Citrus Sinensis ID: 014343

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420------
MGFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFRLAFGQSSLFASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCPEIDFVERVS
ccHHHHHHHHHHHHHHHcccEEEEEccccEEEEEccHHHHHHHHHcccccccccccccHHHHcccccccccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHcccccccccccHHHHHHHHHHEEcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHcccHHHHHHHHHHccccccHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcEEEccccccccccccccccEEccccccEEEEEEccc
ccHHHHHHHHHHHHHHccccEEEEEccccEEEEEEcHHHHHHHHccccccccHHHHHHHHHccccEEEEccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccHHHHHHccHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHccEEcccccEEEEEEccc
MGFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSkaedkppltgrAFRLAfgqsslfastfDRVKKRRVTLSTELNGRllergkvipaRVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDacfwasysvtpfwkrGFWRYQHLCEKLKCLTQDIIQQCQRNcklisgmdhnfdnETAYKRMEAalggsssfdalvsqepsgylqareepcrnimGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARkglgekdqqSVDNMLLLLATIYESarllpagpflqrcslkhgnaeeyvdprqssfvlndpnnnaaflpfgsgsracvgqKYVTQGIATLFASLLERYEIrlqpgseknpkptvnncvfqllpcpeidfvervs
MGFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFRLAFgqsslfastfdrvkkrrvtlstelngrllergkviparVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLqpgseknpkptvNNCVFqllpcpeidfvervs
MGFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFRLAFGQSSLFASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCPEIDFVERVS
**FICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEML********LTGRAFRLAFGQSSLFASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYK**********************YLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVD****SFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRL**********TVNNCVFQLLPCPEIDFV****
MGFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFRLAFGQSSLFASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQ*************************LGGSSSFDALVSQEP***LQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCPEIDFVERV*
MGFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFRLAFGQSSLFASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCPEIDFVERVS
MGFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFRLAFGQSSLFASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCPEIDFVER**
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MGFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFRLAFGQSSLFASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCPEIDFVERVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query426 2.2.26 [Sep-21-2011]
P29981511 Cytochrome P450 4C1 OS=Bl N/A no 0.849 0.708 0.222 2e-13
Q9VMS8511 Probable cytochrome P450 yes no 0.375 0.313 0.260 9e-12
Q9HCS2524 Cytochrome P450 4F12 OS=H yes no 0.854 0.694 0.201 1e-11
Q9V4T5531 Probable cytochrome P450 no no 0.427 0.342 0.255 6e-11
Q9VL92526 Cytochrome P450 4e3 OS=Dr no no 0.502 0.406 0.246 3e-10
Q9VMS9509 Probable cytochrome P450 no no 0.387 0.324 0.235 4e-10
P98187520 Cytochrome P450 4F8 OS=Ho no no 0.877 0.719 0.206 5e-10
Q9HBI6524 Cytochrome P450 4F11 OS=H no no 0.877 0.713 0.226 8e-10
Q27606526 Cytochrome P450 4e2 OS=Dr no no 0.424 0.344 0.263 1e-09
Q8N118509 Cytochrome P450 4X1 OS=Ho no no 0.845 0.707 0.225 1e-09
>sp|P29981|CP4C1_BLADI Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP4C1 PE=2 SV=1 Back     alignment and function desciption
 Score = 77.4 bits (189), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 171/422 (40%), Gaps = 60/422 (14%)

Query: 17  YGSVVKLWLGPTKLLVSIKEPALIKEML--SKAEDKPPLTGRAFRLAFGQSSLFASTFDR 74
           YG + ++W GP    V +  P  ++ +L  +K  DK  L     R   G+  L   T  +
Sbjct: 70  YGPLYRIWAGPIAQ-VGLTRPEHVELILRDTKHIDKS-LVYSFIRPWLGEG-LLTGTGAK 126

Query: 75  VKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMAFSLLGA 134
               R  ++   + ++L+    +     + L++++   +G  +        H A  ++  
Sbjct: 127 WHSHRKMITPTFHFKILDIFVDVFVEKSEILVKKLQSKVGGKDFDIYPFITHCALDIICE 186

Query: 135 TIFGDEFFAWSKA------TVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLK 188
           T  G +  A  ++       VYE   +T+ +    W    V         RY      L 
Sbjct: 187 TAMGIQMNAQEESESEYVKAVYEISELTMQRSVRPWLHPKVIFDLTTMGKRYAECLRILH 246

Query: 189 CLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSS----FDALVSQEPSGYLQ 244
             T  +IQ+ +++ + ++GM     NE      E  L G        D L+    +G   
Sbjct: 247 GFTNKVIQE-RKSLRQMTGMKPTISNE------EDELLGKKKRLAFLDLLLEASENGTKM 299

Query: 245 AREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKD-QQS 303
           +  +    +   MF G+ TT+  +   L  L +H +IQ+K+Y E+    +G       + 
Sbjct: 300 SDTDIREEVDTFMFEGHDTTSAGICWALFLLGSHPEIQDKVYEELDHIFQGSDRSTTMRD 359

Query: 304 VDNMLLLLATIYESARLLPAGPFLQR----------------CSLK------HGNAEEYV 341
           + +M  L   I ES RL P+ PF+ R                C +       H N ++Y 
Sbjct: 360 LADMKYLERVIKESLRLFPSVPFIGRVLKEDTKIGDYLVPAGCMMNLQIYHVHRNQDQYP 419

Query: 342 DPRQSSFVLNDPNN----------NAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYE 391
           +P   +F   +P+N            A++PF +G R C+GQK+ T    T+ +S+L  ++
Sbjct: 420 NP--EAF---NPDNFLPERVAKRHPYAYVPFSAGPRNCIGQKFATLEEKTVLSSILRNFK 474

Query: 392 IR 393
           +R
Sbjct: 475 VR 476
Involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.
Blaberus discoidalis (taxid: 6981)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 4EC: .EC: 1
>sp|Q9VMS8|C4AC2_DROME Probable cytochrome P450 4ac2 OS=Drosophila melanogaster GN=Cyp4ac2 PE=2 SV=4 Back     alignment and function description
>sp|Q9HCS2|CP4FC_HUMAN Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE=1 SV=2 Back     alignment and function description
>sp|Q9V4T5|CP4E1_DROME Probable cytochrome P450 4e1 OS=Drosophila melanogaster GN=Cyp4e1 PE=2 SV=1 Back     alignment and function description
>sp|Q9VL92|CP4E3_DROME Cytochrome P450 4e3 OS=Drosophila melanogaster GN=Cyp4e3 PE=2 SV=1 Back     alignment and function description
>sp|Q9VMS9|C4AC1_DROME Probable cytochrome P450 4ac1 OS=Drosophila melanogaster GN=Cyp4ac1 PE=2 SV=1 Back     alignment and function description
>sp|P98187|CP4F8_HUMAN Cytochrome P450 4F8 OS=Homo sapiens GN=CYP4F8 PE=1 SV=1 Back     alignment and function description
>sp|Q9HBI6|CP4FB_HUMAN Cytochrome P450 4F11 OS=Homo sapiens GN=CYP4F11 PE=2 SV=3 Back     alignment and function description
>sp|Q27606|CP4E2_DROME Cytochrome P450 4e2 OS=Drosophila melanogaster GN=Cyp4e2 PE=2 SV=2 Back     alignment and function description
>sp|Q8N118|CP4X1_HUMAN Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query426
359487151 543 PREDICTED: cytochrome P450 734A1 [Vitis 0.981 0.769 0.632 1e-161
296087804 568 unnamed protein product [Vitis vinifera] 0.981 0.735 0.599 1e-159
255569165512 cytochrome P450, putative [Ricinus commu 0.950 0.791 0.573 1e-140
147843330 1033 hypothetical protein VITISV_022851 [Viti 0.826 0.340 0.580 1e-128
356517698 562 PREDICTED: cytochrome P450 4F12-like [Gl 0.983 0.745 0.498 1e-125
449458696 577 PREDICTED: cytochrome P450 93A2-like [Cu 0.988 0.729 0.501 1e-125
449516968 557 PREDICTED: probable cytochrome P450 554A 0.943 0.721 0.5 1e-122
224073037507 cytochrome P450 [Populus trichocarpa] gi 0.922 0.775 0.518 1e-121
125559360 565 hypothetical protein OsI_27078 [Oryza sa 0.967 0.729 0.391 8e-87
115473701 566 Os07g0644600 [Oryza sativa Japonica Grou 0.971 0.731 0.384 1e-86
>gi|359487151|ref|XP_002265899.2| PREDICTED: cytochrome P450 734A1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 287/454 (63%), Positives = 344/454 (75%), Gaps = 36/454 (7%)

Query: 9   VLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFRLAFGQSSLF 68
           +L+ESH KYGSVVKLWLGPT+LLVSIK+P LIKEML KAEDK PLTGRAF+LAFG SSLF
Sbjct: 88  LLSESHNKYGSVVKLWLGPTQLLVSIKDPVLIKEMLLKAEDKLPLTGRAFQLAFGPSSLF 147

Query: 69  ASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMA 128
           +S+FD+V+KRR  L+ ELNG LL+R  VI  +VVD +ME++H I+GKG + CK++SQHMA
Sbjct: 148 SSSFDKVQKRRELLAAELNGYLLQRANVISTKVVDHVMEKLHAIMGKGTLDCKIVSQHMA 207

Query: 129 FSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHLCEKLK 188
           FS++GAT+FGD F AWSKA+VYEEL M IAKDACFWASY VTPFWK+GFWRYQ LC KLK
Sbjct: 208 FSIMGATLFGDAFLAWSKASVYEELLMMIAKDACFWASYGVTPFWKQGFWRYQRLCMKLK 267

Query: 189 CLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSF-----DALVSQEPSGYL 243
            LTQD I+QC++N KL S MD N ++E +    + A     S      D L SQE +G++
Sbjct: 268 SLTQDGIEQCRQNYKLFSHMDKNSNSEISNPETKNAPEAPFSSGILMPDNLSSQECNGHV 327

Query: 244 QAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQS 303
            AREEPC NIM VMFHG LTTAGL+GNILARLATH +IQ+KIYSEIIM+RKG  ++ QQ+
Sbjct: 328 NAREEPCGNIMRVMFHGCLTTAGLIGNILARLATHPEIQDKIYSEIIMSRKGAQKQKQQN 387

Query: 304 VDNMLLLLATIYESARLLPAGPFLQRCSLKH----------------------------- 334
           VD ML+LLAT+YESARL+PAGP LQRCSLKH                             
Sbjct: 388 VDKMLVLLATVYESARLMPAGPLLQRCSLKHDLNLKTGLTIPAGAILVVPVQLVQMDDSC 447

Query: 335 -GNAEEYVDP-RQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
            GN     +P R  S +L+DPN+NAAFLPFGSG+RACVGQK+V  G+A LFASLLE YEI
Sbjct: 448 WGNDARQFNPYRFFSCILDDPNHNAAFLPFGSGTRACVGQKFVILGVAALFASLLEHYEI 507

Query: 393 RLQPGSEKNPKPTVNNCVFQLLPCPEIDFVERVS 426
           RLQPGSE +PKPT+N+ V QLLP P+I F++R S
Sbjct: 508 RLQPGSEDDPKPTLNDSVLQLLPSPKIVFMKRNS 541

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296087804|emb|CBI35060.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255569165|ref|XP_002525551.1| cytochrome P450, putative [Ricinus communis] gi|223535130|gb|EEF36810.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147843330|emb|CAN78431.1| hypothetical protein VITISV_022851 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356517698|ref|XP_003527523.1| PREDICTED: cytochrome P450 4F12-like [Glycine max] Back     alignment and taxonomy information
>gi|449458696|ref|XP_004147083.1| PREDICTED: cytochrome P450 93A2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449516968|ref|XP_004165518.1| PREDICTED: probable cytochrome P450 554A1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224073037|ref|XP_002303954.1| cytochrome P450 [Populus trichocarpa] gi|222841386|gb|EEE78933.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|125559360|gb|EAZ04896.1| hypothetical protein OsI_27078 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|115473701|ref|NP_001060449.1| Os07g0644600 [Oryza sativa Japonica Group] gi|33146730|dbj|BAC79621.1| hypothetical protein [Oryza sativa Japonica Group] gi|50509943|dbj|BAD30264.1| hypothetical protein [Oryza sativa Japonica Group] gi|113611985|dbj|BAF22363.1| Os07g0644600 [Oryza sativa Japonica Group] gi|215768065|dbj|BAH00294.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query426
TAIR|locus:2034476595 CYP97A3 ""cytochrome P450, fam 0.720 0.515 0.217 1.7e-10
ZFIN|ZDB-GENE-061103-601513 cyp4v8 "cytochrome P450, famil 0.779 0.647 0.198 2.8e-09
FB|FBgn0031694511 Cyp4ac2 "Cyp4ac2" [Drosophila 0.633 0.528 0.211 3.9e-09
MGI|MGI:88610503 Cyp3a13 "cytochrome P450, fami 0.305 0.258 0.306 9.9e-09
MGI|MGI:1930638503 Cyp3a25 "cytochrome P450, fami 0.180 0.153 0.324 1e-08
TAIR|locus:2023848517 CYP78A5 ""cytochrome P450, fam 0.676 0.557 0.223 1.3e-08
UNIPROTKB|G1R020524 CYP4F11 "Uncharacterized prote 0.704 0.572 0.231 1.3e-08
TAIR|locus:2102023539 LUT1 "LUTEIN DEFICIENT 1" [Ara 0.704 0.556 0.219 1.7e-08
ZFIN|ZDB-GENE-061103-88510 cyp4v7 "cytochrome P450, famil 0.748 0.625 0.201 1.9e-08
FB|FBgn0031695509 Cyp4ac3 "Cyp4ac3" [Drosophila 0.300 0.251 0.285 2e-08
TAIR|locus:2034476 CYP97A3 ""cytochrome P450, family 97, subfamily A, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 127 (49.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
 Identities = 73/336 (21%), Positives = 135/336 (40%)

Query:    17 YGSVVKLWLGPTKLLVSIKEPALIKEML---SKAEDKPPLTGRAFRLAFGQSSLFASTFD 73
             YG + +L  GP   L+ + +P++ K +L   +KA  K  L         G+  L  +  +
Sbjct:   139 YGGIFRLTFGPKSFLI-VSDPSIAKHILKDNAKAYSKGILA-EILDFVMGKG-LIPADGE 195

Query:    74 RVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGN-ISCKMISQHMAFSLL 132
               ++RR  +   L+ + +     +     D L +++     KG  +  + +   +   ++
Sbjct:   196 IWRRRRRAIVPALHQKYVAAMISLFGEASDRLCQKLDAAALKGEEVEMESLFSRLTLDII 255

Query:   133 GATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFW-----RYQHLCEKL 187
             G  +F  +F + +  T   E   T+ ++A    S S  P W    W     R + +   L
Sbjct:   256 GKAVFNYDFDSLTNDTGVIEAVYTVLREAED-RSVSPIPVWDIPIWKDISPRQRKVATSL 314

Query:   188 KCLTQDIIQQCQRNCK-LISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSGYLQAR 246
             K L  D +      CK ++   +  F  E   +R  + L     F  L S +     Q R
Sbjct:   315 K-LINDTLDDLIATCKRMVEEEELQFHEEYMNERDPSIL----HF-LLASGDDVSSKQLR 368

Query:   247 EEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDN 306
             ++    +M ++  G+ T+A ++      L T   +  K+  E+      +G++     D 
Sbjct:   369 DD----LMTMLIAGHETSAAVLTWTFYLLTTEPSVVAKLQEEVDSV---IGDRFPTIQDM 421

Query:   307 MLLLLAT--IYESARLLPAGPFLQRCSLKHGNAEEY 340
               L   T  + ES RL P  P L R S+ +    EY
Sbjct:   422 KKLKYTTRVMNESLRLYPQPPVLIRRSIDNDILGEY 457
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IMP
GO:0016117 "carotenoid biosynthetic process" evidence=RCA;IMP
GO:0016123 "xanthophyll biosynthetic process" evidence=IGI
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
ZFIN|ZDB-GENE-061103-601 cyp4v8 "cytochrome P450, family 4, subfamily V, polypeptide 8" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0031694 Cyp4ac2 "Cyp4ac2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
MGI|MGI:88610 Cyp3a13 "cytochrome P450, family 3, subfamily a, polypeptide 13" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
MGI|MGI:1930638 Cyp3a25 "cytochrome P450, family 3, subfamily a, polypeptide 25" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
TAIR|locus:2023848 CYP78A5 ""cytochrome P450, family 78, subfamily A, polypeptide 5"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G1R020 CYP4F11 "Uncharacterized protein" [Nomascus leucogenys (taxid:61853)] Back     alignment and assigned GO terms
TAIR|locus:2102023 LUT1 "LUTEIN DEFICIENT 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061103-88 cyp4v7 "cytochrome P450, family 4, subfamily V, polypeptide 7" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0031695 Cyp4ac3 "Cyp4ac3" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query426
pfam00067461 pfam00067, p450, Cytochrome P450 2e-27
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 2e-10
PTZ00404482 PTZ00404, PTZ00404, cytochrome P450; Provisional 4e-10
PLN02738633 PLN02738, PLN02738, carotene beta-ring hydroxylase 6e-07
PLN02936489 PLN02936, PLN02936, epsilon-ring hydroxylase 1e-06
PLN02183516 PLN02183, PLN02183, ferulate 5-hydroxylase 2e-05
PLN02394503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 6e-05
PLN02290516 PLN02290, PLN02290, cytokinin trans-hydroxylase 3e-04
PLN02196463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 0.001
PLN00168519 PLN00168, PLN00168, Cytochrome P450; Provisional 0.002
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information 
 Score =  113 bits (284), Expect = 2e-27
 Identities = 92/445 (20%), Positives = 161/445 (36%), Gaps = 71/445 (15%)

Query: 8   EVLAESHEKYGSVVKLWLGPTKLLV-----SIKEPALIKE-MLSKAEDKPPLTGRAFRLA 61
            V  +  +KYG + +L+LGP  ++V     ++KE  LIK+          P    +    
Sbjct: 24  SVFTKLQKKYGPIFRLYLGPKPVVVLSGPEAVKE-VLIKKGEEFSGRPDEPWFATSRGPF 82

Query: 62  FGQSSLFASTFDRVKKRRVTLSTELNGRLLERGKVIP--ARVVDCLMERIHD-ILGKGNI 118
            G+  +FA+   R ++ R  L+         +    P        L+E++       G I
Sbjct: 83  LGKGIVFANG-PRWRQLRRFLTPTF--TSFGKLSFEPRVEEEARDLVEKLRKTAGEPGVI 139

Query: 119 SCKMISQHMAFSLLGATIFGDEFFAW--SKATVYEELF-----MTIAKDACFWASYSVTP 171
               +    A +++ + +FG+ F +    K     +       +  +        + +  
Sbjct: 140 DITDLLFRAALNVICSILFGERFGSLEDPKFLELVKAVQELSSLLSSPSPQLLDLFPILK 199

Query: 172 FWKRGFWR-YQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETA-YKRMEAALGGSS 229
           ++     R  +   +K+K L   +I++ +    L S      D   A     E   G   
Sbjct: 200 YFPGPHGRKLKRARKKIKDLLDKLIEERRET--LDSAKKSPRDFLDALLLAKEEEDGSKL 257

Query: 230 SFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEI 289
           + + L                  ++ + F G  TT+  +   L  LA H ++QEK+  EI
Sbjct: 258 TDEELR---------------ATVLELFFAGTDTTSSTLSWALYELAKHPEVQEKLREEI 302

Query: 290 IMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPF-LQRCSLK--------------- 333
                         + NM  L A I E+ RL P  P  L R   K               
Sbjct: 303 DEVIGDKRSPTYDDLQNMPYLDAVIKETLRLHPVVPLLLPREVTKDTVIPGYLIPKGTLV 362

Query: 334 -------HGNAEEYVDPRQSSFVL---NDPNNNA----AFLPFGSGSRACVGQKYVTQGI 379
                  H + E + +P    F      D N       AFLPFG+G R C+G++     +
Sbjct: 363 IVNLYALHRDPEVFPNP--EEFDPERFLDENGKFRKSFAFLPFGAGPRNCLGERLARMEM 420

Query: 380 ATLFASLLERYEIRLQPGSEKNPKP 404
               A+LL+ +E+ L PG++     
Sbjct: 421 KLFLATLLQNFEVELPPGTDPPDID 445

Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures. Length = 461
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 426
KOG0156489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
KOG0159519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 100.0
KOG0158499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 100.0
PLN02738633 carotene beta-ring hydroxylase 100.0
PLN03234499 cytochrome P450 83B1; Provisional 100.0
PLN02971543 tryptophan N-hydroxylase 100.0
PLN02394503 trans-cinnamate 4-monooxygenase 100.0
PTZ00404482 cytochrome P450; Provisional 100.0
PLN02183516 ferulate 5-hydroxylase 100.0
PLN02687517 flavonoid 3'-monooxygenase 100.0
PLN02290516 cytokinin trans-hydroxylase 100.0
PLN00168519 Cytochrome P450; Provisional 100.0
PLN00110504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
KOG0157497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 100.0
PLN02936489 epsilon-ring hydroxylase 100.0
PLN02966502 cytochrome P450 83A1 100.0
PF00067463 p450: Cytochrome P450 p450 superfamily signature b 100.0
PLN03112514 cytochrome P450 family protein; Provisional 100.0
PLN02500490 cytochrome P450 90B1 100.0
PLN02655466 ent-kaurene oxidase 100.0
PLN02169500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
PLN02774463 brassinosteroid-6-oxidase 100.0
PLN03195516 fatty acid omega-hydroxylase; Provisional 100.0
PLN03018534 homomethionine N-hydroxylase 100.0
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 100.0
PLN02196463 abscisic acid 8'-hydroxylase 100.0
PLN02426502 cytochrome P450, family 94, subfamily C protein 100.0
PLN02302490 ent-kaurenoic acid oxidase 100.0
PLN02987472 Cytochrome P450, family 90, subfamily A 100.0
KOG0684486 consensus Cytochrome P450 [Secondary metabolites b 100.0
PLN02648480 allene oxide synthase 100.0
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 100.0
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.3e-64  Score=467.69  Aligned_cols=372  Identities=21%  Similarity=0.248  Sum_probs=307.4

Q ss_pred             hhHHHHHHHHHHHhCCeeEEeecCcceEEEecCHHHHHHHHHhcCCCCCccccc---cc-cccCCCCcccc-CchhHHHh
Q 014343            4 ICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRA---FR-LAFGQSSLFAS-TFDRVKKR   78 (426)
Q Consensus         4 ~~~~~~~~~~~~~yG~v~~~~~g~~~~~v~v~~p~~i~~il~~~~~~~~~~~~~---~~-~~~~~~~~~~~-~g~~w~~~   78 (426)
                      ..+++.+.+|+++|||||.+|+|+.++ |+++|+++++|++.+++..+..++..   .. ..++..+++++ +|+.|+.+
T Consensus        46 ~~~h~~~~~ls~~yGpi~tl~lG~~~~-Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~  124 (489)
T KOG0156|consen   46 LPPHRSFRKLSKKYGPVFTLRLGSVPV-VVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREM  124 (489)
T ss_pred             CchhHHHHHHHHHhCCeEEEEecCceE-EEECCHHHHHHHHHhCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHH
Confidence            358999999999999999999999987 88999999999999998887666642   12 33366788877 89999999


Q ss_pred             hhccc-ccccHHHHhccCCchHHHHHHHHHHHHhhhCC-CceeHHHHHHHHHHHHHHHHhhCCCcccc--chhhHHHHHH
Q 014343           79 RVTLS-TELNGRLLERGKVIPARVVDCLMERIHDILGK-GNISCKMISQHMAFSLLGATIFGDEFFAW--SKATVYEELF  154 (426)
Q Consensus        79 R~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~vd~~~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~  154 (426)
                      ||+.. .+++...++.......++++.+++.+.+ ... .+||+...+..++.+++++++||.+++..  +....+..++
T Consensus       125 Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~  203 (489)
T KOG0156|consen  125 RRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELV  203 (489)
T ss_pred             HHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHH
Confidence            99665 7888888888877788999999999987 223 68999999999999999999999999653  2223466666


Q ss_pred             HHHHHhhhhhcccccchh---hhh---hh-hhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcCcchHHHHHHHhhhcCC
Q 014343          155 MTIAKDACFWASYSVTPF---WKR---GF-WRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGG  227 (426)
Q Consensus       155 ~~~~~~~~~~~~~~~~p~---~~~---~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (426)
                      ..............++|.   |.+   +. ++......++..+++++|+++++..                   .. +..
T Consensus       204 ~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-------------------~~-~~~  263 (489)
T KOG0156|consen  204 EESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-------------------GD-EEG  263 (489)
T ss_pred             HHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------------cc-CCC
Confidence            665555544444455552   222   23 4445555568889999999987421                   11 222


Q ss_pred             CCHHHHhhhc--CCCCCCCCchhHHHHHHHHHHhchhchHHHHHHHHHHHhhChhHHHHHHHHHHHHhccCCCCChhhhh
Q 014343          228 SSSFDALVSQ--EPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVD  305 (426)
Q Consensus       228 ~d~~~~ll~~--~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~~~~~l~  305 (426)
                      .|++|.+|+.  .++...++++++...+..+++||.|||++|+.|++.+|++||++|+|+++||++++|.++.++.+|+.
T Consensus       264 ~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~  343 (489)
T KOG0156|consen  264 RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLP  343 (489)
T ss_pred             CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhc
Confidence            8999999982  22222299999999999999999999999999999999999999999999999999998889999999


Q ss_pred             hhHhHHHHHHhhhccCCCCcccccccccCCCCc-cccCCCCC-------------------------CcccCC--CCCCC
Q 014343          306 NMLLLLATIYESARLLPAGPFLQRCSLKHGNAE-EYVDPRQS-------------------------SFVLND--PNNNA  357 (426)
Q Consensus       306 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~-g~~ip~gt-------------------------Rf~~~~--~~~~~  357 (426)
                      +||||+|||+|++|+||++|....+.+.+|+.+ ||.|||||                         ||++++  .....
T Consensus       344 ~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d~~~~~~  423 (489)
T KOG0156|consen  344 KLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSNDGKGLDF  423 (489)
T ss_pred             cCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCccccCCce
Confidence            999999999999999999998654455689999 99999999                         898863  34788


Q ss_pred             cccccCCCCCCCcCcHHHHHHHHHHHHHHHhhceeeeCCC
Q 014343          358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPG  397 (426)
Q Consensus       358 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  397 (426)
                      .++|||.|+|+|||..+|.+++.++++.|+++|||+++++
T Consensus       424 ~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~  463 (489)
T KOG0156|consen  424 KLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG  463 (489)
T ss_pred             EecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC
Confidence            9999999999999999999999999999999999999877

>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query426
3ua1_A487 Crystal Structure Of The Cytochrome P4503a4-Bromoer 1e-08
1tqn_A486 Crystal Structure Of Human Microsomal P450 3a4 Leng 1e-08
1w0e_A485 Crystal Structure Of Human Cytochrome P450 3a4 Leng 1e-08
3ruk_A494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 2e-06
3k1o_A458 Crystal Structure Of Sterol 14-alpha Demethylase (c 1e-05
2wuz_A473 X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In 1e-05
3khm_A464 Crystal Structure Of Sterol 14alpha-Demethylase (Cy 1e-05
3k9v_A482 Crystal Structure Of Rat Mitochondrial P450 24a1 S5 5e-05
3l4d_A453 Crystal Structure Of Sterol 14-Alpha Demethylase (C 6e-05
3eqm_A503 Crystal Structure Of Human Placental Aromatase Cyto 9e-05
2x2n_A475 X-Ray Structure Of Cyp51 From Trypanosoma Brucei In 2e-04
2q9f_A456 Crystal Structure Of Human Cytochrome P450 46a1 In 2e-04
2ve3_A444 Retinoic Acid Bound Cyanobacterial Cyp120a1 Length 4e-04
3p99_A453 Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma 4e-04
3gw9_A450 Crystal Structure Of Sterol 14-Alpha Demethylase (C 4e-04
3tik_A454 Sterol 14-Alpha Demethylase (Cyp51) From Trypanosom 4e-04
3g1q_A450 Crystal Structure Of Sterol 14-Alpha Demethylase (C 4e-04
2wv2_A475 X-Ray Structure Of Cyp51 From The Human Pathogen Tr 4e-04
3ebs_A476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 7e-04
4dvq_A483 Structure Of Human Aldosterone Synthase, Cyp11b2, I 7e-04
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome P4503a4-Bromoergocryptine Complex Length = 487 Back     alignment and structure 
Iteration: 1

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 95/434 (21%), Positives = 172/434 (39%), Gaps = 65/434 (14%)
Query: 2   GFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAF-RL 60
           GF  F     E H+KYG V   + G   +L +I +P +IK +L K         R F  +
Sbjct: 36  GFCMFD---MECHKKYGKVWGFYDGQQPVL-AITDPDMIKTVLVKECYSVFTNRRPFGPV 91
Query: 61  AFGQSSLFASTFDRVKKRRVTLS-TELNGRLLERGKVIPARVVDCLMERIHDILGKGN-I 118
            F +S++  +  +  K+ R  LS T  +G+L E   +I A+  D L+  +      G  +
Sbjct: 92  GFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPII-AQYGDVLVRNLRREAETGKPV 150
Query: 119 SCKMISQHMAFSLLGATIFG----------DEFFAWSKATVYEELFMTIAKDACFWASYS 168
           + K +    +  ++ +T FG          D F   +K  +  +          F+ S +
Sbjct: 151 TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFL------DPFFLSIT 204
Query: 169 VTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQR--NCKLISGMDHNFDNETAYKRMEAALG 226
           V PF         ++C   + +T  + +  +R    +L     H  D       ++  + 
Sbjct: 205 VFPFLI-PILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVD------FLQLMID 257
Query: 227 GSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIY 286
             +S +     E    L   E   ++I+  +F GY TT+ ++  I+  LATH D+Q+K+ 
Sbjct: 258 SQNSKET----ESHKALSDLELVAQSII-FIFAGYETTSSVLSFIMYELATHPDVQQKLQ 312
Query: 287 SEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLK------------- 333
            EI             +V  M  L   + E+ RL P    L+R   K             
Sbjct: 313 EEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGV 372
Query: 334 ---------HGNAEEYVDPRQ---SSFVLNDPNNNAAFL--PFGSGSRACVGQKYVTQGI 379
                    H + + + +P +     F   + +N   ++  PFGSG R C+G ++    +
Sbjct: 373 VVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNM 432
Query: 380 ATLFASLLERYEIR 393
                 +L+ +  +
Sbjct: 433 KLALIRVLQNFSFK 446
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4 Length = 486 Back     alignment and structure
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4 Length = 485 Back     alignment and structure
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51) From Trypanosoma Cruzi In Complex With A Potential Antichagasic Drug, Posaconazole Length = 458 Back     alignment and structure
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex With Fluconazole In Alternative Conformation Length = 473 Back     alignment and structure
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Cruzi In Complex With Inhibitor Fluconazole Length = 464 Back     alignment and structure
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In Complex With Chaps Length = 482 Back     alignment and structure
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51) From Leishmania Infantum In Complex With Fluconazole Length = 453 Back     alignment and structure
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome P450 In Complex With Androstenedione Length = 503 Back     alignment and structure
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In Complex With Posaconazole In Two Different Conformations Length = 475 Back     alignment and structure
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex With Cholesterol-3-Sulphate Length = 456 Back     alignment and structure
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 Length = 444 Back     alignment and structure
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei In Complex With Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol Length = 453 Back     alignment and structure
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4- Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl- 1,3, 4-Oxaziazol-2-Yl)benzamide Length = 450 Back     alignment and structure
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma Brucei In Complex With The Tipifarnib Derivative 6-((4-Chlorophenyl)(Methoxy)(1-Methyl- 1h-Imidazol-5-Yl)methyl)-4-(2, 6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One Length = 454 Back     alignment and structure
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma Brucei In Ligand Free State Length = 450 Back     alignment and structure
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen Trypanosoma Brucei In Complex With Fluconazole Length = 475 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In Complex With Deoxycorticosterone Length = 483 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query426
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 3e-33
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 1e-31
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 2e-30
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 2e-29
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 1e-28
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 6e-27
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 9e-27
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 3e-26
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 4e-26
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 5e-26
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 6e-26
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 3e-25
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 3e-19
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 4e-19
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 1e-16
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 8e-16
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 1e-15
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 7e-14
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 7e-12
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 9e-12
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 7e-09
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 2e-07
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 4e-07
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 2e-06
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 3e-06
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 5e-06
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 7e-06
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 8e-06
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 1e-05
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
 Score =  129 bits (327), Expect = 3e-33
 Identities = 62/438 (14%), Positives = 141/438 (32%), Gaps = 58/438 (13%)

Query: 6   FSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFRLAFG-- 63
                   +  YG  +++W+   +  + I + + +  ++           +      G  
Sbjct: 70  IGSACNYYNRVYGEFMRVWISG-EETLIISKSSSMFHIMKHNHYSSRFGSKLGLQCIGMH 128

Query: 64  -QSSLFASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGN-ISCK 121
            +  +F +  +  K  R      L+G  L R   + A  +   ++R+ ++  +   +   
Sbjct: 129 EKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVL 188

Query: 122 MISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQ 181
            + + +                 +     +  F              +       + +Y+
Sbjct: 189 TLLRRVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQA---LLIKPDIFFKISWLYKKYE 245

Query: 182 HLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSG 241
              + LK   + +I + +R              E   +              L+  E  G
Sbjct: 246 KSVKDLKDAIEVLIAEKRRR----------ISTEEKLEECMDFA------TELILAEKRG 289

Query: 242 YL---QAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGE 298
            L      +     I+ ++     T +  +  +L  +A H +++E I  EI   +  +GE
Sbjct: 290 DLTRENVNQC----ILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEI---QTVIGE 342

Query: 299 KD--QQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLN----- 351
           +D     +  + ++   IYES R  P    + R +L+    + Y   + ++ +LN     
Sbjct: 343 RDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMH 402

Query: 352 ------DPN-----------NNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRL 394
                  PN               F PFG G R C G+      +  +  +LL R+ ++ 
Sbjct: 403 RLEFFPKPNEFTLENFAKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKT 462

Query: 395 QPGSEKNPKPTVNNCVFQ 412
             G        +++    
Sbjct: 463 LQGQCVESIQKIHDLSLH 480
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query426
3mdm_A456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
3ld6_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
3nxu_A485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
3swz_A494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
3pm0_A507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
3qz1_A496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
2hi4_A495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
2ij2_A470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 100.0
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 100.0
3dax_A491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 100.0
3v8d_A491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 100.0
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 100.0
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 100.0
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 100.0
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 100.0
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 100.0
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 100.0
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 100.0
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 100.0
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 100.0
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 100.0
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 100.0
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 100.0
3b6h_A498 Prostacyclin synthase; enzyme-inhibitor complex, C 100.0
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 100.0
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 100.0
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 100.0
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 100.0
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 100.0
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 100.0
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 100.0
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 100.0
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 100.0
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 100.0
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 100.0
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 100.0
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 100.0
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 100.0
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 100.0
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 100.0
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 100.0
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 100.0
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 100.0
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 100.0
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 100.0
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 100.0
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 100.0
3b98_A475 Prostaglandin I2 synthase; prostacyclin synthase, 100.0
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 100.0
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 100.0
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 100.0
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 100.0
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 100.0
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 100.0
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 100.0
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 100.0
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 100.0
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 100.0
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 100.0
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 100.0
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 100.0
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-61  Score=459.88  Aligned_cols=396  Identities=18%  Similarity=0.210  Sum_probs=305.3

Q ss_pred             CchhHHHHHHHHHHHhCCeeEEeecCcceEEEecCHHHHHHHHHhcCCCCCcccccc--------ccccCCCCccc-cCc
Q 014343            2 GFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAF--------RLAFGQSSLFA-STF   72 (426)
Q Consensus         2 ~~~~~~~~~~~~~~~yG~v~~~~~g~~~~~v~v~~p~~i~~il~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~g   72 (426)
                      +...++..+.+|+++|||||++++|+.+. |+++||++++++|.++  .+...+...        ....| .+++. .+|
T Consensus         8 ~g~~~~~~~~~~~~kyG~v~~~~~~~~~~-vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~g   83 (456)
T 3mdm_A            8 GGRVLQDVFLDWAKKYGPVVRVNVFHKTS-VIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFG-QGLVSECNY   83 (456)
T ss_dssp             -CCCHHHHHHHHHHHHCSEEEEEETTEEE-EEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESST-TSTTTCCCH
T ss_pred             CcchHHHHHHHHHHHhCCeEEEEeCCCCE-EEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccC-CCcccCCCh
Confidence            44578999999999999999999999876 8899999999999643  222222111        11223 35555 589


Q ss_pred             hhHHHhhhcccccccHHHHhccCCchHHHHHHHHHHHHhhhC-CCceeHHHHHHHHHHHHHHHHhhCCCccccchh-hHH
Q 014343           73 DRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILG-KGNISCKMISQHMAFSLLGATIFGDEFFAWSKA-TVY  150 (426)
Q Consensus        73 ~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~~-~~~  150 (426)
                      +.|+++|+++++.|+.+.++.+.+.+.+.++.+++.+.+..+ +.++|+.+++..+++++++.++||.+++...+. ..+
T Consensus        84 ~~w~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~  163 (456)
T 3mdm_A           84 ERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPL  163 (456)
T ss_dssp             HHHHHHHHHHGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHH
T ss_pred             HHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHH
Confidence            999999999999999999999999999999999999987543 358999999999999999999999998654322 233


Q ss_pred             HHHHHHHHHhhh--hhcccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcCcchHHHHHHHhhhcCCC
Q 014343          151 EELFMTIAKDAC--FWASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGS  228 (426)
Q Consensus       151 ~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (426)
                      ...+..+.....  ......++|.+....+...+....+..+...+++++++..                  ........
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------------~~~~~~~~  225 (456)
T 3mdm_A          164 SQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREAL------------------KRGEEVPA  225 (456)
T ss_dssp             HHHHHHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HTTCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------hccccchh
Confidence            333332222111  1122223343222334445556666677777777765321                  11223456


Q ss_pred             CHHHHhhhcCCCCCCCCchhHHHHHHHHHHhchhchHHHHHHHHHHHhhChhHHHHHHHHHHHHhccCCCCChhhhhhhH
Q 014343          229 SSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNML  308 (426)
Q Consensus       229 d~~~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp  308 (426)
                      |+++.+++..  +..++++++.+++..+++||+|||+++++|++++|++||++|+||++||++++++++.++++++.+||
T Consensus       226 d~l~~ll~~~--~~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lp  303 (456)
T 3mdm_A          226 DILTQILKAE--EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQ  303 (456)
T ss_dssp             CHHHHHHHHT--SSCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCH
T ss_pred             hHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCH
Confidence            9999999743  34588999999999999999999999999999999999999999999999999988899999999999


Q ss_pred             hHHHHHHhhhccCCCCcccccccccCCCCc-cccCCCCC-------------------------CcccCCCCCCCccccc
Q 014343          309 LLLATIYESARLLPAGPFLQRCSLKHGNAE-EYVDPRQS-------------------------SFVLNDPNNNAAFLPF  362 (426)
Q Consensus       309 ~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~-g~~ip~gt-------------------------Rf~~~~~~~~~~~~~F  362 (426)
                      ||+|||+|+|||+|+++.+.|++. +|+.+ ||.|||||                         ||+++.......|+||
T Consensus       304 yl~a~i~E~lRl~p~~~~~~r~~~-~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~pF  382 (456)
T 3mdm_A          304 YLSQVLKESLRLYPPAWGTFRLLE-EETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYFPF  382 (456)
T ss_dssp             HHHHHHHHHHHHCCSSCCEEEEEC-SCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSCCCSSSCCTT
T ss_pred             HHHHHHHHHHHhCCCccccccccC-CceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCCCCCCcccCC
Confidence            999999999999999999888775 78888 99999999                         8877654456789999


Q ss_pred             CCCCCCCcCcHHHHHHHHHHHHHHHhhceeeeCCCCCCCCCCCCCCcccccCCCCceeeeecc
Q 014343          363 GSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCPEIDFVERV  425 (426)
Q Consensus       363 g~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~R~  425 (426)
                      |+|+|.|+|++||++|++++++.|+++|+|+++++.+....   ....+.+..+.+|++++|+
T Consensus       383 g~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~r~  442 (456)
T 3mdm_A          383 SLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQ---EQATLKPLDPVLCTLRPRG  442 (456)
T ss_dssp             CCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCCCCEE---ESSSEEESSCCEEEEEECC
T ss_pred             CCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcceee---cceEEecCCCeEEEEEEcC
Confidence            99999999999999999999999999999999876443221   1122222223389999886
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 426
d1tqna_472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 1e-27
d1po5a_465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 2e-26
d3czha1463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 2e-23
d2ij2a1453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 7e-23
d1r9oa_467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 2e-20
d2ciba1445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 7e-18
d1izoa_411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 6e-17
d1n97a_385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 8e-14
d1q5da_401 a.104.1.1 (A:) Cytochrome P450epok {Sorangium cell 4e-09
d1odoa_401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 6e-09
d1jfba_399 a.104.1.1 (A:) Cytochrome P450-NOR, nitric reducta 2e-08
d1z8oa1402 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharo 2e-07
d1ue8a_367 a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodai 6e-07
d1gwia_403 a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyce 1e-06
d1re9a_404 a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas pu 2e-06
d1lfka_394 a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatops 5e-06
d1cpta_428 a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas s 6e-06
d1ueda_403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 6e-06
d1s1fa_399 a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [ 3e-05
d1io7a_366 a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfata 4e-05
d1n40a_395 a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {My 4e-05
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome P450 3a4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (279), Expect = 1e-27
 Identities = 77/431 (17%), Positives = 145/431 (33%), Gaps = 36/431 (8%)

Query: 6   FSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAFR-LAFGQ 64
           F     E H+KYG V   + G   +L  I +P +IK +L K         R F  + F +
Sbjct: 30  FCMFDMECHKKYGKVWGFYDGQQPVLA-ITDPDMIKTVLVKECYSVFTNRRPFGPVGFMK 88

Query: 65  SSLFASTFDRVKKRRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGN-ISCKMI 123
           S++  +  +  K+ R  LS       L+    I A+  D L+  +      G  ++ K +
Sbjct: 89  SAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDV 148

Query: 124 SQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQHL 183
               +  ++ +T FG    +               ++      +     +      +  L
Sbjct: 149 FGAYSMDVITSTSFGVNIDSL------NNPQDPFVENTKKLLRFDFLDPFFLSITVFPFL 202

Query: 184 CEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSGYL 243
              L+ L   +  +   N    S            ++                +  S   
Sbjct: 203 IPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKA 262

Query: 244 QAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQS 303
            +  E     +  +F GY TT+ ++  I+  LATH D+Q+K+  EI             +
Sbjct: 263 LSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDT 322

Query: 304 VDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLN------------ 351
           V  M  L   + E+ RL P    L+R   K         P+    ++             
Sbjct: 323 VLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWT 382

Query: 352 DPN---------------NNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQP 396
           +P                +   + PFGSG R C+G ++    +      +L+ +  +   
Sbjct: 383 EPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCK 442

Query: 397 GSEKNPKPTVN 407
            ++   K ++ 
Sbjct: 443 ETQIPLKLSLG 453
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Length = 401 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Length = 399 Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Length = 402 Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Length = 367 Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 403 Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Length = 404 Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Length = 394 Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Length = 428 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Length = 399 Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 366 Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 395 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query426
d2ij2a1453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d2ciba1445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d1tqna_472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d1r9oa_467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 100.0
d3czha1463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 100.0
d1po5a_465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 100.0
d1izoa_411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 100.0
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 100.0
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 100.0
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 100.0
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 100.0
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 100.0
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 100.0
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 100.0
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 100.0
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 100.0
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 100.0
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 100.0
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 100.0
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 100.0
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 100.0
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.1e-61  Score=455.28  Aligned_cols=393  Identities=16%  Similarity=0.189  Sum_probs=311.6

Q ss_pred             chhHHHHHHHHHHHhCCeeEEeecCcceEEEecCHHHHHHHHHhcCCCCCccc--cccccccCCCCccc--cCchhHHHh
Q 014343            3 FICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTG--RAFRLAFGQSSLFA--STFDRVKKR   78 (426)
Q Consensus         3 ~~~~~~~~~~~~~~yG~v~~~~~g~~~~~v~v~~p~~i~~il~~~~~~~~~~~--~~~~~~~~~~~~~~--~~g~~w~~~   78 (426)
                      -.++++++.+|+++|||||++++|+.++ |+++||+.|++++.++...+....  .......| .+++.  .+|+.|+.+
T Consensus        20 ~~~~~~~~~~~~~kyG~if~~~~~~~~~-vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~g~~wk~~   97 (453)
T d2ij2a1          20 TDKPVQALMKIADELGEIFKFEAPGRVT-RYLSSQRLIKEACDESRFDKNLSQALKFVRDFAG-DGLFTSWTHEKNWKKA   97 (453)
T ss_dssp             SSCHHHHHHHHHHHHCSEEEEEETTEEE-EEECCHHHHHHHTCTTTEEECCCHHHHHHHHHHT-TSGGGSCTTSHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCEEEEEeCCceE-EEECCHHHHHHHHhcCCcccccccHhHHHHHhcC-CcEEecCCChHHHHHH
Confidence            4568999999999999999999999986 789999999999966443222211  11223344 36554  578999999


Q ss_pred             hhcccccccHHHHhccCCchHHHHHHHHHHHHhhhCCCceeHHHHHHHHHHHHHHHHhhCCCccccch---hhHHHHHHH
Q 014343           79 RVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKGNISCKMISQHMAFSLLGATIFGDEFFAWSK---ATVYEELFM  155 (426)
Q Consensus        79 R~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~~~~~~~fG~~~~~~~~---~~~~~~~~~  155 (426)
                      |+++.+.|+++.++.+.+.+.++++.+++.+.+..+++++|+.+++..+++++++.++||.+++....   ...+.....
T Consensus        98 Rk~l~~~fs~~~l~~~~~~i~~~~~~li~~l~~~~~~~~idl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  177 (453)
T d2ij2a1          98 HNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVR  177 (453)
T ss_dssp             HHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCSSCCHHHHHHHH
T ss_pred             HHHHHHHhhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCccchHHHHHHHhhhcchhcccccccchhhhccchHHHHhhhh
Confidence            99999999999999999999999999999998766677999999999999999999999998754321   123344443


Q ss_pred             HHHHhhhh-hcccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcCcchHHHHHHHhhhcCCCCHHHHh
Q 014343          156 TIAKDACF-WASYSVTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDAL  234 (426)
Q Consensus       156 ~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l  234 (426)
                      .+...... .......+.+....+++.+..+.+..+++..++++.                      ...+...|+++.+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~----------------------~~~~~~~d~l~~l  235 (453)
T d2ij2a1         178 ALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRK----------------------ASGEQSDDLLTHM  235 (453)
T ss_dssp             HHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HHCCCCSSHHHHH
T ss_pred             ccchhhhhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhhc----------------------cccccccchhhhh
Confidence            33322211 111222333444455666677777777777776655                      3345667999999


Q ss_pred             hhc--CCCCCCCCchhHHHHHHHHHHhchhchHHHHHHHHHHHhhChhHHHHHHHHHHHHhccCCCCChhhhhhhHhHHH
Q 014343          235 VSQ--EPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLA  312 (426)
Q Consensus       235 l~~--~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a  312 (426)
                      +..  ...+..++++++..+++.+++||++||++++.|++++|+.||++|+++++|++++.+. ..++.+++.++|||+|
T Consensus       236 l~~~~~~~~~~ls~~ei~~~~~~~l~ag~~tta~~l~~~l~~L~~~p~~~~~~~~e~~~~~~~-~~~~~~~l~~~p~L~a  314 (453)
T d2ij2a1         236 LNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-PVPSYKQVKQLKYVGM  314 (453)
T ss_dssp             HHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-SSCCHHHHHTCHHHHH
T ss_pred             hhhcccccCcchhhhHHHhhhccccccccccchhhhhcchhhhhcccccchhhhhhhhhhhcc-ccCChhhhhcCCcchh
Confidence            872  3445679999999999999999999999999999999999999999999999998764 4679999999999999


Q ss_pred             HHHhhhccCCCCcccccccccCCCCc-cccCCCCC--------------------------CcccCCCCCCCcccccCCC
Q 014343          313 TIYESARLLPAGPFLQRCSLKHGNAE-EYVDPRQS--------------------------SFVLNDPNNNAAFLPFGSG  365 (426)
Q Consensus       313 ~i~E~lRl~p~~~~~~r~~~~~~~~~-g~~ip~gt--------------------------Rf~~~~~~~~~~~~~Fg~G  365 (426)
                      ||+||+|++|+++...|+++.+++.. ||.|||||                          ||++++......|+|||+|
T Consensus       315 ~i~E~lR~~p~~~~~~r~~~~~~~~~~~~~ip~g~~v~~~~~~~~~d~~~~~~dp~~F~PeRfl~~~~~~~~~~~pFG~G  394 (453)
T d2ij2a1         315 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNG  394 (453)
T ss_dssp             HHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGGSSGGGSCTTSCCTTCCG
T ss_pred             hhhhhhcccccccccccccccccccCCcceeecccccccchhhcccChhhcCCchhhcCccccCCCCCCCCCcccCCCCC
Confidence            99999999999999999887666666 89999999                          8887765567889999999


Q ss_pred             CCCCcCcHHHHHHHHHHHHHHHhhceeeeCCCCCCCCCCCCCCcccccCCCC-ceeeeecc
Q 014343          366 SRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCP-EIDFVERV  425 (426)
Q Consensus       366 ~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~-~i~~~~R~  425 (426)
                      +|+|+|++||++|++++++.||++|||++.++.+.++     ...+...|++ +|++++|.
T Consensus       395 ~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~-----~~~~~~~p~~~~v~~~~R~  450 (453)
T d2ij2a1         395 QRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDI-----KETLTLKPEGFVVKAKSKK  450 (453)
T ss_dssp             GGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCE-----EESSSEEETTCEEEEEECC
T ss_pred             CccChhHHHHHHHHHHHHHHHHHhCEEEeCCCCccCc-----eeeeEEccCCeEEEEEECC
Confidence            9999999999999999999999999999987655433     2233334555 99999995
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure