Citrus Sinensis ID: 014192
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 429 | ||||||
| 224127360 | 347 | predicted protein [Populus trichocarpa] | 0.806 | 0.997 | 0.754 | 1e-163 | |
| 224079906 | 368 | predicted protein [Populus trichocarpa] | 0.841 | 0.980 | 0.723 | 1e-162 | |
| 359488346 | 386 | PREDICTED: uncharacterized protein LOC10 | 0.885 | 0.984 | 0.683 | 1e-162 | |
| 298204394 | 795 | unnamed protein product [Vitis vinifera] | 0.855 | 0.461 | 0.698 | 1e-161 | |
| 255586642 | 329 | conserved hypothetical protein [Ricinus | 0.766 | 1.0 | 0.741 | 1e-152 | |
| 356573887 | 432 | PREDICTED: uncharacterized protein LOC10 | 0.811 | 0.805 | 0.654 | 1e-145 | |
| 356545647 | 432 | PREDICTED: uncharacterized protein LOC10 | 0.932 | 0.925 | 0.596 | 1e-145 | |
| 255636826 | 432 | unknown [Glycine max] | 0.811 | 0.805 | 0.651 | 1e-145 | |
| 224079910 | 441 | hypothetical protein POPTRDRAFT_1076074 | 0.937 | 0.911 | 0.566 | 1e-139 | |
| 356567170 | 562 | PREDICTED: uncharacterized protein LOC10 | 0.813 | 0.620 | 0.625 | 1e-139 |
| >gi|224127360|ref|XP_002329258.1| predicted protein [Populus trichocarpa] gi|222870712|gb|EEF07843.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 264/350 (75%), Positives = 301/350 (86%), Gaps = 4/350 (1%)
Query: 64 KHCDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNP 123
K CDIFSG+W+P P GPYY++ +C LIIDQ NCMKFGRPDTEFM WRW+P +CELP FN
Sbjct: 2 KECDIFSGKWIPYPNGPYYTDATCSLIIDQHNCMKFGRPDTEFMKWRWRPEKCELPFFNA 61
Query: 124 VQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYY 183
QFLE+VRGK +AFVGDSVGRNQM+SLLCLL+S +PEDISH+YT++T YFKRW+Y
Sbjct: 62 KQFLELVRGKMMAFVGDSVGRNQMQSLLCLLSSV----THPEDISHRYTADTTYFKRWFY 117
Query: 184 TEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVIISAGQW 243
+Y FT+ATLWSPFLVKS DADPNGHS N+LM+LYLD+ADE+W SQIENFDYVIISAGQW
Sbjct: 118 ADYGFTLATLWSPFLVKSRDADPNGHSLNSLMSLYLDQADEAWASQIENFDYVIISAGQW 177
Query: 244 FFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFS 303
FFRPL+YY NGQ VGCHNC + N+TA+TKY+ YRMAFRTAF TL+RLKNYKGITFLRTFS
Sbjct: 178 FFRPLIYYINGQIVGCHNCYMENITAVTKYYGYRMAFRTAFETLRRLKNYKGITFLRTFS 237
Query: 304 PSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLL 363
PSHFENG W++GGNC RT PFTS+E++ DGY +EFYLTQVEELR A+K+G GLKF LL
Sbjct: 238 PSHFENGAWNEGGNCIRTMPFTSEEMKFDGYYLEFYLTQVEELRKAQKEGRKGGLKFELL 297
Query: 364 DTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYML 413
TTE MLLRPDGHPN YG S H N TV DCVHWCLPGPIDTWNEFL YM+
Sbjct: 298 ATTEAMLLRPDGHPNYYGRSPHSNVTVADCVHWCLPGPIDTWNEFLLYMM 347
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224079906|ref|XP_002305967.1| predicted protein [Populus trichocarpa] gi|222848931|gb|EEE86478.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359488346|ref|XP_002279418.2| PREDICTED: uncharacterized protein LOC100261795 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|298204394|emb|CBI16874.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255586642|ref|XP_002533952.1| conserved hypothetical protein [Ricinus communis] gi|223526083|gb|EEF28438.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356573887|ref|XP_003555087.1| PREDICTED: uncharacterized protein LOC100777436 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356545647|ref|XP_003541248.1| PREDICTED: uncharacterized protein LOC100815059 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255636826|gb|ACU18746.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224079910|ref|XP_002305969.1| hypothetical protein POPTRDRAFT_1076074 [Populus trichocarpa] gi|222848933|gb|EEE86480.1| hypothetical protein POPTRDRAFT_1076074 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356567170|ref|XP_003551794.1| PREDICTED: uncharacterized protein LOC100784342 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 429 | ||||||
| TAIR|locus:2146077 | 426 | TBL19 "AT5G15900" [Arabidopsis | 0.869 | 0.875 | 0.520 | 1.5e-108 | |
| TAIR|locus:2146062 | 526 | TBL21 "AT5G15890" [Arabidopsis | 0.792 | 0.646 | 0.511 | 1.1e-101 | |
| TAIR|locus:2091388 | 414 | TBL22 "AT3G28150" [Arabidopsis | 0.839 | 0.869 | 0.421 | 6.9e-86 | |
| TAIR|locus:2035342 | 456 | TBL25 "AT1G01430" [Arabidopsis | 0.855 | 0.804 | 0.427 | 3.1e-83 | |
| TAIR|locus:2128489 | 430 | TBL24 "AT4G23790" [Arabidopsis | 0.787 | 0.786 | 0.416 | 1.6e-77 | |
| TAIR|locus:2136113 | 432 | TBL23 "AT4G11090" [Arabidopsis | 0.790 | 0.784 | 0.418 | 3.4e-77 | |
| TAIR|locus:2125048 | 442 | TBL26 "AT4G01080" [Arabidopsis | 0.792 | 0.769 | 0.411 | 7.1e-77 | |
| TAIR|locus:2076909 | 373 | TBL20 "AT3G02440" [Arabidopsis | 0.587 | 0.675 | 0.523 | 7.3e-75 | |
| TAIR|locus:2020628 | 416 | TBL27 "TRICHOME BIREFRINGENCE- | 0.783 | 0.807 | 0.379 | 1.9e-67 | |
| TAIR|locus:2153077 | 501 | YLS7 "AT5G51640" [Arabidopsis | 0.825 | 0.706 | 0.358 | 1.2e-65 |
| TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 204/392 (52%), Positives = 269/392 (68%)
Query: 43 RRSPLSSARINVGELRSMVLEKH--CDIFSGEWVPNPKGPYYSNESCRLIIDQQNCMKFG 100
++ P S+ IN L + V+ H CDIFSGEWVPNP+ PYY+N +C I + QNCMKFG
Sbjct: 45 QQPPSQSSIIN---LENGVVTSHDSCDIFSGEWVPNPEAPYYTNTTCWAIHEHQNCMKFG 101
Query: 101 RPDTEFMNWRWKPHECE--LPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYM 158
RPDT+F+ W+WKP+ CE LP+F+PV+FLEIVRGK++AFVGDSV RN M+SL+CLL+
Sbjct: 102 RPDTDFIKWKWKPYGCEDGLPVFDPVRFLEIVRGKTMAFVGDSVSRNHMQSLICLLS--- 158
Query: 159 LQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLY 218
Q P D S K DYFKRW Y Y FT+A W+P LVKS + D ++ +LY
Sbjct: 159 -QVEYPMDASVK---NDDYFKRWTYETYNFTIAAFWTPHLVKSKEPDQTQPKHIDIFDLY 214
Query: 219 LDEADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRM 278
LDEADESW + I +FD+VIIS+G W +RP VYY N GCH C + N+T LT ++ YR
Sbjct: 215 LDEADESWTADIGDFDFVIISSGHWHYRPSVYYENRTITGCHYCQLPNITDLTMFYGYRK 274
Query: 279 AFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFTSQEVELDGYTMEF 338
AFRTAF+ + +++KG+ +LR+F+PSHFE G W++GG+C R +P+ S E + D TM+
Sbjct: 275 AFRTAFKAILDSESFKGVMYLRSFAPSHFEGGLWNEGGDCLRKQPYRSNETQ-DETTMKL 333
Query: 339 YLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTV-NDCVHWC 397
+ Q+EE AE++ G + LLDTT+ M LRPDGHP++YGH N T+ NDCVHWC
Sbjct: 334 HKIQLEEFWRAEEEAKKKGKRLRLLDTTQAMWLRPDGHPSRYGHIPEANVTLYNDCVHWC 393
Query: 398 LPGPIDTWNEFLFYMLKIERQR---AVVEKLI 426
LPGPID N+FL MLK E + A V K++
Sbjct: 394 LPGPIDNLNDFLLAMLKREEDKGFLAQVRKML 425
|
|
| TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2076909 TBL20 "AT3G02440" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.123.119.1 | hypothetical protein (347 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 429 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 5e-85 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 7e-45 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 8e-27 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 260 bits (667), Expect = 5e-85
Identities = 105/298 (35%), Positives = 136/298 (45%), Gaps = 30/298 (10%)
Query: 118 LPLFNPVQFLEIVRGKSLAFVGDSVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDY 177
LP F+ QFLE +RGK + FVGDS+ RNQ ESL+C +L + P K
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVC-----LLSQVEPPK--GKTLERDGR 53
Query: 178 FKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLDEADESWVSQIENFDYVI 237
R+ + +Y T+ WSPFLV+S +A+ L LD DE W D ++
Sbjct: 54 LFRFRFKDYNVTIEFYWSPFLVESDNAE------EGKRVLKLDSIDEKWSKLWPGADVLV 107
Query: 238 ISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRT-LQRLKNYKGI 296
++G W+ VY G C +N + AYR A T + L K
Sbjct: 108 FNSGHWWLHRKVYI------GWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTR 161
Query: 297 TFLRTFSPSHFENGDWDKGGNCGRTRPFTSQE-VELDGYTMEFYLTQVEELRAAEKQGMD 355
F RTFSP HFE G+W+ GG+C T P E L ++ E L A
Sbjct: 162 VFFRTFSPVHFEGGEWNTGGSCYETEPLLGSEYKGLTPEMID---IVNEVLSRAA----- 213
Query: 356 MGLKFSLLDTTEIMLLRPDGHPNQYGHSMHKNKTVNDCVHWCLPGPIDTWNEFLFYML 413
M LLD T + R DGHP+ Y K DC+HWCLPG DTWNE L +L
Sbjct: 214 MKTPVKLLDITLLSQYRKDGHPSVYRKPGPPKKE-QDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 429 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.91 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.07 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 92.5 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 91.53 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-105 Score=810.73 Aligned_cols=323 Identities=31% Similarity=0.638 Sum_probs=269.9
Q ss_pred CCCCCcCcccceeeCCCCCCcCCCCCC-CcccccccccCCCCCCccccceeecCCCCCCCCCHHHHHHHHhCCceEEeec
Q 014192 62 LEKHCDIFSGEWVPNPKGPYYSNESCR-LIIDQQNCMKFGRPDTEFMNWRWKPHECELPLFNPVQFLEIVRGKSLAFVGD 140 (429)
Q Consensus 62 ~~~~Cd~f~G~WV~d~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~y~~w~W~P~~C~l~~f~~~~~l~~lr~k~~~fvGD 140 (429)
..++||+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||+||+.+||+.||||+|+||||
T Consensus 49 ~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGD 128 (387)
T PLN02629 49 NQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGD 128 (387)
T ss_pred CccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEecc
Confidence 357899999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhcccccCCCCcccccccCCCcceeEEEEeeccEEEEEEecccccccCCCCCCCCCCCceeEEeec
Q 014192 141 SVGRNQMESLLCLLASYMLQEANPEDISHKYTSETDYFKRWYYTEYKFTVATLWSPFLVKSSDADPNGHSANNLMNLYLD 220 (429)
Q Consensus 141 S~~R~~~~sl~clL~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~n~Tv~f~wsPfLv~~~~~~~~~~~~~~~~~l~lD 220 (429)
|++|||||||+|||++ ++ |.........++ +++|+|++||+||+||||||||+.+... +...|+||
T Consensus 129 SL~RNQ~eSLvClL~~----~~-p~~~~~~~~~~~--~~~~~F~~yN~TV~~ywspfLV~~~~~~-------~~~~l~LD 194 (387)
T PLN02629 129 SLGRNQWESLICLISS----SV-PSTRTQMSRGDP--LSTFKFLDYGVSISFYKAPYLVDIDAVQ-------GKRVLKLE 194 (387)
T ss_pred ccchhHHHHHHHHhhc----cC-CCCceeeecCCc--eEEEEeccCCEEEEEEecceEEeeecCC-------CceeEEec
Confidence 9999999999999998 33 433222213344 7899999999999999999999976542 22347888
Q ss_pred ccchhhhhccCCccEEEEcccccccccceEeeCCceeccccC--CCCCCccccHHHHHHHHHHHHHHHHH-hcCCCCcEE
Q 014192 221 EADESWVSQIENFDYVIISAGQWFFRPLVYYANGQPVGCHNC--NINNMTALTKYHAYRMAFRTAFRTLQ-RLKNYKGIT 297 (429)
Q Consensus 221 ~~~~~W~~~~~~~DvlV~ntG~Ww~r~~~~~~~g~~vg~~~~--~~~~~~~~~~~~Ayr~al~t~~~wv~-~~~~~kt~V 297 (429)
+++. +++.+.++|||||||||||.++ +..+||+++ ...++++|++.+||++||+||++||+ ++++.+++|
T Consensus 195 ~id~-~a~~w~~~DvlVfntghWw~~~------~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~v 267 (387)
T PLN02629 195 EISG-NANAWRDADVLIFNTGHWWSHQ------GSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRV 267 (387)
T ss_pred Ccch-hhhhhccCCEEEEeCccccCCC------CeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 7664 3666777999999999999986 345677666 34568999999999999999999995 578889999
Q ss_pred EEEecCCCCCCCCCCCCCC-----CCC-ccccCCCCccccCCcchHhHHHHHHHHHHHHHhcccCCccEEEeecchhhcc
Q 014192 298 FLRTFSPSHFENGDWDKGG-----NCG-RTRPFTSQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLL 371 (429)
Q Consensus 298 ffRt~SP~Hf~~g~Wn~Gg-----~C~-~t~P~~~~~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~v~lLDIT~lS~~ 371 (429)
||||+||+||+||+||+|| +|+ +|+|+.++++ .++...+++ ++|++.+ .++.+|+|||||+||++
T Consensus 268 ffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~-~~~~~~~~~--~ve~v~~------~~~~~v~lLDIT~ls~l 338 (387)
T PLN02629 268 FFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTY-PGAYPDQMR--VVDEVIR------GMHNPAYLLDITLLSEL 338 (387)
T ss_pred EEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccc-cCcchHHHH--HHHHHHH------hcCCceEEEechhhhhc
Confidence 9999999999999999875 587 7899985443 344444444 4444443 24578999999999999
Q ss_pred CCCCCCCCCCCCC--C--CCCCC-CCeeecccCCcchhHHHHHHHHHH
Q 014192 372 RPDGHPNQYGHSM--H--KNKTV-NDCVHWCLPGPIDTWNEFLFYMLK 414 (429)
Q Consensus 372 RpDgHps~y~~~~--~--~~~~~-~DClHWCLPGvpDtWNelL~~~L~ 414 (429)
|||||||+|++.. . .++.. +||+||||||||||||||||++|+
T Consensus 339 R~DgHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 339 RKDGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred CCCCCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 9999999997541 1 22233 999999999999999999999986
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 429 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 5e-05
Identities = 69/463 (14%), Positives = 126/463 (27%), Gaps = 162/463 (34%)
Query: 18 NTPKMVLLLAIILSLLTVIPLCLDTRRSPLSSARINVGELRSMVLEKHCDIFSGEWVPNP 77
N+P+ +L ++ LL I +R S+ ++ + +++ + + + N
Sbjct: 193 NSPE--TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR----RLLKSKPYEN- 245
Query: 78 KGPYYSNESCRLIIDQ-QNCMKFGRPDTEFMNWRWKP--HECELPLF-----NPVQFLEI 129
C L++ QN W C++ L FL
Sbjct: 246 ---------CLLVLLNVQN------------AKAWNAFNLSCKI-LLTTRFKQVTDFLSA 283
Query: 130 VRGKSLAFVGDSVGRNQMESLLCLLASYM------L-QEA---NPEDIS------HKYTS 173
++ S+ E LL Y+ L +E NP +S +
Sbjct: 284 ATTTHISLDHHSMTLTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342
Query: 174 ETDYFKRWYYTEYKFTVATLWSPFLVKSS--DADPNGHSANNLMNLYLDEA--DES---- 225
D +K + K T ++SS +P ++ + S
Sbjct: 343 TWDNWK--HVNCDKLTTI-------IESSLNVLEPA-----EYRKMFDRLSVFPPSAHIP 388
Query: 226 -------WVSQIENFDYVIIS-------AGQWFFRPLVYYANGQPVGCHN------CNIN 265
W I++ V+++ + + + +
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI--------PSIYLELKVKLE 440
Query: 266 NMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSHFENGDWDKGGNCGRTRPFT 325
N AL H R++ + +Y +TF D
Sbjct: 441 NEYAL---H----------RSI--VDHYN---IPKTFDS-------DDLIPPY------- 468
Query: 326 SQEVELDGYTMEFYLTQVEELRAAEKQGMDMGLKFSLLDTTEIMLLRPDGHPNQYGHSMH 385
LD Y FY L+ E + LD R
Sbjct: 469 -----LDQY---FYSHIGHHLKNIEHPERMTLFRMVFLD------FR-----------FL 503
Query: 386 KNKTVNDCVHWCLPGPI-DTWNEFLFYMLKIERQRAVVEKLIR 427
+ K +D W G I +T + FY I E+L+
Sbjct: 504 EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 429 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 94.07 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=94.07 E-value=0.4 Score=42.33 Aligned_cols=51 Identities=16% Similarity=0.269 Sum_probs=35.7
Q ss_pred CCccEEEEcccccccccceEeeCCceeccccCCCCCCccccHHHHHHHHHHHHHHHHHhcCCCCcEEEEEecCCCC
Q 014192 231 ENFDYVIISAGQWFFRPLVYYANGQPVGCHNCNINNMTALTKYHAYRMAFRTAFRTLQRLKNYKGITFLRTFSPSH 306 (429)
Q Consensus 231 ~~~DvlV~ntG~Ww~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ayr~al~t~~~wv~~~~~~kt~VffRt~SP~H 306 (429)
..+|+|||+.|..=. . ...+.|+..++++++.+... ..+++++|-+..|..
T Consensus 73 ~~pd~Vvi~~G~ND~----------~--------------~~~~~~~~~l~~ii~~l~~~-~p~~~ii~~~~~P~~ 123 (200)
T 4h08_A 73 TKFDVIHFNNGLHGF----------D--------------YTEEEYDKSFPKLIKIIRKY-APKAKLIWANTTPVR 123 (200)
T ss_dssp SCCSEEEECCCSSCT----------T--------------SCHHHHHHHHHHHHHHHHHH-CTTCEEEEECCCCCE
T ss_pred CCCCeEEEEeeeCCC----------C--------------CCHHHHHHHHHHHHHHHhhh-CCCccEEEeccCCCc
Confidence 458999999885410 0 12467889999998887653 345678888888865
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 429 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 95.16 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.16 E-value=0.047 Score=45.88 Aligned_cols=13 Identities=38% Similarity=0.478 Sum_probs=11.6
Q ss_pred hCCceEEeechhh
Q 014192 131 RGKSLAFVGDSVG 143 (429)
Q Consensus 131 r~k~~~fvGDS~~ 143 (429)
..|||+|+|||++
T Consensus 3 ~~kri~~iGDSit 15 (207)
T d3dc7a1 3 SFKRPAWLGDSIT 15 (207)
T ss_dssp CCSSEEEEESTTT
T ss_pred CCCEEEEEehHhh
Confidence 4689999999997
|