Citrus Sinensis ID: 014155

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
MAQVSKICNGIQNTRVFTNQTKLQKPKSVSAISFRSQSRGCSSSWGLRYNDRLGNNNTVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFVAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDGMV
ccccccHHcccccccccccccccccccccccccccccccccccHHHHHccccccccccccEEEEEccccccccccccccEEEcccccEEEEEEccccHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHcccEEEEEccccEEEEEccccccccccccccccEEEccccHHHHHHHHHHHHHccccEEEEEEcccHHcccccHHHHHHHHHcccCEEEccccccccEEECccccccccEEEEcccccHHHHHHHHHHHHccccccEEEEccccccccHHHHHHHHHHHcccCEEEccccccEEEccccCEEccccEECcccccHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHcccEEEECccEEEEEccccccccccccccEEEcccccccHHHHHHHHHHHccccEEEEcccc
*******CNGIQNTRVFTNQTK**********************WGLRYNDR**************************EIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFVAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDGMV
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MAQVSKICNGIQNTRVFTNQTKLQKPKSVSAISFRSQSRGCSSSWGLRYNDRLGNNNTVRTVRASASVGTAEKQSKASEIVLQPIREISGTVTLPGSKSLSNRILLLAALSEGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFVAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDGMV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic confidentP05466
3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic probableP10748
3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic probableP11043

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable
2.5.1.193-phosphoshikimate 1-carboxyvinyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NVS, chain A
Confidence level:very confident
Coverage over the Query: 77-428
View the alignment between query and template
View the model in PyMOL