Citrus Sinensis ID: 014220
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 428 | 2.2.26 [Sep-21-2011] | |||||||
| Q43866 | 584 | Beta-fructofuranosidase, | yes | no | 0.908 | 0.666 | 0.717 | 1e-168 | |
| Q43089 | 555 | Beta-fructofuranosidase, | N/A | no | 0.929 | 0.717 | 0.661 | 1e-156 | |
| Q9LIB9 | 572 | Beta-fructofuranosidase, | no | no | 0.927 | 0.694 | 0.630 | 1e-147 | |
| Q67XZ3 | 594 | Beta-fructofuranosidase, | no | no | 0.908 | 0.654 | 0.621 | 1e-145 | |
| P26792 | 592 | Beta-fructofuranosidase, | N/A | no | 0.922 | 0.667 | 0.625 | 1e-145 | |
| Q70XE6 | 606 | Fructan 6-exohydrolase OS | N/A | no | 0.911 | 0.643 | 0.588 | 1e-140 | |
| Q39692 | 592 | Beta-fructofuranosidase, | N/A | no | 0.927 | 0.670 | 0.597 | 1e-137 | |
| Q0JDC6 | 586 | Beta-fructofuranosidase, | yes | no | 0.920 | 0.672 | 0.599 | 1e-137 | |
| Q01IS8 | 586 | Beta-fructofuranosidase, | N/A | no | 0.920 | 0.672 | 0.599 | 1e-137 | |
| Q8W413 | 591 | Beta-fructofuranosidase, | no | no | 0.908 | 0.658 | 0.581 | 1e-134 |
| >sp|Q43866|INV1_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV1 OS=Arabidopsis thaliana GN=CWINV1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust.
Identities = 284/396 (71%), Positives = 328/396 (82%), Gaps = 7/396 (1%)
Query: 16 LGHGVVELQASHHVYRNL-QTSQSTSP--NQPYRTGYHFQPPKNWINDPNGVMIYKGIYH 72
+G+ VV L+ASHHVY+ L Q++ + SP NQPYRTG+HFQPPKNW+NDPNG MIYKGIYH
Sbjct: 19 IGNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYH 78
Query: 73 LFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132
LFYQ+NPKGAVWGNIVWAHSTS DLINW PH PAI+PS DINGCWSGSATILP KP
Sbjct: 79 LFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPV 138
Query: 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL 192
I YTGIDP N+QVQN+A PKNLSDPYLREW KSP NPLMAPDA+N IN SSFRDPTTAWL
Sbjct: 139 ILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWL 198
Query: 193 GPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGL 252
G DK+WRVIIGSKI+R+GLAI Y SKDF+ W K+ PLH G+GMWECPDFFPV+ +G
Sbjct: 199 GQDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGS 258
Query: 253 NGLDTSDMG-PNT--KHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDY 309
NG++TS G PN KHVLK+SLDDTKH+YYT+GTY KD++VPD G + R+DY
Sbjct: 259 NGVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDY 318
Query: 310 GKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWP 369
GKYYASKTFFD AKNRR+LWGW NESSSV DDV+KGW+GIQ IPRK+WLD+SGK L+QWP
Sbjct: 319 GKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWP 378
Query: 370 VVEIEKLRVNQVQ-VPSKLLKGGSVIEVTGVTAAQV 404
V E+E+LR QV+ + +K+LK GS +EV GVTAAQ
Sbjct: 379 VREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQA 414
|
Beta-fructofuranosidase that can use sucrose and 1-kestose, and, to a lower extent, neokestose and levan, as substrates, but not inuline. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme OS=Pisum sativum GN=BFRUCT1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/405 (66%), Positives = 318/405 (78%), Gaps = 7/405 (1%)
Query: 6 LSLFLFFALFLGHGVVELQASHHVYRNLQT----SQSTSPNQPYRTGYHFQPPKNWINDP 61
+S +LF V+ ++A+HHVY+ L+T S S +QPYRT YHFQP KNWINDP
Sbjct: 3 ISSIFLLSLFSLIYVIPIEATHHVYQTLETLSSHHSSKSNHQPYRTAYHFQPLKNWINDP 62
Query: 62 NGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSG 121
NG M Y G YHLFYQYNPKGAVWGNIVWAHS SKDL+NW P D AI+PSQ SDI GCWSG
Sbjct: 63 NGPMRYGGFYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIHPSQPSDIKGCWSG 122
Query: 122 SATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINT 181
SATILPG KPAI YTGIDP+N QVQN+A+PKN+SDP LREW KSPKNPLM P N+IN+
Sbjct: 123 SATILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPLLREWKKSPKNPLMEPTIANKINS 182
Query: 182 SSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWEC 241
SSFRDPTT+WLG D WRV+IGSKI+ KG+AILY+SK+FV W++AKHPLHS +GTGMWEC
Sbjct: 183 SSFRDPTTSWLGKDGFWRVLIGSKIDTKGMAILYKSKNFVDWVEAKHPLHSAEGTGMWEC 242
Query: 242 PDFFPVSTYGL--NGLDTSDMG-PNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGS 298
PDF+PV L G+DTS G + +HVLKVSLDDTKH++Y +G+Y KD +VP+ G
Sbjct: 243 PDFYPVLDKNLLRTGVDTSRNGDDDVRHVLKVSLDDTKHDHYLIGSYDVVKDVFVPENGF 302
Query: 299 VESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWL 358
++ LR+DYGKYYASKTFFD KNRR+L GWVNESSSV DDVKKGW+GI IPR++WL
Sbjct: 303 EDNGFVLRYDYGKYYASKTFFDDGKNRRILLGWVNESSSVADDVKKGWSGIHTIPREIWL 362
Query: 359 DKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQ 403
+SGK LVQWPV EIE LR+N V P+K++KGG I +TGV + Q
Sbjct: 363 HESGKQLVQWPVKEIENLRMNPVNWPTKVIKGGERISITGVDSVQ 407
|
Pisum sativum (taxid: 3888) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q9LIB9|INV5_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV5 OS=Arabidopsis thaliana GN=CWINV5 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 520 bits (1339), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/411 (63%), Positives = 305/411 (74%), Gaps = 14/411 (3%)
Query: 1 MANFY---LSLFLFFALFL-GHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKN 56
MAN +++FL +LFL VV L A +V N++ NQPYRTGYHFQPPKN
Sbjct: 1 MANIVWCNIAMFLLVSLFLTDDAVVVLDALDNVPNNIK-------NQPYRTGYHFQPPKN 53
Query: 57 WINDPNGVMIYKGIYHLFYQYNPKGAVW--GNIVWAHSTSKDLINWIPHDPAIYPSQQSD 114
W+NDPNG MIYKGIYHLFYQ+N GAV VW H+TS DLINWI PAI PS+ SD
Sbjct: 54 WMNDPNGPMIYKGIYHLFYQWNQNGAVMDVNKTVWGHATSTDLINWITLSPAIRPSRPSD 113
Query: 115 INGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD 174
INGCWSGS TILP KP I YTG D +NRQVQNL PKNL+DPYLR W KSP+NPL+ P
Sbjct: 114 INGCWSGSVTILPNGKPVILYTGNDRYNRQVQNLVKPKNLTDPYLRHWTKSPENPLVTPS 173
Query: 175 AMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK 234
+N IN+S+FRDPTTAW G D RWR+ GS+ R+GLAIL+ SKDFV W ++ PLH
Sbjct: 174 PVNHINSSAFRDPTTAWFGRDGRWRITTGSQEGRRGLAILHTSKDFVIWKQSPKPLHYHD 233
Query: 235 GTGMWECPDFFPVSTYGLNGLDTS-DMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYV 293
GTGMWECPDFFPV+ GLDTS GP KHVLKVSL DT ++YYT+GTY +D YV
Sbjct: 234 GTGMWECPDFFPVARTDSRGLDTSFSSGPMVKHVLKVSLTDTFNDYYTIGTYDEVRDVYV 293
Query: 294 PDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIP 353
PD+G V+ ++ R+DYGK+YASKTF+D RR+LWGWVNESS D++KKGWAG+QAIP
Sbjct: 294 PDKGFVQDETAPRYDYGKFYASKTFYDSVNQRRILWGWVNESSPEKDNIKKGWAGLQAIP 353
Query: 354 RKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
RK+WLD+SGK LVQWPV EIE+LR QV+ +KLLKGGSV+EV GVTA Q
Sbjct: 354 RKVWLDESGKRLVQWPVKEIERLRTTQVKWGNKLLKGGSVMEVHGVTAPQA 404
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q67XZ3|INV3_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV3 OS=Arabidopsis thaliana GN=CWINV3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 516 bits (1328), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/402 (62%), Positives = 298/402 (74%), Gaps = 13/402 (3%)
Query: 6 LSLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVM 65
+ L L ++FL + + +L+AS H NQPYRTGYHFQP KNW+NDPNG M
Sbjct: 9 IGLSLLLSMFLANFITDLEASSH----------QDLNQPYRTGYHFQPLKNWMNDPNGPM 58
Query: 66 IYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSAT 124
IYKGIYHLFYQYNP GAVW IVW HSTS DL+NWI PA PSQ SDINGCWSGS T
Sbjct: 59 IYKGIYHLFYQYNPYGAVWDVRIVWGHSTSVDLVNWISQPPAFNPSQPSDINGCWSGSVT 118
Query: 125 ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSF 184
ILP KP I YTGID + QVQN+AVP N+SDPYLREW K P+NPLM +A+N IN F
Sbjct: 119 ILPNGKPVILYTGIDQNKGQVQNVAVPVNISDPYLREWSKPPQNPLMTTNAVNGINPDRF 178
Query: 185 RDPTTAWLGPDKRWRVIIGSKIN-RKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPD 243
RDPTTAWLG D WRVI+GS + R+GLAILY+S+DF +W ++ PLH TGMWECPD
Sbjct: 179 RDPTTAWLGRDGEWRVIVGSSTDDRRGLAILYKSRDFFNWTQSMKPLHYEDLTGMWECPD 238
Query: 244 FFPVSTYGLNGLDTSDMGPN-TKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESD 302
FFPVS G +G++TS +G N KHVLKVSL +T H+YYT+G+Y KD YVPD G V+++
Sbjct: 239 FFPVSITGSDGVETSSVGENGIKHVLKVSLIETLHDYYTIGSYDREKDVYVPDLGFVQNE 298
Query: 303 SGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362
S R DYGKYYASKTF+D K RR+LWGWVNESS DD++KGW+G+Q+ PRK+WLD+SG
Sbjct: 299 SAPRLDYGKYYASKTFYDDVKKRRILWGWVNESSPAKDDIEKGWSGLQSFPRKIWLDESG 358
Query: 363 KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
K L+QWP+ EIE LR QV K+LK GS ++V GVTAAQ
Sbjct: 359 KELLQWPIEEIETLRGQQVNWQKKVLKAGSTLQVHGVTAAQA 400
|
6-fructan exohydrolase that can use phlein, levan, neokestose, levanbiose, 6-kestose, and 1-kestose as substrates. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 8 EC: 0 |
| >sp|P26792|INV1_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 1 OS=Daucus carota GN=INV1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 514 bits (1323), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/401 (62%), Positives = 299/401 (74%), Gaps = 6/401 (1%)
Query: 23 LQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGA 82
++A H ++ NLQ+ + + Q +RTGYHFQP +NWINDPNG M YKG+YHLFYQYNPKGA
Sbjct: 37 VEAFHEIHYNLQSVGAENVKQVHRTGYHFQPKQNWINDPNGPMYYKGVYHLFYQYNPKGA 96
Query: 83 VWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGI---D 139
VWGNIVWAHS S DLINW P +PAI+PS+ D GC SGSATILPG KP I YTGI
Sbjct: 97 VWGNIVWAHSVSTDLINWTPLEPAIFPSKPFDKYGCRSGSATILPGNKPVILYTGIVEGP 156
Query: 140 PHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWR 199
P N QVQN A+P NLSDPYLR+W+K NPL+ A N N ++FRDPTTAWL W+
Sbjct: 157 PKNVQVQNYAIPANLSDPYLRKWIKPDNNPLVV--ANNGENATAFRDPTTAWLDKSGHWK 214
Query: 200 VIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSD 259
+++GSK NR+G+A LYRSKDF+ W KAKHP+HS TGMWECPDFFPVS GLNGLDTS
Sbjct: 215 MLVGSKRNRRGIAYLYRSKDFIKWTKAKHPIHSQANTGMWECPDFFPVSLKGLNGLDTSV 274
Query: 260 MGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFF 319
G + KHVLKVSLD T++EYYTVGTY T KDRY+PD SV+ +GLR+DYG +YASKTFF
Sbjct: 275 TGESVKHVLKVSLDLTRYEYYTVGTYLTDKDRYIPDNTSVDGWAGLRYDYGNFYASKTFF 334
Query: 320 DGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVN 379
D +KNRR+LWGW NES S DV KGWAGIQ IPR LWLD SGK L+QWP+ E+E LR +
Sbjct: 335 DPSKNRRILWGWANESDSTAHDVAKGWAGIQLIPRTLWLDPSGKQLMQWPIEELETLRGS 394
Query: 380 QVQVPSKL-LKGGSVIEVTGVTAAQVSSCLYASKLVMNKRR 419
+V+ K L G ++EV G+TAAQ + S + KR
Sbjct: 395 KVKFSRKQDLSKGILVEVKGITAAQADVEVTFSFKSLAKRE 435
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q70XE6|6FEH_BETVU Fructan 6-exohydrolase OS=Beta vulgaris GN=6-FEH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/401 (58%), Positives = 295/401 (73%), Gaps = 11/401 (2%)
Query: 14 LFLGHGVVELQASHHVYRN--------LQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVM 65
+ L HG++ + ++ + + Q + + PYRT YHFQ PKNW+NDPNG M
Sbjct: 16 MLLSHGMIIIAKDQAIHHHDDDHDDMLINDHQMINDDDPYRTAYHFQSPKNWMNDPNGPM 75
Query: 66 IYKGIYHLFYQYNPKGAVW-GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSAT 124
IYKGIYHLFYQY P VW IVW HSTS DLINW A+ PS+ DINGCWSGS T
Sbjct: 76 IYKGIYHLFYQYYPYDPVWHTEIVWGHSTSTDLINWTQQPIALSPSEPYDINGCWSGSIT 135
Query: 125 ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA--PDAMNQINTS 182
ILP KP I YTGI+ N QVQNLA+PKNLSDPYL+EW+K P+NPLMA P N IN S
Sbjct: 136 ILPQNKPVILYTGINNKNYQVQNLALPKNLSDPYLKEWIKLPQNPLMAGTPTNNNNINAS 195
Query: 183 SFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECP 242
SFRDP+TAW D +WRVI+G++ ++GLA+L+ S DFV W +PLHS +G G+WECP
Sbjct: 196 SFRDPSTAWQLSDGKWRVIVGTQQGKRGLAVLFTSDDFVKWNNTGNPLHSTEGNGIWECP 255
Query: 243 DFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESD 302
DFFPV G DTS +G + KHVLK+SL DT++EYYT+G Y KD YVPDEGS+ESD
Sbjct: 256 DFFPVYVGKSLGADTSIIGDDVKHVLKLSLFDTQYEYYTIGRYDIEKDIYVPDEGSIESD 315
Query: 303 SGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362
GLR+DYGK+YASK+FFD NRR+LWGWVNESS DD+KKGW+G+QAIPR + LDKSG
Sbjct: 316 LGLRYDYGKFYASKSFFDDETNRRILWGWVNESSIQADDIKKGWSGVQAIPRTVVLDKSG 375
Query: 363 KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQ 403
K LVQWP+ E++ LR N V++PS+++KGGS++E++ +TA+Q
Sbjct: 376 KQLVQWPLAEVDMLRENDVELPSQVIKGGSLVEISQITASQ 416
|
Hydrolyzes levan-type beta-(2->6)-linked fructans to fructose, but not inulin-type beta-(2->1)-linked fructans. Beta vulgaris (taxid: 161934) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 1 EC: 5 EC: 4 |
| >sp|Q39692|INV2_DAUCA Beta-fructofuranosidase, insoluble isoenzyme 2 OS=Daucus carota GN=INV2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/407 (59%), Positives = 292/407 (71%), Gaps = 10/407 (2%)
Query: 4 FYLSLFL---FFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWIND 60
F+ LFL F L + ++ASH V+ LQ+ + + +RTGYHFQP K+WIND
Sbjct: 16 FHSMLFLSAVVFIFSLDVNIRGVEASHQVFPELQSVSAVNVQLVHRTGYHFQPKKHWIND 75
Query: 61 PNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWS 120
PNG M YKG YHLFYQYNPKGAVWGNIVWAHS SKDLINW+ +PAI+PS+ D GCWS
Sbjct: 76 PNGPMYYKGFYHLFYQYNPKGAVWGNIVWAHSISKDLINWVALEPAIFPSKPFDKYGCWS 135
Query: 121 GSATILPGEKPAIFYTGI---DPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN 177
GSAT+LPG KP I YTGI P N QVQN AVP N SDPYLREW+K NP++ + N
Sbjct: 136 GSATVLPGGKPVIMYTGIVTPSPVNTQVQNFAVPANYSDPYLREWIKPDNNPIVRARSEN 195
Query: 178 QINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTG 237
+SSFRDPTTAW W++++GS+ +G+A LYRS++F+ W KAKHPLHS TG
Sbjct: 196 ---SSSFRDPTTAWFD-GVHWKILVGSRRKHRGIAYLYRSRNFLKWTKAKHPLHSKDRTG 251
Query: 238 MWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEG 297
MWEC DF+PV+ G+NGLDTS G + KHVLKVSL T++EYYTVG Y D YVPD
Sbjct: 252 MWECLDFYPVAPKGMNGLDTSVTGQDIKHVLKVSLYSTRYEYYTVGEYDRDNDIYVPDNT 311
Query: 298 SVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLW 357
SV+ +GLR+DYG +YASKTFFD K RR+LWGW NES S DDV+KGWAGIQ IPRKLW
Sbjct: 312 SVDGWAGLRYDYGNFYASKTFFDPDKQRRILWGWANESDSKQDDVQKGWAGIQLIPRKLW 371
Query: 358 LDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
LD +GK L+QWP+ EI+ LR V + S++L G IEV GVTAAQ
Sbjct: 372 LDPNGKQLIQWPIEEIQLLRGQNVHMGSQVLNTGEHIEVKGVTAAQA 418
|
May play an important role in phloem unloading and in stress response. Daucus carota (taxid: 4039) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q0JDC6|INV3_ORYSJ Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Oryza sativa subsp. japonica GN=CIN3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/407 (59%), Positives = 293/407 (71%), Gaps = 13/407 (3%)
Query: 7 SLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMI 66
+ +F AL VV ++ASH VY LQ+ ++ + RTGYHFQPPK+WINDPNG M
Sbjct: 8 AALVFVALLQMAAVVVVRASHVVYPELQSLEAKHVDGKLRTGYHFQPPKHWINDPNGPMY 67
Query: 67 YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATIL 126
YKG+YHLFYQYNPKGAVWGNI WAHS S DLI+W +P IYPS+ D GCWSGSAT+L
Sbjct: 68 YKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDWTALEPGIYPSKTFDEKGCWSGSATVL 127
Query: 127 PGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRD 186
P P I YTGIDP RQVQN+A P NLSDPYLREW K NP++ PD IN S+FRD
Sbjct: 128 PSGVPVIMYTGIDPDERQVQNVAYPVNLSDPYLREWYKPDYNPIINPDG--GINASAFRD 185
Query: 187 PTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246
PTTAW GPD WR+++GSK+N KGLA+LYRS+DF W+KA HPLHS TGMWECPDFFP
Sbjct: 186 PTTAWYGPDGHWRLLVGSKVNMKGLAVLYRSRDFKKWVKAHHPLHSAH-TGMWECPDFFP 244
Query: 247 VSTYG-----LNGLDTSDM-----GPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDE 296
V+ G G+DT+++ K+VLKVSLD T++EYYTVG Y A DRYVPD
Sbjct: 245 VAVAGGSRHYRRGVDTAELHDAAVAEEVKYVLKVSLDLTRYEYYTVGWYDHATDRYVPDA 304
Query: 297 GSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKL 356
++D GLR+DYG +YASK+F+D AK RR++WGW NES +V DD +KGWAGIQAIPRKL
Sbjct: 305 AFPDNDYGLRYDYGDFYASKSFYDPAKRRRIVWGWANESDTVPDDRRKGWAGIQAIPRKL 364
Query: 357 WLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQ 403
WL GK LVQWPV E++ LR V V K++K G+ EVTG + Q
Sbjct: 365 WLSADGKQLVQWPVEELKALRAKHVNVTDKVIKKGNYFEVTGFKSVQ 411
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q01IS8|INV3_ORYSI Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Oryza sativa subsp. indica GN=CIN3 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/407 (59%), Positives = 293/407 (71%), Gaps = 13/407 (3%)
Query: 7 SLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMI 66
+ +F AL VV ++ASH VY LQ+ ++ + RTGYHFQPPK+WINDPNG M
Sbjct: 8 AALVFVALLQMAAVVVVRASHVVYPELQSLEAKHVDGKLRTGYHFQPPKHWINDPNGPMY 67
Query: 67 YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATIL 126
YKG+YHLFYQYNPKGAVWGNI WAHS S DLI+W +P IYPS+ D GCWSGSAT+L
Sbjct: 68 YKGLYHLFYQYNPKGAVWGNIEWAHSVSTDLIDWTALEPGIYPSKTFDEKGCWSGSATVL 127
Query: 127 PGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRD 186
P P I YTGIDP RQVQN+A P NLSDPYLREW K NP++ PD IN S+FRD
Sbjct: 128 PSGVPVIMYTGIDPDERQVQNVAYPVNLSDPYLREWYKPDYNPIINPDG--GINASAFRD 185
Query: 187 PTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246
PTTAW GPD WR+++GSK+N KGLA+LYRS+DF W+KA HPLHS TGMWECPDFFP
Sbjct: 186 PTTAWYGPDGHWRLLVGSKVNMKGLAVLYRSRDFKKWVKAHHPLHSAH-TGMWECPDFFP 244
Query: 247 VSTYG-----LNGLDTSDM-----GPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDE 296
V+ G G+DT+++ K+VLKVSLD T++EYYTVG Y A DRYVPD
Sbjct: 245 VAVAGGSRHYRRGVDTAELHDAAVAEEVKYVLKVSLDLTRYEYYTVGWYDHATDRYVPDA 304
Query: 297 GSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKL 356
++D GLR+DYG +YASK+F+D AK RR++WGW NES +V DD +KGWAGIQAIPRKL
Sbjct: 305 AFPDNDYGLRYDYGDFYASKSFYDPAKRRRIVWGWANESDTVPDDRRKGWAGIQAIPRKL 364
Query: 357 WLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQ 403
WL GK LVQWPV E++ LR V V K++K G+ EVTG + Q
Sbjct: 365 WLSADGKQLVQWPVEELKALRAKHVNVTDKVIKKGNYFEVTGFKSVQ 411
|
Oryza sativa subsp. indica (taxid: 39946) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q8W413|INV4_ARATH Beta-fructofuranosidase, insoluble isoenzyme CWINV4 OS=Arabidopsis thaliana GN=CWINV4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/394 (58%), Positives = 283/394 (71%), Gaps = 5/394 (1%)
Query: 23 LQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGA 82
+ A H +Y LQ+ S N +R +HFQPPK+WINDPNG + YKG+YHLFYQYN KGA
Sbjct: 27 IDAFHQIYEELQSESVESVNHLHRPSFHFQPPKHWINDPNGPVYYKGLYHLFYQYNTKGA 86
Query: 83 VWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHN 142
VWGNI+WAHS SKDL+NW +PA+ PS+ DI G WSGS TI+PG+ P I YTG++ +
Sbjct: 87 VWGNIIWAHSVSKDLVNWEALEPALSPSKWFDIGGTWSGSITIVPGKGPIILYTGVNQNE 146
Query: 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202
Q+QN A+P++ SDPYLR+W+K NP+ PD +N S+FRDPTTAW D WR ++
Sbjct: 147 TQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYT--MNGSAFRDPTTAWFSKDGHWRTVV 204
Query: 203 GSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGL-NGLDTSDMG 261
GSK R+G+A +YRS+DF HW+KAKHP+HS + TGMWECPDFFPVS NGLD +G
Sbjct: 205 GSKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGMWECPDFFPVSLTDFRNGLDLDYVG 264
Query: 262 PNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDG 321
PNTKHVLKVSLD T++EYYT+G Y KDRY+PD + + GLRFDYG +YASKTFFD
Sbjct: 265 PNTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGNTPDGWEGLRFDYGNFYASKTFFDY 324
Query: 322 AKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQV 381
KNRR+LWGW NES +V DD+ KGWAG+Q IPR + LD S K LV WPV EIE LR N V
Sbjct: 325 KKNRRILWGWANESDTVEDDILKGWAGLQVIPRTVLLDSSKKQLVFWPVEEIESLRGNYV 384
Query: 382 QVPSKLLKGGSVIEVTGVTAAQ--VSSCLYASKL 413
++ + +K G IEV G+T AQ V Y L
Sbjct: 385 RMNNHDIKMGQRIEVKGITPAQADVEVTFYVGSL 418
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 428 | ||||||
| 408362889 | 577 | cell wall invertase [Malus x domestica] | 0.943 | 0.700 | 0.756 | 0.0 | |
| 385282634 | 577 | cell wall invertase 1 [Prunus persica] | 0.927 | 0.688 | 0.751 | 0.0 | |
| 4205115 | 577 | cell wall invertase precursor [Fragaria | 0.936 | 0.694 | 0.745 | 1e-178 | |
| 375300670 | 576 | cell wall invertase [Manihot esculenta] | 0.906 | 0.673 | 0.754 | 1e-174 | |
| 356556769 | 575 | PREDICTED: beta-fructofuranosidase, cell | 0.932 | 0.693 | 0.711 | 1e-171 | |
| 449448102 | 585 | PREDICTED: beta-fructofuranosidase, inso | 0.929 | 0.680 | 0.708 | 1e-170 | |
| 449523748 | 585 | PREDICTED: beta-fructofuranosidase, inso | 0.929 | 0.680 | 0.708 | 1e-170 | |
| 225442303 | 575 | PREDICTED: beta-fructofuranosidase, inso | 0.906 | 0.674 | 0.710 | 1e-167 | |
| 356556771 | 572 | PREDICTED: beta-fructofuranosidase, cell | 0.925 | 0.692 | 0.703 | 1e-167 | |
| 380469814 | 564 | acid invertase [Kummerowia stipulacea] | 0.915 | 0.695 | 0.700 | 1e-167 |
| >gi|408362889|gb|AFU56876.1| cell wall invertase [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/410 (75%), Positives = 348/410 (84%), Gaps = 6/410 (1%)
Query: 1 MANFYLSLFLFFALFLGHGVVELQASHHVYRNLQT-SQSTSPN-----QPYRTGYHFQPP 54
MA L L+ F L+LGH V+ L+ASHHVYR+LQT S+ TS + +PYRTGYHFQPP
Sbjct: 1 MAISSLFLYCFLCLWLGHAVLRLEASHHVYRSLQTYSELTSSHHHPDTEPYRTGYHFQPP 60
Query: 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD 114
KNWINDPNG +IYKGIYHLFYQYNPKG VWGNIVWAHSTS DL+NW PHD AI+PSQ SD
Sbjct: 61 KNWINDPNGPLIYKGIYHLFYQYNPKGVVWGNIVWAHSTSTDLVNWTPHDAAIFPSQPSD 120
Query: 115 INGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD 174
INGCWSGSATILP KP I YTGI+P N+QVQNLA PKNLSDP+LREWVK P+NPLMAP
Sbjct: 121 INGCWSGSATILPSGKPVILYTGINPQNQQVQNLAYPKNLSDPFLREWVKVPQNPLMAPT 180
Query: 175 AMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK 234
N IN SSFRDPTTAWLGPDKRWRVIIGSK N++GLAILYRSKDF+ W+KAKHPLHS K
Sbjct: 181 QANHINASSFRDPTTAWLGPDKRWRVIIGSKQNQRGLAILYRSKDFLSWVKAKHPLHSAK 240
Query: 235 GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVP 294
TGMWECPDFFPVS +G NGLD+S+ GP KHVLK SLD+TKHEYYT+GTY+ KD Y+P
Sbjct: 241 KTGMWECPDFFPVSIHGQNGLDSSENGPAVKHVLKASLDNTKHEYYTIGTYNIDKDIYIP 300
Query: 295 DEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPR 354
D+GSVESDSGLR+DYGK+YASKTFFD +KNRR+LWGW+NESSSV D+KKGW+G+QAIPR
Sbjct: 301 DKGSVESDSGLRYDYGKFYASKTFFDSSKNRRILWGWINESSSVEGDIKKGWSGLQAIPR 360
Query: 355 KLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
LWL KSGK LVQWPV EIEKLR V++PS +LKGGSV EV GVTAAQ
Sbjct: 361 TLWLAKSGKQLVQWPVQEIEKLRGKTVKLPSTVLKGGSVREVVGVTAAQA 410
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|385282634|gb|AFI57904.1| cell wall invertase 1 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/403 (75%), Positives = 342/403 (84%), Gaps = 6/403 (1%)
Query: 8 LFLFFALFLGHGVVELQASHHVYRNLQT-SQSTSP-----NQPYRTGYHFQPPKNWINDP 61
L+ F +L+LGH V +L+ASH VYRNL T SQ TS N+PYRTGYHFQPPKNWINDP
Sbjct: 8 LYCFLSLWLGHAVHQLEASHQVYRNLPTYSQLTSSHHHPVNEPYRTGYHFQPPKNWINDP 67
Query: 62 NGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSG 121
NG +IYKGIYH FYQYNP VWGNIVWAHSTS DL+NW PHD AIYPSQ SDINGCWSG
Sbjct: 68 NGPLIYKGIYHFFYQYNPLDVVWGNIVWAHSTSTDLVNWTPHDAAIYPSQPSDINGCWSG 127
Query: 122 SATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINT 181
SATILPG KP + YTGIDP NRQVQNLA PKNLSDP+LREW K P+NPLMAP NQIN
Sbjct: 128 SATILPGGKPVMLYTGIDPQNRQVQNLAYPKNLSDPFLREWAKIPQNPLMAPSQANQINA 187
Query: 182 SSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWEC 241
SSFRDPTTAWLGPDK+WRVIIG K N+ G AILYRSKDF++W+KAK PLHS + TGMWEC
Sbjct: 188 SSFRDPTTAWLGPDKKWRVIIGGKTNQTGEAILYRSKDFLNWVKAKQPLHSAEKTGMWEC 247
Query: 242 PDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVES 301
PDFFPVS + NGLDTS +GP+ KHV KVSLD+T+ EYYT+GTY+ KD Y+PD+GSVES
Sbjct: 248 PDFFPVSIHSQNGLDTSKIGPDVKHVFKVSLDNTRREYYTIGTYNIDKDIYIPDKGSVES 307
Query: 302 DSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKS 361
DSGLR+DYGK+YASKTFFD +KNRR+LWGW+NESS+V DD+KKGW+G+QAIPR LWLDKS
Sbjct: 308 DSGLRYDYGKFYASKTFFDSSKNRRILWGWINESSTVEDDIKKGWSGLQAIPRTLWLDKS 367
Query: 362 GKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
GK LVQWPVVEIEKLR +V++PS +LKGGSV EV GVTAAQ
Sbjct: 368 GKQLVQWPVVEIEKLREKEVKLPSSVLKGGSVHEVLGVTAAQA 410
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4205115|gb|AAD10960.1| cell wall invertase precursor [Fragaria x ananassa] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 302/405 (74%), Positives = 339/405 (83%), Gaps = 4/405 (0%)
Query: 4 FYLSLFLFFALFLGHGVVELQASHHVYRNLQTSQ--STSPN--QPYRTGYHFQPPKNWIN 59
F L F +L L GV+ELQASHHVY NLQT+Q ST P PYRTGYHFQP KNWIN
Sbjct: 3 FSLWQFCLLSLLLSFGVIELQASHHVYSNLQTTQLASTHPQAKDPYRTGYHFQPRKNWIN 62
Query: 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCW 119
DPNG +IYKGIYHLFYQYNP VWGNIVWAHSTS DL+NWIPH+ AIYPS SDINGCW
Sbjct: 63 DPNGPLIYKGIYHLFYQYNPSSVVWGNIVWAHSTSTDLVNWIPHEAAIYPSILSDINGCW 122
Query: 120 SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQI 179
SGS TILP KPAI YTGI+P QVQNLA PKNLSDP+LREWVK P+NPLMAP NQI
Sbjct: 123 SGSVTILPSGKPAILYTGINPDKEQVQNLAFPKNLSDPFLREWVKVPQNPLMAPTQANQI 182
Query: 180 NTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMW 239
N SSFRDPTTAWLGPDKRWR+IIGSK N +GLAILYRSKDF+HW KAKHPL+S GMW
Sbjct: 183 NASSFRDPTTAWLGPDKRWRLIIGSKRNHRGLAILYRSKDFMHWTKAKHPLYSTPKNGMW 242
Query: 240 ECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSV 299
ECPDFFPVS L GLDTS +GP+ KHVLKVSLD+T+ EYYT+GTY+ +KD Y+PD+GS+
Sbjct: 243 ECPDFFPVSKTKLLGLDTSAIGPDVKHVLKVSLDNTRKEYYTIGTYNVSKDIYIPDDGSI 302
Query: 300 ESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLD 359
ESDSGLR+DYGK+YASKTFFD AKNRR+LWGW+NESSSV+ D+KKGW+G+QAIPR + LD
Sbjct: 303 ESDSGLRYDYGKFYASKTFFDSAKNRRILWGWINESSSVSGDIKKGWSGLQAIPRTIVLD 362
Query: 360 KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
KS K LVQWPVVE+EKLR N+V++PS LLKGGS+ EV GVTAAQ
Sbjct: 363 KSRKQLVQWPVVELEKLRTNEVKLPSTLLKGGSLHEVIGVTAAQA 407
|
Source: Fragaria x ananassa Species: Fragaria x ananassa Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|375300670|gb|AFA46812.1| cell wall invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/391 (75%), Positives = 330/391 (84%), Gaps = 3/391 (0%)
Query: 17 GHGVVELQASHHVY---RNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHL 73
G+GV EL+ASHH+Y +NLQ S ++ +QPYRT YHFQPPKNW+NDPNG MIYKG+YHL
Sbjct: 18 GYGVFELEASHHIYHTFQNLQESAVSASSQPYRTSYHFQPPKNWMNDPNGPMIYKGLYHL 77
Query: 74 FYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133
FYQYNPKGAVWGNIVW HSTSKDL+NW PH AIYPSQ SDING WSGSATILP KPAI
Sbjct: 78 FYQYNPKGAVWGNIVWGHSTSKDLVNWTPHKVAIYPSQPSDINGTWSGSATILPDGKPAI 137
Query: 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG 193
YTGI+P N+QVQNLA+PKN SDPYL EWVKSP NPLMAP NQIN SSFRDPTTAW G
Sbjct: 138 LYTGINPLNQQVQNLAIPKNPSDPYLIEWVKSPNNPLMAPTPENQINASSFRDPTTAWRG 197
Query: 194 PDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLN 253
D RW+VI+GSKINRKGLA LYRSKDFV+WIKAKHPLHS K TGMWEC DFFPVS
Sbjct: 198 VDGRWKVIVGSKINRKGLAYLYRSKDFVYWIKAKHPLHSAKNTGMWECVDFFPVSANSPV 257
Query: 254 GLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYY 313
G++ S +G + K+VLK SLDDTKH+ YT+G Y KDRY PDEGSVE D GLR+DYGK+Y
Sbjct: 258 GVEMSVLGSDFKYVLKASLDDTKHDCYTIGEYDHVKDRYTPDEGSVEGDPGLRYDYGKFY 317
Query: 314 ASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEI 373
ASKTFFD AKNRR+LWGW+NESSSV+DD+KKGWAGIQAIPR +WLDKSGK LVQWP+ EI
Sbjct: 318 ASKTFFDSAKNRRLLWGWLNESSSVSDDIKKGWAGIQAIPRVVWLDKSGKQLVQWPIQEI 377
Query: 374 EKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
EKLRVN V +PS+ LKGGSV+EV GVTA+Q
Sbjct: 378 EKLRVNPVHLPSQYLKGGSVVEVPGVTASQA 408
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556769|ref|XP_003546695.1| PREDICTED: beta-fructofuranosidase, cell wall isozyme-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/402 (71%), Positives = 331/402 (82%), Gaps = 3/402 (0%)
Query: 6 LSLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVM 65
L L F+L G+G++ ++A+HHVYRNLQT S S +QPYRT YHFQPPKNWINDPNG M
Sbjct: 7 LLLLAIFSLIYGNGILPIEATHHVYRNLQTLSSDSSDQPYRTAYHFQPPKNWINDPNGPM 66
Query: 66 IYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI 125
YKG+YHLFYQYNPKGAVWGNIVWAHS SKDL+NW P D AIYPSQ SDINGCWSGSATI
Sbjct: 67 RYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIYPSQPSDINGCWSGSATI 126
Query: 126 LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFR 185
LPG KPAI YTGIDP+N QVQNLA+PKN+SDP LREWVKSPKNPLMAP + N IN+SSFR
Sbjct: 127 LPGGKPAILYTGIDPNNHQVQNLALPKNMSDPLLREWVKSPKNPLMAPTSANMINSSSFR 186
Query: 186 DPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFF 245
DPTTAWLG D WRV+IGSKI+ +G+AILY+SK+FV+W++AK PLHS +GTGMWECPDF+
Sbjct: 187 DPTTAWLGKDGYWRVLIGSKIHTRGMAILYKSKNFVNWVQAKQPLHSAEGTGMWECPDFY 246
Query: 246 PV---STYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESD 302
PV GLDTS G N +HVLKVSLDD KH++Y +GTY AKD + PD G +S
Sbjct: 247 PVLNNKPSSTIGLDTSVNGDNVRHVLKVSLDDKKHDHYLIGTYDIAKDIFTPDNGFEDSQ 306
Query: 303 SGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362
+ LR+DYGKYYASKT F+ KNRRVL GWVNESSSV+DD+KKGWAGI IPR +WL KSG
Sbjct: 307 TVLRYDYGKYYASKTIFEDGKNRRVLLGWVNESSSVSDDIKKGWAGIHTIPRAIWLHKSG 366
Query: 363 KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
K LVQWPVVE+E LRVN V P+K++KGG +++VTGVTAAQ
Sbjct: 367 KQLVQWPVVELESLRVNPVHWPTKVVKGGEMLQVTGVTAAQA 408
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449448102|ref|XP_004141805.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 289/408 (70%), Positives = 327/408 (80%), Gaps = 10/408 (2%)
Query: 4 FYLSLFLFFALFLGHGVVELQASHHVYRNLQTSQSTS-------PNQPYRTGYHFQPPKN 56
F ++FL L GH ++LQA HHVYR S TS QPYRT YHFQPPKN
Sbjct: 10 FLNNIFLLIFLLFGHEFLQLQALHHVYR---ASHRTSHFVLHQHQQQPYRTSYHFQPPKN 66
Query: 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDIN 116
WINDPNG MIYKGIYH FYQYNPKGAVWGNIVWAHSTS DLINW PHD AI+PSQ SDIN
Sbjct: 67 WINDPNGPMIYKGIYHFFYQYNPKGAVWGNIVWAHSTSTDLINWEPHDHAIFPSQPSDIN 126
Query: 117 GCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM 176
GCWSGSATILPGEKPAI YTGI+P N+QVQNLAVPKNLSDPYLREWVKSPKNPLMAP
Sbjct: 127 GCWSGSATILPGEKPAILYTGINPKNQQVQNLAVPKNLSDPYLREWVKSPKNPLMAPTPQ 186
Query: 177 NQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGT 236
N IN SSFRDPTTAWLG D WRVIIGSKI+ +GLAI+YRSKDFV W + HPL
Sbjct: 187 NHINVSSFRDPTTAWLGRDGEWRVIIGSKIDARGLAIMYRSKDFVRWNQVDHPLRYKDDM 246
Query: 237 GMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDE 296
GMWECPDFFPV+ G G++ G + KH+LKVSLDDTKH+ YTVGTY+ KD Y+P++
Sbjct: 247 GMWECPDFFPVAKTGRTGVEMKVSGSHVKHILKVSLDDTKHDVYTVGTYNWKKDIYIPNK 306
Query: 297 GSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKL 356
GS+E +GLR+DYGKYYASKTFFD K RRVLWGWVNESSSV+DD+KKGW+G+QAIPR +
Sbjct: 307 GSIEGYNGLRYDYGKYYASKTFFDSQKKRRVLWGWVNESSSVDDDIKKGWSGVQAIPRAI 366
Query: 357 WLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
WLD SGK L+QWP+VEI+KLR N+V++ +++LK GS IEV GVTAAQ
Sbjct: 367 WLDASGKQLIQWPIVEIQKLRNNKVKLTNEVLKKGSTIEVKGVTAAQA 414
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449523748|ref|XP_004168885.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 289/408 (70%), Positives = 327/408 (80%), Gaps = 10/408 (2%)
Query: 4 FYLSLFLFFALFLGHGVVELQASHHVYRNLQTSQSTS-------PNQPYRTGYHFQPPKN 56
F ++FL L GH ++LQA HHVYR S TS QPYRT YHFQPPKN
Sbjct: 10 FLNNIFLLIFLLFGHEFLQLQALHHVYR---ASHRTSHFVLHQHQQQPYRTSYHFQPPKN 66
Query: 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDIN 116
WINDPNG MIYKGIYH FYQYNPKGAVWGNIVWAHSTS DLINW PHD AI+PSQ SDIN
Sbjct: 67 WINDPNGPMIYKGIYHFFYQYNPKGAVWGNIVWAHSTSTDLINWEPHDHAIFPSQPSDIN 126
Query: 117 GCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM 176
GCWSGSATILPGEKPAI YTGI+P N+QVQNLAVPKNLSDPYLREWVKSPKNPLMAP
Sbjct: 127 GCWSGSATILPGEKPAILYTGINPKNQQVQNLAVPKNLSDPYLREWVKSPKNPLMAPTPQ 186
Query: 177 NQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGT 236
N IN SSFRDPTTAWLG D WRVIIGSKI+ +GLAI+YRSKDFV W + HPL
Sbjct: 187 NHINVSSFRDPTTAWLGRDGEWRVIIGSKIDSRGLAIMYRSKDFVRWNQVDHPLRYKDDM 246
Query: 237 GMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDE 296
GMWECPDFFPV+ G G++ G + KH+LKVSLDDTKH+ YTVGTY+ KD Y+P++
Sbjct: 247 GMWECPDFFPVAKTGRTGVEMKVSGSHVKHILKVSLDDTKHDVYTVGTYNWKKDIYIPNK 306
Query: 297 GSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKL 356
GS+E +GLR+DYGKYYASKTFFD K RRVLWGWVNESSSV+DD+KKGW+G+QAIPR +
Sbjct: 307 GSIEGYNGLRYDYGKYYASKTFFDSQKKRRVLWGWVNESSSVDDDIKKGWSGVQAIPRAI 366
Query: 357 WLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
WLD SGK L+QWP+VEI+KLR N+V++ +++LK GS IEV GVTAAQ
Sbjct: 367 WLDASGKQLIQWPIVEIQKLRDNKVKLTNEVLKKGSTIEVKGVTAAQA 414
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442303|ref|XP_002279788.1| PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 277/390 (71%), Positives = 319/390 (81%), Gaps = 2/390 (0%)
Query: 17 GHGVVELQASHHVYRNLQTSQSTS--PNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLF 74
GHG V L+ASH VY +LQ +S +QPYRTGYHFQP KNW+NDPNG MIYKG+YH F
Sbjct: 18 GHGFVPLEASHQVYIHLQNQSPSSLKTHQPYRTGYHFQPRKNWMNDPNGPMIYKGLYHFF 77
Query: 75 YQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134
YQYNP GAVWGNIVWAHSTS DL+NW PH AI PSQ +DINGCWSGSATILP KP I
Sbjct: 78 YQYNPHGAVWGNIVWAHSTSTDLVNWTPHKYAISPSQPADINGCWSGSATILPNGKPVIL 137
Query: 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP 194
YTGIDP N+QVQN+AVPKNLSDP+L EW K P+NPLM P +N IN SSFRDPTTAW G
Sbjct: 138 YTGIDPQNKQVQNMAVPKNLSDPFLLEWTKLPQNPLMEPTTINSINASSFRDPTTAWQGT 197
Query: 195 DKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNG 254
D RWRVIIGSKI RKGLAILYRSKDFV W KA+HPLHS K TGMWECPDFFPVS G
Sbjct: 198 DGRWRVIIGSKIKRKGLAILYRSKDFVRWTKAQHPLHSGKNTGMWECPDFFPVSINSSTG 257
Query: 255 LDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYA 314
+DTS + K+VLK+SLDDTKH+YYT+G+Y+ KD YVPD+GSV++DSGLR+DYGK+YA
Sbjct: 258 VDTSSISKTLKYVLKLSLDDTKHDYYTIGSYNREKDTYVPDKGSVDNDSGLRYDYGKFYA 317
Query: 315 SKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIE 374
SKTFFD AKNRR+LWGW+NESSSV D++KGW+G+QAIPR +WLDKSGK L+QWP+ EIE
Sbjct: 318 SKTFFDNAKNRRILWGWINESSSVEHDIEKGWSGVQAIPRNVWLDKSGKQLLQWPIAEIE 377
Query: 375 KLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
K R+ + S+ LKGGS +EV G+TA+Q
Sbjct: 378 KQRIKPGHMSSRELKGGSKVEVGGITASQA 407
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356556771|ref|XP_003546696.1| PREDICTED: beta-fructofuranosidase, cell wall isozyme-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/402 (70%), Positives = 328/402 (81%), Gaps = 6/402 (1%)
Query: 6 LSLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVM 65
L L F+L G+G++ ++A+HHVYRNLQT S S +QPYRT YHFQPPKNWIN P M
Sbjct: 7 LLLLAIFSLIYGNGILPIEATHHVYRNLQTLSSDSSDQPYRTAYHFQPPKNWINGP---M 63
Query: 66 IYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI 125
YKG+YHLFYQYNPKGAVWGNIVWAHS SKDL+NW P D AIYPSQ SDINGCWSGSATI
Sbjct: 64 RYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIYPSQPSDINGCWSGSATI 123
Query: 126 LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFR 185
LPG KPAI YTGIDP+N QVQNLA+PKN+SDP LREWVKSPKNPLMAP + N IN+SSFR
Sbjct: 124 LPGGKPAILYTGIDPNNHQVQNLALPKNMSDPLLREWVKSPKNPLMAPTSANMINSSSFR 183
Query: 186 DPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFF 245
DPTTAWLG D WRV+IGSKI+ +G+AILY+SK+FV+W++AK PLHS +GTGMWECPDF+
Sbjct: 184 DPTTAWLGKDGYWRVLIGSKIHTRGMAILYKSKNFVNWVQAKQPLHSAEGTGMWECPDFY 243
Query: 246 PV---STYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESD 302
PV GLDTS G N +HVLKVSLDD KH++Y +GTY AKD + PD G +S
Sbjct: 244 PVLNNKPSSTIGLDTSVNGDNVRHVLKVSLDDKKHDHYLIGTYDIAKDIFTPDNGFEDSQ 303
Query: 303 SGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362
+ LR+DYGKYYASKT F+ KNRRVL GWVNESSSV+DD+KKGWAGI IPR +WL KSG
Sbjct: 304 TVLRYDYGKYYASKTIFEDGKNRRVLLGWVNESSSVSDDIKKGWAGIHTIPRAIWLHKSG 363
Query: 363 KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
K LVQWPVVE+E LRVN V P+K++KGG +++VTGVTAAQ
Sbjct: 364 KQLVQWPVVELESLRVNPVHWPTKVVKGGEMLQVTGVTAAQA 405
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|380469814|gb|AFD62258.1| acid invertase [Kummerowia stipulacea] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 278/397 (70%), Positives = 324/397 (81%), Gaps = 5/397 (1%)
Query: 7 SLFLFFALFLGHGVVELQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMI 66
S++LF + +G V A HHVYRNLQ+ S S NQPYRT YHFQPPKNWINDPNG +
Sbjct: 5 SIWLFTLFCVIYGSV---AEHHVYRNLQSVSSGSTNQPYRTAYHFQPPKNWINDPNGPLR 61
Query: 67 YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATIL 126
Y+G+YHLFYQYNPKGAVWGNIVWAHS SKDL+NW P DPAI+PSQ SDINGCWSGS T+L
Sbjct: 62 YRGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDPAIFPSQPSDINGCWSGSTTLL 121
Query: 127 PGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRD 186
PG KPAI YTGIDP N+QVQNLA PKNLSDP+LREWVKSPKNPLMAP + N+IN+SSFRD
Sbjct: 122 PGNKPAILYTGIDPQNQQVQNLAQPKNLSDPFLREWVKSPKNPLMAPTSANKINSSSFRD 181
Query: 187 PTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246
PTTAWLG D WRV++GSK +GLAILYRSKDFV+W++AKHPLHS G+G+WECPDFFP
Sbjct: 182 PTTAWLGKDGHWRVLVGSKRRTRGLAILYRSKDFVNWVQAKHPLHSTLGSGIWECPDFFP 241
Query: 247 VSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLR 306
V G GLDTS +G HVLKVSLDD KH+YY +G+Y+ AKD ++PD G+ E LR
Sbjct: 242 VLNKGTLGLDTSVIGNYVSHVLKVSLDDKKHDYYMIGSYNVAKDAFIPDNGAKE--FVLR 299
Query: 307 FDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLV 366
+DYGKYYASKTFFD K RR+L GWVNESSSV DD+KKGW+GI IPR +WL +SGK LV
Sbjct: 300 YDYGKYYASKTFFDDGKKRRILLGWVNESSSVADDIKKGWSGIHTIPRTIWLHESGKQLV 359
Query: 367 QWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQ 403
QWPVVE+EKLR N V +P ++LKGG ++++ GVTA Q
Sbjct: 360 QWPVVEVEKLRANPVNLPPQVLKGGQLLQINGVTATQ 396
|
Source: Kummerowia stipulacea Species: Kummerowia stipulacea Genus: Kummerowia Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 428 | ||||||
| TAIR|locus:2091606 | 584 | ATBFRUCT1 [Arabidopsis thalian | 0.904 | 0.662 | 0.723 | 2.5e-161 | |
| TAIR|locus:2205677 | 594 | FRUCT5 "beta-fructofuranosidas | 0.869 | 0.626 | 0.650 | 1.3e-137 | |
| TAIR|locus:2049445 | 591 | cwINV4 "cell wall invertase 4" | 0.908 | 0.658 | 0.583 | 2.8e-130 | |
| TAIR|locus:2079944 | 590 | CWINV2 "cell wall invertase 2" | 0.885 | 0.642 | 0.612 | 9.3e-130 | |
| TAIR|locus:2143099 | 550 | cwINV6 "6-&1-fructan exohydrol | 0.827 | 0.643 | 0.519 | 7.7e-103 | |
| TAIR|locus:2026177 | 648 | AT1G62660 [Arabidopsis thalian | 0.831 | 0.549 | 0.511 | 3.9e-99 | |
| TAIR|locus:2201966 | 664 | ATBETAFRUCT4 [Arabidopsis thal | 0.829 | 0.534 | 0.501 | 2e-97 | |
| UNIPROTKB|Q9FSV7 | 654 | 1-SST "Sucrose:sucrose 1-fruct | 0.829 | 0.542 | 0.449 | 8.2e-83 | |
| UNIPROTKB|Q48BH6 | 497 | scrB "Sucrose-6-phosphate hydr | 0.733 | 0.631 | 0.316 | 1e-36 | |
| UNIPROTKB|Q4KBP1 | 499 | scrB "Sucrose-6-phosphate hydr | 0.75 | 0.643 | 0.305 | 7.2e-36 |
| TAIR|locus:2091606 ATBFRUCT1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1571 (558.1 bits), Expect = 2.5e-161, P = 2.5e-161
Identities = 285/394 (72%), Positives = 326/394 (82%)
Query: 17 GHGVVELQASHHVYRNLQTSQST-SP--NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHL 73
G+ VV L+ASHHVY+ L S +T SP NQPYRTG+HFQPPKNW+NDPNG MIYKGIYHL
Sbjct: 20 GNYVVNLEASHHVYKRLTQSTNTKSPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHL 79
Query: 74 FYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133
FYQ+NPKGAVWGNIVWAHSTS DLINW PH PAI+PS DINGCWSGSATILP KP I
Sbjct: 80 FYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVI 139
Query: 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG 193
YTGIDP N+QVQN+A PKNLSDPYLREW KSP NPLMAPDA+N IN SSFRDPTTAWLG
Sbjct: 140 LYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLG 199
Query: 194 PDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLN 253
DK+WRVIIGSKI+R+GLAI Y SKDF+ W K+ PLH G+GMWECPDFFPV+ +G N
Sbjct: 200 QDKKWRVIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSN 259
Query: 254 GLDTSDMG-PNT--KHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYG 310
G++TS G PN KHVLK+SLDDTKH+YYT+GTY KD++VPD G + R+DYG
Sbjct: 260 GVETSSFGEPNEILKHVLKISLDDTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYG 319
Query: 311 KYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPV 370
KYYASKTFFD AKNRR+LWGW NESSSV DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV
Sbjct: 320 KYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPV 379
Query: 371 VEIEKLRVNQVQ-VPSKLLKGGSVIEVTGVTAAQ 403
E+E+LR QV+ + +K+LK GS +EV GVTAAQ
Sbjct: 380 REVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQ 413
|
|
| TAIR|locus:2205677 FRUCT5 "beta-fructofuranosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
Identities = 244/375 (65%), Positives = 287/375 (76%)
Query: 32 NLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWA 90
+L+ S NQPYRTGYHFQP KNW+NDPNG MIYKGIYHLFYQYNP GAVW IVW
Sbjct: 25 DLEASSHQDLNQPYRTGYHFQPLKNWMNDPNGPMIYKGIYHLFYQYNPYGAVWDVRIVWG 84
Query: 91 HSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAV 150
HSTS DL+NWI PA PSQ SDINGCWSGS TILP KP I YTGID + QVQN+AV
Sbjct: 85 HSTSVDLVNWISQPPAFNPSQPSDINGCWSGSVTILPNGKPVILYTGIDQNKGQVQNVAV 144
Query: 151 PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RK 209
P N+SDPYLREW K P+NPLM +A+N IN FRDPTTAWLG D WRVI+GS + R+
Sbjct: 145 PVNISDPYLREWSKPPQNPLMTTNAVNGINPDRFRDPTTAWLGRDGEWRVIVGSSTDDRR 204
Query: 210 GLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPN-TKHVL 268
GLAILY+S+DF +W ++ PLH TGMWECPDFFPVS G +G++TS +G N KHVL
Sbjct: 205 GLAILYKSRDFFNWTQSMKPLHYEDLTGMWECPDFFPVSITGSDGVETSSVGENGIKHVL 264
Query: 269 KVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVL 328
KVSL +T H+YYT+G+Y KD YVPD G V+++S R DYGKYYASKTF+D K RR+L
Sbjct: 265 KVSLIETLHDYYTIGSYDREKDVYVPDLGFVQNESAPRLDYGKYYASKTFYDDVKKRRIL 324
Query: 329 WGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLL 388
WGWVNESS DD++KGW+G+Q+ PRK+WLD+SGK L+QWP+ EIE LR QV K+L
Sbjct: 325 WGWVNESSPAKDDIEKGWSGLQSFPRKIWLDESGKELLQWPIEEIETLRGQQVNWQKKVL 384
Query: 389 KGGSVIEVTGVTAAQ 403
K GS ++V GVTAAQ
Sbjct: 385 KAGSTLQVHGVTAAQ 399
|
|
| TAIR|locus:2049445 cwINV4 "cell wall invertase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1278 (454.9 bits), Expect = 2.8e-130, P = 2.8e-130
Identities = 230/394 (58%), Positives = 284/394 (72%)
Query: 23 LQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGA 82
+ A H +Y LQ+ S N +R +HFQPPK+WINDPNG + YKG+YHLFYQYN KGA
Sbjct: 27 IDAFHQIYEELQSESVESVNHLHRPSFHFQPPKHWINDPNGPVYYKGLYHLFYQYNTKGA 86
Query: 83 VWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHN 142
VWGNI+WAHS SKDL+NW +PA+ PS+ DI G WSGS TI+PG+ P I YTG++ +
Sbjct: 87 VWGNIIWAHSVSKDLVNWEALEPALSPSKWFDIGGTWSGSITIVPGKGPIILYTGVNQNE 146
Query: 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202
Q+QN A+P++ SDPYLR+W+K NP+ PD +N S+FRDPTTAW D WR ++
Sbjct: 147 TQLQNYAIPEDPSDPYLRKWIKPDDNPIAIPDYT--MNGSAFRDPTTAWFSKDGHWRTVV 204
Query: 203 GSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS-TYGLNGLDTSDMG 261
GSK R+G+A +YRS+DF HW+KAKHP+HS + TGMWECPDFFPVS T NGLD +G
Sbjct: 205 GSKRKRRGIAYIYRSRDFKHWVKAKHPVHSKQSTGMWECPDFFPVSLTDFRNGLDLDYVG 264
Query: 262 PNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDG 321
PNTKHVLKVSLD T++EYYT+G Y KDRY+PD + + GLRFDYG +YASKTFFD
Sbjct: 265 PNTKHVLKVSLDITRYEYYTLGKYDLKKDRYIPDGNTPDGWEGLRFDYGNFYASKTFFDY 324
Query: 322 AKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQV 381
KNRR+LWGW NES +V DD+ KGWAG+Q IPR + LD S K LV WPV EIE LR N V
Sbjct: 325 KKNRRILWGWANESDTVEDDILKGWAGLQVIPRTVLLDSSKKQLVFWPVEEIESLRGNYV 384
Query: 382 QVPSKLLKGGSVIEVTGVTAAQ--VSSCLYASKL 413
++ + +K G IEV G+T AQ V Y L
Sbjct: 385 RMNNHDIKMGQRIEVKGITPAQADVEVTFYVGSL 418
|
|
| TAIR|locus:2079944 CWINV2 "cell wall invertase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
Identities = 237/387 (61%), Positives = 286/387 (73%)
Query: 23 LQASHHVYRNLQTSQSTSPNQ--P-YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNP 79
+ A H V++ LQ S+STS P +RT YHFQPP++WINDPN M+YKG+YHLFYQYNP
Sbjct: 23 VDAFHKVFKKLQ-SKSTSLESVSPLHRTAYHFQPPRHWINDPNAPMLYKGVYHLFYQYNP 81
Query: 80 KGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGID 139
KGAVWGNIVWAHS SKDLINW +PAIYPS+ DING WSGSAT +PG+ P I YTGI
Sbjct: 82 KGAVWGNIVWAHSVSKDLINWEALEPAIYPSKWFDINGTWSGSATHVPGKGPVILYTGIT 141
Query: 140 PHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP-DKRW 198
+ Q+QN A+P++LSDPYL+ W+K NP++ PD N N S+FRDPTTAW D W
Sbjct: 142 ENQTQIQNYAIPQDLSDPYLKTWIKPDDNPIVKPD--NGENGSAFRDPTTAWFNKKDGYW 199
Query: 199 RVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS-TYGLNGLDT 257
R+++GSK +G+A +Y+S+DF W+K+K P+HS K TGMWECPDFFPVS T NGLD
Sbjct: 200 RMLVGSKRKNRGIAYMYKSRDFKKWVKSKRPIHSRKKTGMWECPDFFPVSVTDKKNGLDF 259
Query: 258 SDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKT 317
S GPN KHVLKVSLD T++EYYT+GTY T KDRY PD + + GLRFDYG YYASKT
Sbjct: 260 SYDGPNAKHVLKVSLDLTRYEYYTLGTYDTKKDRYRPDGYTPDGWDGLRFDYGNYYASKT 319
Query: 318 FFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLR 377
FFD NRR+LWGW NES +V DD KGWAGIQ IPR + LD SGK LV WP+ EIE LR
Sbjct: 320 FFDDKTNRRILWGWANESDTVQDDTVKGWAGIQLIPRTILLDSSGKQLVFWPIEEIESLR 379
Query: 378 VNQVQVPSKLLKGGSVIEVTGVTAAQV 404
VQ+ ++ ++ G EV G+T AQV
Sbjct: 380 GKNVQMTNQKMEMGQRFEVQGITPAQV 406
|
|
| TAIR|locus:2143099 cwINV6 "6-&1-fructan exohydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 189/364 (51%), Positives = 241/364 (66%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGN--IVWAHSTSKDLINWIPH 103
RT +HFQP +NW+NDPN M YKG YHLFYQ NP + I+W HS S+D++NWI
Sbjct: 17 RTSFHFQPQRNWLNDPNAPMYYKGFYHLFYQNNPLAPEFSRTRIIWGHSVSQDMVNWIQL 76
Query: 104 DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQ-VQNLAVPKNLSDPYLREW 162
+PA+ PS+ DIN CWSGSATILP +P I YTG+D +N+Q V +A PK++SDP LREW
Sbjct: 77 EPALVPSESFDINSCWSGSATILPDGRPVILYTGLDVNNKQQVTVVAEPKDVSDPLLREW 136
Query: 163 VKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGLAILYRSKDF 220
VK NP+M P + N FRDPT AW G D +WRV+IG+K KG+AILYRS DF
Sbjct: 137 VKPKYNPVMVPPSNVPFNC--FRDPTEAWKGQDGKWRVLIGAKEKDTEKGMAILYRSDDF 194
Query: 221 VHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYY 280
V W K PL +GTGMWECPDFFPVS G G+DTS + +HVLK S ++ Y
Sbjct: 195 VQWTKYPVPLLESEGTGMWECPDFFPVSITGKEGVDTSVNNASVRHVLKASFGG--NDCY 252
Query: 281 TVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVND 340
+G YS+ + + D + + LR+D+G +YASK FFD KNRR+ WGWV E+ S D
Sbjct: 253 VIGKYSSETEDFSADYEFTNTSADLRYDHGTFYASKAFFDSVKNRRINWGWVIETDSKED 312
Query: 341 DVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKL-LKGGSVIEVTGV 399
D KKGWAG+ +PR++W+D SGK L+QWP+ EI LR V + K GS E++G+
Sbjct: 313 DFKKGWAGLMTLPREIWMDTSGKKLMQWPIEEINNLRTKSVSLDDCYEFKTGSTFEISGI 372
Query: 400 TAAQ 403
TAAQ
Sbjct: 373 TAAQ 376
|
|
| TAIR|locus:2026177 AT1G62660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 984 (351.4 bits), Expect = 3.9e-99, P = 3.9e-99
Identities = 185/362 (51%), Positives = 242/362 (66%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDP 105
RT +HFQP KNW+NDPNG + YKG YH FYQYNP AVWG+IVW H+ SKDLI+W+
Sbjct: 106 RTAFHFQPEKNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPI 165
Query: 106 AIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKS 165
A+ P Q D NG W+GSAT L + YTG QVQNLA P++ SDP L +WVK
Sbjct: 166 AMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKF 225
Query: 166 PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIK 225
NP++ P I FRDPTTAW +WR+ IGSKINR G++++Y + DF + K
Sbjct: 226 SGNPVLVPPP--GIGAKDFRDPTTAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEK 283
Query: 226 AKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTY 285
+ LH V TGMWEC DF+PVS LNGLDTS GP+ KHV+K S+DDT+ ++Y +GTY
Sbjct: 284 HETLLHQVPNTGMWECVDFYPVSKTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTY 343
Query: 286 STAKDRYVPDEGSVES--DSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVK 343
+ +VPD S++ +GLR+DYGKYYASKTF+D K RR+LWGW+ ES S DV+
Sbjct: 344 DDSNATWVPDNPSIDVGISTGLRYDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQ 403
Query: 344 KGWAGIQAIPRKLWLD-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAA 402
KGW+ +Q IPR + LD ++ K+LVQWPV EI+ LR++ + + G+V+ V +A
Sbjct: 404 KGWSSVQGIPRTVVLDTRTHKNLVQWPVEEIKSLRLSSKKF-DMTIGPGTVVPVDVGSAT 462
Query: 403 QV 404
Q+
Sbjct: 463 QL 464
|
|
| TAIR|locus:2201966 ATBETAFRUCT4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 182/363 (50%), Positives = 246/363 (67%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDP 105
RT +HFQP +NW+NDPNG + YKG YH FYQYNP AVWG+IVW H+ S+DLI+W+ H P
Sbjct: 121 RTAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWV-HLP 179
Query: 106 -AIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVK 164
A+ Q D NG W+GSAT LP + YTG QVQNLA P++ +DP L +WVK
Sbjct: 180 IAMVADQWYDSNGVWTGSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVK 239
Query: 165 SPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWI 224
P NP++ P I FRDPTTAW + +WR+ IGSK+N+ G++++Y + DF +
Sbjct: 240 FPGNPVLVPPP--GILPKDFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYE 297
Query: 225 KAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284
K LH V TGMWEC DF+PVS NGLDTS GP+ KH++K S+DDT+ ++Y VGT
Sbjct: 298 KLDTLLHRVPNTGMWECVDFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGT 357
Query: 285 YSTAKDRYVPDEGSVE--SDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDV 342
Y + ++PD+ +++ + LR+DYGK+YASK+F+D K RRVLW W+ ES S DV
Sbjct: 358 YFDSNGTWIPDDPTIDVGMTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDV 417
Query: 343 KKGWAGIQAIPRKLWLD-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTA 401
+KGW+ +Q IPR + LD K+GK+LVQWPV EI+ LR++ Q ++ GSV+ V +A
Sbjct: 418 QKGWSSLQGIPRTVVLDTKTGKNLVQWPVEEIKSLRLSSKQFDLEV-GPGSVVPVDVGSA 476
Query: 402 AQV 404
AQ+
Sbjct: 477 AQL 479
|
|
| UNIPROTKB|Q9FSV7 1-SST "Sucrose:sucrose 1-fructosyltransferase" [Festuca arundinacea (taxid:4606)] | Back alignment and assigned GO terms |
|---|
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 164/365 (44%), Positives = 223/365 (61%)
Query: 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDP 105
RTG+HFQP K+++NDPNG + Y G YHLFYQYNPKG WGNI WAH+ SKD++NW H P
Sbjct: 122 RTGFHFQPEKHYMNDPNGPVYYGGWYHLFYQYNPKGDSWGNIAWAHAVSKDMVNW-RHLP 180
Query: 106 -AIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVK 164
A+ P Q D NG +GS T+LP + + YTG QVQ LA P + SDP LREW+K
Sbjct: 181 LAMVPDQWYDSNGVLTGSITVLPDGQVILLYTGNTDTLAQVQCLATPADPSDPLLREWIK 240
Query: 165 SPKNPLMAPDAMNQINTSSFRDPTTAWLG-PDKRWRVIIGSKIN--RKGLAILYRSKDFV 221
P NP++ P I FRDP TAW D WR +IGSK + G+ + Y++KDFV
Sbjct: 241 HPANPILYPPP--GIGLKDFRDPLTAWFDHSDNTWRTVIGSKDDDGHAGIILSYKTKDFV 298
Query: 222 HWIKAKHPLH-SVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYY 280
++ +H GTGM+EC D +PV L D P+ VLK S DD +H+YY
Sbjct: 299 NYELMPGNMHRGPDGTGMYECIDLYPVGGNSSEMLGGDD-SPDVLFVLKESSDDERHDYY 357
Query: 281 TVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVND 340
+G + A + + P + ++ GLR+D+GKYYASK+F+D KNRR++W ++ E+ S
Sbjct: 358 ALGRFDAAANIWTPIDQELDLGIGLRYDWGKYYASKSFYDQKKNRRIVWAYIGETDSEQA 417
Query: 341 DVKKGWAGIQAIPRKLWLDKSGK-HLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGV 399
D+ KGWA + IPR + LDK + +L+QWPV E++ LR N + + GSVI +
Sbjct: 418 DITKGWANLMTIPRTVELDKKTRTNLIQWPVEELDTLRRNSTDLSGITVDAGSVIRLPLH 477
Query: 400 TAAQV 404
AQ+
Sbjct: 478 QGAQI 482
|
|
| UNIPROTKB|Q48BH6 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 107/338 (31%), Positives = 157/338 (46%)
Query: 23 LQASHHVYRNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGA 82
L+ +HH ++ +Q YR GYH PP W+NDPNGV+ ++G YH+FYQ++P A
Sbjct: 9 LERAHHALKD-SLAQVI---HDYRPGYHLAPPAGWMNDPNGVVYFRGEYHVFYQHHPFDA 64
Query: 83 VWGNIVWAHSTSKDLINWIPHDP-AIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH 141
WG + W H+ S DL++W H P A+ P D +GC+SGSA + G+ A+ YTG
Sbjct: 65 KWGPMYWGHAKSADLVHW-QHLPIALAPGDDFDQDGCFSGSAVVC-GDTLALIYTGHTWL 122
Query: 142 NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVI 201
L + + + + K+ + D+ Q FRDP W D W +I
Sbjct: 123 GEVGDELLIRQVQCLATSLDGINFVKHGAVI-DSPPQDTIIHFRDPKV-WQ-QDDHWYLI 179
Query: 202 IGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTG-MWECPDFFPVSTYGLNGLDTSDM 260
G+++ + L LYRS D W + +G G MWECPD F L+G D
Sbjct: 180 AGARLGDRPLLPLYRSVDLHAWEFVSYVSSGNEGDGYMWECPDLFR-----LDGRDVLLY 234
Query: 261 GPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFD 320
P + H Y VG + R +E D+G F YA++T
Sbjct: 235 SPQGMPAQGYERLNKFHTGYRVGQIDS--QRQFNGGPFIELDNGHDF-----YAAQTLV- 286
Query: 321 GAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWL 358
A RR++W W++ S W G+ +PR+L L
Sbjct: 287 AADGRRLVWAWLDMWESPTPTATHLWRGMLGLPRELEL 324
|
|
| UNIPROTKB|Q4KBP1 scrB "Sucrose-6-phosphate hydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 111/363 (30%), Positives = 175/363 (48%)
Query: 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD 104
YR YH PP W+NDPNG++ ++G YH+FYQ++P A WG + W H+ S+DL++W H
Sbjct: 32 YRLAYHLAPPVGWMNDPNGLVYFRGEYHVFYQHHPYSAQWGPMHWGHAKSRDLVHW-EHL 90
Query: 105 P-AIYPSQQSDINGCWSGSATILPGEKPAIFYTGI-------DPHN-RQVQNLAVPKNLS 155
P A+ P + D +GC+SGSA ++ + + YTG D + RQVQ LA + +
Sbjct: 91 PIALAPGEAYDRDGCFSGSAVVMD-DVLYLIYTGHTWLGAPGDERSIRQVQCLA---SST 146
Query: 156 DPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215
D S P++ D + FRDP W ++ W + +G++ +LY
Sbjct: 147 DGV----AFSKHGPVI--DRAPEPGIMHFRDPKV-WRRGEQWW-MALGARQGDAPQLLLY 198
Query: 216 RSKDFVHWIKAKHPLHSVKGTG--MWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273
RS D HW + L + + MWECPD F L+G D P L S
Sbjct: 199 RSGDLHHWTYLRCALQGQRESDGYMWECPDLFE-----LDGCDVFLYSPQG---LNPSGY 250
Query: 274 DTKHEYYTVGTYSTAKDR-YVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGW 331
D +++ DR Y + G + D+G +YA++T RR+LW W
Sbjct: 251 DNWNKFQNSYRMGLLDDRGYFSEGGELRE-----LDHGHDFYAAQTLL-APDGRRLLWAW 304
Query: 332 VNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGG 391
++ S + W G ++PR+L ++G+ L P E+ LR +Q + +++ G
Sbjct: 305 MDMWDSPMPSQAQHWCGALSLPREL--SRNGERLRMRPARELAALRQSQRTLAIGVVESG 362
Query: 392 SVI 394
+ I
Sbjct: 363 NCI 365
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q43866 | INV1_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.7171 | 0.9088 | 0.6660 | yes | no |
| Q0JDC6 | INV3_ORYSJ | 3, ., 2, ., 1, ., 2, 6 | 0.5995 | 0.9205 | 0.6723 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| ATBFRUCT1 | ATBFRUCT1; beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds; Encodes a protein with invertase activity. ; Beta-fructofuranosidase that can use sucrose and 1- kestose, and, to a lower extent, neokestose and levan, as substrates, but not inuline (584 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| SUS1 | SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase; Encodes a protein with su [...] (808 aa) | • | • | 0.939 | |||||||
| SUS3 | SUS3 (sucrose synthase 3); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring [...] (809 aa) | • | • | 0.932 | |||||||
| At5g49190 | SUS2 (SUCROSE SYNTHASE 2); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring [...] (807 aa) | • | • | 0.926 | |||||||
| SUS5 | SUS5; UDP-glycosyltransferase/ sucrose synthase; Encodes a protein with sucrose synthase activi [...] (836 aa) | • | • | 0.924 | |||||||
| SUS4 | SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups; Enc [...] (808 aa) | • | • | 0.923 | |||||||
| ATSPS3F | ATSPS3F (sucrose phosphate synthase 3F); sucrose-phosphate synthase/ transferase, transferring [...] (1062 aa) | • | • | 0.904 | |||||||
| BGLU13 | BGLU13 (BETA GLUCOSIDASE 13); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl com [...] (507 aa) | • | 0.899 | ||||||||
| BGLU12 | BGLU12 (BETA GLUCOSIDASE 12); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl com [...] (507 aa) | • | 0.899 | ||||||||
| ATSPS1F | ATSPS1F (sucrose phosphate synthase 1F); sucrose-phosphate synthase/ transferase, transferring [...] (1043 aa) | • | 0.899 | ||||||||
| AtAGAL1 | AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase [...] (410 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 428 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 1e-163 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-153 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 3e-94 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 6e-67 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 6e-52 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 4e-51 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 3e-26 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 6e-16 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 465 bits (1198), Expect = e-163
Identities = 165/361 (45%), Positives = 212/361 (58%), Gaps = 24/361 (6%)
Query: 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYP 109
HFQPPK W+NDPNG++ YKG YHLFYQYNP GAVWGNI W H+ SKDL++W A+ P
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGNIHWGHAVSKDLVHWTHLPVALAP 60
Query: 110 SQQSDINGCWSGSATILPGEKPAIFYTGI--DPHNRQVQNLAVPKNLSDPYLREWVKSPK 167
+ D NG +SGSA I PG ++ YTG N QVQ A SD W K
Sbjct: 61 DEWYDSNGVFSGSAVIDPG-NLSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYDG 119
Query: 168 NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG-SKINRKGLAILYRSKDFVHWIKA 226
NP++ P T FRDP W DK W ++IG S +++G+A+LYRS D +W
Sbjct: 120 NPVLTPP--PGGGTEHFRDPKVFWYDGDK-WYMVIGASDEDKRGIALLYRSTDLKNWTLL 176
Query: 227 KHPLHSVKG--TGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284
LHS+ G GMWECPD FP+ G +KHVLKVS YY VG
Sbjct: 177 SEFLHSLLGDTGGMWECPDLFPLPGE----------GDTSKHVLKVSPQGGSGNYYFVGY 226
Query: 285 YSTAKDRYVPDEGSVESDSGLRFDYG-KYYASKTFFDGAKNRRVLWGWVNESSSVNDDVK 343
+ D + PD+ ++ GLR DYG +YAS+TF+D NRR+L GW+ S DDV
Sbjct: 227 FDGD-DTFTPDDPV-DTGHGLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVP 284
Query: 344 -KGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAA 402
KGWAG ++PR+L LD +G L+QWPV E+E LR N+ ++ + LK GSV E+ G+TA+
Sbjct: 285 TKGWAGALSLPRELTLDLTGGKLLQWPVEELESLR-NKKELLNLTLKNGSVTELLGLTAS 343
Query: 403 Q 403
Sbjct: 344 G 344
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 435 bits (1121), Expect = e-153
Identities = 146/328 (44%), Positives = 184/328 (56%), Gaps = 31/328 (9%)
Query: 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYP 109
HFQPPK W+NDPNG++ YKG YHLFYQYNP GAVWGN W H+ SKDL++W A+ P
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGNKHWGHAVSKDLVHWEHLPVALAP 60
Query: 110 SQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNP 169
+ D NGC+SGSA +LP + YTG + QVQ LA + R W K P NP
Sbjct: 61 DEWYDSNGCFSGSAVVLPD-NLVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGNP 115
Query: 170 LMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGLAILYRSKDFVHWIKAKH 228
++ T FRDP AW PD +W +++G++ N ++G A+LYRSKD +W
Sbjct: 116 VIINPPPG--YTKHFRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLGE 173
Query: 229 PLHSV-KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD---DTKHEYYTVGT 284
LHSV G GMWECPD FPV KHVLK S + +YY +GT
Sbjct: 174 LLHSVPDGGGMWECPDLFPVDG---------KDNGPVKHVLKFSPQGYQNGYQDYYFIGT 224
Query: 285 YSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDV- 342
+ D + P R DYG +YAS+TF+D RR+L GW+ E S DDV
Sbjct: 225 FDADGDTFTP-------PDEQRLDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDVP 277
Query: 343 -KKGWAGIQAIPRKLWLDKSGKHLVQWP 369
KGWAG +IPR+L L G L+QWP
Sbjct: 278 TTKGWAGALSIPRELTLKDEGGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 284 bits (730), Expect = 3e-94
Identities = 115/330 (34%), Positives = 151/330 (45%), Gaps = 45/330 (13%)
Query: 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDI 115
W+NDPNG++ + G YHLFYQYNP G VWGN+ W H+TSKDL++W A+ P D
Sbjct: 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDS 60
Query: 116 NGCWSGSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMA 172
GC+SGSA + K +FYTG RQ Q LA S R + K NP++
Sbjct: 61 GGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAY----STDDGRTFTKYEGNPVIP 116
Query: 173 PDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPL- 230
P T+ FRDP W D +W +++G+ + G +LYRS D +W + L
Sbjct: 117 PP---DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNW-EYLGELL 170
Query: 231 -HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL------DDTKHEYYTVG 283
MWECPD FP + K VL S + Y VG
Sbjct: 171 TSLGDFGYMWECPDLFP-------------LDVEGKWVLIFSPQGLEPEGNGSGTGYLVG 217
Query: 284 TYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDV 342
+ + E DYG +YA +TF D RR+L GW+
Sbjct: 218 DFDGTTFTFDHTE-------FGELDYGFDFYAPQTFVD-PDGRRILIGWMGNWDYEYPTP 269
Query: 343 KKGWAGIQAIPRKLWLDKSGKHLVQWPVVE 372
+ GWAG +PR+L L K G L Q PV E
Sbjct: 270 EDGWAGCLTLPRELSL-KDGGRLYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 220 bits (563), Expect = 6e-67
Identities = 119/385 (30%), Positives = 179/385 (46%), Gaps = 56/385 (14%)
Query: 32 NLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAH 91
L+ + PYR YHF PP W+NDPNG++ + G YHLFYQYNP GA G W H
Sbjct: 15 ELEKISESVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGH 74
Query: 92 STSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG-IDPHN---RQVQN 147
+ SKDL++W A+ P D +GC+SGSA ++ ++FYTG + N +Q Q
Sbjct: 75 AVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDSNGIRQQTQC 133
Query: 148 LAVPKNLSDPYLREWVKSPKNPLM-APDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK- 205
+A ++ + K NP++ P+ T FRDP W +W +++G++
Sbjct: 134 IAYSEDGGT-----FEKYSGNPIIDQPEGY----TPHFRDPKVVW-DEGGKWWMMLGAQG 183
Query: 206 INRKGLAILYRSKDFVHWIKAKHPLHSVKGTG-MWECPDFFP----------VSTYGLNG 254
+ KG +LY S D +W G G MWECPD F +NG
Sbjct: 184 EDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGEDVLLFWPQGLSING 243
Query: 255 LDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YY 313
+ ++ + Y VG + E ++ D+G +Y
Sbjct: 244 GEYDNIYQSG---------------YFVGDFD-------GKEFKLDDGQFRELDFGFDFY 281
Query: 314 ASKTFFDGAKNRRVLWGWVN--ESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVV 371
A +TF D RR+L GW+ + ++ + +GW G +PR+L L + GK L Q PV
Sbjct: 282 APQTFLD-PDGRRILIGWMGNWDYTNNYPTIDEGWRGAMTLPRELTL-EDGK-LYQTPVR 338
Query: 372 EIEKLRVNQVQVPSKLLKGGSVIEV 396
E+E LR + + L G S +E+
Sbjct: 339 ELESLRKPEEAAHNTTLSGNSKLEL 363
|
Length = 486 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 175 bits (446), Expect = 6e-52
Identities = 80/313 (25%), Positives = 113/313 (36%), Gaps = 41/313 (13%)
Query: 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI----YPSQQSD 114
DPN ++ Y G Y++F+ + K GN AH+TSKDL+NW H A+ D
Sbjct: 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKD 56
Query: 115 INGCWSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAP 173
G W+ S + K ++YT + N+Q +A ++ + P+ + P
Sbjct: 57 SGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYI-----GGPVLP 111
Query: 174 DAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGLAILYRSKDFVHWIKAKHPL-- 230
D + S+FRDP D +W ++ GS + G LY S D W K L
Sbjct: 112 DNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELLI 170
Query: 231 HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTK------HEYYTVGT 284
+G E P N K+ L S++ T Y
Sbjct: 171 SEGEGGKQIEGPGLLKK---------------NGKYYLFYSINGTGRVDSTYSIGYARSE 215
Query: 285 YSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKK 344
T D S +G Y + F D A R VL D
Sbjct: 216 SDTGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFND-AGGRVVLVYHAYNVQYA-DAPTY 273
Query: 345 GWAGIQAIPRKLW 357
GW AIPR LW
Sbjct: 274 GWGRSLAIPRLLW 286
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 4e-51
Identities = 112/369 (30%), Positives = 158/369 (42%), Gaps = 72/369 (19%)
Query: 44 PYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH 103
+R +H QP +NDPNG++ +KG YHLFYQ+ P G V G W H TSKDL++W
Sbjct: 12 EWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDE 71
Query: 104 DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG----IDPHNRQVQNLAV-PKNLSDPY 158
A+ P D +GC+SGSA G + + YTG D + Q LA +
Sbjct: 72 GVALAPDDPYDSHGCYSGSAVDNNG-QLTLMYTGNVRDSDWNRESYQCLATMDDDGH--- 127
Query: 159 LREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK-INRKGLAILYRS 217
+ ++ T+ FRDP W W ++IG++ KG +LYRS
Sbjct: 128 ----FEKFGIVVIELPPAGY--TAHFRDPKV-WKHNGH-WYMVIGAQTETEKGSILLYRS 179
Query: 218 KDFVHWIKAKHPLHSVKGTG---------MWECPDFFPVSTYGLNGLDTSDMGPNTKHVL 268
KD +W + + G G MWECPD F + + + VL
Sbjct: 180 KDLKNWTF----VGEILGDGQNGLDDRGYMWECPDLFSL---------------DGQDVL 220
Query: 269 KVS---LDDTKHEY-------YTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTF 318
S LD + ++Y Y VG + E D G F YA +TF
Sbjct: 221 LFSPQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTEFHELDYGFDF-----YAPQTF 275
Query: 319 FDGAKNRRVLWGWV----NESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIE 374
RR+L W+ + + D GWA +PR+L L K GK LVQ P+ E++
Sbjct: 276 LA-PDGRRILVAWMGLPEIDYPTDRD----GWAHCMTLPRELTL-KDGK-LVQTPLRELK 328
Query: 375 KLRVNQVQV 383
LR +
Sbjct: 329 ALRTEEHIN 337
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 3e-26
Identities = 78/293 (26%), Positives = 119/293 (40%), Gaps = 50/293 (17%)
Query: 69 GIYHLFYQYNPKGAV--WGNIVWAHSTSKDLINWIPHDPAIYPSQQSDIN-GCWSGSATI 125
G +H+FY ++P+ W+ T+KDL+N+ H AI D + +GS I
Sbjct: 10 GTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSV-I 68
Query: 126 LPGEKPAIFYTG--IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSS 183
FYTG +D +QV A +L W K P+ L+A +
Sbjct: 69 KGEGTYHAFYTGHNLDGKPKQVVMHATSDDLI-----TWTKDPEFILIAD--GEGYEKND 121
Query: 184 FRDPTTAWLGPDKRWRVIIGS-----KINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGM 238
+RDP W + + +++ + NR+G L+ SKD +W + + P ++ M
Sbjct: 122 WRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNW-EYEEPFYAPGLYFM 180
Query: 239 WECPDFFPVSTYGLNG---LDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPD 295
ECPD F + L S+ N K +VS S PD
Sbjct: 181 PECPDLFK-----MGDWWYLVYSEFSENRKTHYRVSK-------------SPFGPWRAPD 222
Query: 296 EGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAG 348
+ + FD +YA+KT DG RR L+GWV + +DD W G
Sbjct: 223 DDT--------FDGRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGG 265
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 77.5 bits (191), Expect = 6e-16
Identities = 68/278 (24%), Positives = 93/278 (33%), Gaps = 40/278 (14%)
Query: 68 KGIYHLFYQYNPKGAVWGNIVW-AHSTSKDLINWIPHDPAIYPSQQS--DINGCWSGSAT 124
G YHLFY P+G GN ++S D W + P D G W+ S
Sbjct: 13 VGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVV 72
Query: 125 ILPGEKPAIFYTGIDPHNRQVQN--LAVPKNLSDPYLREWVKSPKNPLMA--PDAMNQI- 179
P +FYTG D VQ LA K+ L W K NP+
Sbjct: 73 RDPDGTYRMFYTGYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNPGPW 127
Query: 180 NTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI-LYRSKDFVHWIKAKHPLHSVKGT-- 236
+ ++RDP WR+ G++ + AI L S D +HW P G
Sbjct: 128 DDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDD 187
Query: 237 GMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVS-LDDTKHEYYTVGTYSTAKDRYVPD 295
G E P + + + L S ++ Y VGT R +
Sbjct: 188 GQLEVPQVVKI---------------DGRWYLLYSGRNEDAKTGYRVGTALFGPGRPLTL 232
Query: 296 EGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVN 333
D YA++ DG VL G+V
Sbjct: 233 AE--------LLDRTDLYAARPVPDGEGGGVVLEGFVQ 262
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 428 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.95 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.91 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.84 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.83 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.82 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.8 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.75 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.7 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.67 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.65 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.61 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.6 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.56 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.44 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.41 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.41 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.41 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.38 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 99.33 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 99.32 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.28 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.26 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 99.21 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 99.2 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 99.13 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.12 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 99.11 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 99.08 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.96 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.92 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.9 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.89 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 98.71 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.66 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.63 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.63 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.62 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.6 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.58 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.58 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.46 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.46 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 98.38 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 98.27 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.23 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.23 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.22 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 98.07 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 98.05 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 98.05 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.02 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 97.92 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 97.84 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 97.73 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 97.71 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.69 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 97.65 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.61 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.59 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.5 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 97.38 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 97.09 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 97.05 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 96.91 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 96.82 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 96.48 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 95.99 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 94.41 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 93.35 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 91.86 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 87.29 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 85.15 | |
| PF13810 | 316 | DUF4185: Domain of unknown function (DUF4185) | 84.34 | |
| COG3940 | 324 | Predicted beta-xylosidase [General function predic | 83.05 | |
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 81.75 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-90 Score=691.24 Aligned_cols=402 Identities=59% Similarity=1.050 Sum_probs=372.9
Q ss_pred hHHHHHHHHHHHhhceeeeecccccCcCcccc-CCCCCCCCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCC
Q 014220 5 YLSLFLFFALFLGHGVVELQASHHVYRNLQTS-QSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAV 83 (428)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~ 83 (428)
-++|+|..+|+|.|+|.-+.+.|+.|..|+.. +....+.++||.|||+|++|||||| +|++|.|||||||||+++.
T Consensus 8 ~~~l~l~~~~~~~~~vk~~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gav 84 (571)
T KOG0228|consen 8 LVLLLLLVTLNLTNYVKGLDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAV 84 (571)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCce
Confidence 46788999999999999999999999999665 4567788999999999999999998 7899999999999999999
Q ss_pred CCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeE
Q 014220 84 WGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWV 163 (428)
Q Consensus 84 ~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~ 163 (428)
||+.+||||+|+||+||+.+|+||.|++++|..|||||||+++++|++++||||.+.+.+|.|.+|+..|.+|+.|+.|.
T Consensus 85 wg~ivWGHavSkDLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~ 164 (571)
T KOG0228|consen 85 WGNIVWGHAVSKDLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWS 164 (571)
T ss_pred eeeeEeeeecchhhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheee
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred ecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCc
Q 014220 164 KSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPD 243 (428)
Q Consensus 164 k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPd 243 (428)
|.++||++.++.-.++....||||+++|.+++|+|+|++|+.++++|.+.+|+|+|+++|+..+.++.....++||||||
T Consensus 165 k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPd 244 (571)
T KOG0228|consen 165 KDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPD 244 (571)
T ss_pred cCCCceeeccccccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCC
Confidence 99999999765224567789999999999999999999999988899999999999999999888888888899999999
Q ss_pred eEEeccCCCCCccccCCCCCceeEEEEeeCCCCeeeEEEEEeeCCCCcccCCCCCccCCCccccccCCCcccceEeeCCC
Q 014220 244 FFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAK 323 (428)
Q Consensus 244 lf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~fYA~qtf~d~~~ 323 (428)
||++..+|++++..+..+...|||+..|..+++.++|+||+||+++.+|+|+..+.+.....+.|||.|||+|||.|..+
T Consensus 245 ffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~ 324 (571)
T KOG0228|consen 245 FFPVSITGTDGLDWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVK 324 (571)
T ss_pred cEEecccCCCCceEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccC
Confidence 99999999999998877766799999999888899999999999888999998776654566899999999999999989
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCcccccccEEEEEec-CCCeEEecchHHHHHhhhcceeccceEeeCCcEEEEcCccce
Q 014220 324 NRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-SGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAA 402 (428)
Q Consensus 324 gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~-dG~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (428)
+|||+|||++++++..+...+||+|.|++||+++|+. .|+.|.|.|++|++.||...+...+..+.++..+++.++++.
T Consensus 325 ~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~ 404 (571)
T KOG0228|consen 325 GRRILWGWASESDYTNDDPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAA 404 (571)
T ss_pred CcEEEEEecccCcccccchhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccc
Confidence 9999999999999988889999999999999999997 788999999999999999999888888889999999999999
Q ss_pred EEEEEEE
Q 014220 403 QVSSCLY 409 (428)
Q Consensus 403 ~~~~~~~ 409 (428)
|+|+|+.
T Consensus 405 q~dvev~ 411 (571)
T KOG0228|consen 405 QADVEVT 411 (571)
T ss_pred cccceEE
Confidence 9987776
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-85 Score=669.38 Aligned_cols=326 Identities=34% Similarity=0.661 Sum_probs=280.3
Q ss_pred cCCCCCCCCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccC
Q 014220 36 SQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDI 115 (428)
Q Consensus 36 ~~~~~~~~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~ 115 (428)
...+...++|||.|||+||.||||||||++|++|+|||||||+|.++.||+++||||+|+||+||+++|+||.|+.++|.
T Consensus 19 ~~~~~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~ 98 (486)
T COG1621 19 ISESVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDS 98 (486)
T ss_pred hhhhccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCcccc
Confidence 33456669999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeeEEEcCCCceEEEEcccCC----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEE
Q 014220 116 NGCWSGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAW 191 (428)
Q Consensus 116 ~gv~SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~ 191 (428)
+||||||||++ +|...+||||+.+ .+.+.|++|+|+|+ .+|+|+.+|||+..| +++ +.+||||+|+|
T Consensus 99 ~g~ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p--~~~-t~hFRDPKv~w 169 (486)
T COG1621 99 HGCYSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQP--EGY-TPHFRDPKVVW 169 (486)
T ss_pred CCceeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCC--Ccc-cccCCCCcccc
Confidence 99999999984 8999999999865 26779999999995 578887778999887 665 89999999888
Q ss_pred ECCCCeEEEEEeeec-CCccEEEEEEeCCCCCcEEccccccc-CCCCCeeecCceEEeccCCCCCccccCCCCCceeEEE
Q 014220 192 LGPDKRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269 (428)
Q Consensus 192 ~~~~g~y~Mv~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~ 269 (428)
. ++++|||++||+. +..|+|++|+|+||++|++.+++... ...++||||||||+|+.. +.+ .+|++.
T Consensus 170 ~-~~~~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~~--------~~~pqg 238 (486)
T COG1621 170 D-EGGKWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DVL--------LFWPQG 238 (486)
T ss_pred c-CCCcEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--Cce--------EEccee
Confidence 7 7889999999987 45899999999999999999875555 345679999999999943 332 466666
Q ss_pred EeeCC-----CCeeeEEEEEeeCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCC--CCC
Q 014220 270 VSLDD-----TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV--NDD 341 (428)
Q Consensus 270 ~s~~~-----~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~--~~~ 341 (428)
.+.++ ...+.|++|+||+. +|.+... .+++||+|+ |||+|||.++ +||||++|||++|+.. .++
T Consensus 239 ~~~~~~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT 310 (486)
T COG1621 239 LSINGGEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPT 310 (486)
T ss_pred eecCCCcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCc
Confidence 66543 35689999999987 5655542 367999999 9999999986 7999999999999976 566
Q ss_pred CCCCCcccccccEEEEEecCCCeEEecchHHHHHhhhcceeccceEeeCC
Q 014220 342 VKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGG 391 (428)
Q Consensus 342 ~~~gW~g~lslPR~l~l~~dG~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~ 391 (428)
...+|+|||||||||+|+ +| +|+|+|++||++||.++....+..+++.
T Consensus 311 ~~~~w~~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~ 358 (486)
T COG1621 311 IDEGWRGAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN 358 (486)
T ss_pred cccCcCccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc
Confidence 678999999999999996 57 6999999999999999666666555443
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-77 Score=621.41 Aligned_cols=308 Identities=33% Similarity=0.590 Sum_probs=265.0
Q ss_pred CCCCCCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCe
Q 014220 39 TSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGC 118 (428)
Q Consensus 39 ~~~~~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv 118 (428)
...+++|||+|||+|+.||||||||+++++|+||||||++|.++.||+++||||+|+||+||+++++||.|++.+|+.||
T Consensus 7 ~~~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~ 86 (445)
T TIGR01322 7 RALQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGC 86 (445)
T ss_pred hhccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCce
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeEEEcCCCceEEEEcccCC----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECC
Q 014220 119 WSGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP 194 (428)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~ 194 (428)
|||||++ .+|+++|||||+.. ...+.|++|+|.|+ .+|+|.. +|||.++ +.....+||||+|+ + .
T Consensus 87 ~sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~--~~~~~~~fRDP~V~-~-~ 155 (445)
T TIGR01322 87 YSGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELP--PAGYTAHFRDPKVW-K-H 155 (445)
T ss_pred EECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCC--CCCCcCcCCCCcEE-e-E
Confidence 9999987 58999999999753 24578999999885 5899974 5999765 33345789999974 4 3
Q ss_pred CCeEEEEEeeec-CCccEEEEEEeCCCCCcEEcccccccC-----CCCCeeecCceEEeccCCCCCccccCCCCCceeEE
Q 014220 195 DKRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHSV-----KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVL 268 (428)
Q Consensus 195 ~g~y~Mv~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~-----~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl 268 (428)
+|+|||++|++. +..|++++|+|+||++|++.+.+.... ..+.|||||+||+|+ | ||||
T Consensus 156 ~g~~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL 220 (445)
T TIGR01322 156 NGHWYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVL 220 (445)
T ss_pred CCEEEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEE
Confidence 689999999986 456899999999999999987544332 235699999999997 4 7888
Q ss_pred EEeeCCC----------CeeeEEEEEeeCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCC
Q 014220 269 KVSLDDT----------KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSS 337 (428)
Q Consensus 269 ~~s~~~~----------~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~ 337 (428)
++|.++. ..+.|++|+||.++.+|+|++. .+++|+|+ |||+|||.++ +||||+||||++++.
T Consensus 221 ~~s~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~ 293 (445)
T TIGR01322 221 LFSPQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEI 293 (445)
T ss_pred EEeccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCcc
Confidence 8886541 2367999999987789987643 46899998 9999999986 699999999999987
Q ss_pred CCCCCCCCCcccccccEEEEEecCCCeEEecchHHHHHhhhcce
Q 014220 338 VNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQV 381 (428)
Q Consensus 338 ~~~~~~~gW~g~lslPR~l~l~~dG~~L~q~Pv~el~~Lr~~~~ 381 (428)
..++.+.+|+|+|||||+|+|+ +| +|+|+|++||++||.+..
T Consensus 294 ~~~~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~ 335 (445)
T TIGR01322 294 DYPTDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEH 335 (445)
T ss_pred CCCCccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCcc
Confidence 6666778999999999999998 67 699999999999998654
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-75 Score=607.27 Aligned_cols=309 Identities=48% Similarity=0.911 Sum_probs=257.1
Q ss_pred cccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCC
Q 014220 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (428)
Q Consensus 50 H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg 129 (428)
||+|+.||||||||++|++|+||||||++|.++.||+++||||+|+||+||+++++||.|+..+|+.|||||||+++ +|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-PG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999985 77
Q ss_pred ceEEEEcccCCC------CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEe
Q 014220 130 KPAIFYTGIDPH------NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (428)
Q Consensus 130 ~~~l~YTg~~~~------~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~g 203 (428)
++++||||+... ..+.|.+|.+++. +.+|+|+++|||+.++ ++....+||||+|+|. ++++|||++|
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d----~~~w~k~~~~Pvi~~~--p~~~~~~fRDP~Vf~~-~~~~~~m~~g 152 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL----GGTWTKYPGNPVLVPP--PGIGTEHFRDPKVFWY-DGDKWYMVIG 152 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC----CCeeEECCCCcEEeCC--CCCCCCCcCCCCccEE-CCCEEEEEEE
Confidence 799999997421 2233434444432 4899998779999776 5556789999998776 4479999999
Q ss_pred eec-CCccEEEEEEeCCCCCcEEccccccc--CCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCeeeE
Q 014220 204 SKI-NRKGLAILYRSKDFVHWIKAKHPLHS--VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYY 280 (428)
Q Consensus 204 a~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~--~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~Y 280 (428)
++. ++.|+|++|+|+||++|++.+.++.. ...+.||||||||+|+.+| .+.||||++|+++...+.|
T Consensus 153 ~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y 222 (437)
T smart00640 153 ASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYY 222 (437)
T ss_pred EEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEE
Confidence 876 45799999999999999998865443 2345899999999998543 2369999999987678899
Q ss_pred EEEEeeCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCC-CCCCCCCCcccccccEEEEE
Q 014220 281 TVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV-NDDVKKGWAGIQAIPRKLWL 358 (428)
Q Consensus 281 ~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~-~~~~~~gW~g~lslPR~l~l 358 (428)
.+|.++++ .+|+|+.... ....+++|+|+ |||+|||.+++++|+||||||++++.. ......+|+|+|||||+|+|
T Consensus 223 ~~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l 300 (437)
T smart00640 223 FVGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTL 300 (437)
T ss_pred EEEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEE
Confidence 99999863 4798875421 12345899998 999999998755699999999999742 22233899999999999999
Q ss_pred e-cCCCeEEecchHHHHHhhhc
Q 014220 359 D-KSGKHLVQWPVVEIEKLRVN 379 (428)
Q Consensus 359 ~-~dG~~L~q~Pv~el~~Lr~~ 379 (428)
+ ++| +|+|+|++||++||..
T Consensus 301 ~~~~g-~L~~~Pv~el~~lr~~ 321 (437)
T smart00640 301 DKTGG-KLLQWPVEELESLRNV 321 (437)
T ss_pred EecCC-EEEEeecHHHHhhhCc
Confidence 5 567 6999999999999954
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-77 Score=590.55 Aligned_cols=300 Identities=41% Similarity=0.814 Sum_probs=247.2
Q ss_pred cccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCC
Q 014220 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (428)
Q Consensus 50 H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg 129 (428)
||+|+.||||||||++|++|+||||||++|+++.|++++||||+|+|||||+++++||.|++.+|+.||||||++++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986 66
Q ss_pred ceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecC-CCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCC
Q 014220 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSP-KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (428)
Q Consensus 130 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~-~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~ 208 (428)
++++||||+.+...+.|++|+|.|.+ .+|+|++ +||||..+ +.....+||||+|+|++ +++|+|++|++..+
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~--p~~~~~~~RDP~v~~~~-~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEP--PPGDTTDFRDPKVFWRE-DGRWYMLLGAGRDG 152 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESS--STTSCTSEEEEEEEEEC-TTEEEEEEEEEETT
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEec--ccCCCCccccCeEEEec-CCEEEEEEeccccC
Confidence 89999999987568999999996653 8999997 49999753 22267899999988885 69999999999888
Q ss_pred ccEEEEEEeCCCCCcEEcccccccCC-CCCeeecCceEEeccCCCCCccccCCCCCceeEEEEee----CCCCeeeEEEE
Q 014220 209 KGLAILYRSKDFVHWIKAKHPLHSVK-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL----DDTKHEYYTVG 283 (428)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~----~~~~~~~Y~vG 283 (428)
.|+|++|+|+||++|++.+.+..... .+.||||||||+|+..+.. ....+|||++|. .....+.|++|
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~~-------~~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGDG-------TGKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTSS-------SEEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCcccc-------cceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999886544432 4789999999999954210 112357899998 34578999999
Q ss_pred EeeCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCCC-CCCCCCCcccccccEEEEEecC
Q 014220 284 TYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVN-DDVKKGWAGIQAIPRKLWLDKS 361 (428)
Q Consensus 284 ~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~~-~~~~~gW~g~lslPR~l~l~~d 361 (428)
++|..+++|+++.. ..+++|+|+ |||+|+|.+++++|||+||||++++... ...+.+|+|+|||||+|+|+++
T Consensus 226 ~~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~ 300 (308)
T PF00251_consen 226 DFDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDE 300 (308)
T ss_dssp EEETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETT
T ss_pred EecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEEC
Confidence 99877789987621 368999999 9999999997555999999999998742 2236899999999999999764
Q ss_pred CCeEEecc
Q 014220 362 GKHLVQWP 369 (428)
Q Consensus 362 G~~L~q~P 369 (428)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 44799988
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-68 Score=523.34 Aligned_cols=286 Identities=40% Similarity=0.725 Sum_probs=245.2
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (428)
||||||||++|++|+||||||++|.++.|++++||||+|+||+||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 79999999999999999999999999999999999999999999999999999988889999999999986449999999
Q ss_pred cccCC---CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC-CccE
Q 014220 136 TGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGL 211 (428)
Q Consensus 136 Tg~~~---~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~-~~G~ 211 (428)
||+.. ...+.|++|+|+|. +.+|+|...+|++.++ .....+||||+|++. +|+|+|++|++.. ..|+
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~~---~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~ 151 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPPP---DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGR 151 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcCC---CCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcE
Confidence 99864 46789999999853 3899999888888633 235678999997655 4899999999863 5789
Q ss_pred EEEEEeCCCCCcEEccccc-ccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCC------CeeeEEEEE
Q 014220 212 AILYRSKDFVHWIKAKHPL-HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT------KHEYYTVGT 284 (428)
Q Consensus 212 i~ly~S~Dl~~W~~~~~~l-~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~------~~~~Y~vG~ 284 (428)
|.+|+|+||++|++.+... .....+.|||||+||++++. .||||++|.+.. ..+.|++|+
T Consensus 152 i~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~ 218 (298)
T cd08996 152 ILLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGD 218 (298)
T ss_pred EEEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEE
Confidence 9999999999999986432 23345679999999999842 399999998743 457999999
Q ss_pred eeCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccEEEEEecCCC
Q 014220 285 YSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK 363 (428)
Q Consensus 285 ~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~dG~ 363 (428)
+++. .|+++. ...+++|+|+ |||+|+|.++ +||+|+||||++++...+..+.+|+|+|||||+|+|++++
T Consensus 219 ~~~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~- 289 (298)
T cd08996 219 FDGT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG- 289 (298)
T ss_pred EECC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-
Confidence 9975 565541 1257899998 9999999986 7999999999999987777889999999999999999866
Q ss_pred eEEecchHH
Q 014220 364 HLVQWPVVE 372 (428)
Q Consensus 364 ~L~q~Pv~e 372 (428)
+|.|+|++|
T Consensus 290 ~l~~~P~~e 298 (298)
T cd08996 290 RLYQRPVRE 298 (298)
T ss_pred EEEEEeCCC
Confidence 799999976
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-56 Score=435.08 Aligned_cols=267 Identities=28% Similarity=0.480 Sum_probs=221.6
Q ss_pred cCCcceEEECCEEEEEEeeCCCCCCC--CCcEEEEEEeCCCCCCccCCCCCCCC-CCccCCCeEeeeEEEcCCCceEEEE
Q 014220 59 NDPNGVMIYKGIYHLFYQYNPKGAVW--GNIVWAHSTSKDLINWIPHDPAIYPS-QQSDINGCWSGSATILPGEKPAIFY 135 (428)
Q Consensus 59 nDPng~~~~~G~YHlFYq~~p~~~~~--g~~~Wgha~S~Dlv~W~~~~~al~P~-~~~D~~gv~SGsav~~~dg~~~l~Y 135 (428)
.|| .++|++|+||||||++|.+..| ++++||||+|+||+||+++++||.|. ..+|+.|||||||++ .+|+++|||
T Consensus 1 ~d~-~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDP-MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCc-cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 488 6899999999999999998887 89999999999999999999999884 567789999999987 489999999
Q ss_pred cccCCC--CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-----CC
Q 014220 136 TGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----NR 208 (428)
Q Consensus 136 Tg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-----~~ 208 (428)
||+... ..+.|++|+|.|+ .+|+|...+||+.++ +++...+||||+|++.+++|+|+|+++++. +.
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~--~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~ 151 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADG--EGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNR 151 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCc--cccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCC
Confidence 998642 5678999999874 799998778988644 455557899999876545799999999876 35
Q ss_pred ccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC-CCeeeEEEEEeeC
Q 014220 209 KGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD-TKHEYYTVGTYST 287 (428)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~-~~~~~Y~vG~~d~ 287 (428)
.|+|.+|+|+||++|++.+ ++.......|||||++|+++ | +|+|++|.+. .....|++|+..
T Consensus 152 ~g~i~~~~S~Dl~~W~~~~-~~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~- 214 (280)
T cd08995 152 RGCIALFTSKDLKNWEYEE-PFYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP- 214 (280)
T ss_pred CeEEEEEEeCCcCcceecC-ceecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC-
Confidence 7899999999999999876 45544456799999999997 4 8999999863 345789999622
Q ss_pred CCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccEEEEEecCCC
Q 014220 288 AKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK 363 (428)
Q Consensus 288 ~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~dG~ 363 (428)
.+.|.... ...|| |+ |||+|||.++ |||||||||++++...++.+.||+|||| ||+|.+.+||.
T Consensus 215 -~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g~ 279 (280)
T cd08995 215 -FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDGT 279 (280)
T ss_pred -CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCCc
Confidence 34553322 23589 98 9999999985 8999999999999877777899999998 67888888884
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=310.75 Aligned_cols=242 Identities=27% Similarity=0.399 Sum_probs=190.9
Q ss_pred CCcceEEECCEEEEEEeeCCCCCCCC-CcEEEEEEeCCCCCCccCCCCC--CCCCCccCCCeEeeeEEEcCCCceEEEEc
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHDPAI--YPSQQSDINGCWSGSATILPGEKPAIFYT 136 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~al--~P~~~~D~~gv~SGsav~~~dg~~~l~YT 136 (428)
||+.+. |+||||||++|.+..++ ...|+||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 555443 89999999999876644 4568999999999999999887 55667888999999999864499999999
Q ss_pred ccCC--CCcceEEEEEEcCCCCCccceeEecCCCcee-----cCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-CC
Q 014220 137 GIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-----APDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NR 208 (428)
Q Consensus 137 g~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi-----~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-~~ 208 (428)
+... ...+.+++|+|+|+ .+|+|.+.+|++ ..+ ......++|||+|++.+.+|+|+|++++.. ..
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~--~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~ 157 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNP--GPWDDHAWRDPAVVRDEEGGGWRMYYGARDADE 157 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCC--CCcccccccccEEEEECCCCEEEEEEEeEccCC
Confidence 9863 45788999999884 789998766653 122 223456899999876533489999999876 34
Q ss_pred ccEEEEEEeCCCCCcEEccccc--ccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC-CCeeeEEEEEe
Q 014220 209 KGLAILYRSKDFVHWIKAKHPL--HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD-TKHEYYTVGTY 285 (428)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l--~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~-~~~~~Y~vG~~ 285 (428)
.++|.+++|+|+++|++.+... .......++|||++|+++ | +|+|+++... .....|.+|.+
T Consensus 158 ~~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~ 222 (276)
T cd08979 158 RGAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTA 222 (276)
T ss_pred CcEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEec
Confidence 6889999999999999876531 222345799999999997 4 8999998764 45688999987
Q ss_pred eCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCC
Q 014220 286 STAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNES 335 (428)
Q Consensus 286 d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~ 335 (428)
+.. .++|.. ...+|.|. |||+|++.+.+++|++++|||.++
T Consensus 223 ~~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 223 LFG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred ccC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 654 455542 35799999 999999987546999999999987
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=292.25 Aligned_cols=270 Identities=29% Similarity=0.444 Sum_probs=204.2
Q ss_pred cCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCC----CCCCccCCCeEeeeEEEcCCCceEEE
Q 014220 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSATILPGEKPAIF 134 (428)
Q Consensus 59 nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~----P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (428)
|||+ +++++|+||||||++|.+ +.++|+|++|+||+||++.+.++. |...++..++|+|+++...+|+++||
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 899999999999999865 678999999999999999998874 66667788999999998644999999
Q ss_pred EcccCC-CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-CCccEE
Q 014220 135 YTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLA 212 (428)
Q Consensus 135 YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-~~~G~i 212 (428)
||+... ...+.+++|+|+|.. ..|++...+|++... ........+|||+|+ .+++|+|||++++.. ...+.|
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~-~~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDN-PPAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCC-CCccccccccCCeEE-EcCCCCEEEEEccccCCCCCeE
Confidence 999753 356789999998864 356665455655322 022244678999975 446699999999865 245689
Q ss_pred EEEEeCCCCCcEEcccc--cccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC------CCeeeEEEEE
Q 014220 213 ILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD------TKHEYYTVGT 284 (428)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~------~~~~~Y~vG~ 284 (428)
.+++|+|+.+|+..+.+ ........++|||++|+++ | +|+|++|... .....|++++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999876543 1223346799999999997 5 8899888754 3456788876
Q ss_pred eeCCCCcccCCCCCc-cCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccEEEE
Q 014220 285 YSTAKDRYVPDEGSV-ESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLW 357 (428)
Q Consensus 285 ~d~~~~~f~p~~~~~-~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~ 357 (428)
.+ .+.|++..... ........|.+. +||+++|.++ +||++|++|+.+++.... ...+|+++|+|||+++
T Consensus 216 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 216 SD--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CC--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 43 35676543210 001123467777 9999999986 799999999999875333 5579999999999873
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-26 Score=225.10 Aligned_cols=194 Identities=22% Similarity=0.264 Sum_probs=137.3
Q ss_pred CCcceEE-ECCEEEEEEeeCCCC----CCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 014220 60 DPNGVMI-YKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (428)
Q Consensus 60 DPng~~~-~~G~YHlFYq~~p~~----~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (428)
|..|-+. ++|..-+|++..|.. +.|+.++|+|++|+||++|++.+. |.|+..+|..+||||||++..||+++||
T Consensus 9 d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~~-l~p~~~~d~~g~wSGsa~~~~dg~~~lf 87 (349)
T cd08997 9 DRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGGK-VFPDGLSPGSREWSGSATLDDDGTVQLF 87 (349)
T ss_pred CCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCCc-cCCCCcccCCCeEcceEEEeCCCeEEEE
Confidence 4444333 566644999887754 468899999999999999999554 6678889999999999998667999999
Q ss_pred EcccCC----CCcceEEEEEEcCCCCCccceeEecC--CCceecCCC------------CCCCCCCCccCCeEEEECCCC
Q 014220 135 YTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSP--KNPLMAPDA------------MNQINTSSFRDPTTAWLGPDK 196 (428)
Q Consensus 135 YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~--~nPvi~~~~------------~~~~~~~~~RDP~V~~~~~~g 196 (428)
|||+.+ .....|++|.+.+.. +..|.+.. ..+++.++. .+.....+||||+|+..+++|
T Consensus 88 YTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G 164 (349)
T cd08997 88 YTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETG 164 (349)
T ss_pred EeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCC
Confidence 999853 245778888776532 22232211 124443220 022235789999975443379
Q ss_pred eEEEEEeeecC-C---------------------------ccEEEEE--EeCCCCCcEEcccccccCC-CCCeeecCceE
Q 014220 197 RWRVIIGSKIN-R---------------------------KGLAILY--RSKDFVHWIKAKHPLHSVK-GTGMWECPDFF 245 (428)
Q Consensus 197 ~y~Mv~ga~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~l~~~~-~~~~wECPdlf 245 (428)
+|||+++++.. . .|+|.++ +|+|+.+|++.+ ||.... ....||||++|
T Consensus 165 ~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~-PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 165 KTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLP-PLLEANGVNDELERPHVV 243 (349)
T ss_pred cEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcC-ccccCCCcCCceEcceEE
Confidence 99999998763 2 3666666 667999999986 555432 24579999999
Q ss_pred EeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 246 PVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 246 ~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
+++ | ||+|++|..
T Consensus 244 ~~~--g-------------k~yL~~s~~ 256 (349)
T cd08997 244 FHN--G-------------KYYLFTISH 256 (349)
T ss_pred EEC--C-------------EEEEEEeCC
Confidence 998 5 888888854
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-23 Score=202.63 Aligned_cols=191 Identities=21% Similarity=0.318 Sum_probs=142.2
Q ss_pred ccccCCCCCccCCcceEEE-CCEEEEEEeeCCCCCC---C-CCcEEEEEEeCCCC-CCccCCCCCCCC--CCccCCCeEe
Q 014220 49 YHFQPPKNWINDPNGVMIY-KGIYHLFYQYNPKGAV---W-GNIVWAHSTSKDLI-NWIPHDPAIYPS--QQSDINGCWS 120 (428)
Q Consensus 49 ~H~~p~~gw~nDPng~~~~-~G~YHlFYq~~p~~~~---~-g~~~Wgha~S~Dlv-~W~~~~~al~P~--~~~D~~gv~S 120 (428)
..|+.+..++.+|. +++. +|+||||||..|.+.. | ....|+||+|+|+. +|+..+++|.|+ ..||+.++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46788889999996 6664 5899999999886543 2 24569999999987 899999999887 4688999999
Q ss_pred eeEEEcCCCceEEEEcccCC-------CCcceEEEEEEcCCCCCccceeEecCCCceecCC------------------C
Q 014220 121 GSATILPGEKPAIFYTGIDP-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD------------------A 175 (428)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~------------------~ 175 (428)
++++.. +|+++||||+... ...+.+++|+|.+.. .+|++. .+||+.+. +
T Consensus 83 P~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 999874 7999999999753 235677888887632 367764 34555220 0
Q ss_pred ---------------------------CC--------------CCCCCCccCCeEEEECCCCeEEEEEeeecC----Ccc
Q 014220 176 ---------------------------MN--------------QINTSSFRDPTTAWLGPDKRWRVIIGSKIN----RKG 210 (428)
Q Consensus 176 ---------------------------~~--------------~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~----~~G 210 (428)
.. .....++|||+| |+ .+|+|+|+++++.+ ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 00 012346799995 55 35999999998863 468
Q ss_pred EEEEEEeCCCCCcEEccccccc------C---CCCCeeecCceE-Eec
Q 014220 211 LAILYRSKDFVHWIKAKHPLHS------V---KGTGMWECPDFF-PVS 248 (428)
Q Consensus 211 ~i~ly~S~Dl~~W~~~~~~l~~------~---~~~~~wECPdlf-~l~ 248 (428)
+|.+|+|+|+++|++.+.++.. . ....+||||+++ +.+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 9999999999999998654321 1 136799999999 776
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=176.45 Aligned_cols=192 Identities=17% Similarity=0.244 Sum_probs=138.6
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCC-CCccCCCeEeeeEEEcCCCceEE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPS-QQSDINGCWSGSATILPGEKPAI 133 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~-~~~D~~gv~SGsav~~~dg~~~l 133 (428)
.||++||+ +++++|+||||++....+. ....|.+++|+||+||+.++.+|.+. ..++..++|+++++. .+|+++|
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 46899996 5788999999998765322 24679999999999999999988764 456678999999987 4899999
Q ss_pred EEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEE
Q 014220 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (428)
Q Consensus 134 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ 213 (428)
|||+. +.+++|+|++.. ..|++..++|++.+. . .....+||.| |.+++|++||++++.. +...
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~--~--~~~~~iDp~v-f~d~dG~~yl~~~~~~---~~~i 143 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKF--T--FGAQPIDPDV-FIDDDGQAYLYWGGWG---HCNV 143 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCC--c--CCCCccCCCe-EECCCCCEEEEEcCcC---CEEE
Confidence 99986 457899998764 358874467887543 1 2356899996 4557899999998741 1222
Q ss_pred EEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCeeeEEEE
Q 014220 214 LYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (428)
Q Consensus 214 ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG 283 (428)
+-.|+|+.+|+.....+ ......+.|||.+++.+ | +++|++|........|.++
T Consensus 144 ~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 144 AKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 33578898886543221 11234589999999987 5 7888888754332334444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=176.20 Aligned_cols=160 Identities=18% Similarity=0.199 Sum_probs=118.9
Q ss_pred CCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCC-CCCCC--CCCccCCCeEeeeEEEcCCCceEEEEc
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYP--SQQSDINGCWSGSATILPGEKPAIFYT 136 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~-~al~P--~~~~D~~gv~SGsav~~~dg~~~l~YT 136 (428)
|| ++++++|+||||||.++.. +.++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 68 7899999999999987643 46799999999999999875 34556 5567889999999987 5899999999
Q ss_pred ccCC-CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec---CCccEE
Q 014220 137 GIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI---NRKGLA 212 (428)
Q Consensus 137 g~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~---~~~G~i 212 (428)
+... ...+.+++|.|+|+ .+|+|.. . ++. + ..||+.++-...+|+|+|++.... ++.+.|
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~~-~--------~~~d~~~~p~~~~g~y~m~~r~~~~~~~~~~~I 140 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLG-T-SLV-P--------NNRDGILFPEKINGKYVMLHRPFEYGGTSPPDM 140 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEec-c-cCC-C--------CCCCEEEeeEEECCEEEEEEccccCCCCCCCcE
Confidence 9763 35677899999874 7999973 2 221 1 137887432224799999996442 246789
Q ss_pred EEEEeCCCCCcEEcccccccCCCCCeeecC
Q 014220 213 ILYRSKDFVHWIKAKHPLHSVKGTGMWECP 242 (428)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~l~~~~~~~~wECP 242 (428)
.+++|+||.+|+..+ ++... ....||+-
T Consensus 141 ~lA~S~Dl~~W~~~~-~~~~~-~~~~wd~~ 168 (268)
T cd08993 141 WLSFSPDLVHWGNHR-FVLSP-RPNHWEQL 168 (268)
T ss_pred EEEECCCcCccCCCe-EEecC-CCCceeec
Confidence 999999999998765 34332 22346544
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.7e-19 Score=173.34 Aligned_cols=162 Identities=21% Similarity=0.293 Sum_probs=122.8
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCC--CCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGA--VWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~--~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (428)
+.+|. +++.+|+|||||+++|..+ .++.++|+||+|+||++|++.++++. +..++.+++++.+.+|+++|||
T Consensus 79 ~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~-----~~~~~iD~~vf~~~dg~~yl~y 152 (294)
T cd08984 79 FWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDL-----DSDRVIDACVFKLPDGRWRMWY 152 (294)
T ss_pred eeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCcccc-----CCCCcEEeEEEEeCCCEEEEEE
Confidence 56785 7889999999999998653 34578999999999999999887632 2357889999886679999999
Q ss_pred cccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEE
Q 014220 136 TGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215 (428)
Q Consensus 136 Tg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly 215 (428)
|+.. ....+++|.|.|+ .+|++. .+++... ..++|+|+ + .+|+|||+++. ..| +.+|
T Consensus 153 ~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~~--------~~EgP~v~-k-~~g~yym~~~~---~~g-~~~~ 209 (294)
T cd08984 153 KDER--RGSTTYAADSEDL-----YHWTVE--GPVLGDR--------PHEGPNVF-R-WKGYYWMIIDE---WKG-LGVY 209 (294)
T ss_pred ECCC--CCeEEEEEECCCC-----CEEEeC--CccccCC--------CCCCCCee-E-ECCEEEEEEcC---Cce-EEEE
Confidence 9853 3345678888774 789984 3555321 23799965 4 47899999854 234 6799
Q ss_pred EeCCCCCcEEcccccccC----CCCCeeecCceEEec
Q 014220 216 RSKDFVHWIKAKHPLHSV----KGTGMWECPDFFPVS 248 (428)
Q Consensus 216 ~S~Dl~~W~~~~~~l~~~----~~~~~wECPdlf~l~ 248 (428)
+|+|+.+|++.+.++... ....+.+||++++.+
T Consensus 210 ~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 210 RSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred ECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 999999999988766532 123467999999876
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-18 Score=165.75 Aligned_cols=196 Identities=19% Similarity=0.173 Sum_probs=135.8
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCC-ccCCCeEeeeEEEcCCCceEEE
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-SDINGCWSGSATILPGEKPAIF 134 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-~D~~gv~SGsav~~~dg~~~l~ 134 (428)
+.+-||. +++++|+|+||+..... ..|.+++|+||+||+..+.+|.+... ++..++|.++++. .+|+++|+
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~ 77 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLY 77 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEE
Confidence 4567995 77889999999986532 57999999999999999988877655 4557888888876 48999999
Q ss_pred EcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCcc---
Q 014220 135 YTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG--- 210 (428)
Q Consensus 135 YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G--- 210 (428)
|++.... ..+.+++|+|+|.. ..|++... +++..+ . .....+||.|+ .+++|++||++++.....+
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~-~~~~~~--~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~ 147 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHGK-PPLCCP--E--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPT 147 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCCc-ceEecC--C--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCc
Confidence 9998642 45667788887753 36887643 333322 1 23567999964 5568999999987543211
Q ss_pred EEEEE-EeCCCCCcEEcccccccC---CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCee--eEEEEE
Q 014220 211 LAILY-RSKDFVHWIKAKHPLHSV---KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHE--YYTVGT 284 (428)
Q Consensus 211 ~i~ly-~S~Dl~~W~~~~~~l~~~---~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~--~Y~vG~ 284 (428)
.+.+. .|+|+.+|......+... ....++|||.+|+.+ | +++|++|....... .|.+|-
T Consensus 148 ~i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~~~~~~~~y~i~~ 212 (287)
T cd08999 148 PIYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGGCCSGASTYAVGV 212 (287)
T ss_pred eEEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCCccCCCCCEEEEE
Confidence 23333 378988886433223211 134589999999997 5 88888887532221 455553
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.8e-17 Score=157.28 Aligned_cols=195 Identities=15% Similarity=0.211 Sum_probs=139.2
Q ss_pred CCcceEEECCEEEEEEeeCCCCCC---CCCcEEEEEEeCCCCCCccCCCCCCCCC--CccCCCeEeeeEEEcCCCceEEE
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAV---WGNIVWAHSTSKDLINWIPHDPAIYPSQ--QSDINGCWSGSATILPGEKPAIF 134 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~---~g~~~Wgha~S~Dlv~W~~~~~al~P~~--~~D~~gv~SGsav~~~dg~~~l~ 134 (428)
|| .++.++|+|+||.......+. .....|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++||
T Consensus 2 DP-~~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DP-AAHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CC-CcEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 89 477889999999987654432 2345699999999999999999887543 36778999999986 58999999
Q ss_pred EcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEE
Q 014220 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAIL 214 (428)
Q Consensus 135 YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~l 214 (428)
|++......+.+++|+|++.. ..|++....|++... + ......||.| |.+++|++||++++. .+....
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~--~--~~~~~iDp~v-f~d~dG~~yl~~~~~---~~~~~~ 147 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTP--S--GGWYSIDPAV-FIDDDGQAYLYWGGG---LGLRVA 147 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccC--C--CCCCccCCcE-EECCCCCEEEEECCc---CCEEEE
Confidence 998754345667899997753 468876544555322 1 2346789996 455789999999875 233334
Q ss_pred EEeCCCCCcEEccccccc-----CCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCeeeEEEE
Q 014220 215 YRSKDFVHWIKAKHPLHS-----VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (428)
Q Consensus 215 y~S~Dl~~W~~~~~~l~~-----~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG 283 (428)
-.|+|+.+|+.....+.. .......|+|.+++.+ | +++|++|........|.+.
T Consensus 148 ~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 148 KLKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred EeCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 467899999754333321 1234578999999997 5 8888888765444555554
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-15 Score=146.59 Aligned_cols=192 Identities=21% Similarity=0.237 Sum_probs=130.6
Q ss_pred CCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCC----CCCCccCCCeEeeeEEEcCCCceEEEE
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSATILPGEKPAIFY 135 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~----P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (428)
||. ++.++|+|+||+..... ....+..++|+||++|+..+.+|. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 895 78899999999987643 234689999999999999998875 34445568899999987 479999999
Q ss_pred cccCC-CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC--CccEE
Q 014220 136 TGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGLA 212 (428)
Q Consensus 136 Tg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~--~~G~i 212 (428)
++... ...+.+++|+|+|. ..|.+... .... . ......+||.|+ .+++|++||++++... +.+.|
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~--~-~~~~~~iDp~vf-~d~dg~~yl~~~~~~~~~~~~~i 143 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPP--T-SNNGNSIDPTVF-KDDDGKYYLYYGSGDPGAGFGGI 143 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccc---cCcC--c-cCCCCccCcceE-EcCCCCEEEEEecccCCCCCCcE
Confidence 99753 23567888988775 34544321 1111 1 123467899965 5567999999987642 24568
Q ss_pred EEEEeCCCCCcEEccccc--ccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCeeeEEEEE
Q 014220 213 ILYRSKDFVHWIKAKHPL--HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284 (428)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~l--~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG~ 284 (428)
.++++++...|......+ .......+.|+|.+|+.+ | +|+|++|........|.++-
T Consensus 144 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~~ 202 (271)
T cd08978 144 YISELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIGY 202 (271)
T ss_pred EEEEECcccccccCCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEEE
Confidence 888887654443211111 112234589999999987 5 88888887543223455543
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.3e-15 Score=145.59 Aligned_cols=180 Identities=18% Similarity=0.189 Sum_probs=126.1
Q ss_pred CCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC-CccCCCeEeeeEEEcCCCceEEEEccc
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPAIFYTGI 138 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~ 138 (428)
||. +++++|+|+||+..... ...+..++|+||++|+.++.++.+.. .++..++|.++++. .+|+++|+||+.
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 895 78899999999876543 23588999999999999998887654 37778999999887 489999999997
Q ss_pred CCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCC---ccEEEE
Q 014220 139 DPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR---KGLAIL 214 (428)
Q Consensus 139 ~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~---~G~i~l 214 (428)
... ..+.+++|+|+|.. ..|++... +.+.. ....+||.|+ .+++|+|||+++..... .+....
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~-~~~~~-------~~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~ 141 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKK-PPIDF-------EPKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGT 141 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCC-CcccC-------CCcccCCceE-ECCCCCEEEEEEecCCCCcccceEEE
Confidence 543 45778899998753 35776432 22221 1245799965 55679999999865422 234444
Q ss_pred EEeCCCCCcEEccc----ccccC--------------CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 215 YRSKDFVHWIKAKH----PLHSV--------------KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 215 y~S~Dl~~W~~~~~----~l~~~--------------~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
--|.|+.+|..... ++..+ ....+.|+|.+++.+ | +|+|++|...
T Consensus 142 ~l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 142 ELVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred EEccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 56788877752111 11110 123479999999997 5 7888888643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.6e-15 Score=147.80 Aligned_cols=179 Identities=18% Similarity=0.275 Sum_probs=127.5
Q ss_pred CccccccCCCCC-ccCCcceEEECCEEEEEEeeCCC-----------CC--CCCCcEEEEEEeCCCCCCccCCCCCCCC-
Q 014220 46 RTGYHFQPPKNW-INDPNGVMIYKGIYHLFYQYNPK-----------GA--VWGNIVWAHSTSKDLINWIPHDPAIYPS- 110 (428)
Q Consensus 46 Rp~~H~~p~~gw-~nDPng~~~~~G~YHlFYq~~p~-----------~~--~~g~~~Wgha~S~Dlv~W~~~~~al~P~- 110 (428)
.|..=+.+..+. ..||..+++.+|+|||||+.... .+ .|....++||+|+||++|++.+++|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 444444444443 46998799999999999986532 11 2456788999999999999999888754
Q ss_pred -CCccCCCeEeeeEEEcCCCceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceecCCCC---------
Q 014220 111 -QQSDINGCWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM--------- 176 (428)
Q Consensus 111 -~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~--------- 176 (428)
..||+.++|.++|+. .+|+++|||++.... ..+.+++|+|.++. ..|++. .+||+.+...
T Consensus 104 ~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 358999999999986 599999999976421 23567999998763 359886 6799865310
Q ss_pred -------CCCCCCCccCCeEEEECCCCeEEEEEeeecC--------CccEEEEEEeCCCC-CcEEcc-ccccc
Q 014220 177 -------NQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--------RKGLAILYRSKDFV-HWIKAK-HPLHS 232 (428)
Q Consensus 177 -------~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~--------~~G~i~ly~S~Dl~-~W~~~~-~~l~~ 232 (428)
..++...+.||.|+.. +|+|||++.+... ..-+|.++.|++.. -|+... +|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~~~--~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~~~nPi~~ 248 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLFPF--NGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKSPYNPITN 248 (349)
T ss_pred eeEeccCCCcccCceECCEEEEE--CCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeCCCCcccC
Confidence 1144556789997644 7899999966431 12368899999876 477543 35543
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.2e-14 Score=138.37 Aligned_cols=179 Identities=21% Similarity=0.224 Sum_probs=121.7
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCC-------ccCCCeEeeeEEEcCCCc
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEK 130 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~D~~gv~SGsav~~~dg~ 130 (428)
+.||. +++++|+|+||+... ++++++|+||+||+..+.++.+... .+..++|.++++. .+|+
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 46995 789999999999854 5899999999999999988765432 3457899999886 4999
Q ss_pred eEEEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCc
Q 014220 131 PAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (428)
Q Consensus 131 ~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~ 209 (428)
++|||++.... ....+++|+|++.. ...|++. +||+... ++......+||.|+ .+++|++||++++...
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~--~~~~~~~~iDp~vf-~d~dG~~Yl~~~~~~~-- 139 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESG--PGRDDPNAIDPNVF-YDEDGKLWLSFGSFWG-- 139 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecC--CCCCCcccccCCEE-EcCCCCEEEEeeeccC--
Confidence 99999987543 45667889988750 1479874 4887543 22123467899965 5468999999986431
Q ss_pred cEEEEEE-eCC---CCCcEEcccccccCC-CCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 210 GLAILYR-SKD---FVHWIKAKHPLHSVK-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 210 G~i~ly~-S~D---l~~W~~~~~~l~~~~-~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
| +.+.+ +.| ...|......+.... .....|-|.+|+.+ | +++|++|..
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~ 192 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYG 192 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcc
Confidence 2 33332 222 223321111122111 23468999999987 5 788888754
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.7e-14 Score=138.68 Aligned_cols=169 Identities=18% Similarity=0.241 Sum_probs=118.6
Q ss_pred ccCCcceEEE--CCEEEEEEee-CCCC----CCCC-CcEEEEEEeCC-CCCCccCCCCCCCCCCccCCCeEeeeEEEcCC
Q 014220 58 INDPNGVMIY--KGIYHLFYQY-NPKG----AVWG-NIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPG 128 (428)
Q Consensus 58 ~nDPng~~~~--~G~YHlFYq~-~p~~----~~~g-~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~d 128 (428)
.-||. +++. +|+|||||.. .... ..|. ...+++|+|+| |++|++++.++.+...+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 78995 7776 7899999952 1111 1233 35799999999 99999998776654455667799999987 48
Q ss_pred CceEEEEcccCC-----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEe
Q 014220 129 EKPAIFYTGIDP-----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (428)
Q Consensus 129 g~~~l~YTg~~~-----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~g 203 (428)
|+++|||++... .....+++|+|+| +.+|++.+ ++.... ....||.|+ ...+|+|+|++.
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~~-------~~~iD~~vf-~~~dg~~yl~y~ 153 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLDS-------DRVIDACVF-KLPDGRWRMWYK 153 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccCC-------CCcEEeEEE-EeCCCEEEEEEE
Confidence 999999997532 1345677888877 36898753 332111 235799965 546799999996
Q ss_pred eecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEec
Q 014220 204 SKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 204 a~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (428)
.... ...+.+..|+|+.+|+..+. +.. ....|.|.+|+.+
T Consensus 154 ~~~~-~~~~~~a~s~D~~~w~~~~~-~i~---~~~~EgP~v~k~~ 193 (294)
T cd08984 154 DERR-GSTTYAADSEDLYHWTVEGP-VLG---DRPHEGPNVFRWK 193 (294)
T ss_pred CCCC-CeEEEEEECCCCCEEEeCCc-ccc---CCCCCCCCeeEEC
Confidence 4322 23467889999999997543 322 1235999999986
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-12 Score=127.81 Aligned_cols=198 Identities=16% Similarity=0.096 Sum_probs=132.6
Q ss_pred cCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC----CccCCCeEeeeEEEcC-CCceEE
Q 014220 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ----QSDINGCWSGSATILP-GEKPAI 133 (428)
Q Consensus 59 nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~----~~D~~gv~SGsav~~~-dg~~~l 133 (428)
-|| ++++++|+|++|-.....+.. ....|...+|+||+||+.++.+|.+.. .+...++|.++++..+ +|+++|
T Consensus 4 h~~-~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m 81 (265)
T cd08985 4 HGG-GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVM 81 (265)
T ss_pred ccC-ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEE
Confidence 356 688899999999877643211 135688999999999999999997764 3445689999998643 589999
Q ss_pred EEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEE
Q 014220 134 FYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLA 212 (428)
Q Consensus 134 ~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i 212 (428)
+|++...+ ....+++|+|++.. ..|+... .+. + . ....|||.|+ .+++|++||++++..+. .+
T Consensus 82 ~~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~--~---~~~~~Dp~vf-~DdDG~~Yl~~~~~~~~--~i 145 (265)
T cd08985 82 WMHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---P--L---GYQSRDFGLF-VDDDGTAYLLYSDRDNS--DL 145 (265)
T ss_pred EEEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---C--C---CCCccCCceE-EcCCCCEEEEEecCCCC--ce
Confidence 99986532 45578899987653 3466532 121 1 1 2356999965 55789999999876422 34
Q ss_pred EEEE-eCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC---CCeeeEEEEEeeCC
Q 014220 213 ILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD---TKHEYYTVGTYSTA 288 (428)
Q Consensus 213 ~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~---~~~~~Y~vG~~d~~ 288 (428)
.+.+ ++|+.++... +.. .......|||.+|+.+ | +++|++|... .....|++.+ + -
T Consensus 146 ~i~~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~-s-~ 205 (265)
T cd08985 146 YIYRLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT-S-I 205 (265)
T ss_pred EEEEeCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec-C-C
Confidence 4554 3677777532 221 1234579999999998 5 8888888642 2345676665 2 2
Q ss_pred CCcccC
Q 014220 289 KDRYVP 294 (428)
Q Consensus 289 ~~~f~p 294 (428)
.|.|+.
T Consensus 206 ~GP~~~ 211 (265)
T cd08985 206 LGPWTD 211 (265)
T ss_pred CCCccc
Confidence 345543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.2e-12 Score=123.68 Aligned_cols=178 Identities=18% Similarity=0.165 Sum_probs=117.6
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCC--c----cCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ--S----DINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~--~----D~~gv~SGsav~~~dg 129 (428)
+..-||. +++.+|+|+||...... ...+..++|+||+||+.++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4677996 78899999998532211 235889999999999999988754321 1 346799999987 499
Q ss_pred ceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC--
Q 014220 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-- 207 (428)
Q Consensus 130 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~-- 207 (428)
+++|+|++........+.+|+|++.. ..|+. |++.. ...+||.|+ .+++|++||+++....
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~--------~~~iDp~vf-~d~dG~~Y~~~~~~~~~~ 141 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD--------SGGIDPSLF-FDDDGKVYLVGNGWDERR 141 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC--------CCccCCcee-EcCCCCEEEEecccCCcc
Confidence 99999998753333456788887653 24542 33211 145799965 4578999999886432
Q ss_pred ---CccEEEEEEeCCCCCcEEcccc--cccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 208 ---RKGLAILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 208 ---~~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
+.+.|.+.+. |...|+..+++ +.........|+|.+|+.+ | +++|++|..
T Consensus 142 ~~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 142 GYNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred ccCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 1234555543 33345443332 2222233578999999987 5 788888754
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-11 Score=122.33 Aligned_cols=187 Identities=13% Similarity=0.235 Sum_probs=123.8
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCC---------CCCCcEEEEEEeCCCCCCccCCCCCCCC--CCccCCCeEeeeEE
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGA---------VWGNIVWAHSTSKDLINWIPHDPAIYPS--QQSDINGCWSGSAT 124 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~---------~~g~~~Wgha~S~Dlv~W~~~~~al~P~--~~~D~~gv~SGsav 124 (428)
.+.-||. ++.++|+|+||........ .+....+-..+|+||++|+.++.++.|. ..|. .++|.+.++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceE
Confidence 4668996 6789999999997653221 1223468889999999999999988742 3443 478999988
Q ss_pred EcCC----CceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCC-CCccCCeEEEECCCCeEE
Q 014220 125 ILPG----EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINT-SSFRDPTTAWLGPDKRWR 199 (428)
Q Consensus 125 ~~~d----g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~-~~~RDP~V~~~~~~g~y~ 199 (428)
.. + |+++|+|+.. ...+++|+|++.. -.|+...++|++.... ++... ....||.++ .+++|+.|
T Consensus 85 ~~-~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~-~~~~~~~~~iDp~~f-~DdDG~~Y 153 (311)
T cd09003 85 VK-KINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGST-PGCAGVVWLFDPAVF-VDDDGQGY 153 (311)
T ss_pred Ee-ccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCC-CCccCCccccCCCeE-ECCCCCEE
Confidence 64 6 9999999853 2347899987764 4688754567764320 11111 123699964 55789999
Q ss_pred EEEeeecC-----CccEEEEEE-eCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 200 VIIGSKIN-----RKGLAILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 200 Mv~ga~~~-----~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
|++++... ..+.+.+.+ ++|+..-. +++..- .....+|.|.+++.+ | +++|++|..
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~i-~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVTI-DAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceecc--CCceEc-cCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 99985431 123455554 45665432 222111 113579999999987 5 788888764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.8e-11 Score=116.92 Aligned_cols=185 Identities=14% Similarity=0.083 Sum_probs=122.3
Q ss_pred CCCccCCcceEEE--CCEEEEEEeeCCCCCCC-CCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcC-CCc
Q 014220 55 KNWINDPNGVMIY--KGIYHLFYQYNPKGAVW-GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILP-GEK 130 (428)
Q Consensus 55 ~gw~nDPng~~~~--~G~YHlFYq~~p~~~~~-g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~-dg~ 130 (428)
.+-+.||. +++. +|+|||++...-....+ +...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35578996 6666 89999999865322111 346799999999999999887642211 24678999988754 689
Q ss_pred eEEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC
Q 014220 131 PAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (428)
Q Consensus 131 ~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~ 207 (428)
++|+|++.... ....+.+.++.. . ++.+|+. ..+++.+. ....|+.++ .+ +|+|||++....+
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt-~--Df~tft~--p~~~~~~~-------~~~ID~~v~-~~-~g~~Yl~~k~~~~ 157 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTT-S--DFVTFTE--PKVWIDLG-------ANVIDTTVV-KV-GGTYYRFYKNEGS 157 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEec-C--cccccCC--CeEeecCC-------CCeEeeEEE-Ee-CCEEEEEEecCCC
Confidence 99999987532 122233333321 1 1468875 24666422 356899864 43 4899999975432
Q ss_pred CccEEEEEEeCCCC-CcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 208 RKGLAILYRSKDFV-HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 208 ~~G~i~ly~S~Dl~-~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
..|.+.+|++|. .|+...... .......|-|.+|+.+.. .+|+|+++..
T Consensus 158 --~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~y 207 (276)
T cd08983 158 --KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDNY 207 (276)
T ss_pred --CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEEC
Confidence 457888999987 677654321 122357999999999832 3888887653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.6e-12 Score=126.85 Aligned_cols=196 Identities=18% Similarity=0.275 Sum_probs=125.5
Q ss_pred ceEEECCE--EEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCC-CCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccC
Q 014220 63 GVMIYKGI--YHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYPSQQSDINGCWSGSATILPGEKPAIFYTGID 139 (428)
Q Consensus 63 g~~~~~G~--YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~-~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 139 (428)
|++.++|. +||.|...-.. ....+.|.|.|+|.+||+..+ ++|.|+..++..||....++.. +|+++|+||+.+
T Consensus 36 gai~~~~~~R~~l~yr~~~~~--~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yymtYta~~ 112 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGSD--IGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYYMTYTAYS 112 (312)
T ss_dssp EEEEETTE--EEEEEEEEESS--SSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECCC--CceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEEEEEEEec
Confidence 67767666 89998765322 223489999999999999874 7899999999999999999875 889999999987
Q ss_pred CCCcceEEEEEEcCCCCCccceeEecCCCceecCCCC-CCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeC
Q 014220 140 PHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM-NQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSK 218 (428)
Q Consensus 140 ~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~-~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~ 218 (428)
. ....+++|+|+| +.+|+|.. +++..... .......-+|-.+|-...+|+|+|+.. .+.|.+.+|+
T Consensus 113 ~-~~~~~~la~s~D-----~~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S~ 179 (312)
T PF04041_consen 113 G-KGPRIGLATSKD-----FKHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYSP 179 (312)
T ss_dssp S-SSEEEEEEEESS-----SSSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEES
T ss_pred C-CCcccceEEccc-----hHhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEecC
Confidence 4 346678999988 48999974 33322100 001112235654322224799999998 3468999999
Q ss_pred CCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEee-CCCCeeeEEEEE
Q 014220 219 DFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL-DDTKHEYYTVGT 284 (428)
Q Consensus 219 Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~-~~~~~~~Y~vG~ 284 (428)
|+++|+....++... ....||+ .+++. |+.-+. + +.-|++++.. .......|.+|-
T Consensus 180 Dl~~W~~~~~~~~~~-~~~~~d~---~kiG~-g~pPi~----t-~~GwL~iyHG~~~~~~~~Y~~g~ 236 (312)
T PF04041_consen 180 DLIHWGNHREPLLSP-RPGWWDS---SKIGA-GPPPIK----T-DEGWLLIYHGNVTDEGRVYRLGA 236 (312)
T ss_dssp SSSSEEEEBETSB---STTSSCS---SEEEE--S-EEE----E-TTEEEEEEEEEESSTTTEEEEEE
T ss_pred CcccccccccccccC-CCCcChh---hcccC-CCCceE----e-cCCEEEEEeccccCCCCEEEEEE
Confidence 999998765544433 2346776 34442 211111 1 1248877663 123345677877
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-11 Score=118.54 Aligned_cols=183 Identities=20% Similarity=0.246 Sum_probs=126.0
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCcc--CCCe-EeeeEEEcCCCceE
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD--INGC-WSGSATILPGEKPA 132 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D--~~gv-~SGsav~~~dg~~~ 132 (428)
+..-||. ++..+|+|+||+...... ..+..++|+||+||+..+.+|.+....+ ..+. |.+.++. .+|+++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yy 80 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKYY 80 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeEE
Confidence 5678995 788999999999876543 3588999999999999987776654332 2333 9999876 599999
Q ss_pred EEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCC--cc
Q 014220 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR--KG 210 (428)
Q Consensus 133 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~--~G 210 (428)
|||+.........+.+|+|++.. ..|+... .+.+. .....||.|+ .+++|++||+++..... .+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~--------~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~ 146 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP--------GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGG 146 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE--------SSSSSSEEEE-EETTSEEEEEEEESTTTSSEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec--------cccccCceEE-EecCCCcEEeCcccCCCccce
Confidence 99993222345668899988763 4687642 12221 1345799965 44679999999986532 34
Q ss_pred EEEEEE-eCCCCCcEEcc-cccccC---CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 211 LAILYR-SKDFVHWIKAK-HPLHSV---KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 211 ~i~ly~-S~Dl~~W~~~~-~~l~~~---~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
.|.+.+ ++|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 147 ~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 147 GIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred eEEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 555555 46666666443 122222 245689999999997 5 7888888643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-10 Score=114.30 Aligned_cols=135 Identities=19% Similarity=0.228 Sum_probs=93.5
Q ss_pred CCccCCcceEEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC-CccCCCeEeeeEEEcCCCceE
Q 014220 56 NWINDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 56 gw~nDPng~~~~--~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~-~~D~~gv~SGsav~~~dg~~~ 132 (428)
.++-||. ++++ +|+||||..............+.+.+|+||+||+..+.++.+.. .+...++|.+.++. .+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCEEE
Confidence 4578996 6777 99999999765332111124589999999999999998886543 34456899999875 599999
Q ss_pred EEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEee
Q 014220 133 IFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 133 l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
|||+..... ....+.+|+|++.. -.|+.....|+.... ....||.+ |.+++|++||+++.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~~-------~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPED-------WMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCCC-------CceEcCce-EEcCCCCEEEEEEe
Confidence 999876432 22346788887653 357764333443211 23579985 55578999999874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.8e-10 Score=113.03 Aligned_cols=180 Identities=19% Similarity=0.215 Sum_probs=115.1
Q ss_pred cCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCc-------cCCCeEeeeEEEcCCCce
Q 014220 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS-------DINGCWSGSATILPGEKP 131 (428)
Q Consensus 59 nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~-------D~~gv~SGsav~~~dg~~ 131 (428)
.||. ++.++|+|+||.... .+..++|+||+||+..+.+|.+...+ ...++|.+.++. .+|++
T Consensus 1 ~DP~-vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~y 69 (279)
T cd08988 1 HDPV-IIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKF 69 (279)
T ss_pred CCCE-EEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEE
Confidence 3895 778899999987531 37789999999999999888644332 236899999876 58999
Q ss_pred EEEEcccCCC-CcceEEEEEEcCCCCCcc-ceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCc
Q 014220 132 AIFYTGIDPH-NRQVQNLAVPKNLSDPYL-REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (428)
Q Consensus 132 ~l~YTg~~~~-~~~~q~lA~S~D~~d~~l-~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~ 209 (428)
+|||++.... ....+++|+|++...+.- ..|++ ..+++... .. ......||.++ .+++|++||++++.. .
T Consensus 70 ylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~--~~-~~~~~iDp~~f-~DdDG~~Yl~~g~~~--~ 141 (279)
T cd08988 70 YLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSD--AS-DNYNAIDPAII-FDQHGQPWLSFGSFW--G 141 (279)
T ss_pred EEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecC--CC-CCCCccCCceE-EcCCCCEEEEecccC--C
Confidence 9999986432 346778999987654311 11442 24665432 11 12345799965 457899999998642 1
Q ss_pred cEEEEEE-eCCCCCcEEccc--ccccC-CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 210 GLAILYR-SKDFVHWIKAKH--PLHSV-KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 210 G~i~ly~-S~Dl~~W~~~~~--~l~~~-~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
| |.+.+ +.|+..-...+. .+... ......|-|-+++.+ | +++|++|..
T Consensus 142 g-i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 142 G-IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred C-EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 2 33333 344333211111 12111 123578999999987 5 777877753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.7e-11 Score=114.09 Aligned_cols=137 Identities=21% Similarity=0.303 Sum_probs=97.5
Q ss_pred CCccCCcceEEEC-CEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCC-------CCCCccCCCeEeeeEEEcC
Q 014220 56 NWINDPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY-------PSQQSDINGCWSGSATILP 127 (428)
Q Consensus 56 gw~nDPng~~~~~-G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~-------P~~~~D~~gv~SGsav~~~ 127 (428)
+.+.||. +++.+ |+|||||...... ......+++|+|+|+++|+..+..+. +...++...+..+.++..+
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~ 141 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDE 141 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEEC
Confidence 4577886 66777 9999999976532 23357899999999999998875542 2233445677889988764
Q ss_pred C-CceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeee
Q 014220 128 G-EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (428)
Q Consensus 128 d-g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~ 205 (428)
+ |+++|+|++........+.+|.|.|. .+|++....+... .+.....+++|.++ + .+|+|+|++++.
T Consensus 142 ~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~~----~~~~~~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 142 EGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPPGPR----TGYDDGQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCCCCC----CcccCCcCccceEE-E-ECCEEEEEEEec
Confidence 3 89999999875445567888988874 7999864322121 22234678899965 4 368999999876
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.4e-10 Score=113.56 Aligned_cols=171 Identities=18% Similarity=0.221 Sum_probs=114.5
Q ss_pred ccCCcceEEECCEEEEEEeeCCCC-CCCCCcEEEEEEeCCCC-CCccCC-CCCCCCC------------------CccCC
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKG-AVWGNIVWAHSTSKDLI-NWIPHD-PAIYPSQ------------------QSDIN 116 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~-~~~g~~~Wgha~S~Dlv-~W~~~~-~al~P~~------------------~~D~~ 116 (428)
+..|+ +++++|+|||||+..-.. ..-...+.|.|+|++.. .|++.+ ++|.|.. .||..
T Consensus 112 vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~ 190 (349)
T cd08992 112 VFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSH 190 (349)
T ss_pred eECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccC
Confidence 45674 778999999999854211 11123568888888876 698764 5566642 36777
Q ss_pred CeEeeeEEEcCCCceEEEEcccCC-------CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeE
Q 014220 117 GCWSGSATILPGEKPAIFYTGIDP-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTT 189 (428)
Q Consensus 117 gv~SGsav~~~dg~~~l~YTg~~~-------~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V 189 (428)
++...+++. .+|+++|||+|+.. ...+.+++|+|++.. -.|+|.+.|||+... + ..+
T Consensus 191 ~v~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~~~nPi~~~~--------~--~~~- 254 (349)
T cd08992 191 KVHDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKSPYNPITNSG--------H--ETC- 254 (349)
T ss_pred ceECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeCCCCcccCCC--------C--ceE-
Confidence 787778765 59999999999752 134678999998875 458998889998533 1 236
Q ss_pred EEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEec
Q 014220 190 AWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 190 ~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (428)
||.. .+.+-.++.....+.+. +..|+|.++|+-...+-..+...+..+|||-++-+
T Consensus 255 ~~~~-~~~~~~~~~~d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 255 VWQY-KGGIAAMLTTDGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred EEec-CCceEEEEeccCCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 5884 45673444444334453 77899999999765322233345567788766654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.21 E-value=7.6e-10 Score=108.03 Aligned_cols=179 Identities=17% Similarity=0.094 Sum_probs=111.3
Q ss_pred CccCCcceEEE-CCEEEEEEeeCCCCC----C-CCCcEEEEEEeCCCCCCccCCCCCCCCCC------------ccCCCe
Q 014220 57 WINDPNGVMIY-KGIYHLFYQYNPKGA----V-WGNIVWAHSTSKDLINWIPHDPAIYPSQQ------------SDINGC 118 (428)
Q Consensus 57 w~nDPng~~~~-~G~YHlFYq~~p~~~----~-~g~~~Wgha~S~Dlv~W~~~~~al~P~~~------------~D~~gv 118 (428)
||-||. ++.. +|+|+|+......+. . ........++|+||+||+..+.++..... +...++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688996 5555 689999987543221 0 11235778999999999999887754321 234689
Q ss_pred EeeeEEEcCCCceEEEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCe
Q 014220 119 WSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (428)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~ 197 (428)
|.+.+.. .+|+++|+|+..... ....+.+|++++.. -.|+..... .+ ...-.||.+ |.+++|+
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~----~~------~~~~iD~~~-f~D~DG~ 143 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGN----KP------LFPGIDPSL-FEDDDGK 143 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCC----CC------CCCccCCce-EEcCCCC
Confidence 9999876 589999999976432 23456677766543 346653221 01 012469985 5567899
Q ss_pred EEEEEeeecCCccEEEEEEeCCCCCcEEcccccccC----CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 198 WRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV----KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 198 y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~----~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
+||+++... + .--+.|+....-....+... ......|-|.+++.+ | +++|++|..
T Consensus 144 ~Yl~~~~~~-----i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 144 VYLVWHNTL-----I-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEEEeeCCc-----e-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 999997531 1 12255655432111111111 112357999999976 4 888888864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.5e-09 Score=105.89 Aligned_cols=174 Identities=17% Similarity=0.159 Sum_probs=111.8
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCc------cCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS------DINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~------D~~gv~SGsav~~~dg 129 (428)
+..-||. +++++|+|+||+..... ...+...+|+||+||+..+.++...... ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G 78 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YDG 78 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-ECC
Confidence 5667995 78899999999854321 1236678999999999988877543211 235799999876 599
Q ss_pred ceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCc
Q 014220 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (428)
Q Consensus 130 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~ 209 (428)
+++|+|++........+++|++++..+ .|+. |+... ..-.||.++ .+++|+.||+.+..
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~--------~~~IDp~~f-~D~dG~~Yl~~~~~---- 137 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN--------YGGFDPSLF-HDDDGKKYLINMGW---- 137 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCCC----CCcC----CEECC--------CCcccCceE-EcCCCCEEEEecCC----
Confidence 999999986433345678898876532 3543 33321 134799964 55789999998753
Q ss_pred cEEEEEE-eCCCCCcEEcccc----cccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 210 GLAILYR-SKDFVHWIKAKHP----LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 210 G~i~ly~-S~Dl~~W~~~~~~----l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
+.|.+.+ +.|...= .+.+ +.........|-|.+++.+ | +++|++|...
T Consensus 138 ~~i~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 138 SGIRLQEYSPAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred CcEEEEEEChhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 2234433 2332110 1111 1111123478999999986 5 7788888643
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.3e-09 Score=102.08 Aligned_cols=169 Identities=15% Similarity=0.090 Sum_probs=110.6
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCC-----------ccCCCeEeeeEE
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-----------SDINGCWSGSAT 124 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-----------~D~~gv~SGsav 124 (428)
+..-||. +++++|+|+||....-. ...+..++|+||+||+..+.++.+... .-..++|.+.++
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 5567995 77899999999864211 124678899999999999877643211 113579999987
Q ss_pred EcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEee
Q 014220 125 ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 125 ~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
. .+|+++|+|+... ..+.+|+|++.. -.|+.. +++ ....||.|+ .+++|+.||+++.
T Consensus 83 ~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~-----------~~~iDp~~f-~D~dG~~Yl~~~~ 139 (269)
T cd09001 83 Y-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD-----------GGYHDPSLL-FDDDGTAYLVYGG 139 (269)
T ss_pred E-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC-----------CCcccCceE-EcCCCCEEEEeCC
Confidence 6 4999999999852 346788876643 245432 111 134799965 5578999999975
Q ss_pred ecCCccEEEEEE-eCCCCCcEEcccccccCC--CCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 205 KINRKGLAILYR-SKDFVHWIKAKHPLHSVK--GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 205 ~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~--~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
. .+.+.+ +.|+....-....+.... .....|-|.+++-+ | +++|++|..
T Consensus 140 ~-----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~ 191 (269)
T cd09001 140 G-----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAW 191 (269)
T ss_pred C-----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecC
Confidence 3 244443 567666521111222221 13578999999876 5 788888875
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-09 Score=106.47 Aligned_cols=99 Identities=13% Similarity=0.177 Sum_probs=75.4
Q ss_pred eeEEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEE
Q 014220 121 GSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRV 200 (428)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~M 200 (428)
..++. .+|+++|||++...+....+++|+|.|+ .+|++.+ +|++.++....++...++||.|+. .+|+|+|
T Consensus 3 P~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~~--~~g~y~m 73 (268)
T cd08993 3 PAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIVK--IDDTYYI 73 (268)
T ss_pred CeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEEE--ECCEEEE
Confidence 45655 5999999999876556778999999985 7999975 455533211334567889999764 4789999
Q ss_pred EEeeec--CCccEEEEEEeCCCCCcEEccc
Q 014220 201 IIGSKI--NRKGLAILYRSKDFVHWIKAKH 228 (428)
Q Consensus 201 v~ga~~--~~~G~i~ly~S~Dl~~W~~~~~ 228 (428)
++++.. ....+|.+++|+|+.+|++.+.
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~ 103 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGT 103 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEecc
Confidence 998875 3456899999999999998764
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.8e-09 Score=103.16 Aligned_cols=190 Identities=14% Similarity=0.117 Sum_probs=118.5
Q ss_pred CCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCC--CCCC-CccCCCeEeeeEEEcCCCceEEEEc
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI--YPSQ-QSDINGCWSGSATILPGEKPAIFYT 136 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al--~P~~-~~D~~gv~SGsav~~~dg~~~l~YT 136 (428)
||. ++..+++|+|++.... .....++|+||++|+.....+ .+.. .+...++|.+.+.. .+|+++|+|+
T Consensus 2 DP~-v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyys 72 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYFA 72 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEEE
Confidence 895 7788899999987431 357899999999999875432 2222 13446899999876 5899999999
Q ss_pred ccCC--CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC---CccE
Q 014220 137 GIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN---RKGL 211 (428)
Q Consensus 137 g~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~---~~G~ 211 (428)
.... ...+.+.+|++++..++ +..|+.. .+++... . ..-.||.++ .+ +|++||+++.... ....
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~--~----~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~ 141 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT--D----RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQN 141 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC--C----CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCcc
Confidence 8753 23456677877642112 3578874 2444222 1 234699965 43 5999999976432 2234
Q ss_pred EEEEEeCCCCCcEEcccccccCCC------CCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCeeeEEEEE
Q 014220 212 AILYRSKDFVHWIKAKHPLHSVKG------TGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284 (428)
Q Consensus 212 i~ly~S~Dl~~W~~~~~~l~~~~~------~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG~ 284 (428)
|.+.+.++...+.-....+..+.. ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 142 i~~~~l~~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 142 LYIAKMSNPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEEEECCCCCccCCcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 556665553344311111222211 1457999999997 5 78888887543344566654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.5e-09 Score=102.62 Aligned_cols=121 Identities=17% Similarity=0.202 Sum_probs=84.7
Q ss_pred CccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEc
Q 014220 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (428)
Q Consensus 57 w~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YT 136 (428)
..-|| .+++.+|+|+|+..... ....+...+|+||+||+..+.++.+. ..++|.+.++. .+|+++|+|+
T Consensus 14 ~~~DP-~i~~~~~~yY~~~t~~~-----~~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys 82 (280)
T cd09002 14 DYPDP-SILRDGEDYYMTHSSFK-----YTPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFP 82 (280)
T ss_pred CCCCC-EEEEECCEEEEEEcchh-----cCCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEE
Confidence 44599 47889999999764211 12357788999999999988877542 35789998876 6999999999
Q ss_pred ccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEee
Q 014220 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 137 g~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
.........+.+|++.+.. -.|++ |+.... ....||.|++ +++|++||+++.
T Consensus 83 ~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~~-------~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPE----GPWSK----PIDLKI-------GGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCC----CCCcC----CEecCC-------CCccCCceEE-cCCCCEEEEECC
Confidence 8754445667889886653 24653 221111 1235999654 578999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.9e-08 Score=95.45 Aligned_cols=202 Identities=17% Similarity=0.321 Sum_probs=127.3
Q ss_pred ccCCCCC---ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCC----CCCCccCCCeEeeeE
Q 014220 51 FQPPKNW---INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSA 123 (428)
Q Consensus 51 ~~p~~gw---~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~----P~~~~D~~gv~SGsa 123 (428)
..|+.|| +.||- +++++|+||||-..... ..|+-+-+. |++|+..+.|+. +.. -..+.|.+.+
T Consensus 14 ~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~------~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPqV 83 (303)
T cd08987 14 ISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA------GNYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQV 83 (303)
T ss_pred ccCCCCCeeeecCCe-EEEECCEEEEEEccCCC------CCceeeeec-ccCHhHhccchhhcccCCC--CCcccccCEE
Confidence 4677899 79995 67899999999765431 124333333 999999887653 221 2356788887
Q ss_pred EE-cCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEE
Q 014220 124 TI-LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (428)
Q Consensus 124 v~-~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ 202 (428)
+. .+++++||+|+.. ..++|+|+|..++ ..|... .|++... ........-|+.|+ . ++++.||+.
T Consensus 84 fyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P--~~ws~~--qpl~~~~--~~~~~~~~ID~~vI-~-Dd~~~YLff 149 (303)
T cd08987 84 FYFAPQNKWYLIYQWW------PAAYSTNSDISNP--NGWSAP--QPLFSGT--PNGSPGGWIDFWVI-C-DDTNCYLFF 149 (303)
T ss_pred eeeccCCEEEEEEecC------ceEEEeCCCCCCC--CccCCC--cccccCc--ccCCCCCccceeEE-e-CCCCEEEEE
Confidence 72 3689999999951 1468889888776 467763 5777532 11223456899974 4 477788887
Q ss_pred eeecCCccEEEEEEeC-CCCCcEEc-ccc--ccc-CCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCe
Q 014220 203 GSKINRKGLAILYRSK-DFVHWIKA-KHP--LHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKH 277 (428)
Q Consensus 203 ga~~~~~G~i~ly~S~-Dl~~W~~~-~~~--l~~-~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~ 277 (428)
... .| .+|+|+ .+.+.-.. ++. +.. .......|-|++++++ | +.+++|++++.+..+
T Consensus 150 ~~d---nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~ 211 (303)
T cd08987 150 SDD---NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDG 211 (303)
T ss_pred ecC---CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCC
Confidence 542 24 577762 22222110 111 111 1234689999999998 5 248999999876545
Q ss_pred eeEEEEEeeCC--CCcccCC
Q 014220 278 EYYTVGTYSTA--KDRYVPD 295 (428)
Q Consensus 278 ~~Y~vG~~d~~--~~~f~p~ 295 (428)
..|+++ +-.. .|.++|.
T Consensus 212 ~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 212 GRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred CCeEEE-EEcCCCCCCceec
Confidence 568887 4322 3455543
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.1e-08 Score=95.49 Aligned_cols=171 Identities=18% Similarity=0.160 Sum_probs=102.0
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcc
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG 137 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 137 (428)
.-||. +++++|+|+|+-.... +..+|+||++|+..+.++. ..++|.+++.. .+|+++++++.
T Consensus 3 ~~DP~-i~~~~g~YY~~~T~~~----------~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 3 AADPV-VILFKGEYYLFASMSG----------GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCCe-EEEECCEEEEEEeCCC----------CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 36995 7788999998865421 2678999999999987764 46789999876 58886665553
Q ss_pred cCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEE--
Q 014220 138 IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY-- 215 (428)
Q Consensus 138 ~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly-- 215 (428)
. .+.+|+|++...+ .|... + .. ......||.|+ .+++|+.||++|.... .+ |.+.
T Consensus 65 ~------~~~v~~s~~p~gp---~w~~~----~--~~-----~~~~~IDp~vf-~DdDGk~Yl~~g~~~~-~~-i~~~eL 121 (295)
T cd08982 65 Y------NSRIYKTADPLSG---PWEEV----D--KS-----FPPGLADPALF-IDDDGRLYLYYGCSNN-YP-LRGVEV 121 (295)
T ss_pred C------CceEEEeCCCCCC---Ccccc----c--cc-----cCCCccCCceE-ECCCCCEEEEEecCCC-CC-eEEEEE
Confidence 2 2457888765321 24431 0 01 11235799964 5578999999975321 11 1111
Q ss_pred ----------------EeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCeee
Q 014220 216 ----------------RSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEY 279 (428)
Q Consensus 216 ----------------~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~ 279 (428)
.+..-..|+..+............|-|.+++.+ | +++|++|........
T Consensus 122 ~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~ 186 (295)
T cd08982 122 DPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNT 186 (295)
T ss_pred CcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCc
Confidence 122223455433211111123467889888865 5 788888865433334
Q ss_pred EEEEE
Q 014220 280 YTVGT 284 (428)
Q Consensus 280 Y~vG~ 284 (428)
|.+|-
T Consensus 187 Y~v~~ 191 (295)
T cd08982 187 YADGV 191 (295)
T ss_pred EeEEE
Confidence 55444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.1e-08 Score=100.00 Aligned_cols=200 Identities=19% Similarity=0.151 Sum_probs=119.9
Q ss_pred CCCCccCCcceEE--------ECCEEEEEEeeCCCC----CCCCCcEEEEEEeCCCC----CCccCCCCCCCCCCc-cCC
Q 014220 54 PKNWINDPNGVMI--------YKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDLI----NWIPHDPAIYPSQQS-DIN 116 (428)
Q Consensus 54 ~~gw~nDPng~~~--------~~G~YHlFYq~~p~~----~~~g~~~Wgha~S~Dlv----~W~~~~~al~P~~~~-D~~ 116 (428)
+.=|+.|-+ ++. ++|.--+|-+..+.. ..|+..++++.-|++.. +|+..+.++..+... ...
T Consensus 52 ~dldVWDsW-PLqd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s 130 (428)
T PF02435_consen 52 DDLDVWDSW-PLQDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGS 130 (428)
T ss_dssp TE-EEEEEE-EEE-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCE
T ss_pred cceeeeccc-eeecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccC
Confidence 355666643 333 478666666666543 35678899999999998 999999877555431 234
Q ss_pred CeEeeeEEEcC-CCceEEEEcccCC--C--CcceE-----EEEEEcCCCCCccceeEecCCCceecCCC--C---CCCCC
Q 014220 117 GCWSGSATILP-GEKPAIFYTGIDP--H--NRQVQ-----NLAVPKNLSDPYLREWVKSPKNPLMAPDA--M---NQINT 181 (428)
Q Consensus 117 gv~SGsav~~~-dg~~~l~YTg~~~--~--~~~~q-----~lA~S~D~~d~~l~~w~k~~~nPvi~~~~--~---~~~~~ 181 (428)
--|||||++.. ||++.||||++.. . ..|+. +++.+.+. .--+..|++. ..++.++. + .....
T Consensus 131 ~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe~DG~~Yqt~~Q~~~ 207 (428)
T PF02435_consen 131 REWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFEGDGKHYQTYEQNPG 207 (428)
T ss_dssp EEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES--SSSB--HHHHHH
T ss_pred cEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeeccchhhhhChhhcCC
Confidence 57999999987 7999999999643 1 22322 12222221 1123345543 35555431 0 00112
Q ss_pred CCccCCeEEEECCCCeEEEEEeeec---C------------------------------CccEEEEEEeCC--CCCcEEc
Q 014220 182 SSFRDPTTAWLGPDKRWRVIIGSKI---N------------------------------RKGLAILYRSKD--FVHWIKA 226 (428)
Q Consensus 182 ~~~RDP~V~~~~~~g~y~Mv~ga~~---~------------------------------~~G~i~ly~S~D--l~~W~~~ 226 (428)
..||||++|-...+|+-||+.-+.. + ..|+|.+.+.+| +..|+..
T Consensus 208 ~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~ 287 (428)
T PF02435_consen 208 YAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELL 287 (428)
T ss_dssp ---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEE
T ss_pred ccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEe
Confidence 5799999653336899999985432 0 146888888754 4579988
Q ss_pred ccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 014220 227 KHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (428)
Q Consensus 227 ~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~ 272 (428)
..++.+..-....|.|++++++ | ||+|+.+.
T Consensus 288 ~PL~~a~~v~de~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 288 PPLLSANGVNDELERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp EEEEEETTTBS-EEEEEEEEET--T-------------EEEEEEEE
T ss_pred CcceecccccccccCCcEEEEC--C-------------EEEEEEEe
Confidence 6444444445689999999998 6 88887654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.2e-08 Score=95.11 Aligned_cols=149 Identities=20% Similarity=0.300 Sum_probs=110.2
Q ss_pred CCcceEEECCEEEEEEee------CCCCCCCCCcEEEEEEeCCCCC-CccCC-CCCCC-CCCccCCCeEeeeEEEcCCCc
Q 014220 60 DPNGVMIYKGIYHLFYQY------NPKGAVWGNIVWAHSTSKDLIN-WIPHD-PAIYP-SQQSDINGCWSGSATILPGEK 130 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~------~p~~~~~g~~~Wgha~S~Dlv~-W~~~~-~al~P-~~~~D~~gv~SGsav~~~dg~ 130 (428)
.| ++++.++++||+|+- .+. ...+.+.|.|+|+++ |+.++ +.+.| ..++|..||..+.++.. +++
T Consensus 33 Np-av~~~~~~~~~l~Rv~~~yye~~~----~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~~ 106 (314)
T COG2152 33 NP-AVVLVGGELLLLYRVVEGYYEDHS----SISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GGR 106 (314)
T ss_pred cc-eeEEECCEEEEEEEEeccccccCc----cceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CCE
Confidence 35 688899999999997 332 346889999999999 98764 77889 55777899999999874 899
Q ss_pred eEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC---
Q 014220 131 PAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--- 207 (428)
Q Consensus 131 ~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~--- 207 (428)
++|.|||.+ +..+..++|++.|- .+|+|.+ +++.+ +.||-.++=...+|+|.|+---...
T Consensus 107 y~mtYTa~s-~~g~~~~la~t~~f-----~n~~rig--~i~~p---------dn~~~~lfP~~~ngk~~~lhr~~~~~~~ 169 (314)
T COG2152 107 YYMTYTAYS-DKGPRLALAVTKDF-----LNWERIG--AIFPP---------DNKDAALFPKKINGKYALLHRPVLGEYG 169 (314)
T ss_pred EEEEEEecC-CCCcccchhhhhhh-----hhhhhcc--cccCC---------CCCCceEeeEEecCcEEEEEeecccccC
Confidence 999999985 45667788988874 6799862 44422 2345443212246889888653332
Q ss_pred CccEEEEEEeCCCCCcEEcccccc
Q 014220 208 RKGLAILYRSKDFVHWIKAKHPLH 231 (428)
Q Consensus 208 ~~G~i~ly~S~Dl~~W~~~~~~l~ 231 (428)
..+-|.+..|.|+.+|.....++.
T Consensus 170 ~~~niwia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 170 MKGNIWIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred ccCceEEEEcCCccCCCccceeec
Confidence 256799999999999987655444
|
|
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.1e-07 Score=93.43 Aligned_cols=108 Identities=19% Similarity=0.263 Sum_probs=81.6
Q ss_pred cCCcceEEECCEEEEEEeeCCCC----CCCCCcEEEEEEeCCC-CCCcc-CCCCCCCCC-CccCCCeEeeeEEEcCCCce
Q 014220 59 NDPNGVMIYKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDL-INWIP-HDPAIYPSQ-QSDINGCWSGSATILPGEKP 131 (428)
Q Consensus 59 nDPng~~~~~G~YHlFYq~~p~~----~~~g~~~Wgha~S~Dl-v~W~~-~~~al~P~~-~~D~~gv~SGsav~~~dg~~ 131 (428)
.+|. +++.+|+|+|||...... .......+|.|+|+|+ .+|++ ..++|.|.. .||..++..++++...+|++
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 5784 678899999999976531 1223568999999994 69998 456777754 37888899999987558999
Q ss_pred EEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCcee
Q 014220 132 AIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLM 171 (428)
Q Consensus 132 ~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi 171 (428)
+|+|+|.... ..+.+++|+|.|.. .+|+|...+||+
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 9999998642 45778999998753 479997656654
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.8e-07 Score=86.99 Aligned_cols=133 Identities=20% Similarity=0.208 Sum_probs=86.7
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCC--CCCCCCCCccCCCeEeeeEEEcC-CCceEEE
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD--PAIYPSQQSDINGCWSGSATILP-GEKPAIF 134 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~--~al~P~~~~D~~gv~SGsav~~~-dg~~~l~ 134 (428)
+-.|+ ++..+|+|||||..+... .......++|+|+|+++|+..+ +.+.+...++...+-.+.++.++ +|+++|+
T Consensus 62 ~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~ 139 (280)
T cd08995 62 IGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWML 139 (280)
T ss_pred ceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEE
Confidence 45564 567899999999876432 1134578999999999999865 33432223333344467777643 5899999
Q ss_pred EcccCC----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec
Q 014220 135 YTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (428)
Q Consensus 135 YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~ 206 (428)
|.+... .....+.++.|.| |.+|+.. .+++.+. . ...+.=|.+ ++ .+|+|+|+++.+.
T Consensus 140 ~g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~--~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 140 LATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPG--L---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred EEeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCC--C---cceeecceE-EE-ECCEEEEEEEecc
Confidence 976542 2334566677766 5799875 4665432 1 123567875 44 4789999998764
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.1e-07 Score=92.80 Aligned_cols=103 Identities=17% Similarity=0.278 Sum_probs=79.4
Q ss_pred CCCeEeeeEEEcCCCc--eEEEEcccCCCCcc-eEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEE
Q 014220 115 INGCWSGSATILPGEK--PAIFYTGIDPHNRQ-VQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAW 191 (428)
Q Consensus 115 ~~gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~ 191 (428)
...||.+.|++. +|+ ++|+|.+....... .+++|.|.|+ .+|++. .+||+.|. ..++.....||.|+.
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~--~~~e~~GvEDPRVt~ 99 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPD--TDYEEWGVEDPRVTK 99 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE---SSTTHTEEEEEEEEE
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccC--CCCcccCccceeEEE
Confidence 467999999865 554 89999887655444 7999999997 689886 57999776 445666789999876
Q ss_pred ECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEccc
Q 014220 192 LGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKH 228 (428)
Q Consensus 192 ~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~ 228 (428)
. +++|+|++.+......++.+.+|+|+.+|+..+.
T Consensus 100 i--~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~ 134 (312)
T PF04041_consen 100 I--DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGK 134 (312)
T ss_dssp E--TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEEC
T ss_pred E--CCEEEEEEEEecCCCcccceEEccchHhhEEecc
Confidence 5 6799999998876667889999999999999874
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.1e-06 Score=84.05 Aligned_cols=157 Identities=16% Similarity=0.148 Sum_probs=98.5
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCCCC-C-CCCCccCCCeEeeeEEEcCCCceE
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAI-Y-PSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~al-~-P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
+-+..| -+++.+|+|||||..+..+ .....+++|+|+|.. .|+..+..+ . +.. ..++..+++++++||+++
T Consensus 60 ~~~waP-~v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~---~~~~~Dp~v~~d~dG~~Y 133 (287)
T cd08999 60 GDFWAP-DVSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPEG---EGGAIDPSFFTDTDGKRY 133 (287)
T ss_pred CCccCc-eEEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCCC---CCCccCCCeEECCCCCEE
Confidence 345677 4788999999999876543 235679999999965 899875332 2 221 234566888886689999
Q ss_pred EEEcccCCC--CcceEEEE-EEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec--C
Q 014220 133 IFYTGIDPH--NRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--N 207 (428)
Q Consensus 133 l~YTg~~~~--~~~~q~lA-~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~--~ 207 (428)
|+|.+.... ..+.+.++ +|.| +.+|.... ..++.+. .......+.-|.++ + .+|+|||++++.. .
T Consensus 134 l~~~~~~~~~~~~~~i~~~~ls~d-----~~~~~~~~-~~i~~~~--~~~~~~~~EgP~i~-k-~~g~yyl~~S~~~~~~ 203 (287)
T cd08999 134 LVWKSDGNSIGKPTPIYLQELSAD-----GLTLTGEP-VRLLRND--EDWEGPLVEAPYLV-K-RGGYYYLFYSAGGCCS 203 (287)
T ss_pred EEEeccCCCCCCCceEEEEEeCCC-----CccccCCc-Eeeeccc--ccccCCceEeeEEE-E-ECCEEEEEEEcCCccC
Confidence 999764321 11223343 4444 25565321 2333322 22233456789864 4 4899999998653 1
Q ss_pred C--ccEEEEEEeCCCC-CcEEccc
Q 014220 208 R--KGLAILYRSKDFV-HWIKAKH 228 (428)
Q Consensus 208 ~--~G~i~ly~S~Dl~-~W~~~~~ 228 (428)
. .=.+.+++|+++. .|+....
T Consensus 204 ~~~~y~i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 204 GASTYAVGVARSKSLLGPYVKAPG 227 (287)
T ss_pred CCCCEEEEEEEeCCCcCCcCCCCC
Confidence 1 2357889999987 7886543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.8e-06 Score=81.24 Aligned_cols=154 Identities=10% Similarity=0.019 Sum_probs=96.0
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCCC-CCCCCCccCCCeEeeeEEEcCCCceE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPA-IYPSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~a-l~P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
.+-+.-|. +++++|+|||||..... .+....++|+|+|.. .|++.... +.+ ...+......+++++++||+++
T Consensus 61 ~~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~y 135 (274)
T cd08990 61 KGQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAY 135 (274)
T ss_pred cCCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEE
Confidence 45577885 78899999999987643 235679999999976 79987543 322 2222344567888887789999
Q ss_pred EEEcccCCCCcceEEEE-EEcCCCCCccceeEecCCCceecCCC-CCCCCCCCccCCeEEEECCCCeEEEEEeeecCCcc
Q 014220 133 IFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDA-MNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210 (428)
Q Consensus 133 l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~nPvi~~~~-~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G 210 (428)
|+|.+. +.+.++ .+.| +.+|+.. ..++..++ ..........-|.++ + .+|+|||++++.. ..
T Consensus 136 l~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i~-k-~~G~YYl~yS~~~--~~ 199 (274)
T cd08990 136 LYWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWVH-K-RNGTYYLSYSTGD--PE 199 (274)
T ss_pred EEECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeEE-E-ECCEEEEEEECCC--Cc
Confidence 999864 223344 3333 3566532 22332110 001112234578854 4 4899999998753 34
Q ss_pred EEEEEEeCCCC-CcEEcccc
Q 014220 211 LAILYRSKDFV-HWIKAKHP 229 (428)
Q Consensus 211 ~i~ly~S~Dl~-~W~~~~~~ 229 (428)
.+.+.+|+++. .|+..+.+
T Consensus 200 ~~~~a~s~~p~GP~~~~g~~ 219 (274)
T cd08990 200 EIAYATSDSPLGPFTYRGVI 219 (274)
T ss_pred EEEEEEcCCCCCCcccCcEE
Confidence 67778888875 47655433
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.60 E-value=8e-07 Score=87.18 Aligned_cols=89 Identities=20% Similarity=0.330 Sum_probs=63.6
Q ss_pred CCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-----CCccEEEEEEeCCCCCcEEcccccccC-CCCCeee
Q 014220 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----NRKGLAILYRSKDFVHWIKAKHPLHSV-KGTGMWE 240 (428)
Q Consensus 167 ~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-----~~~G~i~ly~S~Dl~~W~~~~~~l~~~-~~~~~wE 240 (428)
++||+.+. . ....+|||+|++..++|+|||+..... .....|.+++|+||++|+..+..+... ..+.+|
T Consensus 5 ~~pvl~~~--~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W- 79 (276)
T cd08983 5 GNPVLTST--A--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW- 79 (276)
T ss_pred CceEEeCC--c--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-
Confidence 68999765 2 357899999876546889999887542 123368999999999999876433222 223467
Q ss_pred cCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 241 CPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 241 CPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
+|+++..+..| +|+|.+|..
T Consensus 80 APev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 80 APEAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred CccceEcCCCC-------------eEEEEEecc
Confidence 99999986433 788888864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.58 E-value=9.4e-06 Score=79.85 Aligned_cols=163 Identities=13% Similarity=0.153 Sum_probs=95.8
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l 133 (428)
...+..|. +++.+|+|||||...... ......++|+|+|.. .|+..+..+.+.. .....++++.++||+++|
T Consensus 52 ~~~~waP~-v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl 124 (294)
T cd08991 52 RRGFWAPE-VYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYL 124 (294)
T ss_pred CCcEEccE-EEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEE
Confidence 34566885 889999999999876432 235678999999976 7887654333321 234568888877799999
Q ss_pred EEcccCCCC--cceEEEEEEcCCCCCccceeEecCC---CceecC-------C-CC-CCCCCCCccCCeEEEECCCCeEE
Q 014220 134 FYTGIDPHN--RQVQNLAVPKNLSDPYLREWVKSPK---NPLMAP-------D-AM-NQINTSSFRDPTTAWLGPDKRWR 199 (428)
Q Consensus 134 ~YTg~~~~~--~~~q~lA~S~D~~d~~l~~w~k~~~---nPvi~~-------~-~~-~~~~~~~~RDP~V~~~~~~g~y~ 199 (428)
+|+...... ......+.+.|. .+|..... .|+..+ + .. ...+.....-|.++ + .+|+||
T Consensus 125 ~~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~-k-~~g~yy 197 (294)
T cd08991 125 YYSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVL-K-HNGRYY 197 (294)
T ss_pred EEEecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEEE-E-ECCEEE
Confidence 998654321 223344455552 34432111 122111 0 00 00111234568754 4 478999
Q ss_pred EEEeeec-CC-ccEEEEEEeCC-CCCcEEc-ccccc
Q 014220 200 VIIGSKI-NR-KGLAILYRSKD-FVHWIKA-KHPLH 231 (428)
Q Consensus 200 Mv~ga~~-~~-~G~i~ly~S~D-l~~W~~~-~~~l~ 231 (428)
|++.+.. .. .-.+.+++|++ +-.|+.. ..|+.
T Consensus 198 l~ys~~~~~~~~y~~~~a~s~~~~gp~~~~~~~pl~ 233 (294)
T cd08991 198 LTYSANHYENEDYGVGYATADSPLGPWTKYSNNPIL 233 (294)
T ss_pred EEEECCCCCCCCceEEEEEcCCCCCCcEecCCCceE
Confidence 9987643 11 12467888887 4679864 24444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.1e-06 Score=81.54 Aligned_cols=156 Identities=13% Similarity=0.090 Sum_probs=97.4
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (428)
.+-+.+|. +++.+|+|+|||.....+ ......+.|+|+|+.+|........+ .. ...++..++++.++||+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~~~-~~-~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIRPP-TS-NNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccCcC-cc-CCCCccCcceEEcCCCCEEEE
Confidence 46688995 788999999999987542 23457999999999998765321111 11 224567899988766999999
Q ss_pred EcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC--CccE
Q 014220 135 YTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGL 211 (428)
Q Consensus 135 YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~--~~G~ 211 (428)
|.+.... ....+.++.+.+. ..+.. ..+++... ..........|.++ + .+|+|||++.+... ..-.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~--~~~~~~~~EgP~~~-k-~~g~yyl~ys~~~~~~~~y~ 199 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSAS--SGNNNAVTEGPTIF-K-KNGYYYLTYSANGTGDYGYN 199 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeee--eccCCCceEccEEE-E-ECCEEEEEEEeCCCCCCCce
Confidence 9876421 1234555655442 12222 22332111 11122346789864 4 46899999977542 2346
Q ss_pred EEEEEeCCCC-CcEEc
Q 014220 212 AILYRSKDFV-HWIKA 226 (428)
Q Consensus 212 i~ly~S~Dl~-~W~~~ 226 (428)
+.+++|++.. .|+..
T Consensus 200 ~~~~~s~~~~Gp~~~~ 215 (271)
T cd08978 200 IGYATSDSIDGPYVKK 215 (271)
T ss_pred EEEEECCCCCCCcCcC
Confidence 7788888864 36543
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.8e-06 Score=79.05 Aligned_cols=157 Identities=14% Similarity=0.131 Sum_probs=100.2
Q ss_pred CCCccCCcceEEEC-CEEEEEEeeCCCCCCCCCcEEEEEEeCCCCC-CccCC--CCCCCC--CCccCCCeEeeeEEEcCC
Q 014220 55 KNWINDPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSKDLIN-WIPHD--PAIYPS--QQSDINGCWSGSATILPG 128 (428)
Q Consensus 55 ~gw~nDPng~~~~~-G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~-W~~~~--~al~P~--~~~D~~gv~SGsav~~~d 128 (428)
.+-+..|. +++.+ |+|+|||..... .......+.|+|+|+.. |+... +.+ +. ...+...+..++++.++|
T Consensus 57 ~~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dp~v~~d~d 132 (286)
T cd08772 57 SGGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVL-PDNPPAADVSNFRDPFVFEDDD 132 (286)
T ss_pred CCcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccc-cCCCCccccccccCCeEEEcCC
Confidence 34577885 67777 999999987643 12356799999999975 56442 222 22 122334567888888766
Q ss_pred CceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec--
Q 014220 129 EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-- 206 (428)
Q Consensus 129 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-- 206 (428)
|+++|+|.+........+.+|.|+|. .+|++....+++... .....+.-|.++ + .+|+|||++++..
T Consensus 133 G~~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~----~~~~~~E~P~~~-~-~~g~~yL~~s~~~~~ 201 (286)
T cd08772 133 GKWYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEG----EGGKQIEGPGLL-K-KNGKYYLFYSINGTG 201 (286)
T ss_pred CCEEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeec----cCCCceeccEEE-E-ECCEEEEEEEcCCCc
Confidence 99999998765333456788888774 678764322222211 123456789865 4 4789999998754
Q ss_pred --CCccEEEEEEeCC-CCCcEEc
Q 014220 207 --NRKGLAILYRSKD-FVHWIKA 226 (428)
Q Consensus 207 --~~~G~i~ly~S~D-l~~W~~~ 226 (428)
...-.+.+++|++ +-.|+..
T Consensus 202 ~~~~~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 202 RVDSTYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CCCCCcceEEEEccCCCCCcccC
Confidence 1233566777765 3456543
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.9e-06 Score=84.07 Aligned_cols=121 Identities=18% Similarity=0.185 Sum_probs=71.9
Q ss_pred ccCCeEEEECCCCeEEEEEeeecC---------CccEEEEEEeCCCCCcEEcccccccCC--------------CCCeee
Q 014220 184 FRDPTTAWLGPDKRWRVIIGSKIN---------RKGLAILYRSKDFVHWIKAKHPLHSVK--------------GTGMWE 240 (428)
Q Consensus 184 ~RDP~V~~~~~~g~y~Mv~ga~~~---------~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------------~~~~wE 240 (428)
+|||+|+ ++.+|.|||+..+... ..+.|.+|+|+||++|+..+..+.... .....+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999975 4457788888775431 134688999999999998775442211 123566
Q ss_pred cCceEEeccCCCCCccccCCCCCceeEEEEeeCCC--CeeeEEEEEeeCCCCcccCCCCCccCCCccccccCCCcccceE
Q 014220 241 CPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT--KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTF 318 (428)
Q Consensus 241 CPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~--~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~fYA~qtf 318 (428)
+|+++.++ | +|+|.+|.... ......+..-+...+.|+..... ..+ ..-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~--~~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPL--FPGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCC--CCccCCceE
Confidence 99999987 5 88888876531 12223333323223445422110 000 012346678
Q ss_pred eeCCCCcEEEE
Q 014220 319 FDGAKNRRVLW 329 (428)
Q Consensus 319 ~d~~~gr~il~ 329 (428)
.|. +|+.+|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 875 6888776
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.6e-06 Score=81.83 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=55.8
Q ss_pred CCccCCeEEEECCCCeEEEEEeeecCC----ccEEEEEEeCCCCCcEEcccccccCC---CCCeeecCceEEeccCCCCC
Q 014220 182 SSFRDPTTAWLGPDKRWRVIIGSKINR----KGLAILYRSKDFVHWIKAKHPLHSVK---GTGMWECPDFFPVSTYGLNG 254 (428)
Q Consensus 182 ~~~RDP~V~~~~~~g~y~Mv~ga~~~~----~G~i~ly~S~Dl~~W~~~~~~l~~~~---~~~~wECPdlf~l~~~g~~~ 254 (428)
..+|||+|++.+++|.|||+..+.... ...|.+|+|+||++|+..+..+.... ......+|++++.+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 458999988765689999998765321 12478999999999998775443221 12457899999886 5
Q ss_pred ccccCCCCCceeEEEEeeC
Q 014220 255 LDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 255 ~~~s~~~~~~~~vl~~s~~ 273 (428)
+|+|.+|..
T Consensus 79 ----------~yyly~s~~ 87 (291)
T cd08981 79 ----------RYYMFATFH 87 (291)
T ss_pred ----------EEEEEEEec
Confidence 888887764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.4e-05 Score=77.92 Aligned_cols=72 Identities=21% Similarity=0.280 Sum_probs=51.6
Q ss_pred CccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccC---------CCCCeeecCceEEeccCCCC
Q 014220 183 SFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV---------KGTGMWECPDFFPVSTYGLN 253 (428)
Q Consensus 183 ~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~---------~~~~~wECPdlf~l~~~g~~ 253 (428)
.+.||.|+. .++.|||+.++..... .+.+++|+||.+|+..+..+... ....+| +|+++.++ |
T Consensus 7 ~~~DP~ii~--~~~~yY~~~t~~~~~~-g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W-AP~v~~~~--G-- 78 (269)
T cd08989 7 DNPDPSIIR--AGDDYYMASSTFEWFP-GVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW-APCLSYYD--G-- 78 (269)
T ss_pred CCCCCcEEE--ECCeEEEEECccccCC-CcEEEECCccCCCEEccccccCccccccccCCCCCcEE-cceEEEEC--C--
Confidence 357999764 3788999986543222 37899999999999987544321 123466 99999987 5
Q ss_pred CccccCCCCCceeEEEEeeC
Q 014220 254 GLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 254 ~~~~s~~~~~~~~vl~~s~~ 273 (428)
+|+|.++..
T Consensus 79 -----------~yy~yy~~~ 87 (269)
T cd08989 79 -----------KFWLIYTAV 87 (269)
T ss_pred -----------EEEEEEecc
Confidence 888888764
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.1e-05 Score=77.57 Aligned_cols=114 Identities=18% Similarity=0.174 Sum_probs=77.6
Q ss_pred EcCCCceEEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEE
Q 014220 125 ILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVI 201 (428)
Q Consensus 125 ~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv 201 (428)
+..+|+++|||+.+... +....++|+|+| |.||++.+ +++.++ ...+....-.+.++.. .+|+++|+
T Consensus 10 ~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~D-----lv~W~~~~--~al~p~--~~~d~~g~~sGsav~~-~~g~~~~~ 79 (298)
T cd08996 10 VYFNGKYHLFYQYNPFGPVWGNMHWGHATSKD-----LVHWEHLP--VALAPD--DPYDSGGCFSGSAVVD-DNGKLVLF 79 (298)
T ss_pred eEECCEEEEEEcCCCCCCCCCCcEEEEEEecC-----ccceeECC--cccCCC--CcccCCeEEeCeEEEc-CCCcEEEE
Confidence 33589999999976432 345678899988 58999863 445443 2334455667886643 44899999
Q ss_pred Eeeec----CCccEEEEEEeC-CCCCcEEccc-cccc--CCCCCeeecCceEEec
Q 014220 202 IGSKI----NRKGLAILYRSK-DFVHWIKAKH-PLHS--VKGTGMWECPDFFPVS 248 (428)
Q Consensus 202 ~ga~~----~~~G~i~ly~S~-Dl~~W~~~~~-~l~~--~~~~~~wECPdlf~l~ 248 (428)
+.+.. .....+.++.|+ |+.+|+..+. ++.. ......++-|.+|+.+
T Consensus 80 YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~~ 134 (298)
T cd08996 80 YTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWHD 134 (298)
T ss_pred EeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeEC
Confidence 98764 234467788887 8999998653 3321 2234468899999987
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.23 E-value=2.4e-05 Score=76.93 Aligned_cols=78 Identities=19% Similarity=0.391 Sum_probs=55.7
Q ss_pred CCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEE
Q 014220 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246 (428)
Q Consensus 167 ~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~ 246 (428)
.||||.. .+.||.|+. .++.|||+.++.. ..+.|.+|+|+||.+|+..+..+. .....+| +|++++
T Consensus 7 ~nPv~~~---------~~~DP~i~~--~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~ 72 (280)
T cd09002 7 RNPILAG---------DYPDPSILR--DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCK 72 (280)
T ss_pred eCCccCC---------CCCCCEEEE--ECCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEE
Confidence 4788842 257999764 3689999765422 233588999999999998764342 2345688 899999
Q ss_pred eccCCCCCccccCCCCCceeEEEEeeC
Q 014220 247 VSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 247 l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
.+ | |++|.++..
T Consensus 73 ~~--g-------------kyy~yys~~ 84 (280)
T cd09002 73 YD--G-------------RYYIYFPAI 84 (280)
T ss_pred EC--C-------------EEEEEEEee
Confidence 87 5 888887764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.2e-05 Score=75.19 Aligned_cols=154 Identities=14% Similarity=0.098 Sum_probs=92.4
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC--CCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL--INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dl--v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
.+-+..|. +++.+|+|||||..+..+. .....++|+|+|+ -.|+..++++.+....+...+..++++.++||+++
T Consensus 55 ~~~~wAP~-v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Y 131 (288)
T cd08998 55 SGNLWAPD-VIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLW 131 (288)
T ss_pred CCCccCCe-EEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEE
Confidence 45577885 7789999999998765331 3457899999999 69998876665543212334567888887789999
Q ss_pred EEEcccCCCCcceEEEE-EEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-C---
Q 014220 133 IFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-N--- 207 (428)
Q Consensus 133 l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-~--- 207 (428)
|+|.+... .+.++ .+.|.+.+ ..+... ...++..+ . .......|+++ + .+|+|||++++.. .
T Consensus 132 l~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~--~--~~~~~Egp~~~-k-~~g~YYl~~S~~~~~~~~ 198 (288)
T cd08998 132 LSFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRP--R--GHGAIEAPYII-Y-RGGYYYLFVSYGGCCAGE 198 (288)
T ss_pred EEeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccC--C--CCCceeeeEEE-E-eCCEEEEEEEcchhcCCC
Confidence 99975321 12233 22221111 122100 01122211 1 11235689864 4 4799999986532 1
Q ss_pred Ccc-EEEEEEeCCCC-CcE
Q 014220 208 RKG-LAILYRSKDFV-HWI 224 (428)
Q Consensus 208 ~~G-~i~ly~S~Dl~-~W~ 224 (428)
..+ ++.+++|+++. -|+
T Consensus 199 ~~~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 199 DSTYNIRVGRSKSITGPYV 217 (288)
T ss_pred CCceEEEEEEcCCCCCCcC
Confidence 112 57899998864 365
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=98.07 E-value=0.00012 Score=73.79 Aligned_cols=147 Identities=16% Similarity=0.146 Sum_probs=92.4
Q ss_pred ECCEEEEEEeeCCCC---CCCCCcEEEEEEeCCC----CCCccCCCCCCCCCC-cc-------------CCCeEeeeEEE
Q 014220 67 YKGIYHLFYQYNPKG---AVWGNIVWAHSTSKDL----INWIPHDPAIYPSQQ-SD-------------INGCWSGSATI 125 (428)
Q Consensus 67 ~~G~YHlFYq~~p~~---~~~g~~~Wgha~S~Dl----v~W~~~~~al~P~~~-~D-------------~~gv~SGsav~ 125 (428)
.+|++||||..+-.. ........++++|+|+ ..|+.+...+.+++. |+ ....-.+.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 469999999987421 1122467999999998 455545445555532 21 12234567776
Q ss_pred cC-CCceEEEEcccCCCC---------------------------cceEEEEEEcCCCCCccceeEecCCCceecCCCCC
Q 014220 126 LP-GEKPAIFYTGIDPHN---------------------------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN 177 (428)
Q Consensus 126 ~~-dg~~~l~YTg~~~~~---------------------------~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~ 177 (428)
++ +|+++|+++++.... .-.+++|++.+. +|.+|+-. .|++.+.
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~--- 231 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEAN--- 231 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCC---
Confidence 54 588999999875421 123567776542 36789975 4887654
Q ss_pred CCCCCCccCCeEEEECCCCeEEEEEeeecC-------CccEEEEEEeCCCC-CcE
Q 014220 178 QINTSSFRDPTTAWLGPDKRWRVIIGSKIN-------RKGLAILYRSKDFV-HWI 224 (428)
Q Consensus 178 ~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~-------~~G~i~ly~S~Dl~-~W~ 224 (428)
. -...+..|.++ + .+|+|||+..++.. +...+..|.|+++. .|+
T Consensus 232 ~-v~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~ 283 (349)
T cd08997 232 G-VNDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYK 283 (349)
T ss_pred C-cCCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCc
Confidence 2 13458899964 4 48999999875542 11245667888875 354
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00041 Score=67.65 Aligned_cols=142 Identities=8% Similarity=0.026 Sum_probs=86.7
Q ss_pred CccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCcc-CC-CCCCCCCCccCCCeEeeeEEEcCCCceEE
Q 014220 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIP-HD-PAIYPSQQSDINGCWSGSATILPGEKPAI 133 (428)
Q Consensus 57 w~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~-~~-~al~P~~~~D~~gv~SGsav~~~dg~~~l 133 (428)
-+.-|. +++.+|+|+|||..+ ...++|+|+|.. .|+. .+ +.+.+.. .......++++.++||+++|
T Consensus 65 ~~wAP~-v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl 133 (275)
T cd09004 65 AAWAPS-VIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYL 133 (275)
T ss_pred CcCCCe-EEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEE
Confidence 355674 788999999999865 358899999965 7887 33 3343321 12345568888877899999
Q ss_pred EEcccCCCCcceEEE-EEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-C-Ccc
Q 014220 134 FYTGIDPHNRQVQNL-AVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-N-RKG 210 (428)
Q Consensus 134 ~YTg~~~~~~~~q~l-A~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-~-~~G 210 (428)
+|.+.. ...+ ..+.| +.+|+.. ..++... . ...+.-|.++ + .+|+|||++.+.. . ..-
T Consensus 134 ~~~~~~-----~~~i~~l~~d-----~~~~~~~--~~~~~~~--~---~~~~EgP~i~-k-~~G~yyl~ys~~~~~~~~Y 194 (275)
T cd09004 134 YWGGWG-----HCNVAKLNED-----MISFDGE--RDGSEIT--P---KNYFEGPFMF-K-RNGIYYLMWSEGGWTDPDY 194 (275)
T ss_pred EEcCcC-----CEEEEEECCC-----cccccCc--ceeeecc--C---CCceecceEE-E-ECCEEEEEEECCCCCCCCc
Confidence 997531 1223 33343 2455432 1121111 1 1235688854 5 4789999987754 1 222
Q ss_pred EEEEEEeCCCCC-cEEccc
Q 014220 211 LAILYRSKDFVH-WIKAKH 228 (428)
Q Consensus 211 ~i~ly~S~Dl~~-W~~~~~ 228 (428)
++.+++|+++.. |+....
T Consensus 195 ~~~ya~s~~~~GP~~~~~~ 213 (275)
T cd09004 195 HVAYAMADSPLGPFERPGN 213 (275)
T ss_pred eEEEEEcCCCCCCcccCCc
Confidence 577788888653 776543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.05 E-value=9.5e-05 Score=77.35 Aligned_cols=142 Identities=22% Similarity=0.322 Sum_probs=84.2
Q ss_pred EEEEEeCCCCCCccCCCCCCCCCC-------ccCCCeEeeeEEEcCCCceEEEEcccCCCC---cceEEEEEEcCCCCCc
Q 014220 89 WAHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEKPAIFYTGIDPHN---RQVQNLAVPKNLSDPY 158 (428)
Q Consensus 89 Wgha~S~Dlv~W~~~~~al~P~~~-------~D~~gv~SGsav~~~dg~~~l~YTg~~~~~---~~~q~lA~S~D~~d~~ 158 (428)
-.-+.|+||+||+.....|.+... -+..|||.+++. ..||+++|+||.+.... +...+..++....+
T Consensus 55 l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~-- 131 (549)
T COG3507 55 LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID-- 131 (549)
T ss_pred eeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC--
Confidence 456789999999998766666532 245789999987 58999999998765422 22223333332211
Q ss_pred cceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCC------ccEEEEEEeC---CCCCcEEcccc
Q 014220 159 LREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR------KGLAILYRSK---DFVHWIKAKHP 229 (428)
Q Consensus 159 l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~------~G~i~ly~S~---Dl~~W~~~~~~ 229 (428)
-.|.. |+..+. ..--||.++ .+++|+-||+.++...+ .+.++-..++ .+..+.+ + .
T Consensus 132 -G~WsD----pi~l~~-------~~~iDPslf-~D~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~-~ 196 (549)
T COG3507 132 -GPWSD----PIKLNG-------SNAIDPSLF-FDKDGRKWLVNGSWDGGIFMHSFAGIILQEYDKTTQKLVGQGY-K-I 196 (549)
T ss_pred -CCccc----ceecCC-------cCccCCcee-ecCCCCEEEEecccCCCcccccccceeeeeccccccccCCccc-e-e
Confidence 24653 333221 123599964 56899999999876532 1232222221 1333322 1 1
Q ss_pred cccCCCCCeeecCceEEec
Q 014220 230 LHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 230 l~~~~~~~~wECPdlf~l~ 248 (428)
+..+......|-|-+++.+
T Consensus 197 ~~~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 197 IFDGGNGGLTEGPHLYKKT 215 (549)
T ss_pred EeccCCCccccCceeeccC
Confidence 2333344578999888876
|
|
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.6e-05 Score=73.69 Aligned_cols=102 Identities=14% Similarity=0.241 Sum_probs=79.3
Q ss_pred CeEeeeEEEcCCCceEEEEccc-----CCCCcceEEEEEEcCCCCCccce-eEecCCCceecC-CCCCCCCCCCccCCeE
Q 014220 117 GCWSGSATILPGEKPAIFYTGI-----DPHNRQVQNLAVPKNLSDPYLRE-WVKSPKNPLMAP-DAMNQINTSSFRDPTT 189 (428)
Q Consensus 117 gv~SGsav~~~dg~~~l~YTg~-----~~~~~~~q~lA~S~D~~d~~l~~-w~k~~~nPvi~~-~~~~~~~~~~~RDP~V 189 (428)
++|.++++. .+++++|+|... ..+......+|.|+|+. + |++. .+|++.| . ...+.....||.|
T Consensus 30 ~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi-----~~~~~e-~ep~~~P~~--~~~e~~G~EDPRv 100 (314)
T COG2152 30 SVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDGI-----GEFEIE-PEPTLWPAN--YPYEIYGIEDPRV 100 (314)
T ss_pred EEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccCC-----CceecC-CcceEecCC--CchhhhcccCceE
Confidence 799999887 489999999873 22356677899999873 4 8886 4798876 3 2345667899997
Q ss_pred EEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccc
Q 014220 190 AWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHP 229 (428)
Q Consensus 190 ~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 229 (428)
+.. +++|+|.+.+..+.+.+..++.++|+.+|++.+..
T Consensus 101 t~I--~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i 138 (314)
T COG2152 101 TKI--GGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAI 138 (314)
T ss_pred EEE--CCEEEEEEEecCCCCcccchhhhhhhhhhhhcccc
Confidence 654 79999999998765667789999999999988743
|
|
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00013 Score=71.15 Aligned_cols=150 Identities=12% Similarity=0.064 Sum_probs=89.8
Q ss_pred CCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEccc
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGI 138 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 138 (428)
-|. +++.+|+|||||..... -.....+.|+|++.. .|+.....+.+ ...+..+++++++||+.+|+|.+.
T Consensus 69 AP~-i~~~~g~yy~y~~~~~~---~~~~~~~va~a~~~~Gp~~~~~~~~~~-----~~~~iD~~vf~d~dG~~Yl~~~~~ 139 (286)
T PF04616_consen 69 APE-IHYINGKYYMYYSDSGG---DAGSGIGVATADSPDGPWTDPGKIPIP-----GGNSIDPSVFVDDDGKYYLYYGSW 139 (286)
T ss_dssp EEE-EEEETTEEEEEEEEEST---STTEEEEEEEESSTTS-EEEEEEEEEE-----SSSSSSEEEEEETTSEEEEEEEES
T ss_pred CCe-EEEcCCeEEEEEEccCC---CCCcceeEEEeCCcccccccccceeec-----cccccCceEEEecCCCcEEeCccc
Confidence 353 67889999999992211 123568899999986 89887543322 233455888887779999999886
Q ss_pred CCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-CCccEEEEEE
Q 014220 139 DPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLAILYR 216 (428)
Q Consensus 139 ~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-~~~G~i~ly~ 216 (428)
... ..+.+.++...+. ..++.......+.... .........-|+++ + .+|+|||++.+.. ...-.+.+++
T Consensus 140 ~~~~~~~~i~~~~l~~d----~~~~~~~~~~~~~~~~--~~~~~~~~Egp~~~-k-~~g~yYl~~s~~~~~~~y~v~~~~ 211 (286)
T PF04616_consen 140 DNGDPGGGIYIAELDPD----GTSLTGEPVVVIFPGD--EGWDGGVVEGPFVF-K-HGGKYYLFYSAGGTGSPYQVGYAR 211 (286)
T ss_dssp TTTSSEEEEEEEEEETT----TSSEEEEECEEEEEES--GSSTTTBEEEEEEE-E-ETTEEEEEEEESGSSTTTEEEEEE
T ss_pred CCCccceeEEeecccCc----cccccCcccccccccc--cccCCccccceEEE-E-cCCCEEEEEeccCCCCCceEEEee
Confidence 532 2334444433322 1334432211222211 11223345678864 4 4889999998654 2224677899
Q ss_pred eCCCCC-cEEc
Q 014220 217 SKDFVH-WIKA 226 (428)
Q Consensus 217 S~Dl~~-W~~~ 226 (428)
|+++.. |+..
T Consensus 212 s~~~~gp~~~~ 222 (286)
T PF04616_consen 212 SDSPLGPWEWK 222 (286)
T ss_dssp ESSTTSGGEET
T ss_pred ccCCCCceeec
Confidence 999876 4543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0017 Score=63.35 Aligned_cols=148 Identities=8% Similarity=0.058 Sum_probs=89.2
Q ss_pred CCCccCCcceEEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 014220 55 KNWINDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (428)
Q Consensus 55 ~gw~nDPng~~~~--~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~ 131 (428)
.+.+.-|. ++|. +|+|||||...... .+....++|+|++.. .|+.++..+.++ .....+++++++||+.
T Consensus 62 ~~~~waP~-v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~~~~-----~~~~Dp~vf~DdDG~~ 133 (265)
T cd08985 62 GRIIERPK-VIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFRPLG-----YQSRDFGLFVDDDGTA 133 (265)
T ss_pred CcEEECCe-EEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccCCCC-----CCccCCceEEcCCCCE
Confidence 33456664 5664 69999999987522 245689999999875 688765433211 2345688888888999
Q ss_pred EEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC-Ccc
Q 014220 132 AIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKG 210 (428)
Q Consensus 132 ~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~-~~G 210 (428)
+|+|.+.. .....++.-++. +..+ .+.+..... ......|.+ ++ .+|.|||+...... ...
T Consensus 134 Yl~~~~~~---~~~i~i~~L~~d----~~~~---~~~~~~~~~------~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~ 195 (265)
T cd08985 134 YLLYSDRD---NSDLYIYRLTDD----YLSV---TGEVTTVFV------GAGREAPAI-FK-RNGKYYLLTSGLTGWNPN 195 (265)
T ss_pred EEEEecCC---CCceEEEEeCCC----cccc---cceEEEccC------CCccccceE-EE-ECCEEEEEEccCCCccCC
Confidence 99998642 122344432221 2223 223332111 134578985 55 57999999876531 122
Q ss_pred EEEEEEeCCCC-CcEEccc
Q 014220 211 LAILYRSKDFV-HWIKAKH 228 (428)
Q Consensus 211 ~i~ly~S~Dl~-~W~~~~~ 228 (428)
.+..++|+++. .|+..+.
T Consensus 196 ~~~y~~s~s~~GP~~~~~~ 214 (265)
T cd08985 196 DARYATATSILGPWTDLGN 214 (265)
T ss_pred ceEEEEecCCCCCccccCc
Confidence 46678888765 5776553
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00032 Score=73.50 Aligned_cols=135 Identities=10% Similarity=0.065 Sum_probs=80.1
Q ss_pred CCcceEEECCEEEEEEeeCCCCCCCC-CcEEEEEEeCCCCCCccCC-CCCCCCCCccCCCeEeeeEEEcCCCceEEEEcc
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHD-PAIYPSQQSDINGCWSGSATILPGEKPAIFYTG 137 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~-~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 137 (428)
.++ ++..+|++||||..+.....+. ...-.+|+|+|+.+|+..+ ++|.+.......+.-.+.|+. .+|+++|++.+
T Consensus 88 sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~ 165 (445)
T TIGR01322 88 SGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGA 165 (445)
T ss_pred ECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEE
Confidence 443 3457999999999765322222 2335689999999999876 456543221112334566654 57999999877
Q ss_pred cCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCC-CCCCCCccCCeEEEECCCCeEEEEEeee
Q 014220 138 IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN-QINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (428)
Q Consensus 138 ~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~-~~~~~~~RDP~V~~~~~~g~y~Mv~ga~ 205 (428)
..........+..|.| |++|+.. .++..+...+ +.....|.=|-+ +. -+++|+|+++..
T Consensus 166 ~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 166 QTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS-LDGQDVLLFSPQ 225 (445)
T ss_pred ecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE-EE-ECCcEEEEEecc
Confidence 5433333445666655 5899975 3554322000 111123556764 44 478999999754
|
|
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0041 Score=58.95 Aligned_cols=188 Identities=14% Similarity=0.235 Sum_probs=104.4
Q ss_pred ccCCCCC--ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEE-cC
Q 014220 51 FQPPKNW--INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI-LP 127 (428)
Q Consensus 51 ~~p~~gw--~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~-~~ 127 (428)
..|+.|| +.||. +++++|+||+|....-.+.. |+...=..+-+|.+..-| +....+. +...+.++. .+
T Consensus 16 ~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~-----y~sm~f~~Ftdws~~~sA--~q~~m~~-~~vAP~vFYFaP 86 (271)
T PF03664_consen 16 AQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGG-----YGSMNFGPFTDWSQMASA--SQNYMDQ-SAVAPQVFYFAP 86 (271)
T ss_pred ccCCCCceeccCce-EEeECCEEEEEEEeccCCCc-----cceEeeeccCCHHHhhcc--ccccCCc-ccccceEEEecC
Confidence 4577788 58994 88999999999987644443 554444466788876543 2221221 222333332 25
Q ss_pred CCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC
Q 014220 128 GEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (428)
Q Consensus 128 dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~ 207 (428)
.+.++|.|.--.. .-...++.|.+++ ..|... .|++.... .+ .....-|..|+-. ..+ -||+.+..
T Consensus 87 k~~W~L~yQwg~~----~fsY~Ts~Dptnp--ngWSap--q~lf~g~i-~~-~~~g~iD~~vI~D-~~n-~yLFfa~D-- 152 (271)
T PF03664_consen 87 KNIWYLAYQWGPA----AFSYSTSSDPTNP--NGWSAP--QPLFSGSI-SG-SGTGPIDQWVICD-DTN-MYLFFAGD-- 152 (271)
T ss_pred CcEEEEEEecCCC----cceeecCCCCCCC--ccCCCC--cccccccc-cC-CCCCceeeEEEec-CCc-eEEEEcCC--
Confidence 7788888863211 1123355666665 568763 46653220 11 2244679998754 333 34444432
Q ss_pred CccEEEEEEeCC-CCCc----EEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCe
Q 014220 208 RKGLAILYRSKD-FVHW----IKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKH 277 (428)
Q Consensus 208 ~~G~i~ly~S~D-l~~W----~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~ 277 (428)
.| .||+|.- +-+. .-....+.+......+|.++++++. | +.+++|++.+.+..+
T Consensus 153 -nG--kiYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G-----------~~~YLmiVEaiGs~g 211 (271)
T PF03664_consen 153 -NG--KIYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--G-----------QNQYLMIVEAIGSDG 211 (271)
T ss_pred -CC--cEEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--C-----------CceEEEEEEEecCCC
Confidence 24 4888743 2222 1011122222345589999999997 4 247888877654333
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0021 Score=63.05 Aligned_cols=152 Identities=10% Similarity=0.175 Sum_probs=86.2
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-C-----CccCCCCCCCCCCccCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-N-----WIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~-----W~~~~~al~P~~~~D~~gv~SGsav~~~dg 129 (428)
+-+.-|. +++++|+|||||.....+. ....+|.|+|++.. - |+...+.+.+... +......+++++++||
T Consensus 55 ~~~WAP~-v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG 130 (279)
T cd08988 55 GHLWAPD-IYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHG 130 (279)
T ss_pred CCEecce-EEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCC
Confidence 3466774 7889999999998765432 24578999999864 3 4433343333221 1234567888888889
Q ss_pred ceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecC-CCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec--
Q 014220 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSP-KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-- 206 (428)
Q Consensus 130 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~-~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-- 206 (428)
+++|+|.... .+ ...+-++.|... ..... ...++..+ . +.....-|++ ++ .+|+|||++++..
T Consensus 131 ~~Yl~~g~~~-~g--i~~~eL~~d~~~-----~~~~~~~~~i~~~~--~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~ 196 (279)
T cd08988 131 QPWLSFGSFW-GG--IKLFELDKDTMK-----PAEPGELHSIAGRE--R--SSAAIEAPFI-LY-RGDYYYLFVSFGLCC 196 (279)
T ss_pred CEEEEecccC-CC--EEEEEECcccCC-----ccCCCcceEEeccC--C--CCCceEeeEE-EE-cCCeEEEEEEcCccc
Confidence 9999996532 11 122233333211 10000 01122221 1 1123567885 45 4799999886542
Q ss_pred ---CCccEEEEEEeCCCC-CcEE
Q 014220 207 ---NRKGLAILYRSKDFV-HWIK 225 (428)
Q Consensus 207 ---~~~G~i~ly~S~Dl~-~W~~ 225 (428)
+..-.+.+++|+++. -|+.
T Consensus 197 ~~~~~~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 197 RGGDSTYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CCCCCCeEEEEEEeCCCCCCCCC
Confidence 122368899999874 2443
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0053 Score=61.29 Aligned_cols=147 Identities=10% Similarity=0.093 Sum_probs=84.8
Q ss_pred ccCCcceEEEC----CEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccC-CC-CCCCCC-Ccc-CCCeEeeeEEEcCC
Q 014220 58 INDPNGVMIYK----GIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPH-DP-AIYPSQ-QSD-INGCWSGSATILPG 128 (428)
Q Consensus 58 ~nDPng~~~~~----G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~-~~-al~P~~-~~D-~~gv~SGsav~~~d 128 (428)
+.-|. +++.+ |+|+|||... ....+.|+|++.. .|+++ +. .+.+.. ..+ ......+++++++|
T Consensus 78 ~WAP~-v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdD 149 (311)
T cd09003 78 SWAPS-IAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDD 149 (311)
T ss_pred cCCCc-eEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCC
Confidence 44663 67787 9999999632 2358999999965 89975 32 222211 111 11245788888878
Q ss_pred CceEEEEcccCC----CCcceEEEEEEc-CCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEe
Q 014220 129 EKPAIFYTGIDP----HNRQVQNLAVPK-NLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (428)
Q Consensus 129 g~~~l~YTg~~~----~~~~~q~lA~S~-D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~g 203 (428)
|+.+|+|.+... ...+.+.+|.-+ |. .+ ..+.++.-.. + ..+.-|.+ ++ .+|+|||+++
T Consensus 150 G~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~--~----~~~Egp~~-~K-~~G~YYL~ys 213 (311)
T cd09003 150 GQGYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDA--P----YFFEASGL-HK-INGTYYYSYC 213 (311)
T ss_pred CCEEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccC--C----CceEeeeE-EE-ECCEEEEEEe
Confidence 999999975321 111233444322 21 22 2222332111 1 23567885 45 5899999987
Q ss_pred eec-------CCccEEEEEEeCCCC-CcEEccc
Q 014220 204 SKI-------NRKGLAILYRSKDFV-HWIKAKH 228 (428)
Q Consensus 204 a~~-------~~~G~i~ly~S~Dl~-~W~~~~~ 228 (428)
+.- .....+.+++|++.. .|+..+.
T Consensus 214 ~~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~ 246 (311)
T cd09003 214 TNFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGI 246 (311)
T ss_pred CCCCccCCCCCCceeEEEEEcCCCCCCcccCCE
Confidence 541 224467777887754 4876543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0028 Score=61.79 Aligned_cols=135 Identities=12% Similarity=0.029 Sum_probs=81.2
Q ss_pred CccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 014220 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (428)
Q Consensus 57 w~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (428)
-+.-|. +++.+|+|||||-.+. ...+.|+|++.. .|++.+... ....+++++++||+.+|+|
T Consensus 75 ~~WAP~-v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~ 137 (269)
T cd09001 75 GQWAPS-LRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVY 137 (269)
T ss_pred CEECCc-eEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEe
Confidence 356774 7889999999998751 135677887754 788765422 2245778887789999999
Q ss_pred cccCCCCcceEEEE-EEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEE
Q 014220 136 TGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAIL 214 (428)
Q Consensus 136 Tg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~l 214 (428)
.+. .+.++ ++.|. ..... ....++..+ .. ......-|+++ + .+|+|||++.+.......+.+
T Consensus 138 ~~~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~--~~-~~~~~Egp~i~-k-~~G~YYl~~S~~~~~~~~~~~ 200 (269)
T cd09001 138 GGG------TIRLVELSPDL-----TGVGG-KDQVIIDAG--EE-IGLGAEGSHLY-K-INGYYYIFNIAWGGGGRTQTC 200 (269)
T ss_pred CCC------cEEEEEECccc-----CCcCC-CceEEEeCC--Cc-cccccccCeEE-E-ECCEEEEEEecCCCCCceEEE
Confidence 653 23333 33332 22211 112233333 10 12345678854 5 589999999765322335678
Q ss_pred EEeCCCCC-cEE
Q 014220 215 YRSKDFVH-WIK 225 (428)
Q Consensus 215 y~S~Dl~~-W~~ 225 (428)
++|+++.. |+.
T Consensus 201 ~~s~~~~GP~~~ 212 (269)
T cd09001 201 LRSKSLTGPYES 212 (269)
T ss_pred EEeCCCCCCcCC
Confidence 89988654 543
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.004 Score=61.13 Aligned_cols=145 Identities=9% Similarity=0.034 Sum_probs=78.6
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCC----CCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKD----LINWIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~D----lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~ 131 (428)
+-+.-|. +++.+|+|||||...-.+ .......+.++|++ +-.|++.+..+.+.. .....++++.+ +|++
T Consensus 53 ~~~WAP~-i~~~~g~yylyys~~~~~-~~~~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~d-dG~~ 125 (288)
T cd08980 53 GNLWAPE-LHYIDGKWYIYFAAGDGG-GNANHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFEH-NGQL 125 (288)
T ss_pred ccEECce-EEEECCEEEEEEEccCCC-CCcceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEEE-CCEE
Confidence 3455663 678999999999765432 11234456666664 568998765442221 23456788775 7999
Q ss_pred EEEEcccCCC--CcceEEEEEEcCCCCCccceeEecCCCce-ecCCCCCCCCC---CCccCCeEEEECCCCeEEEEEeee
Q 014220 132 AIFYTGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPKNPL-MAPDAMNQINT---SSFRDPTTAWLGPDKRWRVIIGSK 205 (428)
Q Consensus 132 ~l~YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~nPv-i~~~~~~~~~~---~~~RDP~V~~~~~~g~y~Mv~ga~ 205 (428)
+|+|.+.... ....+.++...+. .++. +.++ +..+. ..++. ....-|+++.+ +|.|||++++.
T Consensus 126 Yl~~~~~~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~-~~we~~~~~~~EgP~~~k~--~G~yYl~yS~~ 194 (288)
T cd08980 126 YFVWSGWEGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPE-YDWERQGPGVNEGPAALKR--NGKVFLTYSAS 194 (288)
T ss_pred EEEEEccCCCCCCCccEEEEECCCC-----CccC---CcceEecCCC-CCceecCceeeECcEEEEE--CCEEEEEEECC
Confidence 9999865421 1223334433221 1222 2232 22221 11211 22457886544 69999999875
Q ss_pred cC-Cc-cEEEEEEeC
Q 014220 206 IN-RK-GLAILYRSK 218 (428)
Q Consensus 206 ~~-~~-G~i~ly~S~ 218 (428)
.- .. =++.+++|+
T Consensus 195 ~~~~~~Y~v~~a~~~ 209 (288)
T cd08980 195 GSWTPDYCLGLLTAD 209 (288)
T ss_pred CCCCCCCEEEEEEEc
Confidence 42 11 145566654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00064 Score=71.06 Aligned_cols=131 Identities=12% Similarity=0.115 Sum_probs=78.9
Q ss_pred eEEECCEEEEEEeeCC-CCC--CCCC-cEEEEEEeCCCCCCccC--CCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcc
Q 014220 64 VMIYKGIYHLFYQYNP-KGA--VWGN-IVWAHSTSKDLINWIPH--DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG 137 (428)
Q Consensus 64 ~~~~~G~YHlFYq~~p-~~~--~~g~-~~Wgha~S~Dlv~W~~~--~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg 137 (428)
++..+|++||||..+- ... .... ..-.+|+|+|+.+|+.. .++|.+...+.....-.+.|+..++|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 4456888999998763 211 1122 22367889999999987 3666553322222334566665434689999887
Q ss_pred cCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCC-----eEEEEEeee
Q 014220 138 IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK-----RWRVIIGSK 205 (428)
Q Consensus 138 ~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g-----~y~Mv~ga~ 205 (428)
...+..-.+.++.|+| |++|+.. .++..+. .+.....|.=|-++ . -++ +|+|+++..
T Consensus 154 ~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~--~~~~g~~wECPdlf-~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTD-----LKNWTLL--GELLHSG--VGDTGGMWECPDLF-P-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCC-----cccCeEC--CcccccC--CCCccceEECCcEE-E-eCCCCCceeEEEEECcC
Confidence 5544445567777776 5899875 3555331 01111346677643 3 344 899999775
|
|
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.01 Score=58.22 Aligned_cols=147 Identities=14% Similarity=0.011 Sum_probs=86.0
Q ss_pred CCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC-CCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 014220 54 PKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL-INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 54 ~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
..+-++-|. +++.+|+|||||...... +....+.++|+|. -.|++. . +.+. .+..++++.++||+.+
T Consensus 64 ~~~~~WAP~-v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~~-~-~~~~------~~iDp~vf~d~dG~~Y 131 (288)
T cd09000 64 DSGGIWAPT-IRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSDP-V-WLDS------GGIDPSLFFDDDGKVY 131 (288)
T ss_pred CCCceEcce-EEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcCC-E-ecCC------CccCCceeEcCCCCEE
Confidence 344466784 788999999999876532 2335667899988 378742 2 2222 3446888887789999
Q ss_pred EEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCc--eecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec
Q 014220 133 IFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNP--LMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (428)
Q Consensus 133 l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nP--vi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~ 206 (428)
|+|...... ....+.++..+. ..++-. +.| +.... ......-|.| ++ .+|+|||++.+..
T Consensus 132 ~~~~~~~~~~~~~~~~~i~~~~l~~------~~~~~~-~~~~~~~~~~-----~~~~~Egp~v-~k-~~g~YYl~ys~~~ 197 (288)
T cd09000 132 LVGNGWDERRGYNGHGGIWLQEIDL------ETGKLL-GEPKVIWNGT-----GGRWPEGPHL-YK-RDGWYYLLIAEGG 197 (288)
T ss_pred EEecccCCccccCCCCcEEEEEEcc------ccCCCC-CCcEEEEeCC-----CCCCcccCeE-EE-ECCEEEEEEecCC
Confidence 988654321 123344443221 112211 222 22111 1123467885 45 5899999986543
Q ss_pred C-CccEEEEEEeCCCC-CcEEc
Q 014220 207 N-RKGLAILYRSKDFV-HWIKA 226 (428)
Q Consensus 207 ~-~~G~i~ly~S~Dl~-~W~~~ 226 (428)
. ..-.+.+++|+++. .|+..
T Consensus 198 ~~~~~~v~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 198 TGYGHSVTVARSRSITGPYEPA 219 (288)
T ss_pred CCCCeEEEEEEeCCCCCCCccC
Confidence 2 22367899999877 57653
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.026 Score=56.78 Aligned_cols=166 Identities=16% Similarity=0.236 Sum_probs=98.2
Q ss_pred CCCCCccccccCC---CCCccCCcceEEEC-CEEEEEEeeCCCCC-------CCCCcEEEEEEeCCC-CCCccCCCCCCC
Q 014220 42 NQPYRTGYHFQPP---KNWINDPNGVMIYK-GIYHLFYQYNPKGA-------VWGNIVWAHSTSKDL-INWIPHDPAIYP 109 (428)
Q Consensus 42 ~~~~Rp~~H~~p~---~gw~nDPng~~~~~-G~YHlFYq~~p~~~-------~~g~~~Wgha~S~Dl-v~W~~~~~al~P 109 (428)
..+|.+.--+... ...+.||. ++... |+.+|||...+... .+...+..+..|+|- .+|... ..|.+
T Consensus 57 G~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~p-~~l~~ 134 (351)
T cd00260 57 GKTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSSP-RDLTP 134 (351)
T ss_pred CCcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecCC-ccCCc
Confidence 4577665333332 24577895 56666 99999998877542 123556778888887 799863 33333
Q ss_pred CCC-ccCCCeE--eeeEEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccC
Q 014220 110 SQQ-SDINGCW--SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRD 186 (428)
Q Consensus 110 ~~~-~D~~gv~--SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RD 186 (428)
... .+....+ .|+.+...+|++++.+.+....+.....+.+|+|++ ++|+... +.. . ......
T Consensus 135 ~~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~~-~-------~~~~~e 200 (351)
T cd00260 135 SVKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GVN-D-------AGGCSE 200 (351)
T ss_pred cccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CCC-C-------CCCCcC
Confidence 321 0111222 234555567888775544333334556677888875 7997632 111 1 022346
Q ss_pred CeEEEECCCCeEEEEEeeecCCccEEEEEEeCC-CCCcEEc
Q 014220 187 PTTAWLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (428)
Q Consensus 187 P~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (428)
|.|+-. .+|+.+|+..... .+.+.++.|.| ...|+..
T Consensus 201 ~~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 201 CSVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred CEEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccC
Confidence 776544 5788887765542 45667888866 5899864
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0044 Score=59.92 Aligned_cols=149 Identities=19% Similarity=0.296 Sum_probs=88.0
Q ss_pred CccCCcceEE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCC-CCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 014220 57 WINDPNGVMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (428)
Q Consensus 57 w~nDPng~~~-~~G~YHlFYq~~p~~~~~g~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~ 134 (428)
-..||. +++ .+|+.||||........+......+.+|+| ..+|.... .|.+.......+...+.++...+|++++-
T Consensus 47 ~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~ 124 (275)
T PF13088_consen 47 RYGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAP 124 (275)
T ss_dssp EEEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEE
T ss_pred cccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEE
Confidence 456785 444 499999999666555444445555599999 79999764 23222112223444555556678887664
Q ss_pred -EcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEE
Q 014220 135 -YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (428)
Q Consensus 135 -YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ 213 (428)
|... .......+.+|.|++ ++|+... ++. . ....--|.++.. .+|+.+|++-.. ..+.+.
T Consensus 125 ~~~~~--~~~~~~~~~~S~D~G----~tW~~~~--~~~--~------~~~~~e~~~~~~-~dG~l~~~~R~~--~~~~~~ 185 (275)
T PF13088_consen 125 YYHES--GGSFSAFVYYSDDGG----KTWSSGS--PIP--D------GQGECEPSIVEL-PDGRLLAVFRTE--GNDDIY 185 (275)
T ss_dssp EEEES--SCEEEEEEEEESSTT----SSEEEEE--ECE--C------SEEEEEEEEEEE-TTSEEEEEEEEC--SSTEEE
T ss_pred Eeecc--ccCcceEEEEeCCCC----ceeeccc--ccc--c------cCCcceeEEEEC-CCCcEEEEEEcc--CCCcEE
Confidence 4431 234556678899876 8998742 221 1 012234554433 678888777543 222677
Q ss_pred EEEeCC-CCCcEEc
Q 014220 214 LYRSKD-FVHWIKA 226 (428)
Q Consensus 214 ly~S~D-l~~W~~~ 226 (428)
+++|.| ..+|+..
T Consensus 186 ~~~S~D~G~TWs~~ 199 (275)
T PF13088_consen 186 ISRSTDGGRTWSPP 199 (275)
T ss_dssp EEEESSTTSS-EEE
T ss_pred EEEECCCCCcCCCc
Confidence 888866 8899863
|
... |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.023 Score=56.59 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=70.5
Q ss_pred EEEcCCCceEEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEE
Q 014220 123 ATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWR 199 (428)
Q Consensus 123 av~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~ 199 (428)
.++..+|+++|||--+... +...-++|+|+| |.+|+.. .++|.+. ...+....--..++.. ++.++
T Consensus 14 G~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--~~aL~P~--~~~d~~g~~SGs~~~~--~~~~~ 82 (308)
T PF00251_consen 14 GLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKD-----LVHWEHL--PVALPPD--EEYDADGCFSGSAVVD--DDNLV 82 (308)
T ss_dssp EEEEETTEEEEEEEEETTSSSS-SBEEEEEEESS-----SSSEEEE--EEEE-SS--SGGGTTEEEEEEEEEE--TTCEE
T ss_pred cCeEeCCEEEEEeccCCCCcccceeEEEEEECCC-----CCCceeC--CceEccc--ccCCcCccCcceEEEE--CCEEE
Confidence 3444699999999765421 345568999998 5899986 3666554 2222222333444433 34788
Q ss_pred EEEeeecC-CccEEEEEEe-CCCCCcEEcc--cccccC---CCCCeeecCceEEec
Q 014220 200 VIIGSKIN-RKGLAILYRS-KDFVHWIKAK--HPLHSV---KGTGMWECPDFFPVS 248 (428)
Q Consensus 200 Mv~ga~~~-~~G~i~ly~S-~Dl~~W~~~~--~~l~~~---~~~~~wECPdlf~l~ 248 (428)
|++.+... ..-...++.| +|..+|+... +|+... .....+.=|.+|...
T Consensus 83 ~~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 83 LFYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp EEEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred EEEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 88877653 2445567777 8999999854 455432 233467778876554
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.021 Score=56.63 Aligned_cols=138 Identities=12% Similarity=0.073 Sum_probs=74.5
Q ss_pred CCCCccCCcceEEE-CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCC----CCCCCcc----------CCCe
Q 014220 54 PKNWINDPNGVMIY-KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI----YPSQQSD----------INGC 118 (428)
Q Consensus 54 ~~gw~nDPng~~~~-~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al----~P~~~~D----------~~gv 118 (428)
...+.-||+ ++.+ ||+.+|+|-... + ...+..--+.|+..=...+..+ .|+.+|+ ..++
T Consensus 87 ~~~~~IDp~-vf~DdDGk~Yl~~g~~~----~-~~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~ 160 (295)
T cd08982 87 FPPGLADPA-LFIDDDGRLYLYYGCSN----N-YPLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPW 160 (295)
T ss_pred cCCCccCCc-eEECCCCCEEEEEecCC----C-CCeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCcc
Confidence 345677995 6665 599999984211 1 1123333344443211111111 1112222 1245
Q ss_pred EeeeEEEcCCCceEEEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCe
Q 014220 119 WSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (428)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~ 197 (428)
.-|..+...+|+++|+|++.... ..-.+.+|+|++.- ..|++...+||+..+ .+ .....-...+ +.+++|+
T Consensus 161 ~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~----GP~~~~~~~pil~~~--~~-~~~g~GH~s~-v~~~~G~ 232 (295)
T cd08982 161 MEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPL----GPFTYQPHNPFSYKP--GG-FITGAGHGST-FQDKYGN 232 (295)
T ss_pred ccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCC----CCCCcCCCCccccCC--CC-eEecCCcccE-EECCCCC
Confidence 66777777799999999865322 22346788887653 457766678888544 21 0011123333 4557889
Q ss_pred EEEEEeee
Q 014220 198 WRVIIGSK 205 (428)
Q Consensus 198 y~Mv~ga~ 205 (428)
|++++-+.
T Consensus 233 ~~~~yh~~ 240 (295)
T cd08982 233 YWHVGTMT 240 (295)
T ss_pred EEEEEEEE
Confidence 98887544
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.13 Score=50.54 Aligned_cols=144 Identities=13% Similarity=0.211 Sum_probs=79.1
Q ss_pred ccCCcceEEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC---CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 014220 58 INDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI---NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 58 ~nDPng~~~~--~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv---~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
..-|. ++|+ +++|+|+||+.+ ...+||+|.. .|....+.+.........+.-.-.+ +.+|++.|
T Consensus 78 fwAPq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~Y 146 (303)
T cd08987 78 RVAPQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCY 146 (303)
T ss_pred cccCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEE
Confidence 45775 6755 699999999632 5589999975 5887655443322112233344555 55689999
Q ss_pred EEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCC--eEEEEEeeecCCcc
Q 014220 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK--RWRVIIGSKINRKG 210 (428)
Q Consensus 133 l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g--~y~Mv~ga~~~~~G 210 (428)
||+.+-+. .+..|-... ..|.....+++.... ......-|.-|.| ++ .+| +|+|++-|...+.+
T Consensus 147 Lff~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~--~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~ 212 (303)
T cd08987 147 LFFSDDNG----KLYRSSTTL------GNFPNGGTETVIIMS--DSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGG 212 (303)
T ss_pred EEEecCCC----eEEEEecch------hhCCCCCCccEEEec--CCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCC
Confidence 99987542 333332211 122221122222111 0111245778885 55 344 99999977653222
Q ss_pred E-EEEEEeCCCC-CcEEc
Q 014220 211 L-AILYRSKDFV-HWIKA 226 (428)
Q Consensus 211 ~-i~ly~S~Dl~-~W~~~ 226 (428)
+ ..-++|+.|- .|+..
T Consensus 213 rYfrs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 213 RYFRSWTATSLDGPWTPL 230 (303)
T ss_pred CeEEEEEcCCCCCCceec
Confidence 1 1126666654 68764
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.16 Score=48.99 Aligned_cols=144 Identities=16% Similarity=0.094 Sum_probs=77.9
Q ss_pred CEEEEEEeeCCCCCCCCCcEEEEEEe--CCC-CCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCCC---C
Q 014220 69 GIYHLFYQYNPKGAVWGNIVWAHSTS--KDL-INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH---N 142 (428)
Q Consensus 69 G~YHlFYq~~p~~~~~g~~~Wgha~S--~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~ 142 (428)
|+...++.. +...+.......+| +|. .+|.....+..+. -....+..++++.+.+|+++|||+..... .
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 556666665 23334445555555 987 7899765444333 12245667777766799999999544321 1
Q ss_pred cceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEe-CCCC
Q 014220 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS-KDFV 221 (428)
Q Consensus 143 ~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S-~Dl~ 221 (428)
.......+|.|++ ++|.... .|.... ........+.+- +-. .+|++++..-........+.++.| +..+
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~--~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~ 145 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGW--FGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGK 145 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHC--CCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTS
T ss_pred ceeEEEEEECCCC----CCCCCcc--cccccc--ccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCc
Confidence 2222348899875 8999752 333221 111112234432 223 478777763222223344455555 5588
Q ss_pred CcEEcc
Q 014220 222 HWIKAK 227 (428)
Q Consensus 222 ~W~~~~ 227 (428)
.|+...
T Consensus 146 tW~~~~ 151 (275)
T PF13088_consen 146 TWSSGS 151 (275)
T ss_dssp SEEEEE
T ss_pred eeeccc
Confidence 998754
|
... |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.87 Score=48.35 Aligned_cols=151 Identities=12% Similarity=0.052 Sum_probs=81.1
Q ss_pred CCCCCccCCcceEEECCEEEEEEeeCCCCC-CCCCcEEEEEEeCC-CCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCc
Q 014220 53 PPKNWINDPNGVMIYKGIYHLFYQYNPKGA-VWGNIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPGEK 130 (428)
Q Consensus 53 p~~gw~nDPng~~~~~G~YHlFYq~~p~~~-~~g~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~ 130 (428)
|.+|=+.-|+ ++|+||+|+|+|...+... .+.+++--..+.++ .=.|.+. + ..+.. +.+..|.+.++||+
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~G~WsDp-i-~l~~~-----~~iDPslf~D~dGr 157 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESIDGPWSDP-I-KLNGS-----NAIDPSLFFDKDGR 157 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCcccccccEEEEecCCCCCcccc-e-ecCCc-----CccCCceeecCCCC
Confidence 5566677885 7899999999995544322 23333333344333 2367753 2 22221 24568888889999
Q ss_pred eEEEEcccCCCC--cceEEEEEEcCCCCCccceeEecCC--CceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec
Q 014220 131 PAIFYTGIDPHN--RQVQNLAVPKNLSDPYLREWVKSPK--NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (428)
Q Consensus 131 ~~l~YTg~~~~~--~~~q~lA~S~D~~d~~l~~w~k~~~--nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~ 206 (428)
.+|+|-+.+... ...-.+-.+.... .+ .+..+ -.++- .+.+.....-|. +++ ++|-|||+.+.+.
T Consensus 158 ~wlv~~~w~~~~~~~~~~~i~l~~~~~----~~-~~l~g~~~~~~~----~G~~~~~~EGPh-l~k-~~gYYYL~~a~gG 226 (549)
T COG3507 158 KWLVNGSWDGGIFMHSFAGIILQEYDK----TT-QKLVGQGYKIIF----DGGNGGLTEGPH-LYK-KTGYYYLYVAEGG 226 (549)
T ss_pred EEEEecccCCCcccccccceeeeeccc----cc-cccCCccceeEe----ccCCCccccCce-eec-cCCEEEEEEEcCC
Confidence 999999886421 1111111221110 00 11111 01111 111222345675 555 6888888886543
Q ss_pred -CCcc-EEEEEEeCCCCC
Q 014220 207 -NRKG-LAILYRSKDFVH 222 (428)
Q Consensus 207 -~~~G-~i~ly~S~Dl~~ 222 (428)
...| .+.++||+.+..
T Consensus 227 ~t~~gh~~~vaRSKsidG 244 (549)
T COG3507 227 LTTYGHAIRVARSKSIDG 244 (549)
T ss_pred CCccceeEEEEeccCCCC
Confidence 3333 578999987653
|
|
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=93.35 E-value=7.3 Score=38.97 Aligned_cols=148 Identities=14% Similarity=0.125 Sum_probs=81.8
Q ss_pred CcEEEEEEeCCC-CCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCCC----------CcceEEEEEEcCC
Q 014220 86 NIVWAHSTSKDL-INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH----------NRQVQNLAVPKNL 154 (428)
Q Consensus 86 ~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----------~~~~q~lA~S~D~ 154 (428)
.+....++|+|. .+|.... ++..... ....+..++.+.+.+|+++|||...... ......+..|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 466777888875 8999863 3433322 2356778888875448999999765421 2345667888886
Q ss_pred CCCccceeEecCCCceecCCCCCCCCCCCccCC--eEEEECCCCeEEEEEeeecCC--ccEEEEEEeCCCCCcEEccccc
Q 014220 155 SDPYLREWVKSPKNPLMAPDAMNQINTSSFRDP--TTAWLGPDKRWRVIIGSKINR--KGLAILYRSKDFVHWIKAKHPL 230 (428)
Q Consensus 155 ~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP--~V~~~~~~g~y~Mv~ga~~~~--~G~i~ly~S~Dl~~W~~~~~~l 230 (428)
+ .+|.+. ..+........+ ..-++-| -+. . ++|+++|.+-..... .-...+|..++.+.|+.. ...
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~-l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~-~~~ 192 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ-M-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLG-EGV 192 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEE-e-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEEC-CCC
Confidence 5 799763 122211100011 1112222 222 3 468887766544322 223345555667999863 322
Q ss_pred ccCCCCCeeecCceEEec
Q 014220 231 HSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 231 ~~~~~~~~wECPdlf~l~ 248 (428)
.. ...+.| |.++++.
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 11 123445 6788885
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=91.86 E-value=1 Score=45.11 Aligned_cols=148 Identities=16% Similarity=0.201 Sum_probs=70.3
Q ss_pred CCcceEEECCEEEEEE-eeCCCCCCCCCcEEEEEEeCCC-CCCccCCCCCCCC-CCccCCCeE--eeeEEEcCCCceEEE
Q 014220 60 DPNGVMIYKGIYHLFY-QYNPKGAVWGNIVWAHSTSKDL-INWIPHDPAIYPS-QQSDINGCW--SGSATILPGEKPAIF 134 (428)
Q Consensus 60 DPng~~~~~G~YHlFY-q~~p~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~-~~~D~~gv~--SGsav~~~dg~~~l~ 134 (428)
.|- .+..++..+|+- .|+... .......-++.|+|- +.|.+........ .... ... -||.|+.+||++++=
T Consensus 62 rPT-tvvkgn~IymLvG~y~~~~-~~~~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTLVFP 137 (310)
T PF13859_consen 62 RPT-TVVKGNKIYMLVGSYSRSA-GADDWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTLVFP 137 (310)
T ss_dssp EEE-EEEETTEEEEEEEEESS---SSTTEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-EEEE
T ss_pred eee-eeecceeEEEEEEEEeccc-cccccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCEEEE
Confidence 564 334566666665 444321 111222345566654 5798753211111 1111 111 156666779988776
Q ss_pred EcccCCCCc-ceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEE
Q 014220 135 YTGIDPHNR-QVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (428)
Q Consensus 135 YTg~~~~~~-~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ 213 (428)
-.+...... ....|.+|+|.+ .+|+=..+ + .....+||.|+-. ++|+-.|+.... .|.-.
T Consensus 138 v~a~~~~~~~~~SlIiYS~d~g----~~W~lskg---~--------s~~gC~~psv~EW-e~gkLlM~~~c~---~g~rr 198 (310)
T PF13859_consen 138 VQATKKNGDGTVSLIIYSTDDG----KTWKLSKG---M--------SPAGCSDPSVVEW-EDGKLLMMTACD---DGRRR 198 (310)
T ss_dssp EEEEETT---EEEEEEEESSTT----SS-EE-S---------------TT-EEEEEEEE--TTEEEEEEE-T---TS---
T ss_pred EeeeccCccceEEEEEEECCCc----cceEeccc---c--------CCCCcceEEEEec-cCCeeEEEEecc---cceEE
Confidence 666555444 366788998854 78985322 1 1234579998855 578877776432 24557
Q ss_pred EEEeCC-CCCcEEccccc
Q 014220 214 LYRSKD-FVHWIKAKHPL 230 (428)
Q Consensus 214 ly~S~D-l~~W~~~~~~l 230 (428)
+|+|.| ...|+..-..|
T Consensus 199 VYeS~DmG~tWtea~gtl 216 (310)
T PF13859_consen 199 VYESGDMGTTWTEALGTL 216 (310)
T ss_dssp EEEESSTTSS-EE-TTTT
T ss_pred EEEEcccceehhhccCcc
Confidence 999977 46799743333
|
|
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=87.29 E-value=9.8 Score=39.59 Aligned_cols=128 Identities=12% Similarity=0.132 Sum_probs=80.6
Q ss_pred CCEEEEEEeeCCCC-CCC-----CCcEEEEEEeCC----CCCCccCCCCCCCCCCccC-------CCeEeeeEEEc-CCC
Q 014220 68 KGIYHLFYQYNPKG-AVW-----GNIVWAHSTSKD----LINWIPHDPAIYPSQQSDI-------NGCWSGSATIL-PGE 129 (428)
Q Consensus 68 ~G~YHlFYq~~p~~-~~~-----g~~~Wgha~S~D----lv~W~~~~~al~P~~~~D~-------~gv~SGsav~~-~dg 129 (428)
+|+..|||.....+ ... -...-+++.+.| +..|+.+.+.+.+++.+-+ ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999984321 111 124556777777 5577777777788764321 34457888876 589
Q ss_pred ceEEEEcccCCC--------C------------------------cceEEEEEEcCCCCCccceeEecCCCceecCCCCC
Q 014220 130 KPAIFYTGIDPH--------N------------------------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN 177 (428)
Q Consensus 130 ~~~l~YTg~~~~--------~------------------------~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~ 177 (428)
+.||++.|+... + ...++||+..+.. +..|+-+ .|+|...
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~--- 294 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSAN--- 294 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEET---
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceecc---
Confidence 999999886421 0 1236788876643 3568876 4888654
Q ss_pred CCCCCCccCCeEEEECCCCeEEEEEeeec
Q 014220 178 QINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (428)
Q Consensus 178 ~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~ 206 (428)
. -.....=|.||++ +|+||++..++.
T Consensus 295 ~-v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 295 G-VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp T-TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred c-ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1 2344566887766 899999998886
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.15 E-value=13 Score=39.60 Aligned_cols=97 Identities=19% Similarity=0.180 Sum_probs=56.0
Q ss_pred cCCCceEEEEcccCC---CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEE
Q 014220 126 LPGEKPAIFYTGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (428)
Q Consensus 126 ~~dg~~~l~YTg~~~---~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ 202 (428)
..+|+|++||-=+.. .+...=+.|+|+| |.+|+..+ +++.|. ..++.....--.+|-. .++.+.|+-
T Consensus 49 y~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~p--iaL~Pd--~~~d~~g~ySGSAV~~-~~~l~lfyt 118 (486)
T COG1621 49 YFDGKYHLFYQYNPFGAAHGPKHWGHAVSKD-----LVHWEHLP--IALAPD--DDYDSHGCYSGSAVVD-DGNLSLFYT 118 (486)
T ss_pred EECCEEEEEEecCCCCCCCCCceeeeeccCC-----cccceECC--ceecCC--CccccCCceeeeEEEe-CCcEEEEEc
Confidence 358999999975532 1333446899977 69999752 455544 2222223333333323 466777776
Q ss_pred eeecC---Ccc-EEEEEEeCCCCCcEE-ccccccc
Q 014220 203 GSKIN---RKG-LAILYRSKDFVHWIK-AKHPLHS 232 (428)
Q Consensus 203 ga~~~---~~G-~i~ly~S~Dl~~W~~-~~~~l~~ 232 (428)
|.-.+ .+. .=.++.|+|..+++. .+.++..
T Consensus 119 g~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~ 153 (486)
T COG1621 119 GNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIID 153 (486)
T ss_pred cceeccCCcceeEEEEEEEcCCCceEeccCCceec
Confidence 65442 122 235778888888877 3555543
|
|
| >PF13810 DUF4185: Domain of unknown function (DUF4185) | Back alignment and domain information |
|---|
Probab=84.34 E-value=33 Score=34.41 Aligned_cols=155 Identities=14% Similarity=0.104 Sum_probs=85.1
Q ss_pred CccCCcceEEECCEEEEEEeeCCC-CC---CCCCcEEEEEEeCC-CCCCccCCCCCCCCCCccCCCe------EeeeEEE
Q 014220 57 WINDPNGVMIYKGIYHLFYQYNPK-GA---VWGNIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGC------WSGSATI 125 (428)
Q Consensus 57 w~nDPng~~~~~G~YHlFYq~~p~-~~---~~g~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv------~SGsav~ 125 (428)
.--=|.+.|-.+|+-+|.|+..-. ++ .|..-.=+.+.|+| ..+|+..+..+.+..+.- .|+ |.=++..
T Consensus 93 ~t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~~ 171 (316)
T PF13810_consen 93 TTVIPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAFV 171 (316)
T ss_pred eEEcccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccccccccc-CCcccccccccccccc
Confidence 344478888899999999986532 11 23322447889999 689999986555543110 111 2222333
Q ss_pred cCCCceEEEEcccCCCCcceEEEEEEcCCCCCccc--------e--eEecCC--CceecCCCCCCCCCCCccCCeEEEEC
Q 014220 126 LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLR--------E--WVKSPK--NPLMAPDAMNQINTSSFRDPTTAWLG 193 (428)
Q Consensus 126 ~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~--------~--w~k~~~--nPvi~~~~~~~~~~~~~RDP~V~~~~ 193 (428)
..||-+|+|=|...+. ....||...-..-.++. . |.+... .||+..+ +--..|.|.+
T Consensus 172 ~~dgyVYv~gt~~~R~--g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~---------vgElSv~~~~ 240 (316)
T PF13810_consen 172 KDDGYVYVYGTPFGRN--GGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP---------VGELSVRYNE 240 (316)
T ss_pred CCCCEEEEEeCCCCCC--CcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC---------ccceEEEEeC
Confidence 3466666666654432 22334432211000011 2 543211 2444322 2233566776
Q ss_pred CCCeEEEEEeeecCCccEEEEEEeCCCC-CcEE
Q 014220 194 PDKRWRVIIGSKINRKGLAILYRSKDFV-HWIK 225 (428)
Q Consensus 194 ~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~-~W~~ 225 (428)
..|+|+|+.... ..+.|.+.++++.. .|+.
T Consensus 241 ~~gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~ 271 (316)
T PF13810_consen 241 YLGKWVLSYFDA--GTGGIVLRTAPSPTGPWSE 271 (316)
T ss_pred CCCEEEEEEecc--cCCcEEEEecCCCCCCCCC
Confidence 789999998643 33568888888877 5874
|
|
| >COG3940 Predicted beta-xylosidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.05 E-value=7.5 Score=36.63 Aligned_cols=103 Identities=22% Similarity=0.374 Sum_probs=62.0
Q ss_pred eEEECC-EEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccC--CCCCC-CCCCccCCCeE--eeeEEEcCCCceEEEEcc
Q 014220 64 VMIYKG-IYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH--DPAIY-PSQQSDINGCW--SGSATILPGEKPAIFYTG 137 (428)
Q Consensus 64 ~~~~~G-~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~--~~al~-P~~~~D~~gv~--SGsav~~~dg~~~l~YTg 137 (428)
.++++| .|+++-|..|+-.. +.....|.-.+ -|+-. ++.|. |.-+|+..|.| .|.+|+..+|++.+-|++
T Consensus 137 tfeh~gk~yyvwaqkdp~i~g--nsniyiaemen--pwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysa 212 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIKG--NSNIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSA 212 (324)
T ss_pred eeeeCCEEEEEEeccCCCccC--CcceEEEeccC--CceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEec
Confidence 345666 57788888886543 44455554333 46654 34443 34466767776 488888789999999987
Q ss_pred cCCCCcceEEEEEE---cCCCCCccceeEecCCCceecC
Q 014220 138 IDPHNRQVQNLAVP---KNLSDPYLREWVKSPKNPLMAP 173 (428)
Q Consensus 138 ~~~~~~~~q~lA~S---~D~~d~~l~~w~k~~~nPvi~~ 173 (428)
...+-.-..++-.. +|.-|+ .+|+|. ..||+..
T Consensus 213 satd~nycmgllwanen~dlldp--aswtks-ptpvf~t 248 (324)
T COG3940 213 SATDVNYCMGLLWANENSDLLDP--ASWTKS-PTPVFKT 248 (324)
T ss_pred cccccceeeeeeeecccCCcCCc--hhcccC-CCcceee
Confidence 64332222333322 233233 589997 4788853
|
|
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.75 E-value=19 Score=38.19 Aligned_cols=91 Identities=22% Similarity=0.276 Sum_probs=54.9
Q ss_pred CCCceEEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEe
Q 014220 127 PGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (428)
Q Consensus 127 ~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~g 203 (428)
.+|.++|||.-+... +...=++|+|+| |++|+..+ |.|.|.+... ....|---.++ . .+|.=.|++.
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkD-----LinW~~lp--~Ai~Ps~~~d-ing~wSGSati-~-~~~~~vilyt 137 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKD-----LINWEALP--PAIAPSEWFD-INGCWSGSATI-D-PNNSPVILYT 137 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchh-----hccccccC--cccCCCCccc-cCccccceEEE-c-cCCCeEEEec
Confidence 589999999865432 334557899987 69999864 6665541111 12334444333 2 5777788876
Q ss_pred eecCCccEEEEEEe-CC-----CCCcEEcc
Q 014220 204 SKINRKGLAILYRS-KD-----FVHWIKAK 227 (428)
Q Consensus 204 a~~~~~G~i~ly~S-~D-----l~~W~~~~ 227 (428)
+-.....+|..|.- .| |+.|...+
T Consensus 138 g~d~~~rqVqn~a~p~d~sdp~l~~w~k~~ 167 (571)
T KOG0228|consen 138 GIDPNNRQVQNYAYPKDVSDPQLIAWSKDG 167 (571)
T ss_pred ccCcCceEEEEEeccCCCCchhhheeecCC
Confidence 65544556666653 23 45676543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 428 | ||||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 1e-163 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 1e-162 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 1e-162 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 1e-162 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 1e-162 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 1e-162 | ||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 1e-128 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 1e-127 | ||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 2e-91 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 3e-35 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 8e-35 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 5e-29 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 2e-24 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 8e-21 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 3e-19 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 3e-19 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 1e-18 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 2e-18 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 8e-10 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 9e-10 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 3e-09 |
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 428 | |||
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 0.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 0.0 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 0.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 1e-156 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 1e-144 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 1e-140 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 1e-137 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 1e-130 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 1e-127 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 6e-97 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 5e-09 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 1e-08 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 5e-08 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 1e-07 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 5e-07 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 6e-07 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 4e-05 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 7e-05 |
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 539 bits (1391), Expect = 0.0
Identities = 270/370 (72%), Positives = 307/370 (82%), Gaps = 4/370 (1%)
Query: 38 STSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL 97
S S NQPYRTG+HFQPPKNW+NDPNG MIYKGIYHLFYQ+NPKGAVWGNIVWAHSTS DL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 98 INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDP 157
INW PH PAI+PS DINGCWSGSATILP KP I YTGIDP N+QVQN+A PKNLSDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 158 YLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS 217
YLREW KSP NPLMAPDA+N IN SSFRDPTTAWLG DK+WRVIIGSKI+R+GLAI Y S
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 218 KDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPN---TKHVLKVSLDD 274
KDF+ W K+ PLH G+GMWECPDFFPV+ +G NG++TS G KHVLK+SLDD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 275 TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNE 334
TKH+YYT+GTY KD++VPD G + R+DYGKYYASKTFFD AKNRR+LWGW NE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 335 SSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQ-VPSKLLKGGSV 393
SSSV DDV+KGW+GIQ IPRK+WLD+SGK L+QWPV E+E+LR QV+ + +K+LK GS
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSR 360
Query: 394 IEVTGVTAAQ 403
+EV GVTAAQ
Sbjct: 361 LEVYGVTAAQ 370
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 531 bits (1369), Expect = 0.0
Identities = 209/365 (57%), Positives = 269/365 (73%), Gaps = 7/365 (1%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGN-IVWAHSTSKDLINW 100
QPYRTGYHFQPP NW+NDPNG M+Y+G+YH FYQYNP A +G+ I+W H+ S DL+NW
Sbjct: 4 EQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNW 63
Query: 101 IPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLR 160
I DPAIYP+Q++D CWSGSATILPG PA+ YTG D +RQVQ+LA PKNLSDP+LR
Sbjct: 64 IHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLR 123
Query: 161 EWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDF 220
EWVK PKNPL+ P + FRDP+TAWLGPD WR+++G + G+A LY+S DF
Sbjct: 124 EWVKHPKNPLITPP--EGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDF 181
Query: 221 VHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYY 280
V+W + PL S TG WECPDF+PV NGLDTS G + +HV+K + H++Y
Sbjct: 182 VNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEG--HDWY 239
Query: 281 TVGTYSTAKDRYVPDEGSVESDS--GLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSV 338
T+GTYS ++ ++P G + S LR+DYG++YASK+FFD AKNRRVLW WV E+ S
Sbjct: 240 TIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQ 299
Query: 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTG 398
DD++KGWAG+Q+ PR LW+D++GK L+QWPV EIE+LR NQV + +K LK GSV+E+ G
Sbjct: 300 ADDIEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHG 359
Query: 399 VTAAQ 403
+ A+Q
Sbjct: 360 IAASQ 364
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 525 bits (1353), Expect = 0.0
Identities = 161/367 (43%), Positives = 229/367 (62%), Gaps = 3/367 (0%)
Query: 38 STSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL 97
S + RT +HFQP ++W++DP+G + YKG YH FYQYNP VWGN W H+ S+DL
Sbjct: 11 SNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDL 70
Query: 98 INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDP 157
I+W+ A+ Q D+ G +SGSAT LP + + YTG+ ++ +LA P +LSDP
Sbjct: 71 IHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDP 130
Query: 158 YLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS 217
L EWVK P NP+++ ++ + FRD +T W + WR+ IG+K N G+A++Y +
Sbjct: 131 LLVEWVKYPGNPILSAPP--GVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYET 188
Query: 218 KDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKH 277
KDF + + LH+V TG+WEC D +PVST G GL+TS GP KHVLK S+D+ +
Sbjct: 189 KDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQR 248
Query: 278 EYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSS 337
+YY +GTY +++ PD + GLR+D+GKYYASKTF+D K RRV+W W E S
Sbjct: 249 DYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDS 308
Query: 338 VNDDVKKGWAGIQAIPRKLWLD-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEV 396
D +KGWA +Q IPR + LD K+G +++ WPV E+E LR++ + GSV+ +
Sbjct: 309 EVADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPL 368
Query: 397 TGVTAAQ 403
TA Q
Sbjct: 369 DVGTATQ 375
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 449 bits (1158), Expect = e-156
Identities = 99/397 (24%), Positives = 142/397 (35%), Gaps = 49/397 (12%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
+QPYR YHF P KNW+NDPNG++ + G YHLF+QYNP G WGNI W H+ S+DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 102 PHDPAIYPSQQSD--INGCWSGSATILPGEKPA----------IFYTGIDP--------- 140
A+ +SGSA YT P
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 141 ---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-APDAMNQINTSSFRDPTTAWLGPDK 196
++Q Q++A D L NP++ P + + +FRDP W +
Sbjct: 124 TVQEDQQSQSIAYS---LDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQ 180
Query: 197 RWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLD 256
+W V+ I +Y S + W G+WECP +
Sbjct: 181 KWVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS----- 233
Query: 257 TSDMGPNTKHVLKVSLDD-------TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDY 309
G +TK V+ L+ Y VG + D + + D+
Sbjct: 234 ----GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDW 289
Query: 310 GK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK--HLV 366
G +YA+ + + N V GW+N + W AIPR + L G LV
Sbjct: 290 GPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLV 349
Query: 367 QWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQ 403
Q P + + T T
Sbjct: 350 QQPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGET 386
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 420 bits (1082), Expect = e-144
Identities = 101/389 (25%), Positives = 156/389 (40%), Gaps = 37/389 (9%)
Query: 31 RNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWA 90
+ N + YH WINDPNG+ YKG +H+FYQ +P G WG + W
Sbjct: 25 EAGVAEMAAKRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWG 84
Query: 91 HSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHN-------- 142
H +S D++NW PS + + +G +SGSA I +YTG N
Sbjct: 85 HVSSTDMLNWKREPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGD 144
Query: 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202
QVQ A+P N + + ++ +RDP W +
Sbjct: 145 WQVQMTALPDN-----DELTSATKQGMIIDCPT--DKVDHHYRDPKVWK--TGDTWYMTF 195
Query: 203 GSK-INRKGLAILYRSKDFVHWIKAKHPL-HSVKGTGMWECPDFFPVSTYGLNG---LDT 257
G +++G L+ SKD V W + H M ECPDF P+ N +
Sbjct: 196 GVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGF 255
Query: 258 SDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASK 316
S MG + ++ + Y +GT+ + P+ +D G YYA +
Sbjct: 256 SAMGSKPSGFMNRNVSNA---GYMIGTWEP-GGEFKPE------TEFRLWDCGHNYYAPQ 305
Query: 317 TFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKL 376
+F R++++GW++ GW G +PR++ L G +V PV E+E L
Sbjct: 306 SFNV--DGRQIVYGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDGD-VVTAPVAEMEGL 362
Query: 377 RVNQVQVPSKLLK-GGSVIEVTGVTAAQV 404
R + + S L G I A ++
Sbjct: 363 REDTLDHGSVTLDMDGEQIIADDAEAVEI 391
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 410 bits (1055), Expect = e-140
Identities = 86/416 (20%), Positives = 160/416 (38%), Gaps = 57/416 (13%)
Query: 20 VVELQASHHVY--RNLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQY 77
++ + ++ V+ T S + + YR YHF P + W+N+PNG++ +HLF+Q+
Sbjct: 1 MLNPKVAYMVWMTCLGLTLPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQH 60
Query: 78 NPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA----- 132
NP VWGNI W H+TS DL++W AI + ++G+A P
Sbjct: 61 NPTANVWGNICWGHATSTDLMHWAHKPTAIADENGVE---AFTGTAYYDPNNTSGLGDSA 117
Query: 133 -----IFYTG-IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDA---MNQINTSS 183
++TG Q Q LA + W K NP+++ +
Sbjct: 118 NPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLE 173
Query: 184 FRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHW-----IKAKHPLHSVKGTGM 238
RDP + W +++ + + S D ++W +K+
Sbjct: 174 SRDPKVFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITG 231
Query: 239 WECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL-----DDTKHEYYTVGTYSTAKDRYV 293
WE PD F + G T V+ ++ G++
Sbjct: 232 WEVPDMFELPVEGTEE---------TTWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTAD 282
Query: 294 PDEGSVESDSGLRFDYGK-YYASKTFFD--GAKNRRVLWGWVNESSSVNDDVKKGWAGIQ 350
P + S + D G+ + + ++ + + RR++ +N S W G+
Sbjct: 283 PVDAST-----MWLDNGRDFDGALSWVNVPASDGRRIIAAVMNSYGSNPPT--TTWKGML 335
Query: 351 AIPRKLWLDKSGK--HLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQV 404
+ PR L L K G H VQ P+ E++ + + + ++ + G + ++ + +
Sbjct: 336 SFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTAL 390
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 398 bits (1024), Expect = e-137
Identities = 102/366 (27%), Positives = 175/366 (47%), Gaps = 52/366 (14%)
Query: 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD 104
++ YHF P W+NDPNG++ +KG YH+FYQYNP+ WGNI W H+ S DL++W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 105 PAIYPSQQSDINGCWSGSATILPGEKPAIFYTGI-----DPHNRQVQNLAVPKNLSDPYL 159
A+YP + +G +SGSA + K + YT + ++ Q + + +N
Sbjct: 62 VALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN-----G 113
Query: 160 REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLAILYRSK 218
++VK NP+++ + T +FRDP + WR+++GS + G +LY S
Sbjct: 114 LDFVKYDGNPVISKPP--EEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSD 169
Query: 219 DFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHE 278
D HW K + + + T +CPD + K +L S+ T
Sbjct: 170 DLFHW-KYEGAIFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSV 213
Query: 279 YYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNE--S 335
+++G EG + + D+G +YA++TFF +R V+ GW+
Sbjct: 214 LFSMGEL---------KEGKLNVEKRGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLR 262
Query: 336 SSVNDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIE 395
+ + ++GW G+ ++PR+L+++ L PV E+ LR +V +K G +++
Sbjct: 263 TGLYPTKREGWNGVMSLPRELYVE--NNELKVKPVDELLALRKRKVFETAK--SGTFLLD 318
Query: 396 VTGVTA 401
V +
Sbjct: 319 VKENSY 324
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 384 bits (988), Expect = e-130
Identities = 86/388 (22%), Positives = 155/388 (39%), Gaps = 60/388 (15%)
Query: 38 STSPNQPYRTGYHFQPPKNWINDPNGVMIYK--GIYHLFYQYNPKGAVWGN-IVWAHSTS 94
S ++ R HF P K W+NDPNG+ K ++HL++QYNP WG + W H+TS
Sbjct: 2 SVDTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 61
Query: 95 KDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHN------------ 142
DL++W H+ AI P D G +SGS + F + IDP+
Sbjct: 62 NDLVHWDEHEIAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPD 119
Query: 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202
Q Q++A + + K NP++ ++++ FRDP W +W +++
Sbjct: 120 NQTQDIAFSLDGG----YTFTKYENNPVI------DVSSNQFRDPKVFWHEDSNQWIMVV 169
Query: 203 GSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGP 262
++ ++ S + +W+ + G +ECP V +
Sbjct: 170 SKS--QEYKIQIFGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVPIENSDK-------- 218
Query: 263 NTKHVLKVSL-----DDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASK 316
+K V+ +++ Y VG + ++VPD+ D GK +YA +
Sbjct: 219 -SKWVMFLAINPGSPLGGSINQYFVGDFD--GFQFVPDDSQ-----TRFVDIGKDFYAFQ 270
Query: 317 TFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWL-------DKSGKHLVQWP 369
TF + ++ + W + + W ++ R L + L+Q P
Sbjct: 271 TFSE-VEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNP 329
Query: 370 VVEIEKLRVNQVQVPSKLLKGGSVIEVT 397
V+ V++++ + L I+
Sbjct: 330 VLPDSINVVDKLKKKNVKLTNKKPIKTN 357
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 375 bits (966), Expect = e-127
Identities = 77/379 (20%), Positives = 127/379 (33%), Gaps = 52/379 (13%)
Query: 49 YHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY 108
YH PP W+ +P + G Y L+Y ++ + G W H+++ D + + H +
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQN--NGPGGWDHASTTDGVAFTHHGTVMP 61
Query: 109 PSQQSDINGCWSGSATILPGEKPAIFYTGI----------DPHNRQVQNLAVPKNLSDPY 158
WSGSA + A F G Q Q L +
Sbjct: 62 LRPDFP---VWSGSAVVDTA-NTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDG---- 113
Query: 159 LREWVKSPKNPLMAPDAM------NQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLA 212
+ P ++ D N FRDP W W +IG A
Sbjct: 114 GFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGR----LRYA 169
Query: 213 ILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272
Y S + W ++ + G ECPD F + + VL S+
Sbjct: 170 AFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEI----------TADDGTRHWVLAASM 219
Query: 273 DDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTF--FDGAKNRRVLW 329
D Y T + ++ + + D+G +YA+ T+ D + +R+
Sbjct: 220 DAYGIGLPMTYAYWT--GTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAI 277
Query: 330 GWVNESSSVNDDV----KKGWAGIQAIPRKLWLDK---SGKHLVQWPVVEIEKLRVNQVQ 382
W+N DV G+ G +I R+L L + L+ PV +
Sbjct: 278 AWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTT 337
Query: 383 VPSKLLKGGSVIEVTGVTA 401
+P + + G +V+ G
Sbjct: 338 LPDRTVDGSAVLPWNGRAY 356
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 302 bits (774), Expect = 6e-97
Identities = 67/474 (14%), Positives = 135/474 (28%), Gaps = 111/474 (23%)
Query: 32 NLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVM--IYKGIYHLFYQYNPKGAVWGNIVW 89
NL T + + +R H P + I DP G++H+ + ++ G
Sbjct: 13 NLSTLPNNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG-------I 65
Query: 90 AHSTSKDLINWIPHD----PAIYPSQQSDINGCWSGSAT-ILPGEKPAIFYTGI------ 138
A +T+ +L + I P ++D + G+ + P + YT +
Sbjct: 66 AGATTANLATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIH 125
Query: 139 ----DPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDP------- 187
+ Q+LAV + R + K + P++ D ++ ++FR P
Sbjct: 126 WSIPYTRGSETQSLAV----ARDGGRRFDKLDQGPVI-ADHPFAVDVTAFRAPFVFRSAR 180
Query: 188 ---------------------TTAWLGPDKRWRVIIGSKINRKGLAIL------YRSKDF 220
W + W V + ++ G A + +F
Sbjct: 181 LDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEF 240
Query: 221 VHWIKAKHPLHSVKGTG-------------MWECPDFFPVSTYGLNGLDTSD---MGPNT 264
+W + +E + ++ G + +G
Sbjct: 241 QYWEYLGEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEG 300
Query: 265 KHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGA- 322
+ V + H+ + D+G YA+ A
Sbjct: 301 SGLPIVPQVSSIHDMLWAAGEVGVGSEQEGAKVEFSPSMAGFLDWGFSAYAAAGKVLPAS 360
Query: 323 ----------KNRRVLWGWVNESSSVNDD----VKKGWAGIQAIPRKLWL---------D 359
+R V + W+ D ++GW G +PR+L + +
Sbjct: 361 SAVSKTSGVEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNE 420
Query: 360 KSGKHLVQWPVVE-------IEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQVSS 406
+ V W V E + L + + L + Q ++
Sbjct: 421 LVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTAA 474
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 56.8 bits (136), Expect = 5e-09
Identities = 34/217 (15%), Positives = 63/217 (29%), Gaps = 24/217 (11%)
Query: 57 WINDPNGVMIYKGIYHLFYQYNP-------------KGAVWGNIVWAHSTSKDLINWIPH 103
DP+ ++ G Y+++Y + K W ++TS+D W
Sbjct: 94 VRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDGWTWKEE 153
Query: 104 DPAIYPSQQS--DINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
PA+ ++ D ++ K + Y + V +D
Sbjct: 154 GPAVTRGEKGAYDDRSVFTVEIMKWED-KYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP 212
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
W KS + P+++P G +V I KG LY + +
Sbjct: 213 WTKSEE-PILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIPYKGKFYLYYKGEQM 271
Query: 222 HWIKAKHPLH-------SVKGTGMWECPDFFPVSTYG 251
+ G + + P+S G
Sbjct: 272 GEAITFGGRQIRHGVAIADNPKGPYVKSPYNPISNSG 308
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 1e-08
Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 27/188 (14%)
Query: 63 GVMIYKGIYHLFY---QYNPKGAVWGNIVWAHSTSKDLINW-IPHDPAIYPSQQSDINGC 118
+Y G + Y + G ++TS D ++ P YP S
Sbjct: 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELE 116
Query: 119 WSGSA-----TILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAP 173
W G + + YT + H ++ +A +N L++W K A
Sbjct: 117 WPGGCEDPRIAVTDDGLYVMMYTQWNRHVPRLA-VATSRN-----LKDWTKHGPAFAKAF 170
Query: 174 DAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI-------LYRSKDFVHWIKA 226
D + + + + K+N K S D +HW
Sbjct: 171 D-----GKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFMYWGEEHVFAATSDDLIHWTPI 225
Query: 227 KHPLHSVK 234
+ S+K
Sbjct: 226 VNIDGSLK 233
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 5e-08
Identities = 35/200 (17%), Positives = 59/200 (29%), Gaps = 26/200 (13%)
Query: 43 QPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQY-------------NPKGAVWGNIVW 89
P + ++ DP+ V+ YH++Y K W
Sbjct: 36 TPLKGDLAYEEGVIR-RDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEV 94
Query: 90 AHSTSKDLINWIPHDPAIYPSQQS--DINGCWSGSATILPGEKPAIFYTGIDP----HNR 143
H+TSKD I W PAI D ++ G + Y + +
Sbjct: 95 WHATSKDKITWKEIGPAIQRGAAGAYDDRAVFTPEVLRHNG-TYYLVYQTVKAPYLNRSL 153
Query: 144 QVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203
+ +A SD W KS P+++P+ +T G +V
Sbjct: 154 EHIAIAY----SDSPFGPWTKSDA-PILSPENDGVWDTDEDNRFLVKEKGSFDSHKVHDP 208
Query: 204 SKINRKGLAILYRSKDFVHW 223
+ LY + +
Sbjct: 209 CLMFFNNRFYLYYKGETMGE 228
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 1e-07
Identities = 24/180 (13%), Positives = 49/180 (27%), Gaps = 25/180 (13%)
Query: 57 WINDPNGVMIYKGIYHLFYQY-------------NPKGAVWGNIVWAHSTSKDLINWIPH 103
DP+ ++ Y+++Y K W ++TSKD + W
Sbjct: 89 VRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGLTWKEQ 148
Query: 104 DPAIYPSQQS--DINGCWSGSATILPGEKPAIFYTGID----PHNRQVQNLAVPKNLSDP 157
A+ ++ D ++ G K + Y + + +A +
Sbjct: 149 GIAVKRGEKGAYDDRSVFTPEVMEWKG-KYYLCYQAVKSPYTVRVKNTIGMACADSPEGL 207
Query: 158 YLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS 217
+ P++ P + G +V I G +Y
Sbjct: 208 W-----TKTDKPVLEPSDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCIIPYNGKFYMYYK 262
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 50.7 bits (120), Expect = 5e-07
Identities = 30/200 (15%), Positives = 51/200 (25%), Gaps = 31/200 (15%)
Query: 34 QTSQSTSPNQPYRTGYHFQPPKNWIND--------PNGVMIYKGIYHLFYQYNPKGAVW- 84
+ P + I D V + G +
Sbjct: 103 ASKIKNMPAAKTLDAQSGKVEDLEIWDSWPVQDAKTGYVSNWNGYQLVIGMMGVPNVNDN 162
Query: 85 -GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDP--H 141
+++ D +W P + + WSGSAT+ ++YT +D +
Sbjct: 163 HIYLLYNKYGDNDFNHWKNAGPIFGLG--TPVIQQWSGSATLNKDGSIQLYYTKVDTSDN 220
Query: 142 NRQVQNLAVPK---NLSDPYLREWVKSPKN--PLMAPD------------AMNQINTSSF 184
N Q LA NL + + N + D + +
Sbjct: 221 NTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIAM 280
Query: 185 RDPTTAWLGPDKRWRVIIGS 204
RD R+ V S
Sbjct: 281 RDAHVIDDDNGNRYLVFEAS 300
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 6e-07
Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 28/185 (15%)
Query: 55 KNWINDPNGVMIYKGIYHLFY---QYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYPS 110
++ +P IY G + Y + +G ++TS D I++ PA YP+
Sbjct: 47 ESDTFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPA 105
Query: 111 QQSDINGCWSGSA-----TILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKS 165
+ + G + + YT + ++ +A K+ L+ W K
Sbjct: 106 KDNQAENECPGGTEDPRIAMTEDGTYVLLYTQWNRKVPRLA-VATSKD-----LKHWTKF 159
Query: 166 PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI-------LYRSK 218
P + + + A L + + +K+N K S
Sbjct: 160 G--PAFEKAYNGKFKDEATKS---ASLVTTLKGDKQVIAKVNGKYFMYWGEKNVYAATSD 214
Query: 219 DFVHW 223
+ + W
Sbjct: 215 NLIDW 219
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 4e-05
Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 9/132 (6%)
Query: 71 YHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEK 130
++FYQ + ++ KD + +D + Q WSGSAT K
Sbjct: 95 IYMFYQKVGETSIDSWKNAGR-VFKDSDKFDANDSILKDQTQ-----EWSGSATFTSDGK 148
Query: 131 PAIFYTGIDPHNRQVQNLAVPK-NLSDPYLREWVKSPKNP--LMAPDAMNQINTSSFRDP 187
+FYT + Q L + N+S + ++ + D N F D
Sbjct: 149 IRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDE 208
Query: 188 TTAWLGPDKRWR 199
G + R
Sbjct: 209 GNYSSGDNHTLR 220
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 43.5 bits (102), Expect = 7e-05
Identities = 19/193 (9%), Positives = 52/193 (26%), Gaps = 21/193 (10%)
Query: 102 PHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE 161
+P I + ++ + + + + + R + K+
Sbjct: 40 SKNPIIGRNPVPKGARVFNSAV-VPYNGEFVGVFRIDHKNTRPFLHFGRSKDG-----IN 93
Query: 162 WVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFV 221
W P+ S DP + + + + + + + + +KDF
Sbjct: 94 WEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDDHGPTIG-VGMTKDFK 150
Query: 222 HWIKAKHPLHSVKGTG------------MWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269
+++ + G M P + +G L S + +
Sbjct: 151 TFVRLPNAYVPFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIFLSESPDMIHWGNHRF 210
Query: 270 VSLDDTKHEYYTV 282
V + + + +
Sbjct: 211 VLGRSSYNWWENL 223
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 428 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 100.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 100.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 100.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 100.0 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 100.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 100.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 100.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 100.0 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 100.0 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 100.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 99.98 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 99.97 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.93 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.93 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 99.92 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.92 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.91 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 99.89 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.88 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 99.86 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 99.82 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.82 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 99.82 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 99.81 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 99.81 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 99.78 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 99.68 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.66 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.66 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 99.62 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 99.6 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 99.6 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 99.59 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.59 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.56 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.5 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.44 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.42 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 99.35 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 99.3 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 99.06 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 99.06 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 99.01 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 98.97 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 98.55 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 98.48 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 98.39 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 98.22 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 98.17 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 98.17 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 98.11 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.03 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 98.01 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.01 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 97.98 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 97.95 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 97.92 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 97.87 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 97.74 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 97.68 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 97.62 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 97.61 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.55 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 97.54 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 97.43 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 97.42 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 97.38 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 97.35 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 97.18 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 97.0 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 96.84 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 96.72 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.59 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 96.55 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 96.39 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 96.23 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 95.95 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 95.69 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 95.47 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 95.02 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 94.65 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 94.48 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 92.62 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 92.13 | |
| 2w20_A | 471 | Sialidase A; secreted, cell WALL, hydrolase, glyco | 91.98 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 91.8 | |
| 2sli_A | 679 | Intramolecular trans-sialidase; hydrolase, neurami | 90.48 | |
| 3sil_A | 379 | Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1 | 89.88 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 88.76 | |
| 2jkb_A | 686 | Sialidase B; intramolecular trans-sialidase, lyase | 87.68 | |
| 1ms9_A | 648 | Trans-sialidase; trans-glycosylation, protein-acrb | 86.52 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 86.51 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 84.16 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 83.44 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 83.03 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-94 Score=752.39 Aligned_cols=366 Identities=43% Similarity=0.855 Sum_probs=330.2
Q ss_pred CCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeee
Q 014220 43 QPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGS 122 (428)
Q Consensus 43 ~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGs 122 (428)
+.+||+|||+|+.||||||||++|++|+||||||++|.++.||+++||||+|+||+||+++|+||.|+..+|+.||||||
T Consensus 16 ~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DLvhW~~~p~AL~P~~~~D~~G~~SGS 95 (546)
T 3ugf_A 16 SWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPLALAADQWYDMQGVFSGS 95 (546)
T ss_dssp HHTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSSSSCEECCCCBCSCSGGGTTCEEEEE
T ss_pred hhcCCeEEEeCCCCCccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCcCccccCCCCCCCCcccccCCcCcce
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEE
Q 014220 123 ATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (428)
Q Consensus 123 av~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ 202 (428)
|++++||+++|||||+.....|.|++|+|.|++|+.|++|+|+++||||.+| +++...+||||+|+|++++|+|+|++
T Consensus 96 avv~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p--~g~~~~~fRDPkVvw~~~~g~w~Mvi 173 (546)
T 3ugf_A 96 ATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAP--PGVSPTEFRDASTGWYVSNGTWRIAI 173 (546)
T ss_dssp EEECTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCC--TTSCTTSCCCBCCCEECSTTCEEEEE
T ss_pred EEEeeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCC--CCCCcceeeccceEeECCCCEEEEEE
Confidence 9877799999999999866789999999999989989999999889999877 67667899999988987889999999
Q ss_pred eeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCeeeEEE
Q 014220 203 GSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTV 282 (428)
Q Consensus 203 ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~Y~v 282 (428)
|++.+..|+|++|+|+||++|++.+.++......+||||||||+|+..+.+++++|+++.+.||||+.|.+....++|++
T Consensus 174 Ga~~~~~G~vllY~S~DL~~W~~~~~~~~~~~~~gmwECPDlf~l~~~~~~gl~~s~~g~~~k~Vl~~s~~~~~~~~Y~i 253 (546)
T 3ugf_A 174 GAKYNTTGIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAI 253 (546)
T ss_dssp EEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCEEEEEEEEEESSCSSCCCTTCCSTTEEEEEEEEETTTTEEEEEE
T ss_pred EEccCCcceEEEEECCCCCCceEcccccccCCCCCeEECCeEEEECCcCccceeecccCCceeEEEEecccCCCceEEEE
Confidence 99987789999999999999999887655433456999999999997777789999998889999999998777899999
Q ss_pred EEeeCCCCcccCCCCCccCCCccccccCCCcccceEeeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccEEEEEec-C
Q 014220 283 GTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-S 361 (428)
Q Consensus 283 G~~d~~~~~f~p~~~~~~~~~~~~lD~G~fYA~qtf~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~-d 361 (428)
|+||+.+.+|+|+....|...+.++|+|.|||+|||.|+.+|||||||||++++...++.+.||+|+|||||||+|++ +
T Consensus 254 G~~d~~~~~f~~~~~~~d~g~~~~lD~GdfYA~qtf~d~~~gRril~gWm~~~d~~~~~~~~gW~g~ltlPRel~l~~~~ 333 (546)
T 3ugf_A 254 GTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPRTVLLDQKT 333 (546)
T ss_dssp EEEETTTTEEEESCGGGCTTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEECTTT
T ss_pred eeecCCCCeeecCCcccccCccccccCCCccCcceeecCCCCCEEEEEeCCCCCcCCCCcccCccCcceeCEEEEEEeCC
Confidence 999998889998765444444578999999999999997679999999999998866666789999999999999984 4
Q ss_pred CCeEEecchHHHHHhhhcceeccceEeeCCcEEEEcCccceEEEEEEEe
Q 014220 362 GKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQVSSCLYA 410 (428)
Q Consensus 362 G~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (428)
|.+|+|+||+||++||.+.+.+.+..+.+++.+++.+..+.|+||++++
T Consensus 334 g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~q~di~~~f 382 (546)
T 3ugf_A 334 GTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEF 382 (546)
T ss_dssp SSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCCSCCSEEEEEEEE
T ss_pred CCEEEEEehHHHHHHhcCcceecceEecCCCeEEecCCCccEEEEEEEE
Confidence 5579999999999999999888888998889888988888899888765
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-89 Score=726.46 Aligned_cols=371 Identities=73% Similarity=1.292 Sum_probs=326.4
Q ss_pred CCCCCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeE
Q 014220 40 SPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCW 119 (428)
Q Consensus 40 ~~~~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~ 119 (428)
..+++|||+|||+|+.||||||||++|++|+||||||++|.++.||+++||||+|+||+||+++++||.|+..+|..|||
T Consensus 3 ~~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~G~~ 82 (541)
T 2ac1_A 3 SVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCW 82 (541)
T ss_dssp --CCTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSBEEEEEEECCCSGGGTTCEE
T ss_pred CcCcccccceeecCccCCeeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCccceEECceeecCCCccccCCEE
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEE
Q 014220 120 SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWR 199 (428)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~ 199 (428)
||||+++++|+++|||||++....|.|++|+|.|++|++|.+|+|++.||||.++.++++...+||||+|+|++++|+|+
T Consensus 83 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~w~ 162 (541)
T 2ac1_A 83 SGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWR 162 (541)
T ss_dssp EEEEEECTTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEECTTSCEE
T ss_pred cceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeEeCCCeEE
Confidence 99998867999999999975556899999999999888899999998899996542234556899999987986689999
Q ss_pred EEEeeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCC---ceeEEEEeeCCCC
Q 014220 200 VIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPN---TKHVLKVSLDDTK 276 (428)
Q Consensus 200 Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~---~~~vl~~s~~~~~ 276 (428)
|++|++.+..|++++|+|+||++|++.+.++.....++||||||||+|+.+|.+++.+|+++.+ .+|||+.|.++..
T Consensus 163 m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~~~~vl~~s~~~~~ 242 (541)
T 2ac1_A 163 VIIGSKIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTK 242 (541)
T ss_dssp EEEEEEETTEEEEEEEEESSSSSCEECSSCSEEEETSCCEEEEEEEEEESSCSCCCCTTCCCBTTBCEEEEEEEEETTTT
T ss_pred EEEEEecCCceEEEEEECCCCCCcEEcccccccCCCCCcccCCcEEEECCCCcceeEecCCCCCcccceeEEEeeecCCc
Confidence 9999988778999999999999999987776654456899999999999877788999988765 6999999988788
Q ss_pred eeeEEEEEeeCCCCcccCCCCCccCCCccccccCCCcccceEeeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccEEE
Q 014220 277 HEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKL 356 (428)
Q Consensus 277 ~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~fYA~qtf~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l 356 (428)
.++|++|+||.++.+|+|+..+.+....++||+|.|||+|||.++++|||||||||++++...++.+.||+|+|||||||
T Consensus 243 ~~~Y~~G~~d~~~~~f~~~~~~~~~~~~~~lD~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel 322 (541)
T 2ac1_A 243 HDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKI 322 (541)
T ss_dssp EEEEEEEEEETTTTEEEECTTCCSSTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCSSCHHHHHHHTEECEECCCEEE
T ss_pred ceEEEEEEEecCCCeEeeCCccccccceeeecCCCcccccEEecCCCCCEEEEEEeCCCCcCCCCCCCCcccccccCEEE
Confidence 89999999998878999987655544567999999999999999756999999999999876556678999999999999
Q ss_pred EEecCCCeEEecchHHHHHhhhcce-eccceEeeCCcEEEEcCccceEEEEEEEe
Q 014220 357 WLDKSGKHLVQWPVVEIEKLRVNQV-QVPSKLLKGGSVIEVTGVTAAQVSSCLYA 410 (428)
Q Consensus 357 ~l~~dG~~L~q~Pv~el~~Lr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (428)
+|+++|++|+|+||+||++||.+.+ .+.+..+.++..+++.+..+.++|+++++
T Consensus 323 ~l~~~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 377 (541)
T 2ac1_A 323 WLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLF 377 (541)
T ss_dssp EECTTSSSEEEEECGGGGGGBCSSCEEEEEEEECTTEEEECCSSCTTEEEEEEEE
T ss_pred EEEcCCCEEEEeeHHHHHHhhccccccccceEecCCceeEecCCccceeeeEEEE
Confidence 9987886699999999999999877 77777777777777777777787777664
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-89 Score=725.30 Aligned_cols=366 Identities=57% Similarity=1.141 Sum_probs=325.5
Q ss_pred CCCCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCC-cEEEEEEeCCCCCCccCCCCCCCCCCccCCCeE
Q 014220 41 PNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWIPHDPAIYPSQQSDINGCW 119 (428)
Q Consensus 41 ~~~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~-~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~ 119 (428)
.+++|||+|||+|+.||||||||++|++|+||||||++|.++.||+ ++||||+|+||+||+++++||.|+..+|..|||
T Consensus 3 ~~~~~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~Gv~ 82 (543)
T 1st8_A 3 IEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSCW 82 (543)
T ss_dssp CSSTTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSSSSEEECCCSBCCCSGGGTTEEE
T ss_pred cCccccccccccCCcCCeECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCccceEECCeeccCCCccccCCEE
Confidence 5688999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred eeeEEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEE
Q 014220 120 SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWR 199 (428)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~ 199 (428)
||||+++++|+++|||||.+....+.|++|+|.|++|++|.+|+|++.||||.++ +++...+||||+|+|++++|+|+
T Consensus 83 SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~--~g~~~~~fRDP~vvw~~~~g~w~ 160 (543)
T 1st8_A 83 SGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPP--EGVKDDCFRDPSTAWLGPDGVWR 160 (543)
T ss_dssp EEEEEEETTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCC--TTCCTTSEECCCCCEECTTSCEE
T ss_pred cceEEEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCC--CCCCcCccCCCeEEEECCCCcEE
Confidence 9999886799999999996555689999999999999989999999889999776 66667899999987886789999
Q ss_pred EEEeeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCeee
Q 014220 200 VIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEY 279 (428)
Q Consensus 200 Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~ 279 (428)
|++|++.+..|++++|+|+||++|++.+.++......+||||||||+|+.+|.+++.+|+++.+.+|||++|. ...++
T Consensus 161 mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~vl~~s~--~~~~~ 238 (543)
T 1st8_A 161 IVVGGDRDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDW 238 (543)
T ss_dssp EEEEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCCEEEEEEEEETTCSCCCCTTCCSTTEEEEEEEEE--TTEEE
T ss_pred EEEEEecCCceEEEEEECCCCCCcEECccccccCCCCCceeCCcEEEECCCCccceEecCCCCCceEEEEecc--CCccE
Confidence 9999988778999999999999999987776654456799999999999878889999998888899999987 46789
Q ss_pred EEEEEeeCCCCcccCCCCCc--cCCCccccccCCCcccceEeeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccEEEE
Q 014220 280 YTVGTYSTAKDRYVPDEGSV--ESDSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLW 357 (428)
Q Consensus 280 Y~vG~~d~~~~~f~p~~~~~--~~~~~~~lD~G~fYA~qtf~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~ 357 (428)
|++|+||.++.+|+|+..+. +.....++|+|.|||+|||.++++||||+||||++++...++.+.||+|+|||||||+
T Consensus 239 Y~iG~~d~~~~~f~~~~~~~~~d~~~~~~lD~GdfYA~qtf~~~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~ 318 (543)
T 1st8_A 239 YTIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALW 318 (543)
T ss_dssp EEEEEEETTTTEEEETTCCCCCSSTTSEESBSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEE
T ss_pred EEEEEEeCCCCeEeeCCccccccccceeeccCCCcccccEeecCCCCCEEEEEecCCCCcCCCCCCCCccceeeeCEEEE
Confidence 99999999878999876543 3334568999999999999997569999999999998766666789999999999999
Q ss_pred EecCCCeEEecchHHHHHhhhcceeccceEeeCCcEEEEcCccceEEEEEEEe
Q 014220 358 LDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQVSSCLYA 410 (428)
Q Consensus 358 l~~dG~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (428)
|+++|++|+|+||+||++||.+.+.+.+..+..+..+++.+..+.++|+++++
T Consensus 319 l~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 371 (543)
T 1st8_A 319 IDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISF 371 (543)
T ss_dssp ECTTSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCSSCTTEEEEEEEE
T ss_pred EEeCCCEEEEeEhHHHHHhhcCcccceeEEecCCceEEecccccceeeEEEEE
Confidence 98788669999999999999988877777777777777877777787776654
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-83 Score=671.45 Aligned_cols=323 Identities=31% Similarity=0.581 Sum_probs=277.3
Q ss_pred CCCCCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeE
Q 014220 40 SPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCW 119 (428)
Q Consensus 40 ~~~~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~ 119 (428)
..+++|||+|||+||.||||||||++|++|+||||||++|.++.||+++||||+|+||+||+++|+||.|+.++|..|||
T Consensus 34 ~~~~~~Rp~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL~P~~~~d~~g~~ 113 (526)
T 3pij_A 34 KRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVF 113 (526)
T ss_dssp TCCCSSCCSSSCBCSSEEEEEEEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESSSSSEEECCCCBCCCBGGGTTEEE
T ss_pred ccCCCccccEeEeCCcCCeeCCeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCCCCCceeCeeccCCCCccccCCeE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCceEEEEcccCC------C--CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEE
Q 014220 120 SGSATILPGEKPAIFYTGIDP------H--NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAW 191 (428)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~------~--~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~ 191 (428)
||||+++.||+++|||||+.. . ..|.|++|+|.|++ |++|+|++ |||..| +.....+||||+| |
T Consensus 114 SGSav~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~g---l~~w~K~~--pvi~~P--~~~~~~~fRDP~V-~ 185 (526)
T 3pij_A 114 SGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE---LTSATKQG--MIIDCP--TDKVDHHYRDPKV-W 185 (526)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTT---CSCEEEEE--EEECCC--GGGEEEEEEEEEE-E
T ss_pred eceEEEccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCC---cceEEECC--ccccCC--CCccccccccCEE-E
Confidence 999998778899999999842 1 23889999999864 58999974 888665 3335679999997 5
Q ss_pred ECCCCeEEEEEeeec-CCccEEEEEEeCCCCCcEEccccccc-CCCCCeeecCceEEeccCCCCCccccCCCCCceeEEE
Q 014220 192 LGPDKRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269 (428)
Q Consensus 192 ~~~~g~y~Mv~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~ 269 (428)
+ ++|+|+|++|++. +..|+|++|+|+||++|++.+.++.. ...++||||||||+|+ |.+ ++.||||+
T Consensus 186 ~-~~g~w~mv~ga~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~~~~~g~mwECPdlf~l~--~~~--------g~~k~vL~ 254 (526)
T 3pij_A 186 K-TGDTWYMTFGVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIK--DKD--------GNEKWVIG 254 (526)
T ss_dssp E-ETTEEEEEEEEEETTSCEEEEEEEESSSSSCEEEEEEEECSCTTCCEEEEEEEEEEE--CTT--------SCEEEEEE
T ss_pred E-ECCEEEEEEEEecCCCCcEEEEEECCCCCcceEcCcccccCCCccCeEECCEEEEEC--CCC--------CceeEEEE
Confidence 5 5899999999876 56899999999999999998863333 3457899999999998 311 24699999
Q ss_pred EeeCC----------CCeeeEEEEEeeCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCC
Q 014220 270 VSLDD----------TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV 338 (428)
Q Consensus 270 ~s~~~----------~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~ 338 (428)
+|.++ ...++|++|+||. +.+|+|+.. ++++|+|+ |||+|||. + +||||+||||+++++.
T Consensus 255 ~s~~g~~~~~~~~~~~~~~~Y~vG~~d~-~~~f~~~~~------~~~lD~G~dfYA~qtf~-~-~gRri~~gW~~~~~~~ 325 (526)
T 3pij_A 255 FSAMGSKPSGFMNRNVSNAGYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFN-V-DGRQIVYGWMSPFVQP 325 (526)
T ss_dssp EEEESCCCBTTBSCSSSEEEEEEEEECT-TSCEEESSC------CEESCCSSSCEEEEEEE-E-TTEEEEEEEECCCSSC
T ss_pred EeccccCCCccccccccceeEEEEEEcC-CCcEEECCc------ceeeeeCCCccccceeC-C-CCCEEEEEecCCCccc
Confidence 88643 2468999999994 358988753 57899999 99999998 4 7999999999999987
Q ss_pred CCCCCCCCcccccccEEEEEecCCCeEEecchHHHHHhhhcceeccceEeeCC
Q 014220 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGG 391 (428)
Q Consensus 339 ~~~~~~gW~g~lslPR~l~l~~dG~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~ 391 (428)
.+..+.||+|+|||||+|+|+++| +|+|+|++||++||.+.+.+.+..+..+
T Consensus 326 ~~~~~~gW~g~ltlPRel~l~~~g-~L~q~Pv~el~~Lr~~~~~~~~~~~~~~ 377 (526)
T 3pij_A 326 IPMEDDGWCGQLTLPREITLGDDG-DVVTAPVAEMEGLREDTLDHGSVTLDMD 377 (526)
T ss_dssp CGGGGGTEECEECCCEEEEECTTS-SEEEEECGGGGGGBSCCEEEEEEEECSS
T ss_pred CCCCCCCccceEEeCEEEEEEeCC-cEEEeecHHHHHhhhCcccccceEeccC
Confidence 777789999999999999999878 4999999999999998877766666444
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-82 Score=662.04 Aligned_cols=321 Identities=25% Similarity=0.485 Sum_probs=271.0
Q ss_pred CCCCCCCccccccCCCCCccCCcceEEE--CCEEEEEEeeCCCCCCCCC-cEEEEEEeCCCCCCccCCCCCCCCCCccCC
Q 014220 40 SPNQPYRTGYHFQPPKNWINDPNGVMIY--KGIYHLFYQYNPKGAVWGN-IVWAHSTSKDLINWIPHDPAIYPSQQSDIN 116 (428)
Q Consensus 40 ~~~~~~Rp~~H~~p~~gw~nDPng~~~~--~G~YHlFYq~~p~~~~~g~-~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~ 116 (428)
..++.|||+|||+|+.||||||||++|+ +|+||||||++|.++.||+ ++||||+|+||+||+++++||.|+. |..
T Consensus 4 ~~~~~~Rp~~H~~P~~gwmNDPNG~~y~~~~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DLvhW~~~~~aL~P~~--d~~ 81 (509)
T 3kf3_A 4 DTSEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEH--DNE 81 (509)
T ss_dssp CCHHHHSCSSSCCCSSEEEEEEEEEEEETTTTEEEEEEEEETTCSSCCSSBEEEEEEESSSSSCEECSCCBCCSS--TTC
T ss_pred cccccccccEeecCCcCCeeCCcceEEeCCCCEEEEEEecCCCCCCCCCcCEEEEEEccCCCCcEECcccccccc--cCC
Confidence 3456899999999999999999999998 5999999999999999994 9999999999999999999999986 789
Q ss_pred CeEeeeEEEcCC-------------CceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCC
Q 014220 117 GCWSGSATILPG-------------EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSS 183 (428)
Q Consensus 117 gv~SGsav~~~d-------------g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~ 183 (428)
|||||||+++.+ |+++|+|||+. ...|.|++|+|.|++ .+|+|++.||||... ..+
T Consensus 82 G~~SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~-~~~q~q~lA~S~D~g----~~~~k~~~nPVi~~~------~~~ 150 (509)
T 3kf3_A 82 GIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNI-PDNQTQDIAFSLDGG----YTFTKYENNPVIDVS------SNQ 150 (509)
T ss_dssp EEEEEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEE-TTEEEEEEEEESSSS----SSCEECTTCCSBCCS------CSS
T ss_pred CEEeceEEEeCCccccccccccCCCCceEEEECCCC-CCCeeEEEEEECCCC----cceEEcCCCceEcCC------CCc
Confidence 999999998533 47999999976 367999999999864 689999889999532 478
Q ss_pred ccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCC
Q 014220 184 FRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPN 263 (428)
Q Consensus 184 ~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~ 263 (428)
||||+|+|++++|+|+|++|++. .|+|++|+|+||++|++.+.+.. ...+.||||||||+|+.+| +.+
T Consensus 151 fRDPkVfw~~~~g~w~Mv~g~~~--~g~i~ly~S~DL~~W~~~~~~~~-~~~G~mwECPdlf~l~~~~---------~~~ 218 (509)
T 3kf3_A 151 FRDPKVFWHEDSNQWIMVVSKSQ--EYKIQIFGSANLKNWVLNSNFSS-GYYGNQYECPGLIEVPIEN---------SDK 218 (509)
T ss_dssp CEEEEEEEETTTTEEEEEEEEGG--GTEEEEEEESSSSSCEEEEEECC-BCCCSCEEEEEEEEEEBTT---------SSC
T ss_pred ccCCeEEEECCCCEEEEEEEECC--CCEEEEEECCCCCCceEcccccc-CCccceeECCeEEEECccC---------CCC
Confidence 99999988877899999998643 57899999999999999886554 4456799999999998654 234
Q ss_pred ceeEEEEeeCC-----CCeeeEEEEEeeCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCC
Q 014220 264 TKHVLKVSLDD-----TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSS 337 (428)
Q Consensus 264 ~~~vl~~s~~~-----~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~ 337 (428)
.||||++|+++ ...++|++|+||+. +|+|+.. ..++||+|+ |||+|||.++ +||||+||||++|++
T Consensus 219 ~k~vL~~s~~~~~p~g~~~~~Y~vG~~d~~--~f~~~~~-----~~~~lD~G~DfYA~qtf~~~-~grri~igWm~~~~~ 290 (509)
T 3kf3_A 219 SKWVMFLAINPGSPLGGSINQYFVGDFDGF--QFVPDDS-----QTRFVDIGKDFYAFQTFSEV-EHGVLGLAWASNWQY 290 (509)
T ss_dssp EEEEEEEEECSCCTTSSCEEEEEEEEECSS--CEEESSC-----BCEESCCSSSCEEEEECBSC-SSSEEEEEECSCTTT
T ss_pred ceEEEEEccCCCCCCCCCceEEEEEEEeCC--EEEecCc-----cceeeccCCcceeeceeeCC-CCCEEEEEecCCccc
Confidence 79999998753 35689999999974 8988753 246899999 9999999554 799999999999987
Q ss_pred CCCCCCCCCcccccccEEEEEecC-------CCeEEecchH-HHHHhhhcceeccceEeeCCcEE
Q 014220 338 VNDDVKKGWAGIQAIPRKLWLDKS-------GKHLVQWPVV-EIEKLRVNQVQVPSKLLKGGSVI 394 (428)
Q Consensus 338 ~~~~~~~gW~g~lslPR~l~l~~d-------G~~L~q~Pv~-el~~Lr~~~~~~~~~~~~~~~~~ 394 (428)
.....+.+|+|+|||||||+|++. +.+|+|+||+ ||++||.+.+ +.+..+..+..+
T Consensus 291 ~~~~p~~~W~g~~tlPRel~l~~~~~~~~~~~~~L~q~Pv~~el~~lr~~~~-~~~~~~~~~~~~ 354 (509)
T 3kf3_A 291 ADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKLK-KKNVKLTNKKPI 354 (509)
T ss_dssp TTTSSCCSEECCBCCCEEEEEEEEESSSSCEEEEEEEEECCCTTSEEEEEEE-EEEEECCTTSCE
T ss_pred ccCCCCCCcccccccCEEEEEEecccCCCCCccEEEEEEcHHHHHHhhCcce-ecceEecCCcee
Confidence 655567899999999999999861 1269999999 9999996544 555556555443
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-82 Score=660.51 Aligned_cols=344 Identities=25% Similarity=0.514 Sum_probs=272.8
Q ss_pred CCCCCCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCe
Q 014220 39 TSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGC 118 (428)
Q Consensus 39 ~~~~~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv 118 (428)
...+++|||+|||+|+.||||||||++|++|+||||||++|.++.||+++||||+|+||+||+++|+|| | |.+||
T Consensus 22 ~~~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL-~----d~~g~ 96 (516)
T 3sc7_X 22 QAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPTAI-A----DENGV 96 (516)
T ss_dssp --CCSTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESSSSSCEEEEEEE-C----CBTTE
T ss_pred hhcCCCccccEeecCCcCCcCCCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCCCCcceecCccc-c----CCCCc
Confidence 467789999999999999999999999999999999999999999999999999999999999999999 4 34565
Q ss_pred --EeeeEEEcCCC----------ceEEEEcccCC-CCcceEEEEEEcCCCCCccceeEecCCCceecCC-C-CCCC-CCC
Q 014220 119 --WSGSATILPGE----------KPAIFYTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD-A-MNQI-NTS 182 (428)
Q Consensus 119 --~SGsav~~~dg----------~~~l~YTg~~~-~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~-~-~~~~-~~~ 182 (428)
|||||++++++ .++|||||+.. .+.|.|++|+|.|.+ ++|+|+++||||.++ . ..++ ...
T Consensus 97 ~~~SGSav~~~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g----~~w~k~~~nPVi~~~~~~~~~~~~~~ 172 (516)
T 3sc7_X 97 EAFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGL 172 (516)
T ss_dssp EEEEEEEEECTTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTT----SCCEECTTCCSBCHHHHTTTCTTSSS
T ss_pred eeEeceEEEeCCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCC----ceEEEcCCCceEcCCCcccccccCCC
Confidence 99999987553 48999999864 357899999999864 799999889999654 0 0121 124
Q ss_pred CccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccCCC-----CCeeecCceEEeccCCCCCccc
Q 014220 183 SFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKG-----TGMWECPDFFPVSTYGLNGLDT 257 (428)
Q Consensus 183 ~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~-----~~~wECPdlf~l~~~g~~~~~~ 257 (428)
+||||+|+|.+++|+|+|++|++ ..|+|++|+|+||++|++.+.+...... ++||||||||+|+.+|.
T Consensus 173 ~fRDPkV~~~~~~g~w~mv~g~~--~~~~i~ly~S~DL~~W~~~~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~----- 245 (516)
T 3sc7_X 173 ESRDPKVFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT----- 245 (516)
T ss_dssp SCEEEEEEEETTTTEEEEEEECB--TTCEEEEEEESSSSSCEEEEEEEGGGSTTCCTTCCCBCCCEEEEEECSSS-----
T ss_pred cccCCeEEEECCCCeEEEEEEEC--CCCEEEEEECCCCCCceEcccccccCCCCcccccceEECCcEEEecccCC-----
Confidence 79999998877789999999864 3568999999999999998864332222 25999999999986552
Q ss_pred cCCCCCceeEEEEeeCCC-----CeeeEEEEEeeCCCCcccCCCCCccCCCccccccCC-CcccceEee--CCCCcEEEE
Q 014220 258 SDMGPNTKHVLKVSLDDT-----KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFD--GAKNRRVLW 329 (428)
Q Consensus 258 s~~~~~~~~vl~~s~~~~-----~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d--~~~gr~il~ 329 (428)
.+.||||++|+++. ..++|++|+||+. +|+++... ...++||+|+ |||+|||.+ ..+||||+|
T Consensus 246 ----~~~k~VL~~s~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~---~~~~~lD~G~DfYA~qtf~~~~~~~gRri~w 316 (516)
T 3sc7_X 246 ----EETTWVVMMTPAEGSPAGGNGVLAITGSFDGK--SFTADPVD---ASTMWLDNGRDFDGALSWVNVPASDGRRIIA 316 (516)
T ss_dssp ----SCEEEEEEECCSSCCTTSSSCCEEEEEEECSS--CEEECCCC---TTTSBSCSSSSCEEEEECBSCCTTTCCCEEE
T ss_pred ----CCceEEEEECCCCCCCCCCCceEEEEEEccCC--eeEeCCCC---ccceeEEcCCCccccccccCCcCCCCCEEEE
Confidence 24699999998642 4679999999975 68775321 1246899999 999999974 236999999
Q ss_pred EeccCCCCCCCCCCCCCcccccccEEEEEec-CC-CeEEecchHHHHHhhhcceeccceEeeCCcEEEEcCccceEEEEE
Q 014220 330 GWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-SG-KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQVSSC 407 (428)
Q Consensus 330 gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~-dG-~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (428)
|||++++... .+.+|+|+|||||||+|++ +| .+|+|+||+||++||.+...+.+..+..+..+ +..+.+.++||+
T Consensus 317 ~w~~~~~~~~--pt~gW~g~ltlPRel~l~~~~~~~~L~q~Pv~El~~Lr~~~~~~~~~~~~~~~~~-l~~~~~~~~el~ 393 (516)
T 3sc7_X 317 AVMNSYGSNP--PTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVR 393 (516)
T ss_dssp EEECCSTTCS--SCSSEECEECCCEEEEEEEETTEEEEEEEECGGGGGGEEEEEEEEEEEECTTCCB-STTCCCSSEEEE
T ss_pred EECCCccCCC--CCCCcccccccCEEEEEEecCCceEEEeCCHHHHHhhhccceeecceEecCCceE-ccCCCceEEEEE
Confidence 9998876543 3579999999999999985 33 47999999999999998776666666544432 333344555555
Q ss_pred EEe
Q 014220 408 LYA 410 (428)
Q Consensus 408 ~~~ 410 (428)
+++
T Consensus 394 ~~~ 396 (516)
T 3sc7_X 394 VAF 396 (516)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-81 Score=658.97 Aligned_cols=348 Identities=29% Similarity=0.505 Sum_probs=279.4
Q ss_pred CCCCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCC----CCCCCccCC
Q 014220 41 PNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI----YPSQQSDIN 116 (428)
Q Consensus 41 ~~~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al----~P~~~~D~~ 116 (428)
++++|||+|||+|+.||||||||++|++|+||||||++|.++.||+++||||+|+||+||+++++|| .|+ +|..
T Consensus 3 ~~~~~Rp~~H~~P~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dlv~W~~~~~al~~~g~P~--~d~~ 80 (518)
T 1y4w_A 3 YDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGS--DVTE 80 (518)
T ss_dssp CCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTS--CCCB
T ss_pred CCCCccccEeeeCCcCceECCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCccEEECCceEecCCCCC--CCCC
Confidence 4678999999999999999999999999999999999999999999999999999999999999999 665 5778
Q ss_pred CeEeeeEEEcCCC----------ceEEEEcccCCC------------CcceEEEEEEcCCCCCccceeEec-CCCceecC
Q 014220 117 GCWSGSATILPGE----------KPAIFYTGIDPH------------NRQVQNLAVPKNLSDPYLREWVKS-PKNPLMAP 173 (428)
Q Consensus 117 gv~SGsav~~~dg----------~~~l~YTg~~~~------------~~~~q~lA~S~D~~d~~l~~w~k~-~~nPvi~~ 173 (428)
|||||||+++.+| +++|||||+.+. ..|.|++|+|.|++ .+|+|+ ++||||.+
T Consensus 81 g~~SGsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g----~~w~k~~~~~pvi~~ 156 (518)
T 1y4w_A 81 MYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPN 156 (518)
T ss_dssp EEEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCS
T ss_pred ceEeeeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCC----ceEEEcCCCCCeEec
Confidence 9999999987554 899999998542 24899999999853 799998 78999976
Q ss_pred CCCCC---CCCCCccCCeEEEECCCCeEEEE--EeeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEec
Q 014220 174 DAMNQ---INTSSFRDPTTAWLGPDKRWRVI--IGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 174 ~~~~~---~~~~~~RDP~V~~~~~~g~y~Mv--~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (428)
+ +. ....+||||+|+|.+++|+|+|+ +|++. .|++|+|+||++|++.+.+......++||||||||+|.
T Consensus 157 ~--~~~y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~~----~i~ly~S~DL~~W~~~~~~~~~~~~~~mwECPdlf~l~ 230 (518)
T 1y4w_A 157 P--PSPYEAEYQNFRDPFVFWHDESQKWVVVTSIAELH----KLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLP 230 (518)
T ss_dssp C--CTTCGGGTTSEEEEEEEEETTTTEEEEEEEEGGGT----EEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEE
T ss_pred C--CcccccCCCCcCCCcEeEECCCCcEEEEEEecCCC----eEEEEECCCCCCCeECccccccCCCCCeEECCeEEEee
Confidence 5 32 24689999998877668999999 66542 69999999999999987644333457899999999996
Q ss_pred cCCCCCccccCCCCCceeEEEEeeCC-------CCeeeEEEEEeeCCCCcccCCCCCc--cCCCccccccCC-CcccceE
Q 014220 249 TYGLNGLDTSDMGPNTKHVLKVSLDD-------TKHEYYTVGTYSTAKDRYVPDEGSV--ESDSGLRFDYGK-YYASKTF 318 (428)
Q Consensus 249 ~~g~~~~~~s~~~~~~~~vl~~s~~~-------~~~~~Y~vG~~d~~~~~f~p~~~~~--~~~~~~~lD~G~-fYA~qtf 318 (428)
++|. .+.||||++|+++ ...++|++|+||+. +|+|+.... ....+++||+|+ |||+|||
T Consensus 231 ~~g~---------~~~k~vL~~s~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf 299 (518)
T 1y4w_A 231 LDSG---------NSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGY 299 (518)
T ss_dssp BTTS---------SCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEEC
T ss_pred cCCC---------CceeEEEEeccCCCCccccccCCcEEEEEEeeCC--EEEeCCcccccccccceEEccCCCCcccccc
Confidence 5441 2359999999854 24689999999974 798875211 112367999998 9999999
Q ss_pred eeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccEEEEEec-CC-CeEEecchHHHHHhhhcceeccceEeeCCcEEEE
Q 014220 319 FDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-SG-KHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEV 396 (428)
Q Consensus 319 ~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~-dG-~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~ 396 (428)
.+.++|||||||||++|++.......||+|+|||||||+|++ +| .+|+|+||+||++||.+.+.+.+..+..+....+
T Consensus 300 ~d~~~gRri~~gWm~~~~~~~~~pt~gW~g~ltlPRel~l~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~~~~ 379 (518)
T 1y4w_A 300 NGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTN 379 (518)
T ss_dssp BSCCGGGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEECSCGGGTBCSSCSEEEEEEEECSEECC
T ss_pred ccCCCCCEEEEEecCCCccccccCCCCcCcccccCeEEEEEecCCcCeEEEeehHHHHhhhccceeccceeeccccceee
Confidence 984479999999999998754445589999999999999985 33 4799999999999999876655554443333333
Q ss_pred cCccceEEEEEEEec
Q 014220 397 TGVTAAQVSSCLYAS 411 (428)
Q Consensus 397 ~~~~~~~~~~~~~~~ 411 (428)
....+.+++|++++.
T Consensus 380 ~~~~~~~~el~~~~~ 394 (518)
T 1y4w_A 380 TTTTGETFKVDLSFS 394 (518)
T ss_dssp CEECCSSEEEEEEEE
T ss_pred cCCCCeEEEEEEEEe
Confidence 333344555555543
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-80 Score=644.10 Aligned_cols=308 Identities=23% Similarity=0.433 Sum_probs=260.4
Q ss_pred CccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEE
Q 014220 46 RTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI 125 (428)
Q Consensus 46 Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~ 125 (428)
.|+|||+||.||||||||++|++|+||||||++|.++.||+ ||||+|+||+||+++++||.|+. ..||||||||+
T Consensus 1 ~P~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~~g~--WgHa~S~DLvhW~~~~~aL~P~~---~~g~~SGSav~ 75 (492)
T 4ffh_A 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG--WDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAVV 75 (492)
T ss_dssp -CCSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSTTCCCE--EEEEEESSSSSCEEEEEEECCBT---TBCCCCEEEEE
T ss_pred CCcEeEcCCCCCeeCCeeeEEECCEEEEEEECCCCCCCCCc--EEEEEeCCCCccEECCCCCCCCC---CCCEEeceEEE
Confidence 48999999999999999999999999999999999999998 99999999999999999999975 57999999998
Q ss_pred cCCCc-------eEEEEcccCC--CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCC------------c
Q 014220 126 LPGEK-------PAIFYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSS------------F 184 (428)
Q Consensus 126 ~~dg~-------~~l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~------------~ 184 (428)
+++|+ ++|||||+.+ ...|.|++|+|.|++ ++|+|+ +||||.+| .. .+ |
T Consensus 76 ~~~~~~g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g----~~w~k~-~nPvi~~p--~~---~~~~~~~~~~~~~~f 145 (492)
T 4ffh_A 76 DTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG----FTFTAL-PDPVIVNT--DG---RAATTPAEIENAEWF 145 (492)
T ss_dssp ETTCSSSSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSS----SSCEEC-SSCSBCCT--TT---TTCCSHHHHHHHTCE
T ss_pred eCCCccccCCCcEEEEEeecccCCCCcEEEEEEEeCCCC----ceEEEc-CccccCCC--Cc---cccccccccccCCCC
Confidence 76664 9999999864 357999999999864 799999 89999765 22 34 9
Q ss_pred cCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCc
Q 014220 185 RDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNT 264 (428)
Q Consensus 185 RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~ 264 (428)
|||+|+|.+++|+|+|++ ++ .++|++|+|+||++|++.+.+......++||||||||+|+.++ ++.
T Consensus 146 RDP~V~~~~~~g~w~mv~-a~---~~~i~ly~S~DL~~W~~~~~~~~~~~~g~mwECPdlf~l~~~~----------~~~ 211 (492)
T 4ffh_A 146 RDPKIHWDTARGEWVCVI-GR---LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTR 211 (492)
T ss_dssp EEEEEEEETTTTEEEEEE-EE---TTEEEEEEESSSSSCEECCCEECSCGGGCCCEEEEEEEEECTT----------SCE
T ss_pred cCCEEEEECCCCEEEEEE-EC---CCeEEEEECCCCCCceEeccccccCCccceEECCeEEEECCCC----------CCc
Confidence 999988776789999999 44 3589999999999999998654433456799999999998532 246
Q ss_pred eeEEEEeeCC-----CCeeeEEEEEeeCCCCcccCCCCCccCCCccccccCC-CcccceEe--eCCCCcEEEEEeccCCC
Q 014220 265 KHVLKVSLDD-----TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFF--DGAKNRRVLWGWVNESS 336 (428)
Q Consensus 265 ~~vl~~s~~~-----~~~~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~--d~~~gr~il~gW~~~~~ 336 (428)
||||++|.++ ...++|++|+||+ .+|+|+.. .+++||+|+ |||+|||. |.++||||+||||++|+
T Consensus 212 k~vL~~s~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~~grri~~gW~~~~~ 284 (492)
T 4ffh_A 212 HWVLAASMDAYGIGLPMTYAYWTGTWDG--EQFHADDL-----TPQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWK 284 (492)
T ss_dssp EEEEEEECCCGGGTCCSSEEEEEEEECS--SCEEESCS-----SCEESCCSSCCEEEEEEECSSCTTTCEEEEEECCCTT
T ss_pred eEEEEEccCCCCCCCccceEEEEEEeeC--CEEEeCCC-----CccceeeCCCcccCCeEccCCCCCCCEEEEEecCCCc
Confidence 9999999754 4568999999995 58998753 257999999 99999999 34479999999999998
Q ss_pred CC---CCCC-CCCCcccccccEEEEEec--CC-CeEEecchHHHHHhhhcceeccceEee
Q 014220 337 SV---NDDV-KKGWAGIQAIPRKLWLDK--SG-KHLVQWPVVEIEKLRVNQVQVPSKLLK 389 (428)
Q Consensus 337 ~~---~~~~-~~gW~g~lslPR~l~l~~--dG-~~L~q~Pv~el~~Lr~~~~~~~~~~~~ 389 (428)
+. .++. ..||+|+|||||||+|++ +| .+|+|+||+||++||.+.+.+.+..+.
T Consensus 285 ~~~~~~pt~~~~gW~g~~tlPRel~l~~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~ 344 (492)
T 4ffh_A 285 YAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVD 344 (492)
T ss_dssp TCSSCCHHHHHHSEECCBCCCEEEEEEECTTSCEEEEEEECGGGGGGEEEEEEECCEEES
T ss_pred cccccCCcccccCcccccccCEEEEEEEcCCCeeEEEEeehHHHHHhhccceeecceecc
Confidence 53 2333 378999999999999994 34 379999999999999988777666554
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-78 Score=643.01 Aligned_cols=324 Identities=19% Similarity=0.305 Sum_probs=267.5
Q ss_pred CccccCCCCCCCCCCccccccCCCCCccCCcceEE--ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccC----CC
Q 014220 32 NLQTSQSTSPNQPYRTGYHFQPPKNWINDPNGVMI--YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH----DP 105 (428)
Q Consensus 32 ~~~~~~~~~~~~~~Rp~~H~~p~~gw~nDPng~~~--~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~----~~ 105 (428)
+|.+.++....++|||+|||+|+.||||||||++| ++|+|||||||+|. | ||||+|+|||||+++ ++
T Consensus 13 ~l~~~~~~~~~~~~Rp~~H~~p~~gwmNDPnG~~yD~~~G~YHlFYQ~~P~----g---WgHa~S~DLvhW~~~~~~~~~ 85 (634)
T 3lig_A 13 NLSTLPNNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGD----G---IAGATTANLATYTDTSDNGSF 85 (634)
T ss_dssp CGGGSCTTTTTTTSCCSSSCCCSSEEEEEECCCEECTTTCCEEEEEEETTS----C---EEEEEESSSSCCEESCSTTCE
T ss_pred HHHHhhhcccccccCccEeEcCCCCcccCCccceEeCCCCEEEEEEecCCC----c---eeEEEecCcCceeECcCCCCc
Confidence 78888888999999999999999999999999999 89999999999994 3 999999999999999 89
Q ss_pred CCCCCCCccCCCeEeeeEEEc-CCCceEEEEcccCC----------CCcceEEEEEEcCCCCCccceeEecCCCceecCC
Q 014220 106 AIYPSQQSDINGCWSGSATIL-PGEKPAIFYTGIDP----------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD 174 (428)
Q Consensus 106 al~P~~~~D~~gv~SGsav~~-~dg~~~l~YTg~~~----------~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~ 174 (428)
||.|+..+|..||||||||++ .+|+++|||||+.+ .+.|.|++|+|.|+ +++|+|++.||||..+
T Consensus 86 aL~P~~~~D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~----g~~w~K~~~nPVi~~~ 161 (634)
T 3lig_A 86 LIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDG----GRRFDKLDQGPVIADH 161 (634)
T ss_dssp EECSCSSSCSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGG----GTEEEECSSSCSBCSS
T ss_pred eecCCCCCCCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCC----CCEEEECCCCceEcCC
Confidence 999999999999999999864 27899999999852 24689999999885 3899999889999743
Q ss_pred CCCCCCCCCccCCeEEE----------------------------ECCCCeEEEEEeeec-CCccEEEEEE--eCC---C
Q 014220 175 AMNQINTSSFRDPTTAW----------------------------LGPDKRWRVIIGSKI-NRKGLAILYR--SKD---F 220 (428)
Q Consensus 175 ~~~~~~~~~~RDP~V~~----------------------------~~~~g~y~Mv~ga~~-~~~G~i~ly~--S~D---l 220 (428)
++++...+||||+|+| ..++|+|||++|++. +..|+|+||+ |+| |
T Consensus 162 -p~g~~~~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~lY~~~s~dd~~l 240 (634)
T 3lig_A 162 -PFAVDVTAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEF 240 (634)
T ss_dssp -STTCCEEEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEEEEEGGGCTTCC
T ss_pred -CcccCCCccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEEEEeCCCCcccc
Confidence 1455678999999765 114789999999987 4578999999 778 9
Q ss_pred CCcEEccccccc-------------CCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCC-----------C
Q 014220 221 VHWIKAKHPLHS-------------VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT-----------K 276 (428)
Q Consensus 221 ~~W~~~~~~l~~-------------~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~-----------~ 276 (428)
.+|++.+.++.. ...++||||||||+|+.+|.. ..+.+|||++|+++. +
T Consensus 241 ~~W~~~g~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~-------~~~~~~vl~~~~~g~~~~~~~~~~~~~ 313 (634)
T 3lig_A 241 QYWEYLGEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHD-------PQTGEVFVTLGTEGSGLPIVPQVSSIH 313 (634)
T ss_dssp SCEEEEEEEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBC-------TTTSEEEEEEEEEECCSSCCTTCCCEE
T ss_pred CCceEecccccccccccccccccccCceeeEEECCCEEEECCcccC-------CCCCcEEEEECCCCCCCcccccccccc
Confidence 999999864321 124679999999999954310 123589999997531 2
Q ss_pred eeeEEEEEee--CC----CCcccCCCCCccCCCccccccCC-CcccceEeeCC----------C-CcEEEEEeccCCCCC
Q 014220 277 HEYYTVGTYS--TA----KDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGA----------K-NRRVLWGWVNESSSV 338 (428)
Q Consensus 277 ~~~Y~vG~~d--~~----~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~----------~-gr~il~gW~~~~~~~ 338 (428)
.+.|++|+|+ .+ +.+|+|+. .++||+|+ |||+|||.++. + |||||||||+++++.
T Consensus 314 ~~~y~~G~~~~d~~~~~~~~~f~~~~-------~~~lD~G~dfYA~qtf~~~~~~~~~~~~~~~~gRri~igWm~~~~~~ 386 (634)
T 3lig_A 314 DMLWAAGEVGVGSEQEGAKVEFSPSM-------AGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVSFVWLTGDQYE 386 (634)
T ss_dssp EEEEEEEEEEECTTSSSCSEEEEEEE-------EEEEECCTTEEEEEEEEECTTSHHHHHHTCCSCEEEEEEEECSSTTT
T ss_pred ccEEEEEEEecCcccccCceeEecCC-------ccccccCcCceecceecccccccccccccCCCCCEEEEEeCCCCccc
Confidence 4689999994 43 45776653 57899999 99999999873 2 999999999999854
Q ss_pred ----CCCCCCCCcccccccEEEEEe-----cC------------------C----CeEEecchHHH-HHhhhcce
Q 014220 339 ----NDDVKKGWAGIQAIPRKLWLD-----KS------------------G----KHLVQWPVVEI-EKLRVNQV 381 (428)
Q Consensus 339 ----~~~~~~gW~g~lslPR~l~l~-----~d------------------G----~~L~q~Pv~el-~~Lr~~~~ 381 (428)
.++.+.||+|+|||||||+|+ .+ | .+|.|+|++|| ++||.+..
T Consensus 387 ~~~~~pt~~~gW~g~ltlPReL~l~~~~~v~~~~l~~~~~~s~~~~~~~~G~~t~~~L~q~Pv~El~~~Lr~~~~ 461 (634)
T 3lig_A 387 QADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGS 461 (634)
T ss_dssp TCSSCCHHHHSEECEECCCEEEEEEEEEEEECSHHHHCSSCSCEEEEECSSEEEEEEEEEEECHHHHHHHHHTCE
T ss_pred ccccCCCCCCCCccccccCEEEEEEEecCccCccccccccccceeccccCCccccCEEEEeecHHHHHHhhccce
Confidence 334567999999999999995 12 2 27999999999 89998764
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-75 Score=604.84 Aligned_cols=321 Identities=30% Similarity=0.600 Sum_probs=269.6
Q ss_pred CCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeE
Q 014220 44 PYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSA 123 (428)
Q Consensus 44 ~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsa 123 (428)
.|||+|||+|+.||||||||++|++|+||||||++|.++.|++++||||+|+||+||+++++||.|+.. ..|||||||
T Consensus 1 ~~Rp~~H~~p~~gw~nDPng~~~~~G~yhlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~~~aL~p~~~--~~g~~sgsa 78 (432)
T 1w2t_A 1 LFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDE--THGVFSGSA 78 (432)
T ss_dssp CCSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSCCSCEEEEEEESSSSSCEEEEEEECCSST--TEEEEEEEE
T ss_pred CCCcCCcccCCCCCeECCCcCeEECCEEEEEEecCCCCCCCCCcEEEEEEcCCCcCeEECCccCCCCCC--CCCEEeeEE
Confidence 489999999999999999999999999999999999999999999999999999999999999999865 579999999
Q ss_pred EEcCCCceEEEEcccCC-----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeE
Q 014220 124 TILPGEKPAIFYTGIDP-----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRW 198 (428)
Q Consensus 124 v~~~dg~~~l~YTg~~~-----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y 198 (428)
++ .+|+++|||||+.. ...+.|++|+|+|+ .+|+|++.+||+..+ +.....+||||+| |+ ++|+|
T Consensus 79 v~-~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~-----~~w~k~~~~Pvi~~~--p~~~~~~fRDP~V-f~-~dg~~ 148 (432)
T 1w2t_A 79 VE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKP--PEEGTHAFRDPKV-NR-SNGEW 148 (432)
T ss_dssp EE-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSC--SSTTEEEEEEEEE-EE-CSSSE
T ss_pred EE-ECCEEEEEEecCccCCCCCCceEEEEEEEeCCC-----CeEEecCCCceEeCC--CccccccccCCEE-EE-ECCEE
Confidence 87 59999999999864 24688999999884 589998789999764 3323678999995 56 48999
Q ss_pred EEEEeeec-CCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCe
Q 014220 199 RVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKH 277 (428)
Q Consensus 199 ~Mv~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~ 277 (428)
+|++|++. +..|+|.+|+|+||++|++.+.+..... ++|||||+||+++ | +|||++|.++...
T Consensus 149 ~m~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~-g~~~EcP~lf~~~--g-------------~~vL~~s~~g~~~ 212 (432)
T 1w2t_A 149 RMVLGSGKDEKIGRVLLYTSDDLFHWKYEGAIFEDET-TKEIDCPDLVRIG--E-------------KDILIYSITSTNS 212 (432)
T ss_dssp EEEEEEEETTTEEEEEEEEESSSSSCEEEEEEEEETT-CSCCEEEEEEEET--T-------------EEEEEEEETTTTE
T ss_pred EEEEEEecCCCCcEEEEEECCCCCCceEccccccCCC-CCEEECCeEEEEC--C-------------EEEEEEeCCCCcc
Confidence 99999886 4678999999999999999876544433 6799999999997 4 9999999988778
Q ss_pred eeEEEEEeeCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCC--CCCCCCCCCcccccccE
Q 014220 278 EYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSS--VNDDVKKGWAGIQAIPR 354 (428)
Q Consensus 278 ~~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~--~~~~~~~gW~g~lslPR 354 (428)
+.|++|+|| . ..|.++ .++++|+|+ |||+|||.++ + |||+||||++++. ..++.+.||+|+|||||
T Consensus 213 ~~Y~~G~~d-~-~~~~~~-------~~~~lD~G~dfYA~qtf~~~-~-rri~~gW~~~~~~~~~~pt~~~gW~g~~tlPR 281 (432)
T 1w2t_A 213 VLFSMGELK-E-GKLNVE-------KRGLLDHGTDFYAAQTFFGT-D-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPR 281 (432)
T ss_dssp EEEEEEEEE-T-TEEEEE-------EEEESCCSSSCEEEEECBSC-S-SEEEEEESSCTTTGGGCCGGGGTEECCBCCCE
T ss_pred eEEEEEEec-C-CEEcCC-------ccceeccCCCccccceecCC-C-CEEEEEEecCcccccccCcccCCCcCceeccE
Confidence 899999999 5 455443 257999998 9999999987 4 9999999999987 45556789999999999
Q ss_pred EEEEecCCCeEEecchHHHHHhhhcceeccceEeeCCcEEEEcCccceEEEEEEEe
Q 014220 355 KLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQVSSCLYA 410 (428)
Q Consensus 355 ~l~l~~dG~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (428)
+|+|+ +| +|+|+|++||++||.+.+.+.+ .+ ...+....+.++++++++
T Consensus 282 ~l~l~-~g-~L~q~Pv~el~~lr~~~~~~~~-~~----~~~~~~~~~~~~e~~~~~ 330 (432)
T 1w2t_A 282 ELYVE-NN-ELKVKPVDELLALRKRKVFETA-KS----GTFLLDVKENSYEIVCEF 330 (432)
T ss_dssp EEEEE-TT-EEEEEECGGGGGGEEEEEEEES-SC----EEEECCCSSSCEEEEEEE
T ss_pred EEEEe-CC-EEEEEEcHHHHHhhccceeccc-cc----eeEecCCCCeEEEEEEEE
Confidence 99997 68 7999999999999998755433 22 123333344555555543
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-31 Score=277.77 Aligned_cols=277 Identities=18% Similarity=0.177 Sum_probs=184.3
Q ss_pred cCC-cceEE-ECCEEEEEEe-eCCCCCCCCCcEEEEEEeC----CCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 014220 59 NDP-NGVMI-YKGIYHLFYQ-YNPKGAVWGNIVWAHSTSK----DLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (428)
Q Consensus 59 nDP-ng~~~-~~G~YHlFYq-~~p~~~~~g~~~Wgha~S~----Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~ 131 (428)
+|| +|-++ ++|.+|+|++ ..|+ ++..||.|+.|+ ||+||++.++++.|+.++ .|||||||++..||++
T Consensus 134 ~D~~~G~v~~~~G~~vvf~L~~dP~---~~d~Hi~~~ys~~g~~DLvhW~~~G~~~~~~~~~--~g~WSGSAi~~~DG~l 208 (571)
T 2yfr_A 134 QDAKTGYVSNWNGYQLVIGMMGVPN---VNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPV--IQQWSGSATLNKDGSI 208 (571)
T ss_dssp BCTTTCCBCCBTTEEEEEEEEECTT---SCCCEEEEEEEETTCCCGGGCEEEEETTCSCCTT--EEEEEEEEEECTTSCE
T ss_pred EecCCCcEEEecCceEEEEEccCCC---CCCcEEEEEECcCCccccCCccCCCeEcCCCCCC--CceECCeeEECcCCEE
Confidence 555 56655 6788889999 6666 578899999998 779999999999887433 7999999997569999
Q ss_pred EEEEcccCCC--CcceEEEEEE-------cCCCCCccceeEecCCCceecCCC--C----------CCCCCCCccCCeEE
Q 014220 132 AIFYTGIDPH--NRQVQNLAVP-------KNLSDPYLREWVKSPKNPLMAPDA--M----------NQINTSSFRDPTTA 190 (428)
Q Consensus 132 ~l~YTg~~~~--~~~~q~lA~S-------~D~~d~~l~~w~k~~~nPvi~~~~--~----------~~~~~~~~RDP~V~ 190 (428)
+|||||+... ....|++|+. .+..+..+..|++. .+++.++. + .+....+||||+|
T Consensus 209 ~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~--~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP~V- 285 (571)
T 2yfr_A 209 QLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDND--HIVFEGDGYHYQTYDQWKETNKGADNIAMRDAHV- 285 (571)
T ss_dssp EEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEE--EEEECCCSSSBCCHHHHHHHCSSCCCCCCEEEEE-
T ss_pred EEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCC--CceecCCCcccccccccccccccCCcccCcCCeE-
Confidence 9999997542 2345666542 11111113345443 35554431 0 0125689999995
Q ss_pred EECCCCeEEEEEeeecCC------------------------------------------ccEEEEEEeCCC----CCcE
Q 014220 191 WLGPDKRWRVIIGSKINR------------------------------------------KGLAILYRSKDF----VHWI 224 (428)
Q Consensus 191 ~~~~~g~y~Mv~ga~~~~------------------------------------------~G~i~ly~S~Dl----~~W~ 224 (428)
|++++|+|||++|++... .|+|.+|+|+|+ .+|+
T Consensus 286 f~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~~n~~~We 365 (571)
T 2yfr_A 286 IDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSVAK 365 (571)
T ss_dssp EECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCTTSCCEEE
T ss_pred EEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCcCCcccce
Confidence 664569999999998632 489999999775 5899
Q ss_pred EcccccccC-CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCC-----------------eeeE-EEEEe
Q 014220 225 KAKHPLHSV-KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTK-----------------HEYY-TVGTY 285 (428)
Q Consensus 225 ~~~~~l~~~-~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~-----------------~~~Y-~vG~~ 285 (428)
+.+ +|... ....|||||++|+++ | +|||++|.+... .+.| ++.
T Consensus 366 ~~~-pL~~~~~v~dm~EcP~lf~~d--G-------------~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~vS-- 427 (571)
T 2yfr_A 366 VYS-PLISAPMVSDEIERPDVVKLG--N-------------KYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVS-- 427 (571)
T ss_dssp ECC-CSEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEEEE--
T ss_pred ecc-ccccCCCcCceeecCcEEEEC--C-------------EEEEEEeCCCCcccccccccccccCcCCceEEEEEEe--
Confidence 886 45433 345699999999998 5 888888865311 2333 444
Q ss_pred eCCCCcccCCCCC---ccC--CCccccccCCCcccceEeeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccEEEEEec
Q 014220 286 STAKDRYVPDEGS---VES--DSGLRFDYGKYYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDK 360 (428)
Q Consensus 286 d~~~~~f~p~~~~---~~~--~~~~~lD~G~fYA~qtf~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~ 360 (428)
+.-.|.|.|-... ... ....+++-=.+||.++..+ .+++++++||.++... ...+|.|.|+-+..|.++.
T Consensus 428 dsl~GPy~plng~glVL~~~~P~~~~~~tyS~Ya~p~~~~--~~~~lv~s~i~~r~~~---~~~~~~GTlap~~~vq~~~ 502 (571)
T 2yfr_A 428 DNLTHGYVPLNESGVVLTASVPANWRTATYSYYAVPVEGR--DDQLLITSYITNRGEV---AGKGMHATWAPSFLLQINP 502 (571)
T ss_dssp SSSSSCCEETTTTSEEEECCSCTTSTTCEEEEEEEEETTE--EEEEEEEEEESCSTTT---TCTTCCCEECEEEEEEEET
T ss_pred CCCCCCCeeCCCCceeecCCCCCccccccceeEEEecccC--CCcEEEEEEeCCcCCC---CCcccceeecCcEEEEEcC
Confidence 2234566551100 000 0011232222788887654 3578999999998653 3467999998777778877
Q ss_pred CCCeEE
Q 014220 361 SGKHLV 366 (428)
Q Consensus 361 dG~~L~ 366 (428)
||.+.+
T Consensus 503 dgt~~~ 508 (571)
T 2yfr_A 503 DNTTTV 508 (571)
T ss_dssp TTEEEE
T ss_pred CCCEEe
Confidence 875433
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=265.83 Aligned_cols=275 Identities=17% Similarity=0.140 Sum_probs=184.6
Q ss_pred CCCccCCcceEEE--------CCEEEEEEeeCCCCCCCCCcEEEEEEeC----CCCCCccCCCCCCCC------CCc--c
Q 014220 55 KNWINDPNGVMIY--------KGIYHLFYQYNPKGAVWGNIVWAHSTSK----DLINWIPHDPAIYPS------QQS--D 114 (428)
Q Consensus 55 ~gw~nDPng~~~~--------~G~YHlFYq~~p~~~~~g~~~Wgha~S~----Dlv~W~~~~~al~P~------~~~--D 114 (428)
..|+.|+. ++++ +|..++|++..+... ++..||+|+.|+ ||+||++.++++.+. .++ +
T Consensus 55 ~~~VWDsW-pl~d~~G~~~~~~g~~lif~L~~dp~~-~~~~hi~~~ys~~g~~dl~~W~~~G~vfp~~~~~~~~~~~~~~ 132 (447)
T 1oyg_A 55 GLDVWDSW-PLQNADGTVANYHGYHIVFALAGDPKN-ADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKD 132 (447)
T ss_dssp TCEEEEEE-EEECTTSSBCCBTTEEEEEEEEECTTC-TTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGG
T ss_pred CCcccccc-eEECCCCCEEEecCcEEEEEEcCCCCC-CCceEEEEEECcCCCcccCCccCCCeecCCCccccccccccCC
Confidence 58998874 6665 355559998765332 578999999999 569999999855443 233 3
Q ss_pred CCCeEeeeEEEcCCCceEEEEcccCCC--CcceEEEEE-----EcCCCCCccceeEecCCCceecCCCC-----------
Q 014220 115 INGCWSGSATILPGEKPAIFYTGIDPH--NRQVQNLAV-----PKNLSDPYLREWVKSPKNPLMAPDAM----------- 176 (428)
Q Consensus 115 ~~gv~SGsav~~~dg~~~l~YTg~~~~--~~~~q~lA~-----S~D~~d~~l~~w~k~~~nPvi~~~~~----------- 176 (428)
..+||||||++..||+++|||||+... ..|++..|. +.|+ ..+..|++. ++++.++..
T Consensus 133 ~~g~WSGSAi~~~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dg--v~~~~~~~~--~~l~~~Dg~~Yq~~~q~~~~ 208 (447)
T 1oyg_A 133 QTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSS--LNINGVEDY--KSIFDGDGKTYQNVQQFIDE 208 (447)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSC--EEEEEEEEE--EEEECCCSSSBCCHHHHHHH
T ss_pred CCCEECCceEECcCCEEEEEEEeecCCCCCceEEEEEecceeecCCC--cceecccCC--CceEcCCCcccccccccccc
Confidence 689999999976699999999998643 234443333 2322 113445442 466654310
Q ss_pred ---CCCCCCCccCCeEEEECCCCeEEEEEeeecCC------------------------------------------ccE
Q 014220 177 ---NQINTSSFRDPTTAWLGPDKRWRVIIGSKINR------------------------------------------KGL 211 (428)
Q Consensus 177 ---~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~------------------------------------------~G~ 211 (428)
+..+..+||||+| |++ +|+|||+++++... .|+
T Consensus 209 ~~~~~~~~~~fRDP~V-f~d-~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 286 (447)
T 1oyg_A 209 GNYSSGDNHTLRDPHY-VED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGA 286 (447)
T ss_dssp TGGGGTCCCCCEEEEE-EEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEE
T ss_pred ccccCCCccccCCCeE-EeE-CCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcE
Confidence 1123579999996 553 69999999998732 379
Q ss_pred EEEE-EeCCCCCcEEcccccccC-CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCC--------eeeEE
Q 014220 212 AILY-RSKDFVHWIKAKHPLHSV-KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTK--------HEYYT 281 (428)
Q Consensus 212 i~ly-~S~Dl~~W~~~~~~l~~~-~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~--------~~~Y~ 281 (428)
|+++ .|+|+.+|++.+ +|... ....+||||++|+++ | +|||++|..... ...|+
T Consensus 287 Igl~~~s~Dl~~W~~~~-pL~~~~~v~d~~EcPdlfk~d--G-------------kyyLf~S~~~s~~~~~g~~~~~vy~ 350 (447)
T 1oyg_A 287 LGMIELNDDYTLKKVMK-PLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYM 350 (447)
T ss_dssp EEEEEECTTSSEEEEEE-EEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEE
T ss_pred EEEEEcCCCCCCceEcc-ccccCCCCCCceEcCcEEEEC--C-------------EEEEEEecCCCcccccCcCCCcEEE
Confidence 9877 699999999976 55543 345689999999998 5 889998875321 24676
Q ss_pred EEEe-eCCCCcccCCCC--CccC---CCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccE
Q 014220 282 VGTY-STAKDRYVPDEG--SVES---DSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPR 354 (428)
Q Consensus 282 vG~~-d~~~~~f~p~~~--~~~~---~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR 354 (428)
+|-. +.-.+.|.|-.. ..-+ ....+++ +- +||.++. +. +++++++||.+... ...|.|.|+-+.
T Consensus 351 ~g~vsdsl~GPy~plngsGlVl~~~~p~~~~~~-~ys~ya~p~~-~~--~~~~v~sf~~~~~~-----~~~~ggtlap~~ 421 (447)
T 1oyg_A 351 LGYVSNSLTGPYKPLNKTGLVLKMDLDPNDVTF-TYSHFAVPQA-KG--NNVVITSYMTNRGF-----YADKQSTFAPSF 421 (447)
T ss_dssp EEEEESSTTCCCEEGGGTSEEEEECCCTTCTTC-EEEEEEECCS-SS--SEEEEEEEESCTTS-----CSSCCCEECBCE
T ss_pred EEEEcCCCCCCCeeCCCCceeecCCCCCccccc-cceeEEEecC-CC--CeEEEEEEeCCCCc-----ccccceeecCcE
Confidence 6632 333456654100 0000 0012344 33 8999888 53 58999999998853 246999999888
Q ss_pred EEEEecCC
Q 014220 355 KLWLDKSG 362 (428)
Q Consensus 355 ~l~l~~dG 362 (428)
.|.++.++
T Consensus 422 ~v~~~gd~ 429 (447)
T 1oyg_A 422 LLNIKGKK 429 (447)
T ss_dssp EEEEETTE
T ss_pred EEEEcCCc
Confidence 88888554
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.8e-25 Score=221.54 Aligned_cols=195 Identities=17% Similarity=0.279 Sum_probs=151.2
Q ss_pred CCCCCCccccccCCCC--------CccCCcceEEECCEEEEEEeeCCCCC-------------CCCCcEEEEEEeCCCCC
Q 014220 41 PNQPYRTGYHFQPPKN--------WINDPNGVMIYKGIYHLFYQYNPKGA-------------VWGNIVWAHSTSKDLIN 99 (428)
Q Consensus 41 ~~~~~Rp~~H~~p~~g--------w~nDPng~~~~~G~YHlFYq~~p~~~-------------~~g~~~Wgha~S~Dlv~ 99 (428)
.+..++++||+.|..| |+||||++++++|+||||||++|... .|+.++|+||+|+||+|
T Consensus 25 ~~g~~f~~~~~~P~~g~~~~~e~~~~~DP~~v~~~dG~Yymfyt~~~~~~~G~~~~~~~~~~~~w~~~~i~~a~S~DLv~ 104 (374)
T 3r4z_A 25 KGPEWLFEFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKIT 104 (374)
T ss_dssp SCSTTCEEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSCSCTTSCSSTTTTCEEEEEEESSSSE
T ss_pred CCCchHHhcccccccCCccccCCcCcCCCCeEEEECCEEEEEEEcCCCcccccccccccccccccCccEEEEEECCCCcC
Confidence 5678999999999999 99999999999999999999986421 35788999999999999
Q ss_pred CccCCCCCCCCC--CccCCCeEeeeEEEcCCCceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceecC
Q 014220 100 WIPHDPAIYPSQ--QSDINGCWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAP 173 (428)
Q Consensus 100 W~~~~~al~P~~--~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~ 173 (428)
|++++++|.|.. .||..+||+|+++. .+|+++||||+.... ..+.+++|+|+|.. ..|++. ++||+.+
T Consensus 105 W~~~g~~l~~~~~~~~d~~gvwaPsvi~-~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~----Gpw~~~-~~Pvi~~ 178 (374)
T 3r4z_A 105 WKEIGPAIQRGAAGAYDDRAVFTPEVLR-HNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPF----GPWTKS-DAPILSP 178 (374)
T ss_dssp EEEEEEEECCCCTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCBEEEEEEESSTT----CCCEEC-SSCSBCC
T ss_pred cEeCcccCCCCCCCCccCCCEECCEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEECCCC----CCeEEC-CCCEeCC
Confidence 999999998863 68889999999987 499999999997542 34789999998863 579996 6899865
Q ss_pred CCC----------------CCCCCCCccCCeEEEECCCCeEEEEEeeecCC-----c---cEEEEEEeCCCC-CcEEc-c
Q 014220 174 DAM----------------NQINTSSFRDPTTAWLGPDKRWRVIIGSKINR-----K---GLAILYRSKDFV-HWIKA-K 227 (428)
Q Consensus 174 ~~~----------------~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~-----~---G~i~ly~S~Dl~-~W~~~-~ 227 (428)
... ..++...++||.|+ + .+|+|||++++...+ . -++.+++|+++. .|+.. +
T Consensus 179 ~~~~~w~~ddd~~~~~~~~~~~d~~~~~~P~v~-~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~Gpw~~~~~ 256 (374)
T 3r4z_A 179 ENDGVWDTDEDNRFLVKEKGSFDSHKVHDPCLM-F-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKSEY 256 (374)
T ss_dssp CCCSEECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTTCCCEECTT
T ss_pred CcCCceeecCCceEEEecCCccccCccccceEE-E-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCCCCCEECCC
Confidence 310 11233457999965 4 489999999877421 1 268899998854 69875 3
Q ss_pred cccccCCCCCeeecCceEEec
Q 014220 228 HPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 228 ~~l~~~~~~~~wECPdlf~l~ 248 (428)
+|+.... .=|.+|+.+
T Consensus 257 ~Pi~~~~-----~dp~V~~~~ 272 (374)
T 3r4z_A 257 NPITNSG-----HEVAVWPYK 272 (374)
T ss_dssp CCCCSSC-----SSCCEEEET
T ss_pred CCEeCCC-----CCCceEEeC
Confidence 4555421 135677765
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.3e-25 Score=223.37 Aligned_cols=196 Identities=16% Similarity=0.232 Sum_probs=148.4
Q ss_pred CCCCCCCccc-cccCCCC--------CccCCcceEEECCEEEEEEeeCCC-------------CCCCCCcEEEEEEeCCC
Q 014220 40 SPNQPYRTGY-HFQPPKN--------WINDPNGVMIYKGIYHLFYQYNPK-------------GAVWGNIVWAHSTSKDL 97 (428)
Q Consensus 40 ~~~~~~Rp~~-H~~p~~g--------w~nDPng~~~~~G~YHlFYq~~p~-------------~~~~g~~~Wgha~S~Dl 97 (428)
..+++|||.| |++|+.| ++|||+++++++|+||||||+.|. ...|+.++|+||+|+||
T Consensus 68 ~~~~~~~~~~~~~~p~~g~~~~~~~v~~~DP~~vi~~dG~Yylfyt~~~~~~~G~~~~~~~~~~~p~~~~~i~~A~S~Dl 147 (408)
T 3p2n_A 68 DLGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWYATSEDG 147 (408)
T ss_dssp TCCSTTCEEECCCEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSS
T ss_pred ccCCchhhcccccCCcCCCccccCCcEeCCCCEEEEECCEEEEEEEeCCCcccccccccccccccccccceEEEEEcCCC
Confidence 4689999999 9999999 999999999999999999998762 11356789999999999
Q ss_pred CCCccCCCCCCCCC--CccCCCeEeeeEEEcCCCceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCcee
Q 014220 98 INWIPHDPAIYPSQ--QSDINGCWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLM 171 (428)
Q Consensus 98 v~W~~~~~al~P~~--~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi 171 (428)
+||++.+++|.|.. .||..++|+++++. .+|+++||||++... ....+++|++.+. ++. |++. ++||+
T Consensus 148 v~W~~~g~~l~~~~~~~wd~~gv~aPsVi~-~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~---DG~-W~~~-~~pli 221 (408)
T 3p2n_A 148 WTWKEEGPAVTRGEKGAYDDRSVFTVEIMK-WEDKYYLCYQTVKSPYNVRVKNQVGLAWADSP---DGP-WTKS-EEPIL 221 (408)
T ss_dssp SEEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCCEEEEEEESST---TCC-CEEC-SSCSB
T ss_pred CeeeEeCceeCCCCCCCcccCceEeeEEEE-ECCEEEEEEEeecCCCCCcCCCceEEEEEECC---CCC-EEEC-Cccee
Confidence 99999999998864 68889999999987 599999999996421 1345677766543 235 9997 57887
Q ss_pred cCCC----------------CCCCCCCCccCCeEEEECCCCeEEEEEeeecCC--------ccEEEEEEeCCCC-CcEEc
Q 014220 172 APDA----------------MNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR--------KGLAILYRSKDFV-HWIKA 226 (428)
Q Consensus 172 ~~~~----------------~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~--------~G~i~ly~S~Dl~-~W~~~ 226 (428)
.+.. ...++...+++|.|+. .+|+|||++++...+ .-++.+++|+|+. .|+..
T Consensus 222 ~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~~--~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~Gpw~k~ 299 (408)
T 3p2n_A 222 SPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCIIP--YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKS 299 (408)
T ss_dssp CCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEEE--ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEEC
T ss_pred CCCCCceEEEecCCcccccccceecCCCeEcceEEE--ECCEEEEEEEcccCccccccCCCccEEEEEEECCCCCCcEEC
Confidence 5420 1234455689999764 478999999886421 2468899999987 89985
Q ss_pred c-cccccCCCCCeeecCceEEec
Q 014220 227 K-HPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 227 ~-~~l~~~~~~~~wECPdlf~l~ 248 (428)
. +|+.... .| |.+|+-+
T Consensus 300 ~~nPVl~~~----~d-p~Vw~~~ 317 (408)
T 3p2n_A 300 PYNPISNSG----HE-ICVWPYN 317 (408)
T ss_dssp TTCCSCSSC----SS-CCEEEET
T ss_pred CCCCcccCC----CC-CeeEecC
Confidence 3 4555322 12 6666554
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=227.55 Aligned_cols=204 Identities=17% Similarity=0.236 Sum_probs=143.1
Q ss_pred cCCCCCcc------CCcc-eEEECCEEEEEEeeCCCCC--CCCC----cEEEEEEeCC---------CCCCccCCCCCCC
Q 014220 52 QPPKNWIN------DPNG-VMIYKGIYHLFYQYNPKGA--VWGN----IVWAHSTSKD---------LINWIPHDPAIYP 109 (428)
Q Consensus 52 ~p~~gw~n------DPng-~~~~~G~YHlFYq~~p~~~--~~g~----~~Wgha~S~D---------lv~W~~~~~al~P 109 (428)
+.+..|++ ||+| ++.++|.+|||||..|... .++. .++||++|+| |+||++.+.+|.+
T Consensus 66 ~~~d~wVWDsWPl~D~dg~~v~~~G~~~vF~L~a~r~~~~~~~drH~~a~I~~~yskdg~~~~~~~~l~~W~~~G~vf~~ 145 (493)
T 1w18_A 66 INPDVWVWDTWTLIDKHADQFSYNGWEVIFCLTADPNAGYGFDDRHVHARIGFFYRRAGIPASRRPVNGGWTYGGHLFPD 145 (493)
T ss_dssp SCTTCEEEEEEEEECTTCCBEEETTEEEEEEEEECTTSSCCGGGCGGGCEEEEEEEESSCCGGGSCTTCCCEEEEESSCT
T ss_pred ccCCcceEcCeeEECCCCCEEEECCeEEEEEEecCCccCCCccCCCccceeeeEEecCccccccccccCCceECCccccC
Confidence 34778865 5566 5567889999999998754 3443 4556999999 8999999998866
Q ss_pred CCC--------ccCCCeEeeeEEEc--CCCceEEEEcccCC----CC----cceEEEEEEc-----CCCCCccceeEecC
Q 014220 110 SQQ--------SDINGCWSGSATIL--PGEKPAIFYTGIDP----HN----RQVQNLAVPK-----NLSDPYLREWVKSP 166 (428)
Q Consensus 110 ~~~--------~D~~gv~SGsav~~--~dg~~~l~YTg~~~----~~----~~~q~lA~S~-----D~~d~~l~~w~k~~ 166 (428)
+.. ++..++|||||++. .||+++||||++.. ++ ...|+||.+. +..+..+.+|+|.
T Consensus 146 g~~~~~~~~~~~d~~~~WSGSAi~~~~~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~- 224 (493)
T 1w18_A 146 GASAQVYAGQTYTNQAEWSGSSRLMQIHGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAH- 224 (493)
T ss_dssp TGGGGGSTTSCCSEEEEEEEEEEESSTTSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEE-
T ss_pred CCccccccccccCcCCeEcCceEEeccCCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccC-
Confidence 533 45679999999985 69999999999853 11 1247776432 2112235788875
Q ss_pred CCceecCCC--C---CCCCCCCccCCeEEEECC--CCeEEEEEeeecC--------------------------------
Q 014220 167 KNPLMAPDA--M---NQINTSSFRDPTTAWLGP--DKRWRVIIGSKIN-------------------------------- 207 (428)
Q Consensus 167 ~nPvi~~~~--~---~~~~~~~~RDP~V~~~~~--~g~y~Mv~ga~~~-------------------------------- 207 (428)
.+|+.++. + +.....+||||+|+ .++ +|++||+++++..
T Consensus 225 -~~l~~~DG~~Yqt~~q~~~~~fRDP~vf-~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 302 (493)
T 1w18_A 225 -TPLLQPDGVLYQNGAQNEFFNFRDPFTF-EDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSG 302 (493)
T ss_dssp -EEEECCCSSSBCCTTTCTTCCCEEEEEE-ECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTT
T ss_pred -CceeecCccccccccccCCccccCCEEE-ecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhccccc
Confidence 46775431 0 11124689999965 444 3999999998752
Q ss_pred ---CccEEEEEEe--CCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 208 ---RKGLAILYRS--KDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 208 ---~~G~i~ly~S--~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
..|+|.|+++ +|+.+|+....++.......++|||++|+++ | ||+|++|..
T Consensus 303 a~~~~g~IGLa~~~s~Dl~~We~~~PL~~a~~v~deiErP~V~~~~--G-------------kyYLFtSs~ 358 (493)
T 1w18_A 303 AYYQKANIGLAIATDSTLSKWKFLSPLISANCVNDQTERPQVYLHN--G-------------KYYIFTISH 358 (493)
T ss_dssp GGGCCEEEEEEEESSTTSCCEEEEEEEEECTTTBSCCEEEEEEEET--T-------------EEEEEEEEC
T ss_pred chhccceEEEEEeCCCCCccceecCccccCCCCCCcEECCeEEEEC--C-------------EEEEEEEcc
Confidence 1467866655 6899999875333444455799999999998 6 888888754
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-24 Score=218.69 Aligned_cols=196 Identities=14% Similarity=0.254 Sum_probs=148.4
Q ss_pred CCCCCCCccccccCCCC-------Cc-cCCcceEEECCEEEEEEeeCCCCC-------------CCCCcEEEEEEeCCCC
Q 014220 40 SPNQPYRTGYHFQPPKN-------WI-NDPNGVMIYKGIYHLFYQYNPKGA-------------VWGNIVWAHSTSKDLI 98 (428)
Q Consensus 40 ~~~~~~Rp~~H~~p~~g-------w~-nDPng~~~~~G~YHlFYq~~p~~~-------------~~g~~~Wgha~S~Dlv 98 (428)
....+++++||..|..| |+ ||||++++++|+||||||++|... .|+.++|+||+|+||+
T Consensus 64 ~~~~~~f~r~~~~Pi~g~~~~~~g~~~~DP~~v~~~dG~yymfY~~~~~~~~G~~~~~~~~~~~~~~~~~i~~a~S~Dlv 143 (404)
T 4ak5_A 64 NHDNKWFFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGL 143 (404)
T ss_dssp CCCSTTCCEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSSS
T ss_pred CCCCchhhhcccccccCCcccccceeecCCcEEEEECCEEEEEEEeCCCcccccccccccccccccCccEEEEEECCCCC
Confidence 35678888888666665 87 999999999999999999988411 2667899999999999
Q ss_pred CCccCCCCCCCC--CCccCCCeEeeeEEEcCCCceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceec
Q 014220 99 NWIPHDPAIYPS--QQSDINGCWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMA 172 (428)
Q Consensus 99 ~W~~~~~al~P~--~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~ 172 (428)
||++++.+|.|. ..||..+||+++++. .+|+++|+||+.... ..+.+++|+|++.. ..|++. ++||+.
T Consensus 144 ~W~~~g~~L~~~~~~~wd~~gv~aP~Vi~-~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~----Gpwt~~-~~Pvl~ 217 (404)
T 4ak5_A 144 TWKEQGIAVKRGEKGAYDDRSVFTPEVME-WKGKYYLCYQAVKSPYTVRVKNTIGMACADSPE----GLWTKT-DKPVLE 217 (404)
T ss_dssp EEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSCCCTTCCCEEEEEEESSTT----CCCEEC-SSCSBC
T ss_pred CceeCceEeecCCCCccccCCEEeeEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEEeCCC----CCceEC-CCceec
Confidence 999999999885 478899999999987 599999999997542 34678999998643 369995 689986
Q ss_pred CCCC----------------CCCCCCCccCCeEEEECCCCeEEEEEeeecCC--------ccEEEEEEeCCCC-CcEEcc
Q 014220 173 PDAM----------------NQINTSSFRDPTTAWLGPDKRWRVIIGSKINR--------KGLAILYRSKDFV-HWIKAK 227 (428)
Q Consensus 173 ~~~~----------------~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~--------~G~i~ly~S~Dl~-~W~~~~ 227 (428)
+... ..++...++||.|+. .+|+|||++.+...+ .-++.+++|+|+. .|+...
T Consensus 218 ~~~~~~W~~ddd~~~~~~~~~~wD~~~~~~P~v~~--~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~Gpw~k~~ 295 (404)
T 4ak5_A 218 PSDTGEWEGDEDNRFKVVSKGDFDSHKVHDPCIIP--YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPMGPYVKSE 295 (404)
T ss_dssp CCSCCEECSSSSCTTCEEECCSTTSSEEEEEEEEE--ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEECT
T ss_pred CCCCcceeeccCceeeeccCCcccCCcEECCEEEE--ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCCCCcEECC
Confidence 5410 112345678999754 478999999876421 2378999999987 798753
Q ss_pred -cccccCCCCCeeecCceEEec
Q 014220 228 -HPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 228 -~~l~~~~~~~~wECPdlf~l~ 248 (428)
+|+.... .|+ .+|+-+
T Consensus 296 ~nPv~~~~----~e~-~Vw~~~ 312 (404)
T 4ak5_A 296 YNPISNSG----HEV-CVWPYK 312 (404)
T ss_dssp TCCSCSSC----SSC-CEEEET
T ss_pred CCceecCC----Ccc-eEEEeC
Confidence 4655321 344 556554
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=209.68 Aligned_cols=188 Identities=16% Similarity=0.213 Sum_probs=144.9
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccC-CCCCCCC--CCccCCCe-EeeeEEEcCCCce
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH-DPAIYPS--QQSDINGC-WSGSATILPGEKP 131 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~-~~al~P~--~~~D~~gv-~SGsav~~~dg~~ 131 (428)
|.+| +++++++|+||||||.++. ++.++|+||+|+|++||++. +++|.|+ ..++..|| |+++++.. +|++
T Consensus 55 gv~n--~~~i~~~g~~~lfY~~~~~---~~~~~~~~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~g~~yDP~v~~~-~d~y 128 (338)
T 1vkd_A 55 RVFN--SAVVPYNGEFVGVFRIDHK---NTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTY 128 (338)
T ss_dssp EEEE--EEEEEETTEEEEEEEEEET---TSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTEE
T ss_pred eEEc--cEEEEECCEEEEEEEEECC---CCcEEEEEEEeCCCCccEECCCCEEeCCCCCccccCCEEeCcEEEEE-CCEE
Confidence 4445 4788999999999999974 45689999999999999987 5788887 66788999 89999874 8899
Q ss_pred EEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECC-CCeEEEEEeeec---C
Q 014220 132 AIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP-DKRWRVIIGSKI---N 207 (428)
Q Consensus 132 ~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~-~g~y~Mv~ga~~---~ 207 (428)
+|+||+ .. ..+.+++|.|+|. .+|++.. +++ .+ ..|||. +|.+. +|+|+|+++.+. .
T Consensus 129 ym~yt~-~~-~~~~i~la~S~Dl-----~~W~~~~--~i~-~~--------~~rd~~-~fp~~i~Gky~m~~~~q~~~~~ 189 (338)
T 1vkd_A 129 YITFCT-DD-HGPTIGVGMTKDF-----KTFVRLP--NAY-VP--------FNRNGV-LFPRKINGKYVMLNRPSDNGHT 189 (338)
T ss_dssp EEEEEE-ES-SSEEEEEEEESSS-----SSEEEEC--CSS-SS--------SEEEEE-ECSSCBTTBEEEEEEECCSSSC
T ss_pred EEEEEE-cC-CcceEEEEEECCC-----CeEEECC--ccC-CC--------cCCceE-EEEEEECCEEEEEEEecCCCCC
Confidence 999999 64 5678999999874 7999852 443 12 358997 56533 899999997754 3
Q ss_pred CccEEEEEEeCCCCCcEEcccccccCCCCCeee------cCceEEeccCCCCCccccCCCCCceeEEEEeeCC--CCeee
Q 014220 208 RKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWE------CPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD--TKHEY 279 (428)
Q Consensus 208 ~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wE------CPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~--~~~~~ 279 (428)
+.+.|.+++|+||.+|+..+ ++..+..+.||| ||+.|+++ + .|+|+++... .....
T Consensus 190 ~~~~I~~a~S~Dl~~W~~~~-~l~~~~~~~~wE~~~ig~gp~~i~~~--~-------------gwll~y~G~~~~~~~~~ 253 (338)
T 1vkd_A 190 PFGDIFLSESPDMIHWGNHR-FVLGRSSYNWWENLKIGAGPYPIETS--E-------------GWLLIYHGVTLTCNGYV 253 (338)
T ss_dssp SCCCEEEEEESSSSCBEEEE-EEECCCSSCGGGSSEEEECSCCEEET--T-------------EEEEEEEEEEEETTEEE
T ss_pred CCcEEEEEEcCCcccCCcCc-eEEcCCCCCCcccCccccCCCcEEeC--C-------------cEEEEEecccCCCCCcE
Confidence 56889999999999999765 454443344899 79999986 3 5888776432 12456
Q ss_pred EEEEE
Q 014220 280 YTVGT 284 (428)
Q Consensus 280 Y~vG~ 284 (428)
|.+|-
T Consensus 254 Y~~G~ 258 (338)
T 1vkd_A 254 YSFGA 258 (338)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88887
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-23 Score=202.69 Aligned_cols=189 Identities=15% Similarity=0.198 Sum_probs=144.3
Q ss_pred CCccCCcceEEEC--CEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC--CccCCCeEeeeEEEcC---C
Q 014220 56 NWINDPNGVMIYK--GIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ--QSDINGCWSGSATILP---G 128 (428)
Q Consensus 56 gw~nDPng~~~~~--G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~--~~D~~gv~SGsav~~~---d 128 (428)
|+++||+ +++.+ |+||||++..+. +.|+.++|.|++|+||+||+..+.+|.+.. .|+..++|+++++..+ +
T Consensus 13 g~~~DP~-i~~~~~dg~yyl~~t~~~~-~~~~~~~~~~~~S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~v~~~~~~~~ 90 (311)
T 3qz4_A 13 GFHADPE-VLYSHQTKRYYIYPTSDGF-PGWGGSYFKVFSSKNLKTWKEETVILEMGKNVSWANGNAWAPCIEEKKIDGK 90 (311)
T ss_dssp SSEEEEE-EEEETTTTEEEEEEEECSS-GGGCCCEECCEEESSSSSCEECCCCEEBTTTBTTEEEEEEEEEEEEEEETTE
T ss_pred CCcCCce-EEEECCCCEEEEEEecCCC-CCCCCcEEEEEECCCCCCcEECceecccccCCCcccCCcCCCeeEEeeecCC
Confidence 7899998 88887 999999997665 457778899999999999999999997764 5667899999998743 8
Q ss_pred CceEEEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECC-CCeEEEEEeeec
Q 014220 129 EKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP-DKRWRVIIGSKI 206 (428)
Q Consensus 129 g~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~-~g~y~Mv~ga~~ 206 (428)
|+++||||+.... ..+.+++|+|+|.. ..|++. ++||+... +. ...+++||.|+ .++ +|++||++|+
T Consensus 91 Gkyylyyt~~~~~~~~~~i~va~s~~p~----Gpw~~~-~~p~~~~~--~~-g~~~~iDp~vf-~dd~dG~~yl~~g~-- 159 (311)
T 3qz4_A 91 YKYFFYYSANPTTNKGKQIGVAVADSPT----GPFTDL-GKPIITSS--PT-GRGQQIDVDVF-TDPVSGKSYLYWGN-- 159 (311)
T ss_dssp EEEEEEEEEEETTCSSCEEEEEEESSTT----CCCEEC-SSCSBCSC--TT-SSSBSCCCEEE-ECTTTCCEEEEECB--
T ss_pred CEEEEEEEeccCCCCCeeEEEEEECCCC----CCceEC-CcceEcCC--CC-CCcccccccEE-EECCCCcEEEEEcC--
Confidence 9999999997542 35788999998763 479984 67888543 21 13578999965 545 8999999986
Q ss_pred CCccEEEEEE-eCCCCCcEEcccccccCC-----CCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCC
Q 014220 207 NRKGLAILYR-SKDFVHWIKAKHPLHSVK-----GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT 275 (428)
Q Consensus 207 ~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~-----~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~ 275 (428)
+.|.+.+ |+|+.+|......+..+. ...+.|||.+|+.+ | +++|++|....
T Consensus 160 ---~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~ 216 (311)
T 3qz4_A 160 ---GYMAGAELNDDMLSIKEETTVVLTPKGGTLQTYAYREAPYVIYRK--G-------------IYYFFWSVDDT 216 (311)
T ss_dssp ---SSCEEEEBCTTSSSBCGGGCEECCCCCCCTTTTCCCEEEEEEEET--T-------------EEEEEEEESCT
T ss_pred ---CCEEEEEeCCcccccCCCceEEeCCCCCcccccceeeccEEEEEC--C-------------EEEEEEEcCCC
Confidence 3456666 889888864322233221 12479999999997 5 88898887643
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-21 Score=195.33 Aligned_cols=154 Identities=19% Similarity=0.326 Sum_probs=116.1
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCC---CCCcEEEEEEeCCCCCCccC-CCCCCCCCCccC-----CCeEeeeEEEcCC
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAV---WGNIVWAHSTSKDLINWIPH-DPAIYPSQQSDI-----NGCWSGSATILPG 128 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~---~g~~~Wgha~S~Dlv~W~~~-~~al~P~~~~D~-----~gv~SGsav~~~d 128 (428)
+-.| ++++++|+||||||.++.... ++.++||||+|+|++||++. .++|.|+..+++ .||++++++..+|
T Consensus 53 vfnp-~ai~~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DGi~w~~~~~Pvl~P~~~~~~~~e~~~gv~DP~v~~~ed 131 (364)
T 3qc2_A 53 TFNP-AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGGCEDPRIAVTDD 131 (364)
T ss_dssp EEEE-EEEEETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTT
T ss_pred eECc-eEEEECCEEEEEEEEECCCCcccCCCceEEEEEEeCCCceeeEcCcCeEcCCCccccccccCCcEECCEEEEeCC
Confidence 3445 678899999999999987543 36799999999999999985 478999876653 7999999987558
Q ss_pred CceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEE--------E-ECCCCeEE
Q 014220 129 EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTA--------W-LGPDKRWR 199 (428)
Q Consensus 129 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~--------~-~~~~g~y~ 199 (428)
|+++|+||+... ....+++|+|+|. ++|+|.. +++.+.....+.....+|+.|+ + ...+|+|+
T Consensus 132 G~yym~Yta~~~-~~~~i~lA~S~Dl-----~~W~k~g--~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~ki~GkY~ 203 (364)
T 3qc2_A 132 GLYVMMYTQWNR-HVPRLAVATSRNL-----KDWTKHG--PAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYF 203 (364)
T ss_dssp SCEEEEEEEECS-SCEEEEEEEESSS-----SSCEEEE--ETTSSHHHHTTTTCCCCCEEEEEEEETTEEEECEETTEEE
T ss_pred CEEEEEEEecCC-CCeEEEEEEECCC-----CEEEEee--eccCccccccccccccccceeeeeccccceeeEEECCEEE
Confidence 999999999753 4678999999884 8999963 5553310000112234666542 1 12589999
Q ss_pred EEEeeecCCccEEEEEEeCCCCCcEE
Q 014220 200 VIIGSKINRKGLAILYRSKDFVHWIK 225 (428)
Q Consensus 200 Mv~ga~~~~~G~i~ly~S~Dl~~W~~ 225 (428)
|+++. +.|.+++|+||++|+.
T Consensus 204 M~~g~-----~~I~la~S~Dl~~W~~ 224 (364)
T 3qc2_A 204 MYWGE-----EHVFAATSDDLIHWTP 224 (364)
T ss_dssp EEECS-----SSBEEEEESSSSSEEE
T ss_pred EEEcC-----CeEEEEeCCCcccceE
Confidence 99862 5688999999999987
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.5e-21 Score=188.27 Aligned_cols=201 Identities=14% Similarity=0.148 Sum_probs=145.7
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCC---CCCCCcEEEEEEeCCCCCCccCCCCCCCC-CCccCCCeEeeeEEEcCCCce
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKG---AVWGNIVWAHSTSKDLINWIPHDPAIYPS-QQSDINGCWSGSATILPGEKP 131 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~---~~~g~~~Wgha~S~Dlv~W~~~~~al~P~-~~~D~~gv~SGsav~~~dg~~ 131 (428)
.+.+||+. +.++|+||||+++.+.. +.+....|.+++|+||+||+..+.+|.+. ..|+..++|+++++. .+|++
T Consensus 10 ~~~~DP~i-~~~~g~yYl~~t~~~~~~~~~~~~~~~~~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~WAP~i~~-~~Gky 87 (307)
T 3qee_A 10 VFTADPAA-LVHKGRVYLYAGRDEAPDNTTFFVMNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWASQVIE-RNGKF 87 (307)
T ss_dssp SEEEEEEE-EEETTEEEEEEEEECCSSSSSCCCEEEEEEEEESSSSSCEEEEEEEEGGGSTTEEEEEEEEEEEE-ETTEE
T ss_pred CccCCCce-EEECCEEEEEEccCcccCCccccccCcEEEEECCCCCCceECccccccCCCCcccCCccCceEEE-ECCEE
Confidence 35699985 56899999999988753 35567899999999999999999988764 456778999999987 69999
Q ss_pred EEEEcccCCCC--cceEEEEEEcCCCCCccceeEecCCCceecCCCCC-CCCCCCccCCeEEEECCCCeEEEEEeeecCC
Q 014220 132 AIFYTGIDPHN--RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN-QINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (428)
Q Consensus 132 ~l~YTg~~~~~--~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~-~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~ 208 (428)
+||||+...+. .+.+++|+|++.. ..|++..++|++.....+ .....+.+||.| |.+++|++||++|+.
T Consensus 88 ylyyt~~~~~~~~~~~i~va~s~~p~----Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~v-f~DddG~~Yl~~g~~--- 159 (307)
T 3qee_A 88 YWYVTVRHDDTKPGFAIGVAVGDSPI----GPFKDALGKALITNDMTTDTPIDWDDIDPSV-FIDDDGQAYLFWGNT--- 159 (307)
T ss_dssp EEEEEEEECTTSCSEEEEEEEESSTT----CCCEESSSSCSBCGGGCCSSCCSCCSCCCEE-EECTTSCEEEEECSS---
T ss_pred EEEEEeccCCCCCceEEEEEEECCCC----CCCEeCCCCeeEecCccccCCCCcCcccCce-EECCCCCEEEEEeCC---
Confidence 99999875432 4678999998753 479985467888532000 011235799996 455789999999875
Q ss_pred ccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCeeeEEEEE
Q 014220 209 KGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGT 284 (428)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~~Y~vG~ 284 (428)
+...+--|+|+.+|.-....+. ....++|||.+|+.+ | +++|++|........|...+
T Consensus 160 -~i~~~~l~~d~~~~~g~~~~i~--~~~~~~EgP~i~k~~--g-------------~YyL~~s~~~~~~~~~~~s~ 217 (307)
T 3qee_A 160 -RPRYAKLKKNMVELDGPIRAIE--GLPEFTEAIWVHKYQ--D-------------NYYLSYAMGFPEKIGYAMGK 217 (307)
T ss_dssp -SCEEEEECTTSSSEEEEEEECC--CCTTEEEEEEEEECC----------------CEEEEEEETTTTEEEEEEES
T ss_pred -cEEEEEECCccccccCceEEeC--CCCCccCceEEEEEC--C-------------EEEEEEECCCCcEEEEEECC
Confidence 2222333889999874322222 235689999999987 5 88888887655555566553
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.7e-19 Score=173.69 Aligned_cols=183 Identities=16% Similarity=0.146 Sum_probs=131.9
Q ss_pred CccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCcc-------CCCeEeeeEEEcCCC
Q 014220 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD-------INGCWSGSATILPGE 129 (428)
Q Consensus 57 w~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D-------~~gv~SGsav~~~dg 129 (428)
.++||+ +++++|+||||++..+. ...|.+++|+||+||+..+.+|.+...|+ ..++|+++++. .+|
T Consensus 11 ~~~DP~-i~~~~g~yYl~~t~~~~-----~~~i~i~~S~DLv~W~~~g~~l~~~~~w~~~~~~~~~~~~wAP~v~~-~~G 83 (293)
T 1uv4_A 11 LLHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNG 83 (293)
T ss_dssp ECSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETT
T ss_pred cCCCCe-EEEECCEEEEEEcCCCC-----CCceEEEECCCCCCccCCCccCCCCCcccccccccCCCceecceEEE-ECC
Confidence 578997 55679999999998653 34799999999999999998888765553 36899999987 599
Q ss_pred ceEEEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCC
Q 014220 130 KPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (428)
Q Consensus 130 ~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~ 208 (428)
+++||||+.... ..+.+++|+|+|... ..|++. .+++..+ +. ...+.+||.|+ .+++|++||++++..
T Consensus 84 ~yylyyt~~~~~~~~~~i~va~s~~p~~---Gpw~~~--~~~l~~~--~~-~~~~~iDp~vf-~d~dG~~Yl~~g~~~-- 152 (293)
T 1uv4_A 84 KYWLYYSVSSFGSNTSAIGLASSTSISS---GGWKDE--GLVIRST--SS-NNYNAIDPELT-FDKDGNPWLAFGSFW-- 152 (293)
T ss_dssp EEEEEEEECCTTCSCEEEEEEEESCTTT---TCCEEE--EEEEEEC--TT-SSSCCCSCEEE-ECTTSCEEEEECBST--
T ss_pred EEEEEEEecCCCCCcceEEEEECCCCCC---CCCccC--CccEecC--CC-CCCCCCCCCeE-ECCCCCEEEEEEecC--
Confidence 999999987542 456788999987520 269875 3445332 11 23468999965 457899999998642
Q ss_pred ccEEEEEE-eCCCCCcEEcccccc-cCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 209 KGLAILYR-SKDFVHWIKAKHPLH-SVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 209 ~G~i~ly~-S~Dl~~W~~~~~~l~-~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
+.|.+++ ++|+..+.-....+. .+....++|||.+|+.+ | +++|++|..
T Consensus 153 -~~i~~~~l~~d~~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~yyL~~s~~ 203 (293)
T 1uv4_A 153 -SGIKLTKLDKSTMKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFD 203 (293)
T ss_dssp -TCEEEEEECTTTCSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEE
T ss_pred -CCEEEEEECchhCccCCcceEEeecCCCCCccCccEEEEEC--C-------------EEEEEEEeC
Confidence 3356666 567766542211222 22345689999999997 5 888888864
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=181.89 Aligned_cols=149 Identities=18% Similarity=0.302 Sum_probs=113.0
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCC---CCCcEEEEEEeCCCCCCccC-CCCCCCCCCcc-----CCCeEeeeEEEcCC
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAV---WGNIVWAHSTSKDLINWIPH-DPAIYPSQQSD-----INGCWSGSATILPG 128 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~---~g~~~Wgha~S~Dlv~W~~~-~~al~P~~~~D-----~~gv~SGsav~~~d 128 (428)
+-+| ++++++|+|||||+.++.... .+.++|+||+|+|++||++. .++|.|+..++ ..+|++++++..+|
T Consensus 50 v~sg-sai~~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~~~~~~~DP~v~~~~d 128 (356)
T 3taw_A 50 TFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENECPGGTEDPRIAMTED 128 (356)
T ss_dssp EEEE-EEEEETTEEEEEEEEECSSSCSTTSSCEEECCEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTT
T ss_pred eECc-EEEEECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCCccceECCcceecCCCccccccccCCceECCEEEEECC
Confidence 4455 577899999999999987542 35789999999999999984 57888886543 47999999987558
Q ss_pred CceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCcc-----CCeE----------EEEC
Q 014220 129 EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFR-----DPTT----------AWLG 193 (428)
Q Consensus 129 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~R-----DP~V----------~~~~ 193 (428)
|+++|+||+.. .....+++|.|+|. .+|++. ++++.+. . ..+|| |..+ +++
T Consensus 129 g~y~m~yt~~~-~~~~~i~la~S~Dl-----~~W~~~--g~i~~~~--~---~~~~~~~~~k~~~l~p~~~~g~p~v~k- 194 (356)
T 3taw_A 129 GTYVLLYTQWN-RKVPRLAVATSKDL-----KHWTKF--GPAFEKA--Y---NGKFKDEATKSASLVTTLKGDKQVIAK- 194 (356)
T ss_dssp SCEEEEEEEEC-SSCEEEEEEEESSS-----SSCEEE--EETTSSH--H---HHTTTTSCCCCEEEEEEEETTEEEECC-
T ss_pred CEEEEEEEEeC-CCCceEEEEECCCC-----CCceEe--eeEcCCc--c---ccccccccCCccEEeecccCCCceEEE-
Confidence 99999999975 34578899999884 899986 3565432 1 12233 3221 233
Q ss_pred CCCeEEEEEeeecCCccEEEEEEeCCCCCcEEc
Q 014220 194 PDKRWRVIIGSKINRKGLAILYRSKDFVHWIKA 226 (428)
Q Consensus 194 ~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~ 226 (428)
.+|+|+|+++. +.|.+++|+||.+|+..
T Consensus 195 ~~G~y~m~~g~-----~~I~la~S~Dl~~W~~~ 222 (356)
T 3taw_A 195 VNGKYFMYWGE-----KNVYAATSDNLIDWDPL 222 (356)
T ss_dssp BTTBEEEEECS-----SSBEEEEESSSSSCEEC
T ss_pred ECCEEEEEeCC-----ceeeEEECCCcccCeec
Confidence 68999999972 46899999999999974
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-19 Score=177.44 Aligned_cols=182 Identities=18% Similarity=0.155 Sum_probs=130.8
Q ss_pred CccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCcc-------CCCeEeeeEEEcCCC
Q 014220 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD-------INGCWSGSATILPGE 129 (428)
Q Consensus 57 w~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D-------~~gv~SGsav~~~dg 129 (428)
+++||+. ++++|+||||++. ..|.+++|+||+||+..+.+|.+...|+ ..++|+++++. .+|
T Consensus 6 ~~~DP~i-~~~~g~yyl~~t~---------~~i~~~~S~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 74 (318)
T 1gyh_A 6 DVHDPVM-TREGDTWYLFSTG---------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKG 74 (318)
T ss_dssp CCSSCEE-EEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETT
T ss_pred ecCCCEE-EEECCEEEEEECC---------CCcEEEECCCCCCccCCCcccCCCcccccccCCCcCcccccCeEEE-ECC
Confidence 6899975 7789999999986 2589999999999999999998876665 47899999987 599
Q ss_pred ceEEEEcccCCC-CcceEEEEEEcCCCCCcc--ceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec
Q 014220 130 KPAIFYTGIDPH-NRQVQNLAVPKNLSDPYL--REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (428)
Q Consensus 130 ~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l--~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~ 206 (428)
+++||||+.... ..+.+++|+|++. ++.. ..|++. ++|+... +.....+++||.|+ .+++|++||++|+..
T Consensus 75 ~~ylyyt~~~~~~~~~~igva~s~~~-dp~gp~~~w~~~--~~v~~~~--~~~~~~~~iDp~vf-~D~dG~~Yl~~g~~~ 148 (318)
T 1gyh_A 75 LFYLYYSVSAFGKNTSAIGVTVNKTL-NPASPDYRWEDK--GIVIESV--PQRDLWNAIAPAII-ADDHGQVWMSFGSFW 148 (318)
T ss_dssp EEEEEEEECCTTSCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEEC--TTTCSSCCCCCEEE-ECTTSCEEEEECBST
T ss_pred EEEEEEEeccCCCCcceEEEEEeCCC-CCCCCCcceecC--CcccccC--CCCCCCCcccCCeE-ECCCCCEEEEeeccC
Confidence 999999987543 4567889998762 1211 129874 4676542 22233568999964 556899999998742
Q ss_pred CCccEEEEEE-eCC------CCCcEEcc---c--cccc-CCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 207 NRKGLAILYR-SKD------FVHWIKAK---H--PLHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 207 ~~~G~i~ly~-S~D------l~~W~~~~---~--~l~~-~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
+.|.+++ ++| +..|+... . .+.. .....++|||.+|+.+ | +++|++|..
T Consensus 149 ---~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yYL~~s~~ 210 (318)
T 1gyh_A 149 ---GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp ---TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred ---CCEEEEEeCCccccccceeecceecccCcceeecccCCCCcceeccEEEEEC--C-------------EEEEEEEeC
Confidence 3466676 455 34676421 0 1111 1235689999999997 5 888888864
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=176.63 Aligned_cols=180 Identities=17% Similarity=0.175 Sum_probs=133.7
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEE-cCCCceEE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI-LPGEKPAI 133 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~-~~dg~~~l 133 (428)
.-...||+ ++.++|+||||++..+. ....|.+++|+||+||+..+.+|.+...++..++|+++++. ..+|+++|
T Consensus 21 ~~~~~DP~-i~~~~g~yyl~~t~~~~----~~~~i~~~~S~DLv~W~~~g~~l~~~~~~~~~~~wAP~v~~~~~~g~~yl 95 (306)
T 3kst_A 21 YLPIADPY-VMFYNNKYYAYGTGGTT----AGEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYL 95 (306)
T ss_dssp SBCCEEEE-EEEETTEEEEEEESCCS----SSSEEEEEEESSSSEEEEEEEEEEGGGSSCSSCCEEEEEEEETTTTEEEE
T ss_pred cccCCCCE-EEEECCEEEEEEecCCc----CCCCEEEEEeCCccccEECceecCCCCcccccccccCeEEEECCCCEEEE
Confidence 34578997 45679999999997653 23479999999999999999888887777778999999864 34899999
Q ss_pred EEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEE
Q 014220 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (428)
Q Consensus 134 ~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ 213 (428)
+||+. +.+++|+|++.. ..|++....|++. ...+||.| |.+++|++||+++...++.+ |.
T Consensus 96 ~yt~~-----~~i~va~s~~p~----Gpw~~~~~~p~~~---------~~~iDp~v-f~D~dG~~Yl~~~~~~~g~~-i~ 155 (306)
T 3kst_A 96 FYSAE-----EHICVATSTTPE----GPFRQEVKQPIWS---------EKSIDTSL-FIDDDGTPYLYFVRFTDGNV-IW 155 (306)
T ss_dssp EEEET-----TEEEEEEESSTT----CCCBCSSCCCSSS---------SCCEEEEE-EECTTSCEEEEEEEESSSEE-EE
T ss_pred EEECC-----CcEEEEEcCCCC----CCcEeCCCccccC---------CCcccceE-EEeCCCCEEEEEEEeCCCCE-EE
Confidence 99985 358899998763 3688754456542 35789996 45578999999986543333 44
Q ss_pred EEE-eCCCCCcEEcccc-cccC------CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 214 LYR-SKDFVHWIKAKHP-LHSV------KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 214 ly~-S~Dl~~W~~~~~~-l~~~------~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
+.+ |+|+.+|...... +... ....++|||.+++.+ | +++|++|...
T Consensus 156 ~~~ls~d~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i~k~~--G-------------~YYL~~S~~~ 209 (306)
T 3kst_A 156 VAQMTDDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKN--G-------------VYYLIYSANH 209 (306)
T ss_dssp EEEBCTTSSCBCGGGCEEEECCCSGGGCSSSSBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred EEEeCcccccccCcceeeeccCCccceecCCCceecceEEEEC--C-------------EEEEEEEeCC
Confidence 544 8999998743211 1111 125689999999997 5 8889988754
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-19 Score=187.68 Aligned_cols=199 Identities=15% Similarity=0.076 Sum_probs=132.5
Q ss_pred cCCcc-eEEECCEEEEEEeeCCCCCC----CCCcEEEEEEe---------CCCCCCccCCCCCCCCC--------CccCC
Q 014220 59 NDPNG-VMIYKGIYHLFYQYNPKGAV----WGNIVWAHSTS---------KDLINWIPHDPAIYPSQ--------QSDIN 116 (428)
Q Consensus 59 nDPng-~~~~~G~YHlFYq~~p~~~~----~g~~~Wgha~S---------~Dlv~W~~~~~al~P~~--------~~D~~ 116 (428)
.|+.| ++-++|..++|++..+.... |....+||..| .|+.+|+..+.++.++. .++..
T Consensus 81 qd~~g~~~~~~Gy~lvf~L~a~~~~~~~drH~~a~iglfy~k~G~~~~~s~d~~~W~~~G~vf~~~~~~~~~~~~~~~~~ 160 (496)
T 3vss_A 81 TDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSHQ 160 (496)
T ss_dssp ECTTCCBEEETTEEEEEEEEEETTSCGGGGGGGCEEEEEEEESSCCTTTSCTTCCCEEEEESSCTTSGGGGCSCTTCSEE
T ss_pred ECCCCCEEEECCEEEEEEEEcCCCCCCCcCcceeEEeeeeccCCcccccCcccCCcEECccccCCCCCcccccCCCccCC
Confidence 44544 44568888899997665433 33567789655 46779999888776542 12333
Q ss_pred CeEeeeEEEcCCCceEEEEcccCC--------CCcceEEEEEEcCC--CCCccceeEecCCCceecCCCC------CCCC
Q 014220 117 GCWSGSATILPGEKPAIFYTGIDP--------HNRQVQNLAVPKNL--SDPYLREWVKSPKNPLMAPDAM------NQIN 180 (428)
Q Consensus 117 gv~SGsav~~~dg~~~l~YTg~~~--------~~~~~q~lA~S~D~--~d~~l~~w~k~~~nPvi~~~~~------~~~~ 180 (428)
.-|||||++.+||+++||||++.. ...+.|+||++... .+.+..+|++...+++|-.++. ....
T Consensus 161 ~eWSGSAi~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~ 240 (496)
T 3vss_A 161 TQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNE 240 (496)
T ss_dssp EEEEEEEEECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCT
T ss_pred ceEecceEECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhcccccc
Confidence 469999998889999999998631 12356777654310 1112367777766666643311 1223
Q ss_pred CCCccCCeEEEEC--CCCeEEEEEeeecC-----------------------------------CccEEEEE--EeCCCC
Q 014220 181 TSSFRDPTTAWLG--PDKRWRVIIGSKIN-----------------------------------RKGLAILY--RSKDFV 221 (428)
Q Consensus 181 ~~~~RDP~V~~~~--~~g~y~Mv~ga~~~-----------------------------------~~G~i~ly--~S~Dl~ 221 (428)
..+||||+| |++ .+|.+||++.+... ..|+|.|+ +|+|+.
T Consensus 241 ~~~fRDP~v-f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~D~~ 319 (496)
T 3vss_A 241 FFNFRDPFT-FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQLT 319 (496)
T ss_dssp TCCCEEEEE-ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESSTTSC
T ss_pred ccccCCCee-EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCCCCC
Confidence 468999996 554 36889999876541 13677665 579999
Q ss_pred CcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 222 HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 222 ~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
.|++.+.++.......|||||++|+++ | ||||+.+..
T Consensus 320 ~We~~~PL~~a~~v~deiErP~vf~~d--G-------------KyYLFt~s~ 356 (496)
T 3vss_A 320 EWEFLPPILSANCVTDQTERPQIYFKD--G-------------KSYLFTISH 356 (496)
T ss_dssp CEEEEEEEEEEETTBSCCEEEEEEEET--T-------------EEEEEEEEC
T ss_pred ccEEeCccccCCCCCCceeCCcEEEEC--C-------------EEEEEEecc
Confidence 999986434333456799999999998 6 889887753
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-18 Score=168.08 Aligned_cols=181 Identities=18% Similarity=0.161 Sum_probs=127.9
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCcc--------CCCeEeeeEEEcC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD--------INGCWSGSATILP 127 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D--------~~gv~SGsav~~~ 127 (428)
.+++||+ +++++|+||||++. ..|.+++|+||+||+..+.+|.+...|+ ..++|+++++. .
T Consensus 22 ~~~~DP~-i~~~~g~yYl~~t~---------~~i~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~v~~-~ 90 (314)
T 3cu9_A 22 LWAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPDICF-Y 90 (314)
T ss_dssp CBCSSCE-EEEETTEEEEEESE---------ETSEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-E
T ss_pred cCcCCCE-EEEECCEEEEEECC---------CCeeEEECcCCCCccCCCcccCCcchhhhccCCCcccCceecCcEEE-E
Confidence 4689997 57889999999986 2589999999999999999988776554 47899999987 4
Q ss_pred CCceEEEEcccCCC-CcceEEEEEEcCCCCCcc--ceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEee
Q 014220 128 GEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYL--REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 128 dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l--~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
+|+++||||+.... ..+.+++|+|++. ++.. .+|++. ++++..+ .. ...+.+||.|+ .+++|++||++++
T Consensus 91 ~g~yylyyt~~~~~~~~~~igva~s~~~-dP~gp~~~w~~~--~~~~~~~--~~-~~~~~iDp~vf-~D~dG~~Yl~~g~ 163 (314)
T 3cu9_A 91 NGIYYLYYSVSTFGKNTSVIGLATNQTL-DPRDPDYEWKDM--GPVIHST--AS-DNYNAIDPNVV-FDQEGQPWLSFGS 163 (314)
T ss_dssp TTEEEEEEEECCTTCCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEEC--TT-SSSCCCSCEEE-ECTTSCEEEEECB
T ss_pred CCEEEEEEEeccCCCCCceEEEEEeCCC-CCCCCCcCcccC--CeEecCC--CC-CCCCccCCCeE-EcCCCCEEEEEec
Confidence 99999999987532 4567889998762 2211 139874 4666433 11 23467999964 5578999999987
Q ss_pred ecCCccEEEEEE-eCCCCC----cEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 205 KINRKGLAILYR-SKDFVH----WIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 205 ~~~~~G~i~ly~-S~Dl~~----W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
.. +.|.+++ ++|... |+.. .+........++|||.+|+.+ | +++|++|..
T Consensus 164 ~~---~~i~~~~l~~d~~~~~~~~~~~-~~~~~~~~~~~~EgP~i~k~~--G-------------~yyL~~s~~ 218 (314)
T 3cu9_A 164 FW---SGIQLIQLDTETMKPAAQAELL-TIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (314)
T ss_dssp ST---TCEEEEECCTTTCSCCTTCCCE-EEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred cC---CcEEEEEECcccCcccCCCceE-EecccCCCCCccCccEEEEEC--C-------------EEEEEEEcC
Confidence 42 2356666 344322 3211 111112235689999999997 5 888888864
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=8e-16 Score=162.02 Aligned_cols=178 Identities=18% Similarity=0.183 Sum_probs=126.4
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCcc------CCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD------INGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D------~~gv~SGsav~~~dg 129 (428)
|++.||+ +++++|+||||++..+. ...|.+++|+||+||+..+.+|.+...++ ..++|+++++. .+|
T Consensus 12 g~~~DP~-i~~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~wAP~i~~-~~g 84 (528)
T 1yrz_A 12 GFHPDPS-IVRVGDDYYIATSTFEW-----FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HDG 84 (528)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCe-EEEECCEEEEEEccCcc-----CCCeEEEECCCccCceECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 6899997 68899999999986532 23589999999999999998887654332 46899999987 699
Q ss_pred ceEEEEcccCC-C---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEE---E
Q 014220 130 KPAIFYTGIDP-H---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVI---I 202 (428)
Q Consensus 130 ~~~l~YTg~~~-~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv---~ 202 (428)
+++|+||+... . ..+.+++|+|+|.. ..|++ |+.. . ...+||.|+ .+++|++||+ +
T Consensus 85 ~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~-~-------~~~iDp~vf-~D~dG~~Yl~~~~~ 147 (528)
T 1yrz_A 85 TFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL-N-------SSGFDPSLF-HDDDGRKWLVNMIW 147 (528)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC-C-------CSCSCCEEE-ECTTSCEEEEEEEE
T ss_pred EEEEEEecccCCCCCcccceEEEEEeCCCC----CCccc----cEEC-C-------CCcCCCceE-ECCCCCEEEEEeec
Confidence 99999997542 1 23457899988753 24764 4431 1 246899965 5578999999 5
Q ss_pred eeecC--CccEEEEEE-eCCCCCcEEccc--ccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 203 GSKIN--RKGLAILYR-SKDFVHWIKAKH--PLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 203 ga~~~--~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
+++.. ..+.|.+++ ++|. ++..+. .+.......++|||.+|+.+ | +++|++|...
T Consensus 148 ~~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~~g 207 (528)
T 1yrz_A 148 DYRKGNHPFAGIILQEYSEAE--QKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGG 207 (528)
T ss_dssp CCCTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cCCCCCCCCCeEEEEEECCcc--CCCCCCCEEEEcCCCCCccCCCEEEEEC--C-------------EEEEEEeCCC
Confidence 55432 235677777 5664 343332 23333345689999999997 5 7888887643
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.8e-16 Score=156.05 Aligned_cols=121 Identities=18% Similarity=0.258 Sum_probs=96.4
Q ss_pred CccC---CCCCCCCC------------CccCCCeEeeeEEEcCCCceEEEEcccCCC------CcceEEEEEEcCCCCCc
Q 014220 100 WIPH---DPAIYPSQ------------QSDINGCWSGSATILPGEKPAIFYTGIDPH------NRQVQNLAVPKNLSDPY 158 (428)
Q Consensus 100 W~~~---~~al~P~~------------~~D~~gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~lA~S~D~~d~~ 158 (428)
|++. .++|.|.. .||..+||+|||+. .+|+++||||++... +.+.|++|+|+|+
T Consensus 17 f~R~~~~nPIl~p~~~~~~~~~~~~~~~~D~~gv~sgsai~-~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dg---- 91 (356)
T 3taw_A 17 FERPTGVNPVIKPLPTKFYCPMREDSVAWEESDTFNPAATI-YDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDG---- 91 (356)
T ss_dssp CBCCTTTCCSBCCCCCEEEETTTTEEEETTSSEEEEEEEEE-ETTEEEEEEEEECSSSCSTTSSCEEECCEEESSS----
T ss_pred eeeCCCCCCeEccCCccccCcccccCCccccCCeECcEEEE-ECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCC----
Confidence 6655 35788875 68999999999987 599999999998643 4578999999885
Q ss_pred cceeEecCCCceecCCCCCCCC-----CCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEccccc
Q 014220 159 LREWVKSPKNPLMAPDAMNQIN-----TSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPL 230 (428)
Q Consensus 159 l~~w~k~~~nPvi~~~~~~~~~-----~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 230 (428)
.+|+|.+ +||+.+. +..+ ..++|||+|+ +.++|+|+|++++..+..+.+.+|+|+||.+|++.+.++
T Consensus 92 -i~w~~~~-~pvl~p~--~~~~~~~~~~~~~~DP~v~-~~~dg~y~m~yt~~~~~~~~i~la~S~Dl~~W~~~g~i~ 163 (356)
T 3taw_A 92 -IHFERDT-KPAFYPA--KDNQAENECPGGTEDPRIA-MTEDGTYVLLYTQWNRKVPRLAVATSKDLKHWTKFGPAF 163 (356)
T ss_dssp -SSCEECS-SCSBCCC--SSTTHHHHTTTEEEEEEEE-ECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred -ccceECC-cceecCC--CccccccccCCceECCEEE-EECCCEEEEEEEEeCCCCceEEEEECCCCCCceEeeeEc
Confidence 6899974 7999655 3222 3689999975 435889999998766567889999999999999987544
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.66 E-value=8e-16 Score=156.97 Aligned_cols=154 Identities=16% Similarity=0.172 Sum_probs=113.7
Q ss_pred ccCCcceEEECCEEEEEEeeCC--CCCC-CCCcEEEEEEeCCCCCCccCCC-CCCCC------------------CCccC
Q 014220 58 INDPNGVMIYKGIYHLFYQYNP--KGAV-WGNIVWAHSTSKDLINWIPHDP-AIYPS------------------QQSDI 115 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p--~~~~-~g~~~Wgha~S~Dlv~W~~~~~-al~P~------------------~~~D~ 115 (428)
+.+|. +++++|+|||||+.+. .+.. ...+.+++|+|+|+. |++++. ++.|. ..||.
T Consensus 170 v~aPs-Vi~~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~DG~-W~~~~~pli~~~~~~~~~~e~d~~~~~~~~~~wd~ 247 (408)
T 3p2n_A 170 VFTVE-IMKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP-WTKSEEPILSPADNGVWKGEEQDRFAVIKKGDFDS 247 (408)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCCTTCCCEEEEEEESSTTCC-CEECSSCSBCCCSCCEECSSSCCTTCEEECCSTTS
T ss_pred eEeeE-EEEECCEEEEEEEeecCCCCCcCCCceEEEEEECCCCC-EEECCcceeCCCCCceEEEecCCcccccccceecC
Confidence 56785 7789999999999863 2222 346789999999998 999754 44543 45777
Q ss_pred CCeEeeeEEEcCCCceEEEEcccCCC-------CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCe
Q 014220 116 NGCWSGSATILPGEKPAIFYTGIDPH-------NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPT 188 (428)
Q Consensus 116 ~gv~SGsav~~~dg~~~l~YTg~~~~-------~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~ 188 (428)
.+++.++++. .+|+++|+|++.... ..+.+++|+|+|.. ..|+|.++|||+... .||+
T Consensus 248 ~~v~~P~v~~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPVl~~~----------~dp~ 312 (408)
T 3p2n_A 248 HKVHDPCIIP-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK----GPYVKSPYNPISNSG----------HEIC 312 (408)
T ss_dssp SEEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSSC----------SSCC
T ss_pred CCeEcceEEE-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCC----CCcEECCCCCcccCC----------CCCe
Confidence 7888888876 599999999997531 24778999998853 379998888999533 3798
Q ss_pred EEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEccccccc
Q 014220 189 TAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHS 232 (428)
Q Consensus 189 V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~ 232 (428)
| |.+++|.|+|+. + ++.|.+.+++|+|+++|++.+.+...
T Consensus 313 V-w~~~dG~y~mi~--~-~g~gh~~i~~S~Dg~~W~~~~~i~~~ 352 (408)
T 3p2n_A 313 V-WPYNGGIASLIT--T-DGPEKNTIQWAPDGINFEIKSVIPGV 352 (408)
T ss_dssp E-EEETTEEEEEEC--S-SSTTCSEEEEESSSSCCEEEEECSCC
T ss_pred e-EecCCCEEEEEE--E-CCCCcEEEEECCCCCEEEEEeecccC
Confidence 4 765677777763 2 33445557899999999998765433
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.8e-14 Score=150.28 Aligned_cols=187 Identities=14% Similarity=0.224 Sum_probs=129.6
Q ss_pred CccCCcceEEECCEEEEEEeeCCC-----C-----CCCCCcEEEEEEeCCCCCCccCCCCCCCCC----------CccCC
Q 014220 57 WINDPNGVMIYKGIYHLFYQYNPK-----G-----AVWGNIVWAHSTSKDLINWIPHDPAIYPSQ----------QSDIN 116 (428)
Q Consensus 57 w~nDPng~~~~~G~YHlFYq~~p~-----~-----~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~----------~~D~~ 116 (428)
+..||. +++++|+||||..+... + .......|.+++|+||+||+.++.++.+.. .|. .
T Consensus 21 ~~~DP~-i~~~~g~yYly~t~~~~~~~~~g~~~~~~~~~~~~i~i~~S~DLv~W~~~g~v~~~~~~~~~~g~~~~~w~-~ 98 (487)
T 3c7f_A 21 LGADPV-ALTYNGRVYIYMSSDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKWA-G 98 (487)
T ss_dssp CCEEEE-EEEETTEEEEEEECCCCEECTTSCEECCCSTTCCSEEEEEESSSSSEEEEEEECCBCSTTGGGGTCSBTTC-S
T ss_pred cCCCCC-eEEECCEEEEEEcCCcccccccccccccccccccceEEEECCCCcCcEEccccccCCcccccccccccCcc-c
Confidence 678996 66789999999997642 1 112346799999999999999988776642 232 4
Q ss_pred CeEeeeEEEc-CC--CceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCC-CCCccCCeEEEE
Q 014220 117 GCWSGSATIL-PG--EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQIN-TSSFRDPTTAWL 192 (428)
Q Consensus 117 gv~SGsav~~-~d--g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~-~~~~RDP~V~~~ 192 (428)
++|.++++.. .| |+++||||... +.+++|+|+|.. -.|++..+.|++.... ++.. ....+||.|+ .
T Consensus 99 ~~WAP~v~~~~~~g~g~yylyyt~~~----~~i~va~s~~p~----Gpw~~~~g~pli~~~~-~g~~~~~~~iDp~vf-~ 168 (487)
T 3c7f_A 99 ASWAPSIAVKKINGKDKFFLYFANSG----GGIGVLTADSPI----GPWTDPIGKPLVTPST-PGMSGVVWLFDPAVF-V 168 (487)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEESTT----BCEEEEEESSTT----CCCBCSSSSCSBCTTS-TTCTTCSSBCCCEEE-E
T ss_pred cCcchheEEEecCCCCeEEEEEEcCC----cEEEEEEeCCCC----CCcccCCCCeEeecCC-CCccCCCCccCCceE-E
Confidence 7999999863 14 69999999742 568999998864 3588754568775320 2211 1457999965 4
Q ss_pred CCCCeEEEEEeeecCC-----------ccEEEEE-EeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCC
Q 014220 193 GPDKRWRVIIGSKINR-----------KGLAILY-RSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDM 260 (428)
Q Consensus 193 ~~~g~y~Mv~ga~~~~-----------~G~i~ly-~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~ 260 (428)
+++|++||++++.... ...+.+. -++|+..|......+. ...+.|+|.+++.+ |
T Consensus 169 DddG~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~g~~~~i~---~p~~~Egp~i~k~~--G--------- 234 (487)
T 3c7f_A 169 DDDGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTID---APFMFEDSGLHKYN--G--------- 234 (487)
T ss_dssp CTTSCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTSSSEEEEEEEEC---CTTEEEEEEEEEET--T---------
T ss_pred cCCCCEEEEECCcccCccccccccccCCCceEEEEECCCeeeccCccEEec---CCceEecceEEEEC--C---------
Confidence 4789999999874310 1224444 4799999975432232 23589999999997 5
Q ss_pred CCCceeEEEEeeC
Q 014220 261 GPNTKHVLKVSLD 273 (428)
Q Consensus 261 ~~~~~~vl~~s~~ 273 (428)
+++|++|..
T Consensus 235 ----~YYl~ys~~ 243 (487)
T 3c7f_A 235 ----TYYYSYCIN 243 (487)
T ss_dssp ----EEEEEEEEC
T ss_pred ----EEEEEEECC
Confidence 667766653
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-14 Score=152.14 Aligned_cols=179 Identities=16% Similarity=0.127 Sum_probs=125.3
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCc------cCCCeEeeeEEEcCC
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS------DINGCWSGSATILPG 128 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~------D~~gv~SGsav~~~d 128 (428)
.|++.||+ +++++|+||||++..+.. ..|.+++|+||+||+..+.+|.+...+ ...++|+++++. .+
T Consensus 9 ~g~~~DP~-ii~~~~~yY~~~s~~~~~-----~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 81 (533)
T 1yif_A 9 KGFNPDPS-ICRAGEDYYIAVSTFEWF-----PGVQIHHSKDLVNWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSY-SD 81 (533)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSEEEEECSBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCCe-EEEECCEEEEEEecCCCC-----CCeEEEEeCCCCCCeECCccccCcccccccCCCCCCCEECceEEE-EC
Confidence 36889997 678899999998865321 258999999999999999888765322 247899999987 59
Q ss_pred CceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEee
Q 014220 129 EKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 129 g~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
|+++|+||+.... ....+++|+|+|.. ..|++ |+.-. ...+||.++ .+++|++||+++.
T Consensus 82 g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~--------~~~iDp~~f-~D~dG~~Yl~~~~ 144 (533)
T 1yif_A 82 GKFWLIYTDVKVVDGAWKDCHNYLVTCETIN----GDWSE----PIKLN--------SSGFDASLF-HDTDGKKYLLNML 144 (533)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC--------CSCSCCEEE-ECTTSCEEEEEEE
T ss_pred CEEEEEEEeccCCCCCcccccEEEEEeCCCC----CCccc----cEEcC--------CCcCCCceE-ECCCCCEEEEEEe
Confidence 9999999976431 23567899998753 35774 44321 135899965 4578999999885
Q ss_pred ecC-----CccEEEEEE-eCCCCCcEEccc--ccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 205 KIN-----RKGLAILYR-SKDFVHWIKAKH--PLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 205 ~~~-----~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
... ..+.|.+++ ++|+. +..++ .+.......++|||.+++.+ | +++|++|...
T Consensus 145 ~~~~~g~~~~~~i~~~~l~~d~~--~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 205 (533)
T 1yif_A 145 WDHRIDRHSFGGIVIQEYSDKEQ--KLIGKPKVIFEGTDRKLTEAPHLYHIG--N-------------YYYLLTAEGG 205 (533)
T ss_dssp ECCCTTSCSEEEEEEEEEETTTT--EECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cccccCCCCCCCEEEEEECCccC--CCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCC
Confidence 321 124566666 66653 33332 23333344589999999997 5 7788887643
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-14 Score=148.85 Aligned_cols=177 Identities=17% Similarity=0.146 Sum_probs=128.2
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCC--ccC-CCeEeeeEEEc-CCCceEE
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ--SDI-NGCWSGSATIL-PGEKPAI 133 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~--~D~-~gv~SGsav~~-~dg~~~l 133 (428)
.-|| ++++++|+||||.++.+.+.. ....|.+++|+||+||+.++.+|.+... +.. .++|.+.++.. .+|+++|
T Consensus 24 aHDP-sIi~~~g~YYly~T~~~~~~~-~~~gi~v~sS~DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~V~y~~~dGkYYL 101 (441)
T 3nqh_A 24 AHGA-CIVEENGRYYLFGEYKSDKSN-AFPGFSCYSSDDLVNWKFERVVLPMQSSGILGPDRVGERVKVMKCPSTGEYVM 101 (441)
T ss_dssp CEEE-EEEEETTEEEEEEECCCSSCS-SCCCEEEEEESSSSSCEEEEEEECCCSSSTTSTTEEEEEEEEEECTTTCCEEE
T ss_pred ccCC-EEEEECCEEEEEEEcCCccCC-CCCCeeEEECCCCCCcEECceeeccCCccccCCCCccCCceeEEEccCCEEEE
Confidence 3488 688999999999998764332 3467999999999999999998877543 322 35799998763 4899999
Q ss_pred EEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEE
Q 014220 134 FYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLA 212 (428)
Q Consensus 134 ~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i 212 (428)
|||+.... ..+.+++|+|++.. -.|+.. +|++... . ....+||.|+ .+++|++||++++ +.|
T Consensus 102 yyt~~~~~~~~~~igVAtSdsP~----GPwt~~--gpl~~~g--~---~~~~IDPsvF-~DdDGk~YL~~g~-----~~I 164 (441)
T 3nqh_A 102 YMHADDMNYKDPHIGYATCSTIA----GEYKLH--GPLLYEG--K---PIRRWDMGTY-QDTDGTGYLLLHG-----GIV 164 (441)
T ss_dssp EEEEEETTSCSCEEEEEEESSTT----SCCEEE--EECEETT--E---ECCCCSEEEE-ECTTSCEEEEEGG-----GEE
T ss_pred EEEeCCCCCCcceEEEEEeCCCC----CCceEc--ceeecCC--C---cccccCceEE-EeCCCCEEEEeCC-----CcE
Confidence 99987532 35678999998764 357753 4776432 1 1246899964 5578999999985 233
Q ss_pred EEEE-eCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 213 ILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 213 ~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
++ ++|+.++.-....+. .+...|||.+|+.+ | +++|++|..
T Consensus 165 --~eLs~D~~~~~g~~~~i~---~g~~~EgP~i~K~~--G-------------~YYL~~S~~ 206 (441)
T 3nqh_A 165 --YRLSKDYRTAEEKVVSGV---GGSHGESPAMFKKD--G-------------TYFFLFSNL 206 (441)
T ss_dssp --EEECTTSSSEEEEEESCS---TTCCCEEEEEEEET--T-------------EEEEEEECS
T ss_pred --EEeCCccccccCceEEeC---CCCceECcEEEEEC--C-------------EEEEEEeCC
Confidence 34 789998864322222 23468999999997 5 788888863
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.2e-14 Score=150.10 Aligned_cols=178 Identities=17% Similarity=0.119 Sum_probs=126.0
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCc------cCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS------DINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~------D~~gv~SGsav~~~dg 129 (428)
|++.||+ +++++|+||||++.... ...|.+++|+||+||+..+.+|.+...+ +..++|+++++. .+|
T Consensus 11 g~~~DP~-i~~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 83 (535)
T 2exh_A 11 GFHPDPS-ICRVGDDYYIAVSTFEW-----FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDG 83 (535)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEECCCCC-----CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 7899996 68899999999875431 2358899999999999999888765322 347899999987 599
Q ss_pred ceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeee
Q 014220 130 KPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (428)
Q Consensus 130 ~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~ 205 (428)
+++|+||+.... ....+++|+|+|.. ..|++ |+.-. ...+||.|+ .+++|++||+++..
T Consensus 84 ~~ylyyt~~~~~~g~~~~~~~~va~s~~~~----Gpw~~----p~~~~--------~~~iDp~vf-~DddG~~Yl~~~~~ 146 (535)
T 2exh_A 84 KFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN--------SSGFDPSLF-HDEDGRKYLVNMYW 146 (535)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC--------CSCSCCEEE-ECTTSCEEEEEEEE
T ss_pred EEEEEEEeccCCCCCccccceEEEEeCCCC----CCccc----cEecC--------CCcCCCceE-ECCCCCEEEEEEec
Confidence 999999976431 23567899998753 35764 44321 235899965 55789999998853
Q ss_pred cC-----CccEEEEEE-eCCCCCcEEccc--ccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 206 IN-----RKGLAILYR-SKDFVHWIKAKH--PLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 206 ~~-----~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
.. ..+.|.+++ +.|+ |+..++ .+..+....++|||.+++.+ | +++|++|...
T Consensus 147 ~~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 206 (535)
T 2exh_A 147 DHRVDHHPFYGIVLQEYSVEQ--KKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 206 (535)
T ss_dssp CCCTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCccCCCCCCcEEEEEECCcc--CCCCCCcEEEEcCCCCCccccceEEEEC--C-------------EEEEEEeCCC
Confidence 21 124566776 5664 554443 23333344689999999997 5 7888887643
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.59 E-value=7.5e-15 Score=147.58 Aligned_cols=124 Identities=17% Similarity=0.253 Sum_probs=98.2
Q ss_pred CCCCccCCCCCCCCC-------------CccCCCeEeeeEEEcCCCceEEEEcccCCC------CcceEEEEEEcCCCCC
Q 014220 97 LINWIPHDPAIYPSQ-------------QSDINGCWSGSATILPGEKPAIFYTGIDPH------NRQVQNLAVPKNLSDP 157 (428)
Q Consensus 97 lv~W~~~~~al~P~~-------------~~D~~gv~SGsav~~~dg~~~l~YTg~~~~------~~~~q~lA~S~D~~d~ 157 (428)
+++++...++|.|+. .||+.+||+|+++. .+|+++||||+.... +.+.+++|+|+|+
T Consensus 19 f~r~~~~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai~-~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DG--- 94 (364)
T 3qc2_A 19 FERPKNVNPVISPIENTKFYCPLTKDSIAWESNDTFNPAATL-YNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDG--- 94 (364)
T ss_dssp CBCCTTTCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEEE-ETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSS---
T ss_pred ceeCCCCCCeEecCCcccccccccccccccccCceECceEEE-ECCEEEEEEEEECCCCcccCCCceEEEEEEeCCC---
Confidence 345554467899985 68999999999987 599999999998653 4578999999985
Q ss_pred ccceeEecCCCceecCCCCCCCCC-----CCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEccccc
Q 014220 158 YLREWVKSPKNPLMAPDAMNQINT-----SSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPL 230 (428)
Q Consensus 158 ~l~~w~k~~~nPvi~~~~~~~~~~-----~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 230 (428)
.+|++. .+||+.+. ...+. .++|||+|+ ..++|+|+|++++.....+++.+++|+|+++|++.+.++
T Consensus 95 --i~w~~~-~~Pvl~P~--~~~~~~~e~~~gv~DP~v~-~~edG~yym~Yta~~~~~~~i~lA~S~Dl~~W~k~g~i~ 166 (364)
T 3qc2_A 95 --THFQRE-KTPVFYPD--NDSQKELEWPGGCEDPRIA-VTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAF 166 (364)
T ss_dssp --SSCEEC-SSCSBCCC--SSTTHHHHTTTEEEEEEEE-ECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETT
T ss_pred --ceeeEc-CcCeEcCC--CccccccccCCcEECCEEE-EeCCCEEEEEEEecCCCCeEEEEEEECCCCEEEEeeecc
Confidence 789996 46998665 33222 578999975 435889999999876667789999999999999987543
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.5e-14 Score=142.63 Aligned_cols=121 Identities=10% Similarity=0.122 Sum_probs=97.4
Q ss_pred CCCCCccCCCCCCCCC-CccCCCeEeeeEEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCC
Q 014220 96 DLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD 174 (428)
Q Consensus 96 Dlv~W~~~~~al~P~~-~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~ 174 (428)
.+++|+..| +|.|+. +| +.|||+++++.. +|+++|||++....+...+++|+|+|+ .+|++.+ +|++.+.
T Consensus 35 ~~~r~~~~P-iL~p~~~~~-~~gv~n~~~i~~-~g~~~lfY~~~~~~~~~~~~~A~S~Dg-----i~w~~~~-~pvl~p~ 105 (338)
T 1vkd_A 35 PVWRYSKNP-IIGRNPVPK-GARVFNSAVVPY-NGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQWVD 105 (338)
T ss_dssp SEEECTTCC-SBCBSCSTT-EEEEEEEEEEEE-TTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCEEC
T ss_pred ceEECCCCc-eECCCCCcc-cCeEEccEEEEE-CCEEEEEEEEECCCCcEEEEEEEeCCC-----CccEECC-CCEEeCC
Confidence 578899777 788984 77 789999999874 999999999987666788999999985 6999964 7888543
Q ss_pred CCCCCCCCCcc-CCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEccc
Q 014220 175 AMNQINTSSFR-DPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKH 228 (428)
Q Consensus 175 ~~~~~~~~~~R-DP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~ 228 (428)
.....+..++| ||+|+.. +++|+|++++ ....+.+.+++|+|+++|++.+.
T Consensus 106 ~~~~~~~~g~~yDP~v~~~--~d~yym~yt~-~~~~~~i~la~S~Dl~~W~~~~~ 157 (338)
T 1vkd_A 106 VNGEPFQPSYAYDPRVVKI--EDTYYITFCT-DDHGPTIGVGMTKDFKTFVRLPN 157 (338)
T ss_dssp TTSCBCCCSSEEEEEEEEE--TTEEEEEEEE-ESSSEEEEEEEESSSSSEEEECC
T ss_pred CCCccccCCEEeCcEEEEE--CCEEEEEEEE-cCCcceEEEEEECCCCeEEECCc
Confidence 11123567899 9997543 6799999998 65667899999999999998764
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=6.7e-13 Score=134.01 Aligned_cols=156 Identities=16% Similarity=0.174 Sum_probs=108.8
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCC-CCCCcEEEEEEeCCC-CCCccCC-CCCCCC------------------CCccCC
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGA-VWGNIVWAHSTSKDL-INWIPHD-PAIYPS------------------QQSDIN 116 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~-~~g~~~Wgha~S~Dl-v~W~~~~-~al~P~------------------~~~D~~ 116 (428)
+..|. +++.+|+|+|||..+.... ......+++|+|+|+ ..|++.+ +.|.+. ..||..
T Consensus 125 vwaPs-vi~~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~Gpw~~~~~Pvi~~~~~~~w~~ddd~~~~~~~~~~~d~~ 203 (374)
T 3r4z_A 125 VFTPE-VLRHNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGPWTKSDAPILSPENDGVWDTDEDNRFLVKEKGSFDSH 203 (374)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSSCCTTCCBEEEEEEESSTTCCCEECSSCSBCCCCCSEECSSSSCTTCEEECCSTTSS
T ss_pred EECCE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEECCCCCCeEECCCCEeCCCcCCceeecCCceEEEecCCccccC
Confidence 45574 6778999999999765432 123578999999997 6899864 445443 124555
Q ss_pred CeEeeeEEEcCCCceEEEEcccCCCC-------cceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeE
Q 014220 117 GCWSGSATILPGEKPAIFYTGIDPHN-------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTT 189 (428)
Q Consensus 117 gv~SGsav~~~dg~~~l~YTg~~~~~-------~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V 189 (428)
+++.++++. .+|+++|+|++..... .+.+++|+|++.. ..|++.+.+||+... +||+|
T Consensus 204 ~~~~P~v~~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~----Gpw~~~~~~Pi~~~~----------~dp~V 268 (374)
T 3r4z_A 204 KVHDPCLMF-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPL----GPYTKSEYNPITNSG----------HEVAV 268 (374)
T ss_dssp EEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTT----CCCEECTTCCCCSSC----------SSCCE
T ss_pred ccccceEEE-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCC----CCCEECCCCCEeCCC----------CCCce
Confidence 678888776 6999999999975321 3578999998753 369998889998522 49995
Q ss_pred EEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccC
Q 014220 190 AWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV 233 (428)
Q Consensus 190 ~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~ 233 (428)
|..+ +.|+++++....+.+ .++.|+|+++|++.+.+...+
T Consensus 269 -~~~~-~g~~~mv~~~g~~~~--~l~~S~Dg~~W~~~~~i~~~p 308 (374)
T 3r4z_A 269 -WPYK-GGMATMLTTDGPEKN--TCQWAEDGINFDIMSHIKGAP 308 (374)
T ss_dssp -EEET-TEEEEEECSSSTTCS--EEEEETTSSSCEEEEECSCCC
T ss_pred -EEeC-CEEEEEEEecCCCce--EEEECCCcCCeEEcceeccCC
Confidence 6644 556544544333344 566799999999988654433
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3.4e-12 Score=130.02 Aligned_cols=156 Identities=21% Similarity=0.200 Sum_probs=109.4
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCC-CCCCcEEEEEEeCC-CCCCccCC-CCCCCCC------------------CccCC
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGA-VWGNIVWAHSTSKD-LINWIPHD-PAIYPSQ------------------QSDIN 116 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~-~~g~~~Wgha~S~D-lv~W~~~~-~al~P~~------------------~~D~~ 116 (428)
+.+|. +++.+|+|+|||..+.... ..+...+|.|+|++ .-.|++.+ ++|.|.. .||..
T Consensus 165 v~aP~-Vi~~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~Gpwt~~~~Pvl~~~~~~~W~~ddd~~~~~~~~~~wD~~ 243 (404)
T 4ak5_A 165 VFTPE-VMEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGLWTKTDKPVLEPSDTGEWEGDEDNRFKVVSKGDFDSH 243 (404)
T ss_dssp EEEEE-EEEETTEEEEEEEEECSCCCTTCCCEEEEEEESSTTCCCEECSSCSBCCCSCCEECSSSSCTTCEEECCSTTSS
T ss_pred EEeeE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEEeCCCCCceECCCceecCCCCcceeeccCceeeeccCCcccCC
Confidence 56774 6788999999998765321 12356899999986 34899875 4555532 35667
Q ss_pred CeEeeeEEEcCCCceEEEEcccCCCC-------cceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeE
Q 014220 117 GCWSGSATILPGEKPAIFYTGIDPHN-------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTT 189 (428)
Q Consensus 117 gv~SGsav~~~dg~~~l~YTg~~~~~-------~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V 189 (428)
+++.++++. .+|+++|||+|..... .+.+++|+|++.. ..|+|.+.|||+... .+++
T Consensus 244 ~~~~P~v~~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~----Gpw~k~~~nPv~~~~----------~e~~- 307 (404)
T 4ak5_A 244 KVHDPCIIP-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPM----GPYVKSEYNPISNSG----------HEVC- 307 (404)
T ss_dssp EEEEEEEEE-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCCEECTTCCSCSSC----------SSCC-
T ss_pred cEECCEEEE-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCC----CCcEECCCCceecCC----------Ccce-
Confidence 889999876 6999999999985321 4689999998853 369998889999532 1556
Q ss_pred EEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccC
Q 014220 190 AWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV 233 (428)
Q Consensus 190 ~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~ 233 (428)
+|.+.++.|+|+.. ...+.| .++.|+|+++|++.+.+...+
T Consensus 308 Vw~~~dg~~~ll~~-~g~~~g--~l~~S~Dg~~W~~~~~l~~~p 348 (404)
T 4ak5_A 308 VWPYKGGIASLITT-DGPEKN--TLQWSPDGINFEIMSVVKGAP 348 (404)
T ss_dssp EEEETTEEEEEECS-SSTTCS--EEEEESSSSCCEEEEECSCCC
T ss_pred EEEeCCcEEEEEEe-cCCCce--EEEECCCCCeEEEeeeeccCc
Confidence 57755554456543 223445 567799999999988654433
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.1e-12 Score=135.92 Aligned_cols=201 Identities=14% Similarity=0.107 Sum_probs=131.6
Q ss_pred CCCccccccCCCC---CccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC--CccCCCe
Q 014220 44 PYRTGYHFQPPKN---WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ--QSDINGC 118 (428)
Q Consensus 44 ~~Rp~~H~~p~~g---w~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~--~~D~~gv 118 (428)
..+|..++....| ..-|| .+++++|+||||........ ....+..++|+||+||+..+.+|.+.. .++..++
T Consensus 41 ~~~~g~~w~d~~g~~i~a~DP-~Ii~~~g~YY~~~T~~~~~~--~~~gi~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~~ 117 (526)
T 3vsf_A 41 VIVNGTQFKDTSGNVIHAHGG-GMLKHGDYYYWYGEYRDDSN--LFLGVSCYRSKDLVNWEYRGEVLSRNSAPELNHCNI 117 (526)
T ss_dssp EEESSBCCBCTTSCBCCCEEE-EEEEETTEEEEEEEEECTTS--SEEEEEEEEESSSSSCEEEEEEEETTSSGGGSSCEE
T ss_pred eEeCCCccCCCCCCEEeccCC-eEEEECCEEEEEEecCCCCC--CcCcEEEEECCCCCCcCCCCccCCCCCCcCcccCce
Confidence 3444444443332 35699 57889999999998764322 236789999999999999998886653 4566679
Q ss_pred EeeeEEEc-CCCceEEEEcccCC--CCcceEEEEEEcCCCCCccceeEecC-CCceecCC-CCCCCCCCCccCCeEEEEC
Q 014220 119 WSGSATIL-PGEKPAIFYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSP-KNPLMAPD-AMNQINTSSFRDPTTAWLG 193 (428)
Q Consensus 119 ~SGsav~~-~dg~~~l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~-~nPvi~~~-~~~~~~~~~~RDP~V~~~~ 193 (428)
|.+.++.. .+|+++|||+.... .....+++|+|++.. -.|+... ..|+.... ...+......+||.| |.+
T Consensus 118 WAP~v~~~~~~Gkyymy~~~~~~~~~~~~~igvats~~p~----Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~v-f~D 192 (526)
T 3vsf_A 118 ERPKVMYNASTGEFVMWMHWENGINYGQARAAVAYSKTPD----GKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNV-FVD 192 (526)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCSCCCEEEEEEESSSS----SCCEEEEEECSSCTTCCEETTEESCCCCSEEE-EEC
T ss_pred ECCEEEEECCCCEEEEEEEeeCCCCCCcceEEEEEcCCCC----CCCEeccccccccccccccCCCCCcccccccE-EEC
Confidence 99999864 38999999996521 135788999998864 2466431 12332110 000111245699996 455
Q ss_pred CCCeEEEEEeeecCCccEEEEEE-eCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 014220 194 PDKRWRVIIGSKINRKGLAILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (428)
Q Consensus 194 ~~g~y~Mv~ga~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~ 272 (428)
++|++||++++..+ +.|.+++ ++|+..+......+. .+...|+|.+|+.+ | +++|++|.
T Consensus 193 ~dG~~Yl~~~~~~~--~~i~i~~l~~d~~~~~~~~~~~~---~g~~~EgP~i~k~~--G-------------~YYL~~S~ 252 (526)
T 3vsf_A 193 TDGKGYFISAANEN--MDLHLYELTPDYKNIASLKAKLF---VGQQREAPCLIKRN--G-------------YYYLITSG 252 (526)
T ss_dssp TTSCEEEEEEETTT--TEEEEEEECTTSSSEEEEEEEES---TTSCCEEEEEEESS--S-------------CEEEEEEC
T ss_pred CCCCEEEEEEecCC--CceEEEEcCCCcccccCceEEeC---CCCCcCCeEEEEEC--C-------------EEEEEEcC
Confidence 78999999986432 3344544 577776654222222 23568999999987 5 77888874
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.9e-11 Score=128.99 Aligned_cols=178 Identities=15% Similarity=0.136 Sum_probs=121.6
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCC------ccCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ------SDINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~------~D~~gv~SGsav~~~dg 129 (428)
|+..||. +++++|+|+||..... + ...+..++|+||+||+..+.+|.+... .+..++|.++++. .+|
T Consensus 10 ~~~~DP~-i~~~~~~yY~~~s~~~----~-~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 82 (538)
T 3c2u_A 10 GFNPDPS-IVRAGDDYYIATSTFE----W-FPGVQIHHSKDLVHWHLVAHPLSTTEFLDMKGNPDSGGIWAPDLSY-ADG 82 (538)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E-ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEccCC----C-CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 6889995 7889999999875421 1 235788999999999999888865431 1346899999987 599
Q ss_pred ceEEEEcccCC-C---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeee
Q 014220 130 KPAIFYTGIDP-H---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (428)
Q Consensus 130 ~~~l~YTg~~~-~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~ 205 (428)
+++|+||.... . ..+.+++|+|+|.. ..|++ |+.-.. ..+||.++ .+++|+.||+.+..
T Consensus 83 ~~yly~t~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~~--------~~iDp~~f-~DddG~~Yl~~~~~ 145 (538)
T 3c2u_A 83 KFWLIYTDVKVVDGMWKDCHNYLTTAEDIK----GPWSK----PILLNG--------AGFDASLF-HDPSGKKYLVNMYW 145 (538)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----CCCCC----CEEEEC--------SCSCCEEE-ECTTSCEEEEEEEE
T ss_pred EEEEEEEeccCCCCCcccccEEEEEECCCC----CCccc----cEecCC--------CcCCCeeE-ECCCCCEEEEEEec
Confidence 99999997643 1 23567889988753 24764 443221 24799965 44689999998753
Q ss_pred cC-----CccEEEEEE-eCCCCCcEEccc--ccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 206 IN-----RKGLAILYR-SKDFVHWIKAKH--PLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 206 ~~-----~~G~i~ly~-S~Dl~~W~~~~~--~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
.. ..+.|.+.+ +.|. ++..+. .+..+......|+|.+++.+ | +++|++|...
T Consensus 146 ~~~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~--G-------------~YYL~~s~gg 205 (538)
T 3c2u_A 146 DQRVYHHNFYGIALQEYSVAE--EKLIGKPEIIYKGTDIAYTEGPHLYYIN--D-------------MYYLMTAEGG 205 (538)
T ss_dssp CCCTTSCSEEEEEEEEEETTT--TEECSCCEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCccCCCCCCCEEEEEECCcc--CCCCCCCEEEecCCCCCccccceEEEEC--C-------------EEEEEEecCC
Confidence 21 124566666 4554 444443 23333334579999999987 5 7888887643
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=99.30 E-value=4.2e-11 Score=124.31 Aligned_cols=181 Identities=17% Similarity=0.203 Sum_probs=113.5
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCC--------------cc-CCCeEeee
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ--------------SD-INGCWSGS 122 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~--------------~D-~~gv~SGs 122 (428)
.-||. +++++|+|+||..+ ...++|+||+||+..+.+|.+... |. ..++|.++
T Consensus 36 ~~DPs-ii~~~g~YYl~~T~-----------~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~l~~~~~w~~~~~~WAP~ 103 (470)
T 2x8s_A 36 VHDPS-IIETNGTFYVFGSH-----------LASAKSNDLMQWQQLTTSVSNDNPLIPNVYEELKETFEWAQSDTLWAAD 103 (470)
T ss_dssp CSSCE-EEEETTEEEEECST-----------TCEEEESSSSBCEEEECSCSTTCTTSTTHHHHTHHHHHHHTCSSCCCCE
T ss_pred CCCCE-EEEECCEEEEEECc-----------CceEECCCcccceeccccccccccccccccccccccccccCCCceECCe
Confidence 56995 77889999998542 135899999999999877754321 22 36899999
Q ss_pred EEEcCCCceEEEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCC-----CCCC---CCCCccCCeEEEEC
Q 014220 123 ATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDA-----MNQI---NTSSFRDPTTAWLG 193 (428)
Q Consensus 123 av~~~dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~-----~~~~---~~~~~RDP~V~~~~ 193 (428)
++...||+++|||+..... ....+++|+|+|.. -.|+.. +.++..... ...+ .....+||.|+ .+
T Consensus 104 vi~~~dGkyylyys~~~~~~~~~~IgvatSddp~----GPw~~~-g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf-~D 177 (470)
T 2x8s_A 104 VTQLADGKYYMYYNACRGDSPRSAMGVAVADNIE----GPYKNK-GIFLKSGMEGTSSDGTPYDATKHPNVVAPHTF-FD 177 (470)
T ss_dssp EEECTTSCEEEEEEEECSSSCCEEEEEEEESSTT----CCCEEE-EEEEEECCSSBCTTSSBCCTTTSCCSCCCEEE-EC
T ss_pred EEEecCCEEEEEEEeccCCCCccEEEEEEeCCCC----CCceeC-CeeeccCcccccccccccccccCCCCCCCCEE-Ec
Confidence 8865689999999986432 45678899998763 358875 234433110 0001 12356899965 44
Q ss_pred CCCeEEEEEeeecCCccEEEEEEe-CCC---CCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEE
Q 014220 194 PDKRWRVIIGSKINRKGLAILYRS-KDF---VHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269 (428)
Q Consensus 194 ~~g~y~Mv~ga~~~~~G~i~ly~S-~Dl---~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~ 269 (428)
++|++||++|+.. +.|.+.+- .|. ..+...+..+.. ......|.|.+++....| +++|+
T Consensus 178 dDG~~Yl~~g~~~---~gI~~~eL~~d~~~~~~~~~~~~~i~~-g~~~~~EGP~i~~~K~~G-------------~YYL~ 240 (470)
T 2x8s_A 178 KDGKLWMVYGSYS---GGIFILEMNPKTGFPLPGQGYGKKLLG-GNHSRIEGPYVLYNPDTQ-------------YYYLY 240 (470)
T ss_dssp TTSCEEEEECBST---TCEEEEEBCTTTSSBCTTCTTCEEEEC-CSSCSEEEEEEEEETTTT-------------EEEEE
T ss_pred CCCCEEEEeeecC---CcEEEEEECCccCcCcCCcccceEecC-CCCCceeccEEEEEccCC-------------EEEEE
Confidence 7899999998642 23555553 332 112111111111 123468999999542214 88888
Q ss_pred EeeC
Q 014220 270 VSLD 273 (428)
Q Consensus 270 ~s~~ 273 (428)
+|..
T Consensus 241 ~S~g 244 (470)
T 2x8s_A 241 LSYG 244 (470)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8864
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.7e-08 Score=99.46 Aligned_cols=183 Identities=16% Similarity=0.176 Sum_probs=110.5
Q ss_pred cCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCC---CCCCCccCCCeEeeeEEEcCCCceEEEE
Q 014220 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI---YPSQQSDINGCWSGSATILPGEKPAIFY 135 (428)
Q Consensus 59 nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al---~P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (428)
-||. ++.++++|+||+......+ .+....|+||++|+..+... .+...+...++|.+.++. .+|+++|||
T Consensus 18 aDP~-ii~~~d~yY~~~st~~~~~-----g~~i~~S~DL~~w~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~yylyy 90 (330)
T 3k1u_A 18 ADPM-IYKHNDGYYYFTASVPEYD-----RIEVRKAKTIEGLRNAEPVDVWRRHESGEMSNLIWAPEIHF-INGAWYIYF 90 (330)
T ss_dssp EEEE-EEECTTSCEEEEEECTTCC-----EEEEEEESSTGGGTTSCCEEEEECCSSSTTSEEEEEEEEEE-ETTEEEEEE
T ss_pred CCCE-EEEECCEEEEEEeccCCCC-----CEEEEEcCCcCCccCCcceeecccCCCCccCCCeECCEEEE-ECCeEEEEE
Confidence 6995 7788999999998765332 57778999999999765432 222333456899999876 599999999
Q ss_pred cccCCC-----CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec--CC
Q 014220 136 TGIDPH-----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--NR 208 (428)
Q Consensus 136 Tg~~~~-----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~--~~ 208 (428)
+..... ....+..+++.+..++.-..|+.. ..+... ....-.||.|+ .+++++|+|+.+... .+
T Consensus 91 s~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~---~~~~~~-----~~~~~IDp~vf-~Ddd~~~~~~~~~~~~~~~ 161 (330)
T 3k1u_A 91 AAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEK---GRIKTA-----WESFSLDATIF-EHNEKLYYVWAQQDINIKG 161 (330)
T ss_dssp EEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEE---EECCCS-----SCSCEEEEEEE-EETTEEEEEEEECCTTSSS
T ss_pred EeccCCCCCCcccceeeeEEEeCCCCCcccccccc---ccccCC-----CCCCccCceEE-EECCccEEEEeecCCCcCC
Confidence 975432 112234455554444433345542 112111 11234799965 446667776665433 23
Q ss_pred ccEEEEEEeCCCCCcEEcccc--cccC------CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 209 KGLAILYRSKDFVHWIKAKHP--LHSV------KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~--l~~~------~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
.+.|.+.+-++ .++..+++ +..+ ......|-|-+++.+ | +++|++|...
T Consensus 162 ~~~i~i~~l~~--~~~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~--G-------------~YYL~ys~~~ 218 (330)
T 3k1u_A 162 HSNIYIAEMEN--PWTLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN--G-------------KIFITYSASA 218 (330)
T ss_dssp SBEEEEEEEEE--TTEECSCCEEEECSCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CceEEEEECCC--CccccCCcEEecCCCccccccCCceeeCCEEEEEC--C-------------EEEEEEEeCC
Confidence 34566666433 23444432 2111 123457999999987 5 8888888754
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=4.2e-09 Score=109.20 Aligned_cols=178 Identities=13% Similarity=0.122 Sum_probs=115.8
Q ss_pred cCCcceEE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCC--CC-CCccCCCeEeeeEEEcCCCceEEE
Q 014220 59 NDPNGVMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY--PS-QQSDINGCWSGSATILPGEKPAIF 134 (428)
Q Consensus 59 nDPng~~~-~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~--P~-~~~D~~gv~SGsav~~~dg~~~l~ 134 (428)
-||. +++ .+|+|+||..... ...+..++|+||+||+..+.++. +. ......++|.+.++. .+|+++|+
T Consensus 20 ~DP~-iir~~dg~YY~~~T~~~------~~~i~i~~S~DLv~W~~~~~~~~w~~~~~~~~~~~~WAP~v~~-~~Gkyyly 91 (468)
T 3akh_A 20 ADPH-IFKHTDGYYYFTATVPE------YDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHF-IDGKWYVY 91 (468)
T ss_dssp EEEE-EEECTTSCEEEEEECTT------CCEEEEEEESSTGGGGGCCCEEEEECCSSSTTCEEEEEEEEEE-ETTEEEEE
T ss_pred CCCE-EEEecCCEEEEEEEeCC------CCCEEEEECCCccccccCCCcceecCCCCCCCCCCEecceEEE-ECCEEEEE
Confidence 8995 667 5999999987531 24689999999999998875332 21 122346899999886 48999999
Q ss_pred EcccCCCC--cceEEEEE--EcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC---
Q 014220 135 YTGIDPHN--RQVQNLAV--PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--- 207 (428)
Q Consensus 135 YTg~~~~~--~~~q~lA~--S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~--- 207 (428)
|+...... ...+++|+ ++|. .-..|+.. + .++.+. .....||.+++ ++|++||+++....
T Consensus 92 ys~~~~~~~~~~~i~va~~~s~dp---~~Gpw~~~-g-~~~~~~------~~~~IDp~vf~--ddG~~Yl~~g~~~~~~~ 158 (468)
T 3akh_A 92 FAAGSTSDVWAIRMYVLESGAANP---LTGSWTEK-G-QIATPV------SSFSLDATTFV--VNGVRHLAWAQRNPAED 158 (468)
T ss_dssp EEEECSSCTTCCEEEEEEECCSCT---TTSCCEEE-E-ECCCSS------CSCEEEEEEEE--ETTEEEEEEEECCTTSS
T ss_pred EEeECCCCCCceeEEEEEccCCCC---CCCCCccc-c-eeecCC------CCCcCcCeEEE--ECCEEEEEEEccCCCCC
Confidence 99865322 34556665 4443 01368764 2 233221 12357999754 58999999986531
Q ss_pred CccEEEEEEeCCCCCcEEcccc--cccCC------CCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 208 RKGLAILYRSKDFVHWIKAKHP--LHSVK------GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 208 ~~G~i~ly~S~Dl~~W~~~~~~--l~~~~------~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
..+.|.+.+.+|. |+..+++ +..+. .....|-|-+++.+ | +++|++|...
T Consensus 159 ~~~~i~i~~l~~~--~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~--G-------------~YYL~ys~~g 216 (468)
T 3akh_A 159 NNTSLFIAKMANP--WTISGTPTEISQPTLSWETVGYKVNEGPAVIQHG--G-------------KVFLTYSASA 216 (468)
T ss_dssp SSBEEEEEEEEET--TEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCCcEEEEEeCCC--ceecCccEEecCCCcccccCCCccccCCEEEEEC--C-------------EEEEEEEeCC
Confidence 2345777777663 6654432 22221 12468999999986 5 7888888653
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=7.2e-09 Score=109.29 Aligned_cols=171 Identities=9% Similarity=0.012 Sum_probs=104.8
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC---C---------ccCCCeEeee
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ---Q---------SDINGCWSGS 122 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~---~---------~D~~gv~SGs 122 (428)
.|+.-||. ++.++|+|+||-..... ...+....|+||+||+..+.+|.... . ....++|.++
T Consensus 14 ~g~~~DP~-iir~~~~YY~~~st~~~-----~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~WAP~ 87 (542)
T 3zxk_A 14 WEDHPALE-VFRVGSVFYYSSSTFAY-----SPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGAYVKGIWAST 87 (542)
T ss_dssp CSCCCSCE-EEEETTEEEEECCCBTE-----ESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTTTTCSBCSCE
T ss_pred CCCCCCCe-EEEECCEEEEEEecCcc-----CCCeEEEEcCCCCCccccccccccCCccccccccCCcccccCCceECCc
Confidence 35678995 78899999998542211 12577889999999999887764321 1 1246899999
Q ss_pred EEEcC-CCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCC--CCCCCCCCccCCeEEEECCCCeEE
Q 014220 123 ATILP-GEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDA--MNQINTSSFRDPTTAWLGPDKRWR 199 (428)
Q Consensus 123 av~~~-dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~--~~~~~~~~~RDP~V~~~~~~g~y~ 199 (428)
+...+ +|++||+|+.. ..+.+|+|++..++ | +. ++|++.+.. .+..-.....||.+++ +++|+.|
T Consensus 88 i~~~~~~G~fYly~~~~-----~~~~v~~a~~p~GP----f-~~-g~~l~~~~~ws~~~~~~~~~iDp~~f~-DdDG~~Y 155 (542)
T 3zxk_A 88 LRYRRSNDRFYWYGCVE-----GRTYLWTSPGGNAL----A-NN-GEVPPSAWNWQHTATIDNCYYDAGLLI-DDDDTMY 155 (542)
T ss_dssp EEEETTTTEEEEEEEET-----TEEEEEEEECTTGG----G-TT-TCCCGGGCCCEEEEEESSCCTTCEEEE-CTTSCEE
T ss_pred EEEECCCCEEEEEEECC-----CcEEEEEECCCCCC----c-cc-cccccccCccccccccCCCCCCCcEEE-cCCCCEE
Confidence 87642 49999999863 45788998876543 1 11 222221100 0000012346999654 5789999
Q ss_pred EEEeeecCCccEEEEEE-eCCCCCcEEcccccccCCCCCeeecCceEEec
Q 014220 200 VIIGSKINRKGLAILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 200 Mv~ga~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (428)
|++|. +.|.+.+ ++|+..=.-....+.....+...|-|-+++.+
T Consensus 156 l~~g~-----~~i~~~eL~~d~~~~~~~~~~i~~~~~g~~~EgP~i~k~~ 200 (542)
T 3zxk_A 156 IAYGN-----PTINVAQLSPDGTRQVRVQQRVYAHPQGQTVEGARMYKIR 200 (542)
T ss_dssp EEECS-----SSEEEEEECTTSSSEEEEEEEEECCTTCCCCEEEEEEEET
T ss_pred EEEcC-----CCEEEEEeCCccCcccCCcEEEEeCCCCccccccEEEEEC
Confidence 99974 2344554 45654322111113332233478999999987
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.55 E-value=2.4e-06 Score=83.54 Aligned_cols=152 Identities=10% Similarity=0.014 Sum_probs=95.2
Q ss_pred ccCCcceEEE----CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCC-CCCCCCCccCCCeEeeeEEEcC-CCc
Q 014220 58 INDPNGVMIY----KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDP-AIYPSQQSDINGCWSGSATILP-GEK 130 (428)
Q Consensus 58 ~nDPng~~~~----~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~-al~P~~~~D~~gv~SGsav~~~-dg~ 130 (428)
+..|. +++. +|+|+|||..+.... +....+.|+|+|.. .|++.+. .+.+... ....+..++++.++ ||+
T Consensus 77 ~wAP~-v~~~~~~~~Gkyylyyt~~~~~~--~~~~i~va~s~~p~Gpw~~~~~p~~~~~~~-g~~~~iDp~vf~dd~dG~ 152 (311)
T 3qz4_A 77 AWAPC-IEEKKIDGKYKYFFYYSANPTTN--KGKQIGVAVADSPTGPFTDLGKPIITSSPT-GRGQQIDVDVFTDPVSGK 152 (311)
T ss_dssp EEEEE-EEEEEETTEEEEEEEEEEEETTC--SSCEEEEEEESSTTCCCEECSSCSBCSCTT-SSSBSCCCEEEECTTTCC
T ss_pred cCCCe-eEEeeecCCCEEEEEEEeccCCC--CCeeEEEEEECCCCCCceECCcceEcCCCC-CCcccccccEEEECCCCc
Confidence 45674 6788 999999999765432 24679999999986 8998763 3433211 11345678988876 899
Q ss_pred eEEEEcccCCCCcceEEEEE-EcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCc
Q 014220 131 PAIFYTGIDPHNRQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (428)
Q Consensus 131 ~~l~YTg~~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~ 209 (428)
++|+|.+. .+.++. +.| +.++... ...++.+...+........-|+++ + .+|+|||++++.....
T Consensus 153 ~yl~~g~~------~i~~~~l~~d-----~~~~~~~-~~~i~~~~~~~~~~~~~~EgP~i~-k-~~g~YyL~~s~~~~~~ 218 (311)
T 3qz4_A 153 SYLYWGNG------YMAGAELNDD-----MLSIKEE-TTVVLTPKGGTLQTYAYREAPYVI-Y-RKGIYYFFWSVDDTGS 218 (311)
T ss_dssp EEEEECBS------SCEEEEBCTT-----SSSBCGG-GCEECCCCCCCTTTTCCCEEEEEE-E-ETTEEEEEEEESCTTS
T ss_pred EEEEEcCC------CEEEEEeCCc-----ccccCCC-ceEEeCCCCCcccccceeeccEEE-E-ECCEEEEEEEcCCCCC
Confidence 99999751 123443 333 2455432 123333220000011245779864 4 4899999998764222
Q ss_pred --cEEEEEEeCCCCC-cEEcc
Q 014220 210 --GLAILYRSKDFVH-WIKAK 227 (428)
Q Consensus 210 --G~i~ly~S~Dl~~-W~~~~ 227 (428)
-++.+++|+++.. |+..+
T Consensus 219 ~~y~~~~~~S~~~~GPw~~~~ 239 (311)
T 3qz4_A 219 PNYHVVYGTAQSPLGPIEVAK 239 (311)
T ss_dssp TTCEEEEEEESSTTCCCEEEE
T ss_pred CCceEEEEEcCCCCCCCEeCC
Confidence 2688999999874 98764
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.1e-05 Score=78.67 Aligned_cols=149 Identities=17% Similarity=0.178 Sum_probs=93.5
Q ss_pred ccCCcceEEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCC-CCCCCCCccCCCeEeeeEEEcCCCceEE
Q 014220 58 INDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDP-AIYPSQQSDINGCWSGSATILPGEKPAI 133 (428)
Q Consensus 58 ~nDPng~~~~--~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~-al~P~~~~D~~gv~SGsav~~~dg~~~l 133 (428)
+..|. +++. +|+|||||..+ .+.+.|+|+|.. .|++... .+.. .....++++.++||+++|
T Consensus 79 ~wAP~-v~~~~~~g~~yl~yt~~--------~~i~va~s~~p~Gpw~~~~~~p~~~------~~~iDp~vf~D~dG~~Yl 143 (306)
T 3kst_A 79 FWAPE-VYYVESKKKFYLFYSAE--------EHICVATSTTPEGPFRQEVKQPIWS------EKSIDTSLFIDDDGTPYL 143 (306)
T ss_dssp CEEEE-EEEETTTTEEEEEEEET--------TEEEEEEESSTTCCCBCSSCCCSSS------SCCEEEEEEECTTSCEEE
T ss_pred cccCe-EEEECCCCEEEEEEECC--------CcEEEEEcCCCCCCcEeCCCccccC------CCcccceEEEeCCCCEEE
Confidence 45663 5577 99999999875 268999999986 8997532 1221 345679998877899999
Q ss_pred EEcccCCCCcceEEEEE-EcCCCCCccceeEecCCCceecCCCCCCC---CCCCccCCeEEEECCCCeEEEEEeeec--C
Q 014220 134 FYTGIDPHNRQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQI---NTSSFRDPTTAWLGPDKRWRVIIGSKI--N 207 (428)
Q Consensus 134 ~YTg~~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~nPvi~~~~~~~~---~~~~~RDP~V~~~~~~g~y~Mv~ga~~--~ 207 (428)
+|.... ..+.+.++. +.| +.+|.......++.+. ..+ ....+.-|.++ + .+|+|||++++.. .
T Consensus 144 ~~~~~~--~g~~i~~~~ls~d-----~~~~~~~~~~~~~~~~--~~w~~~~~~~~EgP~i~-k-~~G~YYL~~S~~~~~~ 212 (306)
T 3kst_A 144 YFVRFT--DGNVIWVAQMTDD-----LMSIKTETLNQCIKAE--VSWELLQGKVAEGPSLL-K-KNGVYYLIYSANHYEN 212 (306)
T ss_dssp EEEEES--SSEEEEEEEBCTT-----SSCBCGGGCEEEECCC--SGGGCSSSSBEEEEEEE-E-ETTEEEEEEEESCTTS
T ss_pred EEEEeC--CCCEEEEEEeCcc-----cccccCcceeeeccCC--ccceecCCCceecceEE-E-ECCEEEEEEEeCCCCC
Confidence 997532 122344443 333 3556533222233222 111 12345678854 4 4899999997653 2
Q ss_pred CccEEEEEEeCCCC-CcEE-ccccccc
Q 014220 208 RKGLAILYRSKDFV-HWIK-AKHPLHS 232 (428)
Q Consensus 208 ~~G~i~ly~S~Dl~-~W~~-~~~~l~~ 232 (428)
..-++.+++|+++. .|+. .++|+..
T Consensus 213 ~~y~v~~a~S~s~~GPw~~~~~~pil~ 239 (306)
T 3kst_A 213 KGYGVGYATSDTPMGPWVKYSKNPLLQ 239 (306)
T ss_dssp TTCEEEEEEESSTTCCCEECTTCCSBS
T ss_pred CCceEEEEEeCCCCCCCEeCCCCeeEe
Confidence 22368899999987 6987 4456554
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=98.39 E-value=3.9e-06 Score=81.09 Aligned_cols=156 Identities=15% Similarity=0.193 Sum_probs=96.3
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC--CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEE
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI--NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv--~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l 133 (428)
+-+..|. +++++|+|||||..+..+. .....++|+|+|+. .|++.+..|..... +...+..+++++++||+.+|
T Consensus 71 ~~~wAP~-v~~~~G~yylyyt~~~~~~--~~~~i~va~s~~p~~Gpw~~~~~~l~~~~~-~~~~~iDp~vf~d~dG~~Yl 146 (293)
T 1uv4_A 71 QNQWAPD-IQYYNGKYWLYYSVSSFGS--NTSAIGLASSTSISSGGWKDEGLVIRSTSS-NNYNAIDPELTFDKDGNPWL 146 (293)
T ss_dssp SBCEEEE-EEEETTEEEEEEEECCTTC--SCEEEEEEEESCTTTTCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEE
T ss_pred Cceecce-EEEECCEEEEEEEecCCCC--CcceEEEEECCCCCCCCCccCCccEecCCC-CCCCCCCCCeEECCCCCEEE
Confidence 3466784 6788999999999765432 34678999999997 89987544432211 12245578888777899999
Q ss_pred EEcccCCCCcceEEEEEE-cCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-----C
Q 014220 134 FYTGIDPHNRQVQNLAVP-KNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----N 207 (428)
Q Consensus 134 ~YTg~~~~~~~~q~lA~S-~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-----~ 207 (428)
+|.+.. ..+.++.. .|. .++... ...++..+ . ....+.-|.++ + .+|+|||++.+.. +
T Consensus 147 ~~g~~~----~~i~~~~l~~d~-----~~~~g~-~~~i~~~~--~--~~~~~EgP~i~-k-~~g~yyL~~s~~~~~~g~~ 210 (293)
T 1uv4_A 147 AFGSFW----SGIKLTKLDKST-----MKPTGS-LYSIAARP--N--NGGALEAPTLT-Y-QNGYYYLMVSFDKCCDGVN 210 (293)
T ss_dssp EECBST----TCEEEEEECTTT-----CSEEEE-EEEEECCT--T--TTTCEEEEEEE-E-ETTEEEEEEEEECSSSSSC
T ss_pred EEEecC----CCEEEEEECchh-----CccCCc-ceEEeecC--C--CCCccCccEEE-E-ECCEEEEEEEeCCCcCCCC
Confidence 997532 22444433 332 222211 01133222 1 12346789864 4 4899999998752 2
Q ss_pred CccEEEEEEeCCCC-CcEEc-ccccc
Q 014220 208 RKGLAILYRSKDFV-HWIKA-KHPLH 231 (428)
Q Consensus 208 ~~G~i~ly~S~Dl~-~W~~~-~~~l~ 231 (428)
..-++.+++|+++. -|+.. +.++.
T Consensus 211 ~~y~~~~~~s~~~~GP~~~~~~~p~~ 236 (293)
T 1uv4_A 211 STYKIAYGRSKSITGPYLDKSGKSML 236 (293)
T ss_dssp CEEEEEEEEESSTTCCCBCTTSCBGG
T ss_pred CcceEEEEEeCCCCCCCCccCCCeee
Confidence 22358899999876 57754 44443
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=98.22 E-value=2.4e-05 Score=76.46 Aligned_cols=164 Identities=14% Similarity=0.194 Sum_probs=96.7
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC--C-C---CccCCCCCCCCCCccCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL--I-N---WIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dl--v-~---W~~~~~al~P~~~~D~~gv~SGsav~~~dg 129 (428)
+-+..|. +++++|+|||||..+..+. .....++|+|+++ . . |++.+..+.+....+...+..+++++++||
T Consensus 62 ~~~wAP~-v~~~~g~~ylyyt~~~~~~--~~~~igva~s~~~dp~gp~~~w~~~~~v~~~~~~~~~~~~iDp~vf~D~dG 138 (318)
T 1gyh_A 62 GHLWAPD-IYQHKGLFYLYYSVSAFGK--NTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHG 138 (318)
T ss_dssp SEEEEEE-EEEETTEEEEEEEECCTTS--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTS
T ss_pred cccccCe-EEEECCEEEEEEEeccCCC--CcceEEEEEeCCCCCCCCCcceecCCcccccCCCCCCCCcccCCeEECCCC
Confidence 3456774 6788999999999765432 2467899999984 2 3 998765443322222234567888887789
Q ss_pred ceEEEEcccCCCCcceEEEEEE-cCCC-CCccceeEecCC--Cce-ecCCCCCCCCCCCccCCeEEEECCCCeEEEEEee
Q 014220 130 KPAIFYTGIDPHNRQVQNLAVP-KNLS-DPYLREWVKSPK--NPL-MAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 130 ~~~l~YTg~~~~~~~~q~lA~S-~D~~-d~~l~~w~k~~~--nPv-i~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
+.+|+|.+.. ..+.++.. .|.. ...+..|+.... .++ +... ......+.-|.++ + .+|+|||++.+
T Consensus 139 ~~Yl~~g~~~----~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~---~~~~~~~EgP~i~-k-~~g~yYL~~s~ 209 (318)
T 1gyh_A 139 QVWMSFGSFW----GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDS---QAGSAQIEAPFIL-R-KGDYYYLFASW 209 (318)
T ss_dssp CEEEEECBST----TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTT---SCCSCCEEEEEEE-E-ETTEEEEEEEE
T ss_pred CEEEEeeccC----CCEEEEEeCCccccccceeecceecccCcceeeccc---CCCCcceeccEEE-E-ECCEEEEEEEe
Confidence 9999997642 12344432 3310 001245654211 111 1111 1122346788864 4 48999999876
Q ss_pred ec-----CCccEEEEEEeCCCC-CcEEc-ccccc
Q 014220 205 KI-----NRKGLAILYRSKDFV-HWIKA-KHPLH 231 (428)
Q Consensus 205 ~~-----~~~G~i~ly~S~Dl~-~W~~~-~~~l~ 231 (428)
.. ...-++.+++|+++. -|+.. +.++.
T Consensus 210 ~~~~~g~~~~y~~~~~rS~s~~GP~~~~~g~p~~ 243 (318)
T 1gyh_A 210 GLCCRKGDSTYHLVVGRSKQVTGPYLDKTGRDMN 243 (318)
T ss_dssp SCCSCGGGCCCEEEEEEESSTTSCCBCTTSBBGG
T ss_pred CCCcCCCCCcceEEEEEcCCCCCCCCcCCCCEee
Confidence 41 222368899999876 57764 44544
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=98.17 E-value=6.6e-05 Score=73.17 Aligned_cols=158 Identities=16% Similarity=0.221 Sum_probs=93.7
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC---C---CccCCCCCCCCCCccCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI---N---WIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv---~---W~~~~~al~P~~~~D~~gv~SGsav~~~dg 129 (428)
+-+..|. +++++|+|||||..+..+. .....++|+|+|+- . |++.+..+.... .+...+..++++.++||
T Consensus 80 ~~~wAP~-v~~~~g~yylyyt~~~~~~--~~~~igva~s~~~dP~gp~~~w~~~~~~~~~~~-~~~~~~iDp~vf~D~dG 155 (314)
T 3cu9_A 80 DHLWAPD-ICFYNGIYYLYYSVSTFGK--NTSVIGLATNQTLDPRDPDYEWKDMGPVIHSTA-SDNYNAIDPNVVFDQEG 155 (314)
T ss_dssp CEEEEEE-EEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECT-TSSSCCCSCEEEECTTS
T ss_pred CceecCc-EEEECCEEEEEEEeccCCC--CCceEEEEEeCCCCCCCCCcCcccCCeEecCCC-CCCCCccCCCeEEcCCC
Confidence 4466774 6788999999999765432 24678999999852 3 998754333211 11223557888887789
Q ss_pred ceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCce-ecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec--
Q 014220 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPL-MAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-- 206 (428)
Q Consensus 130 ~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPv-i~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-- 206 (428)
+.+|+|.+.. ..+.++...+.. ..... ...++ +... +.....+.-|.++ + .+|+|||++.+..
T Consensus 156 ~~Yl~~g~~~----~~i~~~~l~~d~----~~~~~-~~~~~~~~~~---~~~~~~~EgP~i~-k-~~G~yyL~~s~~~~~ 221 (314)
T 3cu9_A 156 QPWLSFGSFW----SGIQLIQLDTET----MKPAA-QAELLTIASR---GEEPNAIEAPFIV-C-RNGYYYLFVSFDFCC 221 (314)
T ss_dssp CEEEEECBST----TCEEEEECCTTT----CSCCT-TCCCEEEECC---SSSSCCEEEEEEE-E-ETTEEEEEEEESCCS
T ss_pred CEEEEEeccC----CcEEEEEECccc----CcccC-CCceEEeccc---CCCCCccCccEEE-E-ECCEEEEEEEcCCcc
Confidence 9999998743 123444332211 01010 01111 2111 0112346789864 4 4899999987641
Q ss_pred ---CCccEEEEEEeCCCC-CcEEc-ccccc
Q 014220 207 ---NRKGLAILYRSKDFV-HWIKA-KHPLH 231 (428)
Q Consensus 207 ---~~~G~i~ly~S~Dl~-~W~~~-~~~l~ 231 (428)
...-.+.+++|+++. -|+.. +.++.
T Consensus 222 ~g~~~~y~~~~~~s~s~~GP~~~~~~~p~~ 251 (314)
T 3cu9_A 222 RGIESTYKIAVGRSKDITGPYVDKNGVSMM 251 (314)
T ss_dssp SGGGCCCEEEEEEESSTTSCCBCTTSCBGG
T ss_pred cCCCCcceEEEEEeCCCCCCCCcCCCCccc
Confidence 122368899999976 68765 44554
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.3e-05 Score=82.20 Aligned_cols=130 Identities=10% Similarity=0.085 Sum_probs=85.9
Q ss_pred CCcceEEECCEEEEEEeeCCC-CCCC-CCcEEEEEEeCCCCCCcc--CCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 014220 60 DPNGVMIYKGIYHLFYQYNPK-GAVW-GNIVWAHSTSKDLINWIP--HDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~-~~~~-g~~~Wgha~S~Dlv~W~~--~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (428)
.|. ++..+|+|+|||..+.. ...+ .....++|+|+|+.+|++ ..++|.+.......+.-.+.++. .+|+++|++
T Consensus 75 sgs-av~~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~-~dg~~~m~~ 152 (432)
T 1w2t_A 75 SGS-AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVL 152 (432)
T ss_dssp EEE-EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-CSSSEEEEE
T ss_pred eeE-EEEECCEEEEEEecCccCCCCCCceEEEEEEEeCCCCeEEecCCCceEeCCCccccccccCCEEEE-ECCEEEEEE
Confidence 343 44589999999987643 1111 246789999999999998 45666543211123455677765 489999999
Q ss_pred cccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeee
Q 014220 136 TGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (428)
Q Consensus 136 Tg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~ 205 (428)
.+........+.++.|.| |++|+... ++.... . ...+.=|.++ + .+|+|+|+++.+
T Consensus 153 g~~~~~~~g~i~ly~S~D-----l~~W~~~g--~~~~~~--~---g~~~EcP~lf-~-~~g~~vL~~s~~ 208 (432)
T 1w2t_A 153 GSGKDEKIGRVLLYTSDD-----LFHWKYEG--AIFEDE--T---TKEIDCPDLV-R-IGEKDILIYSIT 208 (432)
T ss_dssp EEEETTTEEEEEEEEESS-----SSSCEEEE--EEEEET--T---CSCCEEEEEE-E-ETTEEEEEEEET
T ss_pred EEecCCCCcEEEEEECCC-----CCCceEcc--ccccCC--C---CCEEECCeEE-E-ECCEEEEEEeCC
Confidence 875433445567888877 48998752 444322 1 2347788854 4 478999999865
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=8.6e-05 Score=72.37 Aligned_cols=145 Identities=8% Similarity=-0.052 Sum_probs=90.2
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC-CCCccC-C-CCCCCCC---CccCCCeEeeeEEEcCCCce
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL-INWIPH-D-PAIYPSQ---QSDINGCWSGSATILPGEKP 131 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dl-v~W~~~-~-~al~P~~---~~D~~gv~SGsav~~~dg~~ 131 (428)
+.-|. +++++|+|||||..+..+..+ ....+.|+|+|. -.|++. + +.+.... .........+++++++||+.
T Consensus 75 ~WAP~-i~~~~Gkyylyyt~~~~~~~~-~~~i~va~s~~p~Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf~DddG~~ 152 (307)
T 3qee_A 75 AWASQ-VIERNGKFYWYVTVRHDDTKP-GFAIGVAVGDSPIGPFKDALGKALITNDMTTDTPIDWDDIDPSVFIDDDGQA 152 (307)
T ss_dssp EEEEE-EEEETTEEEEEEEEEECTTSC-SEEEEEEEESSTTCCCEESSSSCSBCGGGCCSSCCSCCSCCCEEEECTTSCE
T ss_pred ccCce-EEEECCEEEEEEEeccCCCCC-ceEEEEEEECCCCCCCEeCCCCeeEecCccccCCCCcCcccCceEECCCCCE
Confidence 55674 678999999999977543322 367899999996 489983 3 3333210 00112356788888778999
Q ss_pred EEEEcccCCCCcceEEEE-EEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCcc
Q 014220 132 AIFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210 (428)
Q Consensus 132 ~l~YTg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G 210 (428)
+|+|.+.. ..++ .+.| +.+|.... ..+..+ ...+.-|.+ ++ .+|+|||++++. ..-
T Consensus 153 Yl~~g~~~------i~~~~l~~d-----~~~~~g~~--~~i~~~------~~~~EgP~i-~k-~~g~YyL~~s~~--~~~ 209 (307)
T 3qee_A 153 YLFWGNTR------PRYAKLKKN-----MVELDGPI--RAIEGL------PEFTEAIWV-HK-YQDNYYLSYAMG--FPE 209 (307)
T ss_dssp EEEECSSS------CEEEEECTT-----SSSEEEEE--EECCCC------TTEEEEEEE-EE-CC-CEEEEEEET--TTT
T ss_pred EEEEeCCc------EEEEEECCc-----cccccCce--EEeCCC------CCccCceEE-EE-ECCEEEEEEECC--CCc
Confidence 99997541 2233 3333 34555321 122211 123568885 45 689999999874 234
Q ss_pred EEEEEEeCCCC-CcEEcc
Q 014220 211 LAILYRSKDFV-HWIKAK 227 (428)
Q Consensus 211 ~i~ly~S~Dl~-~W~~~~ 227 (428)
++.+++|+++. -|+..+
T Consensus 210 ~~~~~~s~~~~GP~~~~~ 227 (307)
T 3qee_A 210 KIGYAMGKSIKGPWVYKG 227 (307)
T ss_dssp EEEEEEESSTTCCCEEEE
T ss_pred EEEEEECCCCCCCcEECC
Confidence 67888999987 688754
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00017 Score=74.45 Aligned_cols=161 Identities=11% Similarity=0.145 Sum_probs=98.3
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEE--eCCC--CCCccCCCCCCCCCCccCCCeEeeeEEEcCCCc
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHST--SKDL--INWIPHDPAIYPSQQSDINGCWSGSATILPGEK 130 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~--S~Dl--v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~ 130 (428)
.+-+..|. +++++|+|+|||.....+.. .....+.|+ |+|- -.|++.+..+.|.. ..+..++++. +||+
T Consensus 73 ~~~~WAP~-v~~~~Gkyylyys~~~~~~~-~~~~i~va~~~s~dp~~Gpw~~~g~~~~~~~----~~~IDp~vf~-ddG~ 145 (468)
T 3akh_A 73 GAHIWAPE-IHFIDGKWYVYFAAGSTSDV-WAIRMYVLESGAANPLTGSWTEKGQIATPVS----SFSLDATTFV-VNGV 145 (468)
T ss_dssp CEEEEEEE-EEEETTEEEEEEEEECSSCT-TCCEEEEEEECCSCTTTSCCEEEEECCCSSC----SCEEEEEEEE-ETTE
T ss_pred CCCEecce-EEEECCEEEEEEEeECCCCC-CceeEEEEEccCCCCCCCCCcccceeecCCC----CCcCcCeEEE-ECCE
Confidence 34567884 78899999999987653211 235667775 8886 47998765555422 3467888887 6999
Q ss_pred eEEEEcccCCC--CcceEEEEEEcCCCCCccceeEecCCCce-ecCCCCCCCC---CCCccCCeEEEECCCCeEEEEEee
Q 014220 131 PAIFYTGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPKNPL-MAPDAMNQIN---TSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 131 ~~l~YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~nPv-i~~~~~~~~~---~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
.+|+|.+.... ....+.+|...+. .+.. +.++ |..+. ..++ .....-|+++ + .+|+|||++++
T Consensus 146 ~Yl~~g~~~~~~~~~~~i~i~~l~~~-----~~~~---g~~~~i~~~~-~~we~~g~~~~EGP~i~-k-~~G~YYL~ys~ 214 (468)
T 3akh_A 146 RHLAWAQRNPAEDNNTSLFIAKMANP-----WTIS---GTPTEISQPT-LSWETVGYKVNEGPAVI-Q-HGGKVFLTYSA 214 (468)
T ss_dssp EEEEEEECCTTSSSSBEEEEEEEEET-----TEEE---EEEEEEECCC-SGGGCSSSCBEEEEEEE-E-ETTEEEEEEEE
T ss_pred EEEEEEccCCCCCCCCcEEEEEeCCC-----ceec---CccEEecCCC-cccccCCCccccCCEEE-E-ECCEEEEEEEe
Confidence 99999865321 2244555654432 1222 2232 22220 1111 1235678854 4 48899999876
Q ss_pred ec-CCccEEEEEEeC---CCCC---cEEcccccccC
Q 014220 205 KI-NRKGLAILYRSK---DFVH---WIKAKHPLHSV 233 (428)
Q Consensus 205 ~~-~~~G~i~ly~S~---Dl~~---W~~~~~~l~~~ 233 (428)
.. +..-++.+++|+ ++.. |+..++++...
T Consensus 215 ~g~~~~y~v~~a~s~~~~~~~gP~~w~~~~~pvl~~ 250 (468)
T 3akh_A 215 SATDANYCLGMLSASASADLLNAASWTKSSQPVFKT 250 (468)
T ss_dssp SCSSTTCEEEEEEEETTSCTTSGGGCEECSSCSBCC
T ss_pred CCCCCCceEEEEEECCCCCCCCcHHhccCCceEEEe
Confidence 54 222367888987 6654 98776566543
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00062 Score=71.22 Aligned_cols=155 Identities=11% Similarity=0.096 Sum_probs=94.5
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCC-CCCCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPK-GAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~-~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
.+-+.-|. +++++|+|||||..... +..+.....+.|+|+|.. .|++ ++.+ .. ....++++.++||+.+
T Consensus 69 ~~~~WAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-~~------~~iDp~~f~D~dG~~Y 139 (533)
T 1yif_A 69 SGGVWAPC-LSYSDGKFWLIYTDVKVVDGAWKDCHNYLVTCETINGDWSE-PIKL-NS------SGFDASLFHDTDGKKY 139 (533)
T ss_dssp TCBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEEC-CC------SCSCCEEEECTTSCEE
T ss_pred CCCEECce-EEEECCEEEEEEEeccCCCCCcccccEEEEEeCCCCCCccc-cEEc-CC------CcCCCceEECCCCCEE
Confidence 45578895 78899999999985432 222334678999999986 6986 3323 21 2345888887789999
Q ss_pred EEEcccCC-CC---cceEEEEE-EcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC
Q 014220 133 IFYTGIDP-HN---RQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (428)
Q Consensus 133 l~YTg~~~-~~---~~~q~lA~-S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~ 207 (428)
|+|.+... .+ ...+.++. +.|. .+... +...++... ......-|+++ + .+|+|||++++...
T Consensus 140 l~~~~~~~~~g~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~~~-----~~~~~EgP~i~-k-~~G~YYL~~s~gg~ 206 (533)
T 1yif_A 140 LLNMLWDHRIDRHSFGGIVIQEYSDKE-----QKLIG-KPKVIFEGT-----DRKLTEAPHLY-H-IGNYYYLLTAEGGT 206 (533)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-----TEECS-CCEEEECCC-----TTCCCEEEEEE-E-ETTEEEEEEEESCS
T ss_pred EEEEecccccCCCCCCCEEEEEECCcc-----CCCCC-CcEEEEcCC-----CCCccccceEE-E-ECCEEEEEEeCCCC
Confidence 99975421 11 23344443 3332 11111 112233221 12345788854 4 48999999976532
Q ss_pred C-ccEEEEEEeCCCC-CcEEcc-cccc
Q 014220 208 R-KGLAILYRSKDFV-HWIKAK-HPLH 231 (428)
Q Consensus 208 ~-~G~i~ly~S~Dl~-~W~~~~-~~l~ 231 (428)
+ .-.+.+++|+++. -|+... +|+.
T Consensus 207 ~~~~~v~~~rs~s~~GP~~~~~~~pil 233 (533)
T 1yif_A 207 RYEHAATIARSANIEGPYEVHPDNPIL 233 (533)
T ss_dssp STTCEEEEEEESSTTCCCEECTTCCSE
T ss_pred CCCeEEEEEEECCCCceeeeCCCCceE
Confidence 2 2268899999876 688753 3444
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0005 Score=72.07 Aligned_cols=155 Identities=15% Similarity=0.113 Sum_probs=94.1
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCC-CCCCCCcEEEEEEeCCCCC-CccCCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPK-GAVWGNIVWAHSTSKDLIN-WIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~-~~~~g~~~Wgha~S~Dlv~-W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
.+-+.-|. ++|++|+|+|||..... +..+.....+.|+|+|... |++ +..+ .. ....++++.++||+.+
T Consensus 69 ~~~~WAP~-i~~~~g~~yly~t~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-~~------~~iDp~~f~DddG~~Y 139 (538)
T 3c2u_A 69 SGGIWAPD-LSYADGKFWLIYTDVKVVDGMWKDCHNYLTTAEDIKGPWSK-PILL-NG------AGFDASLFHDPSGKKY 139 (538)
T ss_dssp TCEECSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTCCCCC-CEEE-EC------SCSCCEEEECTTSCEE
T ss_pred CCCEECCe-EEEECCEEEEEEEeccCCCCCcccccEEEEEECCCCCCccc-cEec-CC------CcCCCeeEECCCCCEE
Confidence 45577885 78899999999985432 2223346788999999874 986 2222 11 2346888887789999
Q ss_pred EEEcccCCC----CcceEEEEE-EcCCCCCccceeEecCC-CceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec
Q 014220 133 IFYTGIDPH----NRQVQNLAV-PKNLSDPYLREWVKSPK-NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (428)
Q Consensus 133 l~YTg~~~~----~~~~q~lA~-S~D~~d~~l~~w~k~~~-nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~ 206 (428)
|+|...... ....+.++. +.|. ++-... ..|..+. ......-|++ ++ .+|+|||++++..
T Consensus 140 l~~~~~~~~~~~~~~~~i~~~~l~~d~-------~~~~g~~~~i~~~~-----~~~~~EgP~i-~k-~~G~YYL~~s~gg 205 (538)
T 3c2u_A 140 LVNMYWDQRVYHHNFYGIALQEYSVAE-------EKLIGKPEIIYKGT-----DIAYTEGPHL-YY-INDMYYLMTAEGG 205 (538)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-------TEECSCCEEEECCC-----TTCCCEEEEE-EE-ETTEEEEEEEESC
T ss_pred EEEEecCCccCCCCCCCEEEEEECCcc-------CCCCCCCEEEecCC-----CCCccccceE-EE-ECCEEEEEEecCC
Confidence 999754211 123344443 3331 121111 1222221 1234678985 45 4899999997653
Q ss_pred CCc-cEEEEEEeCCCC-CcEEcc-ccccc
Q 014220 207 NRK-GLAILYRSKDFV-HWIKAK-HPLHS 232 (428)
Q Consensus 207 ~~~-G~i~ly~S~Dl~-~W~~~~-~~l~~ 232 (428)
.+. -++.+++|+++. -|+... +|+..
T Consensus 206 ~~~~~~~~~~rS~s~~GP~~~~~~~pil~ 234 (538)
T 3c2u_A 206 TTYQHSETIARSKTIHGPYEIQPDYPLLS 234 (538)
T ss_dssp SSTTCEEEEEEESSTTCCCEECTTCCSBC
T ss_pred CCCCeEEEEEEECCCCCCCccCCCCceEe
Confidence 222 268899999987 688753 34443
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00039 Score=72.66 Aligned_cols=155 Identities=12% Similarity=0.076 Sum_probs=93.3
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCC-CCCCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPK-GAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~-~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
.+-+..|. +++++|+|||||..... +..+...+.+.|+|+|.. .|++ +..+ . .....++++.++||+.+
T Consensus 71 ~~~~wAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-~------~~~iDp~vf~D~dG~~Y 141 (528)
T 1yrz_A 71 SGGIWAPC-LSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQNIEGPWSD-PIYL-N------SSGFDPSLFHDDDGRKW 141 (528)
T ss_dssp TCEECSCE-EEEETTEEEEEEEEEEECSSSCCEEEEEEEEESSSSSCCCC-CEEC-C------CSCSCCEEEECTTSCEE
T ss_pred CCCEECCe-EEEECCEEEEEEecccCCCCCcccceEEEEEeCCCCCCccc-cEEC-C------CCcCCCceEECCCCCEE
Confidence 34577885 78899999999985421 222234568899999987 5986 2223 1 23456888887789999
Q ss_pred EEEcccCC-C---CcceEEEEE-EcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC
Q 014220 133 IFYTGIDP-H---NRQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (428)
Q Consensus 133 l~YTg~~~-~---~~~~q~lA~-S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~ 207 (428)
|+|..+.. . ....+.++. +.|. .+.... ...++... ....+.-|.+ ++ .+|+|||++.+...
T Consensus 142 l~~~~~~~~~~~~~~~~i~~~~l~~d~-----~~~~g~-~~~i~~~~-----~~~~~EgP~i-~k-~~G~YYL~~s~~g~ 208 (528)
T 1yrz_A 142 LVNMIWDYRKGNHPFAGIILQEYSEAE-----QKLVGP-VKNIYKGT-----DIQLTEGPHL-YK-KDGYYYLLVAEGGT 208 (528)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT-----TEEEEE-EEEEECCC-----TTCCCEEEEE-EE-ETTEEEEEEEESCS
T ss_pred EEEeeccCCCCCCCCCeEEEEEECCcc-----CCCCCC-CEEEEcCC-----CCCccCCCEE-EE-ECCEEEEEEeCCCC
Confidence 99553321 1 123344554 3332 122211 11233221 1234678985 45 48999999986532
Q ss_pred C-ccEEEEEEeCCCC-CcEEcc-cccc
Q 014220 208 R-KGLAILYRSKDFV-HWIKAK-HPLH 231 (428)
Q Consensus 208 ~-~G~i~ly~S~Dl~-~W~~~~-~~l~ 231 (428)
+ .-.+.+++|+++. .|+... +++.
T Consensus 209 ~~~~~~~~~rs~~~~GP~~~~~~~pil 235 (528)
T 1yrz_A 209 EYEHAATLARSQSIDGPYETDPSYPLV 235 (528)
T ss_dssp STTCEEEEEEESSTTCCCEECTTCCSE
T ss_pred CCCcEEEEEEECCCCCCCCcCCCCeEE
Confidence 2 2357899999987 698753 3444
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=6.8e-05 Score=78.68 Aligned_cols=137 Identities=16% Similarity=0.205 Sum_probs=89.9
Q ss_pred eCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCce
Q 014220 94 SKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPL 170 (428)
Q Consensus 94 S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPv 170 (428)
|.++.+|.+..--+.|...|= =.+..++..+|+|+|||.-+... +...-++|+|+| |.||+..+ ++
T Consensus 11 ~~~~~~~~Rp~yH~~P~~gwm----NDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~D-----LvhW~~~p--~A 79 (546)
T 3ugf_A 11 SNAQLSWQRTAFHFQPERSWM----SDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRD-----LIHWLYLP--LA 79 (546)
T ss_dssp CHHHHHHTSCSSSCCCSSEEE----EEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESS-----SSSCEECC--CC
T ss_pred chhhhhhcCCeEEEeCCCCCc----cCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCC-----cCccccCC--CC
Confidence 567888888777777765431 12443444589999999865322 345678999998 58999863 66
Q ss_pred ecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC-CccEEEEEEeCCC-----CCcEEcc-cccccCCC---CCeee
Q 014220 171 MAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGLAILYRSKDF-----VHWIKAK-HPLHSVKG---TGMWE 240 (428)
Q Consensus 171 i~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~-~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~~---~~~wE 240 (428)
|.|. ..++....-.+.++. .++|+++|++.+... ..-...++.|+|+ .+|+... +|+..... ...+.
T Consensus 80 L~P~--~~~D~~G~~SGSavv-~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fR 156 (546)
T 3ugf_A 80 LAAD--QWYDMQGVFSGSATC-LPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFR 156 (546)
T ss_dssp BCSC--SGGGTTCEEEEEEEE-CTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCC
T ss_pred CCCC--cccccCCcCcceEEE-eeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceee
Confidence 7655 333444555666543 368899999987653 2345678899886 8999864 46554322 13577
Q ss_pred cCce
Q 014220 241 CPDF 244 (428)
Q Consensus 241 CPdl 244 (428)
-|.+
T Consensus 157 DPkV 160 (546)
T 3ugf_A 157 DAST 160 (546)
T ss_dssp CBCC
T ss_pred ccce
Confidence 7874
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00022 Score=74.74 Aligned_cols=169 Identities=13% Similarity=0.022 Sum_probs=99.6
Q ss_pred ccCCcceEEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCC--CCCCCCC----ccCCCeEeeeEEEcCC
Q 014220 58 INDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDP--AIYPSQQ----SDINGCWSGSATILPG 128 (428)
Q Consensus 58 ~nDPng~~~~--~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~--al~P~~~----~D~~gv~SGsav~~~d 128 (428)
+.-|. ++|+ +|+|||||.... +...+....+.|+|+|.. .|++.+. .+..... .+...+..+++++++|
T Consensus 117 ~WAP~-v~~~~~~Gkyymy~~~~~-~~~~~~~~igvats~~p~Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~vf~D~d 194 (526)
T 3vsf_A 117 IERPK-VMYNASTGEFVMWMHWEN-GINYGQARAAVAYSKTPDGKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNVFVDTD 194 (526)
T ss_dssp EEEEE-EEECTTTCCEEEEEEEEC-SSCSCCCEEEEEEESSSSSCCEEEEEECSSCTTCCEETTEESCCCCSEEEEECTT
T ss_pred eECCE-EEEECCCCEEEEEEEeeC-CCCCCcceEEEEEcCCCCCCCEeccccccccccccccCCCCCcccccccEEECCC
Confidence 55663 6665 899999998762 223345789999999987 7986532 1111111 1123456788888789
Q ss_pred CceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCC
Q 014220 129 EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (428)
Q Consensus 129 g~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~ 208 (428)
|+.+|+|.+... ..+.++.-.+. +.++... +...-+ ......|++ ++ .+|+|||++.+....
T Consensus 195 G~~Yl~~~~~~~---~~i~i~~l~~d----~~~~~~~---~~~~~~------g~~~EgP~i-~k-~~G~YYL~~S~~tg~ 256 (526)
T 3vsf_A 195 GKGYFISAANEN---MDLHLYELTPD----YKNIASL---KAKLFV------GQQREAPCL-IK-RNGYYYLITSGCTGW 256 (526)
T ss_dssp SCEEEEEEETTT---TEEEEEEECTT----SSSEEEE---EEEEST------TSCCEEEEE-EE-SSSCEEEEEECCCTT
T ss_pred CCEEEEEEecCC---CceEEEEcCCC----cccccCc---eEEeCC------CCCcCCeEE-EE-ECCEEEEEEcCCCCc
Confidence 999999976421 23344433221 2333321 111111 134578995 55 589999999643321
Q ss_pred -ccEEEEEEeCCCC-CcEEcccccccCCCCCeeecCceEEec
Q 014220 209 -KGLAILYRSKDFV-HWIKAKHPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 209 -~G~i~ly~S~Dl~-~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (428)
.-.+.+++|+++. -|+..+.+. ......-....+++++
T Consensus 257 ~~~~~~~a~S~s~~GPw~~~~~~~--~~~~~~~q~~~v~~~~ 296 (526)
T 3vsf_A 257 NPNQAKYAYSKDLASGWSQLYNLG--NSTTYRSQPTFIIPVQ 296 (526)
T ss_dssp SCCCEEECEESCSSSCCCCCEEES--STTTTTCEEEEEEEEE
T ss_pred CCCceEEEEeCCCCCCceeCCccC--CCCccCCCCeeEEEec
Confidence 2257889999876 587765443 2223334555666665
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00021 Score=74.13 Aligned_cols=149 Identities=13% Similarity=0.133 Sum_probs=90.9
Q ss_pred ccCCcceEEE--C--CEEEEEEeeCCCCCCCCCcEEEEEEeCCCCC-CccC-C-CCCCCCC-Ccc-CCCeEeeeEEEcCC
Q 014220 58 INDPNGVMIY--K--GIYHLFYQYNPKGAVWGNIVWAHSTSKDLIN-WIPH-D-PAIYPSQ-QSD-INGCWSGSATILPG 128 (428)
Q Consensus 58 ~nDPng~~~~--~--G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~-W~~~-~-~al~P~~-~~D-~~gv~SGsav~~~d 128 (428)
+..|. ++++ + |+|||||... ....+.|+|+|... |++. + +.+.++. ..+ ......+++++++|
T Consensus 100 ~WAP~-v~~~~~~g~g~yylyyt~~-------~~~i~va~s~~p~Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~Ddd 171 (487)
T 3c7f_A 100 SWAPS-IAVKKINGKDKFFLYFANS-------GGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDDD 171 (487)
T ss_dssp CEEEE-EEEEEETTEEEEEEEEEST-------TBCEEEEEESSTTCCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEECTT
T ss_pred Ccchh-eEEEecCCCCeEEEEEEcC-------CcEEEEEEeCCCCCCcccCCCCeEeecCCCCccCCCCccCCceEEcCC
Confidence 56674 5665 4 6999999643 24689999999985 9975 3 2333221 111 12356799988878
Q ss_pred CceEEEEcccCCC----------CcceEEEE-EEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCe
Q 014220 129 EKPAIFYTGIDPH----------NRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (428)
Q Consensus 129 g~~~l~YTg~~~~----------~~~~q~lA-~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~ 197 (428)
|+.+|+|.+.... ......++ .+.| +.+|.... ..+..+ ..+.-|.+ ++ .+|+
T Consensus 172 G~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d-----~~~~~g~~--~~i~~p-------~~~Egp~i-~k-~~G~ 235 (487)
T 3c7f_A 172 GTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPD-----MTSVVGSA--STIDAP-------FMFEDSGL-HK-YNGT 235 (487)
T ss_dssp SCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTT-----SSSEEEEE--EEECCT-------TEEEEEEE-EE-ETTE
T ss_pred CCEEEEECCcccCccccccccccCCCceEEEEECCC-----eeeccCcc--EEecCC-------ceEecceE-EE-ECCE
Confidence 9999999763211 11233444 3433 35676421 122222 23567885 44 4899
Q ss_pred EEEEEeeec--C-----CccEEEEEEeCCCC-CcEEccccc
Q 014220 198 WRVIIGSKI--N-----RKGLAILYRSKDFV-HWIKAKHPL 230 (428)
Q Consensus 198 y~Mv~ga~~--~-----~~G~i~ly~S~Dl~-~W~~~~~~l 230 (428)
|||++++.. . ....+.+++|+++. -|++.+.++
T Consensus 236 YYl~ys~~~~~t~~~~~~~~~i~~~~S~s~~GP~~~~~~il 276 (487)
T 3c7f_A 236 YYYSYCINFGGTHPADKPPGEIGYMTSSSPMGPFTYRGHFL 276 (487)
T ss_dssp EEEEEEECSSSCCCTTSCTTSEEEEEESSTTCCCEEEEEEE
T ss_pred EEEEEECCCCCCcccCCCCceeEEEEcCCCCCCceECceec
Confidence 999887642 1 12468889999876 698764333
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00028 Score=72.91 Aligned_cols=161 Identities=10% Similarity=0.030 Sum_probs=95.5
Q ss_pred CCccCCcceEE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCCCCCCC--------CCcc---CCCeEeee
Q 014220 56 NWINDPNGVMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPS--------QQSD---INGCWSGS 122 (428)
Q Consensus 56 gw~nDPng~~~-~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~--------~~~D---~~gv~SGs 122 (428)
+-+..|. +++ .+|+|||||.....+. .....++|+|+|.. .|++.+..|... ..|+ ...+..++
T Consensus 97 ~~~WAP~-vi~~~dGkyylyys~~~~~~--~~~~IgvatSddp~GPw~~~g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~ 173 (470)
T 2x8s_A 97 DTLWAAD-VTQLADGKYYMYYNACRGDS--PRSAMGVAVADNIEGPYKNKGIFLKSGMEGTSSDGTPYDATKHPNVVAPH 173 (470)
T ss_dssp SSCCCCE-EEECTTSCEEEEEEEECSSS--CCEEEEEEEESSTTCCCEEEEEEEEECCSSBCTTSSBCCTTTSCCSCCCE
T ss_pred CceECCe-EEEecCCEEEEEEEeccCCC--CccEEEEEEeCCCCCCceeCCeeeccCcccccccccccccccCCCCCCCC
Confidence 3467885 566 4899999998765332 34679999999998 599875444321 1122 23456789
Q ss_pred EEEcCCCceEEEEcccCCCCcceEEEEEE-cCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEE
Q 014220 123 ATILPGEKPAIFYTGIDPHNRQVQNLAVP-KNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVI 201 (428)
Q Consensus 123 av~~~dg~~~l~YTg~~~~~~~~q~lA~S-~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv 201 (428)
+++++||+.+|+|.+... .+.++.. .|.+.+ ..+... ...+... ......-|+++++..+|.|||+
T Consensus 174 vf~DdDG~~Yl~~g~~~~----gI~~~eL~~d~~~~--~~~~~~-~~~i~~g------~~~~~EGP~i~~~K~~G~YYL~ 240 (470)
T 2x8s_A 174 TFFDKDGKLWMVYGSYSG----GIFILEMNPKTGFP--LPGQGY-GKKLLGG------NHSRIEGPYVLYNPDTQYYYLY 240 (470)
T ss_dssp EEECTTSCEEEEECBSTT----CEEEEEBCTTTSSB--CTTCTT-CEEEECC------SSCSEEEEEEEEETTTTEEEEE
T ss_pred EEEcCCCCEEEEeeecCC----cEEEEEECCccCcC--cCCccc-ceEecCC------CCCceeccEEEEEccCCEEEEE
Confidence 988789999999986531 2333322 221110 001000 1112211 1123567886544468999999
Q ss_pred Eeeec-C--CccEEEEEEeCCCC-CcEE-ccccccc
Q 014220 202 IGSKI-N--RKGLAILYRSKDFV-HWIK-AKHPLHS 232 (428)
Q Consensus 202 ~ga~~-~--~~G~i~ly~S~Dl~-~W~~-~~~~l~~ 232 (428)
+++.. . ..-++.+++|+++. -|+. .+.++..
T Consensus 241 ~S~g~~~~~~~y~v~~arS~s~~GP~~~~~g~pl~~ 276 (470)
T 2x8s_A 241 LSYGGLDATGGYNIRVARSKKPDGPYYDAEGNPMLD 276 (470)
T ss_dssp EEESBSSTTSBCEEEEEEESSTTCCCBCTTCCBGGG
T ss_pred EEeCCCCCCCCceEEEEEECCCCCCCCcCCCCcccc
Confidence 88643 1 12368899999876 5773 3455543
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00034 Score=72.09 Aligned_cols=143 Identities=11% Similarity=0.151 Sum_probs=89.5
Q ss_pred ECCEEEEEEeeCCCCCC-CC------CcEEEEEE-----eCC---CCCCccCCCCCCCCCC-cc------CCCeEeeeEE
Q 014220 67 YKGIYHLFYQYNPKGAV-WG------NIVWAHST-----SKD---LINWIPHDPAIYPSQQ-SD------INGCWSGSAT 124 (428)
Q Consensus 67 ~~G~YHlFYq~~p~~~~-~g------~~~Wgha~-----S~D---lv~W~~~~~al~P~~~-~D------~~gv~SGsav 124 (428)
.+|+|||||........ .| ...++.++ |+| |.+|+++.+.|.+++. |+ ....-.+.++
T Consensus 173 ~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~~~l~~~DG~~Yqt~~q~~~~~fRDP~vf 252 (493)
T 1w18_A 173 HGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAHTPLLQPDGVLYQNGAQNEFFNFRDPFTF 252 (493)
T ss_dssp TSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEEE
T ss_pred CCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccCCceeecCccccccccccCCccccCCEEE
Confidence 58999999986533111 11 23455222 344 6789988877887643 22 2345568888
Q ss_pred EcC--CCceEEEEcccCCCC----------------------------------cceEEEEEEcCCCCCccceeEecCCC
Q 014220 125 ILP--GEKPAIFYTGIDPHN----------------------------------RQVQNLAVPKNLSDPYLREWVKSPKN 168 (428)
Q Consensus 125 ~~~--dg~~~l~YTg~~~~~----------------------------------~~~q~lA~S~D~~d~~l~~w~k~~~n 168 (428)
.++ ||+.+|++.++.... ...++||++.+. +|..|+-. .
T Consensus 253 ~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~---Dl~~We~~--~ 327 (493)
T 1w18_A 253 EDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIATDS---TLSKWKFL--S 327 (493)
T ss_dssp ECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESST---TSCCEEEE--E
T ss_pred ecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEeCCC---CCccceec--C
Confidence 765 388999998864321 235667877643 36789864 4
Q ss_pred ceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-----C--C-ccEEEEEEeCCCC
Q 014220 169 PLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----N--R-KGLAILYRSKDFV 221 (428)
Q Consensus 169 Pvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-----~--~-~G~i~ly~S~Dl~ 221 (428)
|++..+ . ....+.=|.|+.. +|+|||+..++. . + .| +..|.|+.+.
T Consensus 328 PL~~a~--~--v~deiErP~V~~~--~GkyYLFtSs~~~t~a~~~~G~~g-~yg~VSdsl~ 381 (493)
T 1w18_A 328 PLISAN--C--VNDQTERPQVYLH--NGKYYIFTISHRTTFAAGVDGPDG-VYGFVGDGIR 381 (493)
T ss_dssp EEEECT--T--TBSCCEEEEEEEE--TTEEEEEEEECGGGBCTTCCCCSE-EEEEEESSSE
T ss_pred ccccCC--C--CCCcEECCeEEEE--CCEEEEEEEccCccccCCccCCcc-eEEEEeCCCC
Confidence 787655 2 2345677987644 899999988763 1 1 23 3457787765
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0016 Score=68.24 Aligned_cols=155 Identities=12% Similarity=0.042 Sum_probs=93.1
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCC-CCCCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPK-GAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~-~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
.+-+.-|. +++++|+|+|||..... ...+.....+.|+|+|.. .|++ +..+ .. ....++++.++||+.+
T Consensus 70 ~~~~WAP~-i~~~~g~~ylyyt~~~~~~g~~~~~~~~va~s~~~~Gpw~~-p~~~-~~------~~iDp~vf~DddG~~Y 140 (535)
T 2exh_A 70 SGGVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYL-NS------SGFDPSLFHDEDGRKY 140 (535)
T ss_dssp TCBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEEC-CC------SCSCCEEEECTTSCEE
T ss_pred CCCEECCe-EEEECCEEEEEEEeccCCCCCccccceEEEEeCCCCCCccc-cEec-CC------CcCCCceEECCCCCEE
Confidence 45578885 78899999999986432 122334678899999986 6986 2222 11 2356888887789999
Q ss_pred EEEcccCC-CC---cceEEEEE-EcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC
Q 014220 133 IFYTGIDP-HN---RQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (428)
Q Consensus 133 l~YTg~~~-~~---~~~q~lA~-S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~ 207 (428)
|+|..... .. ...+.++. +.|. +..... ...++.+. ......-|+++ + .+|+|||++++...
T Consensus 141 l~~~~~~~~~~~~~~~~i~~~~l~~d~----~~~~g~--~~~i~~~~-----~~~~~EgP~i~-k-~~G~YYL~~s~ggt 207 (535)
T 2exh_A 141 LVNMYWDHRVDHHPFYGIVLQEYSVEQ----KKLVGE--PKIIFKGT-----DLRITEGPHLY-K-INGYYYLLTAEGGT 207 (535)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETTT----TEEEEE--EEEEECCC-----TTCCCEEEEEE-E-ETTEEEEEEEESCS
T ss_pred EEEEecCCccCCCCCCcEEEEEECCcc----CCCCCC--cEEEEcCC-----CCCccccceEE-E-ECCEEEEEEeCCCC
Confidence 99875431 11 12334443 3332 111111 12233222 12346789854 4 48999999976532
Q ss_pred C-ccEEEEEEeCCCC-CcEEcc-cccc
Q 014220 208 R-KGLAILYRSKDFV-HWIKAK-HPLH 231 (428)
Q Consensus 208 ~-~G~i~ly~S~Dl~-~W~~~~-~~l~ 231 (428)
+ .-.+.+++|+++. -|+... +|+.
T Consensus 208 ~~~~~~~~~rs~s~~GP~~~~~~~pil 234 (535)
T 2exh_A 208 RYNHAATIARSTSLYGPYEVHPDNPLL 234 (535)
T ss_dssp STTCEEEEEEESSTTCCCEECTTCCSE
T ss_pred CCCeEEEEEEeCCCCCCCccCCCcceE
Confidence 2 2267899999876 687653 3444
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0064 Score=59.21 Aligned_cols=157 Identities=12% Similarity=0.155 Sum_probs=80.5
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCC---CcEEEEEEeCCC----CCCccCCCCCCCCCCccCCCeEeeeEEEcCCCc
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWG---NIVWAHSTSKDL----INWIPHDPAIYPSQQSDINGCWSGSATILPGEK 130 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g---~~~Wgha~S~Dl----v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~ 130 (428)
+.-|. +++++|+|+|||...+.+.... ......++++.. -.|++.+....+. ......++++.+ ||+
T Consensus 74 ~WAP~-v~~~~G~yylyys~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~~~~~~~~----~~~~IDp~vf~D-dd~ 147 (330)
T 3k1u_A 74 IWAPE-IHFINGAWYIYFAAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEKGRIKTAW----ESFSLDATIFEH-NEK 147 (330)
T ss_dssp EEEEE-EEEETTEEEEEEEEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEEEECCCSS----CSCEEEEEEEEE-TTE
T ss_pred eECCE-EEEECCeEEEEEEeccCCCCCCcccceeeeEEEeCCCCCccccccccccccCCC----CCCccCceEEEE-CCc
Confidence 44564 7889999999998776543221 222333333332 2455543322211 134567888876 555
Q ss_pred eEEEEcccCC--CCcceEEEEEEcCCCCCccceeEecCCCcee-cCCCCCCCC---CCCccCCeEEEECCCCeEEEEEee
Q 014220 131 PAIFYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-APDAMNQIN---TSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 131 ~~l~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi-~~~~~~~~~---~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
.+++|.+... ...+.+.++..++. ++. .+.|+. ..+. ..++ .....-|+++ + .+|.|||++++
T Consensus 148 ~~~~~~~~~~~~~~~~~i~i~~l~~~-------~~~-~g~~~~i~~~~-~~~e~~~~~~~EGp~i~-k-~~G~YYL~ys~ 216 (330)
T 3k1u_A 148 LYYVWAQQDINIKGHSNIYIAEMENP-------WTL-KTKPVMLTKPE-LEWEIKGFWVNEGPAVL-K-KNGKIFITYSA 216 (330)
T ss_dssp EEEEEEECCTTSSSSBEEEEEEEEET-------TEE-CSCCEEEECSC-SGGGCSSSCBEEEEEEE-E-ETTEEEEEEEE
T ss_pred cEEEEeecCCCcCCCceEEEEECCCC-------ccc-cCCcEEecCCC-ccccccCCceeeCCEEE-E-ECCEEEEEEEe
Confidence 5555554332 12334445543321 121 123332 2220 1111 1224688864 4 48999999976
Q ss_pred ec-CCccEEEEEEeCCCC------CcEEcccccc
Q 014220 205 KI-NRKGLAILYRSKDFV------HWIKAKHPLH 231 (428)
Q Consensus 205 ~~-~~~G~i~ly~S~Dl~------~W~~~~~~l~ 231 (428)
.. ...-++.+++|+... .|+..+.++.
T Consensus 217 ~~~~~~y~~~~~~s~~~~gP~~~~~~~~~~~pi~ 250 (330)
T 3k1u_A 217 SATDVNYCIGMLTAEENSNLLDKNSWTKSQTPVF 250 (330)
T ss_dssp SCSSTTCEEEEEEEETTSCTTSGGGCEECSSCSB
T ss_pred CCCCCCceEEEEEECCCCCCCCCccccccCCCEE
Confidence 54 222367788886543 3776555443
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0013 Score=69.14 Aligned_cols=114 Identities=17% Similarity=0.262 Sum_probs=74.2
Q ss_pred eeEEEcCCCceEEEEcccCCC---Cc-ceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCC
Q 014220 121 GSATILPGEKPAIFYTGIDPH---NR-QVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK 196 (428)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~---~~-~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g 196 (428)
+..++..+|+++|||.-+... +. ..-++|+|+| |.||+.. .|+|.|. ..++....-.+.++.. .+|
T Consensus 23 PnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~D-----lv~W~~~--~~aL~P~--~~~D~~Gv~SGsav~~-~dg 92 (543)
T 1st8_A 23 PNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYD-----LVNWIHL--DPAIYPT--QEADSKSCWSGSATIL-PGN 92 (543)
T ss_dssp EEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESS-----SSSEEEC--CCSBCCC--SGGGTTEEEEEEEEEE-TTT
T ss_pred CcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCC-----ccceEEC--CeeccCC--CccccCCEEcceEEEe-eCC
Confidence 444444599999999876432 23 5678999988 4899985 4677654 3333334456665443 588
Q ss_pred eEEEEEeee-cCCccEEEEEEeCCC-----CCcEEcc-cccccCCCC---CeeecCce
Q 014220 197 RWRVIIGSK-INRKGLAILYRSKDF-----VHWIKAK-HPLHSVKGT---GMWECPDF 244 (428)
Q Consensus 197 ~y~Mv~ga~-~~~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~~~---~~wECPdl 244 (428)
+++|++.+. .+..-...++.|+|. .+|+... +|+.....+ ..+.-|.+
T Consensus 93 ~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~v 150 (543)
T 1st8_A 93 IPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPST 150 (543)
T ss_dssp EEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCC
T ss_pred EEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeE
Confidence 999999873 333446678889875 8899853 455543222 45778874
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00054 Score=69.97 Aligned_cols=160 Identities=13% Similarity=0.156 Sum_probs=97.0
Q ss_pred cCCcceEE--ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 014220 59 NDPNGVMI--YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (428)
Q Consensus 59 nDPng~~~--~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~Y 135 (428)
..|. ++| ++|+|||||..+..+ .+....+.|+|++.. .|++.++.+..+.+ .....+++++++||+.+|+|
T Consensus 86 WAP~-V~y~~~dGkYYLyyt~~~~~--~~~~~igVAtSdsP~GPwt~~gpl~~~g~~---~~~IDPsvF~DdDGk~YL~~ 159 (441)
T 3nqh_A 86 ERVK-VMKCPSTGEYVMYMHADDMN--YKDPHIGYATCSTIAGEYKLHGPLLYEGKP---IRRWDMGTYQDTDGTGYLLL 159 (441)
T ss_dssp EEEE-EEECTTTCCEEEEEEEEETT--SCSCEEEEEEESSTTSCCEEEEECEETTEE---CCCCSEEEEECTTSCEEEEE
T ss_pred CCce-eEEEccCCEEEEEEEeCCCC--CCcceEEEEEeCCCCCCceEcceeecCCCc---ccccCceEEEeCCCCEEEEe
Confidence 3453 566 599999999876432 235689999999965 79987654433321 13457889988889999999
Q ss_pred cccCCCCcceEEEE-EEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC-CccEEE
Q 014220 136 TGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKGLAI 213 (428)
Q Consensus 136 Tg~~~~~~~~q~lA-~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~-~~G~i~ 213 (428)
.+. .++ .+.| +.++... ++.-.+ + ....-|++ ++ .+|.|||+++.... ....+.
T Consensus 160 g~~--------~I~eLs~D-----~~~~~g~---~~~i~~---g---~~~EgP~i-~K-~~G~YYL~~S~~~g~~~~~~~ 215 (441)
T 3nqh_A 160 HGG--------IVYRLSKD-----YRTAEEK---VVSGVG---G---SHGESPAM-FK-KDGTYFFLFSNLTSWEKNDNF 215 (441)
T ss_dssp GGG--------EEEEECTT-----SSSEEEE---EESCST---T---CCCEEEEE-EE-ETTEEEEEEECSCTTSCCCCE
T ss_pred CCC--------cEEEeCCc-----cccccCc---eEEeCC---C---CceECcEE-EE-ECCEEEEEEeCCCCcCCCceE
Confidence 652 133 3333 3455431 221111 1 23578985 45 58999999986431 112457
Q ss_pred EEEeCCCC-CcEEcccccccCCCCCeeecCceEEec
Q 014220 214 LYRSKDFV-HWIKAKHPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 214 ly~S~Dl~-~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (428)
+++|+++. -|+..+.++........--+..+|++.
T Consensus 216 ~arS~s~~GPw~~~g~i~~~~~~t~~sQ~t~vl~v~ 251 (441)
T 3nqh_A 216 YFTAPSVKGPWTRQGLFAPEGSLTYNSQTTFVFPLK 251 (441)
T ss_dssp EEEESSTTCCCEEEEESSCTTSHHHHCEEEEEEEEE
T ss_pred EEEeCCCCCCceECCccCCCCCccCcCCCceEEEeC
Confidence 88999977 699877654322111122344555554
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0021 Score=67.23 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=77.1
Q ss_pred eeEEEcCCCceEEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCC-
Q 014220 121 GSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK- 196 (428)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g- 196 (428)
++.++..+|+++|||.-+... +...-++|+|+| |.||+..+ ++|.++..|..+....-++.++.. .+|
T Consensus 23 PnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~D-----lv~W~~~~--~al~~~g~P~~d~~g~~SGsav~~-~~~~ 94 (518)
T 1y4w_A 23 PNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISED-----LTHWEEKP--VALLARGFGSDVTEMYFSGSAVAD-VNNT 94 (518)
T ss_dssp EEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESS-----SSSCEEEE--EEECCBTTTSCCCBEEEEEEEEEC-TTCT
T ss_pred CCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCC-----CccEEECC--ceEecCCCCCCCCCceEeeeEEEc-CCCc
Confidence 443444699999999865321 345678999998 58999863 566211012123345567776543 443
Q ss_pred ---------eEEEEEeeecC-C------------ccEEEEEEeCC-CCCcEEc--ccccccCCC------CCeeecCceE
Q 014220 197 ---------RWRVIIGSKIN-R------------KGLAILYRSKD-FVHWIKA--KHPLHSVKG------TGMWECPDFF 245 (428)
Q Consensus 197 ---------~y~Mv~ga~~~-~------------~G~i~ly~S~D-l~~W~~~--~~~l~~~~~------~~~wECPdlf 245 (428)
+++|++.+... . .-.+.++.|+| +.+|+.. ++|+..... ...+.-|.+|
T Consensus 95 ~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g~~w~k~~~~~pvi~~~~~~y~~~~~~fRDP~V~ 174 (518)
T 1y4w_A 95 SGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVF 174 (518)
T ss_dssp TSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTTSSCEECTTTCCSBCSCCTTCGGGTTSEEEEEEE
T ss_pred cccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCCceEEEcCCCCCeEecCCcccccCCCCcCCCcEe
Confidence 89999876531 1 13567888988 8899986 346554321 2568889999
Q ss_pred EeccCC
Q 014220 246 PVSTYG 251 (428)
Q Consensus 246 ~l~~~g 251 (428)
+.+..|
T Consensus 175 ~~~~~g 180 (518)
T 1y4w_A 175 WHDESQ 180 (518)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 875333
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0023 Score=67.24 Aligned_cols=114 Identities=12% Similarity=0.208 Sum_probs=74.1
Q ss_pred eeEEEcCCCceEEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCe
Q 014220 121 GSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (428)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~ 197 (428)
+..++..+|+++|||.-+... +...-++|+|+| |.||+.. .|+|.|. ..++....-.+.++. ..+|+
T Consensus 24 PnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--~~aL~P~--~~~D~~G~~SGsav~-~~dg~ 93 (541)
T 2ac1_A 24 PNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTD-----LINWDPH--PPAIFPS--APFDINGCWSGSATI-LPNGK 93 (541)
T ss_dssp EEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESS-----SSSBEEE--EEEECCC--SGGGTTCEEEEEEEE-CTTSC
T ss_pred CCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCC-----ccceEEC--ceeecCC--CccccCCEEcceEEE-eeCCE
Confidence 444444589999999876432 345568999988 4899986 4677655 333334455666543 35889
Q ss_pred EEEEEeeec-CCccEEEEEEeCCC-----CCcEEcc-cccccCC--C---CCeeecCce
Q 014220 198 WRVIIGSKI-NRKGLAILYRSKDF-----VHWIKAK-HPLHSVK--G---TGMWECPDF 244 (428)
Q Consensus 198 y~Mv~ga~~-~~~G~i~ly~S~Dl-----~~W~~~~-~~l~~~~--~---~~~wECPdl 244 (428)
++|++.+.. +....+.++.|+|. .+|+... +|+.... . ...+.-|.+
T Consensus 94 ~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~v 152 (541)
T 2ac1_A 94 PVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTT 152 (541)
T ss_dssp EEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCC
T ss_pred EEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeE
Confidence 999997743 33446678889874 8999853 4555432 2 235677873
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0027 Score=65.84 Aligned_cols=114 Identities=9% Similarity=0.033 Sum_probs=73.5
Q ss_pred eeEEEcCCCceEEEEcccCCC--CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCC--
Q 014220 121 GSATILPGEKPAIFYTGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK-- 196 (428)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g-- 196 (428)
+..++..+|+|+|||.-+... ... -++|+|+| |.||+..+ ++|.|. . ....-...++.. .++
T Consensus 16 PNG~~y~~G~YHlFYQ~~P~~~~~g~-WgHa~S~D-----LvhW~~~~--~aL~P~--~---~~g~~SGSav~~-~~~~~ 81 (492)
T 4ffh_A 16 PQRPVTTHGAYQLYYLHSDQNNGPGG-WDHASTTD-----GVAFTHHG--TVMPLR--P---DFPVWSGSAVVD-TANTA 81 (492)
T ss_dssp EEEEEEETTEEEEEEEEESSTTCCCE-EEEEEESS-----SSSCEEEE--EEECCB--T---TBCCCCEEEEEE-TTCSS
T ss_pred CeeeEEECCEEEEEEECCCCCCCCCc-EEEEEeCC-----CCccEECC--CCCCCC--C---CCCEEeceEEEe-CCCcc
Confidence 333444589999999865321 112 78999998 58999863 566543 1 234456665544 444
Q ss_pred -----eEEEEEeeecC---CccEEEEEEeCC-CCCcEEcccccccCCCCCe------------eecCceEEec
Q 014220 197 -----RWRVIIGSKIN---RKGLAILYRSKD-FVHWIKAKHPLHSVKGTGM------------WECPDFFPVS 248 (428)
Q Consensus 197 -----~y~Mv~ga~~~---~~G~i~ly~S~D-l~~W~~~~~~l~~~~~~~~------------wECPdlf~l~ 248 (428)
.++|++.+... ..-...++.|+| +.+|+..++|+........ +.-|.+|+.+
T Consensus 82 g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g~~w~k~~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V~~~~ 154 (492)
T 4ffh_A 82 GFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDT 154 (492)
T ss_dssp SSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSSSSCEECSSCSBCCTTTTTCCSHHHHHHHTCEEEEEEEEET
T ss_pred ccCCCcEEEEEeecccCCCCcEEEEEEEeCCCCceEEEcCccccCCCCccccccccccccCCCCcCCEEEEEC
Confidence 48888876542 233567889988 7899987556654322222 7889999864
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0024 Score=66.82 Aligned_cols=116 Identities=8% Similarity=0.069 Sum_probs=73.4
Q ss_pred eeEEEcCCCceEEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCe
Q 014220 121 GSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (428)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~ 197 (428)
+..++..+|+|+|||.-+... +...-++|+|+| |.||+..+ ++|.|. ..++....-.+.++. +.+|+
T Consensus 55 PNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~D-----LvhW~~~~--~aL~P~--~~~d~~g~~SGSav~-~~dg~ 124 (526)
T 3pij_A 55 PNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTD-----MLNWKREP--IMFAPS--LEQEKDGVFSGSAVI-DDNGD 124 (526)
T ss_dssp EEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESS-----SSSEEECC--CCBCCC--BGGGTTEEEEEEEEE-CTTSC
T ss_pred CeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCC-----CCCceeCe--eccCCC--CccccCCeEeceEEE-ccCCE
Confidence 443444589999999865322 345678999998 58999853 566554 223334445666553 35778
Q ss_pred EEEEEeeec-----CCc----cEEEEEEeCCC--CCcEEccccccc-CC--CCCeeecCceEEe
Q 014220 198 WRVIIGSKI-----NRK----GLAILYRSKDF--VHWIKAKHPLHS-VK--GTGMWECPDFFPV 247 (428)
Q Consensus 198 y~Mv~ga~~-----~~~----G~i~ly~S~Dl--~~W~~~~~~l~~-~~--~~~~wECPdlf~l 247 (428)
++|++.+.. +.. -...++.|+|+ .+|+..+ ++.. +. ....+.=|.+|+-
T Consensus 125 ~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~gl~~w~K~~-pvi~~P~~~~~~~fRDP~V~~~ 187 (526)
T 3pij_A 125 LRFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSATKQG-MIIDCPTDKVDHHYRDPKVWKT 187 (526)
T ss_dssp EEEEEEEEEETTSSSGGGCEEEEEEEEEESSTTCSCEEEEE-EEECCCGGGEEEEEEEEEEEEE
T ss_pred EEEEEecccCcccccCCCCceeEEEEEEECCCCcceEEECC-ccccCCCCccccccccCEEEEE
Confidence 988887653 111 24678889887 8999765 3332 21 1235777888874
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0044 Score=63.36 Aligned_cols=143 Identities=10% Similarity=0.118 Sum_probs=88.9
Q ss_pred ECCEEEEEEeeCCCCCCCCCcEEEEEE-----eCC---CCCCccCCCCCCCCCC-c---------------cCCCeEeee
Q 014220 67 YKGIYHLFYQYNPKGAVWGNIVWAHST-----SKD---LINWIPHDPAIYPSQQ-S---------------DINGCWSGS 122 (428)
Q Consensus 67 ~~G~YHlFYq~~p~~~~~g~~~Wgha~-----S~D---lv~W~~~~~al~P~~~-~---------------D~~gv~SGs 122 (428)
.+|++||||...-... .....+.+|+ |+| +..|+...+.+.+++. | +....-.+-
T Consensus 145 ~dG~i~LfYTg~~~~~-~~~q~I~~a~~~l~~~~dgv~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~fRDP~ 223 (447)
T 1oyg_A 145 SDGKIRLFYTDFSGKH-YGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 223 (447)
T ss_dssp TTSCEEEEEEEEEGGG-TTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred cCCEEEEEEEeecCCC-CCceEEEEEecceeecCCCcceecccCCCceEcCCCccccccccccccccccCCCccccCCCe
Confidence 5999999999754321 1234567776 578 4567766666777542 1 123455677
Q ss_pred EEEcCCCceEEEEcccCCCC-----------------------------------------cceEEEEE-EcCCCCCccc
Q 014220 123 ATILPGEKPAIFYTGIDPHN-----------------------------------------RQVQNLAV-PKNLSDPYLR 160 (428)
Q Consensus 123 av~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~lA~-S~D~~d~~l~ 160 (428)
++.+ +|+++|++.+..... .-.++|+. |.| +.
T Consensus 224 Vf~d-~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D-----l~ 297 (447)
T 1oyg_A 224 YVED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD-----YT 297 (447)
T ss_dssp EEEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT-----SS
T ss_pred EEeE-CCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC-----CC
Confidence 7764 899999998765321 12455553 443 57
Q ss_pred eeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCC--------ccE-EEEEEeCCCCC-cE
Q 014220 161 EWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR--------KGL-AILYRSKDFVH-WI 224 (428)
Q Consensus 161 ~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~--------~G~-i~ly~S~Dl~~-W~ 224 (428)
.|+-. .|++.+. .. ...+.=|.++ + .+|+|||++..+... .++ +..|+|+.+.. |+
T Consensus 298 ~W~~~--~pL~~~~---~v-~d~~EcPdlf-k-~dGkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GPy~ 363 (447)
T 1oyg_A 298 LKKVM--KPLIASN---TV-TDEIERANVF-K-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363 (447)
T ss_dssp EEEEE--EEEEECT---TT-CSCCEEEEEE-E-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred CceEc--cccccCC---CC-CCceEcCcEE-E-ECCEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCCCe
Confidence 89864 4777543 11 2347789864 4 489999999876411 123 44688998863 54
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.01 Score=62.23 Aligned_cols=82 Identities=11% Similarity=0.064 Sum_probs=54.3
Q ss_pred CCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccCC------------
Q 014220 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK------------ 234 (428)
Q Consensus 167 ~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~------------ 234 (428)
.||||.. .+.||.|+.. ++.|||+-.+.. ....+-+|+|+||++|+..+..+....
T Consensus 9 ~NPil~g---------~~~DP~iir~--~~~YY~~~st~~-~~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~ 76 (542)
T 3zxk_A 9 TNPVLWE---------DHPALEVFRV--GSVFYYSSSTFA-YSPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTP 76 (542)
T ss_dssp ESCSCCS---------CCCSCEEEEE--TTEEEEECCCBT-EESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTT
T ss_pred cCCccCC---------CCCCCeEEEE--CCEEEEEEecCc-cCCCeEEEEcCCCCCccccccccccCCccccccccCCcc
Confidence 4788832 2579997643 678999865432 223478999999999999876543210
Q ss_pred --CCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 235 --GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 235 --~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
.....--|++...+.+| +++|.++..
T Consensus 77 ~~~~~~~WAP~i~~~~~~G-------------~fYly~~~~ 104 (542)
T 3zxk_A 77 GAYVKGIWASTLRYRRSND-------------RFYWYGCVE 104 (542)
T ss_dssp TTTTCSBCSCEEEEETTTT-------------EEEEEEEET
T ss_pred cccCCceECCcEEEECCCC-------------EEEEEEECC
Confidence 12345678887775223 788877764
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.022 Score=59.67 Aligned_cols=134 Identities=7% Similarity=0.036 Sum_probs=82.4
Q ss_pred eEE-ECCEEEEEEeeCCCCCC-CCCcEEEEEE-------eCC---CCCCccCCCCCCCCCC-c-------------cCCC
Q 014220 64 VMI-YKGIYHLFYQYNPKGAV-WGNIVWAHST-------SKD---LINWIPHDPAIYPSQQ-S-------------DING 117 (428)
Q Consensus 64 ~~~-~~G~YHlFYq~~p~~~~-~g~~~Wgha~-------S~D---lv~W~~~~~al~P~~~-~-------------D~~g 117 (428)
.+. .+|+++|||..+-.... ......+.+. |+| +..|+...+.+.+++. | +...
T Consensus 200 Ai~~~DG~l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~~ 279 (571)
T 2yfr_A 200 ATLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIA 279 (571)
T ss_dssp EEECTTSCEEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCCC
T ss_pred eEECcCCEEEEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCCCceecCCCcccccccccccccccCCccc
Confidence 344 59999999997643321 1223444432 467 4567766666666542 1 3344
Q ss_pred eEeeeEEEcCCCceEEEEcccCCCC-----------------------------------------cceEEEEEEcCCCC
Q 014220 118 CWSGSATILPGEKPAIFYTGIDPHN-----------------------------------------RQVQNLAVPKNLSD 156 (428)
Q Consensus 118 v~SGsav~~~dg~~~l~YTg~~~~~-----------------------------------------~~~q~lA~S~D~~d 156 (428)
.-.+.++.+++|+++|++.+..... ...++++.|.|..
T Consensus 280 FRDP~Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~- 358 (571)
T 2yfr_A 280 MRDAHVIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDV- 358 (571)
T ss_dssp CEEEEEEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCT-
T ss_pred CcCCeEEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCc-
Confidence 5568877654599999998764321 2456788886632
Q ss_pred CccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec
Q 014220 157 PYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (428)
Q Consensus 157 ~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~ 206 (428)
.++..|+-. .|++.+. . ....+.=|.++ . .+|+|||++.++.
T Consensus 359 ~n~~~We~~--~pL~~~~--~--v~dm~EcP~lf-~-~dG~yyL~~S~q~ 400 (571)
T 2yfr_A 359 KNPSVAKVY--SPLISAP--M--VSDEIERPDVV-K-LGNKYYLFAATRL 400 (571)
T ss_dssp TSCCEEEEC--CCSEECT--T--TBSCCEEEEEE-E-ETTEEEEEEEEEG
T ss_pred CCcccceec--cccccCC--C--cCceeecCcEE-E-ECCEEEEEEeCCC
Confidence 124689853 5777543 1 12456778854 4 4899999998764
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.23 Score=49.13 Aligned_cols=188 Identities=11% Similarity=0.046 Sum_probs=100.4
Q ss_pred ccccCCCCCccCCcce----EE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC-CCCccCCCCCCCCCCccCCCeEeee
Q 014220 49 YHFQPPKNWINDPNGV----MI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL-INWIPHDPAIYPSQQSDINGCWSGS 122 (428)
Q Consensus 49 ~H~~p~~gw~nDPng~----~~-~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SGs 122 (428)
-=|.|+.++ .|++.. +. .||+.-+++...... .+..+++..+|+|. .+|++......+...+ .-++.++
T Consensus 10 ~if~~~~~~-~~~~~~yp~~v~L~dG~lLa~~~~~~~~--~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~~P~ 84 (355)
T 3a72_A 10 TIFSPPSDY-IVPRTLYPRNEQLPNGDLLATWENYSPE--PPAVYFPIYRSKDHGKTWNEISRVHDTVNGY--GLRYQPF 84 (355)
T ss_dssp EEECCCTTS-CTTSEEEEEEEECTTSCEEEEEEECCCS--SSCCCEEEEEESSTTSCCEEEEEECCTTTSS--CEEEEEE
T ss_pred eEecCCccc-CCCCCccceEEEcCCCCEEEEEEeecCC--CCCceEEEEEEcCCCcCcCCCcccCCCcCCc--ccccCCc
Confidence 346677764 566422 22 489888877655432 13456778889996 7999864433222211 1133566
Q ss_pred EEEcC-------CCceEEEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCC-CCCCCCCCccCCeEEEEC
Q 014220 123 ATILP-------GEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDA-MNQINTSSFRDPTTAWLG 193 (428)
Q Consensus 123 av~~~-------dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~-~~~~~~~~~RDP~V~~~~ 193 (428)
++..+ +|++.+.......+ ....+.+..|+|+| ++|++.. .+..... .+.......-.|++. .
T Consensus 85 l~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G----~TW~~~~--~i~~~~~~~~~~g~~~v~eP~~~-~- 156 (355)
T 3a72_A 85 LYSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDG----MTWDFVS--HIAAGGEARPNNGLTPVWEPFLL-A- 156 (355)
T ss_dssp EEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTT----SCCEEEE--EEEEESCSSCCTTCCCEEEEEEE-E-
T ss_pred EEecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCC----ccCccCc--cccccCccccccCCCccccceEE-c-
Confidence 65555 77776665443221 23456788999986 8999853 2221110 000001112246533 2
Q ss_pred CCCeEEEEEeeec-C-C-ccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEecc
Q 014220 194 PDKRWRVIIGSKI-N-R-KGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVST 249 (428)
Q Consensus 194 ~~g~y~Mv~ga~~-~-~-~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~ 249 (428)
.+|+.++++..+. + . ...+.+..|+|+++|...............--.|.+.++.+
T Consensus 157 ~~G~l~~~~~~~~~~~~~~~~~~~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~d 215 (355)
T 3a72_A 157 NKGKLICYYSDQRDNATYGQTMVHQVTNDLKNWGPVVEDVTYPTYTDRPGMPVVTKLPN 215 (355)
T ss_dssp ETTEEEEEEEECCCTTTCSCEEEEEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECTT
T ss_pred cCCeEEEEECCCCCCCCCCcEEEEEECCCCCCCCCCeeccccCccCCCCCceEEEECCC
Confidence 4688877776443 1 1 23566678999999964321111111111223478888873
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.024 Score=59.01 Aligned_cols=109 Identities=14% Similarity=0.158 Sum_probs=68.7
Q ss_pred CCceEEEEcccCCC---C-cceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEEC----------
Q 014220 128 GEKPAIFYTGIDPH---N-RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG---------- 193 (428)
Q Consensus 128 dg~~~l~YTg~~~~---~-~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~---------- 193 (428)
+|+|+|||.-+... + ...-++|+|+| |.||+..+ ++|.|. . +....-...++-.+
T Consensus 34 ~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~D-----LvhW~~~~--~aL~P~--~--d~~G~~SGSav~d~~~t~g~~~~~ 102 (509)
T 3kf3_A 34 AKLWHLYFQYNPNATAWGQPLYWGHATSND-----LVHWDEHE--IAIGPE--H--DNEGIFSGSIVVDHNNTSGFFNSS 102 (509)
T ss_dssp TTEEEEEEEEETTCSSCCSSBEEEEEEESS-----SSSCEECS--CCBCCS--S--TTCEEEEEEEEECTTCTTSCCCTT
T ss_pred CCEEEEEEecCCCCCCCCCcCEEEEEEccC-----CCCcEECc--cccccc--c--cCCCEEeceEEEeCCccccccccc
Confidence 69999999754322 2 24568999998 58999863 566543 1 22233344443221
Q ss_pred --CCCeEEEEEeeecCCccEEEEEEeCC-CCCcEEcc-cccccCCCCCeeecCceEEec
Q 014220 194 --PDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKAK-HPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 194 --~~g~y~Mv~ga~~~~~G~i~ly~S~D-l~~W~~~~-~~l~~~~~~~~wECPdlf~l~ 248 (428)
.+++++|++.+.....-...++.|+| +.+|+... +|+... ....+.-|.+|..+
T Consensus 103 ~~p~~~l~~~YTg~~~~~q~q~lA~S~D~g~~~~k~~~nPVi~~-~~~~fRDPkVfw~~ 160 (509)
T 3kf3_A 103 IDPNQRIVAIYTNNIPDNQTQDIAFSLDGGYTFTKYENNPVIDV-SSNQFRDPKVFWHE 160 (509)
T ss_dssp SCGGGCEEEEEEEEETTEEEEEEEEESSSSSSCEECTTCCSBCC-SCSSCEEEEEEEET
T ss_pred cCCCCceEEEECCCCCCCeeEEEEEECCCCcceEEcCCCceEcC-CCCcccCCeEEEEC
Confidence 13578888876544344567888988 78998753 455432 23457888888765
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.34 Score=48.11 Aligned_cols=188 Identities=11% Similarity=0.083 Sum_probs=101.2
Q ss_pred cccccCCCCCccCCcc----eEE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC-CCCccCCCCCCCCCCccCCCeEee
Q 014220 48 GYHFQPPKNWINDPNG----VMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL-INWIPHDPAIYPSQQSDINGCWSG 121 (428)
Q Consensus 48 ~~H~~p~~gw~nDPng----~~~-~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dl-v~W~~~~~al~P~~~~D~~gv~SG 121 (428)
.-=|.|+.+ .+|++. ++. .||+.-++|...... .+..++...+|+|. .+|++......+...+ .-++.+
T Consensus 14 ~~if~~~~~-~~~~~~~yp~~v~L~dG~LLa~~~~~~~~--~~~~~~~v~rS~DgG~TW~~~~~v~~~~~g~--~~~~~P 88 (367)
T 2ydt_A 14 VEIFDPPTN-YRDPQVLYARPLELSDGTLLGTWENYSPE--PPNVWFPIVKSKDGGKTWKEISKVKDTQNNW--GLRYQP 88 (367)
T ss_dssp EEEECCCTT-SCTTSEEEEEEEECTTSCEEEEEEECCCS--SSCCCEEEEEESSTTSSCEEEEEECCCSSSS--CEEEEE
T ss_pred eeEecCCcc-cCCCCCCceeEEEcCCCCEEEEEEeccCC--CCCeEEEEEEECCCCcCcCcCcccCCCCCCc--ccccCC
Confidence 344677776 447652 222 489888877654322 14456788899996 8999864433222222 123466
Q ss_pred eEEEcC-------CCceEEEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCC--CCCCccCCeEEE
Q 014220 122 SATILP-------GEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQI--NTSSFRDPTTAW 191 (428)
Q Consensus 122 sav~~~-------dg~~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~--~~~~~RDP~V~~ 191 (428)
+++..+ +|++.+.+.....+ ....+.+..|+|++ ++|++.. .|..... +.. .....-+|+++
T Consensus 89 ~l~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G----~TW~~~~--~i~~g~~-~~~~~g~~~v~eP~~~- 160 (367)
T 2ydt_A 89 QLYELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKG----YTWEFVS--HVALGGE-ALPNPGLTPVWEPFLM- 160 (367)
T ss_dssp EEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSS----SCCEEEE--EEEEESC-SSCCTTCCCEEEEEEE-
T ss_pred eEEEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCC----CCCcCCe--ecccCCC-cccccCCCccccceEE-
Confidence 665544 67776665443221 23456678899986 8999752 2322110 000 01112256533
Q ss_pred ECCCCeEEEEEeeecC--Ccc-EEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEecc
Q 014220 192 LGPDKRWRVIIGSKIN--RKG-LAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVST 249 (428)
Q Consensus 192 ~~~~g~y~Mv~ga~~~--~~G-~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~ 249 (428)
. .+|+.++++....+ ..+ .+.+..|+|+++|+..............--.|.+.++.+
T Consensus 161 ~-~~G~l~v~~~d~~~~~~~~q~l~~~~S~DG~TWs~~~~~~~~~~~~~rpg~p~v~~l~d 220 (367)
T 2ydt_A 161 T-YKEKLILYYSDQRDNATHSQKLVHQTTTDLKKWSKVVDDTKYANYYARPGMPTVAKLPN 220 (367)
T ss_dssp E-ETTEEEEEEEECCSTTTCSSEEEEEEESSSSSCCCCEEEECCSSTTCEEEEEEEEECTT
T ss_pred C-CCCcEEEEECCCCCCCCCCcEEEEEECCCCCCCCCceeccccCCcCCCCCcceEEECCC
Confidence 2 46777766654332 233 466778999999964321111111122233477778863
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.072 Score=53.04 Aligned_cols=149 Identities=15% Similarity=0.219 Sum_probs=80.9
Q ss_pred CCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccC
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGID 139 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 139 (428)
+| -++..+|+..++|........ ....+.|++|+|..+|...-... +...+... .--..++...||+++|.|.-..
T Consensus 156 eP-~~~~~~G~l~v~~~d~~~~~~-~~q~l~~~~S~DG~TWs~~~~~~-~~~~~~~r-pg~p~v~~l~dG~l~~~y~~~~ 231 (367)
T 2ydt_A 156 EP-FLMTYKEKLILYYSDQRDNAT-HSQKLVHQTTTDLKKWSKVVDDT-KYANYYAR-PGMPTVAKLPNNEYIYVYEYGG 231 (367)
T ss_dssp EE-EEEEETTEEEEEEEECCSTTT-CSSEEEEEEESSSSSCCCCEEEE-CCSSTTCE-EEEEEEEECTTSCEEEEEEEET
T ss_pred cc-eEECCCCcEEEEECCCCCCCC-CCcEEEEEECCCCCCCCCceecc-ccCCcCCC-CCcceEEECCCCcEEEEEEecC
Confidence 44 334579999999976542122 23468899999999997642211 11111111 1123455667999999886432
Q ss_pred C-------CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEEC---CCCeEEEEEeeecCCc
Q 014220 140 P-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG---PDKRWRVIIGSKINRK 209 (428)
Q Consensus 140 ~-------~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~---~~g~y~Mv~ga~~~~~ 209 (428)
. .......+++|.|+ .+|....+.++.... + .....-|+|+|.. .+|+- ++.+.. +
T Consensus 232 ~~~~~~~~~~~~~~~~~~S~DG-----~tw~~~~~~~l~~~~---~--~~~~~sp~v~~~p~~~~~g~l--~~s~~~--~ 297 (367)
T 2ydt_A 232 GPNPPAGSDYWFPVYYRLSKDP-----QKFLNKAHHQIVSND---G--TTPAGSPYVVWTPYGGKNGTI--VVSCGT--R 297 (367)
T ss_dssp CSCCCTTCSCCCBEEEEEESST-----TCCTTSCCEECCCTT---C--CCCBSSCEEEEESTTSTTCEE--EEECSS--C
T ss_pred CCCcccccccccceEEEEcCCc-----cccCCcCCceeecCC---C--cccCcCceEEECcCCCCCCeE--EEEcCC--C
Confidence 1 11234567888775 688764322333221 1 1234678988874 23432 322211 1
Q ss_pred cEEEEEEeCCC-C--CcEEccc
Q 014220 210 GLAILYRSKDF-V--HWIKAKH 228 (428)
Q Consensus 210 G~i~ly~S~Dl-~--~W~~~~~ 228 (428)
. .+|.|+|+ . .|+....
T Consensus 298 ~--~v~~~~~~g~~~~W~~~~~ 317 (367)
T 2ydt_A 298 S--EIFTNQALGDASAWKKWDV 317 (367)
T ss_dssp S--CEEEESSTTCTTCCEEECC
T ss_pred c--eEEEECCCCCCCcceeccC
Confidence 1 36677554 3 7987643
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.11 Score=51.34 Aligned_cols=169 Identities=15% Similarity=0.173 Sum_probs=90.5
Q ss_pred CCCCCCCCccccccC--CCCC------ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCC
Q 014220 39 TSPNQPYRTGYHFQP--PKNW------INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPS 110 (428)
Q Consensus 39 ~~~~~~~Rp~~H~~p--~~gw------~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~ 110 (428)
+....+|.+.-++.. ...+ +..| -+...+|+..++|.....++.+ ...+.|++|+|..+|...-....+.
T Consensus 122 ~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP-~~~~~~G~l~~~~~~~~~~~~~-~~~~~~~~S~DG~TWs~~~~~~~~~ 199 (355)
T 3a72_A 122 QDDGMTWDFVSHIAAGGEARPNNGLTPVWEP-FLLANKGKLICYYSDQRDNATY-GQTMVHQVTNDLKNWGPVVEDVTYP 199 (355)
T ss_dssp SSTTSCCEEEEEEEEESCSSCCTTCCCEEEE-EEEEETTEEEEEEEECCCTTTC-SCEEEEEEESSSSSCCCCEEEECCS
T ss_pred CCCCccCccCccccccCccccccCCCccccc-eEEccCCeEEEEECCCCCCCCC-CcEEEEEECCCCCCCCCCeeccccC
Confidence 455667766544332 1111 1234 2344799999999754322222 3568999999999997643221121
Q ss_pred CCccCCCeEeeeEEEcCCCceEEEEcccCC----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccC
Q 014220 111 QQSDINGCWSGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRD 186 (428)
Q Consensus 111 ~~~D~~gv~SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RD 186 (428)
.+... .-...++...||+++|.|.-... ........++|.|+ .+|....+.++.... + ....--
T Consensus 200 -~~~~r-pg~p~v~~l~dG~l~l~y~~~~~~~~~~~~~~~~~~iS~DG-----~tw~~~~~~~~~~~~---~--~~~~g~ 267 (355)
T 3a72_A 200 -TYTDR-PGMPVVTKLPNGQYFYVYEYGSFFGTETYSFPLYYRLSSDP-----ENIASAPGQRLVVSS---G--TQPTSS 267 (355)
T ss_dssp -STTCE-EEEEEEEECTTSCEEEEEEEEBCTTSSSCBCBEEEEEESST-----TCCTTSCCEECCBTT---C--CCCBSS
T ss_pred -ccCCC-CCceEEEECCCCCEEEEEEECCCcccCCCceeEEEEECCCc-----ccccCcCCcceecCC---C--cccCCC
Confidence 11111 11245566789999998875432 12344667888874 678754322333222 1 123567
Q ss_pred CeEEEECC---CCeEEEEEeeecCCccEEEEEEeCC-C-CCcEEcc
Q 014220 187 PTTAWLGP---DKRWRVIIGSKINRKGLAILYRSKD-F-VHWIKAK 227 (428)
Q Consensus 187 P~V~~~~~---~g~y~Mv~ga~~~~~G~i~ly~S~D-l-~~W~~~~ 227 (428)
|.|.|... +|+ .|+.++. .. .+|.|.| . ..|+...
T Consensus 268 p~v~~~~~gg~~g~-ll~s~~~---~~--~v~~s~~~g~~~W~~~~ 307 (355)
T 3a72_A 268 PYAVWTPYGGENGT-IIVSSGT---QG--TLFINKALGEGEWTEIP 307 (355)
T ss_dssp CEEEEESTTSTTCE-EEEECSS---CS--SEEEESSTTCSCBEEEC
T ss_pred CeEEECcCCCCCCe-EEEEcCC---Cc--EEEEECCCCCCCCeECC
Confidence 88878632 232 2233321 12 2556644 4 6898654
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=95.69 E-value=0.038 Score=58.87 Aligned_cols=109 Identities=13% Similarity=0.070 Sum_probs=66.0
Q ss_pred CCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCC--CceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEee
Q 014220 127 PGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPK--NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 127 ~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~--nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
.+|.|+|||--+. .+ -++|+|+| |.||+..+. .+.|.|. ..++....-.-.++-...+|+.+|++.+
T Consensus 50 ~~G~YHlFYQ~~P-~g---WgHa~S~D-----LvhW~~~~~~~~~aL~P~--~~~D~~G~~SGSav~~~~~g~~~~~YTg 118 (634)
T 3lig_A 50 STGLFHVGFLHDG-DG---IAGATTAN-----LATYTDTSDNGSFLIQPG--GKNDPVAVFDGAVIPVGVNNTPTLLYTS 118 (634)
T ss_dssp TTCCEEEEEEETT-SC---EEEEEESS-----SSCCEESCSTTCEEECSC--SSSCSSEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCCEEEEEEecCC-Cc---eeEEEecC-----cCceeECcCCCCceecCC--CCCCCCCcEeeEEEEECCCCEEEEEEEe
Confidence 5899999998543 22 78999998 589998632 4666554 2232222223333312126788888876
Q ss_pred ec-----------CCccEEEEEEeCC-CCCcEEcc-cccccC-CCC---CeeecCceEE
Q 014220 205 KI-----------NRKGLAILYRSKD-FVHWIKAK-HPLHSV-KGT---GMWECPDFFP 246 (428)
Q Consensus 205 ~~-----------~~~G~i~ly~S~D-l~~W~~~~-~~l~~~-~~~---~~wECPdlf~ 246 (428)
.. .+.-...++.|+| +.+|+... +|+... ..+ .-|-=|.+|+
T Consensus 119 ~~~~~~~~~~~~~~~~q~Q~lA~S~D~g~~w~K~~~nPVi~~~p~g~~~~~fRDPkV~~ 177 (634)
T 3lig_A 119 VSFLPIHWSIPYTRGSETQSLAVARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFR 177 (634)
T ss_dssp ECSCCCCTTSCCCTTSEEEEEEEEEGGGTEEEECSSSCSBCSSSTTCCEEEEEEEEEEC
T ss_pred cccccccccCcCCCCcEEEEEEEECCCCCEEEECCCCceEcCCCcccCCCccCCCeEcc
Confidence 42 1122456777876 78999764 455532 222 2467788887
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.1 Score=54.49 Aligned_cols=148 Identities=12% Similarity=0.148 Sum_probs=84.7
Q ss_pred ccCCcceEEE--CCEEEEEEeeCCC-C--CCC-------C---CcEEEEEEeCC-CCCCccCCCCCCCCCCccC-CCeE-
Q 014220 58 INDPNGVMIY--KGIYHLFYQYNPK-G--AVW-------G---NIVWAHSTSKD-LINWIPHDPAIYPSQQSDI-NGCW- 119 (428)
Q Consensus 58 ~nDPng~~~~--~G~YHlFYq~~p~-~--~~~-------g---~~~Wgha~S~D-lv~W~~~~~al~P~~~~D~-~gv~- 119 (428)
.+||+ ++++ +|+-+|||.+... + ..| . .......+|+| ..+|... ..|.+...-+. ..++
T Consensus 248 ~~nP~-lvvD~~tG~I~L~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~~~~~ 325 (523)
T 4fj6_A 248 VGDPS-ILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDGKTWSEP-INITSQVKDPSWYFLLQ 325 (523)
T ss_dssp EEEEE-EEECTTTCCEEEEEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTTSSCCCC-EECHHHHCCTTCSEEEE
T ss_pred ccCce-EEEECCCCeEEEEEEecccccccccccccccCCCCCcceEEEEEEcCCCCccCCCC-eeecccccCCcceEEec
Confidence 56885 6664 6999999877532 1 111 1 13455677876 5899873 22332210001 1222
Q ss_pred -eeeEEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeE
Q 014220 120 -SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRW 198 (428)
Q Consensus 120 -SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y 198 (428)
.|+.++..+|++++--.+....+.....+.+|+|.+ .+|+... ++- ....+|.|+-. ++|+.
T Consensus 326 g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G----~TW~~~~--~~~----------~~~~e~~vve~-~dG~L 388 (523)
T 4fj6_A 326 GPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRG----KTWHLHN--LAR----------TNTTEAQVAEV-EPGVL 388 (523)
T ss_dssp CSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CSE----------ETEEEEEEEEE-ETTEE
T ss_pred CCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCC----CeEEECC--CCC----------ccccCCEEEEe-cCCEE
Confidence 356677789987642111222334455677898875 7999742 221 12468886633 47877
Q ss_pred EEEEeeecCCccEEEEEEeCC-CCCcEEc
Q 014220 199 RVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (428)
Q Consensus 199 ~Mv~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (428)
+|...+.. .|...+|+|.| +.+|+..
T Consensus 389 ~~~~R~~~--~g~r~v~~S~D~G~TWt~~ 415 (523)
T 4fj6_A 389 MLNMRDNR--GGSRAVATTKDLGKTWTEH 415 (523)
T ss_dssp EEEEEETT--CSBCEEEEESSTTSSCEEC
T ss_pred EEEEEecC--CCcEEEEEECCCCCccCcC
Confidence 77665432 24456888866 7899864
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.15 Score=52.74 Aligned_cols=145 Identities=14% Similarity=0.066 Sum_probs=84.2
Q ss_pred EECCEEEEEEeeCCC-----CCCCC--CcEEEEEE-----eCCCCCCc---cCCCCCCCCCCcc-------CCCeEeeeE
Q 014220 66 IYKGIYHLFYQYNPK-----GAVWG--NIVWAHST-----SKDLINWI---PHDPAIYPSQQSD-------INGCWSGSA 123 (428)
Q Consensus 66 ~~~G~YHlFYq~~p~-----~~~~g--~~~Wgha~-----S~Dlv~W~---~~~~al~P~~~~D-------~~gv~SGsa 123 (428)
..||+++|||..... +.... ....++|+ |.|.++++ ...+.+.|+..+. ....-...+
T Consensus 170 ~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fRDP~v 249 (496)
T 3vss_A 170 SKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFT 249 (496)
T ss_dssp CTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEE
T ss_pred CCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccCCCee
Confidence 469999999985421 11111 23566654 56777654 3445666764321 123346677
Q ss_pred EEc--CCCceEEEEcccCCC----------------------------------CcceEEEEEEcCCCCCccceeEecCC
Q 014220 124 TIL--PGEKPAIFYTGIDPH----------------------------------NRQVQNLAVPKNLSDPYLREWVKSPK 167 (428)
Q Consensus 124 v~~--~dg~~~l~YTg~~~~----------------------------------~~~~q~lA~S~D~~d~~l~~w~k~~~ 167 (428)
+.+ .+|..+|++.|+... ..-.++||...+. ++..|+-.
T Consensus 250 f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~---D~~~We~~-- 324 (496)
T 3vss_A 250 FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNK---QLTEWEFL-- 324 (496)
T ss_dssp ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESST---TSCCEEEE--
T ss_pred EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCC---CCCccEEe--
Confidence 665 368889998775321 0123556665442 36789875
Q ss_pred CceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC-----Ccc--EEEEEEeCCCC
Q 014220 168 NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-----RKG--LAILYRSKDFV 221 (428)
Q Consensus 168 nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~-----~~G--~i~ly~S~Dl~ 221 (428)
.|++... . -...+.=|.||.. +|+||++..++.. -.| .+.=|.|+.|.
T Consensus 325 ~PL~~a~--~--v~deiErP~vf~~--dGKyYLFt~s~~~t~a~~~~g~~~~yGfVSd~L~ 379 (496)
T 3vss_A 325 PPILSAN--C--VTDQTERPQIYFK--DGKSYLFTISHRGTFAAGLDGPEGVYGFVGDGIR 379 (496)
T ss_dssp EEEEEEE--T--TBSCCEEEEEEEE--TTEEEEEEEECSTTBCTTCCCCSEEEEEEESSSS
T ss_pred CccccCC--C--CCCceeCCcEEEE--CCEEEEEEecccccccccCCCCceeEEEecCCCC
Confidence 4887543 1 1245667886544 8999999987641 112 23446787665
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.23 Score=51.66 Aligned_cols=116 Identities=18% Similarity=0.173 Sum_probs=67.2
Q ss_pred eeEEEcCCCceEEEEcccCCC---CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCC--
Q 014220 121 GSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD-- 195 (428)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~-- 195 (428)
+..++..+|+|+|||.-+... +...-++|+|+| |.||+..+ +.| ++ ..+ ...-...++.. .+
T Consensus 44 PNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~D-----LvhW~~~~--~aL-~d-~~g---~~~~SGSav~~-~~~~ 110 (516)
T 3sc7_X 44 PNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTD-----LMHWAHKP--TAI-AD-ENG---VEAFTGTAYYD-PNNT 110 (516)
T ss_dssp EEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESS-----SSSCEEEE--EEE-CC-BTT---EEEEEEEEEEC-TTCT
T ss_pred CeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCC-----CCcceecC--ccc-cC-CCC---ceeEeceEEEe-CCcc
Confidence 333344589999999855322 334567899988 58999863 344 22 011 01123333322 22
Q ss_pred --------CeEEEEEeeecC--CccEEEEEEeCC-CCCcEEcc-cccccCC-----C-C--CeeecCceEEecc
Q 014220 196 --------KRWRVIIGSKIN--RKGLAILYRSKD-FVHWIKAK-HPLHSVK-----G-T--GMWECPDFFPVST 249 (428)
Q Consensus 196 --------g~y~Mv~ga~~~--~~G~i~ly~S~D-l~~W~~~~-~~l~~~~-----~-~--~~wECPdlf~l~~ 249 (428)
+.++|++.+... +.-...++.|+| ..+|+... +|+.... . . ..+.=|.+|..+.
T Consensus 111 ~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPkV~~~~~ 184 (516)
T 3sc7_X 111 SGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQ 184 (516)
T ss_dssp TSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTTSCCEECTTCCSBCHHHHTTTCTTSSSSCEEEEEEEETT
T ss_pred cccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCCceEEEcCCCceEcCCCcccccccCCCcccCCeEEEECC
Confidence 258888876542 223566788877 58999764 4554321 1 1 1467899988753
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=94.48 E-value=1.5 Score=45.81 Aligned_cols=155 Identities=16% Similarity=0.048 Sum_probs=83.0
Q ss_pred eEEE-CCEEEEEEeeCCCCCC-CCCcEEEEEEeCCC-CCCccCCCCCCCCC-CccCCCeEeeeEEEc-CCCceEEEEccc
Q 014220 64 VMIY-KGIYHLFYQYNPKGAV-WGNIVWAHSTSKDL-INWIPHDPAIYPSQ-QSDINGCWSGSATIL-PGEKPAIFYTGI 138 (428)
Q Consensus 64 ~~~~-~G~YHlFYq~~p~~~~-~g~~~Wgha~S~Dl-v~W~~~~~al~P~~-~~D~~gv~SGsav~~-~dg~~~l~YTg~ 138 (428)
++.. +|....|+...+.... .+........|+|. .+|..... |..+. .-...++..++.+++ .+|+++|+|...
T Consensus 26 L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG~TW~~~~~-l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~~ 104 (601)
T 1w8o_A 26 LTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQV-VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYS 104 (601)
T ss_dssp EEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEE-EECCBCSSSCBEEEEEEEEECTTTCCEEEEEEEE
T ss_pred EEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCCCCCCCCEE-EecCccCCCCCccccceEEEECCCCeEEEEEEee
Confidence 4444 6788888877765432 34556778889986 79997643 33321 111234566666665 378999988742
Q ss_pred CC-------------C-CcceEEEEEEcCCCCCccceeEecCCCceecCCC-CCCCCCCCccCCeEEEECC----CCeEE
Q 014220 139 DP-------------H-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDA-MNQINTSSFRDPTTAWLGP----DKRWR 199 (428)
Q Consensus 139 ~~-------------~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~-~~~~~~~~~RDP~V~~~~~----~g~y~ 199 (428)
.. + ......+..|.|++ ++|.+.. .+.... .+++ ...+..|--...-. .|+.+
T Consensus 105 ~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G----~TWs~~~---~~~~~~~~~~~-~~~~~~~g~gi~~~~~~~~G~l~ 176 (601)
T 1w8o_A 105 QRQGFAGSRPGTDPADPNVLHANVATSTDGG----LTWSHRT---ITADITPDPGW-RSRFAASGEGIQLRYGPHAGRLI 176 (601)
T ss_dssp SSCCTTTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEEE---CGGGSCCSTTC-CEEEECSEECEECCSSTTTTCEE
T ss_pred cCCCccccccCCCccCCceEEEEEEEecCCC----CCCCCcc---cccccccCCCe-eEEEecCCeEEEccCCCcCceEE
Confidence 11 0 11235678898875 7999742 221110 0121 11223342111112 36666
Q ss_pred EEEeeecCC-ccEEEEEEeCC-CCCcEEcc
Q 014220 200 VIIGSKINR-KGLAILYRSKD-FVHWIKAK 227 (428)
Q Consensus 200 Mv~ga~~~~-~G~i~ly~S~D-l~~W~~~~ 227 (428)
+.+...... .....++.|+| ..+|+...
T Consensus 177 ~~~~~~~g~~~~~~~~~~S~D~G~TW~~~~ 206 (601)
T 1w8o_A 177 QQYTIINAAGAFQAVSVYSDDHGRTWRAGE 206 (601)
T ss_dssp EEEEEECTTSCEEEEEEEESSTTSSCEECC
T ss_pred EEEEEcCCCCceeEEEEEECCCCcCccCCC
Confidence 544332211 12455666766 89999753
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=92.62 E-value=0.65 Score=46.10 Aligned_cols=138 Identities=14% Similarity=0.117 Sum_probs=78.5
Q ss_pred CccCCcceEEE-CCEEEEEEeeCCCC-----CC--------------C-CCcEEEEEEeCC-CCCCccCCCCCCCC---C
Q 014220 57 WINDPNGVMIY-KGIYHLFYQYNPKG-----AV--------------W-GNIVWAHSTSKD-LINWIPHDPAIYPS---Q 111 (428)
Q Consensus 57 w~nDPng~~~~-~G~YHlFYq~~p~~-----~~--------------~-g~~~Wgha~S~D-lv~W~~~~~al~P~---~ 111 (428)
-..+|. ++.. +|+.+||+.+++.. .. | .......++|+| ..+|.... .|.+. .
T Consensus 101 ~~~~Pt-~v~~~~g~I~l~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G~TWs~p~-~l~~~~~~~ 178 (386)
T 2xzi_A 101 TWGNPT-PVVDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDGNTWSKPV-DLTKELTPD 178 (386)
T ss_dssp EEEEEE-EEECTTSCEEEEEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTTSCCCCCE-ECHHHHSCT
T ss_pred cccccE-EEEeCCCCEEEEEEeccccccccCcceeccCceecccccccccccEEEEEEECCCCccCCCcc-cCccccccc
Confidence 345674 5556 79999999654321 00 1 123455677887 68998532 22111 1
Q ss_pred CccCCCeEeeeEEEcCCCceEEEEcccCCCCcceEEEEEEcC--CCCCccceeEecCCCceecCCCCCCCCCCCccCCeE
Q 014220 112 QSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKN--LSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTT 189 (428)
Q Consensus 112 ~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D--~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V 189 (428)
.+.....-.|+.|...+|++++-.. ..+.+|+| ++ .+|+... ++ . . -.+|.|
T Consensus 179 ~~~~~~~~~g~gI~l~dGrLv~p~~---------~~~~~S~D~~~G----~tW~~~~--~~-~-~---------~~e~~v 232 (386)
T 2xzi_A 179 GWAWDAVGPGNGIRLTTGELVIPAM---------GRNIIGRGAPGN----RTWSVQR--LS-G-A---------GAEGTI 232 (386)
T ss_dssp TCCSCCBCSSCCEECTTSCEEEEET---------TEEEEEESSTTS----CEEEEEE--CT-T-C---------CSSEEE
T ss_pred cceeeccCCccEEEecCCEEEEEeE---------EEEEEccCCCCC----CcccccC--cC-C-C---------CCcCEE
Confidence 2222112224556667888766443 24667888 65 7998642 21 1 1 147776
Q ss_pred EEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEc
Q 014220 190 AWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKA 226 (428)
Q Consensus 190 ~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~ 226 (428)
+-. ++|+.+|+.... ..+...+|+|.| .+|+..
T Consensus 233 ve~-~dG~L~~~~r~~--~g~~r~v~~S~D-~tWt~~ 265 (386)
T 2xzi_A 233 VQT-PDGKLYRNDRPS--QKGYRMVARGTL-EGFGAF 265 (386)
T ss_dssp EEC-TTSCEEEEECCS--SSEEEEEEEEET-TEECCC
T ss_pred EEe-CCCcEEEEEeCC--CCccEEEEEEeC-CccCcc
Confidence 533 578877766332 222567999999 999854
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=92.13 E-value=2.2 Score=44.24 Aligned_cols=171 Identities=15% Similarity=0.055 Sum_probs=90.6
Q ss_pred eEE-ECCEEEEEEeeCCCCCC--CCCcEEEEEEeCCC-CCCccCCCCCCCCC----CccCCCeEeeeEEEcC-CCceEEE
Q 014220 64 VMI-YKGIYHLFYQYNPKGAV--WGNIVWAHSTSKDL-INWIPHDPAIYPSQ----QSDINGCWSGSATILP-GEKPAIF 134 (428)
Q Consensus 64 ~~~-~~G~YHlFYq~~p~~~~--~g~~~Wgha~S~Dl-v~W~~~~~al~P~~----~~D~~gv~SGsav~~~-dg~~~l~ 134 (428)
+++ -+|+...||-..+.+.. .+........|+|. .+|.....+....+ +-...++..++.+++. +|++++|
T Consensus 186 L~~~~~G~Lla~~~~r~~~~~D~~~~i~i~~~rS~DgG~tWs~~~~v~~~~~~~~~~~~~~~~~nP~lvvD~~tG~I~L~ 265 (523)
T 4fj6_A 186 LVTTNNGTLLGVYDIRYNSSVDLQEKIDIGVSRSTDKGQTWEPMRVAMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWVV 265 (523)
T ss_dssp EEECTTSCEEEEEEEESSCSCCSSSSEEEEEEEESSTTSSCCCCEEEECCTTGGGCCGGGSCEEEEEEEECTTTCCEEEE
T ss_pred eEECCCCcEEEEEeceeccCCCCcCcEEEEEEEeCCCCCEeCCcEEeecccccccCccccccccCceEEEECCCCeEEEE
Confidence 444 38888888876544332 24556777889885 79986543332221 1123578889998865 7999999
Q ss_pred EcccCC----------------CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCe-EEEECCCCe
Q 014220 135 YTGIDP----------------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPT-TAWLGPDKR 197 (428)
Q Consensus 135 YTg~~~----------------~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~-V~~~~~~g~ 197 (428)
|+.... .......+..|.|+| ++|.+.. .+......+.+ ..-+.-|- -+-. ++|+
T Consensus 266 ~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G----~TWs~p~--~l~~~~~~~~~-~~~~~g~G~GI~l-~dGr 337 (523)
T 4fj6_A 266 AAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDG----KTWSEPI--NITSQVKDPSW-YFLLQGPGRGITM-QDGT 337 (523)
T ss_dssp EEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTT----SSCCCCE--ECHHHHCCTTC-SEEEECSEECEEC-TTSC
T ss_pred EEecccccccccccccccCCCCCcceEEEEEEcCCCC----ccCCCCe--eecccccCCcc-eEEecCCCcceEE-eCCe
Confidence 863210 011345678898875 8997631 11110000111 00111220 0112 5777
Q ss_pred EEEEEeeec-CCccEEE-EEEeCCCCCcEEcccccccCCCCCeeecCceEEec
Q 014220 198 WRVIIGSKI-NRKGLAI-LYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (428)
Q Consensus 198 y~Mv~ga~~-~~~G~i~-ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~ 248 (428)
+++-+-... ++..... +|+.++..+|+... ... ..+. -|.++++.
T Consensus 338 Lv~P~~~~~~~g~~~s~i~~S~D~G~TW~~~~-~~~----~~~~-e~~vve~~ 384 (523)
T 4fj6_A 338 LVFPIQFIDATRVPNAGIMYSKDRGKTWHLHN-LAR----TNTT-EAQVAEVE 384 (523)
T ss_dssp EEEEEEEECTTSCEEEEEEEESSTTSSCEECC-CSE----ETEE-EEEEEEEE
T ss_pred EEEEEEEEcCCCCEEEEEEEECCCCCeEEECC-CCC----cccc-CCEEEEec
Confidence 765544333 2222333 45445589999743 222 1233 35688876
|
| >2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* | Back alignment and structure |
|---|
Probab=91.98 E-value=1.1 Score=45.82 Aligned_cols=127 Identities=18% Similarity=0.213 Sum_probs=67.6
Q ss_pred EEEEEeCC-CCCCccCCCCCCCC--CCccCC-CeEeeeEEEcCC----CceEE-EEcccCC---CCcceEEEEEEcCCCC
Q 014220 89 WAHSTSKD-LINWIPHDPAIYPS--QQSDIN-GCWSGSATILPG----EKPAI-FYTGIDP---HNRQVQNLAVPKNLSD 156 (428)
Q Consensus 89 Wgha~S~D-lv~W~~~~~al~P~--~~~D~~-gv~SGsav~~~d----g~~~l-~YTg~~~---~~~~~q~lA~S~D~~d 156 (428)
.-..+|+| ..+|... ..|.+. ..+... +.-.|+.++..+ |++++ +|+.... .+.....+.+|+|.+
T Consensus 216 ~~~~~S~D~G~TWs~p-~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G- 293 (471)
T 2w20_A 216 LWMSYSDDDGKTWSAP-QDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHG- 293 (471)
T ss_dssp EEEEEESSTTSSCCCC-EECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTT-
T ss_pred EEEEEECCCcCcCCCC-cccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCC-
Confidence 44577888 5899863 223221 111111 111344555555 77765 4543211 122345678999875
Q ss_pred CccceeEecCCCceecCCCCCC-------CC--CCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCC-CCCcEEc
Q 014220 157 PYLREWVKSPKNPLMAPDAMNQ-------IN--TSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (428)
Q Consensus 157 ~~l~~w~k~~~nPvi~~~~~~~-------~~--~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (428)
.+|+... ++-......+ +. .....+|.|+ .-++|+.+|+... ..|.+.+|+|.| ..+|+..
T Consensus 294 ---~TW~~~~--~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vv-e~~dG~L~~~~R~---~~G~~~v~~S~DgG~TWs~~ 364 (471)
T 2w20_A 294 ---KTWHAGE--AVNDNRQVDGQKIHSSTMNNRRAQNTESTVV-QLNNGDVKLFMRG---LTGDLQVATSKDGGVTWEKD 364 (471)
T ss_dssp ---SSCEECC--CTTTTEEETTEEECTTTCCCGGGCCCSEEEE-ECTTSCEEEEECC---SSSEEEEEEESSSSSSCCSC
T ss_pred ---CCcccCC--ccCcccccCccccccccccccCcCccCCEEE-EcCCCeEEEEEEe---CCCCEEEEEEcCCCcCCCCc
Confidence 7999753 2211100000 00 0124688865 3367887777632 246678999977 7899853
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=91.80 E-value=0.92 Score=45.94 Aligned_cols=126 Identities=12% Similarity=0.157 Sum_probs=67.3
Q ss_pred EEEEEEeCC-CCCCccCCCCCCCC--CCccCC-CeEeeeEEEcCC----CceEE-EEcccCCCCcceEEEEEEcCCCCCc
Q 014220 88 VWAHSTSKD-LINWIPHDPAIYPS--QQSDIN-GCWSGSATILPG----EKPAI-FYTGIDPHNRQVQNLAVPKNLSDPY 158 (428)
Q Consensus 88 ~Wgha~S~D-lv~W~~~~~al~P~--~~~D~~-gv~SGsav~~~d----g~~~l-~YTg~~~~~~~~q~lA~S~D~~d~~ 158 (428)
.....+|+| ..+|.... .|.+. ..+... +.-.|+.+...+ |++++ .+... ..+.....+.+|+|++
T Consensus 188 ~~~~~~S~D~G~TWs~p~-~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~-~~g~~~~~v~~S~D~G--- 262 (449)
T 2bf6_A 188 YINLVYSDDDGKTWSEPQ-NINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTN-EKGKQSSAVIYSDDSG--- 262 (449)
T ss_dssp EEEEEEESSTTSSCCCCE-ECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEEC-TTCCEEEEEEEESSTT---
T ss_pred EEEEEEEcCCCccCCCCc-cCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEc-CCCCEEEEEEEECCCC---
Confidence 345678887 58998632 22211 111111 223355555554 67665 34322 1233455678998875
Q ss_pred cceeEecCCCceecCC-CCCC-------C--CCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCC-CCCcEE
Q 014220 159 LREWVKSPKNPLMAPD-AMNQ-------I--NTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIK 225 (428)
Q Consensus 159 l~~w~k~~~nPvi~~~-~~~~-------~--~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~D-l~~W~~ 225 (428)
.+|+... ++.... ...+ + ...+..+|.|+-. ++|+.+|+.... .|.+.+|+|.| ..+|+.
T Consensus 263 -~tW~~~~--~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vve~-~dG~l~~~~R~~---~g~~~v~~S~D~G~TWs~ 333 (449)
T 2bf6_A 263 -KNWTIGE--SPNDNRKLENGKIINSKTLSDDAPQLTECQVVEM-PNGQLKLFMRNL---SGYLNIATSFDGGATWDE 333 (449)
T ss_dssp -SSCEECC--CTTTTEECTTSCEECTTTCCCSTTCEEEEEEEEC-TTSCEEEEEEES---SSEEEEEEESSTTSCCCS
T ss_pred -CceeECC--ccCcccccccccccccccccccCCCCCCCEEEEe-cCCEEEEEEEeC---CCCEEEEEECCCCccccC
Confidence 7999753 211100 0000 0 0123457776543 678888875432 46788999976 789974
|
| >2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* | Back alignment and structure |
|---|
Probab=90.48 E-value=1.7 Score=46.63 Aligned_cols=116 Identities=11% Similarity=0.084 Sum_probs=65.8
Q ss_pred EEEEEeCC-CCCCccCCCCCCCCCCccCCCeE--eeeEEEcCC----CceEE-EEcccCCCCcceEEEEEEcCCCCCccc
Q 014220 89 WAHSTSKD-LINWIPHDPAIYPSQQSDINGCW--SGSATILPG----EKPAI-FYTGIDPHNRQVQNLAVPKNLSDPYLR 160 (428)
Q Consensus 89 Wgha~S~D-lv~W~~~~~al~P~~~~D~~gv~--SGsav~~~d----g~~~l-~YTg~~~~~~~~q~lA~S~D~~d~~l~ 160 (428)
+-..+|+| ..+|..... |.+...-.....+ .|+.+...+ |++++ .++... ....+.+|+|++ .
T Consensus 428 i~v~~S~DgG~TWs~p~~-l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~----~~s~i~~SdDgG----~ 498 (679)
T 2sli_A 428 LAMRYSDDEGASWSDLDI-VSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSS----AELGFMYSDDHG----D 498 (679)
T ss_dssp EEEEEESSTTSSCCCCEE-CGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESS----CSEEEEEESSTT----S
T ss_pred EEEEEeCCCCccCCCCcc-cCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCC----CEEEEEEECCCC----C
Confidence 44567887 589997532 2221100111222 244555555 77665 343321 235678899876 7
Q ss_pred eeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCC-CCCcEEc
Q 014220 161 EWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (428)
Q Consensus 161 ~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (428)
+|++.. .+. + .+ ....+|.|+ .-++|+.+|+.... .|.+.+|+|.| ..+|+..
T Consensus 499 TW~~~~--~~~--p--~~---~~~~e~~vv-e~~dG~L~~~~R~~---~G~~~v~~S~DgG~TWt~~ 552 (679)
T 2sli_A 499 NWTYVE--ADN--L--TG---GATAEAQIV-EMPDGSLKTYLRTG---SNCIAEVTSIDGGETWSDR 552 (679)
T ss_dssp SCEEEE--CCC--C--CS---CCCCCEEEE-ECTTSCEEEEECCS---SSSCEEEEESSTTSSCCCC
T ss_pred ceEeCc--cCC--C--CC---CCccceEEE-EeCCCEEEEEEEeC---CCCEEEEEEcCCCcCCCCC
Confidence 999853 111 1 11 245688865 33678888776432 35667899987 7899864
|
| >3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A* | Back alignment and structure |
|---|
Probab=89.88 E-value=4.5 Score=40.14 Aligned_cols=147 Identities=12% Similarity=0.086 Sum_probs=79.5
Q ss_pred CccCCcceEEE-CC--EEEEEEee-CCCCCCC---------CCcEEEEEEeCC-CCCCccCCCCCCCC-----CCccCCC
Q 014220 57 WINDPNGVMIY-KG--IYHLFYQY-NPKGAVW---------GNIVWAHSTSKD-LINWIPHDPAIYPS-----QQSDING 117 (428)
Q Consensus 57 w~nDPng~~~~-~G--~YHlFYq~-~p~~~~~---------g~~~Wgha~S~D-lv~W~~~~~al~P~-----~~~D~~g 117 (428)
-..||.-++-. .| +.+||+-. +.....| .....-.++|+| .++|.+.. .+.+. ..+-..-
T Consensus 94 ~v~~Pt~vv~~~tG~~~I~llvg~~~~~~~~~~~~~~~~~~~~~~l~lv~S~D~G~tWs~~~-~~~~~~~~~~~~~~~~~ 172 (379)
T 3sil_A 94 RVMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVE-TNIHDIVTKNGTISAML 172 (379)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEEC-CSHHHHHHHHCSEEEEE
T ss_pred eEecCceEEeCCCCCeeEEEEEEeecCCCcceeeccccCCCCceeEEEEEccCCCCcCCCCc-ccccccccccceeeeec
Confidence 35788644433 47 88887542 2211111 123345677777 58998732 11111 1111111
Q ss_pred eEeeeEEEcCCCceEE-EEcccCC--CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECC
Q 014220 118 CWSGSATILPGEKPAI-FYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP 194 (428)
Q Consensus 118 v~SGsav~~~dg~~~l-~YTg~~~--~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~ 194 (428)
.-.|+.|+..+|++++ .+..... .+.....+.+|+| + .+|+... ++ .+ ....+|.|+-.
T Consensus 173 ~g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G----~tW~~~~--~~-~~--------~~~~ep~vvE~-- 234 (379)
T 3sil_A 173 GGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-G----ITWSLPS--GY-CE--------GFGSENNIIEF-- 234 (379)
T ss_dssp ECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-S----SSEECCS--CC-EE--------CTTCCEEEEEE--
T ss_pred CCCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-C----CCeEECC--CC-CC--------ccCCCCEEEEE--
Confidence 1246677778998765 2221111 2334455678888 5 7998642 22 11 23479997744
Q ss_pred CCeEEEEEeeecCCccEEEEEEeCC-CCCcEEc
Q 014220 195 DKRWRVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (428)
Q Consensus 195 ~g~y~Mv~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (428)
+|+.+|+... .|...+|.|.| ..+|+..
T Consensus 235 dG~L~m~~R~----~g~r~v~~S~D~G~tWt~~ 263 (379)
T 3sil_A 235 NASLVNNIRN----SGLRRSFETKDFGKTWTEF 263 (379)
T ss_dssp TTEEEEEECC----SSBCBCEEESSSSSCCEEC
T ss_pred CCEEEEEEEe----CCCEEEEEEcCCCccCCCC
Confidence 6887777754 24445788855 6899964
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=88.76 E-value=2.8 Score=43.63 Aligned_cols=102 Identities=13% Similarity=0.061 Sum_probs=62.4
Q ss_pred eEeeeEEEcCCCceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEEC
Q 014220 118 CWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG 193 (428)
Q Consensus 118 v~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~ 193 (428)
.-.++.+..++|.++++|.+.... ....+.+..|.|++ ++|.+. .++.... .......+.||.++...
T Consensus 21 ~~~P~L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG----~TW~~~---~~l~~~~-~~~~~~~~~~P~~~~d~ 92 (601)
T 1w8o_A 21 YRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ---QVVSAGQ-TTAPIKGFSDPSYLVDR 92 (601)
T ss_dssp EEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC---EEEECCB-CSSSCBEEEEEEEEECT
T ss_pred EeEeeEEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCC----CCCCCC---EEEecCc-cCCCCCccccceEEEEC
Confidence 346777776689999999876432 12246778898876 799863 2332210 00112346789865443
Q ss_pred CCCeEEEEEeeecC---------------CccEEEEEEeCC-CCCcEEcc
Q 014220 194 PDKRWRVIIGSKIN---------------RKGLAILYRSKD-FVHWIKAK 227 (428)
Q Consensus 194 ~~g~y~Mv~ga~~~---------------~~G~i~ly~S~D-l~~W~~~~ 227 (428)
.+|+.+|+++.... ....+.+++|+| .++|+...
T Consensus 93 ~~g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G~TWs~~~ 142 (601)
T 1w8o_A 93 ETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (601)
T ss_dssp TTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CCCeEEEEEEeecCCCccccccCCCccCCceEEEEEEEecCCCCCCCCcc
Confidence 57888888765321 113567788865 78998643
|
| >2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A* | Back alignment and structure |
|---|
Probab=87.68 E-value=6.3 Score=42.24 Aligned_cols=114 Identities=18% Similarity=0.232 Sum_probs=61.3
Q ss_pred EEEEeCC-CCCCccCCCCCCCCCCccCCCeE--eeeEEE-cCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEec
Q 014220 90 AHSTSKD-LINWIPHDPAIYPSQQSDINGCW--SGSATI-LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKS 165 (428)
Q Consensus 90 gha~S~D-lv~W~~~~~al~P~~~~D~~gv~--SGsav~-~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~ 165 (428)
...+|+| ..+|.... .|.+.........+ .|+.+. ..+|++++.+... ....+.+|.|++ ++|++.
T Consensus 449 ~v~rS~DgG~TWs~p~-~l~~~~~~~~~~~~~~pg~GI~~~~~GrLv~p~~~~-----~~s~v~~S~DgG----~TW~~~ 518 (686)
T 2jkb_A 449 AMTTSQNRGESWEQFK-LLPPFLGEKHNGTYLCPGQGLALKSSNRLIFATYTS-----GELTYLISDDSG----QTWKKS 518 (686)
T ss_dssp EEEEESSTTSCCCCCE-ECCCSSCTTSCCCEECSEECEECTTSSCEEEEEEET-----TEEEEEEESSTT----SSCEEE
T ss_pred EEEEECCCCCcCCCCe-ecccccCcccceeeeCCCcceEEccCCeEEEEEecC-----CcEEEEEECCCC----CeeEeC
Confidence 4456777 47998742 23221110011112 233343 3478776644322 234678999976 899985
Q ss_pred CCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCC-CCCcEEc
Q 014220 166 PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (428)
Q Consensus 166 ~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (428)
. .+. +. + ...-.|.++-. .+|..+|+.... .|.+.+++|.| ..+|+..
T Consensus 519 ~--~~~-p~---~---~~~~e~~ivel-~dG~L~~~~R~~---~G~~~v~~S~DgG~TWs~~ 567 (686)
T 2jkb_A 519 S--ASI-PF---K---NATAEAQMVEL-RDGVIRTFFRTT---TGKIAYMTSRDSGETWSKV 567 (686)
T ss_dssp E--EEC-SC---S---SCCCCEEEEEE-ETTEEEEEECCS---SSSCEEEEESSTTSSCCCC
T ss_pred c--ccC-CC---C---CCceeeEEEEe-cCCEEEEEEEcC---CCcEeEEEeCCCCCCCccc
Confidence 2 222 11 1 12235665433 578877765332 24556888977 7899854
|
| >1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... | Back alignment and structure |
|---|
Probab=86.52 E-value=3.2 Score=44.16 Aligned_cols=150 Identities=12% Similarity=0.138 Sum_probs=80.8
Q ss_pred CCccCCcceEEECCEEEEEEe-eCCCCCC----CCCcEEEE------E-EeCC-CC-----CCccCCCCCCCC--CCccC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQ-YNPKGAV----WGNIVWAH------S-TSKD-LI-----NWIPHDPAIYPS--QQSDI 115 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq-~~p~~~~----~g~~~Wgh------a-~S~D-lv-----~W~~~~~al~P~--~~~D~ 115 (428)
.-+.||. ++..+|+.+||+- ++..... .+...|+. + .|+| .. +|.+. ..|.+. ..+..
T Consensus 106 ~~v~~PT-tVv~gg~I~LL~g~y~~~~~~~~~~~~~~~~~llLVkG~V~~S~D~Gktsk~ItWs~p-~~L~~~~~~~~~~ 183 (648)
T 1ms9_A 106 SRVVDPT-VIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGSP-VSLKEFFPAEMEG 183 (648)
T ss_dssp CEEEEEE-EEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECCC-EECGGGCCSBSSS
T ss_pred eEeeccc-eeeecccEEEEEEeecCCcccccccccCCCcceEEEEeeeccccccccccceeeccCc-ccCcccccccccc
Confidence 3466886 5558899999983 3332111 12234554 2 4765 33 69853 223221 11110
Q ss_pred ---CCe--EeeeEEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEE
Q 014220 116 ---NGC--WSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTA 190 (428)
Q Consensus 116 ---~gv--~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~ 190 (428)
... -.|+.|+..||++++=-.+....+.....+.+|+|.+ .+|+... ++ ++ ....+|.|+
T Consensus 184 ~~~~~~~~GgGsGI~m~dGtLVfPv~~~~~~g~~~s~iiySdD~G----~TW~ls~--~~--~~-------~gc~EpsVv 248 (648)
T 1ms9_A 184 MHTNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFGK--GR--SA-------FGCSEPVAL 248 (648)
T ss_dssp SBEEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEECS--CC--CC-------TTEEEEEEE
T ss_pred ceeEEEEecCCceEEecCCcEEEEEEEEcccccceeeEEEecCCC----CCEEECC--CC--CC-------CCccceEEE
Confidence 111 1366677789987652111122233444567888865 7899743 21 11 235799977
Q ss_pred EECCCCeEEEEEeeecCCccEEEEEEeCC-CCCcEEcc
Q 014220 191 WLGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKAK 227 (428)
Q Consensus 191 ~~~~~g~y~Mv~ga~~~~~G~i~ly~S~D-l~~W~~~~ 227 (428)
-. +|+-+|+... . .|+..+|+|.| ...|+...
T Consensus 249 Ew--dG~Lmm~~R~-~--~g~R~Vy~S~D~G~TWte~~ 281 (648)
T 1ms9_A 249 EW--EGKLIINTRV-D--YRRRLVYESSDMGNTWLEAV 281 (648)
T ss_dssp EE--TTEEEEEEEE-T--TSCCCEEEESSTTSSCEECT
T ss_pred EE--CCEEEEEEEc-c--CCcEEEEEecCCCccccccc
Confidence 44 5775444433 2 24456888877 78998654
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=86.51 E-value=6.8 Score=38.60 Aligned_cols=70 Identities=14% Similarity=0.167 Sum_probs=44.6
Q ss_pred ceEEE-CCEEEEEEeeCCCC-CCCCCcEEEEEEeC---CC----CCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEE
Q 014220 63 GVMIY-KGIYHLFYQYNPKG-AVWGNIVWAHSTSK---DL----INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133 (428)
Q Consensus 63 g~~~~-~G~YHlFYq~~p~~-~~~g~~~Wgha~S~---Dl----v~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l 133 (428)
+++.. +|..-.|+-..+.. ..++...+....|+ |. .+|.... .|.... ...+..++.+++.+|+++|
T Consensus 42 sLv~~~~G~l~A~~e~~~~~~~d~g~~~i~~~rS~~~~D~G~~~~tW~~~~-~l~~~~---~~~~~~Pt~v~~~~g~I~l 117 (386)
T 2xzi_A 42 AVVRTTTGRILAFAEGRRHTNQDFGDINLVYKRTKTTANNGASPSDWEPLR-EVVGSG---AGTWGNPTPVVDDDNTIYL 117 (386)
T ss_dssp EEEECTTSCEEEEEEEESSSSCSSSSEEEEEEEBSSSSSTTCSGGGBCCCE-EEECCS---SSEEEEEEEEECTTSCEEE
T ss_pred EEEEeCCCcEEEEEEeeeCCCCCCCceeEEEEEeeeecCCCcCceeccCcE-EEeeCC---CCcccccEEEEeCCCCEEE
Confidence 35555 78777888655542 23456678888898 86 7998543 333322 2345566666644789999
Q ss_pred EEc
Q 014220 134 FYT 136 (428)
Q Consensus 134 ~YT 136 (428)
+|+
T Consensus 118 ~~~ 120 (386)
T 2xzi_A 118 FLS 120 (386)
T ss_dssp EEE
T ss_pred EEE
Confidence 995
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=84.16 E-value=5.4 Score=40.20 Aligned_cols=77 Identities=9% Similarity=0.001 Sum_probs=46.5
Q ss_pred CCeE-eeeEEEcCCCceEEEEcccCCC--C---c-ceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCe
Q 014220 116 NGCW-SGSATILPGEKPAIFYTGIDPH--N---R-QVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPT 188 (428)
Q Consensus 116 ~gv~-SGsav~~~dg~~~l~YTg~~~~--~---~-~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~ 188 (428)
..+| .++.+..++|.++++|.+.... . . ..+.+..|.|++ .+|.+. ..|...+ + ...+-||.
T Consensus 20 ~~~~riP~l~~~~~G~lla~~~~r~~~~~d~~~~~~~i~~~rS~DgG----~TWs~~--~~v~~~~---~--~~~~~dp~ 88 (449)
T 2bf6_A 20 SSNYRIPALFKTKEGTLIASIDARRHGGADAPNNDIDTAVRRSEDGG----KTWDEG--QIIMDYP---D--KSSVIDTT 88 (449)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEETTSSCCTTSSCEEEEEEEESSTT----SSCCCC--EEEECCS---T--TCEEEEEE
T ss_pred CceEEcceEEECCCCCEEEEEeCccCccccCCCCcceEEEEEcCCCC----CCCCCC--EEeecCC---C--ccccccce
Confidence 3456 4777666799999999865321 1 1 246788999976 799863 2333333 1 24567887
Q ss_pred EEEECCCCeEEEEEe
Q 014220 189 TAWLGPDKRWRVIIG 203 (428)
Q Consensus 189 V~~~~~~g~y~Mv~g 203 (428)
++-..++|+-+|++.
T Consensus 89 l~~d~~~G~i~l~~~ 103 (449)
T 2bf6_A 89 LIQDDETGRIFLLVT 103 (449)
T ss_dssp EEECTTTCCEEEEEE
T ss_pred eEEECCCCeEEEEEe
Confidence 443323566665553
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=83.44 E-value=4.8 Score=39.33 Aligned_cols=100 Identities=8% Similarity=0.038 Sum_probs=58.8
Q ss_pred CeE-eeeEE-EcCCCceEEEEcccCC--CC-cceEEEEEEcCCCCCccc----eeEecCCCceecCCCCCCCCCCCccCC
Q 014220 117 GCW-SGSAT-ILPGEKPAIFYTGIDP--HN-RQVQNLAVPKNLSDPYLR----EWVKSPKNPLMAPDAMNQINTSSFRDP 187 (428)
Q Consensus 117 gv~-SGsav-~~~dg~~~l~YTg~~~--~~-~~~q~lA~S~D~~d~~l~----~w~k~~~nPvi~~~~~~~~~~~~~RDP 187 (428)
.+| .++.+ ...+|.+++++.+... +. ...+.+..|.|++ + +|++. .++... . .....+.+|
T Consensus 20 ~s~riP~Lv~~~~~G~l~a~~e~~~~~~~~~~~~i~~~rS~D~G----~~~~~tW~~~---~~~~~~--~-~~~~~~~~P 89 (382)
T 1so7_A 20 HAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDA----PTHQVQWQAQ---EVVAQA--R-LDGHRSMNP 89 (382)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEG----GGTEEEECCC---EECTTS--C-CTTEEEEEE
T ss_pred eEEEeCeEEEECCCCeEEEEEccCcCCCCCCCCEEEEEEeeeCC----ccccceeCCc---EEeccC--C-CCCCccccc
Confidence 345 46666 5568999999887542 11 1125667788865 7 99852 233221 1 112347899
Q ss_pred eEEEECCCCeEEEEEeeecC------------CccEEEEEEeCC-CCCcEEc
Q 014220 188 TTAWLGPDKRWRVIIGSKIN------------RKGLAILYRSKD-FVHWIKA 226 (428)
Q Consensus 188 ~V~~~~~~g~y~Mv~ga~~~------------~~G~i~ly~S~D-l~~W~~~ 226 (428)
.++...++|+-+|+++.... ....+.+++|+| .++|+..
T Consensus 90 ~~v~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~ 141 (382)
T 1so7_A 90 CPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSP 141 (382)
T ss_dssp EEEECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCC
T ss_pred eEEEECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCC
Confidence 86665446788877764421 123567888865 7899753
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=83.03 E-value=2.6 Score=41.29 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=78.7
Q ss_pred ccCCcceEEE--CCEEEEEEeeCCCCC-C-------CCCcEEEEEEeCC-CCCCccCCCCCCCCC--C-ccC-CCeE--e
Q 014220 58 INDPNGVMIY--KGIYHLFYQYNPKGA-V-------WGNIVWAHSTSKD-LINWIPHDPAIYPSQ--Q-SDI-NGCW--S 120 (428)
Q Consensus 58 ~nDPng~~~~--~G~YHlFYq~~p~~~-~-------~g~~~Wgha~S~D-lv~W~~~~~al~P~~--~-~D~-~gv~--S 120 (428)
..+|. +++. +|+.+|||.+.+... . .........+|+| ..+|.... .|.+.. . ... .... .
T Consensus 86 ~~~P~-~v~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~~-~l~~~~~g~~~~~~~~~~~~p 163 (382)
T 1so7_A 86 SMNPC-PLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPR-DLTDAAIGPAYREWSTFAVGP 163 (382)
T ss_dssp EEEEE-EEECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCCE-ECHHHHHGGGGGGEEEEEECS
T ss_pred cccce-EEEECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCCc-cCChhhcCCCCCCceeeccCC
Confidence 45674 4443 589999997665221 1 1123456778887 58998642 222111 0 000 0111 2
Q ss_pred eeEEEcCC--CceEE-EEcccCC----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEE-E-
Q 014220 121 GSATILPG--EKPAI-FYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTA-W- 191 (428)
Q Consensus 121 Gsav~~~d--g~~~l-~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~-~- 191 (428)
|+.|...+ |++++ .+..... .......+.+|+|++ .+|+... + +... ...+.++ +
T Consensus 164 g~gi~l~~~~G~lv~p~~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~-~~~~---------~~~~~~~~~~ 227 (382)
T 1so7_A 164 GHCLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHG----RTWARGH--F-VAQD---------TLECQVAEVE 227 (382)
T ss_dssp SCCEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTT----SSCEECC--C-CSBS---------EEEEEEEEEE
T ss_pred CcEeecccCCCcEEEEEEEecccccccCCCceeEEEEECCCC----ceeEcCc--c-cCCC---------CCccEEEEEE
Confidence 35566667 88766 5543221 123445678898875 7999853 2 2110 1122222 1
Q ss_pred ECCCCeEEEEEeeecCCccEEEEEEeCC-CCCcEEc
Q 014220 192 LGPDKRWRVIIGSKINRKGLAILYRSKD-FVHWIKA 226 (428)
Q Consensus 192 ~~~~g~y~Mv~ga~~~~~G~i~ly~S~D-l~~W~~~ 226 (428)
...+|+.+|+.... .|...+|+|.| ..+|+..
T Consensus 228 ~~~dg~l~~~~r~~---~g~~~v~~S~D~G~tW~~~ 260 (382)
T 1so7_A 228 TGEQRVVTLNARSH---LRARVQAQSTNDGLDFQES 260 (382)
T ss_dssp C--CEEEEEEEEES---SSEEEEEEESSTTSSCCCC
T ss_pred ECCCCEEEEEEecC---CCCEEEEEEcCCCCCCCCC
Confidence 11467777766432 24678999977 7899854
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 428 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 3e-95 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 3e-77 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 8e-32 | |
| d1vkda_ | 327 | b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot | 0.001 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 288 bits (737), Expect = 3e-95
Identities = 97/363 (26%), Positives = 138/363 (38%), Gaps = 49/363 (13%)
Query: 42 NQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWI 101
+QPYR YHF P KNW+NDPNG++ + G YHLF+QYNP G WGNI W H+ S+DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWE 63
Query: 102 PHDPAIYPSQQSDI--NGCWSGSATILPGEKPAI----------FYTGIDP--------- 140
A+ +SGSA YT P
Sbjct: 64 EKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQ 123
Query: 141 ---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA-PDAMNQINTSSFRDPTTAWLGPDK 196
++Q Q++A D L NP++ P + + +FRDP W +
Sbjct: 124 TVQEDQQSQSIAYSL---DDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQ 180
Query: 197 RWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLD 256
+W V+ I +Y S + W G+WECP +
Sbjct: 181 KWVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS----- 233
Query: 257 TSDMGPNTKHVLKVSLDD-------TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDY 309
G +TK V+ L+ Y VG + D + + D+
Sbjct: 234 ----GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDW 289
Query: 310 GK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK--HLV 366
G +YA+ + + N V GW+N + W AIPR + L G LV
Sbjct: 290 GPDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLV 349
Query: 367 QWP 369
Q P
Sbjct: 350 QQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 239 bits (611), Expect = 3e-77
Identities = 94/329 (28%), Positives = 153/329 (46%), Gaps = 40/329 (12%)
Query: 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD 104
++ YHF P W+NDPNG++ +KG YH+FYQYNP+ WGNI W H+ S DL++W
Sbjct: 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLP 61
Query: 105 PAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVK 164
A+Y + +G +SGSA G K + YT + ++VK
Sbjct: 62 VALY--PDDETHGVFSGSAVEKDG-KMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVK 118
Query: 165 SPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK-GLAILYRSKDFVHW 223
NP+++ + T +FRDP + WR+++GS + K G +LY S D HW
Sbjct: 119 YDGNPVISKPP--EEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLFHW 174
Query: 224 IKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283
K + + + T ECPD + K +L S+ T +++G
Sbjct: 175 -KYEGAIFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMG 218
Query: 284 TYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNE--SSSVND 340
EG + + D+G +YA++TFF +R V+ GW+ + +
Sbjct: 219 EL---------KEGKLNVEKRGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYP 267
Query: 341 DVKKGWAGIQAIPRKLWLDKSGKHLVQWP 369
++GW G+ ++PR+L+++ L P
Sbjct: 268 TKREGWNGVMSLPRELYVE--NNELKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 123 bits (310), Expect = 8e-32
Identities = 48/382 (12%), Positives = 96/382 (25%), Gaps = 88/382 (23%)
Query: 58 INDPNGVMI-YKGIYHLFYQYNPKGAVWGN---IVWAHSTSKDLINWIPHDPAIYPSQQS 113
+ + +G + Y G + +F + + + +W S +
Sbjct: 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKF 116
Query: 114 DINGC--------WSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNL--SDPYLREWV 163
D N WSGSAT K +FYT + Q L + +
Sbjct: 117 DANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNIN 176
Query: 164 KSPKNP---------------LMAPDAMNQINTSSFRDP------TTAWLGPDKRWRVII 202
+ + + + RDP +L +
Sbjct: 177 GVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTED 236
Query: 203 GSKINRK-----------------------------------GLAILYRSKDFVHWIKAK 227
G + L ++ + D+ K
Sbjct: 237 GYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMK 296
Query: 228 HPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTY-- 285
+ S T E + F ++ G L T K+++D + Y
Sbjct: 297 PLIASNTVTDEIERANVFKMN--GKWYLFTD------SRGSKMTIDGITSNDIYMLGYVS 348
Query: 286 STAKDRYVPDEGS-VESDSGLRFDYGKY-YASKTFFDGAKNRRVLWGWVNESSSVNDDVK 343
++ Y P + + L + + Y+ N V+ ++ D +
Sbjct: 349 NSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFYA-DKQ 407
Query: 344 KGWA-----GIQAIPRKLWLDK 360
+A I+ + D
Sbjct: 408 STFAPSFLLNIKGKKTSVVKDS 429
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Score = 38.5 bits (89), Expect = 0.001
Identities = 25/193 (12%), Positives = 49/193 (25%), Gaps = 28/193 (14%)
Query: 53 PPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINW-IPHDPAIYPSQ 111
P + + V+ Y G + ++ SKD INW I + +
Sbjct: 40 PKGARVFNS-AVVPYNGEFVGVFR---IDHKNTRPFLHFGRSKDGINWEIEPEEIQWVDV 95
Query: 112 QSDI---NGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLRE--WVKSP 166
+ + + + F T + + + K+ +V
Sbjct: 96 NGEPFQPSYAYDPRVVKIEDTYYITFCTD---DHGPTIGVGMTKDFKTFVRLPNAYVPFN 152
Query: 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKA 226
+N ++ P +N R + L S D +HW
Sbjct: 153 RNGVLFPRKINGKYVMLNRPSDNGHTPFGDIF---------------LSESPDMIHWGNH 197
Query: 227 KHPLHSVKGTGMW 239
+ L
Sbjct: 198 RFVLGRSSYNWWE 210
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 428 | |||
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 99.93 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.72 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.66 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.51 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.47 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.4 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.37 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 99.28 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.24 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.15 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 97.84 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 97.72 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 97.66 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 97.61 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 97.56 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 97.47 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 97.31 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 96.29 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 91.86 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 91.54 | |
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 85.77 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 85.48 |
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.1e-78 Score=590.75 Aligned_cols=284 Identities=32% Similarity=0.694 Sum_probs=249.7
Q ss_pred CCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEE
Q 014220 45 YRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSAT 124 (428)
Q Consensus 45 ~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav 124 (428)
|||+|||+|+.||||||||++|++|+||||||++|.++.||+++||||+|+|||||+++++||.|+. |..|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsav 79 (294)
T d1uypa2 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAV 79 (294)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSCSCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEEE
T ss_pred CCccCcccCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCcEEEEEEeCCcCCeEECCccccccc--CCCCeEEEEEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999986 57899999998
Q ss_pred EcCCCceEEEEcccCC-----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEE
Q 014220 125 ILPGEKPAIFYTGIDP-----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWR 199 (428)
Q Consensus 125 ~~~dg~~~l~YTg~~~-----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~ 199 (428)
+ .+|++++|||++.. ...+.|++|.|.|+ ++|+|+++|||+..+ +.....+||||+| |. ++|+|+
T Consensus 80 ~-~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~--~~~~~~~fRDP~V-~~-~~g~w~ 149 (294)
T d1uypa2 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKP--PEEGTHAFRDPKV-NR-SNGEWR 149 (294)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSC--SSTTEEEEEEEEE-EE-ETTEEE
T ss_pred e-cCCeEEEEEEEeeCCCCCCcceeeeEEEECCCC-----CceEeecCCceecCC--CccCccccCCCcc-cc-cCCEEE
Confidence 7 59999999998743 24567788888774 799999999999876 5556788999997 45 478999
Q ss_pred EEEeeec-CCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCCee
Q 014220 200 VIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHE 278 (428)
Q Consensus 200 Mv~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~~~~~ 278 (428)
|++|++. ++.|+|++|+|+||++|++.+ ++.......||||||||+|+ + +|||++|.++...+
T Consensus 150 M~~g~~~~~~~G~i~ly~S~Dl~~W~~~g-~l~~~~~~~~~ECPdlf~l~--~-------------~~vl~~s~~~~~~~ 213 (294)
T d1uypa2 150 MVLGSGKDEKIGRVLLYTSDDLFHWKYEG-AIFEDETTKEIECPDLVRIG--E-------------KDILIYSITSTNSV 213 (294)
T ss_dssp EEEEEEETTTEEEEEEEEESSSSSEEEEE-EEEEETTCSCEEEEEEEEET--T-------------EEEEEEEETTTTEE
T ss_pred EEEEeeecCCccEEEEEEcCCccceeEec-cceeCCCCCceeeceEEEeC--C-------------eeEEEEEecCCCCe
Confidence 9999877 567999999999999999987 45555567899999999997 4 99999999988899
Q ss_pred eEEEEEeeCCCCcccCCCCCccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCC--CCCCCCCCcccccccEE
Q 014220 279 YYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV--NDDVKKGWAGIQAIPRK 355 (428)
Q Consensus 279 ~Y~vG~~d~~~~~f~p~~~~~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~--~~~~~~gW~g~lslPR~ 355 (428)
.|.+|++++ ++|+++. .++||+|+ |||+|||.+ ++|||+||||++++.. .++.+.+|+|+||||||
T Consensus 214 ~y~~G~~~~--~~f~~~~-------~~~lD~G~dfYA~qtf~~--~~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRe 282 (294)
T d1uypa2 214 LFSMGELKE--GKLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRE 282 (294)
T ss_dssp EEEEEEEET--TEEEEEE-------EEESCCSSSCEEEEECBS--CSSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEE
T ss_pred eeEeeeecC--CeEEeec-------ceEEccCCceeeccCccC--CCCEEEEEECCCCcccccCCCccCCcccceeeCEE
Confidence 999999986 4887764 47899999 999999987 4899999999998653 44567799999999999
Q ss_pred EEEecCCCeEEecc
Q 014220 356 LWLDKSGKHLVQWP 369 (428)
Q Consensus 356 l~l~~dG~~L~q~P 369 (428)
|+|+ +| +|+|+|
T Consensus 283 l~l~-~~-~L~q~P 294 (294)
T d1uypa2 283 LYVE-NN-ELKVKP 294 (294)
T ss_dssp EEEE-TT-EEEEEE
T ss_pred EEEE-CC-EEEecC
Confidence 9996 57 699998
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=6.7e-77 Score=596.99 Aligned_cols=313 Identities=32% Similarity=0.581 Sum_probs=252.2
Q ss_pred CCCCCCCccccccCCCCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCC-cc-CCC
Q 014220 40 SPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-SD-ING 117 (428)
Q Consensus 40 ~~~~~~Rp~~H~~p~~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-~D-~~g 117 (428)
.++++|||+|||+|+.||||||||++|++|+||||||+||.++.|++++||||+|+|||||+++|+||.|+.. .| ..+
T Consensus 2 ~y~~p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~ 81 (353)
T d1y4wa2 2 NYDQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEM 81 (353)
T ss_dssp CCCCTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBE
T ss_pred CCCCCCcCcEeecCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCeEEEEEEeccccceeECCccccCCccCcCCCCc
Confidence 3679999999999999999999999999999999999999999999999999999999999999999999753 33 468
Q ss_pred eEeeeEEEcCCC----------ceEEEEcccCC------------CCcceEEEEEEcCCCCCccceeEec-CCCceecCC
Q 014220 118 CWSGSATILPGE----------KPAIFYTGIDP------------HNRQVQNLAVPKNLSDPYLREWVKS-PKNPLMAPD 174 (428)
Q Consensus 118 v~SGsav~~~dg----------~~~l~YTg~~~------------~~~~~q~lA~S~D~~d~~l~~w~k~-~~nPvi~~~ 174 (428)
||||||+++.++ .+++||||+.. ...+.|++|+|.|.+ .+|+|+ +.||||..+
T Consensus 82 ~~SGsav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~ 157 (353)
T d1y4wa2 82 YFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNP 157 (353)
T ss_dssp EEEEEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSC
T ss_pred cccCceEecCCCccccccCCCceEEEEEeeeecccccccCcccccCCcEEEEEEEECCCC----cceEEecCCCeEecCC
Confidence 999999986443 46889999742 245789999998864 678776 579999655
Q ss_pred C-CCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCC
Q 014220 175 A-MNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLN 253 (428)
Q Consensus 175 ~-~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~ 253 (428)
. .......+||||+|+|. +++.|+|++++ ..+.|+|++|+|+||.+|++.+.+......++||||||||+|+.++
T Consensus 158 ~~~~~~~~~~fRDP~V~~~-~~~~~~~~~~~-~~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~-- 233 (353)
T d1y4wa2 158 PSPYEAEYQNFRDPFVFWH-DESQKWVVVTS-IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS-- 233 (353)
T ss_dssp CTTCGGGTTSEEEEEEEEE-TTTTEEEEEEE-EGGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT--
T ss_pred CCCCcccccccCCCceEEE-CCCCEEEEEEe-ecCCCeEEEEecCCCCceEEeccccccCCCCcceeeeEEEEeecCC--
Confidence 1 01123468999998776 44444444444 4456899999999999999998654444567899999999997554
Q ss_pred CccccCCCCCceeEEEEeeCC-------CCeeeEEEEEeeCCCCcccCCCCCc--cCCCccccccCC-CcccceEeeCCC
Q 014220 254 GLDTSDMGPNTKHVLKVSLDD-------TKHEYYTVGTYSTAKDRYVPDEGSV--ESDSGLRFDYGK-YYASKTFFDGAK 323 (428)
Q Consensus 254 ~~~~s~~~~~~~~vl~~s~~~-------~~~~~Y~vG~~d~~~~~f~p~~~~~--~~~~~~~lD~G~-fYA~qtf~d~~~ 323 (428)
+.+.+|||+.+... ...+.|++|+||+. +|+|+.+.. .....++||+|+ |||+|||.+..+
T Consensus 234 -------~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~ 304 (353)
T d1y4wa2 234 -------GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSL 304 (353)
T ss_dssp -------SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCG
T ss_pred -------CCceEEEEEecccCCCCcccccccceEEEEEecCc--eeeecCCccccCCCccceeecCcCeeECCceeCCCC
Confidence 23569999887532 24688999999864 787765422 234567899999 999999998767
Q ss_pred CcEEEEEeccCCCCCCCCCCCCCcccccccEEEEEecCC--CeEEecc
Q 014220 324 NRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG--KHLVQWP 369 (428)
Q Consensus 324 gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~dG--~~L~q~P 369 (428)
|||||||||++++...+..+.||+|+|||||||+|+++| .+|+|+|
T Consensus 305 gRri~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 305 NDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp GGCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEecCCCccCCCCCCCCcceeeEeCEEEEEEECCCCCEEEEcC
Confidence 999999999999877777788999999999999998643 3799998
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=2.2e-25 Score=226.66 Aligned_cols=278 Identities=15% Similarity=0.127 Sum_probs=182.0
Q ss_pred ccCCcceEE-ECCEEEEEEeeCCCCCCCC---CcEEEEEEeCCCCCCccCCCCCCCCC--------CccCCCeEeeeEEE
Q 014220 58 INDPNGVMI-YKGIYHLFYQYNPKGAVWG---NIVWAHSTSKDLINWIPHDPAIYPSQ--------QSDINGCWSGSATI 125 (428)
Q Consensus 58 ~nDPng~~~-~~G~YHlFYq~~p~~~~~g---~~~Wgha~S~Dlv~W~~~~~al~P~~--------~~D~~gv~SGsav~ 125 (428)
+.|++|-.. ++|.+++|++..|...... ...+.|+.|+||.+|++.+.++.+.. ..+..+-|||||++
T Consensus 57 l~d~~g~~~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~ 136 (440)
T d1oyga_ 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATF 136 (440)
T ss_dssp EECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred eECCCCCEEEECCEEEEEEEeCCCCCCCCCeEEEEEeecCCCccCCCEECccccCCCccccccccccCCCCccCccceEE
Confidence 677777554 6999999999886433222 23456666889999999998775542 23445779999998
Q ss_pred cCCCceEEEEcccCCC--CcceEEEE---EEcCCCCCccceeEecCCCceecCCCCCC---------------CCCCCcc
Q 014220 126 LPGEKPAIFYTGIDPH--NRQVQNLA---VPKNLSDPYLREWVKSPKNPLMAPDAMNQ---------------INTSSFR 185 (428)
Q Consensus 126 ~~dg~~~l~YTg~~~~--~~~~q~lA---~S~D~~d~~l~~w~k~~~nPvi~~~~~~~---------------~~~~~~R 185 (428)
..||+++|||||+... ..+++..| ++.| +....|++...+++|..++... .+..+||
T Consensus 137 ~~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d---~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fR 213 (440)
T d1oyga_ 137 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSAS---DSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLR 213 (440)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEEC---SSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCE
T ss_pred ccCCeEEEEEEeccCCCCCcceEEEEEEEEeec---CCcceeecccCCceeecCCCccceeeecccccCCCCCCCccccc
Confidence 8899999999997532 22322222 1122 1236777765555553331111 1345899
Q ss_pred CCeEEEECCCCeEEEEEeeecCC------------------------------------------ccEEEE-EEeCCCCC
Q 014220 186 DPTTAWLGPDKRWRVIIGSKINR------------------------------------------KGLAIL-YRSKDFVH 222 (428)
Q Consensus 186 DP~V~~~~~~g~y~Mv~ga~~~~------------------------------------------~G~i~l-y~S~Dl~~ 222 (428)
||+|+ . .+|+|||++++.... .|.|.+ +.|+|+.+
T Consensus 214 DP~v~-~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~~ 291 (440)
T d1oyga_ 214 DPHYV-E-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTL 291 (440)
T ss_dssp EEEEE-E-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSSE
T ss_pred CCcee-e-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCccc
Confidence 99964 5 379999999875410 245554 45999999
Q ss_pred cEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC-------CCCe----eeEEEEEeeCCCCc
Q 014220 223 WIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD-------DTKH----EYYTVGTYSTAKDR 291 (428)
Q Consensus 223 W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~-------~~~~----~~Y~vG~~d~~~~~ 291 (428)
|+..+.++.......+||||++|+++ | ||+|+.|.. .... .+++|| |.-.+.
T Consensus 292 We~~~pLl~a~~v~d~~ErP~I~~~n--G-------------KYYLFtss~~~~~a~~~~~~~~~~~~g~Vs--dsl~Gp 354 (440)
T d1oyga_ 292 KKVMKPLIASNTVTDEIERANVFKMN--G-------------KWYLFTDSRGSKMTIDGITSNDIYMLGYVS--NSLTGP 354 (440)
T ss_dssp EEEEEEEEECTTTCSCCEEEEEEEET--T-------------EEEEEEEEEGGGCCCTTCCTTCEEEEEEEE--SSTTCC
T ss_pred ceecCcceeccCCCCeEECCEEEEEC--C-------------EEEEEEecccccccCCCcCCCCceEEEEEC--CCCCCC
Confidence 99987544444567799999999998 6 888887642 1111 224455 444567
Q ss_pred ccCCCCC-ccCCCccccccCC-CcccceEeeCCCCcEEEEEeccCCCCCCCCCCCCCcccccccEEEEEecCC
Q 014220 292 YVPDEGS-VESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSG 362 (428)
Q Consensus 292 f~p~~~~-~~~~~~~~lD~G~-fYA~qtf~d~~~gr~il~gW~~~~~~~~~~~~~gW~g~lslPR~l~l~~dG 362 (428)
|+|.... .........|++. .|+..++.+....++++.+||.++... .+..|.++-+.+|.|+.+.
T Consensus 355 y~PlN~sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~~~-----~~~g~t~APt~~l~l~g~~ 422 (440)
T d1oyga_ 355 YKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGFY-----ADKQSTFAPSFLLNIKGKK 422 (440)
T ss_dssp CEEGGGTSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTTSC-----SSCCCEECBCEEEEEETTE
T ss_pred CeecCCCcceeccCCCCCcCcccceeEEecCCCCceEEEEEeecCcCcc-----cccCCccCCcEEEEEcCCc
Confidence 7776421 1111122457788 599999987655688999999999632 2345777888888988554
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.72 E-value=8.1e-17 Score=157.55 Aligned_cols=185 Identities=16% Similarity=0.193 Sum_probs=128.3
Q ss_pred CcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCC-CCCCCCC---CccCCCeEeeeEEEcCCCceEEEEc
Q 014220 61 PNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYPSQ---QSDINGCWSGSATILPGEKPAIFYT 136 (428)
Q Consensus 61 Png~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~-~al~P~~---~~D~~gv~SGsav~~~dg~~~l~YT 136 (428)
| |+++++|+|||+|+..- ..+.+++|+|+|+|++||+..+ +++.|+. .++..||++++++.. +|+++|+||
T Consensus 48 p-~~i~~~g~~~ll~r~~~---~~~~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~~-~d~yym~yt 122 (327)
T d1vkda_ 48 S-AVVPYNGEFVGVFRIDH---KNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVKI-EDTYYITFC 122 (327)
T ss_dssp E-EEEEETTEEEEEEEEEE---TTSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEEE-TTEEEEEEE
T ss_pred c-EEEEECCEEEEEEEecC---CCCceEEEEEEcCCccCCEeCCCCeecCCCCCcccccCcEEcceEEEE-CCEEEEEEE
Confidence 5 78999999999999753 3457899999999999998664 5677763 356789999999874 899999999
Q ss_pred ccCCCCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec---CCccEEE
Q 014220 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI---NRKGLAI 213 (428)
Q Consensus 137 g~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~---~~~G~i~ 213 (428)
+.. ....+++|+|.|. ++|+|.. +++.+ .-+|+.++....+|+|+|+.-... ...|.|.
T Consensus 123 ~~~--~~~~i~lA~S~D~-----~~w~k~g--~~~~~---------~~kd~~lfpeki~Gky~ml~Rp~~~~~~~~~~I~ 184 (327)
T d1vkda_ 123 TDD--HGPTIGVGMTKDF-----KTFVRLP--NAYVP---------FNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIF 184 (327)
T ss_dssp EES--SSEEEEEEEESSS-----SSEEEEC--CSSSS---------SEEEEEECSSCBTTBEEEEEEECCSSSCSCCCEE
T ss_pred ecC--CCcEEEEEEecCc-----chheecC--CccCc---------cccCceEeeeeccCeEEEEEeeccCCCcccceEE
Confidence 864 4567899999884 8999973 33322 236886432334789999964332 2356799
Q ss_pred EEEeCCCCCcEEcccccccCCCCCeee------cCceEEeccCCCCCccccCCCCCceeEEEEeeCC--CCeeeEEEEE
Q 014220 214 LYRSKDFVHWIKAKHPLHSVKGTGMWE------CPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD--TKHEYYTVGT 284 (428)
Q Consensus 214 ly~S~Dl~~W~~~~~~l~~~~~~~~wE------CPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~--~~~~~Y~vG~ 284 (428)
+.+|+||.+|+....++.. ...+.|| +|.-++.+ ..|++++..-. .....|.+|-
T Consensus 185 la~S~Dl~~W~~~~~v~~~-~~~~~wd~~~vG~gpppI~t~---------------~Gwl~iYHgv~~~~~~~~Y~~g~ 247 (327)
T d1vkda_ 185 LSESPDMIHWGNHRFVLGR-SSYNWWENLKIGAGPYPIETS---------------EGWLLIYHGVTLTCNGYVYSFGA 247 (327)
T ss_dssp EEEESSSSCBEEEEEEECC-CSSCGGGSSEEEECSCCEEET---------------TEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEcCCCcccccccceeccc-CCCCceeeeeecCCCCcEEcc---------------CcEEEEEEeccccCCCcEEEEEE
Confidence 9999999999976533332 2333444 34444443 25777654211 2234588887
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.66 E-value=2.2e-15 Score=144.22 Aligned_cols=180 Identities=17% Similarity=0.148 Sum_probs=121.5
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCc-------cCCCeEeeeEEEcCCCc
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS-------DINGCWSGSATILPGEK 130 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~-------D~~gv~SGsav~~~dg~ 130 (428)
++||+ +++++|+||||...... ...+.+++|+||+||+..+.++.+...+ ...++|.++++. .+|+
T Consensus 10 ihDP~-vi~~~g~YY~~~t~~~~-----~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 82 (291)
T d1uv4a1 10 LHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNGK 82 (291)
T ss_dssp CSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETTE
T ss_pred ccCCE-EEEECCEEEEEEecCCC-----CCcEEEEECCCCCCCEECcccccCCcccccccCCccCCcccceEEEE-ECCE
Confidence 56997 89999999999864322 2358889999999999988776554321 135799999876 5999
Q ss_pred eEEEEcccCCC-CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCc
Q 014220 131 PAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (428)
Q Consensus 131 ~~l~YTg~~~~-~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~ 209 (428)
++|||++.... ....+++|+|++.. .-.|+.. ++++... .. .....+||.|++ +++|++||+++... .
T Consensus 83 yylyy~~~~~~~~~~~i~~a~s~~~~---~Gpw~~~--~~~~~~~--~~-~~~~~iDp~vf~-D~dG~~Y~~~~~~~--~ 151 (291)
T d1uv4a1 83 YWLYYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRST--SS-NNYNAIDPELTF-DKDGNPWLAFGSFW--S 151 (291)
T ss_dssp EEEEEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEEC--TT-SSSCCCSCEEEE-CTTSCEEEEECBST--T
T ss_pred EEEEEEecCCCCCcceEEEEEeCCCC---CCCCCcC--ccccccc--cC-CCCCccCceEEE-ecCCcEEEEecccC--C
Confidence 99999987643 45667899987631 1357763 2343222 11 234568999765 47899999997543 2
Q ss_pred cEEEEEEe-CCCCCcEEcccc--cc-cCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 210 GLAILYRS-KDFVHWIKAKHP--LH-SVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 210 G~i~ly~S-~Dl~~W~~~~~~--l~-~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
.|.+++. .|. +...+++ +. ........|||.+|+.+ | +++|++|..
T Consensus 152 -~i~i~~l~~~~--~~~~g~~~~i~~~~~~~~~~EgP~i~k~~--g-------------~Yyl~~S~~ 201 (291)
T d1uv4a1 152 -GIKLTKLDKST--MKPTGSLYSIAARPNNGGALEAPTLTYQN--G-------------YYYLMVSFD 201 (291)
T ss_dssp -CEEEEEECTTT--CSEEEEEEEEECCTTTTTCEEEEEEEEET--T-------------EEEEEEEEE
T ss_pred -ceEEEeecccc--ccCcCceeEEEecCCCCccccccEEEEEC--C-------------EEEEEEecC
Confidence 2445543 443 3322322 21 22345689999999997 5 888888864
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.51 E-value=2e-13 Score=130.71 Aligned_cols=182 Identities=18% Similarity=0.149 Sum_probs=117.9
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCC-------ccCCCeEeeeEEEcCCCc
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEK 130 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~D~~gv~SGsav~~~dg~ 130 (428)
+.||+ +++++|+||||... ..+..++|+||+||+.++.+|.+... ....++|+++++. .+|+
T Consensus 7 ~~DP~-v~~~~g~yYl~~t~---------~gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 75 (318)
T d1gyha_ 7 VHDPV-MTREGDTWYLFSTG---------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKGL 75 (318)
T ss_dssp CSSCE-EEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETTE
T ss_pred CCCCE-EEEECCEEEEEEee---------CCEEEEECCCCCCCeECCccccCCccccccCCCcCCCceECCEEEE-EcCc
Confidence 57997 78899999998642 13567799999999999888765432 2235799999886 5899
Q ss_pred eEEEEcccCCC-CcceEEEEEEcCCC-CCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCC
Q 014220 131 PAIFYTGIDPH-NRQVQNLAVPKNLS-DPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (428)
Q Consensus 131 ~~l~YTg~~~~-~~~~q~lA~S~D~~-d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~ 208 (428)
++|||++.... ....+++|++.... +.....|++. ..+.... +......++||.|+ .+++|++||++++...
T Consensus 76 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~iDp~v~-~d~dG~~Yl~~~~~~~- 149 (318)
T d1gyha_ 76 FYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESV--PQRDLWNAIAPAII-ADDHGQVWMSFGSFWG- 149 (318)
T ss_dssp EEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEEC--TTTCSSCCCCCEEE-ECTTSCEEEEECBSTT-
T ss_pred eEEEEEEecCCCcccceeEEEEeccCCCccccccccC--ceecccC--CCCCCCceEccceE-eecCCcEEEeccCCCC-
Confidence 99999987643 45566777775421 1112567763 2333333 23345678999965 4578999999986532
Q ss_pred ccEEEEEEe-CCCC------CcEEccc----ccccC--CCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 209 KGLAILYRS-KDFV------HWIKAKH----PLHSV--KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 209 ~G~i~ly~S-~Dl~------~W~~~~~----~l~~~--~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
.+.+.+. .|+. .|..... ++... ....++|||.+|+.+ | +++|++|..
T Consensus 150 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~yS~~ 210 (318)
T d1gyha_ 150 --GLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG--D-------------YYYLFASWG 210 (318)
T ss_dssp --CEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred --CeeeEecCccceeeccccccccccccccceeeccCCCCCceeecCEEEEEC--C-------------EEEEEEecC
Confidence 1233332 3322 2322211 11111 134589999999998 4 888888864
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.47 E-value=5e-13 Score=128.31 Aligned_cols=182 Identities=18% Similarity=0.193 Sum_probs=118.8
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC--------CccCCCeEeeeEEEcC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ--------QSDINGCWSGSATILP 127 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~--------~~D~~gv~SGsav~~~ 127 (428)
-|..||+ +++++|+|+||... .++..++|+||+||+..+.+|.... ..+..++|++.++. .
T Consensus 22 ~~~~DP~-i~~~~g~yY~~~t~---------~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~-~ 90 (312)
T d1wl7a1 22 LWAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICF-Y 90 (312)
T ss_dssp CBCSSCE-EEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-E
T ss_pred cCcCCCE-EEEECCEEEEEEec---------CCceEEEcCCCCCceECcccccCCcccccccCCcccCCceEcceEEE-e
Confidence 3778996 78899999998532 2467899999999999988876432 23567899999987 5
Q ss_pred CCceEEEEcccCCC-CcceEEEEEEcC--CCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEee
Q 014220 128 GEKPAIFYTGIDPH-NRQVQNLAVPKN--LSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 128 dg~~~l~YTg~~~~-~~~~q~lA~S~D--~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
+|+++||||+.... ....+++|.+.. ..++ ...|++. .|++... . ......+||.++ .+++|++||+.+.
T Consensus 91 ~g~yyl~~t~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~--~~~~~~~--~-~~~~~~iD~~~f-~d~dG~~y~~~~~ 163 (312)
T d1wl7a1 91 NGIYYLYYSVSTFGKNTSVIGLATNRTLDPRDP-DYEWKDM--GPVIHST--A-SDNYNAIDPNVV-FDQEGQPWLSFGS 163 (312)
T ss_dssp TTEEEEEEEECCTTCCCEEEEEEEESCSCTTST-TCCCEEE--EEEEEEC--T-TSSSCCCSCEEE-ECTTSCEEEEECB
T ss_pred CCEEEEEEEeecCCcccceeeEEEEecccCCCC-ccccccc--cceecCC--C-CCCCCcCCCcee-EccCCcEEEeecC
Confidence 89999999987643 344556665532 1122 2455553 3554332 1 234578999965 5578999999876
Q ss_pred ecCCccEEEEEE-eCCCCCcEEccccccc---CCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 205 KINRKGLAILYR-SKDFVHWIKAKHPLHS---VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 205 ~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~---~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
... .+.+++ +.|..........+.. .......|+|.+|+.+ | +++|++|..
T Consensus 164 ~~~---~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~--g-------------~yYl~ys~~ 218 (312)
T d1wl7a1 164 FWS---GIQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRN--G-------------YYYLFVSFD 218 (312)
T ss_dssp STT---CEEEEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEET--T-------------EEEEEEEES
T ss_pred CCC---ceeEEEEcCcCCcCcCCceEEEecccCCCCCcccccEEEEEC--C-------------cEEEEEecC
Confidence 432 344444 3343322211122221 1234578999999987 4 888888864
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.40 E-value=2.6e-11 Score=116.52 Aligned_cols=179 Identities=17% Similarity=0.148 Sum_probs=112.6
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC------CccCCCeEeeeEEEcCC
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ------QSDINGCWSGSATILPG 128 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~------~~D~~gv~SGsav~~~d 128 (428)
.|+..||. +++++|+||||+..... ...+..++|+||+||+.++.+|.... ......+|.+.++. .+
T Consensus 8 ~~~~aDP~-vi~~~~~yY~~~tt~~~-----~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 80 (317)
T d1yrza2 8 PGFHPDPS-IVRVGDDYYIATSTFEW-----FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HD 80 (317)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ET
T ss_pred CCCCCCCE-EEEECCEEEEEEccCCC-----CCCeEEEECCCCCCCeECCccccCccccccCCCcccceeecceEEE-EC
Confidence 35678996 78899999999863321 11355679999999999887775443 23345689998876 59
Q ss_pred CceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEee
Q 014220 129 EKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (428)
Q Consensus 129 g~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga 204 (428)
|+++|||++.... ....+.+|.+++.. ..|+. |+.. .....||.++ .+++|+.||+.+.
T Consensus 81 G~~ylyy~~~~~~~~~~~~~~~~~~~a~~p~----gp~~~----~~~~--------~~~~iDp~~f-~D~dG~~Yl~~~~ 143 (317)
T d1yrza2 81 GTFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL--------NSSGFDPSLF-HDDDGRKWLVNMI 143 (317)
T ss_dssp TEEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC--------CCSCSCCEEE-ECTTSCEEEEEEE
T ss_pred CEEEEEEEEeccCCCCcccceEEEEecCCCC----CCccc----eeee--------cCCccCCcEE-EecCCCEEEEEec
Confidence 9999999875421 23344566665542 23432 2221 1235799964 5578999999876
Q ss_pred ecCC-----ccEEEEEE-eCCCCCcEEcccc--cccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 205 KINR-----KGLAILYR-SKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 205 ~~~~-----~G~i~ly~-S~Dl~~W~~~~~~--l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
.... ...+.+.. +.+ .++..+.+ +.........|.|.+++.+ | +++|++|...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~yyl~~s~~~ 204 (317)
T d1yrza2 144 WDYRKGNHPFAGIILQEYSEA--EQKLVGPVKNIYKGTDIQLTEGPHLYKKD--G-------------YYYLLVAEGG 204 (317)
T ss_dssp ECCCTTSCSEEEEEEEEEETT--TTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred cCcCCCCccccceeeeecCcc--cCeEcCCceEEEeccCCCcccCceEEEEC--C-------------EEEEEEccCC
Confidence 5421 11233332 333 34443332 2222344578999999987 5 7888888654
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.37 E-value=8.7e-11 Score=112.68 Aligned_cols=179 Identities=13% Similarity=0.058 Sum_probs=115.2
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC------CccCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ------QSDINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~------~~D~~gv~SGsav~~~dg 129 (428)
|...||. +++++|+|+||+...... ..+..++|+||+||+.++.+|.... ..+..++|.+.++. .+|
T Consensus 8 ~~~aDP~-v~~~~~~yY~~~tt~~~~-----~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 80 (321)
T d1y7ba2 8 GFNPDPS-ICRADTDYYIATSTFEWF-----PGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSY-HDG 80 (321)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEecCCCC-----CCeEEEECCCccCCEEccccccCCcccccCCCcccCcccCceEEE-ECC
Confidence 4568996 788999999998643321 1355679999999999887764332 23456799999876 599
Q ss_pred ceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeee
Q 014220 130 KPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (428)
Q Consensus 130 ~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~ 205 (428)
+++|+|++.... ..+.+.+|++++.. ..|+.. ..+ .....||.++ .+++|+.+|+++..
T Consensus 81 ~yylyys~~~~~~~~~~~~~~~~a~a~~p~----Gp~~~~---~~~---------~~~~~D~~~~-~d~dg~~~~~~~~~ 143 (321)
T d1y7ba2 81 KFWLIYTDVKVTDGMWKDCHNYLTTCESVD----GVWSDP---ITL---------NGSGFDASLF-HDNDGKKYLVNMYW 143 (321)
T ss_dssp EEEEEEEEESCCSSSCCCEEEEEEEESSTT----SCCCCC---EEC---------CCSCSCCEEE-ECTTSCEEEEEEEE
T ss_pred EEEEEEEeeccCCCCccceeeEeeecCCCC----CCcccc---eee---------cccccCCcEE-EEcCCCEEEEEecc
Confidence 999999986532 24556778877653 234321 111 1235799864 55788999988755
Q ss_pred cC-----CccEEE-EEEeCCCCCcEEcccccccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 014220 206 IN-----RKGLAI-LYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (428)
Q Consensus 206 ~~-----~~G~i~-ly~S~Dl~~W~~~~~~l~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~ 273 (428)
.. ....+. ...+.|..+.......+.........|.|.+|+-+ | +++|++|..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~yyl~~s~~ 202 (321)
T d1y7ba2 144 DQRTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIG--D-------------YYYLFTAEG 202 (321)
T ss_dssp CCCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEES
T ss_pred CCCccccCccceeeEeeCCCcceEcCCceEEeeccCCCccccceEEEEC--C-------------EEEEEEcCC
Confidence 32 122333 33456665554322223333334567999999976 4 777777754
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=99.28 E-value=1.1e-09 Score=105.34 Aligned_cols=179 Identities=17% Similarity=0.140 Sum_probs=113.5
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCC------CccCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ------QSDINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~------~~D~~gv~SGsav~~~dg 129 (428)
|+..||. +++++|+||||+.... ....+..++|+||+||+.++.+|.... ..+..++|.+.+.. .+|
T Consensus 9 ~~~aDP~-v~~~~~~yY~~~tt~~-----~~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~~-~~G 81 (322)
T d2exha2 9 GFHPDPS-ICRVGDDYYIAVSTFE-----WFPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDG 81 (322)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT-----EESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEcCCC-----CCCCcEEEECCCcCCcEEcccccccccccccCCCcccCCcccceEEE-ECC
Confidence 6678996 7889999999986321 112355689999999998877664322 23456899999876 599
Q ss_pred ceEEEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeee
Q 014220 130 KPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (428)
Q Consensus 130 ~~~l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~ 205 (428)
+++|||++.... ......++.+++.. ..|++ |+... ....||.++ .+++|+.||+.+..
T Consensus 82 ~yylyys~~~~~~~~~~~~~~~~~~sd~~~----gp~~~----~~~~~--------~~~~dp~~f-~d~dG~~Yl~~~~~ 144 (322)
T d2exha2 82 KFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN--------SSGFDPSLF-HDEDGRKYLVNMYW 144 (322)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC--------CSCSCCEEE-ECTTSCEEEEEEEE
T ss_pred EEEEEEEeecccCCCccccceEEEecCCCC----CCccc----ceEec--------CCCCCCCeE-EEcCCCEEEEeccc
Confidence 999999976432 22334466665432 23432 33211 234699865 55789999998765
Q ss_pred cCC---c--cEEEEEEeCCCCCcEEccccc--ccCCCCCeeecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 014220 206 INR---K--GLAILYRSKDFVHWIKAKHPL--HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (428)
Q Consensus 206 ~~~---~--G~i~ly~S~Dl~~W~~~~~~l--~~~~~~~~wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~~~ 274 (428)
... . ..+.+. ..+...++..+++. .........|.|.+++.+ | +++|++|...
T Consensus 145 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~s~~~ 204 (322)
T d2exha2 145 DHRVDHHPFYGIVLQ-EYSVEQKKLVGEPKIIFKGTDLRITEGPHLYKIN--G-------------YYYLLTAEGG 204 (322)
T ss_dssp CCCTTSCSEEEEEEE-EEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET--T-------------EEEEEEEESC
T ss_pred CCccCcCCccceEEe-eecCcCCeECCCcEEEEEecCCCcccCcEEEEEC--C-------------EEEEEEeCCC
Confidence 421 1 122222 23334566555432 223344578999999987 5 7888887653
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.24 E-value=3e-11 Score=117.34 Aligned_cols=124 Identities=11% Similarity=0.129 Sum_probs=94.1
Q ss_pred eCCCCCCccC-CCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCCCCcceEEEEEEcCCCCCccceeEecCCCceec
Q 014220 94 SKDLINWIPH-DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA 172 (428)
Q Consensus 94 S~Dlv~W~~~-~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~ 172 (428)
|++++ |++. .++|.|...+...+||.++|+. .+|+++|+|.+.+.++...+++|+|.|+ +||+|.+ .|++.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~-~~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCc-eecCCCccccCCCCcchhceeccEEEE-ECCEEEEEEEecCCCCceEEEEEEcCCc-----cCCEeCC-CCeec
Confidence 44443 4433 2668887666678899999887 5999999999877677888999999986 7999975 57774
Q ss_pred CC-CCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEccc
Q 014220 173 PD-AMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKH 228 (428)
Q Consensus 173 ~~-~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~ 228 (428)
+. ..+.++...++||.|+.. +++|||++.+.. +..++.+++|+|+++|++.+.
T Consensus 93 p~~~~~~~~~~gv~DPrv~~~--~d~yym~yt~~~-~~~~i~lA~S~D~~~w~k~g~ 146 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVKI--EDTYYITFCTDD-HGPTIGVGMTKDFKTFVRLPN 146 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEEE--TTEEEEEEEEES-SSEEEEEEEESSSSSEEEECC
T ss_pred CCCCCcccccCcEEcceEEEE--CCEEEEEEEecC-CCcEEEEEEecCcchheecCC
Confidence 43 112245567899998765 678999998764 345789999999999998764
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.15 E-value=1.7e-05 Score=74.07 Aligned_cols=146 Identities=16% Similarity=0.213 Sum_probs=87.4
Q ss_pred CcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCC--CccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEccc
Q 014220 61 PNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLIN--WIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGI 138 (428)
Q Consensus 61 Png~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~--W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~ 138 (428)
|. +++++|+|||||.....+. +....++|+|+|... |++.+..+.+.... ......++++.++||+.+|+|...
T Consensus 74 P~-v~~~~g~yylyy~~~~~~~--~~~~i~~a~s~~~~~Gpw~~~~~~~~~~~~~-~~~~iDp~vf~D~dG~~Y~~~~~~ 149 (291)
T d1uv4a1 74 PD-IQYYNGKYWLYYSVSSFGS--NTSAIGLASSTSISSGGWKDEGLVIRSTSSN-NYNAIDPELTFDKDGNPWLAFGSF 149 (291)
T ss_dssp EE-EEEETTEEEEEEEECCTTC--SCEEEEEEEESCTTTTCCEEEEEEEEECTTS-SSCCCSCEEEECTTSCEEEEECBS
T ss_pred eE-EEEECCEEEEEEEecCCCC--CcceEEEEEeCCCCCCCCCcCccccccccCC-CCCccCceEEEecCCcEEEEeccc
Confidence 53 7889999999998765432 356789999999765 98765433322221 223446888888889999999654
Q ss_pred CCCCcceEEEEE-EcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC----C-ccEE
Q 014220 139 DPHNRQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN----R-KGLA 212 (428)
Q Consensus 139 ~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~----~-~G~i 212 (428)
.. .+.++. +.+. ...... ...+...+ . ....+.-|.++ + .+|+|||++++..- . .=++
T Consensus 150 ~~----~i~i~~l~~~~-----~~~~g~-~~~i~~~~--~--~~~~~EgP~i~-k-~~g~Yyl~~S~~~~~~~~~~~y~v 213 (291)
T d1uv4a1 150 WS----GIKLTKLDKST-----MKPTGS-LYSIAARP--N--NGGALEAPTLT-Y-QNGYYYLMVSFDKCCDGVNSTYKI 213 (291)
T ss_dssp TT----CEEEEEECTTT-----CSEEEE-EEEEECCT--T--TTTCEEEEEEE-E-ETTEEEEEEEEECSSSSSCCEEEE
T ss_pred CC----ceEEEeecccc-----ccCcCc-eeEEEecC--C--CCccccccEEE-E-ECCEEEEEEecCcccCCCCCCcee
Confidence 31 133332 2221 111111 11222222 1 12334678864 4 48999999987541 1 1257
Q ss_pred EEEEeCCCCC-cEEc
Q 014220 213 ILYRSKDFVH-WIKA 226 (428)
Q Consensus 213 ~ly~S~Dl~~-W~~~ 226 (428)
.+++|+++.. |+..
T Consensus 214 ~~~~s~~~~GP~~~~ 228 (291)
T d1uv4a1 214 AYGRSKSITGPYLDK 228 (291)
T ss_dssp EEEEESSTTCCCBCT
T ss_pred EEEEcCCCCCCCccC
Confidence 7899998875 7643
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=97.84 E-value=8.2e-05 Score=69.97 Aligned_cols=79 Identities=18% Similarity=0.225 Sum_probs=52.7
Q ss_pred CCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeCCCCCcEEcccccccCC--------CCCe
Q 014220 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVK--------GTGM 238 (428)
Q Consensus 167 ~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------~~~~ 238 (428)
+||||.. .+.||.|+.. ++.|||+..+.. ....+.+++|+||+||+..+..+.... ....
T Consensus 3 ~NPv~~~---------~~aDP~vi~~--~~~yY~~~tt~~-~~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~ 70 (317)
T d1yrza2 3 QNPILPG---------FHPDPSIVRV--GDDYYIATSTFE-WFPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGG 70 (317)
T ss_dssp ESCSBCS---------SCCSCEEEEE--TTEEEEEECCBT-EESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCE
T ss_pred cCCCCCC---------CCCCCEEEEE--CCEEEEEEccCC-CCCCeEEEECCCCCCCeECCccccCccccccCCCcccce
Confidence 4888832 3679998754 678998765322 222367899999999998876543221 1234
Q ss_pred eecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 014220 239 WECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (428)
Q Consensus 239 wECPdlf~l~~~g~~~~~~s~~~~~~~~vl~~s~ 272 (428)
.-.|++...+ | +|+|.++.
T Consensus 71 ~WAP~v~~~~--G-------------~~ylyy~~ 89 (317)
T d1yrza2 71 IWAPCLSYHD--G-------------TFYLIYTD 89 (317)
T ss_dssp ECSCEEEEET--T-------------EEEEEEEE
T ss_pred eecceEEEEC--C-------------EEEEEEEE
Confidence 5579999887 5 67777664
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.72 E-value=0.00029 Score=66.00 Aligned_cols=126 Identities=10% Similarity=0.086 Sum_probs=82.3
Q ss_pred EEECCEEEEEEeeCCC--CCCCCCcEEEEEEeCCCCCCccC--CCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccCC
Q 014220 65 MIYKGIYHLFYQYNPK--GAVWGNIVWAHSTSKDLINWIPH--DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDP 140 (428)
Q Consensus 65 ~~~~G~YHlFYq~~p~--~~~~g~~~Wgha~S~Dlv~W~~~--~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~~ 140 (428)
+..+|++++||...-. ..........+|+|+|+.+|+.. .++|.+.......+.-.+.|.. ++|+++|+..+...
T Consensus 79 v~~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg~~w~k~~~npvi~~~~~~~~~~fRDP~V~~-~~g~w~M~~g~~~~ 157 (294)
T d1uypa2 79 VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNR-SNGEWRMVLGSGKD 157 (294)
T ss_dssp EEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSSTTEEEEEEEEEEE-ETTEEEEEEEEEET
T ss_pred EecCCeEEEEEEEeeCCCCCCcceeeeEEEECCCCCceEeecCCceecCCCccCccccCCCcccc-cCCEEEEEEEeeec
Confidence 4579999999986422 22222456788999999999875 3555544332334456677765 58999998876554
Q ss_pred CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeee
Q 014220 141 HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (428)
Q Consensus 141 ~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~ 205 (428)
+..-...+..|+| |++|+.. .++...+ . ...+.=|-+ +. -+++|+|+++..
T Consensus 158 ~~~G~i~ly~S~D-----l~~W~~~--g~l~~~~--~---~~~~ECPdl-f~-l~~~~vl~~s~~ 208 (294)
T d1uypa2 158 EKIGRVLLYTSDD-----LFHWKYE--GAIFEDE--T---TKEIECPDL-VR-IGEKDILIYSIT 208 (294)
T ss_dssp TTEEEEEEEEESS-----SSSEEEE--EEEEEET--T---CSCEEEEEE-EE-ETTEEEEEEEET
T ss_pred CCccEEEEEEcCC-----ccceeEe--ccceeCC--C---CCceeeceE-EE-eCCeeEEEEEec
Confidence 4445566777876 5899874 4666543 1 123455663 44 478999998764
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=97.66 E-value=9.5e-05 Score=69.46 Aligned_cols=140 Identities=9% Similarity=-0.028 Sum_probs=94.4
Q ss_pred CCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEcccC
Q 014220 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGID 139 (428)
Q Consensus 60 DPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l~YTg~~ 139 (428)
+|..++.++|++||+++-..+. .|...+.+.+.+++..+|+..+. | ..|+-.+.+... +|++++-||...
T Consensus 31 N~~apf~~~Gk~~l~~RvE~rd-~~s~s~v~lf~~~g~~~f~~~~~---p-----~~glEDPrvt~i-~g~lv~~~t~~~ 100 (310)
T d2b4wa1 31 NCSVPFSYKGKTHIYGRVEKRD-IWAASHVRLFEETGKDEFTAVPE---L-----SWELEDPYIAKI-NNEMIFGGTRVR 100 (310)
T ss_dssp SCCCCEEETTEEEEEEEEECTT-CSSCCEEEEEEEEETTEEEECTT---C-----CBSCEEEEEEEE-TTEEEEEEEEEC
T ss_pred cCCcEEEECCEEEEEEEEEccC-cceEEEEEEEEecCCcceEECCc---c-----cccCCCCCEEeE-CCEEEEEEEEec
Confidence 4666788999999999988654 35567788889999999986542 1 136677888774 899999999876
Q ss_pred CCCcceEEEEEEcCCCCCccceeEecCCCceec-CCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecCCccEEEEEEeC
Q 014220 140 PHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA-PDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSK 218 (428)
Q Consensus 140 ~~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~-~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~~~G~i~ly~S~ 218 (428)
+. .....+|.+.+ +++|.+. .|++. .| + ..+|-.+ ..-.+|+|.|+.--+..+.|.|.+..++
T Consensus 101 ~~-~~~~~~~~t~~-----~r~~~~~--l~~f~~gp--~-----~~Kdi~L-~e~~dGKy~~ftRP~~g~~g~Ig~~~~d 164 (310)
T d2b4wa1 101 KN-GNAILSYYGYF-----YRGTPDE--LTYFTRGP--G-----CMKDIRV-LQLQDGRLGVFSRPRVGRKASIGFVILN 164 (310)
T ss_dssp ------CCCEEEEE-----EEEETTE--EEEEEECC--T-----TCCCCEE-EECTTSCEEEEECCCC---CCEEEEEES
T ss_pred CC-CCcceEEEeee-----eecchhc--CceeecCC--C-----ccccEEe-EEeeCCEEEEEEccccCCCCeeEEEEeC
Confidence 43 23334565554 3566542 35553 33 2 2356653 3447899999986655557789999999
Q ss_pred CCCCcEE
Q 014220 219 DFVHWIK 225 (428)
Q Consensus 219 Dl~~W~~ 225 (428)
||.+|+.
T Consensus 165 ~l~~~t~ 171 (310)
T d2b4wa1 165 SIDELGA 171 (310)
T ss_dssp CGGGCSH
T ss_pred ChhhCCH
Confidence 9999974
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=97.61 E-value=0.00063 Score=63.88 Aligned_cols=153 Identities=9% Similarity=0.028 Sum_probs=84.1
Q ss_pred CCCCccCCcceEEECCEEEEEEeeCCCCC-CCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 014220 54 PKNWINDPNGVMIYKGIYHLFYQYNPKGA-VWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (428)
Q Consensus 54 ~~gw~nDPng~~~~~G~YHlFYq~~p~~~-~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~ 131 (428)
..+.+.-|. +.+++|+|||||....... .+....-..++|++.. .|++.. .+.. . ....++++++||+.
T Consensus 67 ~~~~~WAPe-v~~~~G~yylyys~~~~~~~~~~~~~~~~~~sd~~~gp~~~~~-~~~~-~------~~dp~~f~d~dG~~ 137 (322)
T d2exha2 67 DSGGVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSDPI-YLNS-S------GFDPSLFHDEDGRK 137 (322)
T ss_dssp TTCBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCCCE-ECCC-S------CSCCEEEECTTSCE
T ss_pred ccCCcccce-EEEECCEEEEEEEeecccCCCccccceEEEecCCCCCCcccce-EecC-C------CCCCCeEEEcCCCE
Confidence 345677885 8899999999998654332 2223344556666543 565432 1211 1 13466777789999
Q ss_pred EEEEcccCCC--CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-CC
Q 014220 132 AIFYTGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NR 208 (428)
Q Consensus 132 ~l~YTg~~~~--~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-~~ 208 (428)
+|+|.+.... ......+.+..... ..++.. ..|...-. +.+.....-|+++ + .+|+|||++++.. ..
T Consensus 138 Yl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~---~~~~~~~Egp~i~-k-~~g~YYl~~s~~~~~~ 207 (322)
T d2exha2 138 YLVNMYWDHRVDHHPFYGIVLQEYSV----EQKKLV-GEPKIIFK---GTDLRITEGPHLY-K-INGYYYLLTAEGGTRY 207 (322)
T ss_dssp EEEEEEECCCTTSCSEEEEEEEEEET----TTTEEE-EEEEEEEC---CCTTCCCEEEEEE-E-ETTEEEEEEEESCSST
T ss_pred EEEecccCCccCcCCccceEEeeecC----cCCeEC-CCcEEEEE---ecCCCcccCcEEE-E-ECCEEEEEEeCCCCCC
Confidence 9998765422 12222333222111 112222 22322111 1122345789865 4 4789999987653 22
Q ss_pred ccEEEEEEeCCCCC-cEE
Q 014220 209 KGLAILYRSKDFVH-WIK 225 (428)
Q Consensus 209 ~G~i~ly~S~Dl~~-W~~ 225 (428)
.-++.+++|+++.. |+.
T Consensus 208 ~y~v~~~rS~~~~GP~~~ 225 (322)
T d2exha2 208 NHAATIARSTSLYGPYEV 225 (322)
T ss_dssp TCEEEEEEESSTTCCCEE
T ss_pred CceEEEEEeCCCCccccc
Confidence 33688999998764 654
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=97.56 E-value=0.00049 Score=63.87 Aligned_cols=158 Identities=12% Similarity=0.107 Sum_probs=84.4
Q ss_pred ccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCC----CCCCccCCCCCCCCCCccCCCeEeeeEEEcCCCceEE
Q 014220 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKD----LINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133 (428)
Q Consensus 58 ~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~D----lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~l 133 (428)
+.-| -+++.+|+|||||.....+........+.+++.+ ..+|+..+..+......+......++++++.||+.++
T Consensus 64 ~WAP-~v~~~~g~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDp~v~~d~dG~~Yl 142 (318)
T d1gyha_ 64 LWAP-DIYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWM 142 (318)
T ss_dssp EEEE-EEEEETTEEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEE
T ss_pred eECC-EEEEEcCceEEEEEEecCCCcccceeEEEEeccCCCccccccccCceecccCCCCCCCceEccceEeecCCcEEE
Confidence 4445 4788999999999887654432233344443322 3688877654333222222223457788888899999
Q ss_pred EEcccCCCCcceEEEEEEcCC-C----CCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC-
Q 014220 134 FYTGIDPHNRQVQNLAVPKNL-S----DPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN- 207 (428)
Q Consensus 134 ~YTg~~~~~~~~q~lA~S~D~-~----d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~- 207 (428)
+|.+... .+.++...+. . ...+....+. ..+++... .......+..|.++ + .+|+|||++.+...
T Consensus 143 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~EgP~i~-k-~~g~yyl~yS~~~~~ 213 (318)
T d1gyha_ 143 SFGSFWG----GLKLFKLNDDLTRPAEPQEWHSIAKL-ERSVLMDD--SQAGSAQIEAPFIL-R-KGDYYYLFASWGLCC 213 (318)
T ss_dssp EECBSTT----CEEEEEBCTTSSSBCSSCCEEEEECC-CCCTTSCT--TSCCSCCEEEEEEE-E-ETTEEEEEEEESCCS
T ss_pred eccCCCC----CeeeEecCccceeecccccccccccc-ccceeecc--CCCCCceeecCEEE-E-ECCEEEEEEecCCCC
Confidence 9876432 1222222111 0 0000111111 12222222 22233456789864 4 48899999976531
Q ss_pred ----CccEEEEEEeCCCCC-cEE
Q 014220 208 ----RKGLAILYRSKDFVH-WIK 225 (428)
Q Consensus 208 ----~~G~i~ly~S~Dl~~-W~~ 225 (428)
....+.+++|+++.. |+.
T Consensus 214 ~~~~~~y~~~~~~s~~~~Gp~~~ 236 (318)
T d1gyha_ 214 RKGDSTYHLVVGRSKQVTGPYLD 236 (318)
T ss_dssp CGGGCCCEEEEEEESSTTSCCBC
T ss_pred CCCcccceeeeecccCCCCCccc
Confidence 123677888988764 543
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=97.47 E-value=0.0011 Score=61.75 Aligned_cols=150 Identities=11% Similarity=0.038 Sum_probs=87.1
Q ss_pred CCCccCCcceEEECCEEEEEEeeCCCC-CCCCCcEEEEEEeCCCC-CCccCCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 014220 55 KNWINDPNGVMIYKGIYHLFYQYNPKG-AVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (428)
Q Consensus 55 ~gw~nDPng~~~~~G~YHlFYq~~p~~-~~~g~~~Wgha~S~Dlv-~W~~~~~al~P~~~~D~~gv~SGsav~~~dg~~~ 132 (428)
.+-+.-|. +++.+|+|||||...... ..+.+...+.++|++.. .|++..... .. ...++++++.||+.+
T Consensus 67 ~~~~WAP~-v~~~~g~yylyys~~~~~~~~~~~~~~~~a~a~~p~Gp~~~~~~~~--~~------~~D~~~~~d~dg~~~ 137 (321)
T d1y7ba2 67 SGGIWAPD-LSYHDGKFWLIYTDVKVTDGMWKDCHNYLTTCESVDGVWSDPITLN--GS------GFDASLFHDNDGKKY 137 (321)
T ss_dssp TCEECSCE-EEEETTEEEEEEEEESCCSSSCCCEEEEEEEESSTTSCCCCCEECC--CS------CSCCEEEECTTSCEE
T ss_pred cCcccCce-EEEECCEEEEEEEeeccCCCCccceeeEeeecCCCCCCcccceeec--cc------ccCCcEEEEcCCCEE
Confidence 44577884 888999999999876543 23446778999998874 676543221 11 123667778889999
Q ss_pred EEEcccCCC----CcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-C
Q 014220 133 IFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-N 207 (428)
Q Consensus 133 l~YTg~~~~----~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-~ 207 (428)
++|.+.... ......++...+. ..+..... ..+.... .......|+++ + .+|.|||+.+... .
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~-----~~~~~Egp~v~-k-~~g~yyl~~s~~~~~ 205 (321)
T d1y7ba2 138 LVNMYWDQRTYNHNFYGIVLQEYSDK----EKKLIGKA-KIIYKGT-----DIKYTEGPHIY-H-IGDYYYLFTAEGGTT 205 (321)
T ss_dssp EEEEEECCCTTSCSEEEEEEEEEETT----TTEEEEEE-EEEECCC-----TTCCCEEEEEE-E-ETTEEEEEEEESCSS
T ss_pred EEEeccCCCccccCccceeeEeeCCC----cceEcCCc-eEEeecc-----CCCccccceEE-E-ECCEEEEEEcCCCCC
Confidence 988765432 1112223322221 12332211 1222222 12234688864 4 4788888876543 2
Q ss_pred CccEEEEEEeCCCCC-cEE
Q 014220 208 RKGLAILYRSKDFVH-WIK 225 (428)
Q Consensus 208 ~~G~i~ly~S~Dl~~-W~~ 225 (428)
..-.+.+++|+++.. |+.
T Consensus 206 ~~y~~~~~rs~~~~Gp~~~ 224 (321)
T d1y7ba2 206 YEHSETVARSKNIDGPYEI 224 (321)
T ss_dssp TTCEEEEEEESSTTCCCEE
T ss_pred CCcceEEEEEcccCCcccc
Confidence 233678899988653 543
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=97.31 E-value=0.00097 Score=62.02 Aligned_cols=149 Identities=15% Similarity=0.192 Sum_probs=83.2
Q ss_pred CCccCCcceEEECCEEEEEEeeCCCCCCCCCcEEEEEEeCC------CCCCccCCCCCCCCCCccCCCeEeeeEEEcCCC
Q 014220 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKD------LINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (428)
Q Consensus 56 gw~nDPng~~~~~G~YHlFYq~~p~~~~~g~~~Wgha~S~D------lv~W~~~~~al~P~~~~D~~gv~SGsav~~~dg 129 (428)
+.+.-| .+++.+|+|||||.....+. +....+.+++.- ...|++.++.+.+... +......++++.+.||
T Consensus 80 ~~~WAP-~v~~~~g~yyl~~t~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~iD~~~f~d~dG 155 (312)
T d1wl7a1 80 DHLWAP-DICFYNGIYYLYYSVSTFGK--NTSVIGLATNRTLDPRDPDYEWKDMGPVIHSTAS-DNYNAIDPNVVFDQEG 155 (312)
T ss_dssp CEEEEE-EEEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTT-SSSCCCSCEEEECTTS
T ss_pred CceEcc-eEEEeCCEEEEEEEeecCCc--ccceeeEEEEecccCCCCccccccccceecCCCC-CCCCcCCCceeEccCC
Confidence 344556 47889999999999876543 334455554321 2355554433322221 2234455778888889
Q ss_pred ceEEEEcccCCCCcceEEEEE-EcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeecC-
Q 014220 130 KPAIFYTGIDPHNRQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN- 207 (428)
Q Consensus 130 ~~~l~YTg~~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~~- 207 (428)
+.+++|.+... ...++. +.|. ..... ....+.... .+.+...+.-|+++ + .+|+|||++++...
T Consensus 156 ~~y~~~~~~~~----~i~~~~l~~d~-----~~~~~-~~~~i~~~~--~~~~~~~~EgP~v~-k-~~g~yYl~ys~~~~~ 221 (312)
T d1wl7a1 156 QPWLSFGSFWS----GIQLIQLDTET-----MKPAA-QAELLTIAS--RGEEPNAIEAPFIV-C-RNGYYYLFVSFDFCC 221 (312)
T ss_dssp CEEEEECBSTT----CEEEEEBCTTT-----CSBCT-TCCCEEEEC--CSSSSCCEEEEEEE-E-ETTEEEEEEEESCCS
T ss_pred cEEEeecCCCC----ceeEEEEcCcC-----CcCcC-CceEEEecc--cCCCCCcccccEEE-E-ECCcEEEEEecCCCc
Confidence 99999876432 123332 2221 11111 112333222 22233446789865 4 47899999976531
Q ss_pred ----CccEEEEEEeCCCCC
Q 014220 208 ----RKGLAILYRSKDFVH 222 (428)
Q Consensus 208 ----~~G~i~ly~S~Dl~~ 222 (428)
...++.+++|+++..
T Consensus 222 ~~~~~~~~~~~a~s~~~~G 240 (312)
T d1wl7a1 222 RGIESTYKIAVGRSKDITG 240 (312)
T ss_dssp SGGGCCCEEEEEEESSTTC
T ss_pred CCCCCCceEEEEecCCCCc
Confidence 234688999988764
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=96.29 E-value=0.014 Score=57.19 Aligned_cols=145 Identities=10% Similarity=0.064 Sum_probs=83.5
Q ss_pred ECCEEEEEEeeCCCCCC-CC--CcEEEEE-EeCCCCCCc---cCCCCCCCCCCc----------------cCCCeEeeeE
Q 014220 67 YKGIYHLFYQYNPKGAV-WG--NIVWAHS-TSKDLINWI---PHDPAIYPSQQS----------------DINGCWSGSA 123 (428)
Q Consensus 67 ~~G~YHlFYq~~p~~~~-~g--~~~Wgha-~S~Dlv~W~---~~~~al~P~~~~----------------D~~gv~SGsa 123 (428)
.||+++|||........ .. ...-+++ .|.+.+.|+ ..++.+.|++.+ |....-.+.+
T Consensus 138 ~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~v 217 (440)
T d1oyga_ 138 SDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY 217 (440)
T ss_dssp TTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEEE
T ss_pred cCCeEEEEEEeccCCCCCcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCce
Confidence 59999999986532211 11 1223343 444445544 344567776432 1223456777
Q ss_pred EEcCCCceEEEEcccCCC--Cc---------------------------------------ceEEEEEEcCCCCCcccee
Q 014220 124 TILPGEKPAIFYTGIDPH--NR---------------------------------------QVQNLAVPKNLSDPYLREW 162 (428)
Q Consensus 124 v~~~dg~~~l~YTg~~~~--~~---------------------------------------~~q~lA~S~D~~d~~l~~w 162 (428)
+. ++|+.+|++.|+... +. ..++++...+ ++..|
T Consensus 218 ~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~----D~~~W 292 (440)
T d1oyga_ 218 VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELND----DYTLK 292 (440)
T ss_dssp EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECT----TSSEE
T ss_pred ee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCC----Ccccc
Confidence 65 489999999886421 00 1233443222 25789
Q ss_pred EecCCCceecCCCCCCCCCCCccCCeEEEECCCCeEEEEEeeec-----C---Ccc-EEEEEEeCCCC-CcE
Q 014220 163 VKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----N---RKG-LAILYRSKDFV-HWI 224 (428)
Q Consensus 163 ~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~~g~y~Mv~ga~~-----~---~~G-~i~ly~S~Dl~-~W~ 224 (428)
+.. .|++... . ....+.-|.|+. .+|+|||+..++. + ..+ .+..|.|+.+. .|+
T Consensus 293 e~~--~pLl~a~--~--v~d~~ErP~I~~--~nGKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~ 356 (440)
T d1oyga_ 293 KVM--KPLIASN--T--VTDEIERANVFK--MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 356 (440)
T ss_dssp EEE--EEEEECT--T--TCSCCEEEEEEE--ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred eec--Ccceecc--C--CCCeEECCEEEE--ECCEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCe
Confidence 976 4788654 2 124567898654 4899999988763 1 112 45678888776 475
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=91.86 E-value=0.55 Score=41.90 Aligned_cols=102 Identities=13% Similarity=0.050 Sum_probs=61.3
Q ss_pred eE-eeeEEEcCCCceEEEEcccCC----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEE
Q 014220 118 CW-SGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL 192 (428)
Q Consensus 118 v~-SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~ 192 (428)
+| .++.+..+||.++++|.+... .....+.+..|.|++ ++|... ..|...+ .........+|.++..
T Consensus 20 ~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~--~~~~~~~~~~~~~v~~ 91 (356)
T d1w8oa3 20 NYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQ--TTAPIKGFSDPSYLVD 91 (356)
T ss_dssp CEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCB--CSSSCBEEEEEEEEEC
T ss_pred eeEeCEEEEECCCCEEEEEeeeeCCCCCCCCceEEEEEccCCC----CCCCCC--EEeecCC--CCCcccccccceEEEe
Confidence 45 577777779999999976432 234556778999976 799752 2233322 2222345678887766
Q ss_pred CCCCeEEEEEeeecC---------------CccEEEEEEeC-CCCCcEEcc
Q 014220 193 GPDKRWRVIIGSKIN---------------RKGLAILYRSK-DFVHWIKAK 227 (428)
Q Consensus 193 ~~~g~y~Mv~ga~~~---------------~~G~i~ly~S~-Dl~~W~~~~ 227 (428)
..+|.-+++...... ....+.+++|+ +...|+...
T Consensus 92 ~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~ 142 (356)
T d1w8oa3 92 RETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (356)
T ss_dssp TTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CCCCeEEEEEeeeccCCcccccccCCCCCCcEEEEEEEecCCccccccccc
Confidence 566765444433220 01246677775 477898643
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=91.54 E-value=0.042 Score=50.94 Aligned_cols=94 Identities=10% Similarity=-0.006 Sum_probs=58.8
Q ss_pred CCeEeeeEEEcCCCceEEEEcccCCCCcceEEEEE-EcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEEECC
Q 014220 116 NGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAV-PKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP 194 (428)
Q Consensus 116 ~gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~lA~-S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~~~~ 194 (428)
..||..+|....+|+++|++..-.++......++. +..++ .+|+..+ .|+. ...||+|.+-
T Consensus 27 ~DVyN~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~----~~f~~~~-~p~~-----------glEDPrvt~i-- 88 (310)
T d2b4wa1 27 YDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGK----DEFTAVP-ELSW-----------ELEDPYIAKI-- 88 (310)
T ss_dssp CEEESCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEET----TEEEECT-TCCB-----------SCEEEEEEEE--
T ss_pred cceecCCcEEEECCEEEEEEEEEccCcceEEEEEEEEecCC----cceEECC-cccc-----------cCCCCCEEeE--
Confidence 45999888544589999999876554434444553 44433 5777653 4543 3469998764
Q ss_pred CCeEEEEEeeecCCccEEEEEEeCCCCCcEEcc
Q 014220 195 DKRWRVIIGSKINRKGLAILYRSKDFVHWIKAK 227 (428)
Q Consensus 195 ~g~y~Mv~ga~~~~~G~i~ly~S~Dl~~W~~~~ 227 (428)
+|+|+|-..+-....+.+.+|++.|++.|....
T Consensus 89 ~g~lv~~~t~~~~~~~~~~~~~t~~~r~~~~~l 121 (310)
T d2b4wa1 89 NNEMIFGGTRVRKNGNAILSYYGYFYRGTPDEL 121 (310)
T ss_dssp TTEEEEEEEEEC-----CCCEEEEEEEEETTEE
T ss_pred CCEEEEEEEEecCCCCcceEEEeeeeecchhcC
Confidence 688877655444444566788999988886433
|
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=85.77 E-value=8.1 Score=35.25 Aligned_cols=40 Identities=10% Similarity=0.178 Sum_probs=27.7
Q ss_pred eeEEEcCCCceEEEEcccCCC---CcceEEEEEEcCCCCCccceeEec
Q 014220 121 GSATILPGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKS 165 (428)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~---~~~~q~lA~S~D~~d~~l~~w~k~ 165 (428)
.+.++..+|+++|||--+... +...-++|+|+| |+||+..
T Consensus 23 PnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~D-----Lv~W~~~ 65 (353)
T d1y4wa2 23 PNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISED-----LTHWEEK 65 (353)
T ss_dssp EEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESS-----SSSCEEE
T ss_pred CccceEECCEEEEEEecCCCCCCCCCeEEEEEEecc-----ccceeEC
Confidence 444444699999999754221 334468999998 5899975
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=85.48 E-value=4.4 Score=36.81 Aligned_cols=77 Identities=12% Similarity=0.074 Sum_probs=46.9
Q ss_pred CeE-eeeEEEcCCCceEEEEcccCC----CCcceEEEEEEcCCCCCccceeEecCCCceecCCCCCCCCCCCccCCeEEE
Q 014220 117 GCW-SGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAW 191 (428)
Q Consensus 117 gv~-SGsav~~~dg~~~l~YTg~~~----~~~~~q~lA~S~D~~d~~l~~w~k~~~nPvi~~~~~~~~~~~~~RDP~V~~ 191 (428)
.+| .++.+...+|.+++++.+... .....+.++.|.|++ ++|.+. ..|...+ .......+.||..++
T Consensus 31 ~~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgG----kTWs~~--~~i~~~~--~~~~~~~~~~p~~v~ 102 (379)
T d3sila_ 31 KYFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGG----KTWNKK--IAIYNDR--VNSKLSRVMDPTCIV 102 (379)
T ss_dssp CEEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSS----SCCEEE--EEECCCC--SCTTTCEEEEEEEEE
T ss_pred eeEeccEEEEECCCcEEEEEeeEECCCCCCCCceEEEEEecCCc----cCCCCC--EEccCCC--CCccccccCCccEEE
Confidence 345 677777789999999976322 122334566888876 899874 2333322 222235677998777
Q ss_pred ECCCCeEEEE
Q 014220 192 LGPDKRWRVI 201 (428)
Q Consensus 192 ~~~~g~y~Mv 201 (428)
...+|+-.++
T Consensus 103 ~~~~g~~~~~ 112 (379)
T d3sila_ 103 ANIQGRETIL 112 (379)
T ss_dssp EEETTEEEEE
T ss_pred ECCCCCEEEE
Confidence 6566665433
|