Citrus Sinensis ID: 014192


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
MKAHAADLNGRTKLQIENTPKMVLLLAIILSLLTVIPLCLDTRRSPLSSARINVGELRSMVLEKHCDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYMLKIERQRAVVEKLIRNA
cccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHcccccccccccccEEEccccEEEEEEEcccEEEEEEEccccccccccccccccccccEEEEcccccHHHHHHHccccEEEEEccccccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcc
ccEEEEEEcccccEEccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEcccEEccccccccccccccccccccccHHccccccHHcEEEEcccccccccccHHHHHHHHcccEEEEEcccHcHHHHHHHHHHHHHHccccccEEEcccEEEEccccEEEEEEccccEEEEEEEccEEEEcccccccccccccEEEEEEcccHHHHHHHcccccEEEEEccEEEccccEEEEccEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccccccccccHHHHccHHHHHHHHHHHHHHccccEEEEEcHHHHHcccccccccccccccccccccccEEccccccccHHHHHHHHHHHHccccccHHHHHHcc
mkahaadlngrtklqienTPKMVLLLAIILSLLTVIplcldtrrsplssarinVGELRSMVLEKHcdifsgewvpnpkgpyysnescRLIIdqqncmkfgrpdtefmnwrwkphecelplfnpvqfLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMlqeanpedishkytsetdyfKRWYYTEYKFTVAtlwspflvkssdadpnghsanNLMNLYLDEADESWVSQIENFDYVIISAGQwffrplvyyangqpvgchncninnmTALTKYHAYRMAFRTAFRTLQRLKnykgitflrtfspshfengdwdkggncgrtrpftsqeveldgYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEImllrpdghpnqyghsmhknktvndcvhwclpgpidtWNEFLFYMLKIERQRAVVEKLIRNA
mkahaadlngrtklqientPKMVLLLAIILSLLTVIPLCLDtrrsplssarinvgelrSMVLEKHCDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRtfspshfengdwdkggncgRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYMLKIERQRAVVEKLIRNA
MKAHAADLNGRTKLQIENTPKMVlllaiilsllTVIPLCLDTRRSPLSSARINVGELRSMVLEKHCDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYMLKIERQRAVVEKLIRNA
***************IENTPKMVLLLAIILSLLTVIPLCLDTRRSPLSSARINVGELRSMVLEKHCDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVK***********NNLMNLYLDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYMLKIERQRAVVEKL****
****************ENTPKMVLLLAIILSLLTVIPLCL**************************DIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSD******S*NNLMNLYLDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHF***DWD*GGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYG***HKNKTVNDCVHWCLPGPIDTWNEFLFY******************
********NGRTKLQIENTPKMVLLLAIILSLLTVIPLCLDTRRSPLSSARINVGELRSMVLEKHCDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYMLKIERQRAVVEKLIRNA
MKAHAADLNGRTKLQIENTPKMVLLLAIILSLLTVIPLCLDT*********************KHCDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYMLKIER************
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooo
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKAHAADLNGRTKLQIENTPKMVLLLAIILSLLTVIPLCLDTRRSPLSSARINVGELRSMVLEKHCDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYMLKIERQRAVVEKLIRNA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
224127360347 predicted protein [Populus trichocarpa] 0.806 0.997 0.754 1e-163
224079906368 predicted protein [Populus trichocarpa] 0.841 0.980 0.723 1e-162
359488346386 PREDICTED: uncharacterized protein LOC10 0.885 0.984 0.683 1e-162
298204394 795 unnamed protein product [Vitis vinifera] 0.855 0.461 0.698 1e-161
255586642329 conserved hypothetical protein [Ricinus 0.766 1.0 0.741 1e-152
356573887432 PREDICTED: uncharacterized protein LOC10 0.811 0.805 0.654 1e-145
356545647432 PREDICTED: uncharacterized protein LOC10 0.932 0.925 0.596 1e-145
255636826432 unknown [Glycine max] 0.811 0.805 0.651 1e-145
224079910441 hypothetical protein POPTRDRAFT_1076074 0.937 0.911 0.566 1e-139
356567170 562 PREDICTED: uncharacterized protein LOC10 0.813 0.620 0.625 1e-139
>gi|224127360|ref|XP_002329258.1| predicted protein [Populus trichocarpa] gi|222870712|gb|EEF07843.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 264/350 (75%), Positives = 301/350 (86%), Gaps = 4/350 (1%)

Query: 64  KHCDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNP 123
           K CDIFSG+W+P P GPYY++ +C LIIDQ NCMKFGRPDTEFM WRW+P +CELP FN 
Sbjct: 2   KECDIFSGKWIPYPNGPYYTDATCSLIIDQHNCMKFGRPDTEFMKWRWRPEKCELPFFNA 61

Query: 124 VQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYY 183
            QFLE+VRGK +AFVGDSVGRNQM+SLLCLL+S      +PEDISH+YT++T YFKRW+Y
Sbjct: 62  KQFLELVRGKMMAFVGDSVGRNQMQSLLCLLSSV----THPEDISHRYTADTTYFKRWFY 117

Query: 184 TEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVIISAGQW 243
            +Y FT+ATLWSPFLVKS DADPNGHS N+LM+LYLD+ADE+W SQIENFDYVIISAGQW
Sbjct: 118 ADYGFTLATLWSPFLVKSRDADPNGHSLNSLMSLYLDQADEAWASQIENFDYVIISAGQW 177

Query: 244 FFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFS 303
           FFRPL+YY NGQ VGCHNC + N+TA+TKY+ YRMAFRTAF TL+RLKNYKGITFLRTFS
Sbjct: 178 FFRPLIYYINGQIVGCHNCYMENITAVTKYYGYRMAFRTAFETLRRLKNYKGITFLRTFS 237

Query: 304 PSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLL 363
           PSHFENG W++GGNC RT PFTS+E++ DGY +EFYLTQVEELR A+K+G   GLKF LL
Sbjct: 238 PSHFENGAWNEGGNCIRTMPFTSEEMKFDGYYLEFYLTQVEELRKAQKEGRKGGLKFELL 297

Query: 364 DTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYML 413
            TTE MLLRPDGHPN YG S H N TV DCVHWCLPGPIDTWNEFL YM+
Sbjct: 298 ATTEAMLLRPDGHPNYYGRSPHSNVTVADCVHWCLPGPIDTWNEFLLYMM 347




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079906|ref|XP_002305967.1| predicted protein [Populus trichocarpa] gi|222848931|gb|EEE86478.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359488346|ref|XP_002279418.2| PREDICTED: uncharacterized protein LOC100261795 [Vitis vinifera] Back     alignment and taxonomy information
>gi|298204394|emb|CBI16874.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255586642|ref|XP_002533952.1| conserved hypothetical protein [Ricinus communis] gi|223526083|gb|EEF28438.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356573887|ref|XP_003555087.1| PREDICTED: uncharacterized protein LOC100777436 [Glycine max] Back     alignment and taxonomy information
>gi|356545647|ref|XP_003541248.1| PREDICTED: uncharacterized protein LOC100815059 [Glycine max] Back     alignment and taxonomy information
>gi|255636826|gb|ACU18746.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|224079910|ref|XP_002305969.1| hypothetical protein POPTRDRAFT_1076074 [Populus trichocarpa] gi|222848933|gb|EEE86480.1| hypothetical protein POPTRDRAFT_1076074 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356567170|ref|XP_003551794.1| PREDICTED: uncharacterized protein LOC100784342 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query429
TAIR|locus:2146077426 TBL19 "AT5G15900" [Arabidopsis 0.869 0.875 0.520 1.5e-108
TAIR|locus:2146062526 TBL21 "AT5G15890" [Arabidopsis 0.792 0.646 0.511 1.1e-101
TAIR|locus:2091388414 TBL22 "AT3G28150" [Arabidopsis 0.839 0.869 0.421 6.9e-86
TAIR|locus:2035342456 TBL25 "AT1G01430" [Arabidopsis 0.855 0.804 0.427 3.1e-83
TAIR|locus:2128489430 TBL24 "AT4G23790" [Arabidopsis 0.787 0.786 0.416 1.6e-77
TAIR|locus:2136113432 TBL23 "AT4G11090" [Arabidopsis 0.790 0.784 0.418 3.4e-77
TAIR|locus:2125048442 TBL26 "AT4G01080" [Arabidopsis 0.792 0.769 0.411 7.1e-77
TAIR|locus:2076909373 TBL20 "AT3G02440" [Arabidopsis 0.587 0.675 0.523 7.3e-75
TAIR|locus:2020628416 TBL27 "TRICHOME BIREFRINGENCE- 0.783 0.807 0.379 1.9e-67
TAIR|locus:2153077501 YLS7 "AT5G51640" [Arabidopsis 0.825 0.706 0.358 1.2e-65
TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
 Identities = 204/392 (52%), Positives = 269/392 (68%)

Query:    43 RRSPLSSARINVGELRSMVLEKH--CDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFG 100
             ++ P  S+ IN   L + V+  H  CDIFSGEWVPNP+ PYY+N +C  I + QNCMKFG
Sbjct:    45 QQPPSQSSIIN---LENGVVTSHDSCDIFSGEWVPNPEAPYYTNTTCWAIHEHQNCMKFG 101

Query:   101 RPDTEFMNWRWKPHECE--LPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYM 158
             RPDT+F+ W+WKP+ CE  LP+F+PV+FLEIVRGK++AFVGDSV RN M+SL+CLL+   
Sbjct:   102 RPDTDFIKWKWKPYGCEDGLPVFDPVRFLEIVRGKTMAFVGDSVSRNHMQSLICLLS--- 158

Query:   159 LQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLY 218
              Q   P D S K     DYFKRW Y  Y FT+A  W+P LVKS + D       ++ +LY
Sbjct:   159 -QVEYPMDASVK---NDDYFKRWTYETYNFTIAAFWTPHLVKSKEPDQTQPKHIDIFDLY 214

Query:   219 LDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRM 278
             LDEADESW + I +FD+VIIS+G W +RP VYY N    GCH C + N+T LT ++ YR 
Sbjct:   215 LDEADESWTADIGDFDFVIISSGHWHYRPSVYYENRTITGCHYCQLPNITDLTMFYGYRK 274

Query:   279 AFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEF 338
             AFRTAF+ +   +++KG+ +LR+F+PSHFE G W++GG+C R +P+ S E + D  TM+ 
Sbjct:   275 AFRTAFKAILDSESFKGVMYLRSFAPSHFEGGLWNEGGDCLRKQPYRSNETQ-DETTMKL 333

Query:   339 YLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTV-NDCVHWC 397
             +  Q+EE   AE++    G +  LLDTT+ M LRPDGHP++YGH    N T+ NDCVHWC
Sbjct:   334 HKIQLEEFWRAEEEAKKKGKRLRLLDTTQAMWLRPDGHPSRYGHIPEANVTLYNDCVHWC 393

Query:   398 LPGPIDTWNEFLFYMLKIERQR---AVVEKLI 426
             LPGPID  N+FL  MLK E  +   A V K++
Sbjct:   394 LPGPIDNLNDFLLAMLKREEDKGFLAQVRKML 425




GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076909 TBL20 "AT3G02440" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.123.119.1
hypothetical protein (347 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 5e-85
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 7e-45
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 8e-27
>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
 Score =  260 bits (667), Expect = 5e-85
 Identities = 105/298 (35%), Positives = 136/298 (45%), Gaps = 30/298 (10%)

Query: 118 LPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDY 177
           LP F+  QFLE +RGK + FVGDS+ RNQ ESL+C     +L +  P     K       
Sbjct: 1   LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVC-----LLSQVEPPK--GKTLERDGR 53

Query: 178 FKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVI 237
             R+ + +Y  T+   WSPFLV+S +A+           L LD  DE W       D ++
Sbjct: 54  LFRFRFKDYNVTIEFYWSPFLVESDNAE------EGKRVLKLDSIDEKWSKLWPGADVLV 107

Query: 238 ISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRT-LQRLKNYKGI 296
            ++G W+    VY       G   C  +N   +    AYR A  T  +     L   K  
Sbjct: 108 FNSGHWWLHRKVYI------GWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTR 161

Query: 297 TFLRTFSPSHFENGDWDKGGNCGRTRPFTSQE-VELDGYTMEFYLTQVEELRAAEKQGMD 355
            F RTFSP HFE G+W+ GG+C  T P    E   L    ++      E L  A      
Sbjct: 162 VFFRTFSPVHFEGGEWNTGGSCYETEPLLGSEYKGLTPEMID---IVNEVLSRAA----- 213

Query: 356 MGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYML 413
           M     LLD T +   R DGHP+ Y       K   DC+HWCLPG  DTWNE L  +L
Sbjct: 214 MKTPVKLLDITLLSQYRKDGHPSVYRKPGPPKKE-QDCLHWCLPGVPDTWNELLLALL 270


The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270

>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 429
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.91
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.07
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 92.5
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 91.53
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=2.4e-105  Score=810.73  Aligned_cols=323  Identities=31%  Similarity=0.638  Sum_probs=269.9

Q ss_pred             CCCCCcCcccceeeCCCCCCcCCCCCC-CcccccccccCCCCCCccccceeecCCCCCCCCCHHHHHHHHhCCceEEeec
Q 014192           62 LEKHCDIFSGEWVPNPKGPYYSNESCR-LIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGD  140 (429)
Q Consensus        62 ~~~~Cd~f~G~WV~d~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~y~~w~W~P~~C~l~~f~~~~~l~~lr~k~~~fvGD  140 (429)
                      ..++||+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||+||+.+||+.||||+|+||||
T Consensus        49 ~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGD  128 (387)
T PLN02629         49 NQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGD  128 (387)
T ss_pred             CccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEecc
Confidence            357899999999999999999999999 9999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhhcccccCCCCcccccccCCCcceeEEEEeeccEEEEEEecccccccCCCCCCCCCCCceeEEeec
Q 014192          141 SVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLD  220 (429)
Q Consensus       141 S~~R~~~~sl~clL~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~n~Tv~f~wsPfLv~~~~~~~~~~~~~~~~~l~lD  220 (429)
                      |++|||||||+|||++    ++ |.........++  +++|+|++||+||+||||||||+.+...       +...|+||
T Consensus       129 SL~RNQ~eSLvClL~~----~~-p~~~~~~~~~~~--~~~~~F~~yN~TV~~ywspfLV~~~~~~-------~~~~l~LD  194 (387)
T PLN02629        129 SLGRNQWESLICLISS----SV-PSTRTQMSRGDP--LSTFKFLDYGVSISFYKAPYLVDIDAVQ-------GKRVLKLE  194 (387)
T ss_pred             ccchhHHHHHHHHhhc----cC-CCCceeeecCCc--eEEEEeccCCEEEEEEecceEEeeecCC-------CceeEEec
Confidence            9999999999999998    33 433222213344  7899999999999999999999976542       22347888


Q ss_pred             ccchhhhhccCCccEEEEcccccccccceEeeCCceeccccC--CCCCCccccHHHHHHHHHHHHHHHHH-hcCCCCcEE
Q 014192          221 EADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNC--NINNMTALTKYHAYRMAFRTAFRTLQ-RLKNYKGIT  297 (429)
Q Consensus       221 ~~~~~W~~~~~~~DvlV~ntG~Ww~r~~~~~~~g~~vg~~~~--~~~~~~~~~~~~Ayr~al~t~~~wv~-~~~~~kt~V  297 (429)
                      +++. +++.+.++|||||||||||.++      +..+||+++  ...++++|++.+||++||+||++||+ ++++.+++|
T Consensus       195 ~id~-~a~~w~~~DvlVfntghWw~~~------~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~v  267 (387)
T PLN02629        195 EISG-NANAWRDADVLIFNTGHWWSHQ------GSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRV  267 (387)
T ss_pred             Ccch-hhhhhccCCEEEEeCccccCCC------CeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence            7664 3666777999999999999986      345677666  34568999999999999999999995 578889999


Q ss_pred             EEEecCCCCCCCCCCCCCC-----CCC-ccccCCCCccccCCcchHhHHHHHHHHHHHHHhcccCCccEEEeecchhhcc
Q 014192          298 FLRTFSPSHFENGDWDKGG-----NCG-RTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLL  371 (429)
Q Consensus       298 ffRt~SP~Hf~~g~Wn~Gg-----~C~-~t~P~~~~~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~v~lLDIT~lS~~  371 (429)
                      ||||+||+||+||+||+||     +|+ +|+|+.++++ .++...+++  ++|++.+      .++.+|+|||||+||++
T Consensus       268 ffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~-~~~~~~~~~--~ve~v~~------~~~~~v~lLDIT~ls~l  338 (387)
T PLN02629        268 FFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTY-PGAYPDQMR--VVDEVIR------GMHNPAYLLDITLLSEL  338 (387)
T ss_pred             EEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccc-cCcchHHHH--HHHHHHH------hcCCceEEEechhhhhc
Confidence            9999999999999999875     587 7899985443 344444444  4444443      24578999999999999


Q ss_pred             CCCCCCCCCCCCC--C--CCCCC-CCeeecccCCcchhHHHHHHHHHH
Q 014192          372 RPDGHPNQYGHSM--H--KNKTV-NDCVHWCLPGPIDTWNEFLFYMLK  414 (429)
Q Consensus       372 RpDgHps~y~~~~--~--~~~~~-~DClHWCLPGvpDtWNelL~~~L~  414 (429)
                      |||||||+|++..  .  .++.. +||+||||||||||||||||++|+
T Consensus       339 R~DgHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~  386 (387)
T PLN02629        339 RKDGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF  386 (387)
T ss_pred             CCCCCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence            9999999997541  1  22233 999999999999999999999986



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query429
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 44.8 bits (105), Expect = 5e-05
 Identities = 69/463 (14%), Positives = 126/463 (27%), Gaps = 162/463 (34%)

Query: 18  NTPKMVLLLAIILSLLTVIPLCLDTRRSPLSSARINVGELRSMVLEKHCDIFSGEWVPNP 77
           N+P+   +L ++  LL  I     +R    S+ ++ +  +++ +      +   +   N 
Sbjct: 193 NSPE--TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR----RLLKSKPYEN- 245

Query: 78  KGPYYSNESCRLIIDQ-QNCMKFGRPDTEFMNWRWKP--HECELPLF-----NPVQFLEI 129
                    C L++   QN               W      C++ L          FL  
Sbjct: 246 ---------CLLVLLNVQN------------AKAWNAFNLSCKI-LLTTRFKQVTDFLSA 283

Query: 130 VRGKSLAFVGDSVGRNQMESLLCLLASYM------L-QEA---NPEDIS------HKYTS 173
                ++    S+     E    LL  Y+      L +E    NP  +S          +
Sbjct: 284 ATTTHISLDHHSMTLTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342

Query: 174 ETDYFKRWYYTEYKFTVATLWSPFLVKSS--DADPNGHSANNLMNLYLDEA--DES---- 225
             D +K  +    K T         ++SS    +P          ++   +    S    
Sbjct: 343 TWDNWK--HVNCDKLTTI-------IESSLNVLEPA-----EYRKMFDRLSVFPPSAHIP 388

Query: 226 -------WVSQIENFDYVIIS-------AGQWFFRPLVYYANGQPVGCHN------CNIN 265
                  W   I++   V+++         +      +           +        + 
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI--------PSIYLELKVKLE 440

Query: 266 NMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFT 325
           N  AL   H          R++  + +Y      +TF          D            
Sbjct: 441 NEYAL---H----------RSI--VDHYN---IPKTFDS-------DDLIPPY------- 468

Query: 326 SQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMH 385
                LD Y   FY      L+  E        +   LD       R             
Sbjct: 469 -----LDQY---FYSHIGHHLKNIEHPERMTLFRMVFLD------FR-----------FL 503

Query: 386 KNKTVNDCVHWCLPGPI-DTWNEFLFYMLKIERQRAVVEKLIR 427
           + K  +D   W   G I +T  +  FY   I       E+L+ 
Sbjct: 504 EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 94.07
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=94.07  E-value=0.4  Score=42.33  Aligned_cols=51  Identities=16%  Similarity=0.269  Sum_probs=35.7

Q ss_pred             CCccEEEEcccccccccceEeeCCceeccccCCCCCCccccHHHHHHHHHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 014192          231 ENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSH  306 (429)
Q Consensus       231 ~~~DvlV~ntG~Ww~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ayr~al~t~~~wv~~~~~~kt~VffRt~SP~H  306 (429)
                      ..+|+|||+.|..=.          .              ...+.|+..++++++.+... ..+++++|-+..|..
T Consensus        73 ~~pd~Vvi~~G~ND~----------~--------------~~~~~~~~~l~~ii~~l~~~-~p~~~ii~~~~~P~~  123 (200)
T 4h08_A           73 TKFDVIHFNNGLHGF----------D--------------YTEEEYDKSFPKLIKIIRKY-APKAKLIWANTTPVR  123 (200)
T ss_dssp             SCCSEEEECCCSSCT----------T--------------SCHHHHHHHHHHHHHHHHHH-CTTCEEEEECCCCCE
T ss_pred             CCCCeEEEEeeeCCC----------C--------------CCHHHHHHHHHHHHHHHhhh-CCCccEEEeccCCCc
Confidence            458999999885410          0              12467889999998887653 345678888888865




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query429
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 95.16
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein Lp3323
species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.16  E-value=0.047  Score=45.88  Aligned_cols=13  Identities=38%  Similarity=0.478  Sum_probs=11.6

Q ss_pred             hCCceEEeechhh
Q 014192          131 RGKSLAFVGDSVG  143 (429)
Q Consensus       131 r~k~~~fvGDS~~  143 (429)
                      ..|||+|+|||++
T Consensus         3 ~~kri~~iGDSit   15 (207)
T d3dc7a1           3 SFKRPAWLGDSIT   15 (207)
T ss_dssp             CCSSEEEEESTTT
T ss_pred             CCCEEEEEehHhh
Confidence            4689999999997