SVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (431)
Q Consensus 132 sav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~g 211 (431)
||++++||+++|+|||+..+..|.|++|+|+|++|+.|++|+|++.||||.+|+++...+||||+|+|++++|+|+|++|
T Consensus 95 Savv~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRDPkVvw~~~~g~w~MviG 174 (546)
T 3ugf_A 95 SATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIG 174 (546)
T ss_dssp EEEECTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCCBCCCEECSTTCEEEEEE
T ss_pred eEEEeeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeeccceEeECCCCEEEEEEE
Confidence 99887899999999998766789999999999999999999999889999887777778999999889878999999999
Q ss_pred eeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEe
Q 014058 212 GQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (431)
Q Consensus 212 a~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (431)
++.+..|++++|+|+||++|++.+.++......+||||||||+|+..+.+++++|+++.+.||||+.|.++.+.++|++|
T Consensus 175 a~~~~~G~vllY~S~DL~~W~~~~~~~~~~~~~gmwECPDlf~l~~~~~~gl~~s~~g~~~k~Vl~~s~~~~~~~~Y~iG 254 (546)
T 3ugf_A 175 AKYNTTGIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAIG 254 (546)
T ss_dssp EEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCEEEEEEEEEESSCSSCCCTTCCSTTEEEEEEEEETTTTEEEEEEE
T ss_pred EccCCcceEEEEECCCCCCceEcccccccCCCCCeEECCeEEEECCcCccceeecccCCceeEEEEecccCCCceEEEEe
Confidence 98877899999999999999999876654345569999999999976667789998877889999999987788999999
Q ss_pred eecCCCCeeecCCCCCCCCCceecccCCCcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEEEec-CC
Q 014058 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK-SG 370 (431)
Q Consensus 292 ~~d~~~~~f~p~~~~~~~~~~~~lD~G~fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~l~~-~G 370 (431)
+||+++.+|+|+....|.+.+.++|+|.|||+|||.++.++|||+||||+++++..++.+.||+|+|||||||+|++ +|
T Consensus 255 ~~d~~~~~f~~~~~~~d~g~~~~lD~GdfYA~qtf~d~~~gRril~gWm~~~d~~~~~~~~gW~g~ltlPRel~l~~~~g 334 (546)
T 3ugf_A 255 TYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPRTVLLDQKTG 334 (546)
T ss_dssp EEETTTTEEEESCGGGCTTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEECTTTS
T ss_pred eecCCCCeeecCCcccccCccccccCCCccCcceeecCCCCCEEEEEeCCCCCcCCCCcccCccCcceeCEEEEEEeCCC
Confidence 99998889999875455555679999999999999997679999999999998776666789999999999999974 45
Q ss_pred CeEEecchHHHHhhhccceeccceeeCCCceEEecccccceEEEEEEEEEe
Q 014058 371 KQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVNSFHCILLY 421 (431)
Q Consensus 371 ~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (431)
.+|+|+||+||++||++++.+.+..+++|+.+++.++.+.|+|+|++|.+.
T Consensus 335 ~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~q~di~~~f~~~ 385 (546)
T 3ugf_A 335 TNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEFEID 385 (546)
T ss_dssp SSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCCSCCSEEEEEEEEEEC
T ss_pred CEEEEEehHHHHHHhcCcceecceEecCCCeEEecCCCccEEEEEEEEEec
Confidence 579999999999999999999999999999999999999999999999985
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-92 Score=748.68 Aligned_cols=373 Identities=58% Similarity=1.076 Sum_probs=334.2
Q ss_pred CCCCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCC
Q 014058 48 APANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINS 127 (431)
Q Consensus 48 ~~~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~g 127 (431)
+.++++|||+|||+|+.||||||||++|++|+|||||||+|.++.|| +++||||+|+||+||+++++||.|+.++|.+|
T Consensus 2 ~~~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~G 80 (541)
T 2ac1_A 2 PSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWG-NIVWAHSTSTDLINWDPHPPAIFPSAPFDING 80 (541)
T ss_dssp ---CCTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSC-SCEEEEEEESSSSSBEEEEEEECCCSGGGTTC
T ss_pred CCcCcccccceeecCccCCeeCCCccEEECCEEEEEEeeCCCCCCCC-CcEEEEEECCCccceEECceeecCCCccccCC
Confidence 45778999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred eEeecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC--CCCCCCCccCCeEEEecCCCe
Q 014058 128 CWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGR 205 (431)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p--~~~~~~~~RDP~Vv~~~~~g~ 205 (431)
||||||++++||+++|+|||++....|.|++|+|+|++|++|++|+|++.||||.++ +++...+||||+|+|++++|+
T Consensus 81 ~~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~ 160 (541)
T 2ac1_A 81 CWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKK 160 (541)
T ss_dssp EEEEEEEECTTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEECTTSC
T ss_pred EEcceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeEeCCCe
Confidence 999999887799999999997555689999999999989999999999889999776 666678999999889866899
Q ss_pred EEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCC---eeeEEEEeeCC
Q 014058 206 WRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPG---VKHVLKTSLFS 282 (431)
Q Consensus 206 ~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~---~k~vl~~s~~~ 282 (431)
|+|++|++.+..|++++|+|+||++|++.+.++.....++||||||||+|+..|..++++|+++.+ .||||+.|.++
T Consensus 161 w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~~~~vl~~s~~~ 240 (541)
T 2ac1_A 161 WRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240 (541)
T ss_dssp EEEEEEEEETTEEEEEEEEESSSSSCEECSSCSEEEETSCCEEEEEEEEEESSCSCCCCTTCCCBTTBCEEEEEEEEETT
T ss_pred EEEEEEEecCCceEEEEEECCCCCCcEEcccccccCCCCCcccCCcEEEECCCCcceeEecCCCCCcccceeEEEeeecC
Confidence 999999988778999999999999999988777654456899999999999777788999987655 69999999888
Q ss_pred CCeeeEEEeeecCCCCeeecCCCCCCCCCceecccCCCcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccE
Q 014058 283 DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPR 362 (431)
Q Consensus 283 ~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR 362 (431)
...++|++|+||+++.+|+|+..+.+....++||+|.|||+|||.+++++|||+||||+++++..++.+.||+|+|||||
T Consensus 241 ~~~~~Y~~G~~d~~~~~f~~~~~~~~~~~~~~lD~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPR 320 (541)
T 2ac1_A 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPR 320 (541)
T ss_dssp TTEEEEEEEEEETTTTEEEECTTCCSSTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCSSCHHHHHHHTEECEECCCE
T ss_pred CcceEEEEEEEecCCCeEeeCCccccccceeeecCCCcccccEEecCCCCCEEEEEEeCCCCcCCCCCCCCcccccccCE
Confidence 88899999999998789999876655555679999999999999997569999999999998765666789999999999
Q ss_pred EEEEecCCCeEEecchHHHHhhhccce-eccceeeCCCceEEecccccceEEEEEEEEEe
Q 014058 363 AIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGSIVEVSGITASQVNSFHCILLY 421 (431)
Q Consensus 363 ~L~l~~~G~~L~q~Pv~el~~Lr~~~~-~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (431)
+|+|+++|++|+|+||+||++||++++ .+.+..++.+..+++.++.+.|++++++|.+.
T Consensus 321 el~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 380 (541)
T 2ac1_A 321 KIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVR 380 (541)
T ss_dssp EEEECTTSSSEEEEECGGGGGGBCSSCEEEEEEEECTTEEEECCSSCTTEEEEEEEEECS
T ss_pred EEEEEcCCCEEEEeeHHHHHHhhccccccccceEecCCceeEecCCccceeeeEEEEecc
Confidence 999987886699999999999999887 77777888888888999989999999998775
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-92 Score=744.61 Aligned_cols=369 Identities=59% Similarity=1.163 Sum_probs=333.0
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCc-ceEEEEEeCCCccceecccccCCCCccCCCCe
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDK-MIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~-~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv 128 (431)
.+++|||+|||+|+.||||||||++|++|+|||||||+|.++.|| + ++||||+|+||+||+++++||.|+..+|.+||
T Consensus 3 ~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFYQ~~P~~~~~g-~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~Gv 81 (543)
T 1st8_A 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFG-DVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSC 81 (543)
T ss_dssp CSSTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSCC-SCCEEEEEEESSSSSEEECCCSBCCCSGGGTTEE
T ss_pred cCccccccccccCCcCCeECCcccEEECCEEEEEEeeCCCCCCCC-CccEEEEEECCCccceEECCeeccCCCccccCCE
Confidence 468899999999999999999999999999999999999999999 8 99999999999999999999999999999999
Q ss_pred EeecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEE
Q 014058 129 WSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRV 208 (431)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M 208 (431)
|||||++++||+++|+|||.+....|.|++|+|+|++|++|++|+|++.||||.+++++...+||||+|+|++++|+|+|
T Consensus 82 ~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~vvw~~~~g~w~m 161 (543)
T 1st8_A 82 WSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRI 161 (543)
T ss_dssp EEEEEEEETTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCCCEECTTSCEEE
T ss_pred EcceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeEEEECCCCcEEE
Confidence 99999887799999999996545689999999999999999999999889999877777778999999879867999999
Q ss_pred EEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeE
Q 014058 209 LVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYY 288 (431)
Q Consensus 209 ~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y 288 (431)
++|++.+..|++++|+|+||++|++.+.++.....++||||||||+|+..|+.++++|+++.+.||||++|. ...++|
T Consensus 162 v~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~vl~~s~--~~~~~Y 239 (543)
T 1st8_A 162 VVGGDRDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWY 239 (543)
T ss_dssp EEEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCCEEEEEEEEETTCSCCCCTTCCSTTEEEEEEEEE--TTEEEE
T ss_pred EEEEecCCceEEEEEECCCCCCcEECccccccCCCCCceeCCcEEEECCCCccceEecCCCCCceEEEEecc--CCccEE
Confidence 999988778999999999999999988777654456899999999999878788999988777899999987 467899
Q ss_pred EEeeecCCCCeeecCCCCC--CCCCceecccCCCcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEEE
Q 014058 289 VLGTYDPQMDIFSPDTDFH--GNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWL 366 (431)
Q Consensus 289 ~vG~~d~~~~~f~p~~~~~--~~~~~~~lD~G~fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~l 366 (431)
++|+||+++.+|+|+..+. +.....++|+|.|||+|||.++++||||+||||+++++..++.+.||+|+|||||||+|
T Consensus 240 ~iG~~d~~~~~f~~~~~~~~~d~~~~~~lD~GdfYA~qtf~~~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l 319 (543)
T 1st8_A 240 TIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALWI 319 (543)
T ss_dssp EEEEEETTTTEEEETTCCCCCSSTTSEESBSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEE
T ss_pred EEEEEeCCCCeEeeCCccccccccceeeccCCCcccccEeecCCCCCEEEEEecCCCCcCCCCCCCCccceeeeCEEEEE
Confidence 9999999878999987543 44445699999999999999975699999999999987666667899999999999999
Q ss_pred ecCCCeEEecchHHHHhhhccceeccceeeCCCceEEecccccceEEEEEEEEEe
Q 014058 367 DKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVNSFHCILLY 421 (431)
Q Consensus 367 ~~~G~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 421 (431)
+++|++|+|+||+||++||++++.+.+..++.+..+++.++.+.|++++++|.+.
T Consensus 320 ~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 374 (543)
T 1st8_A 320 DRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISFKLE 374 (543)
T ss_dssp CTTSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCSSCTTEEEEEEEEEEC
T ss_pred EeCCCEEEEeEhHHHHHhhcCcccceeEEecCCceEEecccccceeeEEEEEeec
Confidence 8788669999999999999998888888888888889999999999999998875
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-85 Score=690.60 Aligned_cols=342 Identities=30% Similarity=0.527 Sum_probs=289.1
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeE
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~ 129 (431)
.+++|||+|||+|+.||||||||++|++|+|||||||+|+++.|| +++||||+|+|||||+++|+||.|+.++|.+|||
T Consensus 35 ~~~~~Rp~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg-~~~WgHa~S~DLvhW~~~~~aL~P~~~~d~~g~~ 113 (526)
T 3pij_A 35 RNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWG-PMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVF 113 (526)
T ss_dssp CCCSSCCSSSCBCSSEEEEEEEEEEEETTEEEEEEEEETTCSSSC-SBEEEEEEESSSSSEEECCCCBCCCBGGGTTEEE
T ss_pred cCCCccccEeEeCCcCCeeCCeEEEEECCEEEEEEEcCCCCCCcC-CcEEEEEEeCCCCCceeCeeccCCCCccccCCeE
Confidence 568999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eecEEEccCCeEEEEEeeccC--------CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEec
Q 014058 130 SGSVTILPGDKPFILYTGIDA--------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA 201 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~--------~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~ 201 (431)
||||+++.||+++|+|||+.. ...|.|++|+|+|++ |++|+|++ |||..|.+....+||||+| |+
T Consensus 114 SGSav~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~g---l~~w~K~~--pvi~~P~~~~~~~fRDP~V-~~- 186 (526)
T 3pij_A 114 SGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE---LTSATKQG--MIIDCPTDKVDHHYRDPKV-WK- 186 (526)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTT---CSCEEEEE--EEECCCGGGEEEEEEEEEE-EE-
T ss_pred eceEEEccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCC---cceEEECC--ccccCCCCccccccccCEE-EE-
Confidence 999998778899999999842 124899999999974 57999974 8886654445679999996 55
Q ss_pred CCCeEEEEEeeee-CCcceEEEEEeCCCCCcEEcccccc-cCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEe
Q 014058 202 PDGRWRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLY-SVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTS 279 (431)
Q Consensus 202 ~~g~~~M~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~-~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s 279 (431)
++|+|+|++|++. +..|+|++|+|+||++|++.+.++. ....++||||||||+|+ |.+ ++.||||++|
T Consensus 187 ~~g~w~mv~ga~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~~~~~g~mwECPdlf~l~--~~~--------g~~k~vL~~s 256 (526)
T 3pij_A 187 TGDTWYMTFGVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIK--DKD--------GNEKWVIGFS 256 (526)
T ss_dssp ETTEEEEEEEEEETTSCEEEEEEEESSSSSCEEEEEEEECSCTTCCEEEEEEEEEEE--CTT--------SCEEEEEEEE
T ss_pred ECCEEEEEEEEecCCCCcEEEEEECCCCCcceEcCcccccCCCccCeEECCEEEEEC--CCC--------CceeEEEEEe
Confidence 5899999999876 5679999999999999999987433 33457899999999998 321 2469999988
Q ss_pred eCC----------CCeeeEEEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCC
Q 014058 280 LFS----------DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD 348 (431)
Q Consensus 280 ~~~----------~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~ 348 (431)
..+ ...++|++|+||. +.+|+|+.. ++++|+|+ |||+|||. + +||||+||||++|++..+
T Consensus 257 ~~g~~~~~~~~~~~~~~~Y~vG~~d~-~~~f~~~~~------~~~lD~G~dfYA~qtf~-~-~gRri~~gW~~~~~~~~~ 327 (526)
T 3pij_A 257 AMGSKPSGFMNRNVSNAGYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFN-V-DGRQIVYGWMSPFVQPIP 327 (526)
T ss_dssp EESCCCBTTBSCSSSEEEEEEEEECT-TSCEEESSC------CEESCCSSSCEEEEEEE-E-TTEEEEEEEECCCSSCCG
T ss_pred ccccCCCccccccccceeEEEEEEcC-CCcEEECCc------ceeeeeCCCccccceeC-C-CCCEEEEEecCCCcccCC
Confidence 632 3468999999993 248998753 57899998 99999998 4 799999999999998877
Q ss_pred CCCCCccccccccEEEEEecCCCeEEecchHHHHhhhccceeccceeeCCCceEEecccccceEEEEEEEEE
Q 014058 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVNSFHCILL 420 (431)
Q Consensus 349 ~~~~gW~g~lslPR~L~l~~~G~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 420 (431)
+.+.||+|+|||||+|+|+++| +|+|+|++||++||++++.+.+..+..+..+.+.. .+.+++++++|++
T Consensus 328 ~~~~gW~g~ltlPRel~l~~~g-~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~-~~~~~el~~~~~~ 397 (526)
T 3pij_A 328 MEDDGWCGQLTLPREITLGDDG-DVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIAD-DAEAVEIEMTIDL 397 (526)
T ss_dssp GGGGTEECEECCCEEEEECTTS-SEEEEECGGGGGGBSCCEEEEEEEECSSEEEEEES-CCSSEEEEEEEET
T ss_pred CCCCCccceEEeCEEEEEEeCC-cEEEeecHHHHHhhhCcccccceEeccCCceEecC-CCcEEEEEEEEEE
Confidence 7789999999999999998777 59999999999999998877777776554443432 3466677665554
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-84 Score=677.54 Aligned_cols=337 Identities=25% Similarity=0.438 Sum_probs=281.3
Q ss_pred CCCcccceeeecCCCCccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCe
Q 014058 51 NQPYLTSYHFRPPQNWINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC 128 (431)
Q Consensus 51 ~~~~Rp~~H~~p~~gw~NDPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv 128 (431)
.+.|||+|||+|+.||||||||++|+ +|+|||||||+|.++.||.+|+||||+|+|||||+++|+||.|+. |.+||
T Consensus 6 ~~~~Rp~~H~~P~~gwmNDPNG~~y~~~~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DLvhW~~~~~aL~P~~--d~~G~ 83 (509)
T 3kf3_A 6 SEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEH--DNEGI 83 (509)
T ss_dssp HHHHSCSSSCCCSSEEEEEEEEEEEETTTTEEEEEEEEETTCSSCCSSBEEEEEEESSSSSCEECSCCBCCSS--TTCEE
T ss_pred cccccccEeecCCcCCeeCCcceEEeCCCCEEEEEEecCCCCCCCCCcCEEEEEEccCCCCcEECcccccccc--cCCCE
Confidence 36799999999999999999999998 499999999999999999339999999999999999999999986 77899
Q ss_pred EeecEEEccC-------------CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCC
Q 014058 129 WSGSVTILPG-------------DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDP 195 (431)
Q Consensus 129 ~SGsav~~~d-------------g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP 195 (431)
|||||+++.+ |+++++|||+. ...|.|++|+|+|++ .+|+|++.||||.. ...+||||
T Consensus 84 ~SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~-~~~q~q~lA~S~D~g----~~~~k~~~nPVi~~----~~~~fRDP 154 (509)
T 3kf3_A 84 FSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNI-PDNQTQDIAFSLDGG----YTFTKYENNPVIDV----SSNQFRDP 154 (509)
T ss_dssp EEEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEE-TTEEEEEEEEESSSS----SSCEECTTCCSBCC----SCSSCEEE
T ss_pred EeceEEEeCCccccccccccCCCCceEEEECCCC-CCCeeEEEEEECCCC----cceEEcCCCceEcC----CCCcccCC
Confidence 9999998643 57999999976 367999999999964 69999988999953 24799999
Q ss_pred eEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeE
Q 014058 196 TTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHV 275 (431)
Q Consensus 196 ~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~v 275 (431)
+|+|++++|+|+|++|++. .|+|++|+|+||++|++.+.+.. +..+.||||||||+|+.+| ..+.|||
T Consensus 155 kVfw~~~~g~w~Mv~g~~~--~g~i~ly~S~DL~~W~~~~~~~~-~~~G~mwECPdlf~l~~~~---------~~~~k~v 222 (509)
T 3kf3_A 155 KVFWHEDSNQWIMVVSKSQ--EYKIQIFGSANLKNWVLNSNFSS-GYYGNQYECPGLIEVPIEN---------SDKSKWV 222 (509)
T ss_dssp EEEEETTTTEEEEEEEEGG--GTEEEEEEESSSSSCEEEEEECC-BCCCSCEEEEEEEEEEBTT---------SSCEEEE
T ss_pred eEEEECCCCEEEEEEEECC--CCEEEEEECCCCCCceEcccccc-CCccceeECCeEEEECccC---------CCCceEE
Confidence 9988877899999998643 57899999999999999987655 4566799999999998654 2346999
Q ss_pred EEEeeCC-----CCeeeEEEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCC
Q 014058 276 LKTSLFS-----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDD 349 (431)
Q Consensus 276 l~~s~~~-----~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~ 349 (431)
|++|.++ ...++|++|+||+. +|+|+.. ..++||+|+ |||+|||.+ +++|||+||||++|++....
T Consensus 223 L~~s~~~~~p~g~~~~~Y~vG~~d~~--~f~~~~~-----~~~~lD~G~DfYA~qtf~~-~~grri~igWm~~~~~~~~~ 294 (509)
T 3kf3_A 223 MFLAINPGSPLGGSINQYFVGDFDGF--QFVPDDS-----QTRFVDIGKDFYAFQTFSE-VEHGVLGLAWASNWQYADQV 294 (509)
T ss_dssp EEEEECSCCTTSSCEEEEEEEEECSS--CEEESSC-----BCEESCCSSSCEEEEECBS-CSSSEEEEEECSCTTTTTTS
T ss_pred EEEccCCCCCCCCCceEEEEEEEeCC--EEEecCc-----cceeeccCCcceeeceeeC-CCCCEEEEEecCCcccccCC
Confidence 9998753 35689999999975 8998763 257899999 999999954 47999999999999877666
Q ss_pred CCCCccccccccEEEEEecC--C-----CeEEecchH-HHHhhhccceeccceeeCCCceEEec--ccccceEEEEEEEE
Q 014058 350 IDKGWSGVQTVPRAIWLDKS--G-----KQLVQWPVE-EIETLRGKQVSIHDKELGSGSIVEVS--GITASQVNSFHCIL 419 (431)
Q Consensus 350 ~~~gW~g~lslPR~L~l~~~--G-----~~L~q~Pv~-el~~Lr~~~~~~~~~~l~~~~~~~l~--~~~~~~~~~~~~~~ 419 (431)
.+.+|+|||||||||+|++. | .+|+|+||+ ||++||.+.. +.+..++.+..+.+. +.. .+++++++|+
T Consensus 295 p~~~W~g~~tlPRel~l~~~~~~~~~~~~~L~q~Pv~~el~~lr~~~~-~~~~~~~~~~~~~~~~~~~~-~~~el~~~~~ 372 (509)
T 3kf3_A 295 PTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLK-KKNVKLTNKKPIKTNFKGST-GLFDFNITFK 372 (509)
T ss_dssp SCCSEECCBCCCEEEEEEEEESSSSCEEEEEEEEECCCTTSEEEEEEE-EEEEECCTTSCEECCCSCCC-SEEEEEEEEE
T ss_pred CCCCcccccccCEEEEEEecccCCCCCccEEEEEEcHHHHHHhhCcce-ecceEecCCceeEEecCCCC-ceEEEEEEEe
Confidence 67899999999999999861 1 279999999 9999996654 666677666554433 332 3566666554
Q ss_pred E
Q 014058 420 L 420 (431)
Q Consensus 420 ~ 420 (431)
+
T Consensus 373 ~ 373 (509)
T 3kf3_A 373 V 373 (509)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-84 Score=679.10 Aligned_cols=342 Identities=26% Similarity=0.510 Sum_probs=280.7
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCe-
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSC- 128 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv- 128 (431)
.+++|||+|||+|+.||||||||++|++|+|||||||||+++.|| +|+||||+|+|||||+++|+|| | |.+||
T Consensus 24 ~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg-~~~WgHa~S~DLvhW~~~~~aL-~----d~~g~~ 97 (516)
T 3sc7_X 24 QSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWG-NICWGHATSTDLMHWAHKPTAI-A----DENGVE 97 (516)
T ss_dssp CCSTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTCSTTC-CCEEEEEEESSSSSCEEEEEEE-C----CBTTEE
T ss_pred cCCCccccEeecCCcCCcCCCeeeEEECCEEEEEEeCCCCCCccC-CCEEEEEEeCCCCcceecCccc-c----CCCCce
Confidence 557899999999999999999999999999999999999999999 9999999999999999999999 4 34565
Q ss_pred -EeecEEEccCC----------eEEEEEeeccC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCC----CCC-CCC
Q 014058 129 -WSGSVTILPGD----------KPFILYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN----GVK-DDM 191 (431)
Q Consensus 129 -~SGsav~~~dg----------~~~l~YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~----~~~-~~~ 191 (431)
|||||++++++ .+++||||+.. .+.|.|++|+|+|.+ ++|+|+++||||.+++ ++. ..+
T Consensus 98 ~~SGSav~~~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g----~~w~k~~~nPVi~~~~~~~~~~~~~~~ 173 (516)
T 3sc7_X 98 AFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLE 173 (516)
T ss_dssp EEEEEEEECTTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTT----SCCEECTTCCSBCHHHHTTTCTTSSSS
T ss_pred eEeceEEEeCCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCC----ceEEEcCCCceEcCCCcccccccCCCc
Confidence 99999987554 48999999864 367999999999864 7999998899995432 221 248
Q ss_pred ccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCC-----CCceeeCcEEEeccCCccceecc
Q 014058 192 FRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQE-----TGMWECPDIFPVSINGTIGVDTS 266 (431)
Q Consensus 192 ~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~-----~~~wECPdlf~l~~~g~~~~~~~ 266 (431)
||||+|+|++++|+|+|++|++ ..|+|++|+|+||++|++.+.+...... ++||||||||+|+.+|.
T Consensus 174 fRDPkV~~~~~~g~w~mv~g~~--~~~~i~ly~S~DL~~W~~~~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~------ 245 (516)
T 3sc7_X 174 SRDPKVFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT------ 245 (516)
T ss_dssp CEEEEEEEETTTTEEEEEEECB--TTCEEEEEEESSSSSCEEEEEEEGGGSTTCCTTCCCBCCCEEEEEECSSS------
T ss_pred ccCCeEEEECCCCeEEEEEEEC--CCCEEEEEECCCCCCceEcccccccCCCCcccccceEECCcEEEecccCC------
Confidence 9999988877789999999864 3568999999999999999865433222 25999999999986552
Q ss_pred cCCCCeeeEEEEeeCC-----CCeeeEEEeeecCCCCeeecCCCCCCCCCceecccCC-Ccccceeec--CCCCeEEEEE
Q 014058 267 VLNPGVKHVLKTSLFS-----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFD--SAKNRRVLWA 338 (431)
Q Consensus 267 ~~~~~~k~vl~~s~~~-----~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d--~~~grri~~g 338 (431)
.+.||||++|.++ ...++|++|+||++ +|+++... ...++||+|+ |||+|||.+ ..++|||+||
T Consensus 246 ---~~~k~VL~~s~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~---~~~~~lD~G~DfYA~qtf~~~~~~~gRri~w~ 317 (516)
T 3sc7_X 246 ---EETTWVVMMTPAEGSPAGGNGVLAITGSFDGK--SFTADPVD---ASTMWLDNGRDFDGALSWVNVPASDGRRIIAA 317 (516)
T ss_dssp ---SCEEEEEEECCSSCCTTSSSCCEEEEEEECSS--CEEECCCC---TTTSBSCSSSSCEEEEECBSCCTTTCCCEEEE
T ss_pred ---CCceEEEEECCCCCCCCCCCceEEEEEEccCC--eeEeCCCC---ccceeEEcCCCccccccccCCcCCCCCEEEEE
Confidence 2459999999864 24679999999986 78776421 1246899999 999999974 3468999999
Q ss_pred eccCCCCCCCCCCCCccccccccEEEEEec-CC-CeEEecchHHHHhhhccceeccceeeCCCceEEecccccceEEEEE
Q 014058 339 WANESDSTQDDIDKGWSGVQTVPRAIWLDK-SG-KQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVNSFH 416 (431)
Q Consensus 339 W~~~~~~~~~~~~~gW~g~lslPR~L~l~~-~G-~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~ 416 (431)
||++++... ++.+|+|+|||||||+|++ +| .+|+|+||+||++||++...+.+..+..++.+ +.++.+.++++++
T Consensus 318 w~~~~~~~~--pt~gW~g~ltlPRel~l~~~~~~~~L~q~Pv~El~~Lr~~~~~~~~~~~~~~~~~-l~~~~~~~~el~~ 394 (516)
T 3sc7_X 318 VMNSYGSNP--PTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVRV 394 (516)
T ss_dssp EECCSTTCS--SCSSEECEECCCEEEEEEEETTEEEEEEEECGGGGGGEEEEEEEEEEEECTTCCB-STTCCCSSEEEEE
T ss_pred ECCCccCCC--CCCCcccccccCEEEEEEecCCceEEEeCCHHHHHhhhccceeecceEecCCceE-ccCCCceEEEEEE
Confidence 998876433 4579999999999999985 33 37999999999999998877777777766543 6667778888888
Q ss_pred EEEE
Q 014058 417 CILL 420 (431)
Q Consensus 417 ~~~~ 420 (431)
+|.+
T Consensus 395 ~~~~ 398 (516)
T 3sc7_X 395 AFYP 398 (516)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7764
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-83 Score=674.85 Aligned_cols=348 Identities=28% Similarity=0.494 Sum_probs=286.0
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceeccccc----CCCCccCC
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL----CPSGPYDI 125 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL----~P~~~~D~ 125 (431)
++++|||+|||+|+.||||||||++|++|+|||||||+|.++.|| +++||||+|+||+||+++|+|| .|+ +|.
T Consensus 3 ~~~~~Rp~~H~~P~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~wg-~~~WgHa~S~Dlv~W~~~~~al~~~g~P~--~d~ 79 (518)
T 1y4w_A 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWG-NISWGHAISEDLTHWEEKPVALLARGFGS--DVT 79 (518)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSC-SCEEEEEEESSSSSCEEEEEEECCBTTTS--CCC
T ss_pred CCCCccccEeeeCCcCceECCCcceEECCEEEEEEeeCCCCCCCC-CcEEEEEEeCCCccEEECCceEecCCCCC--CCC
Confidence 568899999999999999999999999999999999999999999 9999999999999999999999 765 467
Q ss_pred CCeEeecEEEccCC----------eEEEEEeeccCC------------CceeEEEEEecCCCCCccceeeee-cCCcEEc
Q 014058 126 NSCWSGSVTILPGD----------KPFILYTGIDAS------------GQQVQNLAMPENLSDPLLKDWVKF-SGNPVMT 182 (431)
Q Consensus 126 ~gv~SGsav~~~dg----------~~~l~YTg~~~~------------~~~~q~lA~S~D~~d~~l~~w~k~-~~~Pvi~ 182 (431)
.|||||||+++++| +++|||||+... ..|+|++|+|+|++ ++|+|+ ++||||.
T Consensus 80 ~g~~SGsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g----~~w~k~~~~~pvi~ 155 (518)
T 1y4w_A 80 EMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIP 155 (518)
T ss_dssp BEEEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBC
T ss_pred CceEeeeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCC----ceEEEcCCCCCeEe
Confidence 89999999987655 899999998642 25899999999964 799998 7899997
Q ss_pred CCCC---CCCCCccCCeEEEecCCCeEEEE--EeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEecc
Q 014058 183 PPNG---VKDDMFRDPTTAWQAPDGRWRVL--VGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI 257 (431)
Q Consensus 183 ~p~~---~~~~~~RDP~Vv~~~~~g~~~M~--~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~ 257 (431)
+++. ....+||||+|+|.+++|+|+|+ +|++ ..|++|+|+||++|++.+.+......++||||||||+|.+
T Consensus 156 ~~~~~y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~----~~i~ly~S~DL~~W~~~~~~~~~~~~~~mwECPdlf~l~~ 231 (518)
T 1y4w_A 156 NPPSPYEAEYQNFRDPFVFWHDESQKWVVVTSIAEL----HKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPL 231 (518)
T ss_dssp SCCTTCGGGTTSEEEEEEEEETTTTEEEEEEEEGGG----TEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEB
T ss_pred cCCcccccCCCCcCCCcEeEECCCCcEEEEEEecCC----CeEEEEECCCCCCCeECccccccCCCCCeEECCeEEEeec
Confidence 6542 24689999998877668999999 6654 2589999999999999886554344578999999999965
Q ss_pred CCccceecccCCCCeeeEEEEeeCC-------CCeeeEEEeeecCCCCeeecCCCCC--CCCCceecccCC-Ccccceee
Q 014058 258 NGTIGVDTSVLNPGVKHVLKTSLFS-------DKHDYYVLGTYDPQMDIFSPDTDFH--GNSNDLRYDYGK-FYASKTFF 327 (431)
Q Consensus 258 ~g~~~~~~~~~~~~~k~vl~~s~~~-------~~~~~Y~vG~~d~~~~~f~p~~~~~--~~~~~~~lD~G~-fYA~qtf~ 327 (431)
+|. .+.||||++|.++ ...++|++|+||++ +|+|+.... ....+++||+|+ |||+|||.
T Consensus 232 ~g~---------~~~k~vL~~s~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~ 300 (518)
T 1y4w_A 232 DSG---------NSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYN 300 (518)
T ss_dssp TTS---------SCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECB
T ss_pred CCC---------CceeEEEEeccCCCCccccccCCcEEEEEEeeCC--EEEeCCcccccccccceEEccCCCCccccccc
Confidence 441 2459999999854 34789999999985 799885211 112368999998 99999999
Q ss_pred cCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEEEec-CC-CeEEecchHHHHhhhccceeccceeeCCCceEEec
Q 014058 328 DSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDK-SG-KQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVS 405 (431)
Q Consensus 328 d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~l~~-~G-~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~ 405 (431)
+.+++|||+||||++|++.....+.+|+|+|||||||+|++ +| .+|+|+||+||++||++++.+.+..++.++.+.+.
T Consensus 301 d~~~gRri~~gWm~~~~~~~~~pt~gW~g~ltlPRel~l~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~~~~~ 380 (518)
T 1y4w_A 301 GLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNT 380 (518)
T ss_dssp SCCGGGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEECSCGGGTBCSSCSEEEEEEEECSEECCC
T ss_pred cCCCCCEEEEEecCCCccccccCCCCcCcccccCeEEEEEecCCcCeEEEeehHHHHhhhccceeccceeeccccceeec
Confidence 85579999999999998765555689999999999999985 33 37999999999999998776665555555444555
Q ss_pred ccccceEEEEEEEE
Q 014058 406 GITASQVNSFHCIL 419 (431)
Q Consensus 406 ~~~~~~~~~~~~~~ 419 (431)
+..+.+++++++|.
T Consensus 381 ~~~~~~~el~~~~~ 394 (518)
T 1y4w_A 381 TTTGETFKVDLSFS 394 (518)
T ss_dssp EECCSSEEEEEEEE
T ss_pred CCCCeEEEEEEEEe
Confidence 55666777766665
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-81 Score=654.82 Aligned_cols=308 Identities=25% Similarity=0.454 Sum_probs=261.5
Q ss_pred ccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEE
Q 014058 55 LTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVT 134 (431)
Q Consensus 55 Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav 134 (431)
.|+|||+|+.||||||||++|++|+|||||||+|+++.|| + ||||+|+|||||+++|+||.|+. ..|||||||+
T Consensus 1 ~P~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~~g-~--WgHa~S~DLvhW~~~~~aL~P~~---~~g~~SGSav 74 (492)
T 4ffh_A 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPG-G--WDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAV 74 (492)
T ss_dssp -CCSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSTTCCC-E--EEEEEESSSSSCEEEEEEECCBT---TBCCCCEEEE
T ss_pred CCcEeEcCCCCCeeCCeeeEEECCEEEEEEECCCCCCCCC-c--EEEEEeCCCCccEECCCCCCCCC---CCCEEeceEE
Confidence 4899999999999999999999999999999999999999 6 99999999999999999999975 5899999999
Q ss_pred EccCCe-------EEEEEeeccC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCC------------cc
Q 014058 135 ILPGDK-------PFILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDM------------FR 193 (431)
Q Consensus 135 ~~~dg~-------~~l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~------------~R 193 (431)
++++|+ ++|+|||+.. .+.|.|++|+|+|++ ++|+|+ +||||.+|.. .+ ||
T Consensus 75 ~~~~~~~g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g----~~w~k~-~nPvi~~p~~---~~~~~~~~~~~~~~fR 146 (492)
T 4ffh_A 75 VDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG----FTFTAL-PDPVIVNTDG---RAATTPAEIENAEWFR 146 (492)
T ss_dssp EETTCSSSSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSS----SSCEEC-SSCSBCCTTT---TTCCSHHHHHHHTCEE
T ss_pred EeCCCccccCCCcEEEEEeecccCCCCcEEEEEEEeCCCC----ceEEEc-CccccCCCCc---cccccccccccCCCCc
Confidence 876664 9999999864 367999999999964 799999 7999976532 35 99
Q ss_pred CCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCee
Q 014058 194 DPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVK 273 (431)
Q Consensus 194 DP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k 273 (431)
||+|+|.+++|+|+|++ ++ .++|++|+|+||++|++.+.+......++||||||||+|+.++ ++.|
T Consensus 147 DP~V~~~~~~g~w~mv~-a~---~~~i~ly~S~DL~~W~~~~~~~~~~~~g~mwECPdlf~l~~~~----------~~~k 212 (492)
T 4ffh_A 147 DPKIHWDTARGEWVCVI-GR---LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRH 212 (492)
T ss_dssp EEEEEEETTTTEEEEEE-EE---TTEEEEEEESSSSSCEECCCEECSCGGGCCCEEEEEEEEECTT----------SCEE
T ss_pred CCEEEEECCCCEEEEEE-EC---CCeEEEEECCCCCCceEeccccccCCccceEECCeEEEECCCC----------CCce
Confidence 99987776789999999 43 3689999999999999998765544457899999999998432 2469
Q ss_pred eEEEEeeCC-----CCeeeEEEeeecCCCCeeecCCCCCCCCCceecccCC-Ccccceee--cCCCCeEEEEEeccCCCC
Q 014058 274 HVLKTSLFS-----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFF--DSAKNRRVLWAWANESDS 345 (431)
Q Consensus 274 ~vl~~s~~~-----~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~--d~~~grri~~gW~~~~~~ 345 (431)
|||++|.++ ...++|++|+||+ .+|+|+.. .+++||+|+ |||+|||. +.+++|||+||||++|++
T Consensus 213 ~vL~~s~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~~grri~~gW~~~~~~ 285 (492)
T 4ffh_A 213 WVLAASMDAYGIGLPMTYAYWTGTWDG--EQFHADDL-----TPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWKY 285 (492)
T ss_dssp EEEEEECCCGGGTCCSSEEEEEEEECS--SCEEESCS-----SCEESCCSSCCEEEEEEECSSCTTTCEEEEEECCCTTT
T ss_pred EEEEEccCCCCCCCccceEEEEEEeeC--CEEEeCCC-----CccceeeCCCcccCCeEccCCCCCCCEEEEEecCCCcc
Confidence 999999754 4568999999996 48998853 257999999 99999999 345799999999999986
Q ss_pred C---CCCC-CCCccccccccEEEEEec-CC--CeEEecchHHHHhhhccceeccceeeC
Q 014058 346 T---QDDI-DKGWSGVQTVPRAIWLDK-SG--KQLVQWPVEEIETLRGKQVSIHDKELG 397 (431)
Q Consensus 346 ~---~~~~-~~gW~g~lslPR~L~l~~-~G--~~L~q~Pv~el~~Lr~~~~~~~~~~l~ 397 (431)
. .++. ..||+|+|||||||+|++ +| .+|+|+||+||++||++++.+.+..+.
T Consensus 286 ~~~~~pt~~~~gW~g~~tlPRel~l~~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~ 344 (492)
T 4ffh_A 286 AARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVD 344 (492)
T ss_dssp CSSCCHHHHHHSEECCBCCCEEEEEEECTTSCEEEEEEECGGGGGGEEEEEEECCEEES
T ss_pred ccccCCcccccCcccccccCEEEEEEEcCCCeeEEEEeehHHHHHhhccceeecceecc
Confidence 4 2222 378999999999999984 23 379999999999999988777665554
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-78 Score=646.45 Aligned_cols=314 Identities=20% Similarity=0.302 Sum_probs=260.1
Q ss_pred CCCCcccceeeecCCCCccCCCcceE--ECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceec----ccccCCCCcc
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMY--YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL----SHALCPSGPY 123 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~--~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~----~~aL~P~~~~ 123 (431)
..++|||+|||+|+.||||||||++| ++|+|||||||||. | ||||+|+|||||+++ |+||.|+..+
T Consensus 22 ~~~~~Rp~~H~~p~~gwmNDPnG~~yD~~~G~YHlFYQ~~P~----g----WgHa~S~DLvhW~~~~~~~~~aL~P~~~~ 93 (634)
T 3lig_A 22 LFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGD----G----IAGATTANLATYTDTSDNGSFLIQPGGKN 93 (634)
T ss_dssp TTTTSCCSSSCCCSSEEEEEECCCEECTTTCCEEEEEEETTS----C----EEEEEESSSSCCEESCSTTCEEECSCSSS
T ss_pred cccccCccEeEcCCCCcccCCccceEeCCCCEEEEEEecCCC----c----eeEEEecCcCceeECcCCCCceecCCCCC
Confidence 56889999999999999999999999 89999999999993 4 999999999999999 8999999999
Q ss_pred CCCCeEeecEEEc-cCCeEEEEEeeccC----------CCceeEEEEEecCCCCCccceeeeecCCcEEc-CCCCCCCCC
Q 014058 124 DINSCWSGSVTIL-PGDKPFILYTGIDA----------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMT-PPNGVKDDM 191 (431)
Q Consensus 124 D~~gv~SGsav~~-~dg~~~l~YTg~~~----------~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~-~p~~~~~~~ 191 (431)
|.+|||||||+++ .+|+++|||||+.+ .+.|.|++|+|+|++ ++|+|++.||||. +|.+++..+
T Consensus 94 D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~g----~~w~K~~~nPVi~~~p~g~~~~~ 169 (634)
T 3lig_A 94 DPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDGG----RRFDKLDQGPVIADHPFAVDVTA 169 (634)
T ss_dssp CSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGGG----TEEEECSSSCSBCSSSTTCCEEE
T ss_pred CCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCCC----CEEEECCCCceEcCCCcccCCCc
Confidence 9999999999874 37899999999852 246899999999853 7999998899996 456666789
Q ss_pred ccCCeEEE----------------------------ecCCCeEEEEEeeee-CCcceEEEEE--eCC---CCCcEEcccc
Q 014058 192 FRDPTTAW----------------------------QAPDGRWRVLVGGQI-DNEGMAFVYW--SWD---FIHWTKLDHP 237 (431)
Q Consensus 192 ~RDP~Vv~----------------------------~~~~g~~~M~~ga~~-~~~G~i~ly~--S~D---l~~W~~~~~~ 237 (431)
||||||+| .+++|+|||++|++. +..|+|+||+ |+| |++|++.+.+
T Consensus 170 fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~lY~~~s~dd~~l~~W~~~g~l 249 (634)
T 3lig_A 170 FRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLGEW 249 (634)
T ss_dssp EEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEEEEEGGGCTTCCSCEEEEEEE
T ss_pred cCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEEEEeCCCCccccCCceEeccc
Confidence 99999766 125789999999987 4578999999 788 9999999865
Q ss_pred ccc-------------CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCC-----------CeeeEEEeee
Q 014058 238 LYS-------------VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD-----------KHDYYVLGTY 293 (431)
Q Consensus 238 l~~-------------~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~-----------~~~~Y~vG~~ 293 (431)
... +..+.||||||||+|+..|.. ....+|||++|.++. ....|++|+|
T Consensus 250 ~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~-------~~~~~~vl~~~~~g~~~~~~~~~~~~~~~~y~~G~~ 322 (634)
T 3lig_A 250 WQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHD-------PQTGEVFVTLGTEGSGLPIVPQVSSIHDMLWAAGEV 322 (634)
T ss_dssp EECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBC-------TTTSEEEEEEEEEECCSSCCTTCCCEEEEEEEEEEE
T ss_pred ccccccccccccccccCceeeEEECCCEEEECCcccC-------CCCCcEEEEECCCCCCCccccccccccccEEEEEEE
Confidence 321 234679999999999954310 012489999887421 2567999999
Q ss_pred --cCC----CCeeecCCCCCCCCCceecccCC-CcccceeecCC----------C-CeEEEEEeccCCCCC----CCCCC
Q 014058 294 --DPQ----MDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA----------K-NRRVLWAWANESDST----QDDID 351 (431)
Q Consensus 294 --d~~----~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~----------~-grri~~gW~~~~~~~----~~~~~ 351 (431)
+++ +.+|+|+. .++||+|+ |||+|||.++. + |||||||||++|++. .++.+
T Consensus 323 ~~d~~~~~~~~~f~~~~-------~~~lD~G~dfYA~qtf~~~~~~~~~~~~~~~~gRri~igWm~~~~~~~~~~~pt~~ 395 (634)
T 3lig_A 323 GVGSEQEGAKVEFSPSM-------AGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVSFVWLTGDQYEQADGFPTAQ 395 (634)
T ss_dssp EECTTSSSCSEEEEEEE-------EEEEECCTTEEEEEEEEECTTSHHHHHHTCCSCEEEEEEEECSSTTTTCSSCCHHH
T ss_pred ecCcccccCceeEecCC-------ccccccCcCceecceecccccccccccccCCCCCEEEEEeCCCCcccccccCCCCC
Confidence 443 46887764 57899999 99999999863 2 999999999999864 23456
Q ss_pred CCccccccccEEEEEe-----cCC----------------------CeEEecchHHH-Hhhhccce
Q 014058 352 KGWSGVQTVPRAIWLD-----KSG----------------------KQLVQWPVEEI-ETLRGKQV 389 (431)
Q Consensus 352 ~gW~g~lslPR~L~l~-----~~G----------------------~~L~q~Pv~el-~~Lr~~~~ 389 (431)
.||+|||||||||+|+ ++| .+|.|+||+|| ++||+++.
T Consensus 396 ~gW~g~ltlPReL~l~~~~~v~~~~l~~~~~~s~~~~~~~~G~~t~~~L~q~Pv~El~~~Lr~~~~ 461 (634)
T 3lig_A 396 QGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGS 461 (634)
T ss_dssp HSEECEECCCEEEEEEEEEEEECSHHHHCSSCSCEEEEECSSEEEEEEEEEEECHHHHHHHHHTCE
T ss_pred CCCccccccCEEEEEEEecCccCccccccccccceeccccCCccccCEEEEeecHHHHHHhhccce
Confidence 8999999999999995 122 27999999999 89998764
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-77 Score=617.92 Aligned_cols=322 Identities=31% Similarity=0.611 Sum_probs=275.2
Q ss_pred CcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeec
Q 014058 53 PYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGS 132 (431)
Q Consensus 53 ~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGs 132 (431)
+|||+|||+|+.||||||||++|++|+||||||++|.++.|| +++||||+|+||+||+++++||.|+.. ..||||||
T Consensus 1 ~~Rp~~H~~p~~gw~nDPng~~~~~G~yhlfyq~~p~~~~~g-~~~wgha~S~Dlv~W~~~~~aL~p~~~--~~g~~sgs 77 (432)
T 1w2t_A 1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWG-NICWGHAVSDDLVHWRHLPVALYPDDE--THGVFSGS 77 (432)
T ss_dssp CCSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSCC-SCEEEEEEESSSSSCEEEEEEECCSST--TEEEEEEE
T ss_pred CCCcCCcccCCCCCeECCCcCeEECCEEEEEEecCCCCCCCC-CcEEEEEEcCCCcCeEECCccCCCCCC--CCCEEeeE
Confidence 489999999999999999999999999999999999999999 999999999999999999999999876 57999999
Q ss_pred EEEccCCeEEEEEeeccC-----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEE
Q 014058 133 VTILPGDKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWR 207 (431)
Q Consensus 133 av~~~dg~~~l~YTg~~~-----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~ 207 (431)
|++ ++|+++|+|||+.. ...+.|++|+|+|+ .+|+|++.+||+..+++....+||||+| |+ ++|+||
T Consensus 78 av~-~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~V-f~-~dg~~~ 149 (432)
T 1w2t_A 78 AVE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWR 149 (432)
T ss_dssp EEE-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-CSSSEE
T ss_pred EEE-ECCEEEEEEecCccCCCCCCceEEEEEEEeCCC-----CeEEecCCCceEeCCCccccccccCCEE-EE-ECCEEE
Confidence 987 59999999999764 24689999999985 5899987899996543333679999995 66 389999
Q ss_pred EEEeeee-CCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCee
Q 014058 208 VLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHD 286 (431)
Q Consensus 208 M~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~ 286 (431)
|++|++. +..|+|.+|+|+||++|++.+.+..... ++|||||+||+++ | ||||++|.++...+
T Consensus 150 m~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~-g~~~EcP~lf~~~--g-------------~~vL~~s~~g~~~~ 213 (432)
T 1w2t_A 150 MVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDET-TKEIDCPDLVRIG--E-------------KDILIYSITSTNSV 213 (432)
T ss_dssp EEEEEEETTTEEEEEEEEESSSSSCEEEEEEEEETT-CSCCEEEEEEEET--T-------------EEEEEEEETTTTEE
T ss_pred EEEEEecCCCCcEEEEEECCCCCCceEccccccCCC-CCEEECCeEEEEC--C-------------EEEEEEeCCCCcce
Confidence 9999885 4578999999999999999886554433 6799999999997 5 99999999877788
Q ss_pred eEEEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCC--CCCCCCCCccccccccEE
Q 014058 287 YYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDS--TQDDIDKGWSGVQTVPRA 363 (431)
Q Consensus 287 ~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~--~~~~~~~gW~g~lslPR~ 363 (431)
.|++|+|| + ..|.++. ++++|+|+ |||+|||.++ + |||+||||+++++ ..++.+.+|+|+|||||+
T Consensus 214 ~Y~~G~~d-~-~~~~~~~-------~~~lD~G~dfYA~qtf~~~-~-rri~~gW~~~~~~~~~~pt~~~gW~g~~tlPR~ 282 (432)
T 1w2t_A 214 LFSMGELK-E-GKLNVEK-------RGLLDHGTDFYAAQTFFGT-D-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRE 282 (432)
T ss_dssp EEEEEEEE-T-TEEEEEE-------EEESCCSSSCEEEEECBSC-S-SEEEEEESSCTTTGGGCCGGGGTEECCBCCCEE
T ss_pred EEEEEEec-C-CEEcCCc-------cceeccCCCccccceecCC-C-CEEEEEEecCcccccccCcccCCCcCceeccEE
Confidence 99999999 5 4665543 67999998 9999999986 4 9999999999987 455557899999999999
Q ss_pred EEEecCCCeEEecchHHHHhhhccceeccceeeCCCceEEecccccceEEEEEEEE
Q 014058 364 IWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVNSFHCIL 419 (431)
Q Consensus 364 L~l~~~G~~L~q~Pv~el~~Lr~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 419 (431)
|+|+ +| +|+|+|++||++||++++.+.+ .+ + .++.++.+.+++++++|.
T Consensus 283 l~l~-~g-~L~q~Pv~el~~lr~~~~~~~~-~~--~--~~~~~~~~~~~e~~~~~~ 331 (432)
T 1w2t_A 283 LYVE-NN-ELKVKPVDELLALRKRKVFETA-KS--G--TFLLDVKENSYEIVCEFS 331 (432)
T ss_dssp EEEE-TT-EEEEEECGGGGGGEEEEEEEES-SC--E--EEECCCSSSCEEEEEEEE
T ss_pred EEEe-CC-EEEEEEcHHHHHhhccceeccc-cc--e--eEecCCCCeEEEEEEEEe
Confidence 9996 77 7999999999999998765543 22 1 455666667777777654
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-32 Score=280.90 Aligned_cols=267 Identities=13% Similarity=0.125 Sum_probs=183.6
Q ss_pred ccCC-CcceE-ECCEEEEEEE-ECCCCCCCCCcceEEEEEeC----CCccceecccccCCCCccCCCCeEeecEEEccCC
Q 014058 67 INDP-NGPMY-YKGVYHLFYQ-YNPLGPLFGDKMIWAHSVSY----DLINWIHLSHALCPSGPYDINSCWSGSVTILPGD 139 (431)
Q Consensus 67 ~NDP-nG~i~-~~G~YHlFyq-~~P~~~~wg~~~~WgHa~S~----Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg 139 (431)
++|| +|.++ ++|.+|+|++ ..|+ ++ ..||.|+.++ ||+||++.|+++.|+.++ .|||||||++..||
T Consensus 133 l~D~~~G~v~~~~G~~vvf~L~~dP~---~~-d~Hi~~~ys~~g~~DLvhW~~~G~~~~~~~~~--~g~WSGSAi~~~DG 206 (571)
T 2yfr_A 133 VQDAKTGYVSNWNGYQLVIGMMGVPN---VN-DNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPV--IQQWSGSATLNKDG 206 (571)
T ss_dssp BBCTTTCCBCCBTTEEEEEEEEECTT---SC-CCEEEEEEEETTCCCGGGCEEEEETTCSCCTT--EEEEEEEEEECTTS
T ss_pred EEecCCCcEEEecCceEEEEEccCCC---CC-CcEEEEEECcCCccccCCccCCCeEcCCCCCC--CceECCeeEECcCC
Confidence 3677 78777 7899999999 5565 56 8999999998 679999999999886433 79999999985699
Q ss_pred eEEEEEeeccCC--CceeEEEEE-----e----cCCCCCccceeeeecCCcEEcCCC--------------CCCCCCccC
Q 014058 140 KPFILYTGIDAS--GQQVQNLAM-----P----ENLSDPLLKDWVKFSGNPVMTPPN--------------GVKDDMFRD 194 (431)
Q Consensus 140 ~~~l~YTg~~~~--~~~~q~lA~-----S----~D~~d~~l~~w~k~~~~Pvi~~p~--------------~~~~~~~RD 194 (431)
+++|||||+... +...|++|. + .|+ ..+..|++. .+++.+++ +.+..+|||
T Consensus 207 ~l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dg--v~~~kw~~~--~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRD 282 (571)
T 2yfr_A 207 SIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDK--ISIAHVDND--HIVFEGDGYHYQTYDQWKETNKGADNIAMRD 282 (571)
T ss_dssp CEEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTE--EEEEEEEEE--EEEECCCSSSBCCHHHHHHHCSSCCCCCCEE
T ss_pred EEEEEEeccccCCCCcccceEEEEEeeeeecccCCC--cceecccCC--CceecCCCcccccccccccccccCCcccCcC
Confidence 999999997542 234555554 2 222 112344433 35554432 115689999
Q ss_pred CeEEEecCCCeEEEEEeeeeCC------------------------------------------cceEEEEEeCCC----
Q 014058 195 PTTAWQAPDGRWRVLVGGQIDN------------------------------------------EGMAFVYWSWDF---- 228 (431)
Q Consensus 195 P~Vv~~~~~g~~~M~~ga~~~~------------------------------------------~G~i~ly~S~Dl---- 228 (431)
|+| |++++|+|||++|++... .|+|.||+|+|+
T Consensus 283 P~V-f~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~~n~ 361 (571)
T 2yfr_A 283 AHV-IDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNP 361 (571)
T ss_dssp EEE-EECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCTTSC
T ss_pred CeE-EEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCcCCc
Confidence 995 664469999999998532 489999999765
Q ss_pred CCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCC-----------------eeeE-EE
Q 014058 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK-----------------HDYY-VL 290 (431)
Q Consensus 229 ~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~-----------------~~~Y-~v 290 (431)
.+|++.++++.+...+.|||||+||+++ | +|||++|....+ ...| ++
T Consensus 362 ~~We~~~pL~~~~~v~dm~EcP~lf~~d--G-------------~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~v 426 (571)
T 2yfr_A 362 SVAKVYSPLISAPMVSDEIERPDVVKLG--N-------------KYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYV 426 (571)
T ss_dssp CEEEECCCSEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEEE
T ss_pred ccceeccccccCCCcCceeecCcEEEEC--C-------------EEEEEEeCCCCcccccccccccccCcCCceEEEEEE
Confidence 5899987544333345699999999998 6 788888764211 2333 44
Q ss_pred ee-ecCCCCeeecCCC--------CCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccc
Q 014058 291 GT-YDPQMDIFSPDTD--------FHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTV 360 (431)
Q Consensus 291 G~-~d~~~~~f~p~~~--------~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lsl 360 (431)
.+ +. +.|.|-.. .+. ..+++ +. +||.++..+ .+++++++||.++... ...+|.|.++-
T Consensus 427 Sdsl~---GPy~plng~glVL~~~~P~---~~~~~-tyS~Ya~p~~~~--~~~~lv~s~i~~r~~~---~~~~~~GTlap 494 (571)
T 2yfr_A 427 SDNLT---HGYVPLNESGVVLTASVPA---NWRTA-TYSYYAVPVEGR--DDQLLITSYITNRGEV---AGKGMHATWAP 494 (571)
T ss_dssp ESSSS---SCCEETTTTSEEEECCSCT---TSTTC-EEEEEEEEETTE--EEEEEEEEEESCSTTT---TCTTCCCEECE
T ss_pred eCCCC---CCCeeCCCCceeecCCCCC---ccccc-cceeEEEecccC--CCcEEEEEEeCCcCCC---CCcccceeecC
Confidence 42 33 46665211 000 11232 33 777776543 3578899999998753 34679999997
Q ss_pred cEEEEEecCCC
Q 014058 361 PRAIWLDKSGK 371 (431)
Q Consensus 361 PR~L~l~~~G~ 371 (431)
+..|.+..||.
T Consensus 495 ~~~vq~~~dgt 505 (571)
T 2yfr_A 495 SFLLQINPDNT 505 (571)
T ss_dssp EEEEEEETTTE
T ss_pred cEEEEEcCCCC
Confidence 77788877774
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=264.49 Aligned_cols=270 Identities=16% Similarity=0.151 Sum_probs=183.4
Q ss_pred CCCccCCCcceE--------ECCEEEEEEEECCCCCCCCCcceEEEEEeC----CCccceecccccCCC------Ccc--
Q 014058 64 QNWINDPNGPMY--------YKGVYHLFYQYNPLGPLFGDKMIWAHSVSY----DLINWIHLSHALCPS------GPY-- 123 (431)
Q Consensus 64 ~gw~NDPnG~i~--------~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~----Dlv~W~~~~~aL~P~------~~~-- 123 (431)
..|+.|+. +++ ++|..++||+..+... ++ ..||+|+.|+ ||+||++.++++.+. .++
T Consensus 55 ~~~VWDsW-pl~d~~G~~~~~~g~~lif~L~~dp~~-~~-~~hi~~~ys~~g~~dl~~W~~~G~vfp~~~~~~~~~~~~~ 131 (447)
T 1oyg_A 55 GLDVWDSW-PLQNADGTVANYHGYHIVFALAGDPKN-AD-DTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILK 131 (447)
T ss_dssp TCEEEEEE-EEECTTSSBCCBTTEEEEEEEEECTTC-TT-CCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGG
T ss_pred CCcccccc-eEECCCCCEEEecCcEEEEEEcCCCCC-CC-ceEEEEEECcCCCcccCCccCCCeecCCCccccccccccC
Confidence 57877655 344 4566779998765432 45 8999999999 569999999944332 233
Q ss_pred CCCCeEeecEEEccCCeEEEEEeeccCC--CceeEEEEE-----ecCCCCCccceeeeec-CCcEEcCCCC---------
Q 014058 124 DINSCWSGSVTILPGDKPFILYTGIDAS--GQQVQNLAM-----PENLSDPLLKDWVKFS-GNPVMTPPNG--------- 186 (431)
Q Consensus 124 D~~gv~SGsav~~~dg~~~l~YTg~~~~--~~~~q~lA~-----S~D~~d~~l~~w~k~~-~~Pvi~~p~~--------- 186 (431)
+..|||||||++.+||+++|||||+... ..|++..|. ++|+ .++++.+ .++++.+++.
T Consensus 132 ~~~g~WSGSAi~~~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dg-----v~~~~~~~~~~l~~~Dg~~Yq~~~q~~ 206 (447)
T 1oyg_A 132 DQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSS-----LNINGVEDYKSIFDGDGKTYQNVQQFI 206 (447)
T ss_dssp GCCEEEEEEEEECTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSC-----EEEEEEEEEEEEECCCSSSBCCHHHHH
T ss_pred CCCCEECCceEECcCCEEEEEEEeecCCCCCceEEEEEecceeecCCC-----cceecccCCCceEcCCCcccccccccc
Confidence 3689999999986799999999997642 345544443 3332 3444432 2456654321
Q ss_pred -------CCCCCccCCeEEEecCCCeEEEEEeeeeCC------------------------------------------c
Q 014058 187 -------VKDDMFRDPTTAWQAPDGRWRVLVGGQIDN------------------------------------------E 217 (431)
Q Consensus 187 -------~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~------------------------------------------~ 217 (431)
.+..+||||+| |++ +|+|||+++++... .
T Consensus 207 ~~~~~~~~~~~~fRDP~V-f~d-~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (447)
T 1oyg_A 207 DEGNYSSGDNHTLRDPHY-VED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELAN 284 (447)
T ss_dssp HHTGGGGTCCCCCEEEEE-EEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCC
T ss_pred ccccccCCCccccCCCeE-EeE-CCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcC
Confidence 13479999995 553 79999999998632 3
Q ss_pred ceEEEE-EeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCC--------eeeE
Q 014058 218 GMAFVY-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK--------HDYY 288 (431)
Q Consensus 218 G~i~ly-~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~--------~~~Y 288 (431)
|+|.|+ .|+|+.+|++.+.++.+.....+||||++|+++ | ||||++|..... ...|
T Consensus 285 G~Igl~~~s~Dl~~W~~~~pL~~~~~v~d~~EcPdlfk~d--G-------------kyyLf~S~~~s~~~~~g~~~~~vy 349 (447)
T 1oyg_A 285 GALGMIELNDDYTLKKVMKPLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIY 349 (447)
T ss_dssp EEEEEEEECTTSSEEEEEEEEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEE
T ss_pred cEEEEEEcCCCCCCceEccccccCCCCCCceEcCcEEEEC--C-------------EEEEEEecCCCcccccCcCCCcEE
Confidence 788877 699999999976443333346689999999998 6 888888864321 2467
Q ss_pred EEeee-cCCCCeeecCC--------CCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccc
Q 014058 289 VLGTY-DPQMDIFSPDT--------DFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQ 358 (431)
Q Consensus 289 ~vG~~-d~~~~~f~p~~--------~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~l 358 (431)
++|-. +.-.+.|.|-. ..+ ....++ +. +||.++. + .+++++++||.+.... ..|.|.+
T Consensus 350 ~~g~vsdsl~GPy~plngsGlVl~~~~p---~~~~~~-~ys~ya~p~~-~--~~~~~v~sf~~~~~~~-----~~~ggtl 417 (447)
T 1oyg_A 350 MLGYVSNSLTGPYKPLNKTGLVLKMDLD---PNDVTF-TYSHFAVPQA-K--GNNVVITSYMTNRGFY-----ADKQSTF 417 (447)
T ss_dssp EEEEEESSTTCCCEEGGGTSEEEEECCC---TTCTTC-EEEEEEECCS-S--SSEEEEEEEESCTTSC-----SSCCCEE
T ss_pred EEEEEcCCCCCCCeeCCCCceeecCCCC---Cccccc-cceeEEEecC-C--CCeEEEEEEeCCCCcc-----cccceee
Confidence 66632 22245676511 000 012344 44 8998887 4 3689999999988532 4699999
Q ss_pred cccEEEEEecCC
Q 014058 359 TVPRAIWLDKSG 370 (431)
Q Consensus 359 slPR~L~l~~~G 370 (431)
+-+..|.+..++
T Consensus 418 ap~~~v~~~gd~ 429 (447)
T 1oyg_A 418 APSFLLNIKGKK 429 (447)
T ss_dssp CBCEEEEEETTE
T ss_pred cCcEEEEEcCCc
Confidence 988888887543
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=223.81 Aligned_cols=193 Identities=18% Similarity=0.296 Sum_probs=150.4
Q ss_pred CCCCcccceeeecCCC--------CccCCCcceEECCEEEEEEEECCCCC-------------CCCCcceEEEEEeCCCc
Q 014058 50 ANQPYLTSYHFRPPQN--------WINDPNGPMYYKGVYHLFYQYNPLGP-------------LFGDKMIWAHSVSYDLI 108 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~g--------w~NDPnG~i~~~G~YHlFyq~~P~~~-------------~wg~~~~WgHa~S~Dlv 108 (431)
.+..+|++||+.|..| |+||||++++++|+||||||++|... .|+ .++|+||+|+||+
T Consensus 25 ~~g~~f~~~~~~P~~g~~~~~e~~~~~DP~~v~~~dG~Yymfyt~~~~~~~G~~~~~~~~~~~~w~-~~~i~~a~S~DLv 103 (374)
T 3r4z_A 25 KGPEWLFEFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWD-KTEVWHATSKDKI 103 (374)
T ss_dssp SCSTTCEEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSCSCTTSCSSTTT-TCEEEEEEESSSS
T ss_pred CCCchHHhcccccccCCccccCCcCcCCCCeEEEECCEEEEEEEcCCCcccccccccccccccccC-ccEEEEEECCCCc
Confidence 4578999999999999 99999999999999999999986421 366 8899999999999
Q ss_pred cceecccccCCCC--ccCCCCeEeecEEEccCCeEEEEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCcEEc
Q 014058 109 NWIHLSHALCPSG--PYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT 182 (431)
Q Consensus 109 ~W~~~~~aL~P~~--~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~ 182 (431)
||++++.+|.|.. .+|..+||+|+++. .+|+++|+||+.... ..+.+++|+|+|.. ..|++. ++||+.
T Consensus 104 ~W~~~g~~l~~~~~~~~d~~gvwaPsvi~-~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~----Gpw~~~-~~Pvi~ 177 (374)
T 3r4z_A 104 TWKEIGPAIQRGAAGAYDDRAVFTPEVLR-HNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPF----GPWTKS-DAPILS 177 (374)
T ss_dssp EEEEEEEEECCCCTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCBEEEEEEESSTT----CCCEEC-SSCSBC
T ss_pred CcEeCcccCCCCCCCCccCCCEECCEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEECCCC----CCeEEC-CCCEeC
Confidence 9999999998864 67889999999987 499999999997542 34789999999863 589986 689986
Q ss_pred CCC------------------CCCCCCccCCeEEEecCCCeEEEEEeeeeCC-----c---ceEEEEEeCCCC-CcEEcc
Q 014058 183 PPN------------------GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN-----E---GMAFVYWSWDFI-HWTKLD 235 (431)
Q Consensus 183 ~p~------------------~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~-----~---G~i~ly~S~Dl~-~W~~~~ 235 (431)
+.+ .++...++||+|+ + .+|+|||++++.... . -++.+++|+++. .|+...
T Consensus 178 ~~~~~~w~~ddd~~~~~~~~~~~d~~~~~~P~v~-~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~Gpw~~~~ 255 (374)
T 3r4z_A 178 PENDGVWDTDEDNRFLVKEKGSFDSHKVHDPCLM-F-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKSE 255 (374)
T ss_dssp CCCCSEECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTTCCCEECT
T ss_pred CCcCCceeecCCceEEEecCCccccCccccceEE-E-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCCCCCEECC
Confidence 432 1234457999965 4 489999999876421 1 157888998754 698853
Q ss_pred -cccccCCCCCceeeCcEEEec
Q 014058 236 -HPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 236 -~~l~~~~~~~~wECPdlf~l~ 256 (431)
.|+.... .-|.+|+.+
T Consensus 256 ~~Pi~~~~-----~dp~V~~~~ 272 (374)
T 3r4z_A 256 YNPITNSG-----HEVAVWPYK 272 (374)
T ss_dssp TCCCCSSC-----SSCCEEEET
T ss_pred CCCEeCCC-----CCCceEEeC
Confidence 4554321 136777765
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-25 Score=224.81 Aligned_cols=193 Identities=16% Similarity=0.231 Sum_probs=146.6
Q ss_pred CCCCcccce-eeecCCC--------CccCCCcceEECCEEEEEEEECCC-------------CCCCCCcceEEEEEeCCC
Q 014058 50 ANQPYLTSY-HFRPPQN--------WINDPNGPMYYKGVYHLFYQYNPL-------------GPLFGDKMIWAHSVSYDL 107 (431)
Q Consensus 50 ~~~~~Rp~~-H~~p~~g--------w~NDPnG~i~~~G~YHlFyq~~P~-------------~~~wg~~~~WgHa~S~Dl 107 (431)
.+++|||.| |++|+.| ++|||+|+++++|+||||||++|. ...|+ .++|+||+|+||
T Consensus 69 ~~~~~~~~~~~~~p~~g~~~~~~~v~~~DP~~vi~~dG~Yylfyt~~~~~~~G~~~~~~~~~~~p~~-~~~i~~A~S~Dl 147 (408)
T 3p2n_A 69 LGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWD-RCDIWYATSEDG 147 (408)
T ss_dssp CCSTTCEEECCCEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTT-TCEEEEEEESSS
T ss_pred cCCchhhcccccCCcCCCccccCCcEeCCCCEEEEECCEEEEEEEeCCCcccccccccccccccccc-cceEEEEEcCCC
Confidence 578999999 9999999 999999999999999999998762 11255 789999999999
Q ss_pred ccceecccccCCCC--ccCCCCeEeecEEEccCCeEEEEEeeccCC---C-ceeEEEEEecCCCCCccceeeeecCCcEE
Q 014058 108 INWIHLSHALCPSG--PYDINSCWSGSVTILPGDKPFILYTGIDAS---G-QQVQNLAMPENLSDPLLKDWVKFSGNPVM 181 (431)
Q Consensus 108 v~W~~~~~aL~P~~--~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~-~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi 181 (431)
+||++++++|.|.. .+|..++|+++++. .+|+++||||+.... + ...+++|++.+.. +. |++. ++||+
T Consensus 148 v~W~~~g~~l~~~~~~~wd~~gv~aPsVi~-~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~D---G~-W~~~-~~pli 221 (408)
T 3p2n_A 148 WTWKEEGPAVTRGEKGAYDDRSVFTVEIMK-WEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPD---GP-WTKS-EEPIL 221 (408)
T ss_dssp SEEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCCEEEEEEESSTT---CC-CEEC-SSCSB
T ss_pred CeeeEeCceeCCCCCCCcccCceEeeEEEE-ECCEEEEEEEeecCCCCCcCCCceEEEEEECCC---CC-EEEC-Cccee
Confidence 99999999998864 67889999999987 599999999986421 1 3456666654431 24 9987 57887
Q ss_pred cCC------------------CCCCCCCccCCeEEEecCCCeEEEEEeeeeCC--------cceEEEEEeCCCC-CcEEc
Q 014058 182 TPP------------------NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--------EGMAFVYWSWDFI-HWTKL 234 (431)
Q Consensus 182 ~~p------------------~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~--------~G~i~ly~S~Dl~-~W~~~ 234 (431)
.+. ..++...+++|.|+.+ +|+|||++.+...+ .-++.+.+|+|+. .|+..
T Consensus 222 ~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~~~--~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~Gpw~k~ 299 (408)
T 3p2n_A 222 SPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIPY--KGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKS 299 (408)
T ss_dssp CCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEEEE--TTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEEC
T ss_pred CCCCCceEEEecCCcccccccceecCCCeEcceEEEE--CCEEEEEEEcccCccccccCCCccEEEEEEECCCCCCcEEC
Confidence 542 3455556899997544 89999999876421 2367889999987 89985
Q ss_pred c-cccccCCCCCceeeCcEEEec
Q 014058 235 D-HPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 235 ~-~~l~~~~~~~~wECPdlf~l~ 256 (431)
. .|+.... .| |.+|+-+
T Consensus 300 ~~nPVl~~~----~d-p~Vw~~~ 317 (408)
T 3p2n_A 300 PYNPISNSG----HE-ICVWPYN 317 (408)
T ss_dssp TTCCSCSSC----SS-CCEEEET
T ss_pred CCCCcccCC----CC-CeeEecC
Confidence 3 3554321 12 6677654
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=229.60 Aligned_cols=203 Identities=17% Similarity=0.237 Sum_probs=143.6
Q ss_pred cCCCCc------cCCCc-ceEECCEEEEEEEECCCCC--CCCC---cceEEEEEeCC---------CccceecccccCCC
Q 014058 62 PPQNWI------NDPNG-PMYYKGVYHLFYQYNPLGP--LFGD---KMIWAHSVSYD---------LINWIHLSHALCPS 120 (431)
Q Consensus 62 p~~gw~------NDPnG-~i~~~G~YHlFyq~~P~~~--~wg~---~~~WgHa~S~D---------lv~W~~~~~aL~P~ 120 (431)
.+..|+ +||+| ++.++|.||+|||..|... .|+. ..++||+.|+| |+||++.+.+|.++
T Consensus 67 ~~d~wVWDsWPl~D~dg~~v~~~G~~~vF~L~a~r~~~~~~~drH~~a~I~~~yskdg~~~~~~~~l~~W~~~G~vf~~g 146 (493)
T 1w18_A 67 NPDVWVWDTWTLIDKHADQFSYNGWEVIFCLTADPNAGYGFDDRHVHARIGFFYRRAGIPASRRPVNGGWTYGGHLFPDG 146 (493)
T ss_dssp CTTCEEEEEEEEECTTCCBEEETTEEEEEEEEECTTSSCCGGGCGGGCEEEEEEEESSCCGGGSCTTCCCEEEEESSCTT
T ss_pred cCCcceEcCeeEECCCCCEEEECCeEEEEEEecCCccCCCccCCCccceeeeEEecCccccccccccCCceECCccccCC
Confidence 377775 47787 7778999999999998765 3441 23455999999 79999999998665
Q ss_pred Cc--------cCCCCeEeecEEEc--cCCeEEEEEeeccC----CC----ceeEEEEEec-----CCCCCccceeeeecC
Q 014058 121 GP--------YDINSCWSGSVTIL--PGDKPFILYTGIDA----SG----QQVQNLAMPE-----NLSDPLLKDWVKFSG 177 (431)
Q Consensus 121 ~~--------~D~~gv~SGsav~~--~dg~~~l~YTg~~~----~~----~~~q~lA~S~-----D~~d~~l~~w~k~~~ 177 (431)
.. ++..++|||||++. .||+++||||+... ++ ...|+||.+. +..+..+.+|+|.
T Consensus 147 ~~~~~~~~~~~d~~~~WSGSAi~~~~~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~-- 224 (493)
T 1w18_A 147 ASAQVYAGQTYTNQAEWSGSSRLMQIHGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAH-- 224 (493)
T ss_dssp GGGGGSTTSCCSEEEEEEEEEEESSTTSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEE--
T ss_pred CccccccccccCcCCeEcCceEEeccCCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccC--
Confidence 43 45579999999985 79999999999753 11 1246666332 2111235678875
Q ss_pred CcEEcCCCCC-------CCCCccCCeEEEecC-CCeEEEEEeeeeC----------------------------------
Q 014058 178 NPVMTPPNGV-------KDDMFRDPTTAWQAP-DGRWRVLVGGQID---------------------------------- 215 (431)
Q Consensus 178 ~Pvi~~p~~~-------~~~~~RDP~Vv~~~~-~g~~~M~~ga~~~---------------------------------- 215 (431)
.+|+.++..+ ...+||||+|+..++ +|++||+++++..
T Consensus 225 ~~l~~~DG~~Yqt~~q~~~~~fRDP~vf~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~ 304 (493)
T 1w18_A 225 TPLLQPDGVLYQNGAQNEFFNFRDPFTFEDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAY 304 (493)
T ss_dssp EEEECCCSSSBCCTTTCTTCCCEEEEEEECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGG
T ss_pred CceeecCccccccccccCCccccCCEEEecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccch
Confidence 4666543211 246999999654432 4999999998652
Q ss_pred -CcceEEEEEe--CCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 216 -NEGMAFVYWS--WDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 216 -~~G~i~ly~S--~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
..|+|.|+++ +|+.+|++...++.......++|||++|+++ | ||+|+.|..
T Consensus 305 ~~~g~IGLa~~~s~Dl~~We~~~PL~~a~~v~deiErP~V~~~~--G-------------kyYLFtSs~ 358 (493)
T 1w18_A 305 YQKANIGLAIATDSTLSKWKFLSPLISANCVNDQTERPQVYLHN--G-------------KYYIFTISH 358 (493)
T ss_dssp GCCEEEEEEEESSTTSCCEEEEEEEEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEC
T ss_pred hccceEEEEEeCCCCCccceecCccccCCCCCCcEECCeEEEEC--C-------------EEEEEEEcc
Confidence 1467766654 6899999876444444455699999999998 6 888887754
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=220.22 Aligned_cols=193 Identities=17% Similarity=0.278 Sum_probs=147.8
Q ss_pred CCCCcccceeeecCCC-------Cc-cCCCcceEECCEEEEEEEECCCCC-------------CCCCcceEEEEEeCCCc
Q 014058 50 ANQPYLTSYHFRPPQN-------WI-NDPNGPMYYKGVYHLFYQYNPLGP-------------LFGDKMIWAHSVSYDLI 108 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~g-------w~-NDPnG~i~~~G~YHlFyq~~P~~~-------------~wg~~~~WgHa~S~Dlv 108 (431)
....++++||..|..| |+ |||||+++++|+||||||++|... .|+ .++|+||+|+||+
T Consensus 65 ~~~~~f~r~~~~Pi~g~~~~~~g~~~~DP~~v~~~dG~yymfY~~~~~~~~G~~~~~~~~~~~~~~-~~~i~~a~S~Dlv 143 (404)
T 4ak5_A 65 HDNKWFFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWD-RCDIWYATSKDGL 143 (404)
T ss_dssp CCSTTCCEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTT-TCEEEEEEESSSS
T ss_pred CCCchhhhcccccccCCcccccceeecCCcEEEEECCEEEEEEEeCCCcccccccccccccccccC-ccEEEEEECCCCC
Confidence 4577888888777777 87 999999999999999999998411 366 7899999999999
Q ss_pred cceecccccCCC--CccCCCCeEeecEEEccCCeEEEEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCcEEc
Q 014058 109 NWIHLSHALCPS--GPYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT 182 (431)
Q Consensus 109 ~W~~~~~aL~P~--~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~ 182 (431)
||++++.+|.|. ..+|..+||+++++. .+|+++|+||+.... ..+.+++|+|++.. ..|++. ++||+.
T Consensus 144 ~W~~~g~~L~~~~~~~wd~~gv~aP~Vi~-~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~----Gpwt~~-~~Pvl~ 217 (404)
T 4ak5_A 144 TWKEQGIAVKRGEKGAYDDRSVFTPEVME-WKGKYYLCYQAVKSPYTVRVKNTIGMACADSPE----GLWTKT-DKPVLE 217 (404)
T ss_dssp EEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSCCCTTCCCEEEEEEESSTT----CCCEEC-SSCSBC
T ss_pred CceeCceEeecCCCCccccCCEEeeEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEEeCCC----CCceEC-CCceec
Confidence 999999999886 467889999999987 499999999997542 35678999998753 379985 689986
Q ss_pred CCC------------------CCCCCCccCCeEEEecCCCeEEEEEeeeeCC--------cceEEEEEeCCCC-CcEEcc
Q 014058 183 PPN------------------GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--------EGMAFVYWSWDFI-HWTKLD 235 (431)
Q Consensus 183 ~p~------------------~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~--------~G~i~ly~S~Dl~-~W~~~~ 235 (431)
+.+ .++...++||.|+. .+|+|||++.+.... ..++.++.|+|+. .|+...
T Consensus 218 ~~~~~~W~~ddd~~~~~~~~~~wD~~~~~~P~v~~--~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~Gpw~k~~ 295 (404)
T 4ak5_A 218 PSDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCIIP--YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPMGPYVKSE 295 (404)
T ss_dssp CCSCCEECSSSSCTTCEEECCSTTSSEEEEEEEEE--ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEECT
T ss_pred CCCCcceeeccCceeeeccCCcccCCcEECCEEEE--ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCCCCcEECC
Confidence 432 13445678999654 489999999876421 1368899999986 798753
Q ss_pred -cccccCCCCCceeeCcEEEec
Q 014058 236 -HPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 236 -~~l~~~~~~~~wECPdlf~l~ 256 (431)
.|+.... .|+ .+|+-+
T Consensus 296 ~nPv~~~~----~e~-~Vw~~~ 312 (404)
T 4ak5_A 296 YNPISNSG----HEV-CVWPYK 312 (404)
T ss_dssp TCCSCSSC----SSC-CEEEET
T ss_pred CCceecCC----Ccc-eEEEeC
Confidence 3554321 244 566554
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-24 Score=214.36 Aligned_cols=188 Identities=19% Similarity=0.245 Sum_probs=145.3
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceec-ccccCCC--CccCCCCe-EeecEEEccCCe
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL-SHALCPS--GPYDINSC-WSGSVTILPGDK 140 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~-~~aL~P~--~~~D~~gv-~SGsav~~~dg~ 140 (431)
|.+| +|+++++|+||||||.++. ++ .++|+||+|+|++||++. +++|.|+ ..++..|| |+++++.. +|+
T Consensus 55 gv~n--~~~i~~~g~~~lfY~~~~~---~~-~~~~~~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~g~~yDP~v~~~-~d~ 127 (338)
T 1vkd_A 55 RVFN--SAVVPYNGEFVGVFRIDHK---NT-RPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDT 127 (338)
T ss_dssp EEEE--EEEEEETTEEEEEEEEEET---TS-CEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTE
T ss_pred eEEc--cEEEEECCEEEEEEEEECC---CC-cEEEEEEEeCCCCccEECCCCEEeCCCCCccccCCEEeCcEEEEE-CCE
Confidence 4444 4788999999999999874 45 799999999999999998 5788888 66788899 89999874 889
Q ss_pred EEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecC-CCeEEEEEeeee---CC
Q 014058 141 PFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP-DGRWRVLVGGQI---DN 216 (431)
Q Consensus 141 ~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~-~g~~~M~~ga~~---~~ 216 (431)
++|+||+ .. ..+.|++|.|+|. ++|+|.. +++. + ..|||. +|.+. +|+|+|+++.+. ..
T Consensus 128 yym~yt~-~~-~~~~i~la~S~Dl-----~~W~~~~--~i~~-~------~~rd~~-~fp~~i~Gky~m~~~~q~~~~~~ 190 (338)
T 1vkd_A 128 YYITFCT-DD-HGPTIGVGMTKDF-----KTFVRLP--NAYV-P------FNRNGV-LFPRKINGKYVMLNRPSDNGHTP 190 (338)
T ss_dssp EEEEEEE-ES-SSEEEEEEEESSS-----SSEEEEC--CSSS-S------SEEEEE-ECSSCBTTBEEEEEEECCSSSCS
T ss_pred EEEEEEE-cC-CcceEEEEEECCC-----CeEEECC--ccCC-C------cCCceE-EEEEEECCEEEEEEEecCCCCCC
Confidence 9999999 64 5688999999985 7999863 3331 1 468997 56543 899999997753 35
Q ss_pred cceEEEEEeCCCCCcEEcccccccCCCCCcee------eCcEEEeccCCccceecccCCCCeeeEEEEeeCC--CCeeeE
Q 014058 217 EGMAFVYWSWDFIHWTKLDHPLYSVQETGMWE------CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS--DKHDYY 288 (431)
Q Consensus 217 ~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wE------CPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~--~~~~~Y 288 (431)
.|.|.+++|+||.+|+..+. +.....+.||| ||+.|+++ + .|+|+++... .....|
T Consensus 191 ~~~I~~a~S~Dl~~W~~~~~-l~~~~~~~~wE~~~ig~gp~~i~~~--~-------------gwll~y~G~~~~~~~~~Y 254 (338)
T 1vkd_A 191 FGDIFLSESPDMIHWGNHRF-VLGRSSYNWWENLKIGAGPYPIETS--E-------------GWLLIYHGVTLTCNGYVY 254 (338)
T ss_dssp CCCEEEEEESSSSCBEEEEE-EECCCSSCGGGSSEEEECSCCEEET--T-------------EEEEEEEEEEEETTEEEE
T ss_pred CcEEEEEEcCCcccCCcCce-EEcCCCCCCcccCccccCCCcEEeC--C-------------cEEEEEecccCCCCCcEE
Confidence 67899999999999997654 43333344899 79999997 3 5777766421 124568
Q ss_pred EEee
Q 014058 289 VLGT 292 (431)
Q Consensus 289 ~vG~ 292 (431)
.+|-
T Consensus 255 ~~G~ 258 (338)
T 1vkd_A 255 SFGA 258 (338)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8886
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.90 E-value=6e-23 Score=202.93 Aligned_cols=188 Identities=15% Similarity=0.207 Sum_probs=143.5
Q ss_pred CCccCCCcceEEC--CEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC--ccCCCCeEeecEEEcc---
Q 014058 65 NWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--PYDINSCWSGSVTILP--- 137 (431)
Q Consensus 65 gw~NDPnG~i~~~--G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~--~~D~~gv~SGsav~~~--- 137 (431)
|+++||+ +++.+ |+||||+++.+. +.|+ ..+|.|++|+||+||+.++.+|.+.. .++..++|+++++..+
T Consensus 13 g~~~DP~-i~~~~~dg~yyl~~t~~~~-~~~~-~~~~~~~~S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~v~~~~~~~ 89 (311)
T 3qz4_A 13 GFHADPE-VLYSHQTKRYYIYPTSDGF-PGWG-GSYFKVFSSKNLKTWKEETVILEMGKNVSWANGNAWAPCIEEKKIDG 89 (311)
T ss_dssp SSEEEEE-EEEETTTTEEEEEEEECSS-GGGC-CCEECCEEESSSSSCEECCCCEEBTTTBTTEEEEEEEEEEEEEEETT
T ss_pred CCcCCce-EEEECCCCEEEEEEecCCC-CCCC-CcEEEEEECCCCCCcEECceecccccCCCcccCCcCCCeeEEeeecC
Confidence 7889999 88987 999999998765 4577 78899999999999999999997764 4556799999998743
Q ss_pred CCeEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecC-CCeEEEEEeeeeC
Q 014058 138 GDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP-DGRWRVLVGGQID 215 (431)
Q Consensus 138 dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~-~g~~~M~~ga~~~ 215 (431)
+|+++|+||+.... ..+.+++|+|+|.. ..|++. ++||+...+. ...+++||+|+ .++ +|++||++++
T Consensus 90 ~Gkyylyyt~~~~~~~~~~i~va~s~~p~----Gpw~~~-~~p~~~~~~~-g~~~~iDp~vf-~dd~dG~~yl~~g~--- 159 (311)
T 3qz4_A 90 KYKYFFYYSANPTTNKGKQIGVAVADSPT----GPFTDL-GKPIITSSPT-GRGQQIDVDVF-TDPVSGKSYLYWGN--- 159 (311)
T ss_dssp EEEEEEEEEEEETTCSSCEEEEEEESSTT----CCCEEC-SSCSBCSCTT-SSSBSCCCEEE-ECTTTCCEEEEECB---
T ss_pred CCEEEEEEEeccCCCCCeeEEEEEECCCC----CCceEC-CcceEcCCCC-CCcccccccEE-EECCCCcEEEEEcC---
Confidence 89999999987542 35788999998863 479884 5788854321 13578999965 545 8999999986
Q ss_pred CcceEEEEE-eCCCCCcEEcccccccCC-----CCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC
Q 014058 216 NEGMAFVYW-SWDFIHWTKLDHPLYSVQ-----ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (431)
Q Consensus 216 ~~G~i~ly~-S~Dl~~W~~~~~~l~~~~-----~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 282 (431)
|.+.+.+ |+|+.+|......+..+. ...+.|||.+|+.+ | +++|++|...
T Consensus 160 --~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~ 215 (311)
T 3qz4_A 160 --GYMAGAELNDDMLSIKEETTVVLTPKGGTLQTYAYREAPYVIYRK--G-------------IYYFFWSVDD 215 (311)
T ss_dssp --SSCEEEEBCTTSSSBCGGGCEECCCCCCCTTTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred --CCEEEEEeCCcccccCCCceEEeCCCCCcccccceeeccEEEEEC--C-------------EEEEEEEcCC
Confidence 3355666 889888864322232221 12479999999997 6 8889888754
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-22 Score=198.93 Aligned_cols=147 Identities=18% Similarity=0.259 Sum_probs=113.9
Q ss_pred ceEECCEEEEEEEECCCCCC---CCCcceEEEEEeCCCccceec-ccccCCCCccCC-----CCeEeecEEEccCCeEEE
Q 014058 73 PMYYKGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLINWIHL-SHALCPSGPYDI-----NSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 73 ~i~~~G~YHlFyq~~P~~~~---wg~~~~WgHa~S~Dlv~W~~~-~~aL~P~~~~D~-----~gv~SGsav~~~dg~~~l 143 (431)
+++++|+||||||.++.... ++ .++||||+|+|++||++. .++|.|+..++. .||++++++..+||+++|
T Consensus 58 ai~~dGky~LfY~~~~~~~~~~~~~-~~~ig~A~S~DGi~w~~~~~Pvl~P~~~~~~~~e~~~gv~DP~v~~~edG~yym 136 (364)
T 3qc2_A 58 ATLYNGEIVVLYRAEDKSGVGIGHR-TSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGGCEDPRIAVTDDGLYVM 136 (364)
T ss_dssp EEEETTEEEEEEEEECSSSSSTTCS-CEEEEEEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSCEEE
T ss_pred EEEECCEEEEEEEEECCCCcccCCC-ceEEEEEEeCCCceeeEcCcCeEcCCCccccccccCCcEECCEEEEeCCCEEEE
Confidence 77899999999999987643 25 799999999999999996 478999876653 799999998755899999
Q ss_pred EEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCC--CCCCCCccCCeEE--------E-ecCCCeEEEEEee
Q 014058 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN--GVKDDMFRDPTTA--------W-QAPDGRWRVLVGG 212 (431)
Q Consensus 144 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~--~~~~~~~RDP~Vv--------~-~~~~g~~~M~~ga 212 (431)
+||+... ..+.|++|+|+|+ ++|+|.. +++.+.. .+.....+|+.++ | ...+|+|+|+++.
T Consensus 137 ~Yta~~~-~~~~i~lA~S~Dl-----~~W~k~g--~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~ki~GkY~M~~g~ 208 (364)
T 3qc2_A 137 MYTQWNR-HVPRLAVATSRNL-----KDWTKHG--PAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFMYWGE 208 (364)
T ss_dssp EEEEECS-SCEEEEEEEESSS-----SSCEEEE--ETTSSHHHHTTTTCCCCCEEEEEEEETTEEEECEETTEEEEEECS
T ss_pred EEEecCC-CCeEEEEEEECCC-----CEEEEee--eccCccccccccccccccceeeeeccccceeeEEECCEEEEEEcC
Confidence 9999753 5688999999986 8999973 5543210 1112234666532 1 2258999999862
Q ss_pred eeCCcceEEEEEeCCCCCcEE
Q 014058 213 QIDNEGMAFVYWSWDFIHWTK 233 (431)
Q Consensus 213 ~~~~~G~i~ly~S~Dl~~W~~ 233 (431)
+.|.+++|+||++|+.
T Consensus 209 -----~~I~la~S~Dl~~W~~ 224 (364)
T 3qc2_A 209 -----EHVFAATSDDLIHWTP 224 (364)
T ss_dssp -----SSBEEEEESSSSSEEE
T ss_pred -----CeEEEEeCCCcccceE
Confidence 5688999999999987
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-21 Score=189.30 Aligned_cols=198 Identities=15% Similarity=0.129 Sum_probs=144.2
Q ss_pred CCccCCCcceEECCEEEEEEEECCCC---CCCCCcceEEEEEeCCCccceecccccCCC-CccCCCCeEeecEEEccCCe
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLG---PLFGDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDK 140 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~---~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~-~~~D~~gv~SGsav~~~dg~ 140 (431)
.+.+||+. +.++|+||||+++.+.. +.+. ...|.+++|+||+||+.++.+|.+. ..++..++|+++++. .+|+
T Consensus 10 ~~~~DP~i-~~~~g~yYl~~t~~~~~~~~~~~~-~~~~~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~WAP~i~~-~~Gk 86 (307)
T 3qee_A 10 VFTADPAA-LVHKGRVYLYAGRDEAPDNTTFFV-MNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWASQVIE-RNGK 86 (307)
T ss_dssp SEEEEEEE-EEETTEEEEEEEEECCSSSSSCCC-EEEEEEEEESSSSSCEEEEEEEEGGGSTTEEEEEEEEEEEE-ETTE
T ss_pred CccCCCce-EEECCEEEEEEccCcccCCccccc-cCcEEEEECCCCCCceECccccccCCCCcccCCccCceEEE-ECCE
Confidence 35699995 56899999999988753 3455 6789999999999999999998864 455667899999987 5999
Q ss_pred EEEEEeeccCC--CceeEEEEEecCCCCCccceeeeecCCcEEcCC-C--CCCCCCccCCeEEEecCCCeEEEEEeeeeC
Q 014058 141 PFILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-N--GVKDDMFRDPTTAWQAPDGRWRVLVGGQID 215 (431)
Q Consensus 141 ~~l~YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p-~--~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~ 215 (431)
++|+||+...+ ..+.+++|+|++.. ..|++..++|++... . .....+++||+| |.+++|++||++|+.
T Consensus 87 yylyyt~~~~~~~~~~~i~va~s~~p~----Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~v-f~DddG~~Yl~~g~~-- 159 (307)
T 3qee_A 87 FYWYVTVRHDDTKPGFAIGVAVGDSPI----GPFKDALGKALITNDMTTDTPIDWDDIDPSV-FIDDDGQAYLFWGNT-- 159 (307)
T ss_dssp EEEEEEEEECTTSCSEEEEEEEESSTT----CCCEESSSSCSBCGGGCCSSCCSCCSCCCEE-EECTTSCEEEEECSS--
T ss_pred EEEEEEeccCCCCCceEEEEEEECCCC----CCCEeCCCCeeEecCccccCCCCcCcccCce-EECCCCCEEEEEeCC--
Confidence 99999987542 24788999998764 479985457887421 1 111235899996 454689999999874
Q ss_pred CcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeeeEEEe
Q 014058 216 NEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (431)
Q Consensus 216 ~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (431)
+..+.--|+|+.+|......+. ....++|||.+|+.+ | +++|++|........|...
T Consensus 160 --~i~~~~l~~d~~~~~g~~~~i~--~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~~~~~~~~s 216 (307)
T 3qee_A 160 --RPRYAKLKKNMVELDGPIRAIE--GLPEFTEAIWVHKYQ--D-------------NYYLSYAMGFPEKIGYAMG 216 (307)
T ss_dssp --SCEEEEECTTSSSEEEEEEECC--CCTTEEEEEEEEECC----------------CEEEEEEETTTTEEEEEEE
T ss_pred --cEEEEEECCccccccCceEEeC--CCCCccCceEEEEEC--C-------------EEEEEEECCCCcEEEEEEC
Confidence 2222334889999865332222 235689999999987 5 7888888754445555554
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-19 Score=176.43 Aligned_cols=183 Identities=14% Similarity=0.080 Sum_probs=132.1
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccC-------CCCeEeecEEEccC
Q 014058 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD-------INSCWSGSVTILPG 138 (431)
Q Consensus 66 w~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D-------~~gv~SGsav~~~d 138 (431)
.++||+ +++++|+||||++..+. ...|.+++|+||+||+.++.+|.+...++ ..++|+++++. .+
T Consensus 11 ~~~DP~-i~~~~g~yYl~~t~~~~------~~~i~i~~S~DLv~W~~~g~~l~~~~~w~~~~~~~~~~~~wAP~v~~-~~ 82 (293)
T 1uv4_A 11 LLHDPT-MIKEGSSWYALGTGLTE------ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YN 82 (293)
T ss_dssp ECSSCE-EEEETTEEEEEEECCTT------SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ET
T ss_pred cCCCCe-EEEECCEEEEEEcCCCC------CCceEEEECCCCCCccCCCccCCCCCcccccccccCCCceecceEEE-EC
Confidence 468999 56689999999998652 35799999999999999999998774443 36899999987 59
Q ss_pred CeEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCc
Q 014058 139 DKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (431)
Q Consensus 139 g~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~ 217 (431)
|+++|+||+.... ..+.+++|+|+|... ..|++. .+++..++. ...+++||.|+ .+++|++||++++..
T Consensus 83 G~yylyyt~~~~~~~~~~i~va~s~~p~~---Gpw~~~--~~~l~~~~~-~~~~~iDp~vf-~d~dG~~Yl~~g~~~--- 152 (293)
T 1uv4_A 83 GKYWLYYSVSSFGSNTSAIGLASSTSISS---GGWKDE--GLVIRSTSS-NNYNAIDPELT-FDKDGNPWLAFGSFW--- 152 (293)
T ss_dssp TEEEEEEEECCTTCSCEEEEEEEESCTTT---TCCEEE--EEEEEECTT-SSSCCCSCEEE-ECTTSCEEEEECBST---
T ss_pred CEEEEEEEecCCCCCcceEEEEECCCCCC---CCCccC--CccEecCCC-CCCCCCCCCeE-ECCCCCEEEEEEecC---
Confidence 9999999986542 456789999988520 279875 344532221 23478999965 446899999998642
Q ss_pred ceEEEEE-eCCCCCcEEcccccc-cCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 218 GMAFVYW-SWDFIHWTKLDHPLY-SVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 218 G~i~ly~-S~Dl~~W~~~~~~l~-~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
+.+.+++ ++|+..+.-....+. ......++|||.+|+.+ | +++|++|..
T Consensus 153 ~~i~~~~l~~d~~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~yyL~~s~~ 203 (293)
T 1uv4_A 153 SGIKLTKLDKSTMKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFD 203 (293)
T ss_dssp TCEEEEEECTTTCSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEE
T ss_pred CCEEEEEECchhCccCCcceEEeecCCCCCccCccEEEEEC--C-------------EEEEEEEeC
Confidence 3356666 678766542211122 22345689999999997 6 888888864
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-19 Score=179.19 Aligned_cols=182 Identities=14% Similarity=0.110 Sum_probs=130.6
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccC-------CCCeEeecEEEccC
Q 014058 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD-------INSCWSGSVTILPG 138 (431)
Q Consensus 66 w~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D-------~~gv~SGsav~~~d 138 (431)
+++||+ +++++|+||||++. ..|.|++|+||+||+.++.+|.+...++ ..++|+++++. .+
T Consensus 6 ~~~DP~-i~~~~g~yyl~~t~----------~~i~~~~S~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~v~~-~~ 73 (318)
T 1gyh_A 6 DVHDPV-MTREGDTWYLFSTG----------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HK 73 (318)
T ss_dssp CCSSCE-EEEETTEEEEEESE----------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ET
T ss_pred ecCCCE-EEEECCEEEEEECC----------CCcEEEECCCCCCccCCCcccCCCcccccccCCCcCcccccCeEEE-EC
Confidence 578999 47889999999986 2489999999999999999998875554 47899999987 59
Q ss_pred CeEEEEEeeccCC-CceeEEEEEecCCCCCcc--ceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC
Q 014058 139 DKPFILYTGIDAS-GQQVQNLAMPENLSDPLL--KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID 215 (431)
Q Consensus 139 g~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l--~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~ 215 (431)
|+++|+||+.... ..+.+++|+|++. ||.. ..|++. ++|+...+.....+++||+|+ .+++|++||++++..
T Consensus 74 g~~ylyyt~~~~~~~~~~igva~s~~~-dp~gp~~~w~~~--~~v~~~~~~~~~~~~iDp~vf-~D~dG~~Yl~~g~~~- 148 (318)
T 1gyh_A 74 GLFYLYYSVSAFGKNTSAIGVTVNKTL-NPASPDYRWEDK--GIVIESVPQRDLWNAIAPAII-ADDHGQVWMSFGSFW- 148 (318)
T ss_dssp TEEEEEEEECCTTSCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEE-ECTTSCEEEEECBST-
T ss_pred CEEEEEEEeccCCCCcceEEEEEeCCC-CCCCCCcceecC--CcccccCCCCCCCCcccCCeE-ECCCCCEEEEeeccC-
Confidence 9999999987542 4577889999762 2211 129875 467643222234578999964 446899999998742
Q ss_pred CcceEEEEE-eCC------CCCcEEccc-----cccc-CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 216 NEGMAFVYW-SWD------FIHWTKLDH-----PLYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 216 ~~G~i~ly~-S~D------l~~W~~~~~-----~l~~-~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
+.|.+++ ++| +..|+.... .+.. .....++|||.+|+.+ | +++|++|..
T Consensus 149 --~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yYL~~s~~ 210 (318)
T 1gyh_A 149 --GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp --TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred --CCEEEEEeCCccccccceeecceecccCcceeecccCCCCcceeccEEEEEC--C-------------EEEEEEEeC
Confidence 3456677 456 346764310 1211 1235689999999997 6 888888863
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-20 Score=193.59 Aligned_cols=199 Identities=17% Similarity=0.116 Sum_probs=133.6
Q ss_pred ccCCCc-ceEECCEEEEEEEECCCCCCCCC---cceEEEEEe---------CCCccceecccccCCCC--------ccCC
Q 014058 67 INDPNG-PMYYKGVYHLFYQYNPLGPLFGD---KMIWAHSVS---------YDLINWIHLSHALCPSG--------PYDI 125 (431)
Q Consensus 67 ~NDPnG-~i~~~G~YHlFyq~~P~~~~wg~---~~~WgHa~S---------~Dlv~W~~~~~aL~P~~--------~~D~ 125 (431)
+.|+.| ++-++|..++|++..|....|+. ...+||..| .|+.+|++.+.++.++. .++.
T Consensus 80 lqd~~g~~~~~~Gy~lvf~L~a~~~~~~~drH~~a~iglfy~k~G~~~~~s~d~~~W~~~G~vf~~~~~~~~~~~~~~~~ 159 (496)
T 3vss_A 80 LTDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSH 159 (496)
T ss_dssp EECTTCCBEEETTEEEEEEEEEETTSCGGGGGGGCEEEEEEEESSCCTTTSCTTCCCEEEEESSCTTSGGGGCSCTTCSE
T ss_pred eECCCCCEEEECCEEEEEEEEcCCCCCCCcCcceeEEeeeeccCCcccccCcccCCcEECccccCCCCCcccccCCCccC
Confidence 357766 66679999999997665443331 466789655 46679999998876542 1222
Q ss_pred CCeEeecEEEccCCeEEEEEeeccC--------CCceeEEEEEecCC--CCCccceeeeecCCcEEcCCCC--------C
Q 014058 126 NSCWSGSVTILPGDKPFILYTGIDA--------SGQQVQNLAMPENL--SDPLLKDWVKFSGNPVMTPPNG--------V 187 (431)
Q Consensus 126 ~gv~SGsav~~~dg~~~l~YTg~~~--------~~~~~q~lA~S~D~--~d~~l~~w~k~~~~Pvi~~p~~--------~ 187 (431)
..-|||||++.+||+++||||++.. ...+.|+||+++.. .+.....|++.+.+++|-.+++ .
T Consensus 160 ~~eWSGSAi~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~ 239 (496)
T 3vss_A 160 QTQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQN 239 (496)
T ss_dssp EEEEEEEEEECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTC
T ss_pred CceEecceEECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccc
Confidence 3469999998889999999998632 12345666654310 0011267777766676633322 2
Q ss_pred CCCCccCCeEEEec-CCCeEEEEEeeeeC-----------------------------------CcceEEEE--EeCCCC
Q 014058 188 KDDMFRDPTTAWQA-PDGRWRVLVGGQID-----------------------------------NEGMAFVY--WSWDFI 229 (431)
Q Consensus 188 ~~~~~RDP~Vv~~~-~~g~~~M~~ga~~~-----------------------------------~~G~i~ly--~S~Dl~ 229 (431)
...+||||+|+... .+|++||++.+... ..|+|.|+ +|+|+.
T Consensus 240 ~~~~fRDP~vf~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~D~~ 319 (496)
T 3vss_A 240 EFFNFRDPFTFEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLT 319 (496)
T ss_dssp TTCCCEEEEEECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESSTTSC
T ss_pred cccccCCCeeEecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCCCCC
Confidence 34679999964432 47889999866431 13666555 589999
Q ss_pred CcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEee
Q 014058 230 HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (431)
Q Consensus 230 ~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 280 (431)
.|++.++++.+.....|||||++|+++ | ||+|+.+.
T Consensus 320 ~We~~~PL~~a~~v~deiErP~vf~~d--G-------------KyYLFt~s 355 (496)
T 3vss_A 320 EWEFLPPILSANCVTDQTERPQIYFKD--G-------------KSYLFTIS 355 (496)
T ss_dssp CEEEEEEEEEEETTBSCCEEEEEEEET--T-------------EEEEEEEE
T ss_pred ccEEeCccccCCCCCCceeCCcEEEEC--C-------------EEEEEEec
Confidence 999987544444456799999999998 6 88888765
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.8e-20 Score=184.15 Aligned_cols=145 Identities=17% Similarity=0.262 Sum_probs=110.4
Q ss_pred ceEECCEEEEEEEECCCCCC--CCCcceEEEEEeCCCccceec-ccccCCCCccC-----CCCeEeecEEEccCCeEEEE
Q 014058 73 PMYYKGVYHLFYQYNPLGPL--FGDKMIWAHSVSYDLINWIHL-SHALCPSGPYD-----INSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 73 ~i~~~G~YHlFyq~~P~~~~--wg~~~~WgHa~S~Dlv~W~~~-~~aL~P~~~~D-----~~gv~SGsav~~~dg~~~l~ 144 (431)
+++++|+|||||+.++.... |...++|+||+|+|++||++. .++|.|+...+ ..+|++++++..+||+++|+
T Consensus 55 ai~~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~~~~~~~DP~v~~~~dg~y~m~ 134 (356)
T 3taw_A 55 ATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENECPGGTEDPRIAMTEDGTYVLL 134 (356)
T ss_dssp EEEETTEEEEEEEEECSSSCSTTSSCEEECCEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSCEEEE
T ss_pred EEEECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCCccceECCcceecCCCccccccccCCceECCEEEEECCCEEEEE
Confidence 77899999999999987542 222789999999999999995 57888886543 47999999987658999999
Q ss_pred EeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCcc-----CCeE----------EEecCCCeEEEE
Q 014058 145 YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFR-----DPTT----------AWQAPDGRWRVL 209 (431)
Q Consensus 145 YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~R-----DP~V----------v~~~~~g~~~M~ 209 (431)
||+.. .....+++|.|+|+ ++|++.. +++.++. ..+|| |..+ +++ .+|+|+|+
T Consensus 135 yt~~~-~~~~~i~la~S~Dl-----~~W~~~g--~i~~~~~---~~~~~~~~~k~~~l~p~~~~g~p~v~k-~~G~y~m~ 202 (356)
T 3taw_A 135 YTQWN-RKVPRLAVATSKDL-----KHWTKFG--PAFEKAY---NGKFKDEATKSASLVTTLKGDKQVIAK-VNGKYFMY 202 (356)
T ss_dssp EEEEC-SSCEEEEEEEESSS-----SSCEEEE--ETTSSHH---HHTTTTSCCCCEEEEEEEETTEEEECC-BTTBEEEE
T ss_pred EEEeC-CCCceEEEEECCCC-----CCceEee--eEcCCcc---ccccccccCCccEEeecccCCCceEEE-ECCEEEEE
Confidence 99875 35678999999986 7999863 5553321 11233 2221 233 68999999
Q ss_pred EeeeeCCcceEEEEEeCCCCCcEEc
Q 014058 210 VGGQIDNEGMAFVYWSWDFIHWTKL 234 (431)
Q Consensus 210 ~ga~~~~~G~i~ly~S~Dl~~W~~~ 234 (431)
++. +.|.+++|+||++|+..
T Consensus 203 ~g~-----~~I~la~S~Dl~~W~~~ 222 (356)
T 3taw_A 203 WGE-----KNVYAATSDNLIDWDPL 222 (356)
T ss_dssp ECS-----SSBEEEEESSSSSCEEC
T ss_pred eCC-----ceeeEEECCCcccCeec
Confidence 972 46889999999999974
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.9e-20 Score=179.55 Aligned_cols=180 Identities=18% Similarity=0.164 Sum_probs=134.1
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEE-ccCCeEE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTI-LPGDKPF 142 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~-~~dg~~~ 142 (431)
.=...||+ +++++|+||||++..+. + ..+|.+++|+||+||+..+.+|.+...++..++|+++++. ..+|+++
T Consensus 21 ~~~~~DP~-i~~~~g~yyl~~t~~~~---~--~~~i~~~~S~DLv~W~~~g~~l~~~~~~~~~~~wAP~v~~~~~~g~~y 94 (306)
T 3kst_A 21 YLPIADPY-VMFYNNKYYAYGTGGTT---A--GEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFY 94 (306)
T ss_dssp SBCCEEEE-EEEETTEEEEEEESCCS---S--SSEEEEEEESSSSEEEEEEEEEEGGGSSCSSCCEEEEEEEETTTTEEE
T ss_pred cccCCCCE-EEEECCEEEEEEecCCc---C--CCCEEEEEeCCccccEECceecCCCCcccccccccCeEEEECCCCEEE
Confidence 33467999 56779999999997653 2 3579999999999999999999887777778999999864 3499999
Q ss_pred EEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 143 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
|+||+. +.+++|+|++.. ..|++....|++. ...+||.| |.+++|++||+++...++.+ +.+
T Consensus 95 l~yt~~-----~~i~va~s~~p~----Gpw~~~~~~p~~~-------~~~iDp~v-f~D~dG~~Yl~~~~~~~g~~-i~~ 156 (306)
T 3kst_A 95 LFYSAE-----EHICVATSTTPE----GPFRQEVKQPIWS-------EKSIDTSL-FIDDDGTPYLYFVRFTDGNV-IWV 156 (306)
T ss_dssp EEEEET-----TEEEEEEESSTT----CCCBCSSCCCSSS-------SCCEEEEE-EECTTSCEEEEEEEESSSEE-EEE
T ss_pred EEEECC-----CcEEEEEcCCCC----CCcEeCCCccccC-------CCcccceE-EEeCCCCEEEEEEEeCCCCE-EEE
Confidence 999985 368899998864 3688754456543 46799996 45568999999986433323 444
Q ss_pred EE-eCCCCCcEEcccc-cccC------CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC
Q 014058 223 YW-SWDFIHWTKLDHP-LYSV------QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (431)
Q Consensus 223 y~-S~Dl~~W~~~~~~-l~~~------~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 282 (431)
.+ |+|+.+|...... +... ....++|||.+|+.+ | +++|++|...
T Consensus 157 ~~ls~d~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i~k~~--G-------------~YYL~~S~~~ 209 (306)
T 3kst_A 157 AQMTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKN--G-------------VYYLIYSANH 209 (306)
T ss_dssp EEBCTTSSCBCGGGCEEEECCCSGGGCSSSSBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred EEeCcccccccCcceeeeccCCccceecCCCceecceEEEEC--C-------------EEEEEEEeCC
Confidence 44 8999998743211 1111 125689999999987 6 8889888753
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-18 Score=169.57 Aligned_cols=181 Identities=17% Similarity=0.169 Sum_probs=127.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccC--------CCCeEeecEEEc
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD--------INSCWSGSVTIL 136 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D--------~~gv~SGsav~~ 136 (431)
.+++||+ +++++|+||||++. ..|.+++|+||+||+..+.+|.+...++ ..++|+++++.
T Consensus 22 ~~~~DP~-i~~~~g~yYl~~t~----------~~i~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~v~~- 89 (314)
T 3cu9_A 22 LWAHDPV-IAKEGSRWYVFHTG----------SGIQIKTSEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPDICF- 89 (314)
T ss_dssp CBCSSCE-EEEETTEEEEEESE----------ETSEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-
T ss_pred cCcCCCE-EEEECCEEEEEECC----------CCeeEEECcCCCCccCCCcccCCcchhhhccCCCcccCceecCcEEE-
Confidence 4589999 58889999999875 2489999999999999999998775543 46899999987
Q ss_pred cCCeEEEEEeeccCC-CceeEEEEEecCCCCCcc--ceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 137 PGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLL--KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 137 ~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l--~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
.+|+++|+||+.... ..+.+++|+|++. +|.. .+|++. .+++..+.. ...+.+||.|+ .+++|++||++++.
T Consensus 90 ~~g~yylyyt~~~~~~~~~~igva~s~~~-dP~gp~~~w~~~--~~~~~~~~~-~~~~~iDp~vf-~D~dG~~Yl~~g~~ 164 (314)
T 3cu9_A 90 YNGIYYLYYSVSTFGKNTSVIGLATNQTL-DPRDPDYEWKDM--GPVIHSTAS-DNYNAIDPNVV-FDQEGQPWLSFGSF 164 (314)
T ss_dssp ETTEEEEEEEECCTTCCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTT-SSSCCCSCEEE-ECTTSCEEEEECBS
T ss_pred ECCEEEEEEEeccCCCCCceEEEEEeCCC-CCCCCCcCcccC--CeEecCCCC-CCCCccCCCeE-EcCCCCEEEEEecc
Confidence 499999999986532 4577899999762 2221 139885 366643321 23468999964 44689999999874
Q ss_pred eCCcceEEEEE-eCCCCC----cEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 214 IDNEGMAFVYW-SWDFIH----WTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 214 ~~~~G~i~ly~-S~Dl~~----W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
. +.|.+.+ ++|... |+.. .+........++|||.+|+.+ | +++|++|..
T Consensus 165 ~---~~i~~~~l~~d~~~~~~~~~~~-~~~~~~~~~~~~EgP~i~k~~--G-------------~yyL~~s~~ 218 (314)
T 3cu9_A 165 W---SGIQLIQLDTETMKPAAQAELL-TIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (314)
T ss_dssp T---TCEEEEECCTTTCSCCTTCCCE-EEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred C---CcEEEEEECcccCcccCCCceE-EecccCCCCCccCccEEEEEC--C-------------EEEEEEEcC
Confidence 2 2356666 345332 3211 111112235689999999997 6 888888863
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=4e-16 Score=164.70 Aligned_cols=177 Identities=16% Similarity=0.180 Sum_probs=127.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccC------CCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD------INSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D------~~gv~SGsav~~~d 138 (431)
|+.+||+ +++++|+||||++..+ | ...|.+++|+||+||+.++.+|.+...++ ..++|+++++. .+
T Consensus 12 g~~~DP~-i~~~~~~yY~~~s~~~----~--~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~wAP~i~~-~~ 83 (528)
T 1yrz_A 12 GFHPDPS-IVRVGDDYYIATSTFE----W--FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HD 83 (528)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E--ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCe-EEEECCEEEEEEccCc----c--CCCeEEEECCCccCceECccccCCcccccccCCCCCCCEECCeEEE-EC
Confidence 6899999 7899999999987543 1 24589999999999999999987664332 46899999987 69
Q ss_pred CeEEEEEeeccC--C--CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEE---Ee
Q 014058 139 DKPFILYTGIDA--S--GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVL---VG 211 (431)
Q Consensus 139 g~~~l~YTg~~~--~--~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~---~g 211 (431)
|+++|+||+... . +.+.+++|+|+|.. ..|++ |+.. ....+||.|++ +++|++||+ ++
T Consensus 84 g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~------~~~~iDp~vf~-D~dG~~Yl~~~~~~ 148 (528)
T 1yrz_A 84 GTFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL------NSSGFDPSLFH-DDDGRKWLVNMIWD 148 (528)
T ss_dssp TEEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC------CCSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEecccCCCCCcccceEEEEEeCCCC----CCccc----cEEC------CCCcCCCceEE-CCCCCEEEEEeecc
Confidence 999999997542 1 23558899998863 35874 4432 13579999654 468999999 55
Q ss_pred eeeC--CcceEEEEE-eCCCCCcEEccc--ccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 212 GQID--NEGMAFVYW-SWDFIHWTKLDH--PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 212 a~~~--~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
++.. ..+.|.+++ ++|. ++..++ .+..+....++|||.+|+.+ | +|+|++|..
T Consensus 149 ~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~~ 206 (528)
T 1yrz_A 149 YRKGNHPFAGIILQEYSEAE--QKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEG 206 (528)
T ss_dssp CCTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred CCCCCCCCCeEEEEEECCcc--CCCCCCCEEEEcCCCCCccCCCEEEEEC--C-------------EEEEEEeCC
Confidence 5432 135677777 5665 344333 23333345689999999997 6 778887764
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.8e-16 Score=159.05 Aligned_cols=153 Identities=19% Similarity=0.227 Sum_probs=112.6
Q ss_pred ccCCCcceEECCEEEEEEEECC--CCCC-CCCcceEEEEEeCCCccceeccc-ccCCC------------------CccC
Q 014058 67 INDPNGPMYYKGVYHLFYQYNP--LGPL-FGDKMIWAHSVSYDLINWIHLSH-ALCPS------------------GPYD 124 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P--~~~~-wg~~~~WgHa~S~Dlv~W~~~~~-aL~P~------------------~~~D 124 (431)
+.+|. +++++|+|||||+.+. .+.. .. .+.+++|+|+|+. |++++. .+.|. ..+|
T Consensus 170 v~aPs-Vi~~dGkYyL~Yt~~~~~~~~~~~~-~i~va~A~S~DG~-W~~~~~pli~~~~~~~~~~e~d~~~~~~~~~~wd 246 (408)
T 3p2n_A 170 VFTVE-IMKWEDKYYLCYQTVKSPYNVRVKN-QVGLAWADSPDGP-WTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFD 246 (408)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCCTTCCC-EEEEEEESSTTCC-CEECSSCSBCCCSCCEECSSSCCTTCEEECCSTT
T ss_pred eEeeE-EEEECCEEEEEEEeecCCCCCcCCC-ceEEEEEECCCCC-EEECCcceeCCCCCceEEEecCCcccccccceec
Confidence 45777 7889999999999852 2222 23 6789999999998 999864 44443 3566
Q ss_pred CCCeEeecEEEccCCeEEEEEeeccCC-------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeE
Q 014058 125 INSCWSGSVTILPGDKPFILYTGIDAS-------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTT 197 (431)
Q Consensus 125 ~~gv~SGsav~~~dg~~~l~YTg~~~~-------~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~V 197 (431)
..+++.++++. .+|+++|+|++...+ ..+.+++|+|+|.. ..|+|.++|||+... .||+
T Consensus 247 ~~~v~~P~v~~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPVl~~~--------~dp~- 312 (408)
T 3p2n_A 247 SHKVHDPCIIP-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK----GPYVKSPYNPISNSG--------HEIC- 312 (408)
T ss_dssp SSEEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSSC--------SSCC-
T ss_pred CCCeEcceEEE-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCC----CCcEECCCCCcccCC--------CCCe-
Confidence 67788888776 699999999997531 24789999999863 479998888998522 3799
Q ss_pred EEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccc
Q 014058 198 AWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLY 239 (431)
Q Consensus 198 v~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~ 239 (431)
+|.+++|.|+|+ +. ++.|.+.+|+|+|+++|++.+.+..
T Consensus 313 Vw~~~dG~y~mi-~~--~g~gh~~i~~S~Dg~~W~~~~~i~~ 351 (408)
T 3p2n_A 313 VWPYNGGIASLI-TT--DGPEKNTIQWAPDGINFEIKSVIPG 351 (408)
T ss_dssp EEEETTEEEEEE-CS--SSTTCSEEEEESSSSCCEEEEECSC
T ss_pred eEecCCCEEEEE-EE--CCCCcEEEEECCCCCEEEEEeeccc
Confidence 577667767776 32 2344455789999999999886543
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5.2e-16 Score=156.22 Aligned_cols=121 Identities=19% Similarity=0.240 Sum_probs=96.8
Q ss_pred ceecc---cccCCCC------------ccCCCCeEeecEEEccCCeEEEEEeeccCC------CceeEEEEEecCCCCCc
Q 014058 110 WIHLS---HALCPSG------------PYDINSCWSGSVTILPGDKPFILYTGIDAS------GQQVQNLAMPENLSDPL 168 (431)
Q Consensus 110 W~~~~---~aL~P~~------------~~D~~gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~lA~S~D~~d~~ 168 (431)
|++.+ ++|.|.. .+|.+|||+|+|+. .||+++||||++... +.+.|++|+|+|+
T Consensus 17 f~R~~~~nPIl~p~~~~~~~~~~~~~~~~D~~gv~sgsai~-~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dg---- 91 (356)
T 3taw_A 17 FERPTGVNPVIKPLPTKFYCPMREDSVAWEESDTFNPAATI-YDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDG---- 91 (356)
T ss_dssp CBCCTTTCCSBCCCCCEEEETTTTEEEETTSSEEEEEEEEE-ETTEEEEEEEEECSSSCSTTSSCEEECCEEESSS----
T ss_pred eeeCCCCCCeEccCCccccCcccccCCccccCCeECcEEEE-ECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCC----
Confidence 66653 5888876 68999999999987 599999999998642 4678999999986
Q ss_pred cceeeeecCCcEEcCCCCCC-----CCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEccccc
Q 014058 169 LKDWVKFSGNPVMTPPNGVK-----DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (431)
Q Consensus 169 l~~w~k~~~~Pvi~~p~~~~-----~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 238 (431)
++|+|.+ +||+.+....+ ..++|||+|+ +.++|+|+|++++..+..+.+.+|+|+||++|++.+.++
T Consensus 92 -i~w~~~~-~pvl~p~~~~~~~~~~~~~~~DP~v~-~~~dg~y~m~yt~~~~~~~~i~la~S~Dl~~W~~~g~i~ 163 (356)
T 3taw_A 92 -IHFERDT-KPAFYPAKDNQAENECPGGTEDPRIA-MTEDGTYVLLYTQWNRKVPRLAVATSKDLKHWTKFGPAF 163 (356)
T ss_dssp -SSCEECS-SCSBCCCSSTTHHHHTTTEEEEEEEE-ECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred -ccceECC-cceecCCCccccccccCCceECCEEE-EECCCEEEEEEEEeCCCCceEEEEECCCCCCceEeeeEc
Confidence 6999964 79986544322 3689999965 435889999998766556789999999999999987644
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-14 Score=151.33 Aligned_cols=186 Identities=17% Similarity=0.252 Sum_probs=129.0
Q ss_pred CccCCCcceEECCEEEEEEEECCC-----C-----CCCCCcceEEEEEeCCCccceecccccCCCC----------ccCC
Q 014058 66 WINDPNGPMYYKGVYHLFYQYNPL-----G-----PLFGDKMIWAHSVSYDLINWIHLSHALCPSG----------PYDI 125 (431)
Q Consensus 66 w~NDPnG~i~~~G~YHlFyq~~P~-----~-----~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~----------~~D~ 125 (431)
+..||. +++++|+||||..+... + .... ...|.+++|+||+||+.++.++.+.. .+ .
T Consensus 21 ~~~DP~-i~~~~g~yYly~t~~~~~~~~~g~~~~~~~~~-~~~i~i~~S~DLv~W~~~g~v~~~~~~~~~~g~~~~~w-~ 97 (487)
T 3c7f_A 21 LGADPV-ALTYNGRVYIYMSSDDYEYNSNGTIKDNSFAN-LNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKW-A 97 (487)
T ss_dssp CCEEEE-EEEETTEEEEEEECCCCEECTTSCEECCCSTT-CCSEEEEEESSSSSEEEEEEECCBCSTTGGGGTCSBTT-C
T ss_pred cCCCCC-eEEECCEEEEEEcCCccccccccccccccccc-ccceEEEECCCCcCcEEccccccCCcccccccccccCc-c
Confidence 568999 67789999999997542 1 1112 45799999999999999998876652 22 2
Q ss_pred CCeEeecEEEc-cC--CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCC-CCCccCCeEEEe
Q 014058 126 NSCWSGSVTIL-PG--DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVK-DDMFRDPTTAWQ 200 (431)
Q Consensus 126 ~gv~SGsav~~-~d--g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p-~~~~-~~~~RDP~Vv~~ 200 (431)
.++|+++++.. .| |+++||||... +.+++|+|+|.. ..|++..+.|++... ++.. ....+||.|+++
T Consensus 98 ~~~WAP~v~~~~~~g~g~yylyyt~~~----~~i~va~s~~p~----Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~D 169 (487)
T 3c7f_A 98 GASWAPSIAVKKINGKDKFFLYFANSG----GGIGVLTADSPI----GPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVD 169 (487)
T ss_dssp SCCEEEEEEEEEETTEEEEEEEEESTT----BCEEEEEESSTT----CCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEEC
T ss_pred ccCcchheEEEecCCCCeEEEEEEcCC----cEEEEEEeCCCC----CCcccCCCCeEeecCCCCccCCCCccCCceEEc
Confidence 47999999763 14 69999999642 568999998874 358865456777432 2211 246799996544
Q ss_pred cCCCeEEEEEeeeeCC-----------cceEEEE-EeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccC
Q 014058 201 APDGRWRVLVGGQIDN-----------EGMAFVY-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL 268 (431)
Q Consensus 201 ~~~g~~~M~~ga~~~~-----------~G~i~ly-~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~ 268 (431)
+||++||+++..... ...+.+. -++|+..|+.....+. ...+.|+|.+++.+ |
T Consensus 170 -ddG~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~g~~~~i~---~p~~~Egp~i~k~~--G--------- 234 (487)
T 3c7f_A 170 -DDGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTID---APFMFEDSGLHKYN--G--------- 234 (487)
T ss_dssp -TTSCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTSSSEEEEEEEEC---CTTEEEEEEEEEET--T---------
T ss_pred -CCCCEEEEECCcccCccccccccccCCCceEEEEECCCeeeccCccEEec---CCceEecceEEEEC--C---------
Confidence 689999999874210 1223344 4789999976433232 23579999999997 6
Q ss_pred CCCeeeEEEEeeC
Q 014058 269 NPGVKHVLKTSLF 281 (431)
Q Consensus 269 ~~~~k~vl~~s~~ 281 (431)
+|+|++|..
T Consensus 235 ----~YYl~ys~~ 243 (487)
T 3c7f_A 235 ----TYYYSYCIN 243 (487)
T ss_dssp ----EEEEEEEEC
T ss_pred ----EEEEEEECC
Confidence 667766653
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-14 Score=153.51 Aligned_cols=177 Identities=16% Similarity=0.173 Sum_probs=125.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc------CCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY------DINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~------D~~gv~SGsav~~~d 138 (431)
|++.||+ +++++|+||||++..+ | ...|.+++|+||+||+..+.+|.+...+ ...++|+++++. .+
T Consensus 10 g~~~DP~-ii~~~~~yY~~~s~~~----~--~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 81 (533)
T 1yif_A 10 GFNPDPS-ICRAGEDYYIAVSTFE----W--FPGVQIHHSKDLVNWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSY-SD 81 (533)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E--ESBCEEEEESSSSSEEEEECSBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCe-EEEECCEEEEEEecCC----C--CCCeEEEEeCCCCCCeECCccccCcccccccCCCCCCCEECceEEE-EC
Confidence 6789999 6889999999987543 2 2358999999999999999988765322 246899999987 59
Q ss_pred CeEEEEEeeccC-C---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 139 DKPFILYTGIDA-S---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 139 g~~~l~YTg~~~-~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|+++|+||+... . ..+.+++|+|+|.. ..|++ |+... ...+||.+++ +++|++||+++...
T Consensus 82 g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~-D~dG~~Yl~~~~~~ 146 (533)
T 1yif_A 82 GKFWLIYTDVKVVDGAWKDCHNYLVTCETIN----GDWSE----PIKLN------SSGFDASLFH-DTDGKKYLLNMLWD 146 (533)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEEeccCCCCCcccccEEEEEeCCCC----CCccc----cEEcC------CCcCCCceEE-CCCCCEEEEEEecc
Confidence 999999997542 1 24678899998863 36874 44321 2468999654 46899999988432
Q ss_pred C-----CcceEEEEE-eCCCCCcEEccc--ccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 215 D-----NEGMAFVYW-SWDFIHWTKLDH--PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 215 ~-----~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
. ..+.|.+++ ++|+. +..++ .+..+....++|||.+|+.+ | +|+|++|..
T Consensus 147 ~~~g~~~~~~i~~~~l~~d~~--~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~g 204 (533)
T 1yif_A 147 HRIDRHSFGGIVIQEYSDKEQ--KLIGKPKVIFEGTDRKLTEAPHLYHIG--N-------------YYYLLTAEG 204 (533)
T ss_dssp CCTTSCSEEEEEEEEEETTTT--EECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred cccCCCCCCCEEEEEECCccC--CCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCC
Confidence 1 123466666 56653 33332 23333344589999999997 6 778877764
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-14 Score=147.70 Aligned_cols=176 Identities=18% Similarity=0.111 Sum_probs=128.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc--cC-CCCeEeecEEEc-cCCeEEE
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP--YD-INSCWSGSVTIL-PGDKPFI 143 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~--~D-~~gv~SGsav~~-~dg~~~l 143 (431)
.||. +++++|+||||.++.+....+ ...|.+++|+||+||+.++.+|.+... +. ..++|.+.++.. .+|+++|
T Consensus 25 HDPs-Ii~~~g~YYly~T~~~~~~~~--~~gi~v~sS~DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~V~y~~~dGkYYL 101 (441)
T 3nqh_A 25 HGAC-IVEENGRYYLFGEYKSDKSNA--FPGFSCYSSDDLVNWKFERVVLPMQSSGILGPDRVGERVKVMKCPSTGEYVM 101 (441)
T ss_dssp EEEE-EEEETTEEEEEEECCCSSCSS--CCCEEEEEESSSSSCEEEEEEECCCSSSTTSTTEEEEEEEEEECTTTCCEEE
T ss_pred cCCE-EEEECCEEEEEEEcCCccCCC--CCCeeEEECCCCCCcEECceeeccCCccccCCCCccCCceeEEEccCCEEEE
Confidence 3776 889999999999987654332 467999999999999999999977643 22 235799998763 5999999
Q ss_pred EEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEE
Q 014058 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 144 ~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~l 222 (431)
+||..... +.+.+++|+|++.. ..|+.. +|++.... ....+||.|+ .++||++||+++. +. +
T Consensus 102 yyt~~~~~~~~~~igVAtSdsP~----GPwt~~--gpl~~~g~---~~~~IDPsvF-~DdDGk~YL~~g~-----~~--I 164 (441)
T 3nqh_A 102 YMHADDMNYKDPHIGYATCSTIA----GEYKLH--GPLLYEGK---PIRRWDMGTY-QDTDGTGYLLLHG-----GI--V 164 (441)
T ss_dssp EEEEEETTSCSCEEEEEEESSTT----SCCEEE--EECEETTE---ECCCCSEEEE-ECTTSCEEEEEGG-----GE--E
T ss_pred EEEeCCCCCCcceEEEEEeCCCC----CCceEc--ceeecCCC---cccccCceEE-EeCCCCEEEEeCC-----Cc--E
Confidence 99986532 45788999998864 367753 47764211 1246899965 5579999999985 23 3
Q ss_pred EE-eCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 223 YW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 223 y~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
++ ++|+.++......+. .+...|||.+|+.+ | +++|++|..
T Consensus 165 ~eLs~D~~~~~g~~~~i~---~g~~~EgP~i~K~~--G-------------~YYL~~S~~ 206 (441)
T 3nqh_A 165 YRLSKDYRTAEEKVVSGV---GGSHGESPAMFKKD--G-------------TYFFLFSNL 206 (441)
T ss_dssp EEECTTSSSEEEEEESCS---TTCCCEEEEEEEET--T-------------EEEEEEECS
T ss_pred EEeCCccccccCceEEeC---CCCceECcEEEEEC--C-------------EEEEEEeCC
Confidence 44 789998864322222 23468999999987 6 788888763
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-14 Score=151.50 Aligned_cols=177 Identities=16% Similarity=0.144 Sum_probs=126.4
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc------CCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY------DINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~------D~~gv~SGsav~~~d 138 (431)
|+..||. +++++|+||||++... | ...|.+++|+||+||+.++.+|.+...+ +..++|+++++. .+
T Consensus 11 g~~~DP~-i~~~~~~yY~~~s~~~----~--~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 82 (535)
T 2exh_A 11 GFHPDPS-ICRVGDDYYIAVSTFE----W--FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SD 82 (535)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E--ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEECCCC----C--CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-EC
Confidence 6899999 6889999999987532 2 2458999999999999999988765322 346899999987 59
Q ss_pred CeEEEEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 139 DKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 139 g~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|+++|+||+.... ..+.+++|+|+|.. ..|++ |+... ...+||.+++ ++||++||+++...
T Consensus 83 g~~ylyyt~~~~~~g~~~~~~~~va~s~~~~----Gpw~~----p~~~~------~~~iDp~vf~-DddG~~Yl~~~~~~ 147 (535)
T 2exh_A 83 GKFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFH-DEDGRKYLVNMYWD 147 (535)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEEeccCCCCCccccceEEEEeCCCC----CCccc----cEecC------CCcCCCceEE-CCCCCEEEEEEecC
Confidence 9999999976431 24677899998863 35874 44321 2468999654 46899999988532
Q ss_pred C-----CcceEEEEE-eCCCCCcEEccc--ccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 215 D-----NEGMAFVYW-SWDFIHWTKLDH--PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 215 ~-----~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
. ..+.|.+++ ++|+ |+..++ .+..+....++|||.+|+.+ | +|+|++|..
T Consensus 148 ~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~g 205 (535)
T 2exh_A 148 HRVDHHPFYGIVLQEYSVEQ--KKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEG 205 (535)
T ss_dssp CCTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred CccCCCCCCcEEEEEECCcc--CCCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCC
Confidence 1 124466666 5665 454443 23333344589999999997 6 778887764
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.59 E-value=8.6e-15 Score=146.26 Aligned_cols=120 Identities=8% Similarity=0.058 Sum_probs=98.5
Q ss_pred CCccceecccccCCCC-ccCCCCeEeecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC
Q 014058 106 DLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP 184 (431)
Q Consensus 106 Dlv~W~~~~~aL~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p 184 (431)
.+++|+..| +|.|+. ++ ..|||+++++.. ||+++|||++....+.+.|++|+|+|+ .+|++.+ +|++.+.
T Consensus 35 ~~~r~~~~P-iL~p~~~~~-~~gv~n~~~i~~-~g~~~lfY~~~~~~~~~~~~~A~S~Dg-----i~w~~~~-~pvl~p~ 105 (338)
T 1vkd_A 35 PVWRYSKNP-IIGRNPVPK-GARVFNSAVVPY-NGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQWVD 105 (338)
T ss_dssp SEEECTTCC-SBCBSCSTT-EEEEEEEEEEEE-TTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCEEC
T ss_pred ceEECCCCc-eECCCCCcc-cCeEEccEEEEE-CCEEEEEEEEECCCCcEEEEEEEeCCC-----CccEECC-CCEEeCC
Confidence 578888777 888984 67 689999999875 999999999987667789999999986 6999864 7888544
Q ss_pred --CCCCCCCcc-CCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccc
Q 014058 185 --NGVKDDMFR-DPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHP 237 (431)
Q Consensus 185 --~~~~~~~~R-DP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 237 (431)
...+..++| ||+|+.. +|+|||++++ ....+.+.+++|+|+++|++.+.+
T Consensus 106 ~~~~~~~~g~~yDP~v~~~--~d~yym~yt~-~~~~~~i~la~S~Dl~~W~~~~~i 158 (338)
T 1vkd_A 106 VNGEPFQPSYAYDPRVVKI--EDTYYITFCT-DDHGPTIGVGMTKDFKTFVRLPNA 158 (338)
T ss_dssp TTSCBCCCSSEEEEEEEEE--TTEEEEEEEE-ESSSEEEEEEEESSSSSEEEECCS
T ss_pred CCCccccCCEEeCcEEEEE--CCEEEEEEEE-cCCcceEEEEEECCCCeEEECCcc
Confidence 334567899 9996543 6899999998 656678999999999999997643
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.2e-15 Score=147.74 Aligned_cols=123 Identities=18% Similarity=0.224 Sum_probs=97.5
Q ss_pred ccceecccccCCCC-------------ccCCCCeEeecEEEccCCeEEEEEeeccCC------CceeEEEEEecCCCCCc
Q 014058 108 INWIHLSHALCPSG-------------PYDINSCWSGSVTILPGDKPFILYTGIDAS------GQQVQNLAMPENLSDPL 168 (431)
Q Consensus 108 v~W~~~~~aL~P~~-------------~~D~~gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~lA~S~D~~d~~ 168 (431)
.+++...++|.|+. .||..+||+|+++. .||+++||||+.... +.+.+++|+|+|+
T Consensus 20 ~r~~~~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai~-~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DG---- 94 (364)
T 3qc2_A 20 ERPKNVNPVISPIENTKFYCPLTKDSIAWESNDTFNPAATL-YNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDG---- 94 (364)
T ss_dssp BCCTTTCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEEE-ETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSS----
T ss_pred eeCCCCCCeEecCCcccccccccccccccccCceECceEEE-ECCEEEEEEEEECCCCcccCCCceEEEEEEeCCC----
Confidence 44444357899986 68999999999987 599999999997653 4588999999996
Q ss_pred cceeeeecCCcEEcCCCCCCC-----CCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEccccc
Q 014058 169 LKDWVKFSGNPVMTPPNGVKD-----DMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (431)
Q Consensus 169 l~~w~k~~~~Pvi~~p~~~~~-----~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 238 (431)
++|++. .+||+.+....+. .++|||+|+ +.++|+|+|++++.....+++.+++|+|+++|++.+.++
T Consensus 95 -i~w~~~-~~Pvl~P~~~~~~~~e~~~gv~DP~v~-~~edG~yym~Yta~~~~~~~i~lA~S~Dl~~W~k~g~i~ 166 (364)
T 3qc2_A 95 -THFQRE-KTPVFYPDNDSQKELEWPGGCEDPRIA-VTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAF 166 (364)
T ss_dssp -SSCEEC-SSCSBCCCSSTTHHHHTTTEEEEEEEE-ECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred -ceeeEc-CcCeEcCCCccccccccCCcEECCEEE-EeCCCEEEEEEEecCCCCeEEEEEEECCCCEEEEeeecc
Confidence 799986 4688865443332 579999965 435899999999876556789999999999999987544
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=3e-13 Score=136.97 Aligned_cols=154 Identities=16% Similarity=0.228 Sum_probs=107.8
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCC-CCCcceEEEEEeCCC-ccceecc-cccCCCC------------------ccCC
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPL-FGDKMIWAHSVSYDL-INWIHLS-HALCPSG------------------PYDI 125 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~-wg~~~~WgHa~S~Dl-v~W~~~~-~aL~P~~------------------~~D~ 125 (431)
+..|. +++.+|+|+|||..+..... .. ...+++|+|+|+ .+|++.+ +.|.|.. .++.
T Consensus 125 vwaPs-vi~~dGkyyL~Yt~~~~~~~~~~-~~~igvA~Sdd~~Gpw~~~~~Pvi~~~~~~~w~~ddd~~~~~~~~~~~d~ 202 (374)
T 3r4z_A 125 VFTPE-VLRHNGTYYLVYQTVKAPYLNRS-LEHIAIAYSDSPFGPWTKSDAPILSPENDGVWDTDEDNRFLVKEKGSFDS 202 (374)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCCTTC-CBEEEEEEESSTTCCCEECSSCSBCCCCCSEECSSSSCTTCEEECCSTTS
T ss_pred EECCE-EEEECCEEEEEEEeccCCCCCCC-cceEEEEEECCCCCCeEECCCCEeCCCcCCceeecCCceEEEecCCcccc
Confidence 33565 67889999999997643221 12 578999999997 6899875 4454432 2344
Q ss_pred CCeEeecEEEccCCeEEEEEeeccCC-------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEE
Q 014058 126 NSCWSGSVTILPGDKPFILYTGIDAS-------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTA 198 (431)
Q Consensus 126 ~gv~SGsav~~~dg~~~l~YTg~~~~-------~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv 198 (431)
.+++.++++. .+|+++|+|++.... +.+.+++|+|++.. ..|+|.+.+||+.. -+||+ |
T Consensus 203 ~~~~~P~v~~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~----Gpw~~~~~~Pi~~~--------~~dp~-V 268 (374)
T 3r4z_A 203 HKVHDPCLMF-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPL----GPYTKSEYNPITNS--------GHEVA-V 268 (374)
T ss_dssp SEEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTT----CCCEECTTCCCCSS--------CSSCC-E
T ss_pred CccccceEEE-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCC----CCCEECCCCCEeCC--------CCCCc-e
Confidence 5677887765 699999999997532 13679999998753 36999888899852 24999 4
Q ss_pred EecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccc
Q 014058 199 WQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLY 239 (431)
Q Consensus 199 ~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~ 239 (431)
|.. +++|+++++....+.+ .++.|+|+++|++.+.+..
T Consensus 269 ~~~-~~g~~~mv~~~g~~~~--~l~~S~Dg~~W~~~~~i~~ 306 (374)
T 3r4z_A 269 WPY-KGGMATMLTTDGPEKN--TCQWAEDGINFDIMSHIKG 306 (374)
T ss_dssp EEE-TTEEEEEECSSSTTCS--EEEEETTSSSCEEEEECSC
T ss_pred EEe-CCEEEEEEEecCCCce--EEEECCCcCCeEEcceecc
Confidence 664 4556555554333344 5677999999999987544
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.9e-13 Score=141.12 Aligned_cols=185 Identities=16% Similarity=0.114 Sum_probs=125.8
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC--ccCCCCeEeecEEEc-cCCeEEE
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--PYDINSCWSGSVTIL-PGDKPFI 143 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~--~~D~~gv~SGsav~~-~dg~~~l 143 (431)
..||. +++++|+||||........ . ...+..++|+||+||+..+.+|.+.. .++..++|.+.++.. .+|+++|
T Consensus 58 a~DP~-Ii~~~g~YY~~~T~~~~~~--~-~~gi~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~~WAP~v~~~~~~Gkyym 133 (526)
T 3vsf_A 58 AHGGG-MLKHGDYYYWYGEYRDDSN--L-FLGVSCYRSKDLVNWEYRGEVLSRNSAPELNHCNIERPKVMYNASTGEFVM 133 (526)
T ss_dssp CEEEE-EEEETTEEEEEEEEECTTS--S-EEEEEEEEESSSSSCEEEEEEEETTSSGGGSSCEEEEEEEEECTTTCCEEE
T ss_pred ccCCe-EEEECCEEEEEEecCCCCC--C-cCcEEEEECCCCCCcCCCCccCCCCCCcCcccCceECCEEEEECCCCEEEE
Confidence 45998 7889999999998753221 2 45789999999999999999887654 345567999999864 3899999
Q ss_pred EEeeccC--CCceeEEEEEecCCCCCccceeeeec-CCcEEcC---CCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCc
Q 014058 144 LYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFS-GNPVMTP---PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (431)
Q Consensus 144 ~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~-~~Pvi~~---p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~ 217 (431)
||+.... ...+.+++|+|++.. ..|+... ..|+... +.+......+||.| |.+++|++||++++.. .
T Consensus 134 y~~~~~~~~~~~~~igvats~~p~----Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~v-f~D~dG~~Yl~~~~~~--~ 206 (526)
T 3vsf_A 134 WMHWENGINYGQARAAVAYSKTPD----GKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNV-FVDTDGKGYFISAANE--N 206 (526)
T ss_dssp EEEEECSSCSCCCEEEEEEESSSS----SCCEEEEEECSSCTTCCEETTEESCCCCSEEE-EECTTSCEEEEEEETT--T
T ss_pred EEEeeCCCCCCcceEEEEEcCCCC----CCCEeccccccccccccccCCCCCcccccccE-EECCCCCEEEEEEecC--C
Confidence 9996421 135788999998874 3566431 1233211 01111245699996 4557999999998643 2
Q ss_pred ceEEEEE-eCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEee
Q 014058 218 GMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (431)
Q Consensus 218 G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 280 (431)
+.+.+++ ++|+..+......+. .+...|+|.+|+.+ | +|+|++|.
T Consensus 207 ~~i~i~~l~~d~~~~~~~~~~~~---~g~~~EgP~i~k~~--G-------------~YYL~~S~ 252 (526)
T 3vsf_A 207 MDLHLYELTPDYKNIASLKAKLF---VGQQREAPCLIKRN--G-------------YYYLITSG 252 (526)
T ss_dssp TEEEEEEECTTSSSEEEEEEEES---TTSCCEEEEEEESS--S-------------CEEEEEEC
T ss_pred CceEEEEcCCCcccccCceEEeC---CCCCcCCeEEEEEC--C-------------EEEEEEcC
Confidence 3344554 577776654322222 23568999999986 5 77887774
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-12 Score=133.34 Aligned_cols=155 Identities=19% Similarity=0.221 Sum_probs=108.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCC-CCCcceEEEEEeCC-Cccceecc-cccCCCC------------------ccCC
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPL-FGDKMIWAHSVSYD-LINWIHLS-HALCPSG------------------PYDI 125 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~-wg~~~~WgHa~S~D-lv~W~~~~-~aL~P~~------------------~~D~ 125 (431)
+.+|. +++++|+|+|||..+..... .+ ...+|.|+|+| .-.|++.+ ++|.|.. .+|.
T Consensus 165 v~aP~-Vi~~~Gkyym~Yt~~~~~~~~~~-~~~IgvA~Sdsp~Gpwt~~~~Pvl~~~~~~~W~~ddd~~~~~~~~~~wD~ 242 (404)
T 4ak5_A 165 VFTPE-VMEWKGKYYLCYQAVKSPYTVRV-KNTIGMACADSPEGLWTKTDKPVLEPSDTGEWEGDEDNRFKVVSKGDFDS 242 (404)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSCCCTTC-CCEEEEEEESSTTCCCEECSSCSBCCCSCCEECSSSSCTTCEEECCSTTS
T ss_pred EEeeE-EEEECCEEEEEEEeccCCCCCCC-cceEEEEEEeCCCCCceECCCceecCCCCcceeeccCceeeeccCCcccC
Confidence 44666 67889999999987643211 12 56799999986 24899875 4555542 2455
Q ss_pred CCeEeecEEEccCCeEEEEEeeccCC-------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEE
Q 014058 126 NSCWSGSVTILPGDKPFILYTGIDAS-------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTA 198 (431)
Q Consensus 126 ~gv~SGsav~~~dg~~~l~YTg~~~~-------~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv 198 (431)
.+++.++++. .+|+++|+|++.... +.+.+++|+|+|.. ..|+|.+.|||+... .+++ |
T Consensus 243 ~~~~~P~v~~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPv~~~~--------~e~~-V 308 (404)
T 4ak5_A 243 HKVHDPCIIP-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPM----GPYVKSEYNPISNSG--------HEVC-V 308 (404)
T ss_dssp SEEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSSC--------SSCC-E
T ss_pred CcEECCEEEE-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCC----CCcEECCCCceecCC--------Ccce-E
Confidence 6788898776 699999999998532 14689999998863 479998889998521 2567 6
Q ss_pred EecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEccccccc
Q 014058 199 WQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYS 240 (431)
Q Consensus 199 ~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~ 240 (431)
|.+.+|.|+|+. ....+.| .++.|+|+++|++.+.+...
T Consensus 309 w~~~dg~~~ll~-~~g~~~g--~l~~S~Dg~~W~~~~~l~~~ 347 (404)
T 4ak5_A 309 WPYKGGIASLIT-TDGPEKN--TLQWSPDGINFEIMSVVKGA 347 (404)
T ss_dssp EEETTEEEEEEC-SSSTTCS--EEEEESSSSCCEEEEECSCC
T ss_pred EEeCCcEEEEEE-ecCCCce--EEEECCCCCeEEEeeeeccC
Confidence 885554446654 3233455 56779999999999875543
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=99.38 E-value=9.4e-12 Score=129.54 Aligned_cols=179 Identities=19% Similarity=0.267 Sum_probs=113.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc--------------c-CCCCeEee
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP--------------Y-DINSCWSG 131 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~--------------~-D~~gv~SG 131 (431)
.-||. +++++|+|+||.. +...++|+||+||+.++.+|.+... + ...++|.+
T Consensus 36 ~~DPs-ii~~~g~YYl~~T------------~~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~l~~~~~w~~~~~~WAP 102 (470)
T 2x8s_A 36 VHDPS-IIETNGTFYVFGS------------HLASAKSNDLMQWQQLTTSVSNDNPLIPNVYEELKETFEWAQSDTLWAA 102 (470)
T ss_dssp CSSCE-EEEETTEEEEECS------------TTCEEEESSSSBCEEEECSCSTTCTTSTTHHHHTHHHHHHHTCSSCCCC
T ss_pred CCCCE-EEEECCEEEEEEC------------cCceEECCCcccceeccccccccccccccccccccccccccCCCceECC
Confidence 56998 7888999999732 1135899999999999887754321 1 23589999
Q ss_pred cEEEccCCeEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCC-----CC--C---CCCCccCCeEEEe
Q 014058 132 SVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-----NG--V---KDDMFRDPTTAWQ 200 (431)
Q Consensus 132 sav~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p-----~~--~---~~~~~RDP~Vv~~ 200 (431)
+++..+||+++|||+..... ....+++|+|+|.. ..|+.. +.++.... .+ + .....+||.|++.
T Consensus 103 ~vi~~~dGkyylyys~~~~~~~~~~IgvatSddp~----GPw~~~-g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf~D 177 (470)
T 2x8s_A 103 DVTQLADGKYYMYYNACRGDSPRSAMGVAVADNIE----GPYKNK-GIFLKSGMEGTSSDGTPYDATKHPNVVAPHTFFD 177 (470)
T ss_dssp EEEECTTSCEEEEEEEECSSSCCEEEEEEEESSTT----CCCEEE-EEEEEECCSSBCTTSSBCCTTTSCCSCCCEEEEC
T ss_pred eEEEecCCEEEEEEEeccCCCCccEEEEEEeCCCC----CCceeC-CeeeccCcccccccccccccccCCCCCCCCEEEc
Confidence 98775689999999976432 45678899998864 368875 23443310 00 1 1235789996554
Q ss_pred cCCCeEEEEEeeeeCCcceEEEEEe-CCCC---CcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEE
Q 014058 201 APDGRWRVLVGGQIDNEGMAFVYWS-WDFI---HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVL 276 (431)
Q Consensus 201 ~~~g~~~M~~ga~~~~~G~i~ly~S-~Dl~---~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl 276 (431)
++|++||++|... +.|.+.+- +|.. .++..+..+. .......|.|.+|.....| +|+|
T Consensus 178 -dDG~~Yl~~g~~~---~gI~~~eL~~d~~~~~~~~~~~~~i~-~g~~~~~EGP~i~~~K~~G-------------~YYL 239 (470)
T 2x8s_A 178 -KDGKLWMVYGSYS---GGIFILEMNPKTGFPLPGQGYGKKLL-GGNHSRIEGPYVLYNPDTQ-------------YYYL 239 (470)
T ss_dssp -TTSCEEEEECBST---TCEEEEEBCTTTSSBCTTCTTCEEEE-CCSSCSEEEEEEEEETTTT-------------EEEE
T ss_pred -CCCCEEEEeeecC---CcEEEEEECCccCcCcCCcccceEec-CCCCCceeccEEEEEccCC-------------EEEE
Confidence 6899999998642 33455553 3321 1110011111 1123468999999543224 8888
Q ss_pred EEeeC
Q 014058 277 KTSLF 281 (431)
Q Consensus 277 ~~s~~ 281 (431)
++|..
T Consensus 240 ~~S~g 244 (470)
T 2x8s_A 240 YLSYG 244 (470)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 88864
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-11 Score=129.48 Aligned_cols=177 Identities=16% Similarity=0.157 Sum_probs=121.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc------cCCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP------YDINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~------~D~~gv~SGsav~~~d 138 (431)
|+..||. +++++|+|+||.... .| ...+..++|+||+||+..+.+|.+... .+..++|.++++. .+
T Consensus 10 ~~~~DP~-i~~~~~~yY~~~s~~----~~--~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 81 (538)
T 3c2u_A 10 GFNPDPS-IVRAGDDYYIATSTF----EW--FPGVQIHHSKDLVHWHLVAHPLSTTEFLDMKGNPDSGGIWAPDLSY-AD 81 (538)
T ss_dssp SSCCSCE-EEEETTEEEEEECCB----TE--ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEEccC----CC--CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-EC
Confidence 6788999 788999999986532 12 235788999999999999988865431 1246799999876 59
Q ss_pred CeEEEEEeeccC-C---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 139 DKPFILYTGIDA-S---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 139 g~~~l~YTg~~~-~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|+++|+||.... . ..+.+++|+|+|.. ..|++ |+... ...+||.+++. +||+.||+.+...
T Consensus 82 g~~yly~t~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~D-ddG~~Yl~~~~~~ 146 (538)
T 3c2u_A 82 GKFWLIYTDVKVVDGMWKDCHNYLTTAEDIK----GPWSK----PILLN------GAGFDASLFHD-PSGKKYLVNMYWD 146 (538)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----CCCCC----CEEEE------CSCSCCEEEEC-TTSCEEEEEEEEC
T ss_pred CEEEEEEEeccCCCCCcccccEEEEEECCCC----CCccc----cEecC------CCcCCCeeEEC-CCCCEEEEEEecC
Confidence 999999997542 1 24567899998864 35874 44321 13579996544 6899999987432
Q ss_pred C-----CcceEEEEE-eCCCCCcEEccc--ccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 215 D-----NEGMAFVYW-SWDFIHWTKLDH--PLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 215 ~-----~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
. ..+.|.+.+ +.|. ++..++ .+..+......|+|.+++.+ | +|+|++|..
T Consensus 147 ~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~g 204 (538)
T 3c2u_A 147 QRVYHHNFYGIALQEYSVAE--EKLIGKPEIIYKGTDIAYTEGPHLYYIN--D-------------MYYLMTAEG 204 (538)
T ss_dssp CCTTSCSEEEEEEEEEETTT--TEECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred CccCCCCCCCEEEEEECCcc--CCCCCCCEEEecCCCCCccccceEEEEC--C-------------EEEEEEecC
Confidence 1 123456666 4554 454443 23333334579999999987 6 778887764
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=5.7e-09 Score=110.34 Aligned_cols=173 Identities=12% Similarity=0.086 Sum_probs=111.2
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC---c---------cCCCCeEeec
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG---P---------YDINSCWSGS 132 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~---~---------~D~~gv~SGs 132 (431)
|+.-||. +++++|+|+||-... .+ ...+...+|+||+||+..+.+|.... . ....|+|.++
T Consensus 15 g~~~DP~-iir~~~~YY~~~st~----~~--~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~WAP~ 87 (542)
T 3zxk_A 15 EDHPALE-VFRVGSVFYYSSSTF----AY--SPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGAYVKGIWAST 87 (542)
T ss_dssp SCCCSCE-EEEETTEEEEECCCB----TE--ESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTTTTCSBCSCE
T ss_pred CCCCCCe-EEEECCEEEEEEecC----cc--CCCeEEEEcCCCCCccccccccccCCccccccccCCcccccCCceECCc
Confidence 4568999 788999999984211 11 12477889999999999998875421 1 1136899999
Q ss_pred EEEcc-CCeEEEEEeeccCCCceeEEEEEecCCCCCc-----cce---eeeecCCcEEcCCCCCCCCCccCCeEEEecCC
Q 014058 133 VTILP-GDKPFILYTGIDASGQQVQNLAMPENLSDPL-----LKD---WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD 203 (431)
Q Consensus 133 av~~~-dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~-----l~~---w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~ 203 (431)
+...+ +|+++|+|+.. ..+++|+|++..+|+ |++ |++. +... ....||.+++ ++|
T Consensus 88 i~~~~~~G~fYly~~~~-----~~~~v~~a~~p~GPf~~g~~l~~~~~ws~~----~~~~------~~~iDp~~f~-DdD 151 (542)
T 3zxk_A 88 LRYRRSNDRFYWYGCVE-----GRTYLWTSPGGNALANNGEVPPSAWNWQHT----ATID------NCYYDAGLLI-DDD 151 (542)
T ss_dssp EEEETTTTEEEEEEEET-----TEEEEEEEECTTGGGTTTCCCGGGCCCEEE----EEES------SCCTTCEEEE-CTT
T ss_pred EEEECCCCEEEEEEECC-----CcEEEEEECCCCCCccccccccccCccccc----cccC------CCCCCCcEEE-cCC
Confidence 87642 49999999863 457889998876542 011 6542 1111 2346999655 479
Q ss_pred CeEEEEEeeeeCCcceEEEEE-eCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEee
Q 014058 204 GRWRVLVGGQIDNEGMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (431)
Q Consensus 204 g~~~M~~ga~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~ 280 (431)
|+.||++|. +.|.+.+ ++|+..=.-....+.....+...|-|-+++.+ | +++|++|.
T Consensus 152 G~~Yl~~g~-----~~i~~~eL~~d~~~~~~~~~~i~~~~~g~~~EgP~i~k~~--G-------------~YYL~~s~ 209 (542)
T 3zxk_A 152 DTMYIAYGN-----PTINVAQLSPDGTRQVRVQQRVYAHPQGQTVEGARMYKIR--G-------------NYYILVTR 209 (542)
T ss_dssp SCEEEEECS-----SSEEEEEECTTSSSEEEEEEEEECCTTCCCCEEEEEEEET--T-------------EEEEEEEE
T ss_pred CCEEEEEcC-----CCEEEEEeCCccCcccCCcEEEEeCCCCccccccEEEEEC--C-------------EEEEEEEe
Confidence 999999974 2344554 45654322111113222233478999999987 6 66666665
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=5.8e-09 Score=108.37 Aligned_cols=178 Identities=16% Similarity=0.118 Sum_probs=115.7
Q ss_pred cCCCcceE-ECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceeccccc--CCC-CccCCCCeEeecEEEccCCeEEE
Q 014058 68 NDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPS-GPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 68 NDPnG~i~-~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL--~P~-~~~D~~gv~SGsav~~~dg~~~l 143 (431)
-||. +++ .+|+|+||.... . ...+..++|+||+||+..+.++ .+. ......++|.+.++. .||+++|
T Consensus 20 ~DP~-iir~~dg~YY~~~T~~----~---~~~i~i~~S~DLv~W~~~~~~~~w~~~~~~~~~~~~WAP~v~~-~~Gkyyl 90 (468)
T 3akh_A 20 ADPH-IFKHTDGYYYFTATVP----E---YDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHF-IDGKWYV 90 (468)
T ss_dssp EEEE-EEECTTSCEEEEEECT----T---CCEEEEEEESSTGGGGGCCCEEEEECCSSSTTCEEEEEEEEEE-ETTEEEE
T ss_pred CCCE-EEEecCCEEEEEEEeC----C---CCCEEEEECCCccccccCCCcceecCCCCCCCCCCEecceEEE-ECCEEEE
Confidence 7998 677 599999998752 1 2468999999999999987543 221 122346799999876 4999999
Q ss_pred EEeeccCC--CceeEEEEE--ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC---C
Q 014058 144 LYTGIDAS--GQQVQNLAM--PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---N 216 (431)
Q Consensus 144 ~YTg~~~~--~~~~q~lA~--S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~---~ 216 (431)
+|+..... ....+++|+ ++|. .-..|+... .++.+. + ....||.+++ ++|++||+++.... .
T Consensus 91 yys~~~~~~~~~~~i~va~~~s~dp---~~Gpw~~~g--~~~~~~-~---~~~IDp~vf~--ddG~~Yl~~g~~~~~~~~ 159 (468)
T 3akh_A 91 YFAAGSTSDVWAIRMYVLESGAANP---LTGSWTEKG--QIATPV-S---SFSLDATTFV--VNGVRHLAWAQRNPAEDN 159 (468)
T ss_dssp EEEEECSSCTTCCEEEEEEECCSCT---TTSCCEEEE--ECCCSS-C---SCEEEEEEEE--ETTEEEEEEEECCTTSSS
T ss_pred EEEeECCCCCCceeEEEEEccCCCC---CCCCCcccc--eeecCC-C---CCcCcCeEEE--ECCEEEEEEEccCCCCCC
Confidence 99976432 134566776 5553 114788642 233221 1 2457999654 58999999986431 2
Q ss_pred cceEEEEEeCCCCCcEEcccc--cccCC------CCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC
Q 014058 217 EGMAFVYWSWDFIHWTKLDHP--LYSVQ------ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (431)
Q Consensus 217 ~G~i~ly~S~Dl~~W~~~~~~--l~~~~------~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 282 (431)
.+.|.+.+.+|. |+..+++ +..+. .....|-|.+++.+ | +++|++|...
T Consensus 160 ~~~i~i~~l~~~--~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~--G-------------~YYL~ys~~g 216 (468)
T 3akh_A 160 NTSLFIAKMANP--WTISGTPTEISQPTLSWETVGYKVNEGPAVIQHG--G-------------KVFLTYSASA 216 (468)
T ss_dssp SBEEEEEEEEET--TEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCcEEEEEeCCC--ceecCccEEecCCCcccccCCCccccCCEEEEEC--C-------------EEEEEEEeCC
Confidence 245667777653 6654432 22111 12368999999976 5 7888888643
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.88 E-value=4e-08 Score=96.94 Aligned_cols=183 Identities=13% Similarity=0.115 Sum_probs=109.1
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccc--cC-CCCccCCCCeEeecEEEccCCeEEEE
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHA--LC-PSGPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~a--L~-P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
-||. ++.++++|+||+..... .-.+....|+||++|+..+.. +. +.......++|.+.++. .||+++|+
T Consensus 18 aDP~-ii~~~d~yY~~~st~~~------~~g~~i~~S~DL~~w~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yyly 89 (330)
T 3k1u_A 18 ADPM-IYKHNDGYYYFTASVPE------YDRIEVRKAKTIEGLRNAEPVDVWRRHESGEMSNLIWAPEIHF-INGAWYIY 89 (330)
T ss_dssp EEEE-EEECTTSCEEEEEECTT------CCEEEEEEESSTGGGTTSCCEEEEECCSSSTTSEEEEEEEEEE-ETTEEEEE
T ss_pred CCCE-EEEECCEEEEEEeccCC------CCCEEEEEcCCcCCccCCcceeecccCCCCccCCCeECCEEEE-ECCeEEEE
Confidence 6998 78889999999886542 235677899999999976532 22 22333346799999876 59999999
Q ss_pred EeeccCC-----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee--CCc
Q 014058 145 YTGIDAS-----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI--DNE 217 (431)
Q Consensus 145 YTg~~~~-----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~--~~~ 217 (431)
||..... .......+++.+..+|+-..|+.. ..+....+ ..-.||.|+ .+.+++|+|+.+... ...
T Consensus 90 ys~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~---~~~~~~~~---~~~IDp~vf-~Ddd~~~~~~~~~~~~~~~~ 162 (330)
T 3k1u_A 90 FAAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEK---GRIKTAWE---SFSLDATIF-EHNEKLYYVWAQQDINIKGH 162 (330)
T ss_dssp EEEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEE---EECCCSSC---SCEEEEEEE-EETTEEEEEEEECCTTSSSS
T ss_pred EEeccCCCCCCcccceeeeEEEeCCCCCcccccccc---ccccCCCC---CCccCceEE-EECCccEEEEeecCCCcCCC
Confidence 9965431 112233455544445544456643 12211111 234699965 445666666654432 123
Q ss_pred ceEEEEEeCCCCCcEEcccc--cccC------CCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC
Q 014058 218 GMAFVYWSWDFIHWTKLDHP--LYSV------QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (431)
Q Consensus 218 G~i~ly~S~Dl~~W~~~~~~--l~~~------~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 282 (431)
+.|.+.+-++- ++..+++ +... ......|-|.+++.+ | +++|++|...
T Consensus 163 ~~i~i~~l~~~--~~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~--G-------------~YYL~ys~~~ 218 (330)
T 3k1u_A 163 SNIYIAEMENP--WTLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN--G-------------KIFITYSASA 218 (330)
T ss_dssp BEEEEEEEEET--TEECSCCEEEECSCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred ceEEEEECCCC--ccccCCcEEecCCCccccccCCceeeCCEEEEEC--C-------------EEEEEEEeCC
Confidence 34555554332 3444432 1111 122356999999987 5 8888888653
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.3e-06 Score=85.55 Aligned_cols=148 Identities=13% Similarity=0.037 Sum_probs=95.0
Q ss_pred cCCCcceEE----CCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceeccc-ccCCCCccCCCCeEeecEEEcc-CCe
Q 014058 68 NDPNGPMYY----KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSH-ALCPSGPYDINSCWSGSVTILP-GDK 140 (431)
Q Consensus 68 NDPnG~i~~----~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~-aL~P~~~~D~~gv~SGsav~~~-dg~ 140 (431)
..|. ++++ +|+|||||..+.... + ....+.|+|+|.. .|++++. .+.+... ....+..++++.++ ||+
T Consensus 78 wAP~-v~~~~~~~~Gkyylyyt~~~~~~--~-~~~i~va~s~~p~Gpw~~~~~p~~~~~~~-g~~~~iDp~vf~dd~dG~ 152 (311)
T 3qz4_A 78 WAPC-IEEKKIDGKYKYFFYYSANPTTN--K-GKQIGVAVADSPTGPFTDLGKPIITSSPT-GRGQQIDVDVFTDPVSGK 152 (311)
T ss_dssp EEEE-EEEEEETTEEEEEEEEEEEETTC--S-SCEEEEEEESSTTCCCEECSSCSBCSCTT-SSSBSCCCEEEECTTTCC
T ss_pred CCCe-eEEeeecCCCEEEEEEEeccCCC--C-CeeEEEEEECCCCCCceECCcceEcCCCC-CCcccccccEEEECCCCc
Confidence 4566 7788 999999999865432 2 4679999999986 8999764 3333221 11345788988876 899
Q ss_pred EEEEEeeccCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCC---CCCCccCCeEEEecCCCeEEEEEeeeeCC
Q 014058 141 PFILYTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGV---KDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (431)
Q Consensus 141 ~~l~YTg~~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~---~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~ 216 (431)
++|+|.+. .+.+|. +.|. .++... ...++. +.+. ....+.-|++ ++ .+|+|||++++....
T Consensus 153 ~yl~~g~~------~i~~~~l~~d~-----~~~~~~-~~~i~~-~~~~~~~~~~~~EgP~i-~k-~~g~YyL~~s~~~~~ 217 (311)
T 3qz4_A 153 SYLYWGNG------YMAGAELNDDM-----LSIKEE-TTVVLT-PKGGTLQTYAYREAPYV-IY-RKGIYYFFWSVDDTG 217 (311)
T ss_dssp EEEEECBS------SCEEEEBCTTS-----SSBCGG-GCEECC-CCCCCTTTTCCCEEEEE-EE-ETTEEEEEEEESCTT
T ss_pred EEEEEcCC------CEEEEEeCCcc-----cccCCC-ceEEeC-CCCCcccccceeeccEE-EE-ECCEEEEEEEcCCCC
Confidence 99999751 123343 4443 455432 123332 2221 1124567885 45 489999999876422
Q ss_pred cc--eEEEEEeCCCC-CcEEcc
Q 014058 217 EG--MAFVYWSWDFI-HWTKLD 235 (431)
Q Consensus 217 ~G--~i~ly~S~Dl~-~W~~~~ 235 (431)
.. ++.+++|+++. -|+..+
T Consensus 218 ~~~y~~~~~~S~~~~GPw~~~~ 239 (311)
T 3qz4_A 218 SPNYHVVYGTAQSPLGPIEVAK 239 (311)
T ss_dssp STTCEEEEEEESSTTCCCEEEE
T ss_pred CCCceEEEEEcCCCCCCCEeCC
Confidence 22 67789999987 498864
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.51 E-value=7.3e-06 Score=80.16 Aligned_cols=148 Identities=14% Similarity=0.157 Sum_probs=92.8
Q ss_pred cCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceeccc-ccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 68 NDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSH-ALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 68 NDPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~-aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
..|. +++. +|+|||||..+ ...+.|+|+|.. .|++... .+.. .....++++.++||+++|
T Consensus 80 wAP~-v~~~~~~g~~yl~yt~~---------~~i~va~s~~p~Gpw~~~~~~p~~~------~~~iDp~vf~D~dG~~Yl 143 (306)
T 3kst_A 80 WAPE-VYYVESKKKFYLFYSAE---------EHICVATSTTPEGPFRQEVKQPIWS------EKSIDTSLFIDDDGTPYL 143 (306)
T ss_dssp EEEE-EEEETTTTEEEEEEEET---------TEEEEEEESSTTCCCBCSSCCCSSS------SCCEEEEEEECTTSCEEE
T ss_pred ccCe-EEEECCCCEEEEEEECC---------CcEEEEEcCCCCCCcEeCCCccccC------CCcccceEEEeCCCCEEE
Confidence 3555 5577 99999999864 358999999986 8997532 1211 345789998877899999
Q ss_pred EEeeccCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCC---CCCccCCeEEEecCCCeEEEEEeeee--CCc
Q 014058 144 LYTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVK---DDMFRDPTTAWQAPDGRWRVLVGGQI--DNE 217 (431)
Q Consensus 144 ~YTg~~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~---~~~~RDP~Vv~~~~~g~~~M~~ga~~--~~~ 217 (431)
+|.... ..+.+.+|. +.|. .+|.......++.+...++ ...+.-|.+ ++ .+|+|||++++.. ...
T Consensus 144 ~~~~~~--~g~~i~~~~ls~d~-----~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i-~k-~~G~YYL~~S~~~~~~~~ 214 (306)
T 3kst_A 144 YFVRFT--DGNVIWVAQMTDDL-----MSIKTETLNQCIKAEVSWELLQGKVAEGPSL-LK-KNGVYYLIYSANHYENKG 214 (306)
T ss_dssp EEEEES--SSEEEEEEEBCTTS-----SCBCGGGCEEEECCCSGGGCSSSSBEEEEEE-EE-ETTEEEEEEEESCTTSTT
T ss_pred EEEEeC--CCCEEEEEEeCccc-----ccccCcceeeeccCCccceecCCCceecceE-EE-ECCEEEEEEEeCCCCCCC
Confidence 997532 223344454 4443 4565322222332222121 234567885 45 4899999997653 222
Q ss_pred ceEEEEEeCCCC-CcEE-ccccccc
Q 014058 218 GMAFVYWSWDFI-HWTK-LDHPLYS 240 (431)
Q Consensus 218 G~i~ly~S~Dl~-~W~~-~~~~l~~ 240 (431)
-++.+++|+++. .|+. .+.++..
T Consensus 215 y~v~~a~S~s~~GPw~~~~~~pil~ 239 (306)
T 3kst_A 215 YGVGYATSDTPMGPWVKYSKNPLLQ 239 (306)
T ss_dssp CEEEEEEESSTTCCCEECTTCCSBS
T ss_pred ceEEEEEeCCCCCCCEeCCCCeeEe
Confidence 257889999986 7998 4445544
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=98.47 E-value=2.9e-06 Score=82.20 Aligned_cols=155 Identities=13% Similarity=0.169 Sum_probs=96.6
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc--cceecccccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI--NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 66 w~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv--~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
-+..|. +++++|+|||||..+..+. . ....++|+|+|+. .|++.+..|..... +...+..++++.++||+.+|
T Consensus 72 ~~wAP~-v~~~~G~yylyyt~~~~~~--~-~~~i~va~s~~p~~Gpw~~~~~~l~~~~~-~~~~~iDp~vf~d~dG~~Yl 146 (293)
T 1uv4_A 72 NQWAPD-IQYYNGKYWLYYSVSSFGS--N-TSAIGLASSTSISSGGWKDEGLVIRSTSS-NNYNAIDPELTFDKDGNPWL 146 (293)
T ss_dssp BCEEEE-EEEETTEEEEEEEECCTTC--S-CEEEEEEEESCTTTTCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEE
T ss_pred ceecce-EEEECCEEEEEEEecCCCC--C-cceEEEEECCCCCCCCCccCCccEecCCC-CCCCCCCCCeEECCCCCEEE
Confidence 345666 7788999999999765432 2 5678999999997 99997654543221 12345678888877999999
Q ss_pred EEeeccCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-----CCc
Q 014058 144 LYTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNE 217 (431)
Q Consensus 144 ~YTg~~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-----~~~ 217 (431)
+|.+.. ..+.++. +.|. .++... ...++..+. ....+..|.+ ++ .+|+|||++.+.. +..
T Consensus 147 ~~g~~~----~~i~~~~l~~d~-----~~~~g~-~~~i~~~~~--~~~~~EgP~i-~k-~~g~yyL~~s~~~~~~g~~~~ 212 (293)
T 1uv4_A 147 AFGSFW----SGIKLTKLDKST-----MKPTGS-LYSIAARPN--NGGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNST 212 (293)
T ss_dssp EECBST----TCEEEEEECTTT-----CSEEEE-EEEEECCTT--TTTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCE
T ss_pred EEEecC----CCEEEEEECchh-----CccCCc-ceEEeecCC--CCCccCccEE-EE-ECCEEEEEEEeCCCcCCCCCc
Confidence 997532 2234443 3343 222211 112333222 1245678985 45 4899999997652 122
Q ss_pred ceEEEEEeCCCC-CcEEc-ccccc
Q 014058 218 GMAFVYWSWDFI-HWTKL-DHPLY 239 (431)
Q Consensus 218 G~i~ly~S~Dl~-~W~~~-~~~l~ 239 (431)
-++.+++|+++. -|+.. +.++.
T Consensus 213 y~~~~~~s~~~~GP~~~~~~~p~~ 236 (293)
T 1uv4_A 213 YKIAYGRSKSITGPYLDKSGKSML 236 (293)
T ss_dssp EEEEEEEESSTTCCCBCTTSCBGG
T ss_pred ceEEEEEeCCCCCCCCccCCCeee
Confidence 257889999875 68764 44544
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=2.2e-06 Score=88.02 Aligned_cols=128 Identities=9% Similarity=0.029 Sum_probs=86.3
Q ss_pred ceEECCEEEEEEEECCC-CCCCCCcceEEEEEeCCCcccee--cccccCCCCccCCCCeEeecEEEccCCeEEEEEeecc
Q 014058 73 PMYYKGVYHLFYQYNPL-GPLFGDKMIWAHSVSYDLINWIH--LSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGID 149 (431)
Q Consensus 73 ~i~~~G~YHlFyq~~P~-~~~wg~~~~WgHa~S~Dlv~W~~--~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 149 (431)
++..+|+|+|||..+.. ...+......++|+|+|+.+|++ ..++|.+.........-.+.++. ++|+++|++.+..
T Consensus 78 av~~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~-~dg~~~m~~g~~~ 156 (432)
T 1w2t_A 78 AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVLGSGK 156 (432)
T ss_dssp EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-CSSSEEEEEEEEE
T ss_pred EEEECCEEEEEEecCccCCCCCCceEEEEEEEeCCCCeEEecCCCceEeCCCccccccccCCEEEE-ECCEEEEEEEEec
Confidence 45689999999987643 11222146789999999999998 45666543211123455677665 4999999998754
Q ss_pred CCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 150 ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 150 ~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
......+.++.|+|. ++|+... ++... .+ ...+.-|.+ ++ .+|+|+|+++.+
T Consensus 157 ~~~~g~i~ly~S~Dl-----~~W~~~g--~~~~~-~~--g~~~EcP~l-f~-~~g~~vL~~s~~ 208 (432)
T 1w2t_A 157 DEKIGRVLLYTSDDL-----FHWKYEG--AIFED-ET--TKEIDCPDL-VR-IGEKDILIYSIT 208 (432)
T ss_dssp TTTEEEEEEEEESSS-----SSCEEEE--EEEEE-TT--CSCCEEEEE-EE-ETTEEEEEEEET
T ss_pred CCCCcEEEEEECCCC-----CCceEcc--ccccC-CC--CCEEECCeE-EE-ECCEEEEEEeCC
Confidence 334456778888885 7998753 44432 11 246788995 44 478999999864
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.4e-05 Score=78.33 Aligned_cols=161 Identities=11% Similarity=0.142 Sum_probs=95.9
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCC--c-c---ceecccccCCCCccCCCCeEeecEEEccCCe
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL--I-N---WIHLSHALCPSGPYDINSCWSGSVTILPGDK 140 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dl--v-~---W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~ 140 (431)
+..|. +++++|+|||||..+..+. . ....++|+|+++ . . |++.+..+.+....+......++++.++||+
T Consensus 64 ~wAP~-v~~~~g~~ylyyt~~~~~~--~-~~~igva~s~~~dp~gp~~~w~~~~~v~~~~~~~~~~~~iDp~vf~D~dG~ 139 (318)
T 1gyh_A 64 LWAPD-IYQHKGLFYLYYSVSAFGK--N-TSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQ 139 (318)
T ss_dssp EEEEE-EEEETTEEEEEEEECCTTS--C-CEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSC
T ss_pred cccCe-EEEECCEEEEEEEeccCCC--C-cceEEEEEeCCCCCCCCCcceecCCcccccCCCCCCCCcccCCeEECCCCC
Confidence 44566 7788999999999865431 2 467899999984 2 3 9987665543222222345688888877999
Q ss_pred EEEEEeeccCCCceeEEEEE-ecCCC-CCccceeeeecCC--c--EEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 141 PFILYTGIDASGQQVQNLAM-PENLS-DPLLKDWVKFSGN--P--VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 141 ~~l~YTg~~~~~~~~q~lA~-S~D~~-d~~l~~w~k~~~~--P--vi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
.+|+|.+.. ..+.+|. +.|.. -..+.+|+....+ + +.... .....+.-|.+ ++ .+|+|||++.+..
T Consensus 140 ~Yl~~g~~~----~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~--~~~~~~EgP~i-~k-~~g~yYL~~s~~~ 211 (318)
T 1gyh_A 140 VWMSFGSFW----GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQ--AGSAQIEAPFI-LR-KGDYYYLFASWGL 211 (318)
T ss_dssp EEEEECBST----TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTS--CCSCCEEEEEE-EE-ETTEEEEEEEESC
T ss_pred EEEEeeccC----CCEEEEEeCCccccccceeecceecccCcceeecccC--CCCcceeccEE-EE-ECCEEEEEEEeCC
Confidence 999997532 1233443 33311 0012356542111 1 11111 11235678885 45 4899999987631
Q ss_pred -----CCcceEEEEEeCCCC-CcEEc-ccccc
Q 014058 215 -----DNEGMAFVYWSWDFI-HWTKL-DHPLY 239 (431)
Q Consensus 215 -----~~~G~i~ly~S~Dl~-~W~~~-~~~l~ 239 (431)
...-++.+++|+++. -|+.. +.++.
T Consensus 212 ~~~g~~~~y~~~~~rS~s~~GP~~~~~g~p~~ 243 (318)
T 1gyh_A 212 CCRKGDSTYHLVVGRSKQVTGPYLDKTGRDMN 243 (318)
T ss_dssp CSCGGGCCCEEEEEEESSTTSCCBCTTSBBGG
T ss_pred CcCCCCCcceEEEEEcCCCCCCCCcCCCCEee
Confidence 122257889999875 68764 44544
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=98.23 E-value=4.7e-05 Score=74.38 Aligned_cols=156 Identities=13% Similarity=0.205 Sum_probs=92.8
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCC---cc---ceecccccCCCCccCCCCeEeecEEEccCCe
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL---IN---WIHLSHALCPSGPYDINSCWSGSVTILPGDK 140 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dl---v~---W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~ 140 (431)
+..|. +++++|+|||||..+..+. . ....++|+|+|+ -. |++.+..+.... .+......++++.++||+
T Consensus 82 ~wAP~-v~~~~g~yylyyt~~~~~~--~-~~~igva~s~~~dP~gp~~~w~~~~~~~~~~~-~~~~~~iDp~vf~D~dG~ 156 (314)
T 3cu9_A 82 LWAPD-ICFYNGIYYLYYSVSTFGK--N-TSVIGLATNQTLDPRDPDYEWKDMGPVIHSTA-SDNYNAIDPNVVFDQEGQ 156 (314)
T ss_dssp EEEEE-EEEETTEEEEEEEECCTTC--C-CEEEEEEEESCSCTTSTTCCCEEEEEEEEECT-TSSSCCCSCEEEECTTSC
T ss_pred eecCc-EEEECCEEEEEEEeccCCC--C-CceEEEEEeCCCCCCCCCcCcccCCeEecCCC-CCCCCccCCCeEEcCCCC
Confidence 44566 6788999999999865432 2 567899999984 23 998765443221 122345688888877999
Q ss_pred EEEEEeeccCCCceeEEEEEe-cCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-----
Q 014058 141 PFILYTGIDASGQQVQNLAMP-ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI----- 214 (431)
Q Consensus 141 ~~l~YTg~~~~~~~~q~lA~S-~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~----- 214 (431)
.+|+|.+.. ..+.++.. .|.+.+ ...++. ..+..... ....+.-|.+ ++ .+|+|||++.+..
T Consensus 157 ~Yl~~g~~~----~~i~~~~l~~d~~~~-~~~~~~---~~~~~~~~--~~~~~EgP~i-~k-~~G~yyL~~s~~~~~~g~ 224 (314)
T 3cu9_A 157 PWLSFGSFW----SGIQLIQLDTETMKP-AAQAEL---LTIASRGE--EPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGI 224 (314)
T ss_dssp EEEEECBST----TCEEEEECCTTTCSC-CTTCCC---EEEECCSS--SSCCEEEEEE-EE-ETTEEEEEEEESCCSSGG
T ss_pred EEEEEeccC----CcEEEEEECcccCcc-cCCCce---EEecccCC--CCCccCccEE-EE-ECCEEEEEEEcCCcccCC
Confidence 999998642 12334443 232110 001110 01111111 1235678985 45 4899999987531
Q ss_pred CCcceEEEEEeCCCC-CcEEc-ccccc
Q 014058 215 DNEGMAFVYWSWDFI-HWTKL-DHPLY 239 (431)
Q Consensus 215 ~~~G~i~ly~S~Dl~-~W~~~-~~~l~ 239 (431)
...-.+.+++|+++. -|+.. +.++.
T Consensus 225 ~~~y~~~~~~s~s~~GP~~~~~~~p~~ 251 (314)
T 3cu9_A 225 ESTYKIAVGRSKDITGPYVDKNGVSMM 251 (314)
T ss_dssp GCCCEEEEEEESSTTSCCBCTTSCBGG
T ss_pred CCcceEEEEEeCCCCCCCCcCCCCccc
Confidence 112257889999885 68865 44543
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=8.1e-05 Score=77.07 Aligned_cols=158 Identities=13% Similarity=0.227 Sum_probs=97.5
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEE--eCCC--ccceecccccCCCCccCCCCeEeecEEEccCCe
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSV--SYDL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDK 140 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~--S~Dl--v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~ 140 (431)
+-+..|. ++|++|+|+|||.....+..+ ....+.|+ |+|. -.|++++..+.|.. ..+..++++. +||+
T Consensus 74 ~~~WAP~-v~~~~Gkyylyys~~~~~~~~--~~~i~va~~~s~dp~~Gpw~~~g~~~~~~~----~~~IDp~vf~-ddG~ 145 (468)
T 3akh_A 74 AHIWAPE-IHFIDGKWYVYFAAGSTSDVW--AIRMYVLESGAANPLTGSWTEKGQIATPVS----SFSLDATTFV-VNGV 145 (468)
T ss_dssp EEEEEEE-EEEETTEEEEEEEEECSSCTT--CCEEEEEEECCSCTTTSCCEEEEECCCSSC----SCEEEEEEEE-ETTE
T ss_pred CCEecce-EEEECCEEEEEEEeECCCCCC--ceeEEEEEccCCCCCCCCCcccceeecCCC----CCcCcCeEEE-ECCE
Confidence 4456777 788999999999876533222 35567765 8886 47999876665432 3467888887 7999
Q ss_pred EEEEEeeccC--CCceeEEEEEecCCCCCccceeeeecCCcEE-cCC-CCCCC---CCccCCeEEEecCCCeEEEEEeee
Q 014058 141 PFILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-TPP-NGVKD---DMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 141 ~~l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi-~~p-~~~~~---~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
.+|+|.+... .....+.+|..++. |+.. +.++. ..+ ..++. ....-|++ ++ .+|+|||++++.
T Consensus 146 ~Yl~~g~~~~~~~~~~~i~i~~l~~~-------~~~~-g~~~~i~~~~~~we~~g~~~~EGP~i-~k-~~G~YYL~ys~~ 215 (468)
T 3akh_A 146 RHLAWAQRNPAEDNNTSLFIAKMANP-------WTIS-GTPTEISQPTLSWETVGYKVNEGPAV-IQ-HGGKVFLTYSAS 215 (468)
T ss_dssp EEEEEEECCTTSSSSBEEEEEEEEET-------TEEE-EEEEEEECCCSGGGCSSSCBEEEEEE-EE-ETTEEEEEEEES
T ss_pred EEEEEEccCCCCCCCCcEEEEEeCCC-------ceec-CccEEecCCCcccccCCCccccCCEE-EE-ECCEEEEEEEeC
Confidence 9999986432 12244556655442 2221 22332 222 11211 23567885 45 489999999765
Q ss_pred e-CCcceEEEEEeC---CCCC---cEEccccccc
Q 014058 214 I-DNEGMAFVYWSW---DFIH---WTKLDHPLYS 240 (431)
Q Consensus 214 ~-~~~G~i~ly~S~---Dl~~---W~~~~~~l~~ 240 (431)
. +..-++.+++|+ ++.. |+..+.++..
T Consensus 216 g~~~~y~v~~a~s~~~~~~~gP~~w~~~~~pvl~ 249 (468)
T 3akh_A 216 ATDANYCLGMLSASASADLLNAASWTKSSQPVFK 249 (468)
T ss_dssp CSSTTCEEEEEEEETTSCTTSGGGCEECSSCSBC
T ss_pred CCCCCceEEEEEECCCCCCCCcHHhccCCceEEE
Confidence 4 222267788886 6654 9877655543
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=6.9e-05 Score=73.23 Aligned_cols=145 Identities=6% Similarity=-0.085 Sum_probs=90.5
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCC-ccceec-cc-ccCCCC---ccCCCCeEeecEEEccCCe
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHL-SH-ALCPSG---PYDINSCWSGSVTILPGDK 140 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dl-v~W~~~-~~-aL~P~~---~~D~~gv~SGsav~~~dg~ 140 (431)
+.-|. +++++|+|||||..+..+..+ ....+.|+|+|. -.|++. +. .+.... .........+++++++||+
T Consensus 75 ~WAP~-i~~~~Gkyylyyt~~~~~~~~--~~~i~va~s~~p~Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf~DddG~ 151 (307)
T 3qee_A 75 AWASQ-VIERNGKFYWYVTVRHDDTKP--GFAIGVAVGDSPIGPFKDALGKALITNDMTTDTPIDWDDIDPSVFIDDDGQ 151 (307)
T ss_dssp EEEEE-EEEETTEEEEEEEEEECTTSC--SEEEEEEEESSTTCCCEESSSSCSBCGGGCCSSCCSCCSCCCEEEECTTSC
T ss_pred ccCce-EEEECCEEEEEEEeccCCCCC--ceEEEEEEECCCCCCCEeCCCCeeEecCccccCCCCcCcccCceEECCCCC
Confidence 44566 778999999999987544332 367899999996 489983 43 332110 0011235678888877899
Q ss_pred EEEEEeeccCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcce
Q 014058 141 PFILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGM 219 (431)
Q Consensus 141 ~~l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~ 219 (431)
.+|+|.+.. ..++ .+.|. .+|.... ..+..+ ...+.-|.+ ++ .+|+|||++++. ..-+
T Consensus 152 ~Yl~~g~~~------i~~~~l~~d~-----~~~~g~~--~~i~~~----~~~~EgP~i-~k-~~g~YyL~~s~~--~~~~ 210 (307)
T 3qee_A 152 AYLFWGNTR------PRYAKLKKNM-----VELDGPI--RAIEGL----PEFTEAIWV-HK-YQDNYYLSYAMG--FPEK 210 (307)
T ss_dssp EEEEECSSS------CEEEEECTTS-----SSEEEEE--EECCCC----TTEEEEEEE-EE-CC-CEEEEEEET--TTTE
T ss_pred EEEEEeCCc------EEEEEECCcc-----ccccCce--EEeCCC----CCccCceEE-EE-ECCEEEEEEECC--CCcE
Confidence 999997531 1223 34443 4554321 122211 124568884 55 589999999874 2335
Q ss_pred EEEEEeCCCC-CcEEcc
Q 014058 220 AFVYWSWDFI-HWTKLD 235 (431)
Q Consensus 220 i~ly~S~Dl~-~W~~~~ 235 (431)
+.+++|+++. -|+..+
T Consensus 211 ~~~~~s~~~~GP~~~~~ 227 (307)
T 3qee_A 211 IGYAMGKSIKGPWVYKG 227 (307)
T ss_dssp EEEEEESSTTCCCEEEE
T ss_pred EEEEECCCCCCCcEECC
Confidence 7788999986 798764
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=7.3e-05 Score=78.54 Aligned_cols=167 Identities=16% Similarity=0.176 Sum_probs=101.3
Q ss_pred ccCCCcceEE--CCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccccCCCC---ccC----CCCeEeecEEEc
Q 014058 67 INDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSG---PYD----INSCWSGSVTIL 136 (431)
Q Consensus 67 ~NDPnG~i~~--~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~---~~D----~~gv~SGsav~~ 136 (431)
+.-|. ++|+ +|+|||||.... +..++ ....+.|+|+|.. .|++.+. +.|.. ..| ...+..++++++
T Consensus 117 ~WAP~-v~~~~~~Gkyymy~~~~~-~~~~~-~~~igvats~~p~Gpw~~~g~-~~p~~~~g~~~~~~~~~~~iDp~vf~D 192 (526)
T 3vsf_A 117 IERPK-VMYNASTGEFVMWMHWEN-GINYG-QARAAVAYSKTPDGKFTYIRS-FRPMQDTGVMDHGLPGYMSRDCNVFVD 192 (526)
T ss_dssp EEEEE-EEECTTTCCEEEEEEEEC-SSCSC-CCEEEEEEESSSSSCCEEEEE-ECSSCTTCCEETTEESCCCCSEEEEEC
T ss_pred eECCE-EEEECCCCEEEEEEEeeC-CCCCC-cceEEEEEcCCCCCCCEeccc-cccccccccccCCCCCcccccccEEEC
Confidence 34555 6665 899999998762 22344 5789999999987 7997653 12211 111 234577888888
Q ss_pred cCCeEEEEEeeccCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC
Q 014058 137 PGDKPFILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID 215 (431)
Q Consensus 137 ~dg~~~l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~ 215 (431)
+||+.+|+|.+... ..+.++ .+.|. ..+... +...-+ ......|++ ++ .+|+|||++.....
T Consensus 193 ~dG~~Yl~~~~~~~---~~i~i~~l~~d~-----~~~~~~---~~~~~~----g~~~EgP~i-~k-~~G~YYL~~S~~tg 255 (526)
T 3vsf_A 193 TDGKGYFISAANEN---MDLHLYELTPDY-----KNIASL---KAKLFV----GQQREAPCL-IK-RNGYYYLITSGCTG 255 (526)
T ss_dssp TTSCEEEEEEETTT---TEEEEEEECTTS-----SSEEEE---EEEEST----TSCCEEEEE-EE-SSSCEEEEEECCCT
T ss_pred CCCCEEEEEEecCC---CceEEEEcCCCc-----ccccCc---eEEeCC----CCCcCCeEE-EE-ECCEEEEEEcCCCC
Confidence 89999999986421 233344 33332 333331 221111 134578995 56 58999999975332
Q ss_pred C-cceEEEEEeCCCC-CcEEcccccccCCCCCceeeCcEEEec
Q 014058 216 N-EGMAFVYWSWDFI-HWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 216 ~-~G~i~ly~S~Dl~-~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
. .-.+.+++|+++. -|+..+.+. ......-....+|+++
T Consensus 256 ~~~~~~~~a~S~s~~GPw~~~~~~~--~~~~~~~q~~~v~~~~ 296 (526)
T 3vsf_A 256 WNPNQAKYAYSKDLASGWSQLYNLG--NSTTYRSQPTFIIPVQ 296 (526)
T ss_dssp TSCCCEEECEESCSSSCCCCCEEES--STTTTTCEEEEEEEEE
T ss_pred cCCCceEEEEeCCCCCCceeCCccC--CCCccCCCCeeEEEec
Confidence 1 1256788999876 688765443 2223344566677776
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00035 Score=73.41 Aligned_cols=149 Identities=12% Similarity=0.094 Sum_probs=91.6
Q ss_pred CCccCCCcceEECCEEEEEEEECCC-CCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPL-GPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~-~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
+-+.-|. ++|++|+|||||..... +..+. ....+.|+|+|.. .|++ +..+. . ....++++.++||+.+
T Consensus 70 ~~~WAP~-i~~~~g~~yly~t~~~~~~g~~~-~~~~~va~s~~p~Gpw~~-p~~~~-~------~~iDp~~f~DddG~~Y 139 (538)
T 3c2u_A 70 GGIWAPD-LSYADGKFWLIYTDVKVVDGMWK-DCHNYLTTAEDIKGPWSK-PILLN-G------AGFDASLFHDPSGKKY 139 (538)
T ss_dssp CEECSCE-EEEETTEEEEEEEEECCCSSSCC-CEEEEEEEESSTTCCCCC-CEEEE-C------SCSCCEEEECTTSCEE
T ss_pred CCEECCe-EEEECCEEEEEEEeccCCCCCcc-cccEEEEEECCCCCCccc-cEecC-C------CcCCCeeEECCCCCEE
Confidence 4456777 78899999999985432 22233 4678999999987 4987 33331 1 2356888887799999
Q ss_pred EEEeeccC--C--CceeEEEEE-ecCCCCCccceeeeecCCc-EEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC
Q 014058 143 ILYTGIDA--S--GQQVQNLAM-PENLSDPLLKDWVKFSGNP-VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (431)
Q Consensus 143 l~YTg~~~--~--~~~~q~lA~-S~D~~d~~l~~w~k~~~~P-vi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~ 216 (431)
|+|..... . ....+.++. +.|. ++ ..+.+ .|..+.+ .....-|++ ++ .+|+|||++++....
T Consensus 140 l~~~~~~~~~~~~~~~~i~~~~l~~d~-------~~-~~g~~~~i~~~~~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~ 207 (538)
T 3c2u_A 140 LVNMYWDQRVYHHNFYGIALQEYSVAE-------EK-LIGKPEIIYKGTD--IAYTEGPHL-YY-INDMYYLMTAEGGTT 207 (538)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-------TE-ECSCCEEEECCCT--TCCCEEEEE-EE-ETTEEEEEEEESCSS
T ss_pred EEEEecCCccCCCCCCCEEEEEECCcc-------CC-CCCCCEEEecCCC--CCccccceE-EE-ECCEEEEEEecCCCC
Confidence 99975321 1 123344553 3332 11 11222 2222211 235678985 45 489999999765322
Q ss_pred cc-eEEEEEeCCCC-CcEEcc
Q 014058 217 EG-MAFVYWSWDFI-HWTKLD 235 (431)
Q Consensus 217 ~G-~i~ly~S~Dl~-~W~~~~ 235 (431)
.+ ++.+++|+++. -|+...
T Consensus 208 ~~~~~~~~rS~s~~GP~~~~~ 228 (538)
T 3c2u_A 208 YQHSETIARSKTIHGPYEIQP 228 (538)
T ss_dssp TTCEEEEEEESSTTCCCEECT
T ss_pred CCeEEEEEEECCCCCCCccCC
Confidence 22 57889999986 788754
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00067 Score=71.13 Aligned_cols=155 Identities=12% Similarity=0.101 Sum_probs=94.1
Q ss_pred CCCccCCCcceEECCEEEEEEEECC-CCCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNP-LGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P-~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
.+-+.-|. ++|++|+|||||.... .+..|. ....+.|+|+|.. .|++ +..+ .. ..+.++++.++||+.
T Consensus 69 ~~~~WAP~-i~~~~g~~yl~yt~~~~~~g~~~-~~~~~va~s~~p~Gpw~~-p~~~-~~------~~iDp~~f~D~dG~~ 138 (533)
T 1yif_A 69 SGGVWAPC-LSYSDGKFWLIYTDVKVVDGAWK-DCHNYLVTCETINGDWSE-PIKL-NS------SGFDASLFHDTDGKK 138 (533)
T ss_dssp TCBBCSCE-EEEETTEEEEEEEEECCCSSSCC-CEEEEEEEESSTTSCCCC-CEEC-CC------SCSCCEEEECTTSCE
T ss_pred CCCEECce-EEEECCEEEEEEEeccCCCCCcc-cccEEEEEeCCCCCCccc-cEEc-CC------CcCCCceEECCCCCE
Confidence 34466787 7889999999998532 222333 4678999999986 6987 3333 21 235688888889999
Q ss_pred EEEEeeccC-CC---ceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC
Q 014058 142 FILYTGIDA-SG---QQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (431)
Q Consensus 142 ~l~YTg~~~-~~---~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~ 216 (431)
+|+|.+... .+ ...+.++. +.|. .+... +...++... ......-|++ ++ .+|+|||++.+....
T Consensus 139 Yl~~~~~~~~~g~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~~~---~~~~~EgP~i-~k-~~G~YYL~~s~gg~~ 207 (533)
T 1yif_A 139 YLLNMLWDHRIDRHSFGGIVIQEYSDKE-----QKLIG-KPKVIFEGT---DRKLTEAPHL-YH-IGNYYYLLTAEGGTR 207 (533)
T ss_dssp EEEEEEECCCTTSCSEEEEEEEEEETTT-----TEECS-CCEEEECCC---TTCCCEEEEE-EE-ETTEEEEEEEESCSS
T ss_pred EEEEEecccccCCCCCCCEEEEEECCcc-----CCCCC-CcEEEEcCC---CCCccccceE-EE-ECCEEEEEEeCCCCC
Confidence 999975321 11 23344443 4443 11111 112233221 1234567885 45 489999999764322
Q ss_pred c-ceEEEEEeCCCC-CcEEcc-cccc
Q 014058 217 E-GMAFVYWSWDFI-HWTKLD-HPLY 239 (431)
Q Consensus 217 ~-G~i~ly~S~Dl~-~W~~~~-~~l~ 239 (431)
. -.+.+++|+++. -|+... .++.
T Consensus 208 ~~~~v~~~rs~s~~GP~~~~~~~pil 233 (533)
T 1yif_A 208 YEHAATIARSANIEGPYEVHPDNPIL 233 (533)
T ss_dssp TTCEEEEEEESSTTCCCEECTTCCSE
T ss_pred CCeEEEEEEECCCCceeeeCCCCceE
Confidence 2 257889999875 688753 3443
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00028 Score=73.93 Aligned_cols=150 Identities=15% Similarity=0.081 Sum_probs=91.2
Q ss_pred CCccCCCcceEECCEEEEEEEECCC-CCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPL-GPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~-~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
+-+..|. ++|++|+|||||..... +..+. ..+.+.|+|+|.. .|++ +..+ . .....++++.++||+.+
T Consensus 72 ~~~wAP~-i~~~~g~~yl~yt~~~~~~g~~~-~~~~~va~s~~p~Gpw~~-p~~~-~------~~~iDp~vf~D~dG~~Y 141 (528)
T 1yrz_A 72 GGIWAPC-LSYHDGTFYLIYTDVKQWHGAFK-DAHNYLVTAQNIEGPWSD-PIYL-N------SSGFDPSLFHDDDGRKW 141 (528)
T ss_dssp CEECSCE-EEEETTEEEEEEEEEEECSSSCC-EEEEEEEEESSSSSCCCC-CEEC-C------CSCSCCEEEECTTSCEE
T ss_pred CCEECCe-EEEECCEEEEEEecccCCCCCcc-cceEEEEEeCCCCCCccc-cEEC-C------CCcCCCceEECCCCCEE
Confidence 4456777 78899999999985321 12233 4568899999987 5986 3223 1 23467888887899999
Q ss_pred EEEeeccC-C---CceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC-
Q 014058 143 ILYTGIDA-S---GQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN- 216 (431)
Q Consensus 143 l~YTg~~~-~---~~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~- 216 (431)
|+|..... . ....+.++. +.|. .+.... ...++... ....+.-|++ ++ .+|+|||++.+....
T Consensus 142 l~~~~~~~~~~~~~~~~i~~~~l~~d~-----~~~~g~-~~~i~~~~---~~~~~EgP~i-~k-~~G~YYL~~s~~g~~~ 210 (528)
T 1yrz_A 142 LVNMIWDYRKGNHPFAGIILQEYSEAE-----QKLVGP-VKNIYKGT---DIQLTEGPHL-YK-KDGYYYLLVAEGGTEY 210 (528)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-----TEEEEE-EEEEECCC---TTCCCEEEEE-EE-ETTEEEEEEEESCSST
T ss_pred EEEeeccCCCCCCCCCeEEEEEECCcc-----CCCCCC-CEEEEcCC---CCCccCCCEE-EE-ECCEEEEEEeCCCCCC
Confidence 99653221 1 123445554 3332 122211 12233221 1235678985 55 489999999765322
Q ss_pred cceEEEEEeCCCC-CcEEcc
Q 014058 217 EGMAFVYWSWDFI-HWTKLD 235 (431)
Q Consensus 217 ~G~i~ly~S~Dl~-~W~~~~ 235 (431)
.-.+.+++|+++. .|+...
T Consensus 211 ~~~~~~~rs~~~~GP~~~~~ 230 (528)
T 1yrz_A 211 EHAATLARSQSIDGPYETDP 230 (528)
T ss_dssp TCEEEEEEESSTTCCCEECT
T ss_pred CcEEEEEEECCCCCCCCcCC
Confidence 2257789999986 798763
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.84 E-value=3.7e-05 Score=78.80 Aligned_cols=159 Identities=12% Similarity=0.140 Sum_probs=98.9
Q ss_pred CCCcceE--ECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEEEEE
Q 014058 69 DPNGPMY--YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (431)
Q Consensus 69 DPnG~i~--~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~Y 145 (431)
.|. ++| ++|+|||||..+..+ .+ ....+.|+|++.. .|+++++.+..+.+. ..+.+++++++||+.+|+|
T Consensus 87 AP~-V~y~~~dGkYYLyyt~~~~~--~~-~~~igVAtSdsP~GPwt~~gpl~~~g~~~---~~IDPsvF~DdDGk~YL~~ 159 (441)
T 3nqh_A 87 RVK-VMKCPSTGEYVMYMHADDMN--YK-DPHIGYATCSTIAGEYKLHGPLLYEGKPI---RRWDMGTYQDTDGTGYLLL 159 (441)
T ss_dssp EEE-EEECTTTCCEEEEEEEEETT--SC-SCEEEEEEESSTTSCCEEEEECEETTEEC---CCCSEEEEECTTSCEEEEE
T ss_pred Cce-eEEEccCCEEEEEEEeCCCC--CC-cceEEEEEeCCCCCCceEcceeecCCCcc---cccCceEEEeCCCCEEEEe
Confidence 444 566 499999999876432 23 5689999999965 799876655333221 3467889998899999999
Q ss_pred eeccCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-CcceEEEE
Q 014058 146 TGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMAFVY 223 (431)
Q Consensus 146 Tg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-~~G~i~ly 223 (431)
.+. .++ .+.|. .++... ++...+. .....|++ ++ .+|.|||+++.... ....+.++
T Consensus 160 g~~--------~I~eLs~D~-----~~~~g~---~~~i~~g----~~~EgP~i-~K-~~G~YYL~~S~~~g~~~~~~~~a 217 (441)
T 3nqh_A 160 HGG--------IVYRLSKDY-----RTAEEK---VVSGVGG----SHGESPAM-FK-KDGTYFFLFSNLTSWEKNDNFYF 217 (441)
T ss_dssp GGG--------EEEEECTTS-----SSEEEE---EESCSTT----CCCEEEEE-EE-ETTEEEEEEECSCTTSCCCCEEE
T ss_pred CCC--------cEEEeCCcc-----ccccCc---eEEeCCC----CceECcEE-EE-ECCEEEEEEeCCCCcCCCceEEE
Confidence 642 123 34443 455431 2211111 24578985 55 58999999986421 11235688
Q ss_pred EeCCCC-CcEEcccccccCCCCCceeeCcEEEec
Q 014058 224 WSWDFI-HWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 224 ~S~Dl~-~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
+|+++. -|+..+.++........=-+..+|++.
T Consensus 218 rS~s~~GPw~~~g~i~~~~~~t~~sQ~t~vl~v~ 251 (441)
T 3nqh_A 218 TAPSVKGPWTRQGLFAPEGSLTYNSQTTFVFPLK 251 (441)
T ss_dssp EESSTTCCCEEEEESSCTTSHHHHCEEEEEEEEE
T ss_pred EeCCCCCCceECCccCCCCCccCcCCCceEEEeC
Confidence 999886 799877655322211223455666775
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00012 Score=77.09 Aligned_cols=137 Identities=15% Similarity=0.230 Sum_probs=89.5
Q ss_pred eCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcE
Q 014058 104 SYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPV 180 (431)
Q Consensus 104 S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pv 180 (431)
|.++++|.+..-.+.|...+ +-.+..++..+|+++|||.-+... +...-++|+|+|. +||+..+ ++
T Consensus 11 ~~~~~~~~Rp~yH~~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DL-----vhW~~~p--~A 79 (546)
T 3ugf_A 11 SNAQLSWQRTAFHFQPERSW----MSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDL-----IHWLYLP--LA 79 (546)
T ss_dssp CHHHHHHTSCSSSCCCSSEE----EEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSS-----SSCEECC--CC
T ss_pred chhhhhhcCCeEEEeCCCCC----ccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCc-----CccccCC--CC
Confidence 55788898877777776433 123443444699999999865322 3456789999995 8999863 56
Q ss_pred EcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-CcceEEEEEeCCC-----CCcEEcc-cccccCCC---CCceeeC
Q 014058 181 MTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMAFVYWSWDF-----IHWTKLD-HPLYSVQE---TGMWECP 250 (431)
Q Consensus 181 i~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~~---~~~wECP 250 (431)
|.+...++....-.+.++.. .+|+++|++.+..+ ......++.|+|+ .+|+... .|+..... ...+.-|
T Consensus 80 L~P~~~~D~~G~~SGSavv~-~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRDP 158 (546)
T 3ugf_A 80 LAADQWYDMQGVFSGSATCL-PDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDA 158 (546)
T ss_dssp BCSCSGGGTTCEEEEEEEEC-TTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCCB
T ss_pred CCCCcccccCCcCcceEEEe-eCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeecc
Confidence 65544344455567775433 68999999987643 2334568889885 8999864 35443221 2357778
Q ss_pred cE
Q 014058 251 DI 252 (431)
Q Consensus 251 dl 252 (431)
.+
T Consensus 159 kV 160 (546)
T 3ugf_A 159 ST 160 (546)
T ss_dssp CC
T ss_pred ce
Confidence 73
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00026 Score=73.21 Aligned_cols=144 Identities=14% Similarity=0.222 Sum_probs=89.9
Q ss_pred ECCEEEEEEEECCCCCC-CCC-----cceEE------EEEeC--CCccceecccccCCCCc-cC------CCCeEeecEE
Q 014058 76 YKGVYHLFYQYNPLGPL-FGD-----KMIWA------HSVSY--DLINWIHLSHALCPSGP-YD------INSCWSGSVT 134 (431)
Q Consensus 76 ~~G~YHlFyq~~P~~~~-wg~-----~~~Wg------Ha~S~--Dlv~W~~~~~aL~P~~~-~D------~~gv~SGsav 134 (431)
.+|+|||||...-.... -|. ...+. |+.++ +|.+|+++++.+.+++. |+ ....-.+.++
T Consensus 173 ~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~~~l~~~DG~~Yqt~~q~~~~~fRDP~vf 252 (493)
T 1w18_A 173 HGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAHTPLLQPDGVLYQNGAQNEFFNFRDPFTF 252 (493)
T ss_dssp TSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEEE
T ss_pred CCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccCCceeecCccccccccccCCccccCCEEE
Confidence 58999999987532111 110 13455 33333 36789988888888753 22 2345567787
Q ss_pred Ecc--CCeEEEEEeeccCCC----------------------------------ceeEEEEEecCCCCCccceeeeecCC
Q 014058 135 ILP--GDKPFILYTGIDASG----------------------------------QQVQNLAMPENLSDPLLKDWVKFSGN 178 (431)
Q Consensus 135 ~~~--dg~~~l~YTg~~~~~----------------------------------~~~q~lA~S~D~~d~~l~~w~k~~~~ 178 (431)
.++ ||+.+|+|.++.... ...++||..++. .+..|+-. .
T Consensus 253 ~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~---Dl~~We~~--~ 327 (493)
T 1w18_A 253 EDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIATDS---TLSKWKFL--S 327 (493)
T ss_dssp ECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESST---TSCCEEEE--E
T ss_pred ecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEeCCC---CCccceec--C
Confidence 775 389999998865321 235667887653 25789854 4
Q ss_pred cEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-----CC---cceEEEEEeCCCC
Q 014058 179 PVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DN---EGMAFVYWSWDFI 229 (431)
Q Consensus 179 Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-----~~---~G~i~ly~S~Dl~ 229 (431)
|++..+. -...+.-|.|+.. +|+|||+...+. .. .| +..|.|+.+.
T Consensus 328 PL~~a~~--v~deiErP~V~~~--~GkyYLFtSs~~~t~a~~~~G~~g-~yg~VSdsl~ 381 (493)
T 1w18_A 328 PLISANC--VNDQTERPQVYLH--NGKYYIFTISHRTTFAAGVDGPDG-VYGFVGDGIR 381 (493)
T ss_dssp EEEECTT--TBSCCEEEEEEEE--TTEEEEEEEECGGGBCTTCCCCSE-EEEEEESSSE
T ss_pred ccccCCC--CCCcEECCeEEEE--CCEEEEEEEccCccccCCccCCcc-eEEEEeCCCC
Confidence 7876543 2356778996544 899999988663 11 23 3456677764
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00011 Score=76.33 Aligned_cols=149 Identities=13% Similarity=0.126 Sum_probs=91.1
Q ss_pred ccCCCcceEE--C--CEEEEEEEECCCCCCCCCcceEEEEEeCCCcc-ceec-c-cccCCCCc-cC-CCCeEeecEEEcc
Q 014058 67 INDPNGPMYY--K--GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN-WIHL-S-HALCPSGP-YD-INSCWSGSVTILP 137 (431)
Q Consensus 67 ~NDPnG~i~~--~--G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~-W~~~-~-~aL~P~~~-~D-~~gv~SGsav~~~ 137 (431)
+..|. ++++ + |+|||||... ....+.|+|+|... |++. + +.+.++.+ .+ ......+++++++
T Consensus 100 ~WAP~-v~~~~~~g~g~yylyyt~~--------~~~i~va~s~~p~Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~Dd 170 (487)
T 3c7f_A 100 SWAPS-IAVKKINGKDKFFLYFANS--------GGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDD 170 (487)
T ss_dssp CEEEE-EEEEEETTEEEEEEEEEST--------TBCEEEEEESSTTCCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEECT
T ss_pred Ccchh-eEEEecCCCCeEEEEEEcC--------CcEEEEEEeCCCCCCcccCCCCeEeecCCCCccCCCCccCCceEEcC
Confidence 34565 6665 4 7999999642 24589999999985 9975 3 23332211 11 1235789999888
Q ss_pred CCeEEEEEeeccCC----------CceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeE
Q 014058 138 GDKPFILYTGIDAS----------GQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRW 206 (431)
Q Consensus 138 dg~~~l~YTg~~~~----------~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~ 206 (431)
||+.+|+|.+.... ..+...+| .+.|. .+|.... ..+..| ..+..|.+ ++ .+|+|
T Consensus 171 dG~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~-----~~~~g~~--~~i~~p-----~~~Egp~i-~k-~~G~Y 236 (487)
T 3c7f_A 171 DGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDM-----TSVVGSA--STIDAP-----FMFEDSGL-HK-YNGTY 236 (487)
T ss_dssp TSCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTS-----SSEEEEE--EEECCT-----TEEEEEEE-EE-ETTEE
T ss_pred CCCEEEEECCcccCccccccccccCCCceEEEEECCCe-----eeccCcc--EEecCC-----ceEecceE-EE-ECCEE
Confidence 99999999763211 11234444 44443 5676421 122222 23567884 45 48999
Q ss_pred EEEEeeee--C-----CcceEEEEEeCCCC-CcEEccccc
Q 014058 207 RVLVGGQI--D-----NEGMAFVYWSWDFI-HWTKLDHPL 238 (431)
Q Consensus 207 ~M~~ga~~--~-----~~G~i~ly~S~Dl~-~W~~~~~~l 238 (431)
||++.+.. . ....+.+++|+++. -|++.+.++
T Consensus 237 Yl~ys~~~~~t~~~~~~~~~i~~~~S~s~~GP~~~~~~il 276 (487)
T 3c7f_A 237 YYSYCINFGGTHPADKPPGEIGYMTSSSPMGPFTYRGHFL 276 (487)
T ss_dssp EEEEEECSSSCCCTTSCTTSEEEEEESSTTCCCEEEEEEE
T ss_pred EEEEECCCCCCcccCCCCceeEEEEcCCCCCCceECceec
Confidence 99887642 1 12367889999886 698875444
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00031 Score=72.76 Aligned_cols=159 Identities=11% Similarity=0.068 Sum_probs=94.8
Q ss_pred CccCCCcceE-ECCEEEEEEEECCCCCCCCCcceEEEEEeCCCc-cceecccccCCC--------CccC---CCCeEeec
Q 014058 66 WINDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPS--------GPYD---INSCWSGS 132 (431)
Q Consensus 66 w~NDPnG~i~-~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~--------~~~D---~~gv~SGs 132 (431)
-+..|. +++ .+|+|||||..+..+. + ....++|+|+|.. .|++.+..|... ..++ ......++
T Consensus 98 ~~WAP~-vi~~~dGkyylyys~~~~~~--~-~~~IgvatSddp~GPw~~~g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~ 173 (470)
T 2x8s_A 98 TLWAAD-VTQLADGKYYMYYNACRGDS--P-RSAMGVAVADNIEGPYKNKGIFLKSGMEGTSSDGTPYDATKHPNVVAPH 173 (470)
T ss_dssp SCCCCE-EEECTTSCEEEEEEEECSSS--C-CEEEEEEEESSTTCCCEEEEEEEEECCSSBCTTSSBCCTTTSCCSCCCE
T ss_pred ceECCe-EEEecCCEEEEEEEeccCCC--C-ccEEEEEEeCCCCCCceeCCeeeccCcccccccccccccccCCCCCCCC
Confidence 455676 566 4899999998764321 2 5679999999998 699986555331 1122 23467889
Q ss_pred EEEccCCeEEEEEeeccCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEe
Q 014058 133 VTILPGDKPFILYTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (431)
Q Consensus 133 av~~~dg~~~l~YTg~~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~g 211 (431)
+++++||+.+|+|.+... .+.++- +.|.+.+ ..+... ...+... ......-|+++++..+|.|||+++
T Consensus 174 vf~DdDG~~Yl~~g~~~~----gI~~~eL~~d~~~~--~~~~~~-~~~i~~g----~~~~~EGP~i~~~K~~G~YYL~~S 242 (470)
T 2x8s_A 174 TFFDKDGKLWMVYGSYSG----GIFILEMNPKTGFP--LPGQGY-GKKLLGG----NHSRIEGPYVLYNPDTQYYYLYLS 242 (470)
T ss_dssp EEECTTSCEEEEECBSTT----CEEEEEBCTTTSSB--CTTCTT-CEEEECC----SSCSEEEEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCEEEEeeecCC----cEEEEEECCccCcC--cCCccc-ceEecCC----CCCceeccEEEEEccCCEEEEEEE
Confidence 988889999999986431 133333 2222111 111100 1122211 112456788644346899999987
Q ss_pred eee-C--CcceEEEEEeCCCC-CcEE-cccccc
Q 014058 212 GQI-D--NEGMAFVYWSWDFI-HWTK-LDHPLY 239 (431)
Q Consensus 212 a~~-~--~~G~i~ly~S~Dl~-~W~~-~~~~l~ 239 (431)
+.. . ..-++.+++|+++. -|+. .+.++.
T Consensus 243 ~g~~~~~~~y~v~~arS~s~~GP~~~~~g~pl~ 275 (470)
T 2x8s_A 243 YGGLDATGGYNIRVARSKKPDGPYYDAEGNPML 275 (470)
T ss_dssp ESBSSTTSBCEEEEEEESSTTCCCBCTTCCBGG
T ss_pred eCCCCCCCCceEEEEEECCCCCCCCcCCCCccc
Confidence 643 1 12257789999875 6873 345554
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0016 Score=68.40 Aligned_cols=151 Identities=12% Similarity=0.064 Sum_probs=91.2
Q ss_pred CCCccCCCcceEECCEEEEEEEECCC-CCCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPL-GPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~-~~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
.+-+.-|. ++|++|+|+|||..... ...+. ....+.|+|+|.. .|++ +..+ . .....++++.++||+.
T Consensus 70 ~~~~WAP~-i~~~~g~~ylyyt~~~~~~g~~~-~~~~~va~s~~~~Gpw~~-p~~~-~------~~~iDp~vf~DddG~~ 139 (535)
T 2exh_A 70 SGGVWAPH-LSYSDGKFWLIYTDVKVVEGQWK-DGHNYLVTCDTIDGAWSD-PIYL-N------SSGFDPSLFHDEDGRK 139 (535)
T ss_dssp TCBBCSCE-EEEETTEEEEEEEEECCCSSSCC-CEEEEEEEESSTTSCCCC-CEEC-C------CSCSCCEEEECTTSCE
T ss_pred CCCEECCe-EEEECCEEEEEEEeccCCCCCcc-ccceEEEEeCCCCCCccc-cEec-C------CCcCCCceEECCCCCE
Confidence 34466787 78899999999985432 12233 4678999999986 6987 3323 1 1235688888779999
Q ss_pred EEEEeeccC-CC---ceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCC
Q 014058 142 FILYTGIDA-SG---QQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (431)
Q Consensus 142 ~l~YTg~~~-~~---~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~ 216 (431)
+|+|..... .. ...+.++- +.|. .+... +...++... + .....-|++ ++ .+|+|||++++....
T Consensus 140 Yl~~~~~~~~~~~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~~~-~--~~~~EgP~i-~k-~~G~YYL~~s~ggt~ 208 (535)
T 2exh_A 140 YLVNMYWDHRVDHHPFYGIVLQEYSVEQ-----KKLVG-EPKIIFKGT-D--LRITEGPHL-YK-INGYYYLLTAEGGTR 208 (535)
T ss_dssp EEEEEEECCCTTSCSEEEEEEEEEETTT-----TEEEE-EEEEEECCC-T--TCCCEEEEE-EE-ETTEEEEEEEESCSS
T ss_pred EEEEEecCCccCCCCCCcEEEEEECCcc-----CCCCC-CcEEEEcCC-C--CCccccceE-EE-ECCEEEEEEeCCCCC
Confidence 999875321 11 23334443 3332 11111 112233221 1 234678885 45 489999999764322
Q ss_pred cc-eEEEEEeCCCC-CcEEcc
Q 014058 217 EG-MAFVYWSWDFI-HWTKLD 235 (431)
Q Consensus 217 ~G-~i~ly~S~Dl~-~W~~~~ 235 (431)
.+ .+.+++|+++. -|+...
T Consensus 209 ~~~~~~~~rs~s~~GP~~~~~ 229 (535)
T 2exh_A 209 YNHAATIARSTSLYGPYEVHP 229 (535)
T ss_dssp TTCEEEEEEESSTTCCCEECT
T ss_pred CCeEEEEEEeCCCCCCCccCC
Confidence 22 57789999885 687753
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0068 Score=59.18 Aligned_cols=156 Identities=14% Similarity=0.187 Sum_probs=79.6
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCC-cceEEEEE-eC--CC--ccceecccccCCCCccCCCCeEeecEEEccCCeE
Q 014058 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGD-KMIWAHSV-SY--DL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 68 NDPnG~i~~~G~YHlFyq~~P~~~~wg~-~~~WgHa~-S~--Dl--v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
.-|. ++|++|+|+|||.....+..... ..+-.+++ ++ |- -.|++.+....+. ......++++.+ ||+.
T Consensus 75 WAP~-v~~~~G~yylyys~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~~~~~~~~----~~~~IDp~vf~D-dd~~ 148 (330)
T 3k1u_A 75 WAPE-IHFINGAWYIYFAAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEKGRIKTAW----ESFSLDATIFEH-NEKL 148 (330)
T ss_dssp EEEE-EEEETTEEEEEEEEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEEEECCCSS----CSCEEEEEEEEE-TTEE
T ss_pred ECCE-EEEECCeEEEEEEeccCCCCCCcccceeeeEEEeCCCCCccccccccccccCCC----CCCccCceEEEE-CCcc
Confidence 3455 78899999999987765432210 11222333 22 22 2466654332221 134578888876 5555
Q ss_pred EEEEeeccC--CCceeEEEEEecCCCCCccceeeeecCCcEE--cCCCCCCC---CCccCCeEEEecCCCeEEEEEeeee
Q 014058 142 FILYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM--TPPNGVKD---DMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 142 ~l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi--~~p~~~~~---~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
+++|.+... ...+.+.++-.++. . + ..+.++. .+...++. ....-|++ ++ .+|.|||++++..
T Consensus 149 ~~~~~~~~~~~~~~~~i~i~~l~~~-----~--~-~~g~~~~i~~~~~~~e~~~~~~~EGp~i-~k-~~G~YYL~ys~~~ 218 (330)
T 3k1u_A 149 YYVWAQQDINIKGHSNIYIAEMENP-----W--T-LKTKPVMLTKPELEWEIKGFWVNEGPAV-LK-KNGKIFITYSASA 218 (330)
T ss_dssp EEEEEECCTTSSSSBEEEEEEEEET-----T--E-ECSCCEEEECSCSGGGCSSSCBEEEEEE-EE-ETTEEEEEEEESC
T ss_pred EEEEeecCCCcCCCceEEEEECCCC-----c--c-ccCCcEEecCCCccccccCCceeeCCEE-EE-ECCEEEEEEEeCC
Confidence 555554332 23344445543332 1 1 1123332 22111111 22367885 45 4899999997654
Q ss_pred CC-cceEEEEEeCCCC------CcEEcccccc
Q 014058 215 DN-EGMAFVYWSWDFI------HWTKLDHPLY 239 (431)
Q Consensus 215 ~~-~G~i~ly~S~Dl~------~W~~~~~~l~ 239 (431)
.. .=++.+++|+... .|+..+.++.
T Consensus 219 ~~~~y~~~~~~s~~~~gP~~~~~~~~~~~pi~ 250 (330)
T 3k1u_A 219 TDVNYCIGMLTAEENSNLLDKNSWTKSQTPVF 250 (330)
T ss_dssp SSTTCEEEEEEEETTSCTTSGGGCEECSSCSB
T ss_pred CCCCceEEEEEECCCCCCCCCccccccCCCEE
Confidence 22 2256677776542 3776555443
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0018 Score=68.29 Aligned_cols=115 Identities=16% Similarity=0.282 Sum_probs=73.8
Q ss_pred eecEEEccCCeEEEEEeeccCC---Cc-eeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCe
Q 014058 130 SGSVTILPGDKPFILYTGIDAS---GQ-QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~---~~-~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~ 205 (431)
.+..++..+|+++|||..+... +. ..-++|+|+|. ++|+.. .|+|.+...++....-.+.++.. .+|+
T Consensus 22 DPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dl-----v~W~~~--~~aL~P~~~~D~~Gv~SGsav~~-~dg~ 93 (543)
T 1st8_A 22 DPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDL-----VNWIHL--DPAIYPTQEADSKSCWSGSATIL-PGNI 93 (543)
T ss_dssp EEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSS-----SSEEEC--CCSBCCCSGGGTTEEEEEEEEEE-TTTE
T ss_pred CCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCc-----cceEEC--CeeccCCCccccCCEEcceEEEe-eCCE
Confidence 4444444699999999876432 23 56789999985 899975 46665543333344456665443 5899
Q ss_pred EEEEEeeee-CCcceEEEEEeCCC-----CCcEEcc-cccccCCCC---CceeeCcE
Q 014058 206 WRVLVGGQI-DNEGMAFVYWSWDF-----IHWTKLD-HPLYSVQET---GMWECPDI 252 (431)
Q Consensus 206 ~~M~~ga~~-~~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~~~---~~wECPdl 252 (431)
++|++.+.. +......++.|+|. .+|+... .|+.....+ ..+.-|..
T Consensus 94 ~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~v 150 (543)
T 1st8_A 94 PAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPST 150 (543)
T ss_dssp EEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCC
T ss_pred EEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeE
Confidence 999997733 33345668888775 8899853 344432222 35778873
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0034 Score=64.38 Aligned_cols=146 Identities=12% Similarity=0.193 Sum_probs=91.1
Q ss_pred ceE-ECCEEEEEEEECCCCCCCCCcceEEEEE-----eCC---CccceecccccCCCCc-c---------------CCCC
Q 014058 73 PMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSV-----SYD---LINWIHLSHALCPSGP-Y---------------DINS 127 (431)
Q Consensus 73 ~i~-~~G~YHlFyq~~P~~~~wg~~~~WgHa~-----S~D---lv~W~~~~~aL~P~~~-~---------------D~~g 127 (431)
.+. .+|++||||..+-... -. ...+.+|+ |+| +..|+++.+.+.+++. | +...
T Consensus 141 Ai~~~dG~i~LfYTg~~~~~-~~-~q~I~~a~~~l~~~~dgv~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~ 218 (447)
T 1oyg_A 141 ATFTSDGKIRLFYTDFSGKH-YG-KQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHT 218 (447)
T ss_dssp EEECTTSCEEEEEEEEEGGG-TT-EEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCC
T ss_pred eEECcCCEEEEEEEeecCCC-CC-ceEEEEEecceeecCCCcceecccCCCceEcCCCccccccccccccccccCCCccc
Confidence 344 5999999999753321 11 35678777 578 4567767777877642 1 1223
Q ss_pred eEeecEEEccCCeEEEEEeeccCCC-----------------------------------------ceeEEEEE-ecCCC
Q 014058 128 CWSGSVTILPGDKPFILYTGIDASG-----------------------------------------QQVQNLAM-PENLS 165 (431)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~lA~-S~D~~ 165 (431)
.-.+-++.+ +|+++|++.++.... .-.++|+. |.|
T Consensus 219 fRDP~Vf~d-~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D-- 295 (447)
T 1oyg_A 219 LRDPHYVED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD-- 295 (447)
T ss_dssp CEEEEEEEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT--
T ss_pred cCCCeEEeE-CCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC--
Confidence 445666654 899999998865421 13455663 554
Q ss_pred CCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-C-------cce-EEEEEeCCCC-CcE
Q 014058 166 DPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-N-------EGM-AFVYWSWDFI-HWT 232 (431)
Q Consensus 166 d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-~-------~G~-i~ly~S~Dl~-~W~ 232 (431)
+..|+-. .|++.+.. . ...+.-|.++ + .+|+|||++..+.. . .++ ++.|.|+.+. .|+
T Consensus 296 ---l~~W~~~--~pL~~~~~-v-~d~~EcPdlf-k-~dGkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GPy~ 363 (447)
T 1oyg_A 296 ---YTLKKVM--KPLIASNT-V-TDEIERANVF-K-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363 (447)
T ss_dssp ---SSEEEEE--EEEEECTT-T-CSCCEEEEEE-E-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred ---CCCceEc--cccccCCC-C-CCceEcCcEE-E-ECCEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCCCe
Confidence 3789764 47775432 1 2457889954 4 58999999987641 1 123 4467899885 464
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0037 Score=65.86 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=75.1
Q ss_pred eecEEEccCCeEEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeE
Q 014058 130 SGSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRW 206 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~ 206 (431)
.+..++..+|+++|||..+... +...-++|+|+|. ++|++. .++|.+...++....-.+.++.. .+|++
T Consensus 23 DPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~--~~aL~P~~~~D~~G~~SGsav~~-~dg~~ 94 (541)
T 2ac1_A 23 DPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL-----INWDPH--PPAIFPSAPFDINGCWSGSATIL-PNGKP 94 (541)
T ss_dssp EEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSS-----SSBEEE--EEEECCCSGGGTTCEEEEEEEEC-TTSCE
T ss_pred CCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCc-----cceEEC--ceeecCCCccccCCEEcceEEEe-eCCEE
Confidence 4444444699999999876432 3456689999985 899986 36676544344445556775433 58899
Q ss_pred EEEEeeee-CCcceEEEEEeCCC-----CCcEEcc-cccccCC--C---CCceeeCc-EEE
Q 014058 207 RVLVGGQI-DNEGMAFVYWSWDF-----IHWTKLD-HPLYSVQ--E---TGMWECPD-IFP 254 (431)
Q Consensus 207 ~M~~ga~~-~~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~--~---~~~wECPd-lf~ 254 (431)
+|++.+.. +......++.|+|. .+|+... .|+.... . ...+.-|. ++.
T Consensus 95 ~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~ 155 (541)
T 2ac1_A 95 VILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWL 155 (541)
T ss_dssp EEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEE
T ss_pred EEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeE
Confidence 99997743 33345668888774 8999853 3444322 1 23567787 444
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0054 Score=64.21 Aligned_cols=121 Identities=11% Similarity=0.121 Sum_probs=76.4
Q ss_pred eecEEEccCCeEEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcEEc---CCCCCCCCCccCCeEEEecCC
Q 014058 130 SGSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT---PPNGVKDDMFRDPTTAWQAPD 203 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~---~p~~~~~~~~RDP~Vv~~~~~ 203 (431)
.++.++..+|+++|||.-+... +...-++|+|+|. +||+..+ ++|. .|. .+......+.++.. .+
T Consensus 22 DPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dl-----v~W~~~~--~al~~~g~P~-~d~~g~~SGsav~~-~~ 92 (518)
T 1y4w_A 22 DPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDL-----THWEEKP--VALLARGFGS-DVTEMYFSGSAVAD-VN 92 (518)
T ss_dssp EEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSS-----SSCEEEE--EEECCBTTTS-CCCBEEEEEEEEEC-TT
T ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC-----ccEEECC--ceEecCCCCC-CCCCceEeeeEEEc-CC
Confidence 3443444699999999865321 3456789999995 8999863 5551 221 23345667776544 34
Q ss_pred C----------eEEEEEeeeeCC-------------cceEEEEEeCC-CCCcEEc--ccccccCCC------CCceeeCc
Q 014058 204 G----------RWRVLVGGQIDN-------------EGMAFVYWSWD-FIHWTKL--DHPLYSVQE------TGMWECPD 251 (431)
Q Consensus 204 g----------~~~M~~ga~~~~-------------~G~i~ly~S~D-l~~W~~~--~~~l~~~~~------~~~wECPd 251 (431)
| +++|++.+.... .-...++.|+| +.+|+.. +.|+..... ...+.-|.
T Consensus 93 ~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g~~w~k~~~~~pvi~~~~~~y~~~~~~fRDP~ 172 (518)
T 1y4w_A 93 NTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPF 172 (518)
T ss_dssp CTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTTSSCEECTTTCCSBCSCCTTCGGGTTSEEEEE
T ss_pred CccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCCceEEEcCCCCCeEecCCcccccCCCCcCCCc
Confidence 3 899998765311 13566788888 8899986 245443221 24688999
Q ss_pred EEEeccCC
Q 014058 252 IFPVSING 259 (431)
Q Consensus 252 lf~l~~~g 259 (431)
+|+.+..|
T Consensus 173 V~~~~~~g 180 (518)
T 1y4w_A 173 VFWHDESQ 180 (518)
T ss_dssp EEEETTTT
T ss_pred EeEECCCC
Confidence 99875334
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0075 Score=62.75 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=73.2
Q ss_pred ecEEEccCCeEEEEEeeccCC--CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCC----
Q 014058 131 GSVTILPGDKPFILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG---- 204 (431)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g---- 204 (431)
+..++..+|+++|||.-+... ... -++|+|+|. ++|+..+ +.|.+.. ....-...++-. .++
T Consensus 16 PNG~~y~~G~YHlFYQ~~P~~~~~g~-WgHa~S~DL-----vhW~~~~--~aL~P~~---~~g~~SGSav~~-~~~~~g~ 83 (492)
T 4ffh_A 16 PQRPVTTHGAYQLYYLHSDQNNGPGG-WDHASTTDG-----VAFTHHG--TVMPLRP---DFPVWSGSAVVD-TANTAGF 83 (492)
T ss_dssp EEEEEEETTEEEEEEEEESSTTCCCE-EEEEEESSS-----SSCEEEE--EEECCBT---TBCCCCEEEEEE-TTCSSSS
T ss_pred CeeeEEECCEEEEEEECCCCCCCCCc-EEEEEeCCC-----CccEECC--CCCCCCC---CCCEEeceEEEe-CCCcccc
Confidence 333444699999999865321 123 789999995 8999863 5554332 235557775544 344
Q ss_pred ---eEEEEEeeeeC---CcceEEEEEeCC-CCCcEEcccccccCCCCCc------------eeeCcEEEec
Q 014058 205 ---RWRVLVGGQID---NEGMAFVYWSWD-FIHWTKLDHPLYSVQETGM------------WECPDIFPVS 256 (431)
Q Consensus 205 ---~~~M~~ga~~~---~~G~i~ly~S~D-l~~W~~~~~~l~~~~~~~~------------wECPdlf~l~ 256 (431)
.++|++.+... ..-...++.|+| +++|+..+.|+........ +.-|.+|+-+
T Consensus 84 ~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g~~w~k~~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V~~~~ 154 (492)
T 4ffh_A 84 GAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDT 154 (492)
T ss_dssp CTTEEEEEEEEEGGGCGGGEEEEEEEESSSSSSCEECSSCSBCCTTTTTCCSHHHHHHHTCEEEEEEEEET
T ss_pred CCCcEEEEEeecccCCCCcEEEEEEEeCCCCceEEEcCccccCCCCccccccccccccCCCCcCCEEEEEC
Confidence 49888876532 223556788988 6899987555543322222 7889999864
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0036 Score=65.70 Aligned_cols=118 Identities=10% Similarity=0.067 Sum_probs=73.8
Q ss_pred eecEEEccCCeEEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeE
Q 014058 130 SGSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRW 206 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~ 206 (431)
.+..++..+|+++|||..+... +...-++|+|+|. ++|+..+ ++|.+...++....-.+.++.. .+|++
T Consensus 54 DPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DL-----vhW~~~~--~aL~P~~~~d~~g~~SGSav~~-~dg~~ 125 (526)
T 3pij_A 54 DPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDM-----LNWKREP--IMFAPSLEQEKDGVFSGSAVID-DNGDL 125 (526)
T ss_dssp EEEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESSS-----SSEEECC--CCBCCCBGGGTTEEEEEEEEEC-TTSCE
T ss_pred CCeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCCC-----CCceeCe--eccCCCCccccCCeEeceEEEc-cCCEE
Confidence 3443444699999999865321 3456789999995 8999853 5554433334445556775533 57899
Q ss_pred EEEEeeeeC-----Cc----ceEEEEEeCCC--CCcEEcccccccCC--CCCceeeCcEEEe
Q 014058 207 RVLVGGQID-----NE----GMAFVYWSWDF--IHWTKLDHPLYSVQ--ETGMWECPDIFPV 255 (431)
Q Consensus 207 ~M~~ga~~~-----~~----G~i~ly~S~Dl--~~W~~~~~~l~~~~--~~~~wECPdlf~l 255 (431)
+|++.+... .. -...++.|+|+ ++|+..+.++..+. ....+.=|.+|+-
T Consensus 126 ~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~gl~~w~K~~pvi~~P~~~~~~~fRDP~V~~~ 187 (526)
T 3pij_A 126 RFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSATKQGMIIDCPTDKVDHHYRDPKVWKT 187 (526)
T ss_dssp EEEEEEEEETTSSSGGGCEEEEEEEEEESSTTCSCEEEEEEEECCCGGGEEEEEEEEEEEEE
T ss_pred EEEEecccCcccccCCCCceeEEEEEEECCCCcceEEECCccccCCCCccccccccCEEEEE
Confidence 988876531 11 24568889887 89998653232221 1234778888873
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.12 Score=51.24 Aligned_cols=187 Identities=13% Similarity=0.087 Sum_probs=102.1
Q ss_pred cceeeecCCCCccCCCc----ceE-ECCEEEEEEEECCCCCCCCCcceEEEEEeCCC-ccceecccccCCCCccCCCC-e
Q 014058 56 TSYHFRPPQNWINDPNG----PMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINS-C 128 (431)
Q Consensus 56 p~~H~~p~~gw~NDPnG----~i~-~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dl-v~W~~~~~aL~P~~~~D~~g-v 128 (431)
..-=|+|+.++ +|+.. ++. .+|+.-+++....... + ..+++..+|+|. .+|++......+... .+ +
T Consensus 8 ~~~if~~~~~~-~~~~~~yp~~v~L~dG~lLa~~~~~~~~~--~-~~~~~v~rS~DgG~TW~~~~~v~~~~~g---~~~~ 80 (355)
T 3a72_A 8 NVTIFSPPSDY-IVPRTLYPRNEQLPNGDLLATWENYSPEP--P-AVYFPIYRSKDHGKTWNEISRVHDTVNG---YGLR 80 (355)
T ss_dssp EEEEECCCTTS-CTTSEEEEEEEECTTSCEEEEEEECCCSS--S-CCCEEEEEESSTTSCCEEEEEECCTTTS---SCEE
T ss_pred eeeEecCCccc-CCCCCccceEEEcCCCCEEEEEEeecCCC--C-CceEEEEEEcCCCcCcCCCcccCCCcCC---cccc
Confidence 33456677764 56653 222 4888888776543221 2 456778899997 899997543322211 12 3
Q ss_pred EeecEEEcc-------CCeEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEc-CCCCC--CCCCccCCeE
Q 014058 129 WSGSVTILP-------GDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT-PPNGV--KDDMFRDPTT 197 (431)
Q Consensus 129 ~SGsav~~~-------dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~-~p~~~--~~~~~RDP~V 197 (431)
+.++++..+ +|++.+.+.....+ ....+.+..|+|+| ++|++.. .+.. ..+.. .....-.|++
T Consensus 81 ~~P~l~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G----~TW~~~~--~i~~~~~~~~~~g~~~v~eP~~ 154 (355)
T 3a72_A 81 YQPFLYSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDG----MTWDFVS--HIAAGGEARPNNGLTPVWEPFL 154 (355)
T ss_dssp EEEEEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTT----SCCEEEE--EEEEESCSSCCTTCCCEEEEEE
T ss_pred cCCcEEecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCC----ccCccCc--cccccCccccccCCCccccceE
Confidence 366665555 78877665443221 23456788999987 7999853 2222 11100 0011224553
Q ss_pred EEecCCCeEEEEEeeee-C-Ccc-eEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEecc
Q 014058 198 AWQAPDGRWRVLVGGQI-D-NEG-MAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI 257 (431)
Q Consensus 198 v~~~~~g~~~M~~ga~~-~-~~G-~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~ 257 (431)
+- .+|+.++++..+. + ..+ .+.+..|+|+++|+..............--.|.+.+|.+
T Consensus 155 ~~--~~G~l~~~~~~~~~~~~~~~~~~~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~d 215 (355)
T 3a72_A 155 LA--NKGKLICYYSDQRDNATYGQTMVHQVTNDLKNWGPVVEDVTYPTYTDRPGMPVVTKLPN 215 (355)
T ss_dssp EE--ETTEEEEEEEECCCTTTCSCEEEEEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECTT
T ss_pred Ec--cCCeEEEEECCCCCCCCCCcEEEEEECCCCCCCCCCeeccccCccCCCCCceEEEECCC
Confidence 32 3788877775443 1 123 455668999999965322111111111222478888874
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.015 Score=61.06 Aligned_cols=134 Identities=9% Similarity=0.094 Sum_probs=82.8
Q ss_pred ceE-ECCEEEEEEEECCCCCC-CCCcceEEEEE-------eCC---CccceecccccCCCCcc--------------CCC
Q 014058 73 PMY-YKGVYHLFYQYNPLGPL-FGDKMIWAHSV-------SYD---LINWIHLSHALCPSGPY--------------DIN 126 (431)
Q Consensus 73 ~i~-~~G~YHlFyq~~P~~~~-wg~~~~WgHa~-------S~D---lv~W~~~~~aL~P~~~~--------------D~~ 126 (431)
.+. .+|++||||..+-.... .. ....+.+. |+| +..|+...+.+.|++.+ +..
T Consensus 200 Ai~~~DG~l~LFYTG~~~~~~~~~-~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~ 278 (571)
T 2yfr_A 200 ATLNKDGSIQLYYTKVDTSDNNTN-HQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNI 278 (571)
T ss_dssp EEECTTSCEEEEEEEEECTTTTCC-EEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCC
T ss_pred eEECcCCEEEEEEeccccCCCCcc-cceEEEEEeeeeecccCCCcceecccCCCceecCCCcccccccccccccccCCcc
Confidence 344 58999999997643221 11 23445432 467 45677677777776421 333
Q ss_pred CeEeecEEEccCCeEEEEEeeccCCC-----------------------------------------ceeEEEEEecCCC
Q 014058 127 SCWSGSVTILPGDKPFILYTGIDASG-----------------------------------------QQVQNLAMPENLS 165 (431)
Q Consensus 127 gv~SGsav~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~lA~S~D~~ 165 (431)
..-.+.++.+++|+++|++.+..... ...++|+.|+|..
T Consensus 279 ~FRDP~Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~ 358 (571)
T 2yfr_A 279 AMRDAHVIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDV 358 (571)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCT
T ss_pred cCcCCeEEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCc
Confidence 44567777654599999998764321 2467788887642
Q ss_pred CCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 166 DPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 166 d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
..+..|+-. .|++.+.. ....+.-|.+ |. .+|+|||++..+.
T Consensus 359 -~n~~~We~~--~pL~~~~~--v~dm~EcP~l-f~-~dG~yyL~~S~q~ 400 (571)
T 2yfr_A 359 -KNPSVAKVY--SPLISAPM--VSDEIERPDV-VK-LGNKYYLFAATRL 400 (571)
T ss_dssp -TSCCEEEEC--CCSEECTT--TBSCCEEEEE-EE-ETTEEEEEEEEEG
T ss_pred -CCcccceec--cccccCCC--cCceeecCcE-EE-ECCEEEEEEeCCC
Confidence 123689843 57765432 1346788985 44 5899999997663
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.17 Score=50.42 Aligned_cols=188 Identities=14% Similarity=0.130 Sum_probs=102.5
Q ss_pred cceeeecCCCCccCCCc----ceE-ECCEEEEEEEECCCCCCCCCcceEEEEEeCCC-ccceecccccCCCCccCCCCeE
Q 014058 56 TSYHFRPPQNWINDPNG----PMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCW 129 (431)
Q Consensus 56 p~~H~~p~~gw~NDPnG----~i~-~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dl-v~W~~~~~aL~P~~~~D~~gv~ 129 (431)
..-=|+|+.++ +|+.+ ++. .+|+.-++|....... + ..++...+|+|. .+|++......+...+ .-++
T Consensus 13 ~~~if~~~~~~-~~~~~~yp~~v~L~dG~LLa~~~~~~~~~--~-~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~ 86 (367)
T 2ydt_A 13 NVEIFDPPTNY-RDPQVLYARPLELSDGTLLGTWENYSPEP--P-NVWFPIVKSKDGGKTWKEISKVKDTQNNW--GLRY 86 (367)
T ss_dssp EEEEECCCTTS-CTTSEEEEEEEECTTSCEEEEEEECCCSS--S-CCCEEEEEESSTTSSCEEEEEECCCSSSS--CEEE
T ss_pred ceeEecCCccc-CCCCCCceeEEEcCCCCEEEEEEeccCCC--C-CeEEEEEEECCCCcCcCcCcccCCCCCCc--cccc
Confidence 34456677763 46663 222 4888888775433221 3 567788899997 8999975433222211 1234
Q ss_pred eecEEEcc-------CCeEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCC--CCCCccCCeEE
Q 014058 130 SGSVTILP-------GDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGV--KDDMFRDPTTA 198 (431)
Q Consensus 130 SGsav~~~-------dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p-~~~--~~~~~RDP~Vv 198 (431)
.+++...+ +|++.+.+.....+ ....+.+..|+|+| ++|++.. .|.... ... .....-.|+++
T Consensus 87 ~P~l~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G----~TW~~~~--~i~~g~~~~~~~g~~~v~eP~~~ 160 (367)
T 2ydt_A 87 QPQLYELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKG----YTWEFVS--HVALGGEALPNPGLTPVWEPFLM 160 (367)
T ss_dssp EEEEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSS----SCCEEEE--EEEEESCSSCCTTCCCEEEEEEE
T ss_pred CCeEEEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCC----CCCcCCe--ecccCCCcccccCCCccccceEE
Confidence 66665544 77777766543221 23456678899987 7999853 233211 100 01112246533
Q ss_pred EecCCCeEEEEEeeeeC--Ccc-eEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEecc
Q 014058 199 WQAPDGRWRVLVGGQID--NEG-MAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI 257 (431)
Q Consensus 199 ~~~~~g~~~M~~ga~~~--~~G-~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~ 257 (431)
. .+|+.++++....+ ..+ .+.+..|+|+++|+..............--.|.+.++.+
T Consensus 161 -~-~~G~l~v~~~d~~~~~~~~q~l~~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~d 220 (367)
T 2ydt_A 161 -T-YKEKLILYYSDQRDNATHSQKLVHQTTTDLKKWSKVVDDTKYANYYARPGMPTVAKLPN 220 (367)
T ss_dssp -E-ETTEEEEEEEECCSTTTCSSEEEEEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECTT
T ss_pred -C-CCCcEEEEECCCCCCCCCCcEEEEEECCCCCCCCCceeccccCCcCCCCCcceEEECCC
Confidence 2 46777766654432 234 456678999999965322111111111223477888873
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.073 Score=52.88 Aligned_cols=144 Identities=17% Similarity=0.260 Sum_probs=81.8
Q ss_pred eEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEeeccC---
Q 014058 74 MYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDA--- 150 (431)
Q Consensus 74 i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~--- 150 (431)
+..+|+..++|.....+..+ ...+.|++|+|+.+|...-....+.. +... .-...++...||+++|.|.-...
T Consensus 155 ~~~~G~l~~~~~~~~~~~~~--~~~~~~~~S~DG~TWs~~~~~~~~~~-~~~r-pg~p~v~~l~dG~l~l~y~~~~~~~~ 230 (355)
T 3a72_A 155 LANKGKLICYYSDQRDNATY--GQTMVHQVTNDLKNWGPVVEDVTYPT-YTDR-PGMPVVTKLPNGQYFYVYEYGSFFGT 230 (355)
T ss_dssp EEETTEEEEEEEECCCTTTC--SCEEEEEEESSSSSCCCCEEEECCSS-TTCE-EEEEEEEECTTSCEEEEEEEEBCTTS
T ss_pred EccCCeEEEEECCCCCCCCC--CcEEEEEECCCCCCCCCCeeccccCc-cCCC-CCceEEEECCCCCEEEEEEECCCccc
Confidence 44699999999765423333 36799999999999976532222221 1111 11245566789999998875432
Q ss_pred -CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecC---CCeEEEEEeeeeCCcceEEEEEeC
Q 014058 151 -SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP---DGRWRVLVGGQIDNEGMAFVYWSW 226 (431)
Q Consensus 151 -~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~---~g~~~M~~ga~~~~~G~i~ly~S~ 226 (431)
.+......++|.|+ .+|....+.++.... + ....--|.|+|... +|+ .|+.+. ... .+|.|.
T Consensus 231 ~~~~~~~~~~iS~DG-----~tw~~~~~~~~~~~~-~--~~~~g~p~v~~~~~gg~~g~-ll~s~~---~~~--~v~~s~ 296 (355)
T 3a72_A 231 ETYSFPLYYRLSSDP-----ENIASAPGQRLVVSS-G--TQPTSSPYAVWTPYGGENGT-IIVSSG---TQG--TLFINK 296 (355)
T ss_dssp SSCBCBEEEEEESST-----TCCTTSCCEECCBTT-C--CCCBSSCEEEEESTTSTTCE-EEEECS---SCS--SEEEES
T ss_pred CCCceeEEEEECCCc-----ccccCcCCcceecCC-C--cccCCCCeEEECcCCCCCCe-EEEEcC---CCc--EEEEEC
Confidence 12345667889885 688754322233221 2 12346788878532 333 333332 122 255654
Q ss_pred C-C-CCcEEcc
Q 014058 227 D-F-IHWTKLD 235 (431)
Q Consensus 227 D-l-~~W~~~~ 235 (431)
| . ..|+...
T Consensus 297 ~~g~~~W~~~~ 307 (355)
T 3a72_A 297 ALGEGEWTEIP 307 (355)
T ss_dssp STTCSCBEEEC
T ss_pred CCCCCCCeECC
Confidence 4 4 7898764
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=96.32 E-value=0.081 Score=52.82 Aligned_cols=144 Identities=16% Similarity=0.250 Sum_probs=80.9
Q ss_pred eEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc-CCCCeEeecEEEccCCeEEEEEeeccCC-
Q 014058 74 MYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-DINSCWSGSVTILPGDKPFILYTGIDAS- 151 (431)
Q Consensus 74 i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~-D~~gv~SGsav~~~dg~~~l~YTg~~~~- 151 (431)
+..+|+..++|......... ...+.|++|+|+.+|...-... +...+ +..| -..++...||+++|.|.-....
T Consensus 160 ~~~~G~l~v~~~d~~~~~~~--~q~l~~~~S~DG~TWs~~~~~~-~~~~~~~rpg--~p~v~~l~dG~l~~~y~~~~~~~ 234 (367)
T 2ydt_A 160 MTYKEKLILYYSDQRDNATH--SQKLVHQTTTDLKKWSKVVDDT-KYANYYARPG--MPTVAKLPNNEYIYVYEYGGGPN 234 (367)
T ss_dssp EEETTEEEEEEEECCSTTTC--SSEEEEEEESSSSSCCCCEEEE-CCSSTTCEEE--EEEEEECTTSCEEEEEEEETCSC
T ss_pred ECCCCcEEEEECCCCCCCCC--CcEEEEEECCCCCCCCCceecc-ccCCcCCCCC--cceEEECCCCcEEEEEEecCCCC
Confidence 45689999999764321222 4568999999999997643222 21111 1112 1345566799999988753311
Q ss_pred ------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEec---CCCeEEEEEeeeeCCcceEEE
Q 014058 152 ------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA---PDGRWRVLVGGQIDNEGMAFV 222 (431)
Q Consensus 152 ------~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~---~~g~~~M~~ga~~~~~G~i~l 222 (431)
......+++|.|+ .+|....+.++.. +.+ .....-|+++|.. .+|+-++. +. . .. .+
T Consensus 235 ~~~~~~~~~~~~~~~S~DG-----~tw~~~~~~~l~~-~~~--~~~~~sp~v~~~p~~~~~g~l~~s-~~-~--~~--~v 300 (367)
T 2ydt_A 235 PPAGSDYWFPVYYRLSKDP-----QKFLNKAHHQIVS-NDG--TTPAGSPYVVWTPYGGKNGTIVVS-CG-T--RS--EI 300 (367)
T ss_dssp CCTTCSCCCBEEEEEESST-----TCCTTSCCEECCC-TTC--CCCBSSCEEEEESTTSTTCEEEEE-CS-S--CS--CE
T ss_pred cccccccccceEEEEcCCc-----cccCCcCCceeec-CCC--cccCcCceEEECcCCCCCCeEEEE-cC-C--Cc--eE
Confidence 1234567888885 6887543222322 221 1234678988863 24433332 22 1 11 26
Q ss_pred EEeCCC-C--CcEEccc
Q 014058 223 YWSWDF-I--HWTKLDH 236 (431)
Q Consensus 223 y~S~Dl-~--~W~~~~~ 236 (431)
|.|.|+ . .|+....
T Consensus 301 ~~~~~~g~~~~W~~~~~ 317 (367)
T 2ydt_A 301 FTNQALGDASAWKKWDV 317 (367)
T ss_dssp EEESSTTCTTCCEEECC
T ss_pred EEECCCCCCCcceeccC
Confidence 777654 4 7987654
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.053 Score=56.55 Aligned_cols=110 Identities=15% Similarity=0.216 Sum_probs=68.5
Q ss_pred CCeEEEEEeeccCC---C-ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEec------------
Q 014058 138 GDKPFILYTGIDAS---G-QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA------------ 201 (431)
Q Consensus 138 dg~~~l~YTg~~~~---~-~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~------------ 201 (431)
+|+++|||.-+... + ...-++|+|+|. +||+..+ ++|.+.. +....-...++-.+
T Consensus 34 ~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DL-----vhW~~~~--~aL~P~~--d~~G~~SGSav~d~~~t~g~~~~~~~ 104 (509)
T 3kf3_A 34 AKLWHLYFQYNPNATAWGQPLYWGHATSNDL-----VHWDEHE--IAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSID 104 (509)
T ss_dssp TTEEEEEEEEETTCSSCCSSBEEEEEEESSS-----SSCEECS--CCBCCSS--TTCEEEEEEEEECTTCTTSCCCTTSC
T ss_pred CCEEEEEEecCCCCCCCCCcCEEEEEEccCC-----CCcEECc--ccccccc--cCCCEEeceEEEeCCccccccccccC
Confidence 69999999855322 2 246789999995 8999853 5554332 22333445543321
Q ss_pred CCCeEEEEEeeeeCCcceEEEEEeCC-CCCcEEcc-cccccCCCCCceeeCcEEEecc
Q 014058 202 PDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD-HPLYSVQETGMWECPDIFPVSI 257 (431)
Q Consensus 202 ~~g~~~M~~ga~~~~~G~i~ly~S~D-l~~W~~~~-~~l~~~~~~~~wECPdlf~l~~ 257 (431)
.+++++|++.+.....-...++.|+| +.+|+... .|+... ....+.-|.+|..+.
T Consensus 105 p~~~l~~~YTg~~~~~q~q~lA~S~D~g~~~~k~~~nPVi~~-~~~~fRDPkVfw~~~ 161 (509)
T 3kf3_A 105 PNQRIVAIYTNNIPDNQTQDIAFSLDGGYTFTKYENNPVIDV-SSNQFRDPKVFWHED 161 (509)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEESSSSSSCEECTTCCSBCC-SCSSCEEEEEEEETT
T ss_pred CCCceEEEECCCCCCCeeEEEEEECCCCcceEEcCCCceEcC-CCCcccCCeEEEECC
Confidence 13578888876443334556788988 68999753 354432 234578888887653
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.016 Score=60.91 Aligned_cols=73 Identities=16% Similarity=0.090 Sum_probs=48.0
Q ss_pred CCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCC--------------
Q 014058 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQ-------------- 242 (431)
Q Consensus 177 ~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~-------------- 242 (431)
.||||. ..+-||.|+.. ++.|||+-.... ....+-+|+|+||.+|+..+..+....
T Consensus 9 ~NPil~-------g~~~DP~iir~--~~~YY~~~st~~-~~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~ 78 (542)
T 3zxk_A 9 TNPVLW-------EDHPALEVFRV--GSVFYYSSSTFA-YSPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGA 78 (542)
T ss_dssp ESCSCC-------SCCCSCEEEEE--TTEEEEECCCBT-EESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTT
T ss_pred cCCccC-------CCCCCCeEEEE--CCEEEEEEecCc-cCCCeEEEEcCCCCCccccccccccCCccccccccCCcccc
Confidence 388884 24579997644 679999765422 122468999999999999876542210
Q ss_pred CCCceeeCcEEEeccCC
Q 014058 243 ETGMWECPDIFPVSING 259 (431)
Q Consensus 243 ~~~~wECPdlf~l~~~g 259 (431)
.....-.|++...+.+|
T Consensus 79 ~~~~~WAP~i~~~~~~G 95 (542)
T 3zxk_A 79 YVKGIWASTLRYRRSND 95 (542)
T ss_dssp TTCSBCSCEEEEETTTT
T ss_pred cCCceECCcEEEECCCC
Confidence 12345689888875334
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.056 Score=56.54 Aligned_cols=149 Identities=12% Similarity=0.049 Sum_probs=84.8
Q ss_pred ccCCCcceEE--CCEEEEEEEECCC---CCCC-------C--CcceEEEEEeCC-CccceecccccCCCCcc-CCCCeE-
Q 014058 67 INDPNGPMYY--KGVYHLFYQYNPL---GPLF-------G--DKMIWAHSVSYD-LINWIHLSHALCPSGPY-DINSCW- 129 (431)
Q Consensus 67 ~NDPnG~i~~--~G~YHlFyq~~P~---~~~w-------g--~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~-D~~gv~- 129 (431)
..||. ++++ +|+-+|||-+... ...| . ........+|+| +.+|.+. ..|.+.... .-..++
T Consensus 248 ~~nP~-lvvD~~tG~I~L~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~~~~~ 325 (523)
T 4fj6_A 248 VGDPS-ILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDGKTWSEP-INITSQVKDPSWYFLLQ 325 (523)
T ss_dssp EEEEE-EEECTTTCCEEEEEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTTSSCCCC-EECHHHHCCTTCSEEEE
T ss_pred ccCce-EEEECCCCeEEEEEEecccccccccccccccCCCCCcceEEEEEEcCCCCccCCCC-eeecccccCCcceEEec
Confidence 46787 7774 6999999987532 0111 1 013455677776 5999874 223222100 111222
Q ss_pred -eecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEE
Q 014058 130 -SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRV 208 (431)
Q Consensus 130 -SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M 208 (431)
.|+.++..+|++++--.+....+.....+.+|+|.| .+|+... ++- ....+|.++-. ++|+.+|
T Consensus 326 g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G----~TW~~~~--~~~--------~~~~e~~vve~-~dG~L~~ 390 (523)
T 4fj6_A 326 GPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRG----KTWHLHN--LAR--------TNTTEAQVAEV-EPGVLML 390 (523)
T ss_dssp CSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CSE--------ETEEEEEEEEE-ETTEEEE
T ss_pred CCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCC----CeEEECC--CCC--------ccccCCEEEEe-cCCEEEE
Confidence 355567789987652211222234455677898876 7998753 221 12568886533 4788777
Q ss_pred EEeeeeCCcceEEEEEeCC-CCCcEEc
Q 014058 209 LVGGQIDNEGMAFVYWSWD-FIHWTKL 234 (431)
Q Consensus 209 ~~ga~~~~~G~i~ly~S~D-l~~W~~~ 234 (431)
...+.. .|...+|+|.| +..|+..
T Consensus 391 ~~R~~~--~g~r~v~~S~D~G~TWt~~ 415 (523)
T 4fj6_A 391 NMRDNR--GGSRAVATTKDLGKTWTEH 415 (523)
T ss_dssp EEEETT--CSBCEEEEESSTTSSCEEC
T ss_pred EEEecC--CCcEEEEEECCCCCccCcC
Confidence 665432 24446888866 5899874
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.23 Score=51.47 Aligned_cols=148 Identities=16% Similarity=0.190 Sum_probs=86.0
Q ss_pred ECCEEEEEEEECCC-----CCCCC-CcceEEEEE-----eCCCccce---ecccccCCCCcc----CC---CCeEeecEE
Q 014058 76 YKGVYHLFYQYNPL-----GPLFG-DKMIWAHSV-----SYDLINWI---HLSHALCPSGPY----DI---NSCWSGSVT 134 (431)
Q Consensus 76 ~~G~YHlFyq~~P~-----~~~wg-~~~~WgHa~-----S~Dlv~W~---~~~~aL~P~~~~----D~---~gv~SGsav 134 (431)
.+|+++|||...-. +.... .....++|+ |.|.++++ .+.+.+.|++.+ +. ...-..-++
T Consensus 171 ~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fRDP~vf 250 (496)
T 3vss_A 171 KNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFTF 250 (496)
T ss_dssp TTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEEE
T ss_pred CCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccCCCeeE
Confidence 68999999986421 11111 023566665 67777665 445667777543 11 122356666
Q ss_pred Ec--cCCeEEEEEeeccCC----------------------------------CceeEEEEEecCCCCCccceeeeecCC
Q 014058 135 IL--PGDKPFILYTGIDAS----------------------------------GQQVQNLAMPENLSDPLLKDWVKFSGN 178 (431)
Q Consensus 135 ~~--~dg~~~l~YTg~~~~----------------------------------~~~~q~lA~S~D~~d~~l~~w~k~~~~ 178 (431)
.+ .+|..+|++.|+... ..-.++||..++. .+..|+-. .
T Consensus 251 ~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~---D~~~We~~--~ 325 (496)
T 3vss_A 251 EDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNK---QLTEWEFL--P 325 (496)
T ss_dssp CCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESST---TSCCEEEE--E
T ss_pred ecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCC---CCCccEEe--C
Confidence 54 368889999775421 0134567766543 24789865 4
Q ss_pred cEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-----Ccc--eEEEEEeCCCC-CcE
Q 014058 179 PVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-----NEG--MAFVYWSWDFI-HWT 232 (431)
Q Consensus 179 Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-----~~G--~i~ly~S~Dl~-~W~ 232 (431)
|++..... ...+.-|.||. .+|+|||+..++.. ..| .+.-|.|+.|. .|+
T Consensus 326 PL~~a~~v--~deiErP~vf~--~dGKyYLFt~s~~~t~a~~~~g~~~~yGfVSd~L~G~Y~ 383 (496)
T 3vss_A 326 PILSANCV--TDQTERPQIYF--KDGKSYLFTISHRGTFAAGLDGPEGVYGFVGDGIRSDYQ 383 (496)
T ss_dssp EEEEEETT--BSCCEEEEEEE--ETTEEEEEEEECSTTBCTTCCCCSEEEEEEESSSSBCCE
T ss_pred ccccCCCC--CCceeCCcEEE--ECCEEEEEEecccccccccCCCCceeEEEecCCCCCCce
Confidence 88754321 34677899654 48999999876541 112 23456677664 454
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.049 Score=58.19 Aligned_cols=109 Identities=14% Similarity=0.047 Sum_probs=65.9
Q ss_pred cCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecC--CcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 137 PGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSG--NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 137 ~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~--~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
.+|+++|||--+.. + -++|+|+|. +||+..+. .+.|.+...++....-.-.++-...+|+.+|++.+..
T Consensus 50 ~~G~YHlFYQ~~P~-g---WgHa~S~DL-----vhW~~~~~~~~~aL~P~~~~D~~G~~SGSav~~~~~g~~~~~YTg~~ 120 (634)
T 3lig_A 50 STGLFHVGFLHDGD-G---IAGATTANL-----ATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVS 120 (634)
T ss_dssp TTCCEEEEEEETTS-C---EEEEEESSS-----SCCEESCSTTCEEECSCSSSCSSEEEEEEEESSCGGGSCEEEEEEEC
T ss_pred CCCEEEEEEecCCC-c---eeEEEecCc-----CceeECcCCCCceecCCCCCCCCCcEeeEEEEECCCCEEEEEEEecc
Confidence 58999999985532 2 789999995 89998621 4566554333333333334332223688888886642
Q ss_pred C---------Cc--ceEEEEEeCC-CCCcEEcc-ccccc-CCCC---CceeeCcEEE
Q 014058 215 D---------NE--GMAFVYWSWD-FIHWTKLD-HPLYS-VQET---GMWECPDIFP 254 (431)
Q Consensus 215 ~---------~~--G~i~ly~S~D-l~~W~~~~-~~l~~-~~~~---~~wECPdlf~ 254 (431)
. .. -...++.|+| +++|+... .|+.. ...+ ..|-=|.+|+
T Consensus 121 ~~~~~~~~~~~~~~q~Q~lA~S~D~g~~w~K~~~nPVi~~~p~g~~~~~fRDPkV~~ 177 (634)
T 3lig_A 121 FLPIHWSIPYTRGSETQSLAVARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFR 177 (634)
T ss_dssp SCCCCTTSCCCTTSEEEEEEEEEGGGTEEEECSSSCSBCSSSTTCCEEEEEEEEEEC
T ss_pred cccccccCcCCCCcEEEEEEEECCCCCEEEECCCCceEcCCCcccCCCccCCCeEcc
Confidence 1 12 2355677876 78999864 35433 2222 2467788887
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=95.27 E-value=0.86 Score=47.73 Aligned_cols=153 Identities=15% Similarity=0.029 Sum_probs=83.4
Q ss_pred ceEE-CCEEEEEEEECCCCCCC-CCcceEEEEEeCCC-ccceecccccCCCC-ccCCCCeEeecEEEcc-CCeEEEEEee
Q 014058 73 PMYY-KGVYHLFYQYNPLGPLF-GDKMIWAHSVSYDL-INWIHLSHALCPSG-PYDINSCWSGSVTILP-GDKPFILYTG 147 (431)
Q Consensus 73 ~i~~-~G~YHlFyq~~P~~~~w-g~~~~WgHa~S~Dl-v~W~~~~~aL~P~~-~~D~~gv~SGsav~~~-dg~~~l~YTg 147 (431)
++.. +|....||...+....+ + ........|+|. .+|+.... |..+. .....++..++.+++. +|+++|+|..
T Consensus 26 L~~~~~G~lla~~~~~~~~~~~~~-~~~i~~~rS~DgG~TW~~~~~-l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~ 103 (601)
T 1w8o_A 26 LTVTPDGDLLASYDGRPTGIGAPG-PNSILQRRSTDGGRTWGEQQV-VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVY 103 (601)
T ss_dssp EEECTTSCEEEEEEECTTSCSTTS-CCEEEEEEESSTTSSCCCCEE-EECCBCSSSCBEEEEEEEEECTTTCCEEEEEEE
T ss_pred EEECCCCCEEEEEcccCCCCCCCC-cceEEEEEeCCCCCCCCCCEE-EecCccCCCCCccccceEEEECCCCeEEEEEEe
Confidence 4444 67777888776654333 3 556778889886 89997643 33321 1122355666666663 7899999874
Q ss_pred ccC-------------C-CceeEEEEEecCCCCCccceeeeecCCcEEcC---CCCCCCCCccCCeEEEecC----CCeE
Q 014058 148 IDA-------------S-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP---PNGVKDDMFRDPTTAWQAP----DGRW 206 (431)
Q Consensus 148 ~~~-------------~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~---p~~~~~~~~RDP~Vv~~~~----~g~~ 206 (431)
... + ......+..|+|+| ++|++.. .+.. .+++ ...+..|--...-. .|+.
T Consensus 104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G----~TWs~~~---~~~~~~~~~~~-~~~~~~~g~gi~~~~~~~~G~l 175 (601)
T 1w8o_A 104 SQRQGFAGSRPGTDPADPNVLHANVATSTDGG----LTWSHRT---ITADITPDPGW-RSRFAASGEGIQLRYGPHAGRL 175 (601)
T ss_dssp ESSCCTTTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEEE---CGGGSCCSTTC-CEEEECSEECEECCSSTTTTCE
T ss_pred ecCCCccccccCCCccCCceEEEEEEEecCCC----CCCCCcc---cccccccCCCe-eEEEecCCeEEEccCCCcCceE
Confidence 211 0 11245678899986 7999753 1211 1121 11233442111112 3666
Q ss_pred EEEEeeeeCC-cceEEEEEeCC-CCCcEEcc
Q 014058 207 RVLVGGQIDN-EGMAFVYWSWD-FIHWTKLD 235 (431)
Q Consensus 207 ~M~~ga~~~~-~G~i~ly~S~D-l~~W~~~~ 235 (431)
++.+...... .....++.|+| .++|+...
T Consensus 176 ~~~~~~~~g~~~~~~~~~~S~D~G~TW~~~~ 206 (601)
T 1w8o_A 176 IQQYTIINAAGAFQAVSVYSDDHGRTWRAGE 206 (601)
T ss_dssp EEEEEEECTTSCEEEEEEEESSTTSSCEECC
T ss_pred EEEEEEcCCCCceeEEEEEECCCCcCccCCC
Confidence 6544332111 12445666766 79999754
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=93.93 E-value=0.49 Score=49.28 Aligned_cols=118 Identities=17% Similarity=0.195 Sum_probs=67.4
Q ss_pred ecEEEccCCeEEEEEeeccCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCC----
Q 014058 131 GSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD---- 203 (431)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~---- 203 (431)
+..++..+|+++|||.-+... +...-++|+|+|. +||+..+ +.| ++.. ....-...++-. .+
T Consensus 44 PNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DL-----vhW~~~~--~aL-~d~~--g~~~~SGSav~~-~~~~~g 112 (516)
T 3sc7_X 44 PNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDL-----MHWAHKP--TAI-ADEN--GVEAFTGTAYYD-PNNTSG 112 (516)
T ss_dssp EEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESSS-----SSCEEEE--EEE-CCBT--TEEEEEEEEEEC-TTCTTS
T ss_pred CeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCCC-----CcceecC--ccc-cCCC--CceeEeceEEEe-CCcccc
Confidence 333344699999999865321 3356679999995 8999863 344 2211 001123343323 22
Q ss_pred ------CeEEEEEeeeeC--CcceEEEEEeCC-CCCcEEcc-cccccCC------CC--CceeeCcEEEeccCC
Q 014058 204 ------GRWRVLVGGQID--NEGMAFVYWSWD-FIHWTKLD-HPLYSVQ------ET--GMWECPDIFPVSING 259 (431)
Q Consensus 204 ------g~~~M~~ga~~~--~~G~i~ly~S~D-l~~W~~~~-~~l~~~~------~~--~~wECPdlf~l~~~g 259 (431)
+.++|++.+... ..-...++.|+| +.+|+... .|+.... .. ..+.-|.+|.-+..|
T Consensus 113 ~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPkV~~~~~~g 186 (516)
T 3sc7_X 113 LGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSG 186 (516)
T ss_dssp SSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTTSCCEECTTCCSBCHHHHTTTCTTSSSSCEEEEEEEETTTT
T ss_pred cccCCCCeEEEEEeeeeCCCCceEEEEEEecCCCceEEEcCCCceEcCCCcccccccCCCcccCCeEEEECCCC
Confidence 258888876542 223456778877 58999864 3543211 11 146889999876333
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=93.87 E-value=0.78 Score=46.61 Aligned_cols=124 Identities=14% Similarity=0.200 Sum_probs=66.8
Q ss_pred eEEEEEeCC-CccceecccccCCC--CccCC-CCeEeecEEEccC----CeEEE-EEeeccCCCceeEEEEEecCCCCCc
Q 014058 98 IWAHSVSYD-LINWIHLSHALCPS--GPYDI-NSCWSGSVTILPG----DKPFI-LYTGIDASGQQVQNLAMPENLSDPL 168 (431)
Q Consensus 98 ~WgHa~S~D-lv~W~~~~~aL~P~--~~~D~-~gv~SGsav~~~d----g~~~l-~YTg~~~~~~~~q~lA~S~D~~d~~ 168 (431)
.....+|+| ..+|.... .|.+. ..+.. .+.-.|+.+...+ |++++ .|.... .+.....+.+|+|.+
T Consensus 188 ~~~~~~S~D~G~TWs~p~-~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~~-~g~~~~~v~~S~D~G--- 262 (449)
T 2bf6_A 188 YINLVYSDDDGKTWSEPQ-NINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNE-KGKQSSAVIYSDDSG--- 262 (449)
T ss_dssp EEEEEEESSTTSSCCCCE-ECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEECT-TCCEEEEEEEESSTT---
T ss_pred EEEEEEEcCCCccCCCCc-cCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEcC-CCCEEEEEEEECCCC---
Confidence 345677877 59998732 12111 11110 0222344455444 77766 443222 233455678899876
Q ss_pred cceeeeecCCcEEcC---CCC-------C--CCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCcEE
Q 014058 169 LKDWVKFSGNPVMTP---PNG-------V--KDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTK 233 (431)
Q Consensus 169 l~~w~k~~~~Pvi~~---p~~-------~--~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~D-l~~W~~ 233 (431)
.+|+... ++... +.+ + ...+..+|.++-. ++|+.+|+.... .|.+.+|+|.| ..+|+.
T Consensus 263 -~tW~~~~--~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vve~-~dG~l~~~~R~~---~g~~~v~~S~D~G~TWs~ 333 (449)
T 2bf6_A 263 -KNWTIGE--SPNDNRKLENGKIINSKTLSDDAPQLTECQVVEM-PNGQLKLFMRNL---SGYLNIATSFDGGATWDE 333 (449)
T ss_dssp -SSCEECC--CTTTTEECTTSCEECTTTCCCSTTCEEEEEEEEC-TTSCEEEEEEES---SSEEEEEEESSTTSCCCS
T ss_pred -CceeECC--ccCcccccccccccccccccccCCCCCCCEEEEe-cCCEEEEEEEeC---CCCEEEEEECCCCccccC
Confidence 7998742 21110 000 0 0124457775533 578888876442 46778999977 589985
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=93.71 E-value=1.3 Score=46.05 Aligned_cols=165 Identities=13% Similarity=0.062 Sum_probs=90.1
Q ss_pred CCEEEEEEEECCCCCC-C-CCcceEEEEEeCCC-ccceecccccCCCC----ccCCCCeEeecEEEcc-CCeEEEEEeec
Q 014058 77 KGVYHLFYQYNPLGPL-F-GDKMIWAHSVSYDL-INWIHLSHALCPSG----PYDINSCWSGSVTILP-GDKPFILYTGI 148 (431)
Q Consensus 77 ~G~YHlFyq~~P~~~~-w-g~~~~WgHa~S~Dl-v~W~~~~~aL~P~~----~~D~~gv~SGsav~~~-dg~~~l~YTg~ 148 (431)
+|+...||-..+.+.. + + ........|+|. .+|.....+..... +-..+++..++.+++. +|++++||+..
T Consensus 191 ~G~Lla~~~~r~~~~~D~~~-~i~i~~~rS~DgG~tWs~~~~v~~~~~~~~~~~~~~~~~nP~lvvD~~tG~I~L~~~~~ 269 (523)
T 4fj6_A 191 NGTLLGVYDIRYNSSVDLQE-KIDIGVSRSTDKGQTWEPMRVAMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWVVAAWT 269 (523)
T ss_dssp TSCEEEEEEEESSCSCCSSS-SEEEEEEEESSTTSSCCCCEEEECCTTGGGCCGGGSCEEEEEEEECTTTCCEEEEEEEC
T ss_pred CCcEEEEEeceeccCCCCcC-cEEEEEEEeCCCCCEeCCcEEeecccccccCccccccccCceEEEECCCCeEEEEEEec
Confidence 7888888866544332 2 3 556777889885 89987544443321 1124678889998875 79999998642
Q ss_pred cC----------------CCceeEEEEEecCCCCCccceeeeecCCcEEc--CCCCCCCCCccCCe-EEEecCCCeEEEE
Q 014058 149 DA----------------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMT--PPNGVKDDMFRDPT-TAWQAPDGRWRVL 209 (431)
Q Consensus 149 ~~----------------~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~--~p~~~~~~~~RDP~-Vv~~~~~g~~~M~ 209 (431)
.. .......+..|+|+| ++|.+.. .+.. ..+.+ ..-+.-|- -+-- ++|++++-
T Consensus 270 ~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G----~TWs~p~--~l~~~~~~~~~-~~~~~g~G~GI~l-~dGrLv~P 341 (523)
T 4fj6_A 270 HGMGNERAWWNSMPGMTPDETAQLMLVKSEDDG----KTWSEPI--NITSQVKDPSW-YFLLQGPGRGITM-QDGTLVFP 341 (523)
T ss_dssp CSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTT----SSCCCCE--ECHHHHCCTTC-SEEEECSEECEEC-TTSCEEEE
T ss_pred ccccccccccccccCCCCCcceEEEEEEcCCCC----ccCCCCe--eecccccCCcc-eEEecCCCcceEE-eCCeEEEE
Confidence 10 012345678899886 7998631 1111 11111 01111221 0112 47877654
Q ss_pred EeeeeC-Ccce-EEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 210 VGGQID-NEGM-AFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 210 ~ga~~~-~~G~-i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
+-.... +... .++|+.++.++|+... ... .+ .--|.++++.
T Consensus 342 ~~~~~~~g~~~s~i~~S~D~G~TW~~~~-~~~----~~-~~e~~vve~~ 384 (523)
T 4fj6_A 342 IQFIDATRVPNAGIMYSKDRGKTWHLHN-LAR----TN-TTEAQVAEVE 384 (523)
T ss_dssp EEEECTTSCEEEEEEEESSTTSSCEECC-CSE----ET-EEEEEEEEEE
T ss_pred EEEEcCCCCEEEEEEEECCCCCeEEECC-CCC----cc-ccCCEEEEec
Confidence 433322 2223 3345445579999753 222 12 3345788886
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=93.57 E-value=0.51 Score=46.96 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=78.2
Q ss_pred ccCCCcceEE-CCEEEEEEEECCCC----C---------------CCCCcceEEEEEeCC-Cccceeccc---ccCCCCc
Q 014058 67 INDPNGPMYY-KGVYHLFYQYNPLG----P---------------LFGDKMIWAHSVSYD-LINWIHLSH---ALCPSGP 122 (431)
Q Consensus 67 ~NDPnG~i~~-~G~YHlFyq~~P~~----~---------------~wg~~~~WgHa~S~D-lv~W~~~~~---aL~P~~~ 122 (431)
..+|. ++.. +|+.+|||.+++.. . .|.........+|+| .++|..... .+.+. .
T Consensus 102 ~~~Pt-~v~~~~g~I~l~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G~TWs~p~~l~~~~~~~-~ 179 (386)
T 2xzi_A 102 WGNPT-PVVDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDGNTWSKPVDLTKELTPD-G 179 (386)
T ss_dssp EEEEE-EEECTTSCEEEEEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTTSCCCCCEECHHHHSCT-T
T ss_pred ccccE-EEEeCCCCEEEEEEeccccccccCcceeccCceecccccccccccEEEEEEECCCCccCCCcccCccccccc-c
Confidence 34566 5566 78999999764421 0 111123455677887 699985321 11111 1
Q ss_pred cCCCCeEeecEEEccCCeEEEEEeeccCCCceeEEEEEecC--CCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEe
Q 014058 123 YDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPEN--LSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ 200 (431)
Q Consensus 123 ~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D--~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~ 200 (431)
+.....-.|+.+...+|++++-.. ..+.+|+| .+ .+|+.... + . . -.+|.++-.
T Consensus 180 ~~~~~~~~g~gI~l~dGrLv~p~~---------~~~~~S~D~~~G----~tW~~~~~--~-~--~------~~e~~vve~ 235 (386)
T 2xzi_A 180 WAWDAVGPGNGIRLTTGELVIPAM---------GRNIIGRGAPGN----RTWSVQRL--S-G--A------GAEGTIVQT 235 (386)
T ss_dssp CCSCCBCSSCCEECTTSCEEEEET---------TEEEEEESSTTS----CEEEEEEC--T-T--C------CSSEEEEEC
T ss_pred ceeeccCCccEEEecCCEEEEEeE---------EEEEEccCCCCC----CcccccCc--C-C--C------CCcCEEEEe
Confidence 211111224556667898766433 23567888 65 79986432 1 1 1 147775533
Q ss_pred cCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEc
Q 014058 201 APDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKL 234 (431)
Q Consensus 201 ~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~ 234 (431)
++|+.+|+.... ..+...+|+|.| .+|+..
T Consensus 236 -~dG~L~~~~r~~--~g~~r~v~~S~D-~tWt~~ 265 (386)
T 2xzi_A 236 -PDGKLYRNDRPS--QKGYRMVARGTL-EGFGAF 265 (386)
T ss_dssp -TTSCEEEEECCS--SSEEEEEEEEET-TEECCC
T ss_pred -CCCcEEEEEeCC--CCccEEEEEEeC-CccCcc
Confidence 578888776432 222467999999 999854
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=93.19 E-value=1.9 Score=45.11 Aligned_cols=149 Identities=19% Similarity=0.167 Sum_probs=79.7
Q ss_pred cCCCcceEE--CCEEEEEEEECCCCCCC----C------CcceEEEEEeCC-CccceecccccCCCC-ccCCCCeE--ee
Q 014058 68 NDPNGPMYY--KGVYHLFYQYNPLGPLF----G------DKMIWAHSVSYD-LINWIHLSHALCPSG-PYDINSCW--SG 131 (431)
Q Consensus 68 NDPnG~i~~--~G~YHlFyq~~P~~~~w----g------~~~~WgHa~S~D-lv~W~~~~~aL~P~~-~~D~~gv~--SG 131 (431)
.||. ++.+ +|+.+|||.+......+ | +.......+|+| ..+|+.... +.... ..+....+ .|
T Consensus 84 ~~P~-~~~d~~~g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G~TWs~~~~-~~~~~~~~~~~~~~~~~g 161 (601)
T 1w8o_A 84 SDPS-YLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTI-TADITPDPGWRSRFAASG 161 (601)
T ss_dssp EEEE-EEECTTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEEC-GGGSCCSTTCCEEEECSE
T ss_pred ccce-EEEECCCCeEEEEEEeecCCCccccccCCCccCCceEEEEEEEecCCCCCCCCccc-ccccccCCCeeEEEecCC
Confidence 3564 4443 78999998764321111 0 012346677887 589997542 21110 00112233 23
Q ss_pred cEEEccC----CeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEE
Q 014058 132 SVTILPG----DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWR 207 (431)
Q Consensus 132 sav~~~d----g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~ 207 (431)
+.+...+ |++++-|............+.+|+|+| ++|++.. ++-. ....|.++ .-.+|+.+
T Consensus 162 ~gi~~~~~~~~G~l~~~~~~~~g~~~~~~~~~~S~D~G----~TW~~~~--~~~~--------~~~~~~v~-~~~dG~l~ 226 (601)
T 1w8o_A 162 EGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHG----RTWRAGE--AVGV--------GMDENKTV-ELSDGRVL 226 (601)
T ss_dssp ECEECCSSTTTTCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CBCS--------SCCSEEEE-ECTTSCEE
T ss_pred eEEEccCCCcCceEEEEEEEcCCCCceeEEEEEECCCC----cCccCCC--CCCC--------CCCcCEEE-EeCCCEEE
Confidence 4444443 777766543211122345678899976 7999752 2211 12356654 33578877
Q ss_pred EEEeeeeCCcceEEEEEeCCC-CCcEEc
Q 014058 208 VLVGGQIDNEGMAFVYWSWDF-IHWTKL 234 (431)
Q Consensus 208 M~~ga~~~~~G~i~ly~S~Dl-~~W~~~ 234 (431)
|+... ....|...+|+|.|. .+|+..
T Consensus 227 ~~~r~-~~~~~~~~~~~S~DgG~tW~~~ 253 (601)
T 1w8o_A 227 LNSRD-SARSGYRKVAVSTDGGHSYGPV 253 (601)
T ss_dssp EEECC-TTCCSEEEEEEESSTTSCCCCC
T ss_pred EEEeC-CCCCCCEEEEEEcCCCCCCCCC
Confidence 74322 112466788999885 899754
|
| >2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* | Back alignment and structure |
|---|
Probab=92.92 E-value=1.2 Score=48.01 Aligned_cols=117 Identities=15% Similarity=0.176 Sum_probs=66.5
Q ss_pred EEEEEeCC-CccceecccccCCCCccCCCCeE--eecEEEccC----CeEEE-EEeeccCCCceeEEEEEecCCCCCccc
Q 014058 99 WAHSVSYD-LINWIHLSHALCPSGPYDINSCW--SGSVTILPG----DKPFI-LYTGIDASGQQVQNLAMPENLSDPLLK 170 (431)
Q Consensus 99 WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~--SGsav~~~d----g~~~l-~YTg~~~~~~~~q~lA~S~D~~d~~l~ 170 (431)
+-..+|+| ..+|..... |.+.........+ .|+.+...+ |++++ .++... ....+.+|+|+| +
T Consensus 428 i~v~~S~DgG~TWs~p~~-l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~----~~s~i~~SdDgG----~ 498 (679)
T 2sli_A 428 LAMRYSDDEGASWSDLDI-VSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSS----AELGFMYSDDHG----D 498 (679)
T ss_dssp EEEEEESSTTSSCCCCEE-CGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESS----CSEEEEEESSTT----S
T ss_pred EEEEEeCCCCccCCCCcc-cCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCC----CEEEEEEECCCC----C
Confidence 45567887 599987532 2221100111222 234455545 77766 443321 234577899986 7
Q ss_pred eeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCcEEcc
Q 014058 171 DWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD 235 (431)
Q Consensus 171 ~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~D-l~~W~~~~ 235 (431)
+|++... + .|.+ ....+|.|+ .-.+|+.+|+.... .|.+.+|+|.| +.+|+...
T Consensus 499 TW~~~~~--~--~p~~---~~~~e~~vv-e~~dG~L~~~~R~~---~G~~~v~~S~DgG~TWt~~~ 553 (679)
T 2sli_A 499 NWTYVEA--D--NLTG---GATAEAQIV-EMPDGSLKTYLRTG---SNCIAEVTSIDGGETWSDRV 553 (679)
T ss_dssp SCEEEEC--C--CCCS---CCCCCEEEE-ECTTSCEEEEECCS---SSSCEEEEESSTTSSCCCCE
T ss_pred ceEeCcc--C--CCCC---CCccceEEE-EeCCCEEEEEEEeC---CCCEEEEEEcCCCcCCCCCc
Confidence 9997532 1 1111 355688854 33578888876442 35667899988 58998653
|
| >2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* | Back alignment and structure |
|---|
Probab=92.78 E-value=0.79 Score=47.00 Aligned_cols=125 Identities=21% Similarity=0.266 Sum_probs=67.0
Q ss_pred EEEEEeCC-CccceecccccCCC--CccCCC-CeEeecEEEccC----CeEEE-EEeeccC---CCceeEEEEEecCCCC
Q 014058 99 WAHSVSYD-LINWIHLSHALCPS--GPYDIN-SCWSGSVTILPG----DKPFI-LYTGIDA---SGQQVQNLAMPENLSD 166 (431)
Q Consensus 99 WgHa~S~D-lv~W~~~~~aL~P~--~~~D~~-gv~SGsav~~~d----g~~~l-~YTg~~~---~~~~~q~lA~S~D~~d 166 (431)
.-..+|+| ..+|... ..|.+. ..+... +.-.|+.++..+ |++++ +|+.... .+.....+.+|+|.|
T Consensus 216 ~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G- 293 (471)
T 2w20_A 216 LWMSYSDDDGKTWSAP-QDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHG- 293 (471)
T ss_dssp EEEEEESSTTSSCCCC-EECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTT-
T ss_pred EEEEEECCCcCcCCCC-cccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCC-
Confidence 44567887 5999863 222221 111100 111234455555 78766 4543211 122345678999976
Q ss_pred CccceeeeecCCcEEcC-C-CC-------CC--CCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCcEEc
Q 014058 167 PLLKDWVKFSGNPVMTP-P-NG-------VK--DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKL 234 (431)
Q Consensus 167 ~~l~~w~k~~~~Pvi~~-p-~~-------~~--~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~D-l~~W~~~ 234 (431)
++|+... ++-.. + .+ ++ .....+|.++ .-++|+.+|+... ..|.+.+|+|.| ..+|+..
T Consensus 294 ---~TW~~~~--~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vv-e~~dG~L~~~~R~---~~G~~~v~~S~DgG~TWs~~ 364 (471)
T 2w20_A 294 ---KTWHAGE--AVNDNRQVDGQKIHSSTMNNRRAQNTESTVV-QLNNGDVKLFMRG---LTGDLQVATSKDGGVTWEKD 364 (471)
T ss_dssp ---SSCEECC--CTTTTEEETTEEECTTTCCCGGGCCCSEEEE-ECTTSCEEEEECC---SSSEEEEEEESSSSSSCCSC
T ss_pred ---CCcccCC--ccCcccccCccccccccccccCcCccCCEEE-EcCCCeEEEEEEe---CCCCEEEEEEcCCCcCCCCc
Confidence 7999742 22111 0 00 00 0124688854 3357888777633 246677899977 5899853
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=91.09 E-value=1.1 Score=44.14 Aligned_cols=148 Identities=14% Similarity=0.091 Sum_probs=78.9
Q ss_pred ccCCCcceEE--CCEEEEEEEECCCCC-C-------CCCcceEEEEEeCC-CccceecccccCCCC--c-cCC-CCeE--
Q 014058 67 INDPNGPMYY--KGVYHLFYQYNPLGP-L-------FGDKMIWAHSVSYD-LINWIHLSHALCPSG--P-YDI-NSCW-- 129 (431)
Q Consensus 67 ~NDPnG~i~~--~G~YHlFyq~~P~~~-~-------wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~--~-~D~-~gv~-- 129 (431)
..+|. ++++ +|+-+|||.+.+... . .. .......+|+| ..+|+... .|.+.. . ... ...+
T Consensus 86 ~~~P~-~v~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~S~DgG~TW~~~~-~l~~~~~g~~~~~~~~~~~~ 162 (382)
T 1so7_A 86 SMNPC-PLYDAQTGTLFLFFIAIPGQVTEQQQLQTRAN-VTRLCQVTSTDHGRTWSSPR-DLTDAAIGPAYREWSTFAVG 162 (382)
T ss_dssp EEEEE-EEECTTTCCEEEEEEEEESSCCHHHHHCTTCC-CCEEEEEEESSTTSSCCCCE-ECHHHHHGGGGGGEEEEEEC
T ss_pred cccce-EEEECCCCcEEEEEEEecCCCccceeecCCCC-ccEEEEEEEcCCCCcCCCCc-cCChhhcCCCCCCceeeccC
Confidence 34665 4554 588888887665321 0 11 23456778887 59998742 121110 0 000 0111
Q ss_pred eecEEEccC--CeEEE-EEeeccC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEE-E-e
Q 014058 130 SGSVTILPG--DKPFI-LYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTA-W-Q 200 (431)
Q Consensus 130 SGsav~~~d--g~~~l-~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv-~-~ 200 (431)
.|+.+...+ |++++ .|..... .......+.+|+|++ .+|++... + . . ....+.++ + .
T Consensus 163 pg~gi~l~~~~G~lv~p~~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~~~~--~-~--~-----~~~~~~~~~~~~ 228 (382)
T 1so7_A 163 PGHCLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHG----RTWARGHF--V-A--Q-----DTLECQVAEVET 228 (382)
T ss_dssp SSCCEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTT----SSCEECCC--C-S--B-----SEEEEEEEEEEC
T ss_pred CCcEeecccCCCcEEEEEEEecccccccCCCceeEEEEECCCC----ceeEcCcc--c-C--C-----CCCccEEEEEEE
Confidence 235566667 88776 5544221 023455678899976 79997532 1 1 0 11223322 1 1
Q ss_pred cCCCeEEEEEeeeeCCcceEEEEEeCC-CCCcEEc
Q 014058 201 APDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKL 234 (431)
Q Consensus 201 ~~~g~~~M~~ga~~~~~G~i~ly~S~D-l~~W~~~ 234 (431)
..+|+.+|+.... .|...+|+|.| ..+|+..
T Consensus 229 ~~dg~l~~~~r~~---~g~~~v~~S~D~G~tW~~~ 260 (382)
T 1so7_A 229 GEQRVVTLNARSH---LRARVQAQSTNDGLDFQES 260 (382)
T ss_dssp --CEEEEEEEEES---SSEEEEEEESSTTSSCCCC
T ss_pred CCCCEEEEEEecC---CCCEEEEEEcCCCCCCCCC
Confidence 1467777776442 34667899977 6899864
|
| >3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* | Back alignment and structure |
|---|
Probab=91.08 E-value=4.3 Score=40.38 Aligned_cols=147 Identities=12% Similarity=0.070 Sum_probs=78.6
Q ss_pred ccCCCcceEE-CC--EEEEEEE-ECCCCCCCC--------CcceEEEEEeCC-CccceecccccCCC---CccCCCCe--
Q 014058 67 INDPNGPMYY-KG--VYHLFYQ-YNPLGPLFG--------DKMIWAHSVSYD-LINWIHLSHALCPS---GPYDINSC-- 128 (431)
Q Consensus 67 ~NDPnG~i~~-~G--~YHlFyq-~~P~~~~wg--------~~~~WgHa~S~D-lv~W~~~~~aL~P~---~~~D~~gv-- 128 (431)
..||.-++-. .| +-+||+. |+-....|. +....-..+|+| .++|.+.. ...+. ....-.+.
T Consensus 95 v~~Pt~vv~~~tG~~~I~llvg~~~~~~~~~~~~~~~~~~~~~~l~lv~S~D~G~tWs~~~-~~~~~~~~~~~~~~~~~~ 173 (379)
T 3sil_A 95 VMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVE-TNIHDIVTKNGTISAMLG 173 (379)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEEC-CSHHHHHHHHCSEEEEEE
T ss_pred EecCceEEeCCCCCeeEEEEEEeecCCCcceeeccccCCCCceeEEEEEccCCCCcCCCCc-ccccccccccceeeeecC
Confidence 5678743333 46 8777764 332111111 022344667776 59998732 11111 00000111
Q ss_pred EeecEEEccCCeEEE-EEeeccC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCe
Q 014058 129 WSGSVTILPGDKPFI-LYTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (431)
Q Consensus 129 ~SGsav~~~dg~~~l-~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~ 205 (431)
-.|+.++..+|++++ .|..... .+...-.+.+|+| + .+|+... .+- .....+|.|+-. +|+
T Consensus 174 g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G----~tW~~~~--~~~-------~~~~~ep~vvE~--dG~ 237 (379)
T 3sil_A 174 GVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-G----ITWSLPS--GYC-------EGFGSENNIIEF--NAS 237 (379)
T ss_dssp CSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-S----SSEECCS--CCE-------ECTTCCEEEEEE--TTE
T ss_pred CCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-C----CCeEECC--CCC-------CccCCCCEEEEE--CCE
Confidence 245567778998766 2322111 1233445668988 5 7998642 221 124579997644 688
Q ss_pred EEEEEeeeeCCcceEEEEEeCC-CCCcEEc
Q 014058 206 WRVLVGGQIDNEGMAFVYWSWD-FIHWTKL 234 (431)
Q Consensus 206 ~~M~~ga~~~~~G~i~ly~S~D-l~~W~~~ 234 (431)
.+|+... .|...+|+|.| +..|+..
T Consensus 238 L~m~~R~----~g~r~v~~S~D~G~tWt~~ 263 (379)
T 3sil_A 238 LVNNIRN----SGLRRSFETKDFGKTWTEF 263 (379)
T ss_dssp EEEEECC----SSBCBCEEESSSSSCCEEC
T ss_pred EEEEEEe----CCCEEEEEEcCCCccCCCC
Confidence 8887755 24445788866 5899975
|
| >1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... | Back alignment and structure |
|---|
Probab=90.60 E-value=4.2 Score=43.43 Aligned_cols=148 Identities=15% Similarity=0.084 Sum_probs=80.3
Q ss_pred CccCCCcceEECCEEEEEE-EECCCCCC----CCCcceEEE------E-EeCC-C-----ccceecccccCCC--CccCC
Q 014058 66 WINDPNGPMYYKGVYHLFY-QYNPLGPL----FGDKMIWAH------S-VSYD-L-----INWIHLSHALCPS--GPYDI 125 (431)
Q Consensus 66 w~NDPnG~i~~~G~YHlFy-q~~P~~~~----wg~~~~WgH------a-~S~D-l-----v~W~~~~~aL~P~--~~~D~ 125 (431)
-..||. ++..+|+-+||+ .|+..... ++ ...|+. . .|+| . |+|.+. ..|.+. .....
T Consensus 107 ~v~~PT-tVv~gg~I~LL~g~y~~~~~~~~~~~~-~~~~~llLVkG~V~~S~D~Gktsk~ItWs~p-~~L~~~~~~~~~~ 183 (648)
T 1ms9_A 107 RVVDPT-VIVKGNKLYVLVGSYNSSRSYWTSHGD-ARDWDILLAVGEVTKSTAGGKITASIKWGSP-VSLKEFFPAEMEG 183 (648)
T ss_dssp EEEEEE-EEEETTEEEEEEEEESSCCSCGGGCSS-STTEEEEEEEEEEEEECGGGSCEEEEEECCC-EECGGGCCSBSSS
T ss_pred Eeeccc-eeeecccEEEEEEeecCCccccccccc-CCCcceEEEEeeeccccccccccceeeccCc-ccCcccccccccc
Confidence 455787 566789888888 45432211 12 224553 2 4765 3 479753 223221 11110
Q ss_pred ---CCe--EeecEEEccCCeEEE-EEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEE
Q 014058 126 ---NSC--WSGSVTILPGDKPFI-LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAW 199 (431)
Q Consensus 126 ---~gv--~SGsav~~~dg~~~l-~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~ 199 (431)
... -.|+.++..||++++ .+.. ..++...-.+.+|+|.+ .+|+... .+ ......+|.|+=
T Consensus 184 ~~~~~~~~GgGsGI~m~dGtLVfPv~~~-~~~g~~~s~iiySdD~G----~TW~ls~--~~-------~~~gc~EpsVvE 249 (648)
T 1ms9_A 184 MHTNQFLGGAGVAIVASNGNLVYPVQVT-NKKKQVFSKIFYSEDEG----KTWKFGK--GR-------SAFGCSEPVALE 249 (648)
T ss_dssp SBEEEEEECSEECEECTTSCEEEEEEEE-ETTCCEEEEEEEESSTT----SSCEECS--CC-------CCTTEEEEEEEE
T ss_pred ceeEEEEecCCceEEecCCcEEEEEEEE-cccccceeeEEEecCCC----CCEEECC--CC-------CCCCccceEEEE
Confidence 111 135567778998765 3222 12233444567898875 7898743 22 113468999763
Q ss_pred ecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCcEEcc
Q 014058 200 QAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD 235 (431)
Q Consensus 200 ~~~~g~~~M~~ga~~~~~G~i~ly~S~D-l~~W~~~~ 235 (431)
. +|+-+|.... . .|+..+|+|.| ...|+...
T Consensus 250 w--dG~Lmm~~R~-~--~g~R~Vy~S~D~G~TWte~~ 281 (648)
T 1ms9_A 250 W--EGKLIINTRV-D--YRRRLVYESSDMGNTWLEAV 281 (648)
T ss_dssp E--TTEEEEEEEE-T--TSCCCEEEESSTTSSCEECT
T ss_pred E--CCEEEEEEEc-c--CCcEEEEEecCCCccccccc
Confidence 3 5775444433 2 24445888977 58999754
|
| >2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* | Back alignment and structure |
|---|
Probab=90.10 E-value=4.2 Score=43.71 Aligned_cols=115 Identities=17% Similarity=0.163 Sum_probs=62.0
Q ss_pred EEEEEeCC-CccceecccccCCCCccCCCCeE--eecEEE-ccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeee
Q 014058 99 WAHSVSYD-LINWIHLSHALCPSGPYDINSCW--SGSVTI-LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVK 174 (431)
Q Consensus 99 WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~--SGsav~-~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k 174 (431)
....+|+| ..+|+... .|.+.........+ .|+.++ ..+|++++.+... ....+.+|+|+| ++|++
T Consensus 448 ~~v~rS~DgG~TWs~p~-~l~~~~~~~~~~~~~~pg~GI~~~~~GrLv~p~~~~-----~~s~v~~S~DgG----~TW~~ 517 (686)
T 2jkb_A 448 IAMTTSQNRGESWEQFK-LLPPFLGEKHNGTYLCPGQGLALKSSNRLIFATYTS-----GELTYLISDDSG----QTWKK 517 (686)
T ss_dssp EEEEEESSTTSCCCCCE-ECCCSSCTTSCCCEECSEECEECTTSSCEEEEEEET-----TEEEEEEESSTT----SSCEE
T ss_pred EEEEEECCCCCcCCCCe-ecccccCcccceeeeCCCcceEEccCCeEEEEEecC-----CcEEEEEECCCC----CeeEe
Confidence 34456777 48998753 33221110111112 223333 3578877654332 234578999986 79998
Q ss_pred ecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCcEEc
Q 014058 175 FSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKL 234 (431)
Q Consensus 175 ~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~D-l~~W~~~ 234 (431)
.. .+. |.+ ...-.|.++-. .+|..+|+.... .|.+.+++|.| +.+|+..
T Consensus 518 ~~--~~~--p~~---~~~~e~~ivel-~dG~L~~~~R~~---~G~~~v~~S~DgG~TWs~~ 567 (686)
T 2jkb_A 518 SS--ASI--PFK---NATAEAQMVEL-RDGVIRTFFRTT---TGKIAYMTSRDSGETWSKV 567 (686)
T ss_dssp EE--EEC--SCS---SCCCCEEEEEE-ETTEEEEEECCS---SSSCEEEEESSTTSSCCCC
T ss_pred Cc--ccC--CCC---CCceeeEEEEe-cCCEEEEEEEcC---CCcEeEEEeCCCCCCCccc
Confidence 53 221 111 12335664422 478888765432 24456888877 6899864
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=87.97 E-value=9.6 Score=38.41 Aligned_cols=67 Identities=16% Similarity=0.026 Sum_probs=42.4
Q ss_pred CCEEEEEEEECCCCCC---CCCcceEEEEEeCCC-ccceecccccCCCCccCCCCeEeecEEEcc-CCeEEEEEee
Q 014058 77 KGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILP-GDKPFILYTG 147 (431)
Q Consensus 77 ~G~YHlFyq~~P~~~~---wg~~~~WgHa~S~Dl-v~W~~~~~aL~P~~~~D~~gv~SGsav~~~-dg~~~l~YTg 147 (431)
+|+...|+...+.+.. .+ ........|+|. .+|+....+. ... ...+.+..+.+++. +|+++|+|+.
T Consensus 33 ~G~lla~~~~r~~~~~d~~~~-~~~i~~~rS~DgG~TWs~~~~v~-~~~--~~~~~~dp~l~~d~~~G~i~l~~~~ 104 (449)
T 2bf6_A 33 EGTLIASIDARRHGGADAPNN-DIDTAVRRSEDGGKTWDEGQIIM-DYP--DKSSVIDTTLIQDDETGRIFLLVTH 104 (449)
T ss_dssp TSCEEEEEEEETTSSCCTTSS-CEEEEEEEESSTTSSCCCCEEEE-CCS--TTCEEEEEEEEECTTTCCEEEEEEE
T ss_pred CCCEEEEEeCccCccccCCCC-cceEEEEEcCCCCCCCCCCEEee-cCC--CccccccceeEEECCCCeEEEEEec
Confidence 6777788866554322 12 356888999987 7999765433 221 12345666666654 6899998863
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=87.78 E-value=8.9 Score=37.81 Aligned_cols=157 Identities=12% Similarity=0.071 Sum_probs=84.5
Q ss_pred ceEE-CCEEEEEEEECCCC-CCCCCcceEEEEEeC---CC----ccceecccccCCCCccCCCCeEeecEEEccCCeEEE
Q 014058 73 PMYY-KGVYHLFYQYNPLG-PLFGDKMIWAHSVSY---DL----INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (431)
Q Consensus 73 ~i~~-~G~YHlFyq~~P~~-~~wg~~~~WgHa~S~---Dl----v~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l 143 (431)
++.. +|..-.|+-..+.. ..++ ...+....|+ |. .+|.... .|.... ...+..++.+++.+|+++|
T Consensus 43 Lv~~~~G~l~A~~e~~~~~~~d~g-~~~i~~~rS~~~~D~G~~~~tW~~~~-~l~~~~---~~~~~~Pt~v~~~~g~I~l 117 (386)
T 2xzi_A 43 VVRTTTGRILAFAEGRRHTNQDFG-DINLVYKRTKTTANNGASPSDWEPLR-EVVGSG---AGTWGNPTPVVDDDNTIYL 117 (386)
T ss_dssp EEECTTSCEEEEEEEESSSSCSSS-SEEEEEEEBSSSSSTTCSGGGBCCCE-EEECCS---SSEEEEEEEEECTTSCEEE
T ss_pred EEEeCCCcEEEEEEeeeCCCCCCC-ceeEEEEEeeeecCCCcCceeccCcE-EEeeCC---CCcccccEEEEeCCCCEEE
Confidence 5554 67777777555442 2345 6677888898 86 7998643 333322 2345566666654789999
Q ss_pred EEeecc------CC-----------------CceeEEEEEecCCCCCccceeeeecCCcEEc--CCCCCCCCCccCC-eE
Q 014058 144 LYTGID------AS-----------------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMT--PPNGVKDDMFRDP-TT 197 (431)
Q Consensus 144 ~YTg~~------~~-----------------~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~--~p~~~~~~~~RDP-~V 197 (431)
+|+... .. ......+..|+|++ ++|.+.. .+.. .++.+. ..+..| .-
T Consensus 118 ~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G----~TWs~p~--~l~~~~~~~~~~-~~~~~~g~g 190 (386)
T 2xzi_A 118 FLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDG----NTWSKPV--DLTKELTPDGWA-WDAVGPGNG 190 (386)
T ss_dssp EEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTT----SCCCCCE--ECHHHHSCTTCC-SCCBCSSCC
T ss_pred EEEeccccccccCcceeccCceecccccccccccEEEEEEECCCC----ccCCCcc--cCccccccccce-eeccCCccE
Confidence 995311 00 11245678888875 7998531 1211 111221 122344 21
Q ss_pred EEecCCCeEEEEEeeeeCCcceEEEEEeC--CCCCcEEcccccccCCCCCceeeCcEEEec
Q 014058 198 AWQAPDGRWRVLVGGQIDNEGMAFVYWSW--DFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (431)
Q Consensus 198 v~~~~~g~~~M~~ga~~~~~G~i~ly~S~--Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 256 (431)
|-. .+|+.++-+- ..++|+.+ ...+|+... .+... -|| .++++.
T Consensus 191 I~l-~dGrLv~p~~-------~~~~~S~D~~~G~tW~~~~-~~~~~-----~e~-~vve~~ 236 (386)
T 2xzi_A 191 IRL-TTGELVIPAM-------GRNIIGRGAPGNRTWSVQR-LSGAG-----AEG-TIVQTP 236 (386)
T ss_dssp EEC-TTSCEEEEET-------TEEEEEESSTTSCEEEEEE-CTTCC-----SSE-EEEECT
T ss_pred EEe-cCCEEEEEeE-------EEEEEccCCCCCCcccccC-cCCCC-----CcC-EEEEeC
Confidence 222 4777665442 22355444 479999643 33211 233 677775
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=87.45 E-value=2.5 Score=41.54 Aligned_cols=100 Identities=10% Similarity=0.074 Sum_probs=59.1
Q ss_pred CeEe-ecEE-EccCCeEEEEEeeccC--C-CceeEEEEEecCCCCCccc----eeeeecCCcEEcCCCCCCCCCccCCeE
Q 014058 127 SCWS-GSVT-ILPGDKPFILYTGIDA--S-GQQVQNLAMPENLSDPLLK----DWVKFSGNPVMTPPNGVKDDMFRDPTT 197 (431)
Q Consensus 127 gv~S-Gsav-~~~dg~~~l~YTg~~~--~-~~~~q~lA~S~D~~d~~l~----~w~k~~~~Pvi~~p~~~~~~~~RDP~V 197 (431)
.+|. ++.+ ..++|.+++++.+... + ....+.+..|+|++ + +|++. .++.... .....+++|.+
T Consensus 20 ~s~riP~Lv~~~~~G~l~a~~e~~~~~~~~~~~~i~~~rS~D~G----~~~~~tW~~~---~~~~~~~-~~~~~~~~P~~ 91 (382)
T 1so7_A 20 HAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDA----PTHQVQWQAQ---EVVAQAR-LDGHRSMNPCP 91 (382)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEG----GGTEEEECCC---EECTTSC-CTTEEEEEEEE
T ss_pred eEEEeCeEEEECCCCeEEEEEccCcCCCCCCCCEEEEEEeeeCC----ccccceeCCc---EEeccCC-CCCCccccceE
Confidence 3454 6666 5568998889887542 1 11225667788875 7 99852 2332211 11234779986
Q ss_pred EEecCCCeEEEEEeeeeC------------CcceEEEEEeCC-CCCcEEc
Q 014058 198 AWQAPDGRWRVLVGGQID------------NEGMAFVYWSWD-FIHWTKL 234 (431)
Q Consensus 198 v~~~~~g~~~M~~ga~~~------------~~G~i~ly~S~D-l~~W~~~ 234 (431)
+...++|+-+|+++.... ....+.+++|+| .++|+..
T Consensus 92 v~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~ 141 (382)
T 1so7_A 92 LYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSP 141 (382)
T ss_dssp EECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCC
T ss_pred EEECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCC
Confidence 665457888888764421 123467888865 6899753
|
| >1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A* | Back alignment and structure |
|---|
Probab=86.24 E-value=2.5 Score=46.25 Aligned_cols=154 Identities=10% Similarity=0.037 Sum_probs=81.8
Q ss_pred CCcceEECCEEEE-EEEECCCCCCCCCcceEEEEE-eCCCccce-ecccccCCCCccCCCCeEeecEEEcc--CCeEEEE
Q 014058 70 PNGPMYYKGVYHL-FYQYNPLGPLFGDKMIWAHSV-SYDLINWI-HLSHALCPSGPYDINSCWSGSVTILP--GDKPFIL 144 (431)
Q Consensus 70 PnG~i~~~G~YHl-Fyq~~P~~~~wg~~~~WgHa~-S~Dlv~W~-~~~~aL~P~~~~D~~gv~SGsav~~~--dg~~~l~ 144 (431)
|.--+|.+|+-++ -.... ...-. ...||-.. |+|+.++- ....-+.+...++ .+---++++..+ +|.+.+|
T Consensus 166 ~~~~f~~dG~l~~~~~~~~--~~~~~-~~~~G~~~~s~dG~~~~~~v~~~~~~~~~f~-~~yRIPaL~~~~~~~GtLLA~ 241 (781)
T 1w0p_A 166 PSASFYFDGKLIRDNIQPT--ASKQN-MIVWGNGSSNTDGVAAYRDIKFEIQGDVIFR-GPDRIPSIVASSVTPGVVTAF 241 (781)
T ss_dssp CEEEEEETTEEEEEEECCE--ECCCC-EEEEEECCSSSCEEEEEEEEEEEECCEEEEC-TTCEEEEEEECSSSTTCEEEE
T ss_pred ceeEEecCCcEEEEeccCC--CCccc-EEEeccccccCCCcccceeEEEecCCCcccC-CCCcCcEEEEccCCCCeEEEE
Confidence 3345667777776 22111 11111 45677766 67877653 2222222222221 111134445555 7999999
Q ss_pred EeeccC--CC-----ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC--
Q 014058 145 YTGIDA--SG-----QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-- 215 (431)
Q Consensus 145 YTg~~~--~~-----~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-- 215 (431)
+.+... +. .-.+.+..|+|+| ++|... ..|......-....++||.++...++|++++++.....
T Consensus 242 ad~R~~~~D~g~~~~~~~Iv~rRS~DgG----~TWs~~--~~v~~~~~~~~~~~~~dP~~v~D~~tG~I~lf~~~~~~~~ 315 (781)
T 1w0p_A 242 AEKRVGGGDPGALSNTNDIITRTSRDGG----ITWDTE--LNLTEQINVSDEFDFSDPRPIYDPSSNTVLVSYARWPTDA 315 (781)
T ss_dssp EEEEETCSSTTCTTCEEEEEEEEESSSS----SSCCCC--EESSGGGCTTSCEEEEEEEEEEETTTTEEEEEEEEEETTC
T ss_pred EcccccCCCcccccCCceEEEEEcCCCC----cccCCc--EEEecCCCCCCCCeeeCCEEEEECCCCEEEEEEEeccCCc
Confidence 987532 11 1135577899986 799852 12223211111356899998777557898887753211
Q ss_pred -C---------cceEEEEEe-CCCCCcEE
Q 014058 216 -N---------EGMAFVYWS-WDFIHWTK 233 (431)
Q Consensus 216 -~---------~G~i~ly~S-~Dl~~W~~ 233 (431)
. ...+.+.+| ++.+.|+.
T Consensus 316 ~~eg~~~~~~~~~~v~~~~S~D~G~TWS~ 344 (781)
T 1w0p_A 316 AQNGDRIKPWMPNGIFYSVYDVASGNWQA 344 (781)
T ss_dssp CSGGGCCCTTSCCEEEEEEEETTTTEECC
T ss_pred cccccccccCCCceEEEEEecCCCCcccC
Confidence 0 124555566 55789975
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 431 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 2e-86 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 8e-70 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 3e-26 | |
| d1wl7a1 | 312 | b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermo | 0.001 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 265 bits (678), Expect = 2e-86
Identities = 100/360 (27%), Positives = 142/360 (39%), Gaps = 44/360 (12%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
+QPY YHF P +NW+NDPNG +Y+ G YHLF+QYNP G +G+ + W H++S DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGN-ISWGHAISEDLTHW 62
Query: 111 IHLSHALCPSGPYDINS--CWSGSVTILPGDKP----------FILYTGI---------- 148
AL G + +SGS + +YT
Sbjct: 63 EEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSG 122
Query: 149 --DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP---NGVKDDMFRDPTTAWQAPD 203
QQ Q++A D L + NPV+ P + FRDP W
Sbjct: 123 QTVQEDQQSQSIAYSL---DDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDES 179
Query: 204 GRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG- 262
+W V I +Y S + W + + G+WECP + + ++
Sbjct: 180 QKWV--VVTSIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNST 237
Query: 263 --VDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK- 319
V TS LNPG S Y +G +D DT + GNS D+G
Sbjct: 238 KWVITSGLNPGGPPGTVGS-----GTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPD 292
Query: 320 FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ--LVQWP 377
FYA+ + + N V W N + W +PR + L G + LVQ P
Sbjct: 293 FYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 220 bits (562), Expect = 8e-70
Identities = 92/327 (28%), Positives = 146/327 (44%), Gaps = 37/327 (11%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
+ +YHF P W+NDPNG +++KG YH+FYQYNP P +G+ + W H+VS DL++W HL
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGN-ICWGHAVSDDLVHWRHL 60
Query: 114 SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWV 173
A + + +SGS K F++YT + D+V
Sbjct: 61 PVA--LYPDDETHGVFSGSAVE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFV 117
Query: 174 KFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE-GMAFVYWSWDFIHWT 232
K+ GNPV++ P FRDP +G WR+++G D + G +Y S D HW
Sbjct: 118 KYDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLFHW- 174
Query: 233 KLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292
K + ++ + T ECPD+ + G K +L S+ S + +G
Sbjct: 175 KYEGAIFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMGE 219
Query: 293 YDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANE--SDSTQDDI 350
+ + L FYA++TFF +R V+ W
Sbjct: 220 LK--------EGKLNVEKRGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTK 269
Query: 351 DKGWSGVQTVPRAIWLDKSGKQLVQWP 377
+GW+GV ++PR ++++ +L P
Sbjct: 270 REGWNGVMSLPRELYVE--NNELKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 107 bits (269), Expect = 3e-26
Identities = 44/358 (12%), Positives = 88/358 (24%), Gaps = 85/358 (23%)
Query: 67 INDPNG-PMYYKGVYHLFYQYNPLGPLFGDK--MIWAHSVSYDLINWIHLSHALCPSGPY 123
+ + +G Y G + +F M + + +W + S +
Sbjct: 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKF 116
Query: 124 DINSC--------WSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL--SDPLLKDWV 173
D N WSGS T K + YT Q L + + +
Sbjct: 117 DANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNIN 176
Query: 174 KFSGNPVMTPPNGV-----------------KDDMFRDP------TTAWQAPDGRWRVLV 210
+ +G + RDP + +
Sbjct: 177 GVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTED 236
Query: 211 G-----------------------------------GQIDNEGMAFVYWSWDFIHWTKLD 235
G ++ N + + + D+ +
Sbjct: 237 GYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMK 296
Query: 236 HPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTY-- 293
+ S T E ++F + NG + T K ++ + + Y
Sbjct: 297 PLIASNTVTDEIERANVFKM--NGKWYLFTD------SRGSKMTIDGITSNDIYMLGYVS 348
Query: 294 DPQMDIFSPDTDFHGN--SNDLRYDYGKF-YASKTFFDSAKNRRVLWAWANESDSTQD 348
+ + P + G DL + F Y+ + N V+ ++ D
Sbjct: 349 NSLTGPYKPL-NKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYAD 405
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} Length = 312 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Score = 38.0 bits (87), Expect = 0.001
Identities = 23/196 (11%), Positives = 52/196 (26%), Gaps = 21/196 (10%)
Query: 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL-------- 117
W +DP +++F+ G + S D ++W ++
Sbjct: 23 WAHDPV-IAKEGSRWYVFH--------TGSGIQIKTS--EDGVHWENMGRVFPSLPDWCK 71
Query: 118 CPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSG 177
D + W+ + G + LY + G+ + + N + ++
Sbjct: 72 QYVPEKDEDHLWAPDICFYNGI--YYLYYSVSTFGKNTSVIGLATNRTLDPRDPDYEWKD 129
Query: 178 NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHP 237
+ + DP + W + + + +L
Sbjct: 130 MGPVIHSTASDNYNAIDPNVVFDQEGQPWLSFGSFWSGIQLIQLDTETMKPAAQAELLTI 189
Query: 238 LYSVQETGMWECPDIF 253
+E E P I
Sbjct: 190 ASRGEEPNAIEAPFIV 205
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 431 | |||
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 99.93 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.75 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.69 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.54 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.49 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.38 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.36 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 99.29 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.21 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.27 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 97.91 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 97.71 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 97.58 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 97.57 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 97.52 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 97.5 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 97.36 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 96.44 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 93.41 | |
| d2ah2a2 | 399 | Trypanosoma sialidase {Parasitic flagellate protoz | 87.79 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 87.35 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 85.95 | |
| d1w0pa3 | 364 | Vibrio cholerae sialidase {Vibrio cholerae [TaxId: | 84.6 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 83.25 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 80.39 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 80.36 |
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.3e-79 Score=601.75 Aligned_cols=284 Identities=34% Similarity=0.693 Sum_probs=251.0
Q ss_pred cccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecE
Q 014058 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSV 133 (431)
Q Consensus 54 ~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsa 133 (431)
|||+|||+|+.||||||||++|++|+||||||++|.++.|| +++||||+|+|||||+++++||.|+. |..|||||||
T Consensus 2 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsa 78 (294)
T d1uypa2 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWG-NICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSA 78 (294)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSC-SCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEE
T ss_pred CCccCcccCCCCCcCCCccceEECCEEEEEEecCCCCCCCC-CcEEEEEEeCCcCCeEECCccccccc--CCCCeEEEEE
Confidence 89999999999999999999999999999999999999999 99999999999999999999999986 6689999999
Q ss_pred EEccCCeEEEEEeeccC-----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEE
Q 014058 134 TILPGDKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRV 208 (431)
Q Consensus 134 v~~~dg~~~l~YTg~~~-----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M 208 (431)
++ ++|++++|||+... ...+.|++|+|+|+ ++|+|++.|||+..++.....+||||+| |+ ++|+|+|
T Consensus 79 v~-~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~~~~~~~~fRDP~V-~~-~~g~w~M 150 (294)
T d1uypa2 79 VE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRM 150 (294)
T ss_dssp EE-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-ETTEEEE
T ss_pred Ee-cCCeEEEEEEEeeCCCCCCcceeeeEEEECCCC-----CceEeecCCceecCCCccCccccCCCcc-cc-cCCEEEE
Confidence 87 59999999998743 24577888998875 7999999999997766556789999996 55 4899999
Q ss_pred EEeeee-CCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCCCCeee
Q 014058 209 LVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDY 287 (431)
Q Consensus 209 ~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~~~~~~ 287 (431)
++|++. ++.|+|++|+|+||++|++.+. +.....++||||||||+|+ + ||||++|.+....+.
T Consensus 151 ~~g~~~~~~~G~i~ly~S~Dl~~W~~~g~-l~~~~~~~~~ECPdlf~l~--~-------------~~vl~~s~~~~~~~~ 214 (294)
T d1uypa2 151 VLGSGKDEKIGRVLLYTSDDLFHWKYEGA-IFEDETTKEIECPDLVRIG--E-------------KDILIYSITSTNSVL 214 (294)
T ss_dssp EEEEEETTTEEEEEEEEESSSSSEEEEEE-EEEETTCSCEEEEEEEEET--T-------------EEEEEEEETTTTEEE
T ss_pred EEEeeecCCccEEEEEEcCCccceeEecc-ceeCCCCCceeeceEEEeC--C-------------eeEEEEEecCCCCee
Confidence 999876 5578999999999999999885 5455567899999999997 4 899999998888999
Q ss_pred EEEeeecCCCCeeecCCCCCCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCC--CCCCCCCccccccccEEE
Q 014058 288 YVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST--QDDIDKGWSGVQTVPRAI 364 (431)
Q Consensus 288 Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~--~~~~~~gW~g~lslPR~L 364 (431)
|++|++++. +|.++. .+++|+|+ |||+|||.+ ++|||+||||+++... .++.+.+|+|+|||||||
T Consensus 215 y~~G~~~~~--~f~~~~-------~~~lD~G~dfYA~qtf~~--~~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRel 283 (294)
T d1uypa2 215 FSMGELKEG--KLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPREL 283 (294)
T ss_dssp EEEEEEETT--EEEEEE-------EEESCCSSSCEEEEECBS--CSSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEE
T ss_pred eEeeeecCC--eEEeec-------ceEEccCCceeeccCccC--CCCEEEEEECCCCcccccCCCccCCcccceeeCEEE
Confidence 999999964 888775 57899999 999999987 4899999999998654 345567999999999999
Q ss_pred EEecCCCeEEecc
Q 014058 365 WLDKSGKQLVQWP 377 (431)
Q Consensus 365 ~l~~~G~~L~q~P 377 (431)
+|+ +| +|+|+|
T Consensus 284 ~l~-~~-~L~q~P 294 (294)
T d1uypa2 284 YVE-NN-ELKVKP 294 (294)
T ss_dssp EEE-TT-EEEEEE
T ss_pred EEE-CC-EEEecC
Confidence 995 66 799998
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=2.7e-78 Score=608.59 Aligned_cols=310 Identities=31% Similarity=0.575 Sum_probs=253.4
Q ss_pred CCCCcccceeeecCCCCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc-cC-CCC
Q 014058 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-YD-INS 127 (431)
Q Consensus 50 ~~~~~Rp~~H~~p~~gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~-~D-~~g 127 (431)
++++|||+|||+|+.||||||||++|++|+|||||||||.++.|| +++||||+|+|||||+++|+||.|+.. .| ..|
T Consensus 3 y~~p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g-~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~ 81 (353)
T d1y4wa2 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWG-NISWGHAISEDLTHWEEKPVALLARGFGSDVTEM 81 (353)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSC-SCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBE
T ss_pred CCCCCcCcEeecCCCCCcCCCccceEECCEEEEEEecCCCCCCCC-CeEEEEEEeccccceeECCccccCCccCcCCCCc
Confidence 679999999999999999999999999999999999999999999 999999999999999999999999853 33 467
Q ss_pred eEeecEEEccCC----------eEEEEEeeccC------------CCceeEEEEEecCCCCCccceeeee-cCCcEEcCC
Q 014058 128 CWSGSVTILPGD----------KPFILYTGIDA------------SGQQVQNLAMPENLSDPLLKDWVKF-SGNPVMTPP 184 (431)
Q Consensus 128 v~SGsav~~~dg----------~~~l~YTg~~~------------~~~~~q~lA~S~D~~d~~l~~w~k~-~~~Pvi~~p 184 (431)
||||||+++.+| .++++|||+.. ...|.|++|+|+|.+ ++|+|+ +.||||..+
T Consensus 82 ~~SGsav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~ 157 (353)
T d1y4wa2 82 YFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNP 157 (353)
T ss_dssp EEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSC
T ss_pred cccCceEecCCCccccccCCCceEEEEEeeeecccccccCcccccCCcEEEEEEEECCCC----cceEEecCCCeEecCC
Confidence 999999986443 47889999743 245789999998864 688886 579999654
Q ss_pred C-C--CCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCcc
Q 014058 185 N-G--VKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTI 261 (431)
Q Consensus 185 ~-~--~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~ 261 (431)
+ + ....+||||+|+|. +++.|+|++++ ....|+|+||+|+||++|++.+.+......++||||||||+|+.++
T Consensus 158 ~~~~~~~~~~fRDP~V~~~-~~~~~~~~~~~-~~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~-- 233 (353)
T d1y4wa2 158 PSPYEAEYQNFRDPFVFWH-DESQKWVVVTS-IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS-- 233 (353)
T ss_dssp CTTCGGGTTSEEEEEEEEE-TTTTEEEEEEE-EGGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT--
T ss_pred CCCCcccccccCCCceEEE-CCCCEEEEEEe-ecCCCeEEEEecCCCCceEEeccccccCCCCcceeeeEEEEeecCC--
Confidence 3 2 23469999998776 34444444444 4446889999999999999998765544567899999999997554
Q ss_pred ceecccCCCCeeeEEEEeeCC-------CCeeeEEEeeecCCCCeeecCCCC--CCCCCceecccCC-CcccceeecCCC
Q 014058 262 GVDTSVLNPGVKHVLKTSLFS-------DKHDYYVLGTYDPQMDIFSPDTDF--HGNSNDLRYDYGK-FYASKTFFDSAK 331 (431)
Q Consensus 262 ~~~~~~~~~~~k~vl~~s~~~-------~~~~~Y~vG~~d~~~~~f~p~~~~--~~~~~~~~lD~G~-fYA~qtf~d~~~ 331 (431)
+++.+|||+.+... ...+.|++|+||+. +|+|+.+. ......++||+|+ |||+|||.+..+
T Consensus 234 -------~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~ 304 (353)
T d1y4wa2 234 -------GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSL 304 (353)
T ss_dssp -------SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCG
T ss_pred -------CCceEEEEEecccCCCCcccccccceEEEEEecCc--eeeecCCccccCCCccceeecCcCeeECCceeCCCC
Confidence 23569999887532 34688999999975 78876532 2234467899999 999999998767
Q ss_pred CeEEEEEeccCCCCCCCCCCCCccccccccEEEEEecCC--CeEEecc
Q 014058 332 NRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSG--KQLVQWP 377 (431)
Q Consensus 332 grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~l~~~G--~~L~q~P 377 (431)
|||||||||++++...+..+.+|+|+|||||||+|+++| .+|+|+|
T Consensus 305 gRri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 305 NDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp GGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEecCCCccCCCCCCCCcceeeEeCEEEEEEECCCCCEEEEcC
Confidence 999999999999887777788999999999999998654 3799998
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=2.1e-25 Score=227.34 Aligned_cols=275 Identities=15% Similarity=0.127 Sum_probs=181.5
Q ss_pred ccCCCcceE-ECCEEEEEEEECCCCCCCCC--cceEEEEEeCCCccceecccccCCCC--------ccCCCCeEeecEEE
Q 014058 67 INDPNGPMY-YKGVYHLFYQYNPLGPLFGD--KMIWAHSVSYDLINWIHLSHALCPSG--------PYDINSCWSGSVTI 135 (431)
Q Consensus 67 ~NDPnG~i~-~~G~YHlFyq~~P~~~~wg~--~~~WgHa~S~Dlv~W~~~~~aL~P~~--------~~D~~gv~SGsav~ 135 (431)
+.|++|-+. ++|.+++|++..|....+.. ...+.|+.|+||.+|++.+.++.+.. ..+..+-|||||++
T Consensus 57 l~d~~g~~~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~ 136 (440)
T d1oyga_ 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATF 136 (440)
T ss_dssp EECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred eECCCCCEEEECCEEEEEEEeCCCCCCCCCeEEEEEeecCCCccCCCEECccccCCCccccccccccCCCCccCccceEE
Confidence 678888554 79999999998865433321 23455666889999999998875542 12345679999998
Q ss_pred ccCCeEEEEEeeccCC--CceeEEEEE----ecCCCCCccceeeeecCCcEEcCCCC-----------------CCCCCc
Q 014058 136 LPGDKPFILYTGIDAS--GQQVQNLAM----PENLSDPLLKDWVKFSGNPVMTPPNG-----------------VKDDMF 192 (431)
Q Consensus 136 ~~dg~~~l~YTg~~~~--~~~~q~lA~----S~D~~d~~l~~w~k~~~~Pvi~~p~~-----------------~~~~~~ 192 (431)
.+||+++|||||.... ..|++..|. +++. ...|++...+++|-.+++ .+..+|
T Consensus 137 ~~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~----~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~f 212 (440)
T d1oyga_ 137 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDS----SLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTL 212 (440)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSS----CEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCC
T ss_pred ccCCeEEEEEEeccCCCCCcceEEEEEEEEeecCC----cceeecccCCceeecCCCccceeeecccccCCCCCCCcccc
Confidence 8899999999997532 333322221 2222 267777655565533322 124589
Q ss_pred cCCeEEEecCCCeEEEEEeeeeCC------------------------------------------cceEE-EEEeCCCC
Q 014058 193 RDPTTAWQAPDGRWRVLVGGQIDN------------------------------------------EGMAF-VYWSWDFI 229 (431)
Q Consensus 193 RDP~Vv~~~~~g~~~M~~ga~~~~------------------------------------------~G~i~-ly~S~Dl~ 229 (431)
|||+|+ . .+|+|||++++.... .|.|. ++.|+|+.
T Consensus 213 RDP~v~-~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~ 290 (440)
T d1oyga_ 213 RDPHYV-E-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYT 290 (440)
T ss_dssp EEEEEE-E-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSS
T ss_pred cCCcee-e-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCcc
Confidence 999964 5 379999999875310 13444 45699999
Q ss_pred CcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC-------CCCe----eeEEEeeecCCCC
Q 014058 230 HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF-------SDKH----DYYVLGTYDPQMD 298 (431)
Q Consensus 230 ~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~-------~~~~----~~Y~vG~~d~~~~ 298 (431)
+|++.+.++......++||||++|+++ | ||+|+.|.. ..+. ..++||+ .-.+
T Consensus 291 ~We~~~pLl~a~~v~d~~ErP~I~~~n--G-------------KYYLFtss~~~~~a~~~~~~~~~~~~g~Vsd--sl~G 353 (440)
T d1oyga_ 291 LKKVMKPLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVSN--SLTG 353 (440)
T ss_dssp EEEEEEEEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEES--STTC
T ss_pred cceecCcceeccCCCCeEECCEEEEEC--C-------------EEEEEEecccccccCCCcCCCCceEEEEECC--CCCC
Confidence 999987655555567799999999998 6 888887642 1111 2244553 3345
Q ss_pred eeecCCCC-CCCCCceecccCC-CcccceeecCCCCeEEEEEeccCCCCCCCCCCCCccccccccEEEEEecC
Q 014058 299 IFSPDTDF-HGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKS 369 (431)
Q Consensus 299 ~f~p~~~~-~~~~~~~~lD~G~-fYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~lslPR~L~l~~~ 369 (431)
.|+|.+.- .........|++. .|+..+|.+...+++++.+||.++.... ...|.++-+.+|.|+.+
T Consensus 354 py~PlN~sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~~~~-----~~g~t~APt~~l~l~g~ 421 (440)
T d1oyga_ 354 PYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYA-----DKQSTFAPSFLLNIKGK 421 (440)
T ss_dssp CCEEGGGTSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTTSCS-----SCCCEECBCEEEEEETT
T ss_pred CCeecCCCcceeccCCCCCcCcccceeEEecCCCCceEEEEEeecCcCccc-----ccCCccCCcEEEEEcCC
Confidence 78877521 0001112457777 6999999876557889999999997432 23477777888888644
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.75 E-value=1.1e-17 Score=164.16 Aligned_cols=184 Identities=18% Similarity=0.215 Sum_probs=128.7
Q ss_pred cceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecc-cccCCCC---ccCCCCeEeecEEEccCCeEEEEEee
Q 014058 72 GPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSG---PYDINSCWSGSVTILPGDKPFILYTG 147 (431)
Q Consensus 72 G~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~-~aL~P~~---~~D~~gv~SGsav~~~dg~~~l~YTg 147 (431)
|+++++|+|||+|+..- .++ .+++|+|+|+|++||+..+ +++.|+. .++..||+++.++.. +|+++|+||+
T Consensus 49 ~~i~~~g~~~ll~r~~~---~~~-~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~~-~d~yym~yt~ 123 (327)
T d1vkda_ 49 AVVPYNGEFVGVFRIDH---KNT-RPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTYYITFCT 123 (327)
T ss_dssp EEEEETTEEEEEEEEEE---TTS-CEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTEEEEEEEE
T ss_pred EEEEECCEEEEEEEecC---CCC-ceEEEEEEcCCccCCEeCCCCeecCCCCCcccccCcEEcceEEEE-CCEEEEEEEe
Confidence 68899999999999742 345 8999999999999999775 5677764 356679999999874 8999999998
Q ss_pred ccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee---CCcceEEEEE
Q 014058 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI---DNEGMAFVYW 224 (431)
Q Consensus 148 ~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~---~~~G~i~ly~ 224 (431)
.. ...++++|+|+|. ++|+|.. +++. ..-||+.++....+|+|+|+.-... ...|.|.+.+
T Consensus 124 ~~--~~~~i~lA~S~D~-----~~w~k~g--~~~~-------~~~kd~~lfpeki~Gky~ml~Rp~~~~~~~~~~I~la~ 187 (327)
T d1vkda_ 124 DD--HGPTIGVGMTKDF-----KTFVRLP--NAYV-------PFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIFLSE 187 (327)
T ss_dssp ES--SSEEEEEEEESSS-----SSEEEEC--CSSS-------SSEEEEEECSSCBTTBEEEEEEECCSSSCSCCCEEEEE
T ss_pred cC--CCcEEEEEEecCc-----chheecC--CccC-------ccccCceEeeeeccCeEEEEEeeccCCCcccceEEEEc
Confidence 64 4577899999986 8999973 2322 2347876433335889999964332 2345789999
Q ss_pred eCCCCCcEEcccccccCCCCCcee------eCcEEEeccCCccceecccCCCCeeeEEEEeeC--CCCeeeEEEee
Q 014058 225 SWDFIHWTKLDHPLYSVQETGMWE------CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF--SDKHDYYVLGT 292 (431)
Q Consensus 225 S~Dl~~W~~~~~~l~~~~~~~~wE------CPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~--~~~~~~Y~vG~ 292 (431)
|+||.+|+....++.. ...+.|| +|.-++.+ ..|++++... ...+..|.+|-
T Consensus 188 S~Dl~~W~~~~~v~~~-~~~~~wd~~~vG~gpppI~t~---------------~Gwl~iYHgv~~~~~~~~Y~~g~ 247 (327)
T d1vkda_ 188 SPDMIHWGNHRFVLGR-SSYNWWENLKIGAGPYPIETS---------------EGWLLIYHGVTLTCNGYVYSFGA 247 (327)
T ss_dssp ESSSSCBEEEEEEECC-CSSCGGGSSEEEECSCCEEET---------------TEEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCcccccccceeccc-CCCCceeeeeecCCCCcEEcc---------------CcEEEEEEeccccCCCcEEEEEE
Confidence 9999999976543332 2334444 34444443 2566665431 12334588886
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.69 E-value=2e-15 Score=144.85 Aligned_cols=191 Identities=14% Similarity=0.129 Sum_probs=126.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc-------CCCCeEeecEEEccCC
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGD 139 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~-------D~~gv~SGsav~~~dg 139 (431)
++||. +++++|+||||..... + ...+.+++|+||+||+.++.++.+.... ...++|++.++. .+|
T Consensus 10 ihDP~-vi~~~g~YY~~~t~~~----~--~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 81 (291)
T d1uv4a1 10 LHDPT-MIKEGSSWYALGTGLT----E--ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNG 81 (291)
T ss_dssp CSSCE-EEEETTEEEEEEECCT----T--SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETT
T ss_pred ccCCE-EEEECCEEEEEEecCC----C--CCcEEEEECCCCCCCEECcccccCCcccccccCCccCCcccceEEEE-ECC
Confidence 45998 8999999999986422 1 3458899999999999998877654321 135799999876 599
Q ss_pred eEEEEEeeccCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcc
Q 014058 140 KPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (431)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G 218 (431)
+++|+|++.... ....+++|+|++.. ...|+.. ++++..... .....+||.|++. ++|++||+++... .|
T Consensus 82 ~yylyy~~~~~~~~~~~i~~a~s~~~~---~Gpw~~~--~~~~~~~~~-~~~~~iDp~vf~D-~dG~~Y~~~~~~~--~~ 152 (291)
T d1uv4a1 82 KYWLYYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELTFD-KDGNPWLAFGSFW--SG 152 (291)
T ss_dssp EEEEEEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEEEC-TTSCEEEEECBST--TC
T ss_pred EEEEEEEecCCCCCcceEEEEEeCCCC---CCCCCcC--ccccccccC-CCCCccCceEEEe-cCCcEEEEecccC--Cc
Confidence 999999986543 45677899997731 1358764 234432221 2346789997654 7899999997532 23
Q ss_pred eEEEEE-eCCCCCcEEcccc--c-ccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC---CCeeeEEEe
Q 014058 219 MAFVYW-SWDFIHWTKLDHP--L-YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS---DKHDYYVLG 291 (431)
Q Consensus 219 ~i~ly~-S~Dl~~W~~~~~~--l-~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~---~~~~~Y~vG 291 (431)
|.+++ +.|... ..+++ + .........|||.+|+.+ | +++|++|... .....|.++
T Consensus 153 -i~i~~l~~~~~~--~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~Yyl~~S~~~~~~~~~~~y~v~ 214 (291)
T d1uv4a1 153 -IKLTKLDKSTMK--PTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFDKCCDGVNSTYKIA 214 (291)
T ss_dssp -EEEEEECTTTCS--EEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEECSSSSSCCEEEEE
T ss_pred -eEEEeecccccc--CcCceeEEEecCCCCccccccEEEEEC--C-------------EEEEEEecCcccCCCCCCceeE
Confidence 44554 344433 22322 2 222345689999999987 5 8888888642 123445554
Q ss_pred e
Q 014058 292 T 292 (431)
Q Consensus 292 ~ 292 (431)
-
T Consensus 215 ~ 215 (291)
T d1uv4a1 215 Y 215 (291)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.54 E-value=1.9e-13 Score=131.15 Aligned_cols=182 Identities=14% Similarity=0.094 Sum_probs=118.1
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCcc-------CCCCeEeecEEEccCC
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGD 139 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~-------D~~gv~SGsav~~~dg 139 (431)
+.||+ +++++|+||||... .++..++|+||+||+.++.+|.+...+ ...++|++.++. .+|
T Consensus 7 ~~DP~-v~~~~g~yYl~~t~----------~gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 74 (318)
T d1gyha_ 7 VHDPV-MTREGDTWYLFSTG----------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKG 74 (318)
T ss_dssp CSSCE-EEEETTEEEEEESE----------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETT
T ss_pred CCCCE-EEEECCEEEEEEee----------CCEEEEECCCCCCCeECCccccCCccccccCCCcCCCceECCEEEE-EcC
Confidence 46999 88999999998531 235677999999999999888654321 235799999876 599
Q ss_pred eEEEEEeeccCC-CceeEEEEEecCCC-CCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCc
Q 014058 140 KPFILYTGIDAS-GQQVQNLAMPENLS-DPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (431)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~lA~S~D~~-d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~ 217 (431)
++++||++.... ....+++|++.... ......|++. ..+....+......++||.|+ .+++|++||+++....
T Consensus 75 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~iDp~v~-~d~dG~~Yl~~~~~~~-- 149 (318)
T d1gyha_ 75 LFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESVPQRDLWNAIAPAII-ADDHGQVWMSFGSFWG-- 149 (318)
T ss_dssp EEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEE-ECTTSCEEEEECBSTT--
T ss_pred ceEEEEEEecCCCcccceeEEEEeccCCCccccccccC--ceecccCCCCCCCceEccceE-eecCCcEEEeccCCCC--
Confidence 999999987543 45566777775321 1112578764 234433333345678999965 4479999999986432
Q ss_pred ceEEEEEe-CCCC------CcEEccc----cccc--CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 218 GMAFVYWS-WDFI------HWTKLDH----PLYS--VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 218 G~i~ly~S-~Dl~------~W~~~~~----~l~~--~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
.+.+.+. .|+. .|..... ++.. .....++|||.+|+.+ | +++|++|..
T Consensus 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~yS~~ 210 (318)
T d1gyha_ 150 -GLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp -CEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred -CeeeEecCccceeeccccccccccccccceeeccCCCCCceeecCEEEEEC--C-------------EEEEEEecC
Confidence 2233332 3332 2322211 1111 1134589999999997 5 788888864
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.49 E-value=4e-13 Score=129.28 Aligned_cols=182 Identities=17% Similarity=0.182 Sum_probs=119.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC--------ccCCCCeEeecEEEc
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--------PYDINSCWSGSVTIL 136 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~--------~~D~~gv~SGsav~~ 136 (431)
-|..||. +++++|+|+||.. + .++..++|+||+||+.++.+|.... ..+..++|++.++.
T Consensus 22 ~~~~DP~-i~~~~g~yY~~~t--------~--~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~- 89 (312)
T d1wl7a1 22 LWAHDPV-IAKEGSRWYVFHT--------G--SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICF- 89 (312)
T ss_dssp CBCSSCE-EEEETTEEEEEES--------E--ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-
T ss_pred cCcCCCE-EEEECCEEEEEEe--------c--CCceEEEcCCCCCceECcccccCCcccccccCCcccCCceEcceEEE-
Confidence 3668999 8899999999842 1 2467899999999999998886432 23567899999887
Q ss_pred cCCeEEEEEeeccCC-CceeEEEEEecC--CCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 137 PGDKPFILYTGIDAS-GQQVQNLAMPEN--LSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 137 ~dg~~~l~YTg~~~~-~~~~q~lA~S~D--~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
.+|+++|+||+.... ....+++|.+.. ..++. ..|++. .|++..... +...++||.++ .+++|++||+.+..
T Consensus 90 ~~g~yyl~~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~--~~~~~~~~~-~~~~~iD~~~f-~d~dG~~y~~~~~~ 164 (312)
T d1wl7a1 90 YNGIYYLYYSVSTFGKNTSVIGLATNRTLDPRDPD-YEWKDM--GPVIHSTAS-DNYNAIDPNVV-FDQEGQPWLSFGSF 164 (312)
T ss_dssp ETTEEEEEEEECCTTCCCEEEEEEEESCSCTTSTT-CCCEEE--EEEEEECTT-SSSCCCSCEEE-ECTTSCEEEEECBS
T ss_pred eCCEEEEEEEeecCCcccceeeEEEEecccCCCCc-cccccc--cceecCCCC-CCCCcCCCcee-EccCCcEEEeecCC
Confidence 599999999987643 444556665432 22232 456653 355432221 34578999965 45799999998764
Q ss_pred eCCcceEEEEE-eCCCCCcEEccccccc---CCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 214 IDNEGMAFVYW-SWDFIHWTKLDHPLYS---VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 214 ~~~~G~i~ly~-S~Dl~~W~~~~~~l~~---~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
. +.+.+++ +.|..........+.. .......|+|.+|+.+ | +++|++|..
T Consensus 165 ~---~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~--g-------------~yYl~ys~~ 218 (312)
T d1wl7a1 165 W---SGIQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (312)
T ss_dssp T---TCEEEEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred C---CceeEEEEcCcCCcCcCCceEEEecccCCCCCcccccEEEEEC--C-------------cEEEEEecC
Confidence 3 2344554 3443332211122211 1234578999999987 5 888888763
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.38 E-value=7.2e-11 Score=113.57 Aligned_cols=178 Identities=15% Similarity=0.157 Sum_probs=113.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCc------cCCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP------YDINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~------~D~~gv~SGsav~~~d 138 (431)
|+..||. +++++|+|+||+.... + ...+..++|+||+||+.++.+|..... .....+|.+.++. .+
T Consensus 9 ~~~aDP~-vi~~~~~yY~~~tt~~----~--~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 80 (317)
T d1yrza2 9 GFHPDPS-IVRVGDDYYIATSTFE----W--FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HD 80 (317)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E--ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEEccCC----C--CCCeEEEECCCCCCCeECCccccCccccccCCCcccceeecceEEE-EC
Confidence 4568999 7899999999875221 1 123556799999999999888754432 2335689998876 59
Q ss_pred CeEEEEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 139 DKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 139 g~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|+++|+|+..... ....+.+|++.+.. ..|+. |+.. .....||.++ .+++|+.||+.+...
T Consensus 81 G~~ylyy~~~~~~~~~~~~~~~~~~~a~~p~----gp~~~----~~~~------~~~~iDp~~f-~D~dG~~Yl~~~~~~ 145 (317)
T d1yrza2 81 GTFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL------NSSGFDPSLF-HDDDGRKWLVNMIWD 145 (317)
T ss_dssp TEEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC------CCSCSCCEEE-ECTTSCEEEEEEEEC
T ss_pred CEEEEEEEEeccCCCCcccceEEEEecCCCC----CCccc----eeee------cCCccCCcEE-EecCCCEEEEEeccC
Confidence 9999999875431 33445567776653 34542 3332 1345799964 557999999987654
Q ss_pred CC-----cceEEEEE-eCCCCCcEEcccc--cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeCC
Q 014058 215 DN-----EGMAFVYW-SWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (431)
Q Consensus 215 ~~-----~G~i~ly~-S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~~ 282 (431)
.. ...+.+.. +++ .++..+.+ +.........|.|.+|+.+ | +++|++|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~yyl~~s~~~ 204 (317)
T d1yrza2 146 YRKGNHPFAGIILQEYSEA--EQKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGG 204 (317)
T ss_dssp CCTTSCSEEEEEEEEEETT--TTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cCCCCccccceeeeecCcc--cCeEcCCceEEEeccCCCcccCceEEEEC--C-------------EEEEEEccCC
Confidence 21 11222322 333 34444332 2223345578999999987 5 7888887643
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.36 E-value=1.2e-10 Score=111.78 Aligned_cols=179 Identities=16% Similarity=0.144 Sum_probs=115.3
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC------ccCCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG------PYDINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~------~~D~~gv~SGsav~~~d 138 (431)
|+..||. +++++|+|+||+.... + ...+.-++|+||+||+.++.+|.... ..+..++|.+.++. .+
T Consensus 8 ~~~aDP~-v~~~~~~yY~~~tt~~----~--~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 79 (321)
T d1y7ba2 8 GFNPDPS-ICRADTDYYIATSTFE----W--FPGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSY-HD 79 (321)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E--ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEEecCC----C--CCCeEEEECCCccCCEEccccccCCcccccCCCcccCcccCceEEE-EC
Confidence 3557998 8899999999985422 1 12355689999999999988775332 22345799999876 59
Q ss_pred CeEEEEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 139 DKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 139 g~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|+++|+|+..... ..+.+.+|++++.. ..|+.. ..+ .....||.++ .+++|+.+|+++...
T Consensus 80 g~yylyys~~~~~~~~~~~~~~~~a~a~~p~----Gp~~~~---~~~-------~~~~~D~~~~-~d~dg~~~~~~~~~~ 144 (321)
T d1y7ba2 80 GKFWLIYTDVKVTDGMWKDCHNYLTTCESVD----GVWSDP---ITL-------NGSGFDASLF-HDNDGKKYLVNMYWD 144 (321)
T ss_dssp TEEEEEEEEESCCSSSCCCEEEEEEEESSTT----SCCCCC---EEC-------CCSCSCCEEE-ECTTSCEEEEEEEEC
T ss_pred CEEEEEEEeeccCCCCccceeeEeeecCCCC----CCcccc---eee-------cccccCCcEE-EEcCCCEEEEEeccC
Confidence 9999999986432 34567788887764 345431 111 1245799954 557899999887543
Q ss_pred C-----Cc-ceEEEEEeCCCCCcEEcccccccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 215 D-----NE-GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 215 ~-----~~-G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
. .. +..+...++|..+.......+.........|.|.+|+-+ | +++|+.|..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~yyl~~s~~ 202 (321)
T d1y7ba2 145 QRTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIG--D-------------YYYLFTAEG 202 (321)
T ss_dssp CCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred CCccccCccceeeEeeCCCcceEcCCceEEeeccCCCccccceEEEEC--C-------------EEEEEEcCC
Confidence 1 11 223333456665544322223333334467999999976 4 777777754
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=99.29 E-value=1.1e-09 Score=105.38 Aligned_cols=179 Identities=16% Similarity=0.162 Sum_probs=114.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCC------ccCCCCeEeecEEEccC
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG------PYDINSCWSGSVTILPG 138 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~------~~D~~gv~SGsav~~~d 138 (431)
|+..||. +++++|+||||+... .. ...+..++|+||+||+.++.+|.... ..+..++|.+.+.. .+
T Consensus 9 ~~~aDP~-v~~~~~~yY~~~tt~-----~~-~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~~-~~ 80 (322)
T d2exha2 9 GFHPDPS-ICRVGDDYYIAVSTF-----EW-FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SD 80 (322)
T ss_dssp SSCCSCE-EEEETTEEEEEECCB-----TE-ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCE-EEEECCEEEEEEcCC-----CC-CCCcEEEECCCcCCcEEcccccccccccccCCCcccCCcccceEEE-EC
Confidence 5668999 889999999998521 11 22356689999999999987764322 22346799999876 59
Q ss_pred CeEEEEEeeccCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee
Q 014058 139 DKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (431)
Q Consensus 139 g~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~ 214 (431)
|+++|+|+..... ......++.+++.. ..|++ |+... ....||.++ .+.+|+.||+.+...
T Consensus 81 G~yylyys~~~~~~~~~~~~~~~~~~sd~~~----gp~~~----~~~~~------~~~~dp~~f-~d~dG~~Yl~~~~~~ 145 (322)
T d2exha2 81 GKFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLF-HDEDGRKYLVNMYWD 145 (322)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEE-ECTTSCEEEEEEEEC
T ss_pred CEEEEEEEeecccCCCccccceEEEecCCCC----CCccc----ceEec------CCCCCCCeE-EEcCCCEEEEecccC
Confidence 9999999875431 22344566665542 24542 33321 234699965 447999999987654
Q ss_pred CC---cceEEEE-EeCCCCCcEEcccc--cccCCCCCceeeCcEEEeccCCccceecccCCCCeeeEEEEeeC
Q 014058 215 DN---EGMAFVY-WSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (431)
Q Consensus 215 ~~---~G~i~ly-~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~~~~~~~~k~vl~~s~~ 281 (431)
.. .....++ ...+...++..+++ +.........|.|.+|+.+ | +++|++|..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~s~~ 203 (322)
T d2exha2 146 HRVDHHPFYGIVLQEYSVEQKKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEG 203 (322)
T ss_dssp CCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred CccCcCCccceEEeeecCcCCeECCCcEEEEEecCCCcccCcEEEEEC--C-------------EEEEEEeCC
Confidence 21 1111122 22334456665543 2223344578999999987 5 788888764
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.21 E-value=6.9e-11 Score=115.09 Aligned_cols=123 Identities=7% Similarity=0.015 Sum_probs=93.3
Q ss_pred eCCCccceecc-cccCCCCccCCCCeEeecEEEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEc
Q 014058 104 SYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMT 182 (431)
Q Consensus 104 S~Dlv~W~~~~-~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~ 182 (431)
|++++ |++.. ++|.|.......+||.++|+. .+|+++|+|.+.+.++...+++|+|+|+ +||+|.+ .|++.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~-~~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCc-eecCCCccccCCCCcchhceeccEEEE-ECCEEEEEEEecCCCCceEEEEEEcCCc-----cCCEeCC-CCeec
Confidence 44443 54443 678887666667899998887 5999999998876667888999999996 7999875 57764
Q ss_pred CC---CCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCCCCCcEEcccc
Q 014058 183 PP---NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHP 237 (431)
Q Consensus 183 ~p---~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 237 (431)
+. ..++...++||.|+.. +++|||++.+... ..++.+++|+|+++|++.+..
T Consensus 93 p~~~~~~~~~~gv~DPrv~~~--~d~yym~yt~~~~-~~~i~lA~S~D~~~w~k~g~~ 147 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDDH-GPTIGVGMTKDFKTFVRLPNA 147 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEEE--TTEEEEEEEEESS-SEEEEEEEESSSSSEEEECCS
T ss_pred CCCCCcccccCcEEcceEEEE--CCEEEEEEEecCC-CcEEEEEEecCcchheecCCc
Confidence 32 2234567899997765 6899999987643 446789999999999988754
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.27 E-value=7.7e-06 Score=76.72 Aligned_cols=144 Identities=15% Similarity=0.221 Sum_probs=87.5
Q ss_pred ceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCcc--ceecccccCCCCccCCCCeEeecEEEccCCeEEEEEeeccC
Q 014058 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN--WIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDA 150 (431)
Q Consensus 73 ~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~--W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 150 (431)
+++++|+|||||.....+. + ....++|+|+|... |++.+..+.+....+ .....++++.++||+.+|+|.....
T Consensus 76 v~~~~g~yylyy~~~~~~~--~-~~~i~~a~s~~~~~Gpw~~~~~~~~~~~~~~-~~~iDp~vf~D~dG~~Y~~~~~~~~ 151 (291)
T d1uv4a1 76 IQYYNGKYWLYYSVSSFGS--N-TSAIGLASSTSISSGGWKDEGLVIRSTSSNN-YNAIDPELTFDKDGNPWLAFGSFWS 151 (291)
T ss_dssp EEEETTEEEEEEEECCTTC--S-CEEEEEEEESCTTTTCCEEEEEEEEECTTSS-SCCCSCEEEECTTSCEEEEECBSTT
T ss_pred EEEECCEEEEEEEecCCCC--C-cceEEEEEeCCCCCCCCCcCccccccccCCC-CCccCceEEEecCCcEEEEecccCC
Confidence 7889999999998764332 2 56789999999765 998765443333222 2345788888889999999975321
Q ss_pred CCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC----Ccc-eEEEEE
Q 014058 151 SGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID----NEG-MAFVYW 224 (431)
Q Consensus 151 ~~~~~q~lA-~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~----~~G-~i~ly~ 224 (431)
+ +.++ .+.|. ...... ...+...+. ....+.-|.++ + .+|+|||++++..- ..+ ++.+++
T Consensus 152 -~---i~i~~l~~~~-----~~~~g~-~~~i~~~~~--~~~~~EgP~i~-k-~~g~Yyl~~S~~~~~~~~~~~y~v~~~~ 217 (291)
T d1uv4a1 152 -G---IKLTKLDKST-----MKPTGS-LYSIAARPN--NGGALEAPTLT-Y-QNGYYYLMVSFDKCCDGVNSTYKIAYGR 217 (291)
T ss_dssp -C---EEEEEECTTT-----CSEEEE-EEEEECCTT--TTTCEEEEEEE-E-ETTEEEEEEEEECSSSSSCCEEEEEEEE
T ss_pred -c---eEEEeecccc-----ccCcCc-eeEEEecCC--CCccccccEEE-E-ECCEEEEEEecCcccCCCCCCceeEEEE
Confidence 2 2233 23332 111111 112332222 12344568854 5 48999999987531 111 467889
Q ss_pred eCCCCC-cEEc
Q 014058 225 SWDFIH-WTKL 234 (431)
Q Consensus 225 S~Dl~~-W~~~ 234 (431)
|+++.. |+..
T Consensus 218 s~~~~GP~~~~ 228 (291)
T d1uv4a1 218 SKSITGPYLDK 228 (291)
T ss_dssp ESSTTCCCBCT
T ss_pred cCCCCCCCccC
Confidence 998865 7643
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.91 E-value=7.6e-05 Score=70.32 Aligned_cols=128 Identities=9% Similarity=0.037 Sum_probs=84.7
Q ss_pred ceEECCEEEEEEEECCCC-CCCCCcceEEEEEeCCCccceecc--cccCCCCccCCCCeEeecEEEccCCeEEEEEeecc
Q 014058 73 PMYYKGVYHLFYQYNPLG-PLFGDKMIWAHSVSYDLINWIHLS--HALCPSGPYDINSCWSGSVTILPGDKPFILYTGID 149 (431)
Q Consensus 73 ~i~~~G~YHlFyq~~P~~-~~wg~~~~WgHa~S~Dlv~W~~~~--~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 149 (431)
++..+|++++||..+-.. ..-+......+|+|+|+++|++.+ ++|.+.........-.+.+.. ++|+++|+..+..
T Consensus 78 av~~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg~~w~k~~~npvi~~~~~~~~~~fRDP~V~~-~~g~w~M~~g~~~ 156 (294)
T d1uypa2 78 AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVLGSGK 156 (294)
T ss_dssp EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred EEecCCeEEEEEEEeeCCCCCCcceeeeEEEECCCCCceEeecCCceecCCCccCccccCCCcccc-cCCEEEEEEEeee
Confidence 345799999999764211 111214567889999999999863 455444333333456677655 5899999987655
Q ss_pred CCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 150 ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 150 ~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
.++.-...+..|+|. ++|+.. .++...+.+ ..+.-|-+ |. .+++|+|++...
T Consensus 157 ~~~~G~i~ly~S~Dl-----~~W~~~--g~l~~~~~~---~~~ECPdl-f~-l~~~~vl~~s~~ 208 (294)
T d1uypa2 157 DEKIGRVLLYTSDDL-----FHWKYE--GAIFEDETT---KEIECPDL-VR-IGEKDILIYSIT 208 (294)
T ss_dssp TTTEEEEEEEEESSS-----SSEEEE--EEEEEETTC---SCEEEEEE-EE-ETTEEEEEEEET
T ss_pred cCCccEEEEEEcCCc-----cceeEe--ccceeCCCC---CceeeceE-EE-eCCeeEEEEEec
Confidence 445556677888874 899864 366643322 35677874 44 588999998764
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=97.71 E-value=0.00012 Score=68.90 Aligned_cols=140 Identities=9% Similarity=-0.012 Sum_probs=94.3
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCCCccceecccccCCCCccCCCCeEeecEEEccCCeEEEEEeec
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 148 (431)
+|..++.++|++||+++--... .|. ..+.+.+++.+..+|+..+. | .-|+-.+.++.. +|++++-||..
T Consensus 31 N~~apf~~~Gk~~l~~RvE~rd-~~s-~s~v~lf~~~g~~~f~~~~~---p-----~~glEDPrvt~i-~g~lv~~~t~~ 99 (310)
T d2b4wa1 31 NCSVPFSYKGKTHIYGRVEKRD-IWA-ASHVRLFEETGKDEFTAVPE---L-----SWELEDPYIAKI-NNEMIFGGTRV 99 (310)
T ss_dssp SCCCCEEETTEEEEEEEEECTT-CSS-CCEEEEEEEEETTEEEECTT---C-----CBSCEEEEEEEE-TTEEEEEEEEE
T ss_pred cCCcEEEECCEEEEEEEEEccC-cce-EEEEEEEEecCCcceEECCc---c-----cccCCCCCEEeE-CCEEEEEEEEe
Confidence 4666788999999999987644 455 67788889999999987652 1 136777888774 89999999977
Q ss_pred cCCCceeEEEEEecCCCCCccceeeeecCCcEE-cCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeCCcceEEEEEeCC
Q 014058 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD 227 (431)
Q Consensus 149 ~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi-~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~~~G~i~ly~S~D 227 (431)
.. .....++|.+.+ +++|.+. .+++ ..|++ .+|=- +..-.+|+|.|+.--+..+.|.|.+..++|
T Consensus 100 ~~-~~~~~~~~~t~~-----~r~~~~~--l~~f~~gp~~-----~Kdi~-L~e~~dGKy~~ftRP~~g~~g~Ig~~~~d~ 165 (310)
T d2b4wa1 100 RK-NGNAILSYYGYF-----YRGTPDE--LTYFTRGPGC-----MKDIR-VLQLQDGRLGVFSRPRVGRKASIGFVILNS 165 (310)
T ss_dssp C------CCCEEEEE-----EEEETTE--EEEEEECCTT-----CCCCE-EEECTTSCEEEEECCCC---CCEEEEEESC
T ss_pred cC-CCCcceEEEeee-----eecchhc--CceeecCCCc-----cccEE-eEEeeCCEEEEEEccccCCCCeeEEEEeCC
Confidence 64 223444566554 3666643 3555 33332 24544 334469999999866655567888999999
Q ss_pred CCCcEE
Q 014058 228 FIHWTK 233 (431)
Q Consensus 228 l~~W~~ 233 (431)
|.+|+.
T Consensus 166 l~~~t~ 171 (310)
T d2b4wa1 166 IDELGA 171 (310)
T ss_dssp GGGCSH
T ss_pred hhhCCH
Confidence 999974
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=97.58 E-value=0.0005 Score=63.91 Aligned_cols=157 Identities=10% Similarity=0.128 Sum_probs=83.5
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeCC----CccceecccccCCCCccCCCCeEeecEEEccCCeEEEE
Q 014058 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD----LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (431)
Q Consensus 69 DPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~D----lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~l~ 144 (431)
-|. +++.+|+|||||.....+.... ....+.+++.+ ..+|++.+..+......+......+++++++||+.+++
T Consensus 66 AP~-v~~~~g~~~~~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDp~v~~d~dG~~Yl~ 143 (318)
T d1gyha_ 66 APD-IYQHKGLFYLYYSVSAFGKNTS-AIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWMS 143 (318)
T ss_dssp EEE-EEEETTEEEEEEEECCTTSCCE-EEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEEE
T ss_pred CCE-EEEEcCceEEEEEEecCCCccc-ceeEEEEeccCCCccccccccCceecccCCCCCCCceEccceEeecCCcEEEe
Confidence 344 7889999999999875443222 23334443322 46898887655433322222334677888889999999
Q ss_pred EeeccCCCceeEEEEEec-CCCCC-ccceeeee--cCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-----
Q 014058 145 YTGIDASGQQVQNLAMPE-NLSDP-LLKDWVKF--SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID----- 215 (431)
Q Consensus 145 YTg~~~~~~~~q~lA~S~-D~~d~-~l~~w~k~--~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~----- 215 (431)
|.+... .+.++... +.... ....+... ...+++..........+..|.+ ++ .+|+|||++.+...
T Consensus 144 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i-~k-~~g~yyl~yS~~~~~~~~~ 217 (318)
T d1gyha_ 144 FGSFWG----GLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFI-LR-KGDYYYLFASWGLCCRKGD 217 (318)
T ss_dssp ECBSTT----CEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEE-EE-ETTEEEEEEEESCCSCGGG
T ss_pred ccCCCC----CeeeEecCccceeeccccccccccccccceeeccCCCCCceeecCEE-EE-ECCEEEEEEecCCCCCCCc
Confidence 875431 12222221 11000 00112211 1112222222223345567885 44 48999999976431
Q ss_pred CcceEEEEEeCCCC-CcEE
Q 014058 216 NEGMAFVYWSWDFI-HWTK 233 (431)
Q Consensus 216 ~~G~i~ly~S~Dl~-~W~~ 233 (431)
....+.+++|+++. -|+.
T Consensus 218 ~~y~~~~~~s~~~~Gp~~~ 236 (318)
T d1gyha_ 218 STYHLVVGRSKQVTGPYLD 236 (318)
T ss_dssp CCCEEEEEEESSTTSCCBC
T ss_pred ccceeeeecccCCCCCccc
Confidence 12356778888775 3543
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=97.57 E-value=0.00081 Score=63.22 Aligned_cols=150 Identities=11% Similarity=0.083 Sum_probs=82.8
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCC-CCCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeE
Q 014058 64 QNWINDPNGPMYYKGVYHLFYQYNPLG-PLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKP 141 (431)
Q Consensus 64 ~gw~NDPnG~i~~~G~YHlFyq~~P~~-~~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~ 141 (431)
.+.+.-|. +.+++|+|||||...... ..+. ..+-..++|++.. .|++.. .+.. .....++++++||+.
T Consensus 68 ~~~~WAPe-v~~~~G~yylyys~~~~~~~~~~-~~~~~~~~sd~~~gp~~~~~-~~~~-------~~~dp~~f~d~dG~~ 137 (322)
T d2exha2 68 SGGVWAPH-LSYSDGKFWLIYTDVKVVEGQWK-DGHNYLVTCDTIDGAWSDPI-YLNS-------SGFDPSLFHDEDGRK 137 (322)
T ss_dssp TCBBCSCE-EEEETTEEEEEEEEECCCSSSCC-CEEEEEEEESSTTSCCCCCE-ECCC-------SCSCCEEEECTTSCE
T ss_pred cCCcccce-EEEECCEEEEEEEeecccCCCcc-ccceEEEecCCCCCCcccce-EecC-------CCCCCCeEEEcCCCE
Confidence 34456677 889999999999765432 2222 3344556666653 565432 2211 113456778889999
Q ss_pred EEEEeeccCC--CceeEEEEEe-cCCCCCccceeeeecCCcEE-cCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-CC
Q 014058 142 FILYTGIDAS--GQQVQNLAMP-ENLSDPLLKDWVKFSGNPVM-TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DN 216 (431)
Q Consensus 142 ~l~YTg~~~~--~~~~q~lA~S-~D~~d~~l~~w~k~~~~Pvi-~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-~~ 216 (431)
+++|.+.... ......+... .+. ..++.. +.|.. .... ....+..|+++ + .+|+|||+++... ..
T Consensus 138 Yl~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~--~~~~~Egp~i~-k-~~g~YYl~~s~~~~~~ 207 (322)
T d2exha2 138 YLVNMYWDHRVDHHPFYGIVLQEYSV-----EQKKLV-GEPKIIFKGT--DLRITEGPHLY-K-INGYYYLLTAEGGTRY 207 (322)
T ss_dssp EEEEEEECCCTTSCSEEEEEEEEEET-----TTTEEE-EEEEEEECCC--TTCCCEEEEEE-E-ETTEEEEEEEESCSST
T ss_pred EEEecccCCccCcCCccceEEeeecC-----cCCeEC-CCcEEEEEec--CCCcccCcEEE-E-ECCEEEEEEeCCCCCC
Confidence 9998765321 1122233322 221 122222 23333 1111 22345788854 4 4789999987643 22
Q ss_pred cceEEEEEeCCCC-CcEE
Q 014058 217 EGMAFVYWSWDFI-HWTK 233 (431)
Q Consensus 217 ~G~i~ly~S~Dl~-~W~~ 233 (431)
.-++.+++|+++. -|+.
T Consensus 208 ~y~v~~~rS~~~~GP~~~ 225 (322)
T d2exha2 208 NHAATIARSTSLYGPYEV 225 (322)
T ss_dssp TCEEEEEEESSTTCCCEE
T ss_pred CceEEEEEeCCCCccccc
Confidence 2367789999875 4654
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=97.52 E-value=0.00075 Score=63.21 Aligned_cols=149 Identities=14% Similarity=0.100 Sum_probs=84.5
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCC-CCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGP-LFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~-~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
+++.-|. +++.+|+|||||....... ... ....+.++|+|.. .|++.... . .....+++++++||+.+
T Consensus 69 ~~~WAP~-v~~~~G~~ylyy~~~~~~~~~~~-~~~~~~~~a~~p~gp~~~~~~~--~------~~~iDp~~f~D~dG~~Y 138 (317)
T d1yrza2 69 GGIWAPC-LSYHDGTFYLIYTDVKQWHGAFK-DAHNYLVTAQNIEGPWSDPIYL--N------SSGFDPSLFHDDDGRKW 138 (317)
T ss_dssp CEECSCE-EEEETTEEEEEEEEEEECSSSCC-EEEEEEEEESSSSSCCCCCEEC--C------CSCSCCEEEECTTSCEE
T ss_pred ceeecce-EEEECCEEEEEEEEeccCCCCcc-cceEEEEecCCCCCCccceeee--c------CCccCCcEEEecCCCEE
Confidence 4455676 7889999999997533211 122 4566778888875 68764321 1 11235778888899999
Q ss_pred EEEeeccCC--CceeEEEEE---ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-CC
Q 014058 143 ILYTGIDAS--GQQVQNLAM---PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DN 216 (431)
Q Consensus 143 l~YTg~~~~--~~~~q~lA~---S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-~~ 216 (431)
++|.+.... ......+.. +.+. .+-... ...+... .......-|++ ++ .+|+|||++++.. +.
T Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~---~~~~~~Egp~i-~k-~~g~yyl~~s~~~~~~ 207 (317)
T d1yrza2 139 LVNMIWDYRKGNHPFAGIILQEYSEAE-----QKLVGP-VKNIYKG---TDIQLTEGPHL-YK-KDGYYYLLVAEGGTEY 207 (317)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-----TEEEEE-EEEEECC---CTTCCCEEEEE-EE-ETTEEEEEEEESCSST
T ss_pred EEEeccCcCCCCccccceeeeecCccc-----CeEcCC-ceEEEec---cCCCcccCceE-EE-ECCEEEEEEccCCCCC
Confidence 999875431 122222222 2221 111111 0111121 12234567885 45 4899999987654 22
Q ss_pred cceEEEEEeCCCC-CcEEc
Q 014058 217 EGMAFVYWSWDFI-HWTKL 234 (431)
Q Consensus 217 ~G~i~ly~S~Dl~-~W~~~ 234 (431)
.-++.+++|+++. .|+..
T Consensus 208 ~y~v~~~~s~~~~Gp~~~~ 226 (317)
T d1yrza2 208 EHAATLARSQSIDGPYETD 226 (317)
T ss_dssp TCEEEEEEESSTTCCCEEC
T ss_pred cceEEEEEECCCCCccccC
Confidence 2357788999875 67654
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=97.50 E-value=0.00051 Score=64.12 Aligned_cols=150 Identities=13% Similarity=0.238 Sum_probs=85.1
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCcceEEEEEeC-----C-CccceecccccCCCCccCCCCeEeecEEEccCCe
Q 014058 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSY-----D-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDK 140 (431)
Q Consensus 67 ~NDPnG~i~~~G~YHlFyq~~P~~~~wg~~~~WgHa~S~-----D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~ 140 (431)
+.-|. +++.+|+|||||..+..+. + ....+.+++. + ...|++.++.+.+... +......++++.++||+
T Consensus 82 ~WAP~-v~~~~g~yyl~~t~~~~~~--~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~iD~~~f~d~dG~ 156 (312)
T d1wl7a1 82 LWAPD-ICFYNGIYYLYYSVSTFGK--N-TSVIGLATNRTLDPRDPDYEWKDMGPVIHSTAS-DNYNAIDPNVVFDQEGQ 156 (312)
T ss_dssp EEEEE-EEEETTEEEEEEEECCTTC--C-CEEEEEEEESCSCTTSTTCCCEEEEEEEEECTT-SSSCCCSCEEEECTTSC
T ss_pred eEcce-EEEeCCEEEEEEEeecCCc--c-cceeeEEEEecccCCCCccccccccceecCCCC-CCCCcCCCceeEccCCc
Confidence 33454 7889999999999876533 2 3445555432 2 2467776654443332 22345567888888999
Q ss_pred EEEEEeeccCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-----
Q 014058 141 PFILYTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI----- 214 (431)
Q Consensus 141 ~~l~YTg~~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~----- 214 (431)
.+++|.+... .+.++- +.|.. .... ....+.....+.+..-+.-|+++ + .+|+|||++++..
T Consensus 157 ~y~~~~~~~~----~i~~~~l~~d~~-----~~~~-~~~~i~~~~~~~~~~~~EgP~v~-k-~~g~yYl~ys~~~~~~~~ 224 (312)
T d1wl7a1 157 PWLSFGSFWS----GIQLIQLDTETM-----KPAA-QAELLTIASRGEEPNAIEAPFIV-C-RNGYYYLFVSFDFCCRGI 224 (312)
T ss_dssp EEEEECBSTT----CEEEEEBCTTTC-----SBCT-TCCCEEEECCSSSSCCEEEEEEE-E-ETTEEEEEEEESCCSSGG
T ss_pred EEEeecCCCC----ceeEEEEcCcCC-----cCcC-CceEEEecccCCCCCcccccEEE-E-ECCcEEEEEecCCCcCCC
Confidence 9999876431 122332 22321 1111 12233333223334456789854 4 4899999997643
Q ss_pred CCcceEEEEEeCCCCC-cEE
Q 014058 215 DNEGMAFVYWSWDFIH-WTK 233 (431)
Q Consensus 215 ~~~G~i~ly~S~Dl~~-W~~ 233 (431)
....++.+++|+++.. |+.
T Consensus 225 ~~~~~~~~a~s~~~~GP~~~ 244 (312)
T d1wl7a1 225 ESTYKIAVGRSKDITGPYVD 244 (312)
T ss_dssp GCCCEEEEEEESSTTCCCBC
T ss_pred CCCceEEEEecCCCCccccc
Confidence 1223677889988763 443
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.36 E-value=0.0028 Score=58.96 Aligned_cols=148 Identities=11% Similarity=0.051 Sum_probs=85.6
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCC-CCCCcceEEEEEeCCCc-cceecccccCCCCccCCCCeEeecEEEccCCeEE
Q 014058 65 NWINDPNGPMYYKGVYHLFYQYNPLGP-LFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (431)
Q Consensus 65 gw~NDPnG~i~~~G~YHlFyq~~P~~~-~wg~~~~WgHa~S~Dlv-~W~~~~~aL~P~~~~D~~gv~SGsav~~~dg~~~ 142 (431)
+-+.-|. +++.+|+|||||....... .+. ....+.++|++.. .|++..... .. ...++.++++||+.+
T Consensus 68 ~~~WAP~-v~~~~g~yylyys~~~~~~~~~~-~~~~~~a~a~~p~Gp~~~~~~~~--~~------~~D~~~~~d~dg~~~ 137 (321)
T d1y7ba2 68 GGIWAPD-LSYHDGKFWLIYTDVKVTDGMWK-DCHNYLTTCESVDGVWSDPITLN--GS------GFDASLFHDNDGKKY 137 (321)
T ss_dssp CEECSCE-EEEETTEEEEEEEEESCCSSSCC-CEEEEEEEESSTTSCCCCCEECC--CS------CSCCEEEECTTSCEE
T ss_pred CcccCce-EEEECCEEEEEEEeeccCCCCcc-ceeeEeeecCCCCCCcccceeec--cc------ccCCcEEEEcCCCEE
Confidence 3466777 8889999999998765432 233 5678999999874 676654321 11 134667788899999
Q ss_pred EEEeeccCC----CceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-CC
Q 014058 143 ILYTGIDAS----GQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DN 216 (431)
Q Consensus 143 l~YTg~~~~----~~~~q~lA~-S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-~~ 216 (431)
++|.+.... ......++. +.|. .+..... ..++.... ......|++ ++ .+|.|||+.+... ..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~---~~~~Egp~v-~k-~~g~yyl~~s~~~~~~ 206 (321)
T d1y7ba2 138 LVNMYWDQRTYNHNFYGIVLQEYSDKE-----KKLIGKA-KIIYKGTD---IKYTEGPHI-YH-IGDYYYLFTAEGGTTY 206 (321)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-----TEEEEEE-EEEECCCT---TCCCEEEEE-EE-ETTEEEEEEEESCSST
T ss_pred EEEeccCCCccccCccceeeEeeCCCc-----ceEcCCc-eEEeeccC---CCccccceE-EE-ECCEEEEEEcCCCCCC
Confidence 988765431 112222332 2232 2332211 12222221 223468885 45 4788888876543 22
Q ss_pred cceEEEEEeCCCC-CcEE
Q 014058 217 EGMAFVYWSWDFI-HWTK 233 (431)
Q Consensus 217 ~G~i~ly~S~Dl~-~W~~ 233 (431)
.-.+.+++|+++. -|+.
T Consensus 207 ~y~~~~~rs~~~~Gp~~~ 224 (321)
T d1y7ba2 207 EHSETVARSKNIDGPYEI 224 (321)
T ss_dssp TCEEEEEEESSTTCCCEE
T ss_pred CcceEEEEEcccCCcccc
Confidence 2357788998875 3544
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=96.44 E-value=0.032 Score=54.65 Aligned_cols=146 Identities=11% Similarity=0.129 Sum_probs=83.3
Q ss_pred ECCEEEEEEEECCCCCCCCC--cceEEEE-EeCCCccc---eecccccCCCCcc----------------CCCCeEeecE
Q 014058 76 YKGVYHLFYQYNPLGPLFGD--KMIWAHS-VSYDLINW---IHLSHALCPSGPY----------------DINSCWSGSV 133 (431)
Q Consensus 76 ~~G~YHlFyq~~P~~~~wg~--~~~WgHa-~S~Dlv~W---~~~~~aL~P~~~~----------------D~~gv~SGsa 133 (431)
.+|+++|||.-+.....-.. ...-+++ .|.+.+.| +..++.+.|++.+ |....-.+.+
T Consensus 138 ~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~v 217 (440)
T d1oyga_ 138 SDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY 217 (440)
T ss_dssp TTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEEE
T ss_pred cCCeEEEEEEeccCCCCCcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCce
Confidence 58999999986432211000 1223343 44445554 3445677777532 1123346666
Q ss_pred EEccCCeEEEEEeeccCC--C---------------------------------------ceeEEEEE-ecCCCCCccce
Q 014058 134 TILPGDKPFILYTGIDAS--G---------------------------------------QQVQNLAM-PENLSDPLLKD 171 (431)
Q Consensus 134 v~~~dg~~~l~YTg~~~~--~---------------------------------------~~~q~lA~-S~D~~d~~l~~ 171 (431)
+. ++|+.+|+|.|+... + ...++++. +.| +..
T Consensus 218 ~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D-----~~~ 291 (440)
T d1oyga_ 218 VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD-----YTL 291 (440)
T ss_dssp EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT-----SSE
T ss_pred ee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCC-----ccc
Confidence 55 589999999886431 0 01244554 333 478
Q ss_pred eeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeee-----C---Ccc-eEEEEEeCCCC-CcEE
Q 014058 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----D---NEG-MAFVYWSWDFI-HWTK 233 (431)
Q Consensus 172 w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~-----~---~~G-~i~ly~S~Dl~-~W~~ 233 (431)
|+.. .|++..... ...+..|.++. .+|+|||+..++. + ..+ .+..|.|+.+. .|+-
T Consensus 292 We~~--~pLl~a~~v--~d~~ErP~I~~--~nGKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~P 357 (440)
T d1oyga_ 292 KKVM--KPLIASNTV--TDEIERANVFK--MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKP 357 (440)
T ss_dssp EEEE--EEEEECTTT--CSCCEEEEEEE--ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEE
T ss_pred ceec--CcceeccCC--CCeEECCEEEE--ECCEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCee
Confidence 9876 478865432 34567899654 4899999987653 1 122 34567787765 4753
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=93.41 E-value=0.23 Score=44.69 Aligned_cols=102 Identities=17% Similarity=0.120 Sum_probs=61.8
Q ss_pred eE-eecEEEccCCeEEEEEeeccC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecC
Q 014058 128 CW-SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP 202 (431)
Q Consensus 128 v~-SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~ 202 (431)
+| -++++..+||.++++|.+... .....+.+..|+|+| ++|++. ..|...+.+.....+.+|.++....
T Consensus 20 ~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~~~~~~~~~~~~~~v~~~~ 93 (356)
T d1w8oa3 20 NYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQTTAPIKGFSDPSYLVDRE 93 (356)
T ss_dssp CEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCBCSSSCBEEEEEEEEECTT
T ss_pred eeEeCEEEEECCCCEEEEEeeeeCCCCCCCCceEEEEEccCCC----CCCCCC--EEeecCCCCCcccccccceEEEeCC
Confidence 45 477777779999999977432 134456778999986 799752 2233333222234567888666656
Q ss_pred CCeEEEEEeeeeC---------------CcceEEEEEeCC-CCCcEEcc
Q 014058 203 DGRWRVLVGGQID---------------NEGMAFVYWSWD-FIHWTKLD 235 (431)
Q Consensus 203 ~g~~~M~~ga~~~---------------~~G~i~ly~S~D-l~~W~~~~ 235 (431)
+|.-+++...... ....+.+++|+| ...|+...
T Consensus 94 ~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~ 142 (356)
T d1w8oa3 94 TGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (356)
T ss_dssp TCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CCeEEEEEeeeccCCcccccccCCCCCCcEEEEEEEecCCccccccccc
Confidence 6765544432210 012466777755 58998753
|
| >d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Trypanosoma sialidase species: Parasitic flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]
Probab=87.79 E-value=4.1 Score=38.13 Aligned_cols=83 Identities=13% Similarity=0.076 Sum_probs=45.3
Q ss_pred EEccCCeEEEEEeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeee
Q 014058 134 TILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (431)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~ 213 (431)
+...+|++++=..+....+...-.+.+|+|.| ++|+..+ ++-. .....|.|. . .||+-+|....
T Consensus 183 i~~~~GrLv~p~~~~~~~~~~~s~~iySdD~G----~TW~~g~--~~~~-------~~~~~~~v~-~-~dG~lll~~R~- 246 (399)
T d2ah2a2 183 IVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFGK--GRSA-------FGCSEPVAL-E-WEGKLIINTRV- 246 (399)
T ss_dssp EECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEECS--CCCC-------TTCEEEEEE-E-ETTEEEEEEEC-
T ss_pred eeecCccEecceEeecCCCceEEEEEEeCCCC----ceeEecc--ccCC-------CCcccccee-c-cCCeEEEEEec-
Confidence 44578887753222222233444466898876 7998642 2211 112345543 2 47886666532
Q ss_pred eCCcceEEEEEeCC-CCCcEEc
Q 014058 214 IDNEGMAFVYWSWD-FIHWTKL 234 (431)
Q Consensus 214 ~~~~G~i~ly~S~D-l~~W~~~ 234 (431)
..|...+|+|.| +..|+..
T Consensus 247 --~~g~r~v~~S~DgG~TW~~~ 266 (399)
T d2ah2a2 247 --DYRRRLVYESSDMGNTWLEA 266 (399)
T ss_dssp --TTSCCCEEEESSTTSSCEEC
T ss_pred --CCCceeEEEEcCCCcccccc
Confidence 234444677766 4899864
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=87.35 E-value=2.9 Score=38.28 Aligned_cols=76 Identities=14% Similarity=0.090 Sum_probs=46.6
Q ss_pred eE-eecEEEccCCeEEEEEeeccC---C-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecC
Q 014058 128 CW-SGSVTILPGDKPFILYTGIDA---S-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAP 202 (431)
Q Consensus 128 v~-SGsav~~~dg~~~l~YTg~~~---~-~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~ 202 (431)
+| .++.+...+|.+.+++.+... + ..-.+.++.|+|+| ++|++. ..|...+.......+.||..++...
T Consensus 32 ~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgG----kTWs~~--~~i~~~~~~~~~~~~~~p~~v~~~~ 105 (379)
T d3sila_ 32 YFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGG----KTWNKK--IAIYNDRVNSKLSRVMDPTCIVANI 105 (379)
T ss_dssp EEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSS----SCCEEE--EEECCCCSCTTTCEEEEEEEEEEEE
T ss_pred eEeccEEEEECCCcEEEEEeeEECCCCCCCCceEEEEEecCCc----cCCCCC--EEccCCCCCccccccCCccEEEECC
Confidence 45 577776789999999876432 1 22334567889986 899874 2333322222335677998777666
Q ss_pred CCeEEEE
Q 014058 203 DGRWRVL 209 (431)
Q Consensus 203 ~g~~~M~ 209 (431)
+|.-+++
T Consensus 106 ~g~~~~~ 112 (379)
T d3sila_ 106 QGRETIL 112 (379)
T ss_dssp TTEEEEE
T ss_pred CCCEEEE
Confidence 7765433
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=85.95 E-value=0.18 Score=46.62 Aligned_cols=93 Identities=11% Similarity=-0.032 Sum_probs=56.9
Q ss_pred CCeEeecEEEccCCeEEEEEeeccCCCce--eEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCC
Q 014058 126 NSCWSGSVTILPGDKPFILYTGIDASGQQ--VQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD 203 (431)
Q Consensus 126 ~gv~SGsav~~~dg~~~l~YTg~~~~~~~--~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~ 203 (431)
.-||-.+|....+|+.+|++---.++... ...++.+++. .+|+..+ .|+. ...||+|.+. +
T Consensus 27 ~DVyN~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~-----~~f~~~~-~p~~---------glEDPrvt~i--~ 89 (310)
T d2b4wa1 27 YDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGK-----DEFTAVP-ELSW---------ELEDPYIAKI--N 89 (310)
T ss_dssp CEEESCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEET-----TEEEECT-TCCB---------SCEEEEEEEE--T
T ss_pred cceecCCcEEEECCEEEEEEEEEccCcceEEEEEEEEecCC-----cceEECC-cccc---------cCCCCCEEeE--C
Confidence 33888888544699999999754443323 3334444432 4676653 4553 4569997664 7
Q ss_pred CeEEEEEeeeeCCcceEEEEEeCCCCCcEEcc
Q 014058 204 GRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD 235 (431)
Q Consensus 204 g~~~M~~ga~~~~~G~i~ly~S~Dl~~W~~~~ 235 (431)
|+|+|-..+.....+.+.+|++.|++.|+...
T Consensus 90 g~lv~~~t~~~~~~~~~~~~~t~~~r~~~~~l 121 (310)
T d2b4wa1 90 NEMIFGGTRVRKNGNAILSYYGYFYRGTPDEL 121 (310)
T ss_dssp TEEEEEEEEEC-----CCCEEEEEEEEETTEE
T ss_pred CEEEEEEEEecCCCCcceEEEeeeeecchhcC
Confidence 88887655444334556688888888886443
|
| >d1w0pa3 b.68.1.1 (A:217-346,A:544-777) Vibrio cholerae sialidase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Vibrio cholerae sialidase species: Vibrio cholerae [TaxId: 666]
Probab=84.60 E-value=8.2 Score=34.22 Aligned_cols=150 Identities=13% Similarity=-0.016 Sum_probs=76.1
Q ss_pred CCEEEEEEEECCCCCCCCC---cceEEEEEeCC-CccceecccccCCCCccCCCCeEeecEEEccC-CeEEEEEeeccCC
Q 014058 77 KGVYHLFYQYNPLGPLFGD---KMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPG-DKPFILYTGIDAS 151 (431)
Q Consensus 77 ~G~YHlFyq~~P~~~~wg~---~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~~d-g~~~l~YTg~~~~ 151 (431)
+|+.-.|+...+.+...+. .+.+...+|+| ..+|+............+......++++++.+ +.++++|+.....
T Consensus 19 ~g~~~a~~~~r~~~~~~~~~~~~~di~~~RS~DgGkTWs~~~~i~~~~~~~~~~~~~~p~~~~d~~~~~i~~~~~~~~~~ 98 (364)
T d1w0pa3 19 PGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPIYDPSSNTVLVSYARWPTD 98 (364)
T ss_dssp TTCEEEEEEEEETCSSTTCTTCEEEEEEEEESSSSSSCCCCEESSGGGCTTSCEEEEEEEEEEETTTTEEEEEEEEEETT
T ss_pred CCEEEEEEeeeeCCCCCcccCCcceEEEEEeCCCCcCCCCCEEeecCCCCCCcccccCCeEEEECCCCeEEEEEEecCCC
Confidence 6788778776665543321 34577888999 59999754333222222333445566666554 5677777653210
Q ss_pred -----------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeEEEEEeeeeC-Ccce
Q 014058 152 -----------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGM 219 (431)
Q Consensus 152 -----------~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~~M~~ga~~~-~~G~ 219 (431)
....+....|.|.+ .+|.+.. ++..+............+ ...+|.+++-...... ..+.
T Consensus 99 ~~~~~~~~~~~~~~g~~~~~s~d~g----~tw~~~~---~~~~~~~~~~~~~~~~~~--~~~~G~~~~~~~~~~~~~~~~ 169 (364)
T d1w0pa3 99 AAQNGDRIKPWMPNGIFYSVYDVAS----GNWQAPI---VNPGPGHGITLTRQQNIS--GSQNGRLIYPAIVLDRFFLNV 169 (364)
T ss_dssp CCSGGGCCCTTSCCEEEEEEEETTT----TEECCCE---EECCSSCCEECCCCTTST--TCCTTCEEEEEEEESSSCEEE
T ss_pred CCcccccccccccCcEEEEecCCCC----Ccccccc---cccccceeeeecCCCccc--cccCCeEEEEEEeecCCCCce
Confidence 11223445677765 6887531 222111100011111111 1236777655443332 2333
Q ss_pred EEEEEeCCCCCcEEcc
Q 014058 220 AFVYWSWDFIHWTKLD 235 (431)
Q Consensus 220 i~ly~S~Dl~~W~~~~ 235 (431)
..++..++...|+...
T Consensus 170 ~~~~s~d~g~tw~~~~ 185 (364)
T d1w0pa3 170 MSIYSDDGGSNWQTGS 185 (364)
T ss_dssp EEEEESSSSSSCEECC
T ss_pred eEEEeccCCcEEEecc
Confidence 4455556778998754
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=83.25 E-value=14 Score=33.30 Aligned_cols=149 Identities=11% Similarity=0.014 Sum_probs=69.4
Q ss_pred ccCCCcceE-ECCEEEEEEEECC---CCC---------CCCCcceEEEEEeCC-CccceecccccC----CCCccCCCCe
Q 014058 67 INDPNGPMY-YKGVYHLFYQYNP---LGP---------LFGDKMIWAHSVSYD-LINWIHLSHALC----PSGPYDINSC 128 (431)
Q Consensus 67 ~NDPnG~i~-~~G~YHlFyq~~P---~~~---------~wg~~~~WgHa~S~D-lv~W~~~~~aL~----P~~~~D~~gv 128 (431)
..||..++- .+|.-.+|+.... ... ... ........|.| ..+|........ +...+.....
T Consensus 95 ~~~p~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~S~D~g~tw~~p~~~~~~~~~~~~~~~~~~~ 173 (379)
T d3sila_ 95 VMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDT-DWDLVLYKSTDDGVTFSKVETNIHDIVTKNGTISAMLG 173 (379)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCT-TCEEEEEEESSTTSCCEEECCSHHHHHHHHCSEEEEEE
T ss_pred cCCccEEEECCCCCEEEEEEEEecCCCCCccccccccCCCC-ceeEEEEecCccccccccCccccccccccccceeeecc
Confidence 357764333 4788877775422 111 111 34455566665 589987532110 1111111111
Q ss_pred EeecEEEccCCeEEEE--EeeccCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEEecCCCeE
Q 014058 129 WSGSVTILPGDKPFIL--YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRW 206 (431)
Q Consensus 129 ~SGsav~~~dg~~~l~--YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~~Pvi~~p~~~~~~~~RDP~Vv~~~~~g~~ 206 (431)
-.|+.+...+|+++.- +............+.++.|.+ .+|..... +.. .....|.++-. +|..
T Consensus 174 g~g~gi~~~~g~l~~p~~~~~~~~~~~~~~~~~~~sddg----g~w~~~~~-~~~--------~~~~E~~vve~--dG~l 238 (379)
T d3sila_ 174 GVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTDG----ITWSLPSG-YCE--------GFGSENNIIEF--NASL 238 (379)
T ss_dssp CSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESSS----SSEECCSC-CEE--------CTTCCEEEEEE--TTEE
T ss_pred CccceEeecccceeeeEEEEecCCCCccEEEEEEEcCCC----Ccceeeec-ccC--------CCCCCCEEEec--CCcE
Confidence 2334455567765432 221111222333334443433 45654321 111 22357886533 7876
Q ss_pred EEEEeeeeCCcceEEEEEeCC-CCCcEEcc
Q 014058 207 RVLVGGQIDNEGMAFVYWSWD-FIHWTKLD 235 (431)
Q Consensus 207 ~M~~ga~~~~~G~i~ly~S~D-l~~W~~~~ 235 (431)
+|..-. .|...+|+|.| +..|+...
T Consensus 239 l~~~R~----~g~~~v~~S~DgG~TWse~~ 264 (379)
T d3sila_ 239 VNNIRN----SGLRRSFETKDFGKTWTEFP 264 (379)
T ss_dssp EEEECC----SSBCBCEEESSSSSCCEECT
T ss_pred EEEEEc----CCceEEEEEcCCCccccccc
Confidence 665432 23345788887 69999753
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=80.39 E-value=7.1 Score=34.04 Aligned_cols=98 Identities=14% Similarity=0.011 Sum_probs=61.5
Q ss_pred ceEE-CCEEEEEEEECCCCC-CCCCcceEEEEEeCC-CccceecccccCCCCccCCCCeEeecEEEc-cCCeEEEEEeec
Q 014058 73 PMYY-KGVYHLFYQYNPLGP-LFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTIL-PGDKPFILYTGI 148 (431)
Q Consensus 73 ~i~~-~G~YHlFyq~~P~~~-~wg~~~~WgHa~S~D-lv~W~~~~~aL~P~~~~D~~gv~SGsav~~-~dg~~~l~YTg~ 148 (431)
+++- +|+.-++|.....+. .++ .....-..|+| ..+|+.................-....+++ .+|+++++|...
T Consensus 26 lv~~~~G~lla~~~~r~~~~~d~~-~~~i~~~rS~D~G~TWs~~~~v~~~~~~~~~~~~~~~~~v~~~~~g~i~l~~~~~ 104 (356)
T d1w8oa3 26 LTVTPDGDLLASYDGRPTGIGAPG-PNSILQRRSTDGGRTWGEQQVVSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYS 104 (356)
T ss_dssp EEECTTSCEEEEEEECTTSCSTTS-CCEEEEEEESSTTSSCCCCEEEECCBCSSSCBEEEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEECCCCEEEEEeeeeCCCCCCC-CceEEEEEccCCCCCCCCCEEeecCCCCCcccccccceEEEeCCCCeEEEEEeee
Confidence 5664 688888886554432 345 67788889999 589998654333322222234445555665 367888888754
Q ss_pred cCC--------------CceeEEEEEecCCCCCccceeeee
Q 014058 149 DAS--------------GQQVQNLAMPENLSDPLLKDWVKF 175 (431)
Q Consensus 149 ~~~--------------~~~~q~lA~S~D~~d~~l~~w~k~ 175 (431)
... ......+..|.|++ .+|.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~~ 141 (356)
T d1w8oa3 105 QRQGFAGSRPGTDPADPNVLHANVATSTDGG----LTWSHR 141 (356)
T ss_dssp SSCCTTTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEE
T ss_pred ccCCcccccccCCCCCCcEEEEEEEecCCcc----cccccc
Confidence 321 12346688899876 799874
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=80.36 E-value=17 Score=32.97 Aligned_cols=41 Identities=12% Similarity=0.194 Sum_probs=28.3
Q ss_pred eecEEEccCCeEEEEEeeccCC---CceeEEEEEecCCCCCccceeeee
Q 014058 130 SGSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKF 175 (431)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~ 175 (431)
..+.++..+|+++|||--+... +...-++|+|+|. ++|+..
T Consensus 22 DPnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~DL-----v~W~~~ 65 (353)
T d1y4wa2 22 DPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDL-----THWEEK 65 (353)
T ss_dssp EEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSS-----SSCEEE
T ss_pred CCccceEECCEEEEEEecCCCCCCCCCeEEEEEEeccc-----cceeEC
Confidence 3444444699999999744221 3344689999995 899975
|